BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006071
         (662 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 753

 Score = 1086 bits (2808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/662 (78%), Positives = 586/662 (88%), Gaps = 1/662 (0%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           MA R WTTRLQN IR LVP FDH+LVYNVLH A+NSEHALQFFRWVERAGLF +DR+TH+
Sbjct: 87  MANRPWTTRLQNSIRNLVPHFDHSLVYNVLHAARNSEHALQFFRWVERAGLFKNDRDTHM 146

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K+IEILGR  KLNHARCILLDMPKKGV+WDE MF VLIESYGK GIVQE+VKIF+ M +L
Sbjct: 147 KIIEILGRASKLNHARCILLDMPKKGVEWDEYMFVVLIESYGKAGIVQEAVKIFNKMNEL 206

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           GVERS+KSYDALFK+ILRRGRYMMAKR FNKML++GI+PTRHTYN+MLWGFFLSL+LETA
Sbjct: 207 GVERSIKSYDALFKVILRRGRYMMAKRVFNKMLNDGIQPTRHTYNIMLWGFFLSLRLETA 266

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +RF++DMK+RGIS DVVTYNTMING+ RFKKM+EAEKLF EMK KNI PTVISYTTMIKG
Sbjct: 267 MRFYDDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTVISYTTMIKG 326

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           YVAV+R DD LR+ +EMKSF++KPN  TY+ LLPGLCDA KM E + +L EMV R++ PK
Sbjct: 327 YVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAPK 386

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           DNS+F++LL  QCK+G L AA DVL  M+RL IPTEAGHYG+LIENFCKAE YDRA+K L
Sbjct: 387 DNSIFLRLLSCQCKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEEYDRAVKYL 446

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           DKL+EKEIILRPQSTL++E+++YNPMIQ+LC +GQTGKAEIFFRQLMKKGV DP+AFNNL
Sbjct: 447 DKLIEKEIILRPQSTLEIESNAYNPMIQYLCSHGQTGKAEIFFRQLMKKGVQDPLAFNNL 506

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I GH+KEG PDSAFEI KIMG+RGVPRDADAY  +IESYLRKGEPADAKTALD M+EDGH
Sbjct: 507 ICGHAKEGYPDSAFEIFKIMGKRGVPRDADAYRLIIESYLRKGEPADAKTALDGMLEDGH 566

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P  S+FRSVMESLFEDGRVQTASRVMKSMVEKGVKEN+DLV KILEALLMRGHVEEALG
Sbjct: 567 VPDPSVFRSVMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMRGHVEEALG 626

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           RI+L+MQSG   NFD LLSVLSEKGKTIAA+KLLDF L RD  +D  SY+KVLDALLAAG
Sbjct: 627 RIELLMQSGFHVNFDDLLSVLSEKGKTIAALKLLDFALERDFNLDFKSYDKVLDALLAAG 686

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR-GEMSRGSQKEK 659
           KTLNAYSIL KIM+KGGV+DW SS  LI  LNQEGNTKQADILSRMI+ GE S  ++K K
Sbjct: 687 KTLNAYSILCKIMQKGGVSDWSSSKDLIKSLNQEGNTKQADILSRMIKGGEKSHENKKGK 746

Query: 660 KQ 661
           KQ
Sbjct: 747 KQ 748


>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
          Length = 772

 Score = 1081 bits (2796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/662 (77%), Positives = 586/662 (88%), Gaps = 1/662 (0%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           MA RAWTTRLQN IR+LVPQFDH+LV+NVLHG++NS+HALQFFRWVERAGLF HDR+THL
Sbjct: 97  MANRAWTTRLQNSIRSLVPQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHL 156

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K+IEILGR  KLNHARCILLDMPKKGV+WDED+F +LI+SYGK GIVQESVK+F  MK+L
Sbjct: 157 KIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKEL 216

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           GVER++KSYDALFK+ILRRGRYMMAKRYFN ML+EG+ PT HTYN+M+WGFFLSLK+ETA
Sbjct: 217 GVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETA 276

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            RFFE+MK R IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTVISYTTMIKG
Sbjct: 277 NRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKG 336

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           YV+V R DD LR+F+EMKSF +KPNAVTY+ LLPGLCD  KM+E Q V++EMVERYI PK
Sbjct: 337 YVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPK 396

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           DNS+FM+L+  QCK+G L+AAADVLKAMIRLSIPTEAGHYG+LIENFCK+ +YDRA+KLL
Sbjct: 397 DNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLL 456

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           DKL+EKEIILRPQ++L+ME+S YN +I++LC++GQT KAE  FRQLMKKGV DP+AFNNL
Sbjct: 457 DKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNL 516

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           IRGHSKEG P+SAFEI+KIMGRR VPR+ADAY  LIES+L+KGEPADAKTALD MIE+GH
Sbjct: 517 IRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGH 576

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P SSLFRSVMESLFEDGR+QTASRVM +MVEKGVKEN+DLVAKILEALL+RGHVEEALG
Sbjct: 577 IPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALG 636

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           RIDL+M +G  P+FD LLSVL  KGKTIAA+KLLDF L RD  I  +SYE VLDALL AG
Sbjct: 637 RIDLLMNNGCEPDFDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAG 696

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMS-RGSQKEK 659
           KTLNAYSIL KIM+KGG TDW S   LI  LN+EGNTKQADILSRMI+GE    GS+K K
Sbjct: 697 KTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADILSRMIKGEEKVHGSKKGK 756

Query: 660 KQ 661
           KQ
Sbjct: 757 KQ 758


>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
           [Vitis vinifera]
          Length = 763

 Score = 1080 bits (2792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/662 (77%), Positives = 586/662 (88%), Gaps = 1/662 (0%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           MA RAWTTRLQN IR+LVPQFDH+LV+NVLHG++NS+HALQFFRWVERAGLF HDR+THL
Sbjct: 97  MANRAWTTRLQNSIRSLVPQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHL 156

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K+IEILGR  KLNHARCILLDMPKKGV+WDED+F +LI+SYGK GIVQESVK+F  MK+L
Sbjct: 157 KIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKEL 216

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           GVER++KSYDALFK+ILRRGRYMMAKRYFN ML+EG+ PT HTYN+M+WGFFLSLK+ETA
Sbjct: 217 GVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETA 276

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            RFFE+MK R IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTVISYTTMIKG
Sbjct: 277 NRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKG 336

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           YV+V R DD LR+F+EMKSF +KPNAVTY+ LLPGLCD  KM+E Q V++EMVERYI PK
Sbjct: 337 YVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPK 396

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           DNS+FM+L+  QCK+G L+AAADVLKAMIRLSIPTEAGHYG+LIENFCK+ +YDRA+KLL
Sbjct: 397 DNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLL 456

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           DKL+EKEIILRPQ++L+ME+S YN +I++LC++GQT KAE  FRQLMKKGV DP+AFNNL
Sbjct: 457 DKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNL 516

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           IRGHSKEG P+SAFEI+KIMGRR VPR+ADAY  LIES+L+KGEPADAKTALD MIE+GH
Sbjct: 517 IRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGH 576

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P SSLFRSVMESLFEDGR+QTASRVM +MVEKGVKEN+DLVAKILEALL+RGHVEEALG
Sbjct: 577 IPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALG 636

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           RIDL+M +G  P+FD LLSVL  KGKTIAA+KLLDF L RD  I  +SYE VLDALL AG
Sbjct: 637 RIDLLMNNGCEPDFDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAG 696

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMS-RGSQKEK 659
           KTLNAYSIL KIM+KGG TDW S   LI  LN+EGNTKQADILSRMI+GE    GS+K K
Sbjct: 697 KTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADILSRMIKGEEKVHGSKKGK 756

Query: 660 KQ 661
           KQ
Sbjct: 757 KQ 758


>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Cucumis sativus]
          Length = 760

 Score = 1063 bits (2748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/657 (77%), Positives = 569/657 (86%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           MA R WTTRLQN IR+LVPQFDHNLVYNVLH AK SEHAL FFRWVERAGLF HDRETH 
Sbjct: 99  MANREWTTRLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHF 158

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K+IEILGR  KLNHARCILLDMP KGVQWDED+F VLIESYGK GIVQE+VKIF  MK+L
Sbjct: 159 KIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKEL 218

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           GVERSVKSYDALFK I+RRGRYMMAKRYFN ML+EGIEP RHTYNVMLWGFFLSL+LETA
Sbjct: 219 GVERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETA 278

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            RF+EDMKSRGIS DVVTYNTMINGY RFK M+EAE+ F EMK KNI PTVISYTTMIKG
Sbjct: 279 KRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKG 338

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           YV+V RADDALR+F+EMK+   KPN +TY+ LLPGLCDA K+ E +K+L EMV R+  PK
Sbjct: 339 YVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPK 398

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           DNS+FM+LL  QCK G L+AA  VLKAMIRLSIPTEAGHYGILIEN CKA MYD+A+KLL
Sbjct: 399 DNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLL 458

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           + LVEKEIILRPQSTL+MEAS+YN +IQ+LC++GQTGKA+ FFRQL+KKG+ D VAFNNL
Sbjct: 459 ENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNL 518

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           IRGH+KEGNPD AFE++KIMGRRGV RDA++Y  LI+SYL KGEPADAKTALDSMIE+GH
Sbjct: 519 IRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGH 578

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           SP S+LFRSVMESLF DGRVQTASRVM SM++KG+ ENLDLVAKILEAL MRGH EEALG
Sbjct: 579 SPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALG 638

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           RI+L+M     P+F+SLLSVL EKGKT +A KLLDF L R+C I+ +SYEKVLDALL AG
Sbjct: 639 RINLLMNCNCPPDFNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAG 698

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
           KTLNAY+IL KIMEKGG  DW S D LI  LNQEGNTKQADILSRMI+G   + S+K
Sbjct: 699 KTLNAYAILCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQADILSRMIKGGDRKRSKK 755


>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37230-like [Cucumis sativus]
          Length = 760

 Score = 1062 bits (2747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/657 (77%), Positives = 569/657 (86%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           MA R WTTRLQN IR+LVPQFDHNLVYNVLH AK SEHAL FFRWVERAGLF HDRETH 
Sbjct: 99  MANREWTTRLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHF 158

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K+IEILGR  KLNHARCILLDMP KGVQWDED+F VLIESYGK GIVQE+VKIF  MK+L
Sbjct: 159 KIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKEL 218

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           GVERSVKSYDALFK I+RRGRYMMAKRYFN ML+EGIEP RHTYNVMLWGFFLSL+LETA
Sbjct: 219 GVERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETA 278

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            RF+EDMKSRGIS DVVTYNTMINGY RFK M+EAE+ F EMK KNI PTVISYTTMIKG
Sbjct: 279 KRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKG 338

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           YV+V RADDALR+F+EMK+   KPN +TY+ LLPGLCDA K+ E +K+L EMV R+  PK
Sbjct: 339 YVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPK 398

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           DNS+FM+LL  QCK G L+AA  VLKAMIRLSIPTEAGHYGILIEN CKA MYD+A+KLL
Sbjct: 399 DNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLL 458

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           + LVEKEIILRPQSTL+MEAS+YN +IQ+LC++GQTGKA+ FFRQL+KKG+ D VAFNNL
Sbjct: 459 ENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNL 518

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           IRGH+KEGNPD AFE++KIMGRRGV RDA++Y  LI+SYL KGEPADAKTALDSMIE+GH
Sbjct: 519 IRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGH 578

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           SP S+LFRSVMESLF DGRVQTASRVM SM++KG+ ENLDLVAKILEAL MRGH EEALG
Sbjct: 579 SPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALG 638

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           RI+L+M     P+F+SLLSVL EKGKT +A KLLDF L R+C I+ +SYEKVLDALL AG
Sbjct: 639 RINLLMNCNCPPDFNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAG 698

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
           KTLNAY+IL KIMEKGG  DW S D LI  LNQEGNTKQADILSRMI+G   + S+K
Sbjct: 699 KTLNAYAILCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQADILSRMIKGGDRKRSKK 755


>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
 gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
          Length = 760

 Score = 1057 bits (2733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/663 (76%), Positives = 578/663 (87%), Gaps = 1/663 (0%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           MA R WTTRLQN IRALVP+FDH+LVYNVLHGA+  +HALQFFRWVERAGL  HDRETH+
Sbjct: 93  MANRDWTTRLQNSIRALVPEFDHSLVYNVLHGARKPDHALQFFRWVERAGLIQHDRETHM 152

Query: 61  KMIEILGRVGKLNHARCILL-DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
           K+I+ILGR   LNHARCI+L DMPKKG + DEDMF +LI+SYGK GIVQESVK+F  MK+
Sbjct: 153 KIIQILGRYSMLNHARCIVLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKE 212

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LGVERSVKSY+ALFK+I+R+GRYMMAKR+FNKML EGI PTRHTYNV++WGFFLS++L T
Sbjct: 213 LGVERSVKSYNALFKVIVRKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRT 272

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+RF+EDMK RGIS DVVTYNTMINGY R K+M+EAEKLFAEMK K+I PTVISYTTMIK
Sbjct: 273 AVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIK 332

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY AV+R +D LR+ +EMKS  +KPN VTYT LLP LCDAGKM E + +L+EMV R I P
Sbjct: 333 GYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIAP 392

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
           KDNS+F+KLL  QCK+G L AA DVL  MI+LSIP+EAGHYG+LIENFCKAE YD+A+K 
Sbjct: 393 KDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQAVKF 452

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN 419
           +DKL+E +IILRPQSTL+ME+ +YNP+IQ+LC +GQTGKAEI FRQL+KKGV DP+AFNN
Sbjct: 453 VDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVEDPLAFNN 512

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI GH+KEG PDSAFEI+KIMGR+G+PRDADAY  LIESYLRKGEPADAKTALDSMIEDG
Sbjct: 513 LICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDG 572

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           H P SS+FRSVMESL+EDGRVQTASRVMKSMVEKGVKEN+DLVAKILEALLMRGH EEAL
Sbjct: 573 HLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEAL 632

Query: 540 GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
           GRIDL+M S    NFDSLLS+LSEKGKTIAA+KLLDF L RDC ID  SY+KVLDALLAA
Sbjct: 633 GRIDLLMSSQCNVNFDSLLSILSEKGKTIAALKLLDFGLQRDCDIDFKSYDKVLDALLAA 692

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKEK 659
           GKTLNAYSIL KIMEKGGVT W+S + LI  LNQEGNTKQADILSRMI+G+      K+ 
Sbjct: 693 GKTLNAYSILCKIMEKGGVTSWRSYEDLIKSLNQEGNTKQADILSRMIKGDDKSHENKKG 752

Query: 660 KQK 662
           K+K
Sbjct: 753 KKK 755


>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 756

 Score = 1022 bits (2643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/650 (73%), Positives = 565/650 (86%), Gaps = 2/650 (0%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           M  RAWTTRLQN IR LVP++DH+LVYNVLHGAK  EHALQFFRW ER+GL  HDR+TH+
Sbjct: 94  MDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHM 153

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           KMI++LG V KLNHARCILLDMP+KGV WDEDMF VLIESYGK GIVQESVKIF  MK L
Sbjct: 154 KMIKMLGEVQKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDL 213

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           GVER++KSY+ LFK+ILRRGRYMMAKRYFNKM+SEG+EPTRHTYN+MLWGFFLSL+LETA
Sbjct: 214 GVERTIKSYNTLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETA 273

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +RFF+DMK+RGIS D VTYNT+INGY RFKKMDEAEKLF EMK  N EP+V++YTTMIKG
Sbjct: 274 LRFFDDMKTRGISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKG 333

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y++V+R DD LRIF+EM+SF ++PNA TY+ LLPGLCD GKMVE + +L+ M+ ++I PK
Sbjct: 334 YLSVDRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPK 393

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           DNS+F+KLL  Q K+G + AA +VLKAM  L++P EAGHYG+LIEN CKA  Y+RAIKLL
Sbjct: 394 DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLL 453

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           D L+EKEIILR Q TL+ME S+YNP+I++LC+NGQT KAE+ FRQLMK+GV D  A NNL
Sbjct: 454 DTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNL 513

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           IRGH+KEGNP+S++EI+KIM RRGVPR+A+AY  LI+SY+ KGEP DAKTALDSM+EDGH
Sbjct: 514 IRGHAKEGNPESSYEILKIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDGH 573

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEK--GVKENLDLVAKILEALLMRGHVEEA 538
            P S+LFRSV+ESLFEDGRVQTASRVM  M++K  G+++N+DL+AKILEALLMRGHVEEA
Sbjct: 574 VPDSALFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEA 633

Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
           LGRIDL+ Q+G   + DSLLSVLSEKGKTIAA+KLLDF L RD  +D +SY+KVLDALL 
Sbjct: 634 LGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLDFSSYDKVLDALLG 693

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           AGKTLNAYS+L KIMEKG  TDWKSSD+LI  LNQEGNTKQAD+LSRMI+
Sbjct: 694 AGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQADVLSRMIK 743


>gi|15228104|ref|NP_181260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216851|sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
 gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
 gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
 gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
 gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 757

 Score = 1019 bits (2636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/650 (73%), Positives = 564/650 (86%), Gaps = 2/650 (0%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           M  RAWTTRLQN IR LVP++DH+LVYNVLHGAK  EHALQFFRW ER+GL  HDR+TH+
Sbjct: 95  MDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHM 154

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           KMI++LG V KLNHARCILLDMP+KGV WDEDMF VLIESYGK GIVQESVKIF  MK L
Sbjct: 155 KMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDL 214

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           GVER++KSY++LFK+ILRRGRYMMAKRYFNKM+SEG+EPTRHTYN+MLWGFFLSL+LETA
Sbjct: 215 GVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETA 274

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +RFFEDMK+RGIS D  T+NTMING+ RFKKMDEAEKLF EMK   I P+V+SYTTMIKG
Sbjct: 275 LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKG 334

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y+AV+R DD LRIF+EM+S  ++PNA TY+ LLPGLCDAGKMVE + +L+ M+ ++I PK
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPK 394

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           DNS+F+KLL  Q K+G + AA +VLKAM  L++P EAGHYG+LIEN CKA  Y+RAIKLL
Sbjct: 395 DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLL 454

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           D L+EKEIILR Q TL+ME S+YNP+I++LC+NGQT KAE+ FRQLMK+GV D  A NNL
Sbjct: 455 DTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNL 514

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           IRGH+KEGNPDS++EI+KIM RRGVPR+++AY  LI+SY+ KGEP DAKTALDSM+EDGH
Sbjct: 515 IRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGH 574

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEK--GVKENLDLVAKILEALLMRGHVEEA 538
            P SSLFRSV+ESLFEDGRVQTASRVM  M++K  G+++N+DL+AKILEALLMRGHVEEA
Sbjct: 575 VPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEA 634

Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
           LGRIDL+ Q+G   + DSLLSVLSEKGKTIAA+KLLDF L RD  ++ +SY+KVLDALL 
Sbjct: 635 LGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLG 694

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           AGKTLNAYS+L KIMEKG  TDWKSSD+LI  LNQEGNTKQAD+LSRMI+
Sbjct: 695 AGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQADVLSRMIK 744


>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Glycine max]
          Length = 733

 Score = 1010 bits (2612), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/665 (73%), Positives = 567/665 (85%), Gaps = 3/665 (0%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           M+ RAWTTRLQN IR+LVP+FD +LVYNVLHGA + EHALQF+RWVERAGLF H  ET L
Sbjct: 64  MSNRAWTTRLQNSIRSLVPEFDPSLVYNVLHGAASPEHALQFYRWVERAGLFTHTPETTL 123

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQ---WDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           K+++ILGR  KLNHARCIL +  + GV      ED F  LI+SYG+ GIVQESVK+F  M
Sbjct: 124 KIVQILGRYSKLNHARCILFNDTRGGVSRAAVTEDAFVSLIDSYGRAGIVQESVKLFKKM 183

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+LG++R+VKSYDALFK+ILRRGRYMMAKRY+N ML EG++PTRHT+N++LWG FLSL+L
Sbjct: 184 KELGLDRTVKSYDALFKVILRRGRYMMAKRYYNAMLLEGVDPTRHTFNILLWGMFLSLRL 243

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           +TA+RF+EDMKSRGI  DVVTYNT+INGY RFKK+DEAEKLF EMK ++I P VIS+TTM
Sbjct: 244 DTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVISFTTM 303

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +KGYVA  R DDAL++F+EMK   VKPN VT++ LLPGLCDA KM E + VL EMVERYI
Sbjct: 304 LKGYVAAGRIDDALKVFEEMKGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEMVERYI 363

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            PKDN++FMK++  QCK+G L+AAADVLKAM+RLSIPTEAGHYG+LIE+FCKA +YD+A 
Sbjct: 364 APKDNALFMKMMSCQCKAGDLDAAADVLKAMVRLSIPTEAGHYGVLIESFCKANVYDKAE 423

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           KLLDKL+EKEI+LRPQ+  +ME S+YN MI +LC +G+TGKAE FFRQL+KKGV D VAF
Sbjct: 424 KLLDKLIEKEIVLRPQNDSEMEPSAYNLMIGYLCEHGRTGKAETFFRQLLKKGVQDSVAF 483

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           NNLIRGHSKEGNPDSAFEI+KIMGRRGV RD D+Y  LIESYLRKGEPADAKTALD M+E
Sbjct: 484 NNLIRGHSKEGNPDSAFEIMKIMGRRGVARDVDSYRLLIESYLRKGEPADAKTALDGMLE 543

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            GH P SSL+RSVMESLF+DGRVQTASRVMKSMVEKG KEN+DLV KILEALL+RGHVEE
Sbjct: 544 SGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGAKENMDLVLKILEALLLRGHVEE 603

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           ALGRIDL+M +G  P+FD LLSVL EK KTIAA+KLLDF L RDCIID + Y+KVLDALL
Sbjct: 604 ALGRIDLLMHNGCEPDFDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALL 663

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
           AAGKTLNAYSIL KI+EKGG TDW S D+LI  LNQEGNTKQAD+LSRMI+G   R  ++
Sbjct: 664 AAGKTLNAYSILCKILEKGGSTDWSSRDELIKSLNQEGNTKQADVLSRMIKGTDGRTLRR 723

Query: 658 EKKQK 662
             K+K
Sbjct: 724 GGKRK 728


>gi|356528212|ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Glycine max]
          Length = 738

 Score = 1003 bits (2592), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/657 (73%), Positives = 560/657 (85%), Gaps = 8/657 (1%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           M+ RAWTTRLQN IR+LVP+FD +LVYNVLHGA + EHALQF+RWVERAGLF H  ET L
Sbjct: 64  MSNRAWTTRLQNSIRSLVPEFDPSLVYNVLHGAASPEHALQFYRWVERAGLFTHTPETTL 123

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQ---WDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           K+++ILGR  KLNHARCIL D  + G       ED F  LI+SYG+ GIVQESVK+F  M
Sbjct: 124 KIVQILGRYSKLNHARCILFDDTRGGASRATVTEDAFVSLIDSYGRAGIVQESVKLFKKM 183

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+LGV+R+VKSYDALFK+ILRRGRYMMAKRY+N ML+E +EPTRHTYN++LWG FLSL+L
Sbjct: 184 KELGVDRTVKSYDALFKVILRRGRYMMAKRYYNAMLNESVEPTRHTYNILLWGMFLSLRL 243

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           +TA+RF+EDMKSRGI  DVVTYNT+INGY RFKK++EAEKLF EMK ++I P VIS+TTM
Sbjct: 244 DTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVEEAEKLFVEMKGRDIVPNVISFTTM 303

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +KGYVA  + DDAL++F+EMK   VKPNAVT++ LLPGLCDA KM E + VL EMVERYI
Sbjct: 304 LKGYVAAGQIDDALKVFEEMKGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEMVERYI 363

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            PKDN+VFMKL+  QCK+G L+AA DVLKAMIRLSIPTEAGHYG+LIENFCKA +YD+A 
Sbjct: 364 APKDNAVFMKLMSCQCKAGDLDAAGDVLKAMIRLSIPTEAGHYGVLIENFCKANLYDKAE 423

Query: 358 KLLDKLVEKEIILRPQST-----LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           KLLDK++EKEI+LR ++       +ME S+YN MI +LC +G+TGKAE FFRQLMKKGV 
Sbjct: 424 KLLDKMIEKEIVLRQKNAYETELFEMEPSAYNLMIGYLCEHGRTGKAETFFRQLMKKGVQ 483

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D V+FNNLI GHSKEGNPDSAFEI+KIMGRRGV RDAD+Y  LIESYLRKGEPADAKTAL
Sbjct: 484 DSVSFNNLICGHSKEGNPDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTAL 543

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D M+E GH P SSL+RSVMESLF+DGRVQTASRVMKSMVEKGVKEN+DLV+K+LEALLMR
Sbjct: 544 DGMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMR 603

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           GHVEEALGRI L+M +G  P+FD LLSVL EK KTIAA+KLLDF L RDCIID + Y+KV
Sbjct: 604 GHVEEALGRIHLLMLNGCEPDFDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKV 663

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
           LDALLAAGKTLNAYSIL KI+EKGG TDW S D+LI  LNQEGNTKQAD+LSRMI+G
Sbjct: 664 LDALLAAGKTLNAYSILCKILEKGGSTDWSSRDELIKSLNQEGNTKQADVLSRMIKG 720


>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 484

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/484 (73%), Positives = 423/484 (87%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHGAKNSEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+I+RRGR+MMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DV+TYNTMINGY R KKM+EAEK F EMK KNIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK + +KPNA+TY+ LLPGLC+A KM E + +L+EMV++YI P DNS+FM+L+  
Sbjct: 241 RLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK G+L+AAADVLKAMIRLS+PTEAGHYG+LIEN+CKA  YD+A+KLLDKL+EK+II+R
Sbjct: 301 HCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME S+YNP++++LC+NGQT KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPADAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 97/484 (20%), Positives = 204/484 (42%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVL 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI   C   +  +AE +F ++  K + +P  
Sbjct: 170 NRFFEDMKSREI--------SPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNI-EPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII--------D 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I+        +
Sbjct: 319 -------RLSVPTEAG---HYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHME 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+T  A +++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPIVEYLCNNGQTSKAEALVRQLM-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 484

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/484 (73%), Positives = 422/484 (87%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHG+K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK GIVQESVK+F  M++LGVER+ KSYD 
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDT 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGR+MMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFF+DMKSR 
Sbjct: 121 LFKVILRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DV+TYNTMINGY R KKMDEAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK + +KPNA+TY+ LLPGLC+A KM E + VL+EMV++YI P DNS+FM+L+  
Sbjct: 241 RLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVLKAMIRLS+PTEAGHYG+LIENFCKA+ +D+A+KLLDKL+EK+IILR
Sbjct: 301 QCKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME S+YNPMI++LC+NGQT KAE   RQL+K GV DP A N L+RGHS+EG+PD
Sbjct: 361 PQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQLLKLGVQDPTALNTLVRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKXALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/484 (19%), Positives = 200/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVL 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y  L   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRGRFMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  D +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFDDMKSREI--------SPDVITYNTMINGYYRVKKMDEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++    + G +  A+ V+K+M+                      
Sbjct: 281 MVDKYIAPTDNSIFMRLISGQCKTGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII--------D 585
                  R+ +  ++G   ++  L+    +  +   AVKLLD  + +D I+        +
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKADQHDKAVKLLDKLIEKDIILRPQSTLHME 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+T  A +++ +++ K GV D  + + L+ G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQTAKAEALVRQLL-KLGVQDPTALNTLVRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 484

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/484 (72%), Positives = 424/484 (87%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHGAKNSEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+I+RRGR+MMAKRYFNKMLS GIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DV+TYNTMINGY R KKM+EAEK F EMK KNIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK + +KPNA+TY+ LLPGLC+A KM E + +L+EMV++YI P DNS+FM+L+  
Sbjct: 241 RLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVLK+MIRLS+PTEAGHYG+LIEN+CKA  YD+A+KLLDKL+EK+II+R
Sbjct: 301 QCKAGNLDAAADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME S+YNP++++LC+NGQT KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVGSEKSAYDSLVQSYLKKSEPADAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 100/493 (20%), Positives = 209/493 (42%), Gaps = 93/493 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVL 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSXG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F ++  K + +P  
Sbjct: 170 NRFFEDMKSREI--------SPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNI-EPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+KSM+                      
Sbjct: 281 MVDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII--------D 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I+        +
Sbjct: 319 -------RLSVPTEAG---HYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHME 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+T  A +++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPIVEYLCNNGQTSKAEALVRQLM-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIRGEMSRGSQK 657
            M+R ++  GS+K
Sbjct: 428 IMLRRKV--GSEK 438


>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 484

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/484 (73%), Positives = 422/484 (87%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP  DH LVYNVLH AKNSEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDED++ ++I+SYGK GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I  DVVTYNTM+NGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V+R DDAL
Sbjct: 181 IMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EMVE+YI P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G L+AAA+VLKAMIRLS+PTEAGHYG+LIEN+CKA  YD+AIKLLDK++EK+IILR
Sbjct: 301 QCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME+S+YNP+I++LC+NGQT KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  +Y  L++SYL+K EPADAK ALDSMIE+GH P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 113/508 (22%), Positives = 226/508 (44%), Gaps = 87/508 (17%)

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
           E + +++  + +++ R  +   A+     M  +G+E     + +M+  +  +  ++ +++
Sbjct: 42  EHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVK 101

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            F+ M+  G+   + +Y+ +     R  +   A++ F +M  + IEPT  ++  M+ G+ 
Sbjct: 102 MFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFF 161

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              + + A R F++MKS ++ P+ VTY  ++ G C   KM E +K   EM  R I P   
Sbjct: 162 LSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEP--- 218

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
                                        ++ T    Y  LI+ +   +  D A++L+++
Sbjct: 219 -----------------------------TVVT----YTTLIKGYVSVDRVDDALRLVEE 245

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV--LDPVAFNNL 420
           +  K   ++P       A +Y+ ++  LC+  +  +A    +++++K +   D   F  L
Sbjct: 246 M--KGFGMKPN------AITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRL 297

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG- 479
           I G  K G+ D+A  ++K M R  VP +A  Y  LIE+Y + GE   A   LD +IE   
Sbjct: 298 ISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDI 357

Query: 480 -HSPASSL------FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
              P S+L      +  ++E L  +G+   A  +++ +++ GV++   L        L+R
Sbjct: 358 ILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTAL------NTLIR 411

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           GH                           S++G   +A +LL   L R    + +SY+ +
Sbjct: 412 GH---------------------------SQEGSPDSAFELLKIMLRRKVDSEQSSYDSL 444

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTD 620
           + + L   +  +A + L  ++E G + D
Sbjct: 445 VQSYLKKNEPADAKAALDSMIENGHLPD 472



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 6/269 (2%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I+ L    +   A      + KKG+  D   +  +I  + K G    + ++ + M   G
Sbjct: 51  IIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELG 110

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V R   +Y  L +  LR+G    AK   + M+ +G  P    F  +M   F  G+V+TA+
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETAN 170

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVL 561
           R  + M  + +  ++     ++        +EEA      M       +V  + +L+   
Sbjct: 171 RFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG-GVTD 620
               +   A++L++   G     +  +Y  +L  L  A K   A SIL +++EK    TD
Sbjct: 231 VSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTD 290

Query: 621 WKSSDKLIAGLNQEGN-TKQADILSRMIR 648
                +LI+G  + G+    A++L  MIR
Sbjct: 291 NSIFMRLISGQCKAGDLDAAANVLKAMIR 319


>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 484

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/484 (73%), Positives = 421/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH AK SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK ILRRGRYMMAKRYFNKMLSEGIEP RHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+AGKM+E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QC SG+L+AAADVLKAMIRLS+PTEAGHYG+LIENFCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 QCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 96/484 (19%), Positives = 201/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPARHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+      G+  +A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S    G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ +++ K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAAKAEALVRQLL-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 484

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/484 (73%), Positives = 421/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP  DH LVYNVLH AKNSEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDED++ ++I+SYGK GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I  DVVTYNTM+NGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V+R DDAL
Sbjct: 181 IMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R  +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EMV++YI P DNS+FM+L+  
Sbjct: 241 RFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G L+AAA+VLKAMIRLS+PTEAGHYG+LIEN+CKA  YD+AIKLLDK++EK+IILR
Sbjct: 301 QCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME+S+YNP+I++LC+NGQT KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+GH P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEQSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 204/484 (42%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVL 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + +++  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMMWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI+  P      +  +YN M+   C   +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREIM--P------DVVTYNTMVNGYCRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A   V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++    + G +  A+ V+K+M+                      
Sbjct: 281 MVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII--------D 585
                  R+ +  ++G   ++  L+    + G+   A+KLLD  + +D I+        +
Sbjct: 319 -------RLSVPTEAG---HYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHME 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+T  A +++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 SSAYNPLIEYLCNNGQTAKAEALVRQLM-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
          Length = 481

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/481 (73%), Positives = 419/481 (87%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHGAK +EHALQFFRWVER+ LF HDRETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGAKKTEHALQFFRWVERSNLFQHDRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDED++ ++I+SYGKKGIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDLWVLMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGR+MMAKRYFNKML+EGIEPTRHT+NVM+WGFFLS K+ETA  FFEDMKSR 
Sbjct: 121 LFKVILRRGRFMMAKRYFNKMLNEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRD 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I+ DV+TYNT+INGY R KKM+EAE+ F EMK +NIEPTVI+YTT+IKGYV+V+R DDAL
Sbjct: 181 ITPDVITYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            + +EMK F +KPNA+TY+ LLPGLC+A KM E Q +L+EMV++YI P DNS+F+KL+  
Sbjct: 241 SLMEEMKGFGIKPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVLKAMIRLS+PTEAGHYG+LIEN+CKAE YD+A+ LLDKL+EK+IILR
Sbjct: 301 QCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAEKYDKAVNLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME S+YNPMI++LC NGQT KAE   RQLMK GV +P A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMEPSAYNPMIEYLCDNGQTAKAETLVRQLMKLGVQEPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+GH P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 91/484 (18%), Positives = 196/484 (40%), Gaps = 87/484 (17%)

Query: 176 KLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           K E A++FF  + +S     D  T+  +I    R  K++ A  +  +M +K +E     +
Sbjct: 24  KTEHALQFFRWVERSNLFQHDRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLW 83

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+ 
Sbjct: 84  VLMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLN 143

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             I P  ++  + + G    SG +  A    + M    I  +   Y  LI  + + +  +
Sbjct: 144 EGIEPTRHTFNVMIWGFFL-SGKVETANXFFEDMKSRDITPDVITYNTLINGYYRVKKME 202

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A +                 ++M+  +  P +                           
Sbjct: 203 EAERYF---------------VEMKGRNIEPTV--------------------------- 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           + +  LI+G+      D A  +++ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 ITYTTLIKGYVSVDRVDDALSLMEEMKGFGIKPNAITYSTLLPGLCNAEKMSEAQSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++    + G +  A+ V+K+M+                      
Sbjct: 281 MVDKYIAPTDNSIFLKLISGQCKAGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII--------D 585
                  R+ +  ++G   ++  L+    +  K   AV LLD  + +D I+        +
Sbjct: 319 -------RLSVPTEAG---HYGVLIENYCKAEKYDKAVNLLDKLIEKDIILRPQSTLHME 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+T  A +++ ++M K GV +  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCDNGQTAKAETLVRQLM-KLGVQEPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 484

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/484 (72%), Positives = 420/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH AK SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LF +ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QC SG+L+AAADVLKAMIRLS+PTEAGHYG+LIENFCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 QCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 200/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       +  +A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S    G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ +++ K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAAKAEALVRQLL-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
          Length = 484

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/484 (72%), Positives = 421/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHG+K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGR+MMAKRYFNKMLSEGIEPTRH +NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRFMMAKRYFNKMLSEGIEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DV+TYNTMINGY R KKMDEAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK + +KPNA+TY+ LLPGLC+A KM E + +L+EMV++Y+ P DNS+F +L+  
Sbjct: 241 RLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYMAPTDNSIFXRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVLKAMIRLS+PTEAGHYG+LIENFCKA  +D+A+KLLDKL+EK+IILR
Sbjct: 301 QCKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME S+YNPMI++LC+NGQT KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQLLKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P SSLFRSV 
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVX 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 96/484 (19%), Positives = 202/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVL 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  +                                     + ++I  F  +   + A
Sbjct: 146 IEPTRHX------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVITYNTMINGYYRVKKMDEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MVDKYMAPTDNSIFXRLISSQCKTGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII--------D 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I+        +
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKAGQHDKAVKLLDKLIEKDIILRPQSTLHME 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+T  A +++ +++ K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQTAKAEALVRQLL-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 481

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/481 (72%), Positives = 419/481 (87%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH AK SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+FD M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NV++WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCKSGHL+AA+DVLKAMIRLS+PTEAGHYG+LIENFCKA  YD+A+KLLDK++EK+IILR
Sbjct: 301 QCKSGHLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKVIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 98/484 (20%), Positives = 202/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++FD M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + +LI  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVLIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMXEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  AS V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKAGQYDQAVKLLDKVIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ +++ K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAAKAETLVRQLL-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 484

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/484 (72%), Positives = 420/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAM+RLS+PTEAGHYG+LIENFCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           S FE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SXFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 200/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+MV                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMV---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ +++ K GV D  + + LI G +QEG+     ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAAKAETLVRQLL-KLGVQDPTALNTLIRGHSQEGSPDSXFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 484

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/484 (72%), Positives = 420/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHGAKNSEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFQHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYG  GIVQESVK+F  M +LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVLMIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+I RRGRYMMAKRYFNKMLSEGIEPTRHT+N+M+WGFFLS K+ETA RFFEDMK+R 
Sbjct: 121 LFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I+ DV+TYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK + +K NA+TY+ LLPGLC+A KM E + +L+EMV++YI P DNS+FM+L+  
Sbjct: 241 RLVEEMKGYGIKANAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVLKAMIRLS+PTEAGHYG+LIEN+CKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 QCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME+S+YNP+I +LC+NGQT KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMESSAYNPLIGYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL++ EPADAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKRSEPADAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 98/484 (20%), Positives = 201/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFQHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVL 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M    V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVISRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + I+I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNIMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI   P      +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKNREIT--P------DVITYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKANAITYSTLLPGLCNAEKMSEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++    + G +  A+ V+K+M+                      
Sbjct: 281 MVDKYIAPTDNSIFMRLISGQCKAGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII--------D 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I+        +
Sbjct: 319 -------RLSVPTEAG---HYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHME 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  ++  L   G+T  A +++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 SSAYNPLIGYLCNNGQTAKAEALVRQLM-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 481

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/481 (73%), Positives = 418/481 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH AK SEHALQFFRWVER+ LF HDRETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHAAKTSEHALQFFRWVERSNLFEHDRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+I+RRGR+MMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K++TA+RFFEDMKSR 
Sbjct: 121 LFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMING  R KKMDEAEK F EMK KNIEPTV++YTT+IKGYV+V++  DAL
Sbjct: 181 ISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK + +KPNA+TY+ LLPGLC+AGKM E Q +L+EMV++YI PKDNS+FM+L+  
Sbjct: 241 RLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QC++G+L+AAADVLKAMIRLS+PTEAGHYG+LIENFCKA  +DRA+KLLDKL+EK+IILR
Sbjct: 301 QCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDRAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME S+YNPMI++LC NGQT KAE   RQL+K GV D  A N LIRG+++EG+PD
Sbjct: 361 PQSTLHMEPSAYNPMIEYLCSNGQTAKAEALVRQLLKLGVQDTTALNTLIRGYAQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDALVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 86/398 (21%), Positives = 171/398 (42%), Gaps = 60/398 (15%)

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D    +K++ +  ++  LN A  +L  M +  +  +   + ++I+++ KA +   ++KL 
Sbjct: 44  DRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLF 103

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFN 418
            K+ E    L  + T+     SY+ + + +   G+   A+ +F +++ +G+ +P    FN
Sbjct: 104 QKMEE----LGVERTI----KSYDALFKVIMRRGRFMMAKRYFNKMLSEGI-EPTRHTFN 154

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            +I G    G  D+A    + M  R +  D   Y  +I    R  +  +A+     M   
Sbjct: 155 VMIWGFFLSGKMDTAMRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGK 214

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
              P    + ++++      +V  A R+++ M   G+K N    + +L  L   G + EA
Sbjct: 215 NIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEA 274

Query: 539 LGRIDLMMQSGSVPNFDSL--------------------------LSVLSE--------- 563
              +  M+     P  +S+                          LSV +E         
Sbjct: 275 QSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIE 334

Query: 564 ----KGKTIAAVKLLDFCLGRDCII--------DLASYEKVLDALLAAGKTLNAYSILFK 611
                G+   AVKLLD  + +D I+        + ++Y  +++ L + G+T  A +++ +
Sbjct: 335 NFCKAGQHDRAVKLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCSNGQTAKAEALVRQ 394

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           ++ K GV D  + + LI G  QEG+   A ++L  M+R
Sbjct: 395 LL-KLGVQDTTALNTLIRGYAQEGSPDSAFELLKIMLR 431


>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 484

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/484 (72%), Positives = 420/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG+LIENFCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 96/484 (19%), Positives = 201/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQASKAETLVRQLM-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 484

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/484 (72%), Positives = 421/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHG+K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGSKKSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDED++ ++I+SYGK GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFL  K+ETA RFFEDMK R 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLCGKVETANRFFEDMKXRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DV+TYNTMINGY R KK++EAEK F EMK +NIEPTV++YTT+IKGYV+V+R DDAL
Sbjct: 181 ISPDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            + +EMK F +KPNA+TY+ LLPGLC+A KM E   +L+EMV++YI PKDNS+F++L+  
Sbjct: 241 TLLEEMKGFGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVDKYIAPKDNSIFLRLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVLKAMIRLS+PTEAGHYG+LIEN+CKA  Y++AIKLLDKL+EK+I+LR
Sbjct: 301 QCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGDYEKAIKLLDKLIEKDIVLR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQS+L ME S+YNP++++LC+NGQT KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSSLHMEPSAYNPLVEYLCNNGQTAKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR +  +  +Y  L++SYL+K EPADAK ALDSMIE+GH P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKIDSEKSSYDSLVQSYLKKSEPADAKAALDSMIENGHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/508 (22%), Positives = 223/508 (43%), Gaps = 87/508 (17%)

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
           E + +++  + +++ R  +   A+     M  +G+E     + +M+  +  +  ++ +++
Sbjct: 42  EHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVK 101

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            F+ M+  G+   + +Y+ +     R  +   A++ F +M  + IEPT  ++  MI G+ 
Sbjct: 102 LFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFF 161

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              + + A R F++MK  ++ P+ +TY  ++ G     K+ E +K   EM  R I P   
Sbjct: 162 LCGKVETANRFFEDMKXREISPDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEP--- 218

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
                                        ++ T    Y  LI+ +   +  D A+ LL++
Sbjct: 219 -----------------------------TVVT----YTTLIKGYVSVDRVDDALTLLEE 245

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL--DPVAFNNL 420
           +  K   ++P       A +Y+ ++  LC+  +  +A    ++++ K +   D   F  L
Sbjct: 246 M--KGFGIKPN------AITYSTLLPGLCNAEKMSEASGILKEMVDKYIAPKDNSIFLRL 297

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG- 479
           I G  K GN D+A +++K M R  VP +A  Y  LIE+Y + G+   A   LD +IE   
Sbjct: 298 ISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGDYEKAIKLLDKLIEKDI 357

Query: 480 -HSPASSL------FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
              P SSL      +  ++E L  +G+   A  +++ +++ GV++   L        L+R
Sbjct: 358 VLRPQSSLHMEPSAYNPLVEYLCNNGQTAKAETLVRQLMKLGVQDPTAL------NTLIR 411

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           GH                           S++G   +A +LL   L R    + +SY+ +
Sbjct: 412 GH---------------------------SQEGSPDSAFELLKIMLRRKIDSEKSSYDSL 444

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTD 620
           + + L   +  +A + L  ++E G + D
Sbjct: 445 VQSYLKKSEPADAKAALDSMIENGHLPD 472



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 6/269 (2%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I+ L    +   A      + KKG+  D   +  +I  + K G    + ++ + M   G
Sbjct: 51  IIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELG 110

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V R   +Y  L +  LR+G    AK   + M+ +G  P    F  ++   F  G+V+TA+
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLCGKVETAN 170

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVL 561
           R  + M  + +  ++     ++        +EEA      M       +V  + +L+   
Sbjct: 171 RFFEDMKXREISPDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG-GVTD 620
               +   A+ LL+   G     +  +Y  +L  L  A K   A  IL ++++K     D
Sbjct: 231 VSVDRVDDALTLLEEMKGFGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVDKYIAPKD 290

Query: 621 WKSSDKLIAGLNQEGN-TKQADILSRMIR 648
                +LI+G  + GN    AD+L  MIR
Sbjct: 291 NSIFLRLISGQCKAGNLDAAADVLKAMIR 319


>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 484

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/484 (73%), Positives = 420/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FD  LVYNVLHGAK SEHALQFFRWVER+ LF H+R+THLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDQELVYNVLHGAKTSEHALQFFRWVERSNLFEHNRDTHLKIIEILGRALK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+I+RRGR+MMAKRYFNKMLSEGIEPTRHT+NV++WGFFLS K++TA RFFEDMKSR 
Sbjct: 121 LFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVDTANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMING  R KKMDEAEK F EMK +NIEPTV+SYTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK + +KPNA+TY+ LLPGLCDAGKM E Q +L+EMV++YI PKDNS+FM+L+  
Sbjct: 241 RLVEEMKGYGIKPNAITYSTLLPGLCDAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QC++G+L AAADVLKAMIRLS+PTEAGHYG+LIENFCKA  +D+A+KLLDKL+EK+IILR
Sbjct: 301 QCEAGNLGAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME S+YNPMI++LC+NGQT KAE   RQL+K GV D  A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQLLKLGVQDSTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK AL SMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALGSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/393 (21%), Positives = 170/393 (43%), Gaps = 60/393 (15%)

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
           +K++ +  ++  LN A  +L  M +  +  +   + ++I+++ KA +   ++KL  K+ E
Sbjct: 49  LKIIEILGRALKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEE 108

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRG 423
               L  + T+     SY+ + + +   G+   A+ +F +++ +G+ +P    FN LI G
Sbjct: 109 ----LGVERTI----KSYDALFKVIMRRGRFMMAKRYFNKMLSEGI-EPTRHTFNVLIWG 159

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
               G  D+A    + M  R +  D   Y  +I    R  +  +A+     M      P 
Sbjct: 160 FFLSGKVDTANRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPT 219

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + ++++      +V  A R+++ M   G+K N    + +L  L   G + EA   + 
Sbjct: 220 VVSYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCDAGKMSEAQSILK 279

Query: 544 LMMQSGSVPNFDSL--------------------------LSVLSE-------------K 564
            M+     P  +S+                          LSV +E              
Sbjct: 280 EMVDKYIAPKDNSIFMRLISSQCEAGNLGAAADVLKAMIRLSVPTEAGHYGVLIENFCKA 339

Query: 565 GKTIAAVKLLDFCLGRDCII--------DLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           G+   AVKLLD  + +D I+        + ++Y  +++ L   G+T  A +++ +++ K 
Sbjct: 340 GQHDKAVKLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQLL-KL 398

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           GV D  + + LI G +QEG+   A ++L  M+R
Sbjct: 399 GVQDSTALNTLIRGHSQEGSPDSAFELLKIMLR 431


>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 484

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/484 (72%), Positives = 419/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHGAKN+EHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPCFDHELVYNVLHGAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WD DM+ ++I+SYGK GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDXDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DV+TYNTMINGY R KKM+EAEK F EMK KNIEP V++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK + +KPNA+TY+ LLPGLC+A KM E + +L+EM+++YI P DNS+FM+L+  
Sbjct: 241 RLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVLKAMIRLS+PTEAGHYG+LIEN+CKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 QCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME S+YN MI++LC+NGQ  KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMEPSAYNXMIEYLCNNGQXAKAETLVRQLLKLGVQDPTALNTLIRGHSREGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPXDAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/484 (19%), Positives = 202/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDXDMWVL 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F ++  K + +P  
Sbjct: 170 NRFFEDMKSREI--------SPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNI-EPNV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII--------D 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I+        +
Sbjct: 319 -------RLSVPTEAG---HYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHME 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ +++ K GV D  + + LI G ++EG+   A ++L 
Sbjct: 369 PSAYNXMIEYLCNNGQXAKAETLVRQLL-KLGVQDPTALNTLIRGHSREGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 484

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/484 (72%), Positives = 420/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+F++L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AA DVLKAMIRLS+PTEAGHYG+LIENFCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAVDVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 96/484 (19%), Positives = 200/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A  V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFLRLISSHCKSGNLDAAVDVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQASKAETLVRQLM-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 484

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/484 (72%), Positives = 420/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LV  FDH LVYNVLH AK SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVSSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLD+PKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDIPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNT+INGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QC SG+L+AAADVLKAMIRLS+PTEAGHYG+LIENFCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 QCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 93/484 (19%), Positives = 200/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  ++ +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDIPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN +I       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTIINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       +  +A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S    G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ +++ K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAAKAEALVRQLL-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 484

 Score =  761 bits (1966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/484 (72%), Positives = 418/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAM RLS+PTEAGHYG+LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 200/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M                       
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMX---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ +++ K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAAKAETLVRQLL-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660948|gb|ACU25643.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 484

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/484 (72%), Positives = 418/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR+LVP FDH LVYNVLHGAK +EHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRSLVPSFDHELVYNVLHGAKKAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDED++ ++I+SYGK GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+N M+WGFFLS K++TA RFFE MKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNFMIWGFFLSGKVDTANRFFEXMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I  DV+TYNTMINGY R KKM+E E  F EMK +NIEPTV++YTT+IKGYV+V+R DDAL
Sbjct: 181 IMPDVITYNTMINGYYRVKKMEEXENYFMEMKGRNIEPTVVTYTTLIKGYVSVDRIDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F + PNA+TY+ LLPGLC+A KM E Q +L+EMV++YI PKDNS+F++L+  
Sbjct: 241 RLVEEMKGFGINPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPKDNSIFLRLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK G+L+AAADVLK MIRLS+PTEAGHYG+LIEN CKA  YDRA+K LDK++EK+IILR
Sbjct: 301 QCKVGNLDAAADVLKVMIRLSVPTEAGHYGVLIENCCKAGQYDRAVKFLDKVIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQS+L ME S+YNP+I++LC+NGQT KAE   RQLMK GVLDP+A N LIRGHS+EG+PD
Sbjct: 361 PQSSLHMEPSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVLDPIALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYLRK EPADAK ALDSM+E+GH P SSL+RSVM
Sbjct: 421 SAFELLKIMLRRKVDSEESAYDSLVQSYLRKNEPADAKAALDSMVENGHLPDSSLYRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 96/486 (19%), Positives = 200/486 (41%), Gaps = 91/486 (18%)

Query: 176 KLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           K E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +
Sbjct: 24  KAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLW 83

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+ 
Sbjct: 84  VLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS 143

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             I P  ++                                    +  +I  F  +   D
Sbjct: 144 EGIEPTRHT------------------------------------FNFMIWGFFLSGKVD 167

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A +  + +  +EI+         +  +YN MI       +  + E +F + MK   ++P
Sbjct: 168 TANRFFEXMKSREIM--------PDVITYNTMINGYYRVKKMEEXENYFME-MKGRNIEP 218

Query: 415 --VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A++ L
Sbjct: 219 TVVTYTTLIKGYVSVDRIDDALRLVEEMKGFGINPNAITYSTLLPGLCNAEKMSEAQSIL 278

Query: 473 DSMIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
             M++   +P  +S+F  ++    + G +  A+ V+K M+                    
Sbjct: 279 KEMVDKYIAPKDNSIFLRLISGQCKVGNLDAAADVLKVMI-------------------- 318

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII------- 584
                    R+ +  ++G   ++  L+    + G+   AVK LD  + +D I+       
Sbjct: 319 ---------RLSVPTEAG---HYGVLIENCCKAGQYDRAVKFLDKVIEKDIILRPQSSLH 366

Query: 585 -DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DI 642
            + ++Y  +++ L   G+T  A +++ ++M K GV D  + + LI G +QEG+   A ++
Sbjct: 367 MEPSAYNPLIEYLCNNGQTAKAETLVRQLM-KLGVLDPIALNTLIRGHSQEGSPDSAFEL 425

Query: 643 LSRMIR 648
           L  M+R
Sbjct: 426 LKIMLR 431


>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 484

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/484 (72%), Positives = 417/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHGAKN EHALQFFRWVER+ LF H+RETH K+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGAKNXEHALQFFRWVERSNLFEHNRETHHKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDED++ +LI+SYGK GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDLWVLLIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEG EPTRHT+N+M+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGNEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I  DVVTYNTMI GY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V+R DDAL
Sbjct: 181 IMPDVVTYNTMIXGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EMVE+YI P DNS+F++L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAQKMSEARSILKEMVEKYITPTDNSIFLRLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G L+AAADVLKAMIRLS+PTEAGHYG+LIEN+CKA  YD+A+KLLD+L+EK+IILR
Sbjct: 301 QCKAGDLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDRLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNP+I++LC+NGQT KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPLIEYLCNNGQTAKAESLVRQLMKLGVQDPTALNALIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR    +  AY  L++SYL+K EPADAK ALDSMIE+GH P  +LFRSVM
Sbjct: 421 SAFELLKIMLRRKARSEKSAYDSLVQSYLKKSEPADAKAALDSMIENGHLPDPALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 97/484 (20%), Positives = 203/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T++ +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHHKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVL 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  LIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
             P  ++                                    + I+I  F  +   + A
Sbjct: 146 NEPTRHT------------------------------------FNIMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI+         +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREIM--------PDVVTYNTMIXGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDRVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAQKMSEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M+E   +P  +S+F  ++    + G +  A+ V+K+M+                      
Sbjct: 281 MVEKYITPTDNSIFLRLISGQCKAGDLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENYCKAGQYDQAVKLLDRLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+T  A S++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPLIEYLCNNGQTAKAESLVRQLM-KLGVQDPTALNALIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 484

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/484 (72%), Positives = 419/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+F++L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYGILIENFCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGILIENFCKAGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YN MI++LC+NGQ  KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNLMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 96/484 (19%), Positives = 201/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFLRLISSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGILIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNLMIEYLCNNGQASKAETLVRQLM-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 484

 Score =  760 bits (1963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/484 (71%), Positives = 419/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHGAKN+EHALQFFRWVER+ L  H+RE HLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGAKNAEHALQFFRWVERSNLLEHNREIHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+I RRGRYMM+KRYFNKM++EGIEPTRHT+NV++WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I+ DV+TYNTMINGYNR KKM+EAEK F EMKE+ I+PTV++YTT+IKGY +V+R DDAL
Sbjct: 181 ITPDVITYNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIKGYASVDRVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK   +KPNA+TY+ LLPGLC+A KM E + +L+EMV++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGLGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVLKAMIRLS+PTEAGHYG+LIE +CKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 QCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIEYYCKAGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME S+YNP+I++LC+NGQT KAE   RQLMK GV DP + N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMELSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVQDPTSLNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 95/453 (20%), Positives = 192/453 (42%), Gaps = 90/453 (19%)

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           R  K++ A  +  +M +K +E     +  MI  Y       +++++F +M+   V+    
Sbjct: 57  RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKAGIVQESVKLFQKMEELGVERTIK 116

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           +Y AL   +   G+ +  ++   +MV   I P  ++                        
Sbjct: 117 SYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHT------------------------ 152

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
                       + +LI  F  +   + A +  + +  +EI          +  +YN MI
Sbjct: 153 ------------FNVLIWGFFLSGKVETANRFFEDMKSREIT--------PDVITYNTMI 192

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
                  +  +AE +F + MK+  +DP  V +  LI+G++     D A  +V+ M   G+
Sbjct: 193 NGYNRVKKMEEAEKYFLE-MKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMKGLGI 251

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA-SSLFRSVMESLFEDGRVQTAS 504
             +A  Y  L+       + ++A++ L  M++   +P  +S+F  ++ S  + G +  A+
Sbjct: 252 KPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAA 311

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEK 564
            V+K+M+                             R+ +  ++G   ++  L+    + 
Sbjct: 312 DVLKAMI-----------------------------RLSVPTEAG---HYGVLIEYYCKA 339

Query: 565 GKTIAAVKLLDFCLGRDCII--------DLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           G+   AVKLLD  + +D I+        +L++Y  +++ L   G+T  A +++ ++M K 
Sbjct: 340 GQYDKAVKLLDKLIEKDIILRPQSTLHMELSAYNPLIEYLCNNGQTAKAETLVRQLM-KL 398

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           GV D  S + LI G +QEG+   A ++L  M+R
Sbjct: 399 GVQDPTSLNTLIRGHSQEGSPDSAFELLKIMLR 431



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 6/269 (2%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I+ L    +   A      + KKG+  D   +  +I  + K G    + ++ + M   G
Sbjct: 51  IIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKAGIVQESVKLFQKMEELG 110

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V R   +Y  L +   R+G    +K   + M+ +G  P    F  ++   F  G+V+TA+
Sbjct: 111 VERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETAN 170

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ---SGSVPNFDSLLSVL 561
           R  + M  + +  ++     ++        +EEA      M +     +V  + +L+   
Sbjct: 171 RFFEDMKSREITPDVITYNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIKGY 230

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG-GVTD 620
           +   +   A++L++   G     +  +Y  +L  L  A K   A SIL ++++K    TD
Sbjct: 231 ASVDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPTD 290

Query: 621 WKSSDKLIAGLNQEGN-TKQADILSRMIR 648
                +LI+   + GN    AD+L  MIR
Sbjct: 291 NSIFMRLISSQCKAGNLDAAADVLKAMIR 319


>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 484

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/484 (72%), Positives = 417/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DD L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG LIENFCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKAGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AYI L++S L+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVBSEKSAYISLVQSXLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 197/484 (40%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D    +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGXLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A   L + + K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAXKA-ETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 484

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/484 (72%), Positives = 418/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+ M+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG+LIENFCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YN MI++LC+NGQ  KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNSMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/356 (20%), Positives = 152/356 (42%), Gaps = 23/356 (6%)

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
           +K++ +  ++  LN A  +L  M +  +  +   + ++I+++ K  +   ++K+  K+ E
Sbjct: 49  LKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEE 108

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRG 423
               L  + T+     SYN + + +   G+   A+ +F +++ +G+ +P    FN +I G
Sbjct: 109 ----LGVERTI----KSYNALFKVILRRGRYMMAKRYFNKMLSEGI-EPTRHTFNVMIWG 159

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
               G  ++A    + M  R +  D   Y  +I  Y R  +  +A+     M      P 
Sbjct: 160 FFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + ++++      +V  A R+++ M   G+K N    + +L  L     + EA   + 
Sbjct: 220 VVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILK 279

Query: 544 LMMQSGSVPNFDS----LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
            MM     P  +S    L+S   + G   AA  +L   +      +   Y  +++    A
Sbjct: 280 EMMDKYLAPTDNSIIMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKA 339

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSS--------DKLIAGLNQEGNTKQADILSRMI 647
           G+   A  +L K++EK  +   +S+        + +I  L   G   +A+ L R +
Sbjct: 340 GQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNSMIEYLCNNGQASKAETLVRQL 395



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 6/269 (2%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I+ L    +   A      + KKG+  D   +  +I  + KEG    + ++ + M   G
Sbjct: 51  IIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V R   +Y  L +  LR+G    AK   + M+ +G  P    F  ++   F  G+V+TA+
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVL 561
           R  + M  + +  ++     ++        +EEA      M       +V  + +L+   
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG-GVTD 620
               +   A++L++   G     +  +Y  +L  L  A K   A  IL ++M+K    TD
Sbjct: 231 VSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTD 290

Query: 621 WKSSDKLIAGLNQEGN-TKQADILSRMIR 648
                +LI+   + GN    AD+L  MIR
Sbjct: 291 NSIIMRLISSHCKSGNLDAAADVLKAMIR 319


>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 484

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/484 (72%), Positives = 417/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DN +FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG+LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 6/269 (2%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I+ L    +   A      + KKG+  D   +  +I  + KEG    + ++ + M   G
Sbjct: 51  IIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V R   +Y  L +  LR+G    AK   + M+ +G  P    F  ++   F  G+V+TA+
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVL 561
           R  + M  + +  ++     ++        +EEA      M       +V  + +L+   
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG-GVTD 620
               +   A++L++   G     +  +Y  +L  L  A K   A  IL ++M+K    TD
Sbjct: 231 VSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTD 290

Query: 621 WKSSDKLIAGLNQEGN-TKQADILSRMIR 648
                +LI+   + GN    AD+L  MIR
Sbjct: 291 NXIFMRLISSHCKSGNLDAAADVLKAMIR 319


>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 481

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/481 (72%), Positives = 415/481 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH AK SEHALQFFRWVER+ LF HBRETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHBRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTR  +NV++WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EMV++Y+ P DNS+FM+L+  
Sbjct: 241 RLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QC SGHL+AA+DVLKAMIRLS+PTEAGHYG+LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 QCTSGHLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDQAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL++ EPADAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKRNEPADAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 96/484 (19%), Positives = 198/484 (40%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     B  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHBRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P                                        + +LI  F  +   + A
Sbjct: 146 IEPTRXX------------------------------------FNVLIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  + + M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S    G +  AS V+K+M+                      
Sbjct: 281 MVDKYLAPTDNSIFMRLITSQCTSGHLDAASDVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKXGQYDQAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ +++ K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAAKAETLVRQLL-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 481

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/481 (71%), Positives = 419/481 (87%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHGAKN+EHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+I RRGRYMM+KRYFNKM++EGIEPTRHT+NV++WGFFLS K+ETA RFFED+KSR 
Sbjct: 121 LFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I+ DVVTYNTMINGY R KKM+EAEK F EMKEK I+PTV++YTT+IKGY +++R DDAL
Sbjct: 181 ITPDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK   +KPNA+TY+ LLPGLCDA KM E + +L+EMV++YI PKDNS+F++L+  
Sbjct: 241 RLVEEMKGLGIKPNAITYSTLLPGLCDAEKMSEARSLLKEMVDKYIAPKDNSIFIRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVLKAMIRLSIPTEAGHYG+LIEN+CKA  YD+A+KL DKL+EK+IILR
Sbjct: 301 QCKAGNLDAAADVLKAMIRLSIPTEAGHYGVLIENYCKAGKYDQAVKLFDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME S+YNP+I++LC+NGQTGKAE   RQLMK GV D ++ N LIRGHS+EG+PD
Sbjct: 361 PQSTLHMEPSAYNPLIEYLCNNGQTGKAETLVRQLMKLGVQDSISLNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFEI+KIM RR V  +  AY  L++SYL++ EPADAK ALD MIE+ H P SSLFRSVM
Sbjct: 421 SAFEILKIMLRRKVDSEKSAYDSLVQSYLKRNEPADAKAALDXMIENDHLPDSSLFRSVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 103/484 (21%), Positives = 204/484 (42%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVL 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +MV   
Sbjct: 86  MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + +LI  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVLIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + L  +EI          +  +YN MI       +  +AE +F + MK+  +DP  
Sbjct: 170 NRFFEDLKSREIT--------PDVVTYNTMINGYTRVKKMEEAEKYFLE-MKEKKIDPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G++     D A  +V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYASIDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCDAEKMSEARSLLKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MVDKYIAPKDNSIFIRLISSQCKAGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII--------D 585
                  R+ +  ++G   ++  L+    + GK   AVKL D  + +D I+        +
Sbjct: 319 -------RLSIPTEAG---HYGVLIENYCKAGKYDQAVKLFDKLIEKDIILRPQSTLHME 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+T  A +++ ++M K GV D  S + LI G +QEG+   A +IL 
Sbjct: 369 PSAYNPLIEYLCNNGQTGKAETLVRQLM-KLGVQDSISLNTLIRGHSQEGSPDSAFEILK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 484

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/484 (72%), Positives = 416/484 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKVGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           E LF
Sbjct: 481 EXLF 484



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/484 (19%), Positives = 198/484 (40%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGXLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A   L + + K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAXKA-ETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 484

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/484 (71%), Positives = 417/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR L P FDH LVYNVLH AK SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLXPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTR T+ V++WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KK +EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+ Y+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCKSG+L+AA+DVLKAMIRLS+PTEAGHYG+LIENFCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 QCKSGNLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKWGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EPADAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 97/484 (20%), Positives = 201/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P   +                                    + +LI  F  +   + A
Sbjct: 146 IEPTRXT------------------------------------FXVLIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKXEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A++ L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  AS V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ +++ K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAAKAETLVRQLL-KWGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 484

 Score =  756 bits (1953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/484 (71%), Positives = 417/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +  SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSNTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK   +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG+LIE FCKA  YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E ++YNPMI++LC+NGQ  KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPNAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 97/484 (20%), Positives = 199/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS----- 588
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I+   S     
Sbjct: 319 -------RLSVPTEAG---HYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 589 ---YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
              Y  +++ L   G+   A +++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PNAYNPMIEYLCNNGQASKAETLVRQLM-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 484

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/484 (72%), Positives = 416/484 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQXXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++S L+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVBSEKSAYNSLVQSXLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 96/484 (19%), Positives = 198/484 (40%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A   L + + K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQXXKA-ETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
           montevidense]
          Length = 481

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/481 (72%), Positives = 413/481 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHGAK SEHALQFFRWVZR+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGAKKSEHALQFFRWVZRSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG+QWDED++ ++I+SYGK GIVQESVK+F  M++LGVER++KSYD 
Sbjct: 61  LNHARCILLDMPKKGLQWDEDLWVLMIDSYGKAGIVQESVKLFHKMEELGVERTIKSYDV 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+N+M+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAXRFFEDMKSRD 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I+ DV+TYNTMINGY R KKM+EAEK F EMK +NIEPTV+++TT+IKGYVAV+R DDAL
Sbjct: 181 ITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+  LPGLC+A KM E +  L+EMV++YI P DNS+F++L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVLKAMIRLS+PTEAGHYG+LIEN+CKA  YD+AI LLDKL+EK+IILR
Sbjct: 301 QCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAVQYDKAISLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQST  ME S+YNP+I++LC+NGQT KAE   RQLMK GV D  A N LIRGHS+EG+PD
Sbjct: 361 PQSTSHMEPSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVQDATALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR    +  AY  L++ YL+K EPADAKTALDSMIE+GH P SSLFR VM
Sbjct: 421 SAFELLKIMLRRKXDSEKSAYNSLVQCYLKKSEPADAKTALDSMIENGHLPDSSLFRLVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 91/486 (18%), Positives = 198/486 (40%), Gaps = 91/486 (18%)

Query: 176 KLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           K E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K ++     +
Sbjct: 24  KSEHALQFFRWVZRSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLQWDEDLW 83

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             MI  Y       +++++F +M+   V+    +Y  L   +   G+ +  ++   +M+ 
Sbjct: 84  VLMIDSYGKAGIVQESVKLFHKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLS 143

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             I P  ++                                    + I+I  F  +   +
Sbjct: 144 EGIEPTRHT------------------------------------FNIMIWGFFLSGKVE 167

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A +  + +  ++I          +  +YN MI       +  +AE +F + MK   ++P
Sbjct: 168 TAXRFFEDMKSRDIT--------PDVITYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEP 218

Query: 415 --VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             V    LI+G+      D A  +V+ M   G+  +A  Y   +       + ++A++ L
Sbjct: 219 TVVTHTTLIKGYVAVDRVDDALRLVEEMKGFGIKPNAITYSTXLPGLCNAEKMSEARSXL 278

Query: 473 DSMIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
             M++   +P  +S+F  ++    + G +  A+ V+K+M+                    
Sbjct: 279 KEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLKAMI-------------------- 318

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII------- 584
                    R+ +  ++G   ++  L+    +  +   A+ LLD  + +D I+       
Sbjct: 319 ---------RLSVPTEAG---HYGVLIENYCKAVQYDKAISLLDKLIEKDIILRPQSTSH 366

Query: 585 -DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DI 642
            + ++Y  +++ L   G+T  A +++ ++M K GV D  + + LI G +QEG+   A ++
Sbjct: 367 MEPSAYNPLIEYLCNNGQTAKAETLVRQLM-KLGVQDATALNTLIRGHSQEGSPDSAFEL 425

Query: 643 LSRMIR 648
           L  M+R
Sbjct: 426 LKIMLR 431


>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 484

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/484 (71%), Positives = 417/484 (86%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHG+K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGSKKSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDED++ ++I+SYGK GIVQESVK+F  M++LGVER++KSYD 
Sbjct: 61  LNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDV 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+N+M+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRX 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I+ DV+TYNTMINGY R KKM+EAEK F EMK +NIEPTV++ TT+IKGYV+V+R DDAL
Sbjct: 181 ITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E +  L+EMV++YI P DNS+F++L+  
Sbjct: 241 RLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK+G+L+AAADVL+AMIRLS+PTEAGHYG+LIEN+CKA  YD+AI LLDKL+EK+IILR
Sbjct: 301 QCKAGNLDAAADVLQAMIRLSVPTEAGHYGVLIENYCKAGQYDKAINLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL ME  +YNP+I++LC+NG+T KAE   RQLMK GV D +A N LI GHS+EG+PD
Sbjct: 361 PQSTLHMEXIAYNPLIEYLCNNGRTAKAETLVRQLMKLGVQDSIALNTLILGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR +     AY  L++SYL+K EPADAK ALDSMIE+GH P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKIDSAKSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 153/356 (42%), Gaps = 23/356 (6%)

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
           +K++ +  ++  LN A  +L  M +  +  +   + ++I+++ KA +   ++KL  K+ E
Sbjct: 49  LKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEE 108

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRG 423
               L  + T+     SY+ + + +   G+   A+ +F +++ +G+ +P    FN +I G
Sbjct: 109 ----LGVERTI----KSYDVLFKVILRRGRYMMAKRYFNKMLSEGI-EPTRHTFNIMIWG 159

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
               G  ++A    + M  R +  D   Y  +I  Y R  +  +A+     M      P 
Sbjct: 160 FFLSGKVETANRFFEDMKSRXITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
                ++++      RV  A R+ + M   G+K N    + +L  L     + EA   + 
Sbjct: 220 VVTXTTLIKGYVSVDRVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSXLK 279

Query: 544 LMMQSGSVPNFDS----LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
            M+     P  +S    L+S   + G   AA  +L   +      +   Y  +++    A
Sbjct: 280 EMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLQAMIRLSVPTEAGHYGVLIENYCKA 339

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSS--------DKLIAGLNQEGNTKQADILSRMI 647
           G+   A ++L K++EK  +   +S+        + LI  L   G T +A+ L R +
Sbjct: 340 GQYDKAINLLDKLIEKDIILRPQSTLHMEXIAYNPLIEYLCNNGRTAKAETLVRQL 395



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 9/236 (3%)

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +I  + K G    + ++ + M   GV R   +Y  L +  LR+G    AK   + M+ +G
Sbjct: 86  MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    F  ++   F  G+V+TA+R  + M  + +  ++     ++        +EEA 
Sbjct: 146 IEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRXITPDVITYNTMINGYYRVKKMEEAE 205

Query: 540 GRIDLMMQSGSVPNFDSLLSVLSEKG-----KTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
                M      P   +  +++  KG     +   A++L +   G     +  +Y  +L 
Sbjct: 206 KYFVEMKGRNIEPTVVTXTTLI--KGYVSVDRVDDALRLXEEMKGFGIKPNAITYSTLLP 263

Query: 595 ALLAAGKTLNAYSILFKIMEKG-GVTDWKSSDKLIAGLNQEGN-TKQADILSRMIR 648
            L  A K   A S L ++++K    TD     +LI+G  + GN    AD+L  MIR
Sbjct: 264 GLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLQAMIR 319


>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 484

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/484 (71%), Positives = 415/484 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+ IVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A  M E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 96/484 (19%), Positives = 197/484 (40%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+         ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEXMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A   L + + K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAXKA-ETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 484

 Score =  754 bits (1947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/484 (71%), Positives = 415/484 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+ 
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNX 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++S L+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVBSEKSAYNSLVQSXLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 197/484 (40%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y  L   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A   L + + K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAXKA-ETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 484

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/484 (71%), Positives = 414/484 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPN +TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+ +AAADVLKAMIRLS+PTEAGHYG LI NFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNPDAAADVLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/454 (19%), Positives = 186/454 (40%), Gaps = 87/454 (19%)

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           ++ +++ F+ M+  G+   + +YN +     R  +   A++ F +M  + IEPT  ++  
Sbjct: 96  VQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNV 155

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI G+    + + A R F++MKS ++ P+ VTY  ++ G     KM E +K   EM  R 
Sbjct: 156 MIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRN 215

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P                                ++ T    Y  LI+ +   +  D A
Sbjct: 216 IEP--------------------------------TVVT----YTTLIKGYVSVDQVDDA 239

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA 416
           ++L++++  K   ++P +       +Y+ ++  LC+  +  +A +  +++M K +     
Sbjct: 240 LRLVEEM--KGFGIKPNTI------TYSTLLPGLCNAEKMSEARVILKEMMDKYL----- 286

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
                                        P D   ++ LI S+ + G P  A   L +MI
Sbjct: 287 ----------------------------APTDNSIFMRLISSHCKSGNPDAAADVLKAMI 318

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV----KENLDL----VAKILEA 528
                  +  +  ++ +  + G+   A +++  ++EK +    +  L L       ++E 
Sbjct: 319 RLSVPTEAGHYGXLIXNFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEY 378

Query: 529 LLMRGHVEEALGRIDLMMQSG--SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
           L   G   +A   +  + + G       ++L+   S++G   +A +LL   L R    + 
Sbjct: 379 LCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEK 438

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           ++Y  ++ + L   +  +A + L  ++E   + D
Sbjct: 439 SAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPD 472



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 6/269 (2%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I+ L    +   A      + KKG+  D   +  +I  + KEG    + ++ + M   G
Sbjct: 51  IIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V R   +Y  L +  LR+G    AK   + M+ +G  P    F  ++   F  G+V+TA+
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVL 561
           R  + M  + +  ++     ++        +EEA      M       +V  + +L+   
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG-GVTD 620
               +   A++L++   G     +  +Y  +L  L  A K   A  IL ++M+K    TD
Sbjct: 231 VSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTD 290

Query: 621 WKSSDKLIAGLNQEGNT-KQADILSRMIR 648
                +LI+   + GN    AD+L  MIR
Sbjct: 291 NSIFMRLISSHCKSGNPDAAADVLKAMIR 319


>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 481

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/481 (71%), Positives = 412/481 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFF WVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFXWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E +  L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAM RLS+PTEAGHYG+LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL+K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +   Y  L++SYL+K EP DAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSXYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 200/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFXWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVXLKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M                       
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMX---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A +++ +++ K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAAKAETLVRQLL-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 481

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/481 (71%), Positives = 411/481 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ET  RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG+LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKVGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNP I++LC+NGQ  KAE   RQL K GV DP A N LIRG S+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPXIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGXSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSXLFRSVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 196/484 (40%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   +  
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETX 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y   ++ L   G+   A   L + + K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPXIEYLCNNGQAXKA-ETLVRQLXKLGVQDPTALNTLIRGXSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 481

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/481 (71%), Positives = 412/481 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+ 
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNX 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGHYG LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL K GV D  A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQXXKAETLVRQLXKLGVQDXTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 197/484 (40%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y  L   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A   L + + K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQXXKA-ETLVRQLXKLGVQDXTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 481

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/481 (71%), Positives = 411/481 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +K SEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNT INGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ D AL
Sbjct: 181 ISPDVVTYNTXINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK F +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            C SG+L+AAADVLKAM RLS+PTEAGHYG+LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCXSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNP I++LC+NGQ  KAE   RQLMK GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPXIEYLCNNGQAXKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSSLFRSVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 197/484 (40%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN  I       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTXINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDXALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S    G +  A+ V+K+M                       
Sbjct: 281 MMDKYLAPTDNSIFMRLISSHCXSGNLDAAADVLKAMX---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y   ++ L   G+   A +++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPXIEYLCNNGQAXKAETLVRQLM-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 476

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/475 (72%), Positives = 411/475 (86%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           FDH LVYNVLH +K SEHA  FFRWVER+ LF H+RETHLK+IEILGR  KLNHARCILL
Sbjct: 2   FDHELVYNVLHSSKTSEHAFHFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 61

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           DMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++LGVER++KSY+ALFK+ILRRG
Sbjct: 62  DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 121

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           RYMM KRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETAIRFFEDMKSR IS DVVTYN
Sbjct: 122 RYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYN 181

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           TMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDALR+ +EMK F
Sbjct: 182 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 241

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+   CKSG+L+A
Sbjct: 242 GTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 301

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           AADVLKAMIRLS+PTEAGHYG+LIENFCKA  YD+A+KLLDKL+EK+I+LRPQSTL +E 
Sbjct: 302 AADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIMLRPQSTLHLEP 361

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           S++NPMI++LC+NGQ  KAE   RQLMK GV DP A N LIRGHS+EG+PDSAFE++KIM
Sbjct: 362 SAHNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIM 421

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
            RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVMESLF
Sbjct: 422 LRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESLF 476



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 95/484 (19%), Positives = 199/484 (41%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A  FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 18  EHAFHFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 77

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 78  MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLSEG 137

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 138 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 161

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
           I+  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 162 IRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 212

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G   +A  Y  L+       + ++A+  L  
Sbjct: 213 VTYTTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPGLCNAEKMSEARVILKE 272

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 273 MMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI---------------------- 310

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   ++  L+    + G+   AVKLLD  + +D +        ++
Sbjct: 311 -------RLSVPTEAG---HYGLLIENFCKAGQYDKAVKLLDKLIEKDIMLRPQSTLHLE 360

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            +++  +++ L   G+   A +++ ++M K GV D  + + LI G +QEG+   A ++L 
Sbjct: 361 PSAHNPMIEYLCNNGQASKAETLVRQLM-KLGVQDPTALNTLIRGHSQEGSPDSAFELLK 419

Query: 645 RMIR 648
            M+R
Sbjct: 420 IMLR 423


>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 484

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/484 (71%), Positives = 412/484 (85%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLH +   EHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NTIRNLVPSFDHELVYNVLHSSNTXEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDEDM+ ++I+SYGK+GIVQESVK+F  M++L VER++KSY+A
Sbjct: 61  LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELXVERTIKSYNA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ETA RFFEDMKSR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS DVVTYNTMINGY R KKM+EAEK F EMK +NIEPTV++YTT+IKGYV+V++ DDAL
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EMK   +KPNA+TY+ LLPGLC+A KM E + +L+EM+++Y+ P DNS+FM+L+  
Sbjct: 241 RLVZEMKGXGIKPNAITYSTLLPGLCNAEKMSEARVJLKEMMDKYLAPTDNSIFMRLIXS 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CKSG+L+AAADVLKAMIRLS+PTEAGH G LIENFCK   YD+A+KLLDKL+EK+IILR
Sbjct: 301 HCKSGNLDAAADVLKAMIRLSVPTEAGHXGXLIENFCKVGQYDKAVKLLDKLIEKDIILR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQSTL +E S+YNPMI++LC+NGQ  KAE   RQL K GV DP A N LIRGHS+EG+PD
Sbjct: 361 PQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L++SYL+K EP DAK ALDSMIE+ H P S+LFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEKXAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480

Query: 492 ESLF 495
           ESLF
Sbjct: 481 ESLF 484



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 96/484 (19%), Positives = 197/484 (40%), Gaps = 91/484 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVM 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V+    +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKEGIVQESVKMFQKMEELXVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++                                    + ++I  F  +   + A
Sbjct: 146 IEPTRHT------------------------------------FNVMIWGFFLSGKVETA 169

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +  + +  +EI          +  +YN MI       +  +AE +F + MK   ++P  
Sbjct: 170 NRFFEDMKSREI--------SPDVVTYNTMINGYYRVKKMEEAEKYFVE-MKGRNIEPTV 220

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI+G+      D A  +V+ M   G+  +A  Y  L+       + ++A+  L  
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVZEMKGXGIKPNAITYSTLLPGLCNAEKMSEARVJLKE 280

Query: 475 MIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           M++   +P  +S+F  ++ S  + G +  A+ V+K+M+                      
Sbjct: 281 MMDKYLAPTDNSIFMRLIXSHCKSGNLDAAADVLKAMI---------------------- 318

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------ID 585
                  R+ +  ++G   +   L+    + G+   AVKLLD  + +D I        ++
Sbjct: 319 -------RLSVPTEAG---HXGXLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLE 368

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
            ++Y  +++ L   G+   A   L + + K GV D  + + LI G +QEG+   A ++L 
Sbjct: 369 PSAYNPMIEYLCNNGQAXKA-ETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELLK 427

Query: 645 RMIR 648
            M+R
Sbjct: 428 IMLR 431


>gi|199601721|dbj|BAG70980.1| pentatricopeptide (PPR) repeat-containing protein [Musa balbisiana]
          Length = 788

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/653 (56%), Positives = 471/653 (72%), Gaps = 5/653 (0%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           MA R WTTRLQN IR+L   FD +LV  VL GA++ +HAL FFRWVE+ G F HD +T+ 
Sbjct: 123 MARRPWTTRLQNSIRSLARSFDQSLVLAVLRGARHPDHALHFFRWVEKTG-FRHDPDTYR 181

Query: 61  KMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
           ++I +L R   LNHARCILLD MP + V   EDMF  LIE YG   I QE+VKIF  + +
Sbjct: 182 EIILLLARASMLNHARCILLDDMPDRLVPPSEDMFASLIEGYGCARIPQEAVKIFRRLPE 241

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LGV R+V+SYDA+FK ILR GR  MA+R FN M++EG+ P   TYN +LWGF LS+K+ET
Sbjct: 242 LGVTRTVRSYDAVFKAILRSGRVAMARRLFNAMIAEGVLPVLSTYNTLLWGFCLSIKMET 301

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A RFF DMK RGI+ D+VTYNT++NG+ R KKMD+AEK+FAEM      P  ISY  MIK
Sbjct: 302 AQRFFADMKERGIAPDLVTYNTILNGWARAKKMDDAEKVFAEMTAAGFAPNSISYNIMIK 361

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD-AGKMVEVQKVLREMVERYIP 298
           GYV   R DD LR+F EM    ++ +  T+ AL+PGLCD  G+  E +K L EM +  + 
Sbjct: 362 GYVCSGRVDDGLRMFSEMGEKGLRFSEKTFAALMPGLCDDVGRAAEARKALNEMAKLQLT 421

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAI 357
           P D S+F++L+   C+SG L  A +V +   + + +  +   YG+L+E+ CK E ++ AI
Sbjct: 422 PSDKSIFLRLVTSLCESGDLEGALEVHRKTSQFNHVVVDPMQYGVLLESLCKGEKHESAI 481

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
            LLD+L+EK  +  PQ    +E S+YNPMI++LC +G T KAE FFRQLMKKGV D VAF
Sbjct: 482 ALLDELLEKGTMQSPQYPT-LEPSAYNPMIEYLCDHGDTKKAEAFFRQLMKKGVDDKVAF 540

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N+LIRGH+KEG P++A EI+ IM R GVP DAD+Y+ L+ES+L+K EPADA+TALDSM+E
Sbjct: 541 NSLIRGHAKEGMPEAASEILTIMTRHGVPTDADSYVLLVESFLKKSEPADARTALDSMME 600

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            GH P++SLFRSVM +LF+DGRVQTASRVMKSM+EKGVKEN+D+V KIL+AL MRGHVEE
Sbjct: 601 QGHLPSASLFRSVMVALFDDGRVQTASRVMKSMIEKGVKENMDMVHKILDALFMRGHVEE 660

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           ALGRI+LM+ +   P+ D LL  L +  K   A KL++F L RDC +  +SY++VLD L 
Sbjct: 661 ALGRINLMIMNDCTPDIDHLLITLCDSDKATEAQKLVEFALERDCDVSFSSYDRVLDVLY 720

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
            AGKTL AYSIL KI  KGGV D K  D +I  L  EGNTKQADILSR++ G+
Sbjct: 721 TAGKTLPAYSILCKIKAKGGVVDKKGCDAIIKSLIAEGNTKQADILSRILAGK 773


>gi|255660944|gb|ACU25641.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 481

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/481 (70%), Positives = 405/481 (84%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           N IR LVP FDH LVYNVLHGAKNSEHALQFFRWVER+ LF H+RETHLK+IEILGR  K
Sbjct: 1   NSIRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFXHNRETHLKIIEILGRASK 60

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           LNHARCILLDMPKKG++WDED++ ++I+SYGK GIVQESVK+F  M++LGV R++KSYDA
Sbjct: 61  LNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDA 120

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           LFK+ILRRGRYMMAKRYFNKMLSEGIEPTRHT+NVM+WGFFLS K+ET+ RFF DM SR 
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETSNRFFXDMXSRE 180

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I+ DVVTYNTMINGY R  KM+E EK F EMK +NIEPTV++YTT+IKGY +V+R DBAL
Sbjct: 181 ITPDVVTYNTMINGYYRVBKMEEXEKYFVEMKGRNIEPTVVTYTTLIKGYXSVDRVDBAL 240

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            + +EMK F +KPNA+TY+ LLPGLCDA KM E + +L+EMV +Y  P DNS+FM+L+  
Sbjct: 241 XLXEEMKXFGIKPNAITYSTLLPGLCDAEKMSEARSILKEMVXKYXAPTDNSIFMRLISG 300

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           QCK G L+AAADVJKAMIRLSIPTEAGHYG+LIE +CKA  YD+A+KLLDK++EK+II R
Sbjct: 301 QCKVGDLDAAADVJKAMIRLSIPTEAGHYGVLIEXYCKAGQYDKAVKLLDKVIEKDIISR 360

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           PQ+TL ME S+YN +I++LC+NGQT KAE   RZLMK GV DP A N LIRGHS EG+PD
Sbjct: 361 PQNTLXMEPSAYNXLIEYLCNNGQTAKAETLVRZLMKLGVQDPTALNTLIRGHSXEGSPD 420

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAFE++KIM RR V  +  AY  L +SYL+K EPA AK ALDSMIE+GH P SSLFRSVM
Sbjct: 421 SAFELLKIMLRRKVDSEQXAYDXLXQSYLKKXEPAXAKAALDSMIENGHLPDSSLFRSVM 480

Query: 492 E 492
           E
Sbjct: 481 E 481



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 91/482 (18%), Positives = 195/482 (40%), Gaps = 87/482 (18%)

Query: 178 ETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           E A++FF  + +S     +  T+  +I    R  K++ A  +  +M +K +E     +  
Sbjct: 26  EHALQFFRWVERSNLFXHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVL 85

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI  Y       +++++F +M+   V     +Y AL   +   G+ +  ++   +M+   
Sbjct: 86  MIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P  ++  + + G    SG +  +      M    I  +   Y  +I  + +       
Sbjct: 146 IEPTRHTFNVMIWGFFL-SGKVETSNRFFXDMXSREITPDVVTYNTMINGYYR------- 197

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA 416
              +BK+ E E     +  ++M+  +  P +                           V 
Sbjct: 198 ---VBKMEEXE-----KYFVEMKGRNIEPTV---------------------------VT 222

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  LI+G+      D A  + + M   G+  +A  Y  L+       + ++A++ L  M+
Sbjct: 223 YTTLIKGYXSVDRVDBALXLXEEMKXFGIKPNAITYSTLLPGLCDAEKMSEARSILKEMV 282

Query: 477 EDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
               +P  +S+F  ++    + G +  A+ V+K+M+                        
Sbjct: 283 XKYXAPTDNSIFMRLISGQCKVGDLDAAADVJKAMI------------------------ 318

Query: 536 EEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI--------IDLA 587
                R+ +  ++G   ++  L+    + G+   AVKLLD  + +D I        ++ +
Sbjct: 319 -----RLSIPTEAG---HYGVLIEXYCKAGQYDKAVKLLDKVIEKDIISRPQNTLXMEPS 370

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           +Y  +++ L   G+T  A +++ ++M K GV D  + + LI G + EG+   A ++L  M
Sbjct: 371 AYNXLIEYLCNNGQTAKAETLVRZLM-KLGVQDPTALNTLIRGHSXEGSPDSAFELLKIM 429

Query: 647 IR 648
           +R
Sbjct: 430 LR 431


>gi|242063722|ref|XP_002453150.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
 gi|241932981|gb|EES06126.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
          Length = 757

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/650 (49%), Positives = 443/650 (68%), Gaps = 7/650 (1%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNS---EHALQFFRWVERAGLFNHDRETHL 60
           R WTTRL+N IR L P  D  LV+ V+ GA ++   E ALQFFR+  R G F  D +T  
Sbjct: 90  RPWTTRLENSIRLLSPTLDAPLVHGVISGAASAGRAELALQFFRFAYRRGGFRPDGDTFA 149

Query: 61  KMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
            ++  L     LNHARC++LD MP   V  DE     LI +YG+  I QE+VK+F +M  
Sbjct: 150 LLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPD 209

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LGV R+  SY+A+ K IL RGR  MA+R +N M+++G+ P   TYN ++WGF L  K+ET
Sbjct: 210 LGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMET 269

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+R F +MK  G++ DV TYN ++N + R   ++ A K+F EM  K IE   +SY  MIK
Sbjct: 270 AVRVFGEMKGHGVTPDVTTYNALLNAWVRTGDLESARKVFDEMTGKGIERNSVSYNVMIK 329

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD-AGKMVEVQKVLREMVERYIP 298
           GYV   R ++A+ +F EM    ++ +  T+ AL+PGLCD  G+  E +K + +M ER + 
Sbjct: 330 GYVEGNRVEEAVALFAEMGEKGLRLSEKTFAALMPGLCDDQGRAAEARKAVDDMAERRLT 389

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAI 357
           PKD SVF++L+   CK+G L+ A +V +   +   +  +   YG+L+E  C     + AI
Sbjct: 390 PKDKSVFLRLVTTLCKAGDLDGALEVHRKSGQFKHVLVDPRQYGVLMEGLCAGGKSEMAI 449

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           ++LD+L+EK  +L P+S + +EAS+YNP+I+HLC NG T KAE FFRQLMKKGV D  AF
Sbjct: 450 EVLDELMEKGTLLSPKSPV-LEASAYNPVIEHLCSNGSTTKAETFFRQLMKKGVDDKAAF 508

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N+LIRGH+KEG P++A EI+ IM RR VP D ++++ L++S+L+K EPADAKTALDSM++
Sbjct: 509 NSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHVLLVDSFLKKNEPADAKTALDSMMQ 568

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            GH P+ +LF+SVME+LF DGR+QTASRVMKSM+EKGV EN+D+  KILEAL  RGHVEE
Sbjct: 569 HGHLPSPALFKSVMEALFNDGRIQTASRVMKSMIEKGVTENMDMAHKILEALFTRGHVEE 628

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A+GR++LM+++G +P+ D LL  L +  + + A KL DF L RD  +  ++Y++VL+AL 
Sbjct: 629 AIGRVNLMVENGCMPDLDKLLVGLCDNDRVMEAQKLADFALDRDFDVSFSTYDRVLEALY 688

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           A  KTL AYS+L KI  KGGV D K  D L+  L  EG +KQADILSR++
Sbjct: 689 AEEKTLPAYSMLCKIKNKGGVVDQKGCDALMESLKSEGYSKQADILSRIL 738


>gi|145282028|gb|ABP49617.1| ubiquitin-protein ligase-like protein [Pyrus communis]
          Length = 411

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/402 (76%), Positives = 351/402 (87%)

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           MKSF +KPNAVT++ LLPGLC+A K  E   +L+EMV+RY+ PKDNS+F KLL + CKSG
Sbjct: 1   MKSFGIKPNAVTFSTLLPGLCEAEKKDEAVNMLKEMVQRYVAPKDNSIFEKLLSLMCKSG 60

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L+AAADVLKAMIRL+IPTE GHYGILIENFCKA +YDRAIKLLDKL+EKEII+RPQS++
Sbjct: 61  DLDAAADVLKAMIRLTIPTEPGHYGILIENFCKAGVYDRAIKLLDKLIEKEIIIRPQSSI 120

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEI 436
            +EAS+YNPMI++LC++GQT KAE+FFRQLMKKGV D VAFNNL+ GH+KEGN DS FEI
Sbjct: 121 KLEASAYNPMIEYLCNHGQTEKAEVFFRQLMKKGVQDSVAFNNLMCGHAKEGNSDSTFEI 180

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++IMGRRGVP +AD+Y  LI SYL KGEPADAKTALDSM+E GH P +SLFRSVMESLFE
Sbjct: 181 LRIMGRRGVPGEADSYRLLISSYLSKGEPADAKTALDSMLEGGHIPEASLFRSVMESLFE 240

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
           DGRVQTASRVMKSMVEKGVKEN+DLVAKILE L MRGHVEEALGRIDL+MQSG  P FDS
Sbjct: 241 DGRVQTASRVMKSMVEKGVKENMDLVAKILETLFMRGHVEEALGRIDLLMQSGCTPQFDS 300

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           LLSVL+EKGKTIAA+KLLDFCL RDC +D +SY+KVLDALL AGKTLNAYSIL KIMEKG
Sbjct: 301 LLSVLAEKGKTIAALKLLDFCLERDCNVDFSSYDKVLDALLEAGKTLNAYSILRKIMEKG 360

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKE 658
           GV+DW SS  LI  LNQEGNTKQADILSRMI+G    G  K+
Sbjct: 361 GVSDWCSSKDLIKSLNQEGNTKQADILSRMIKGRDKSGQSKK 402



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 156/357 (43%), Gaps = 30/357 (8%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D  +FE L+    K G +  +  +   M +L +      Y  L +   + G Y  A +  
Sbjct: 45  DNSIFEKLLSLMCKSGDLDAAADVLKAMIRLTIPTEPGHYGILIENFCKAGVYDRAIKLL 104

Query: 150 NKMLSE--------GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +K++ +         I+     YN M+       + E A  FF  +  +G+  D V +N 
Sbjct: 105 DKLIEKEIIIRPQSSIKLEASAYNPMIEYLCNHGQTEKAEVFFRQLMKKGVQ-DSVAFNN 163

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++ G+ +    D   ++   M  + +     SY  +I  Y++     DA    D M    
Sbjct: 164 LMCGHAKEGNSDSTFEILRIMGRRGVPGEADSYRLLISSYLSKGEPADAKTALDSMLEGG 223

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN-SVFMKLLGVQCKSGHLNA 320
             P A  + +++  L + G++    +V++ MVE+ +  K+N  +  K+L      GH   
Sbjct: 224 HIPEASLFRSVMESLFEDGRVQTASRVMKSMVEKGV--KENMDLVAKILETLFMRGH--- 278

Query: 321 AADVLKAMIRLSIPTEAG---HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
              V +A+ R+ +  ++G    +  L+    +      A+KLLD  +E++         +
Sbjct: 279 ---VEEALGRIDLLMQSGCTPQFDSLLSVLAEKGKTIAALKLLDFCLERDC--------N 327

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPVAFNNLIRGHSKEGNPDSA 433
           ++ SSY+ ++  L   G+T  A    R++M+K GV D  +  +LI+  ++EGN   A
Sbjct: 328 VDFSSYDKVLDALLEAGKTLNAYSILRKIMEKGGVSDWCSSKDLIKSLNQEGNTKQA 384



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 8/236 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MIE L   G+   A      + KKGVQ D   F  L+  + K+G    + +I  IM + G
Sbjct: 130 MIEYLCNHGQTEKAEVFFRQLMKKGVQ-DSVAFNNLMCGHAKEGNSDSTFEILRIMGRRG 188

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V     SY  L    L +G    AK   + ML  G  P    +  ++   F   +++TA 
Sbjct: 189 VPGEADSYRLLISSYLSKGEPADAKTALDSMLEGGHIPEASLFRSVMESLFEDGRVQTAS 248

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI--K 239
           R  + M  +G+  ++     ++        ++EA      + +    P   S  +++  K
Sbjct: 249 RVMKSMVEKGVKENMDLVAKILETLFMRGHVEEALGRIDLLMQSGCTPQFDSLLSVLAEK 308

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           G         AL++ D     D   +  +Y  +L  L +AGK +    +LR+++E+
Sbjct: 309 GKTIA-----ALKLLDFCLERDCNVDFSSYDKVLDALLEAGKTLNAYSILRKIMEK 359


>gi|326509863|dbj|BAJ87147.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 757

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 322/664 (48%), Positives = 444/664 (66%), Gaps = 7/664 (1%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHA---LQFFRWVERAGLFNHDRETHL 60
           R WTTR++N +R L P     +V+ V+  A  +  A   LQFFR+  R   F  +  T  
Sbjct: 91  RKWTTRMENSVRLLCPALTAPVVHGVISAAAAANRADLSLQFFRFAYRRAGFRPEPATFA 150

Query: 61  KMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
            ++ IL   G LNHARCILLD MP   V  DE     L+ +YG+ GI QE+VK+F +M +
Sbjct: 151 LLVPILASKGMLNHARCILLDTMPSFSVCPDEATVAALVAAYGRAGIPQEAVKLFRLMPE 210

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LG+ R+  SY+A+ K IL RGR  MA+R +N M+++G+ PT  TYN ++WGF L  K+E+
Sbjct: 211 LGITRTALSYNAVLKAILCRGREAMARRVYNAMIADGVAPTLSTYNTLIWGFGLCKKMES 270

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+R F DMK  G++ DV TYNT++N + R   ++ A K+F EM E  +E   ISY  MIK
Sbjct: 271 AVRVFGDMKGHGVAPDVTTYNTLLNAWVRKGDLESARKVFDEMPEAGLERNSISYNVMIK 330

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD-AGKMVEVQKVLREMVERYIP 298
           GYV   + ++AL +F EM    ++    T+  L+PGLCD  GK  E +K + +M ER + 
Sbjct: 331 GYVDANKVEEALGLFTEMGEKGLRLTEKTFAVLMPGLCDDEGKAAEARKAVADMAERRLT 390

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAI 357
           PKD SVF++L+   CK+G  + A +V K   +   +  +   YG+L+E+ C     D A+
Sbjct: 391 PKDKSVFLRLVSTLCKAGDFDGALEVHKKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAV 450

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           ++LD+L+EK  +L P+S + +EA +YNP+I++LC+NG T KAE FFRQLMKKGV D  AF
Sbjct: 451 QVLDELLEKGTLLSPKSPV-LEAPAYNPVIEYLCNNGNTDKAETFFRQLMKKGVDDKSAF 509

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N+LIRGH+KEG  D+A EI+ IM RRGVP D  ++  LI+S+L+K EPADAKTALDSM+E
Sbjct: 510 NSLIRGHAKEGALDAAKEILAIMTRRGVPTDPHSHALLIDSFLKKNEPADAKTALDSMME 569

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            GH P  +LF+SVM +LF DGRVQTASRVMKSM+EKG+ EN+D+  KI+EAL MRGHVEE
Sbjct: 570 HGHLPRPALFQSVMAALFNDGRVQTASRVMKSMIEKGITENMDMANKIVEALFMRGHVEE 629

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A+GR++LM+++G +P+ D LL+ L EK K + A KL DF L RD  +  ++Y++VL+AL 
Sbjct: 630 AIGRVNLMVENGCMPDLDKLLAALCEKDKVMEAQKLADFALDRDFEVSFSTYDRVLEALY 689

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
              KTL AYS+L KI  KGG+ D K  D L+  L   G +KQADILSR++    S  S++
Sbjct: 690 TEEKTLPAYSMLCKIKHKGGIVDQKGCDALMDSLKAGGYSKQADILSRILVENGSSTSKR 749

Query: 658 EKKQ 661
            KK 
Sbjct: 750 GKKS 753


>gi|212275340|ref|NP_001130930.1| uncharacterized protein LOC100192035 [Zea mays]
 gi|195614146|gb|ACG28903.1| hypothetical protein [Zea mays]
 gi|219885707|gb|ACL53228.1| unknown [Zea mays]
 gi|413935208|gb|AFW69759.1| hypothetical protein ZEAMMB73_548432 [Zea mays]
          Length = 748

 Score =  633 bits (1633), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 319/650 (49%), Positives = 442/650 (68%), Gaps = 7/650 (1%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNS---EHALQFFRWVERAGLFNHDRETHL 60
           R WTTRL+N IR L P  D  LV+ V+ GA ++   + ALQFFR+  R G F+ +  T  
Sbjct: 82  RPWTTRLENSIRLLSPTLDAPLVHGVISGAASAGRADLALQFFRFAYRRGGFSPEGATFA 141

Query: 61  KMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
            ++  L     LNHARC++LD MP   V  DE     LI +YG+  I QE+VK+F +M  
Sbjct: 142 LLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPN 201

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           +GV R+  SY+A+ K IL RGR  MA+R +N M+++G+ P   TYN ++WGF L  K+ET
Sbjct: 202 IGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMET 261

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+R F DMK  G++ DV TYNT++N + R   ++ A K+F EM  +  E   +SY  MIK
Sbjct: 262 AVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIK 321

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD-AGKMVEVQKVLREMVERYIP 298
           GYV   R ++A+ +F EM    ++ +  T+ AL+PGLCD  G++ E +K + +M ER + 
Sbjct: 322 GYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALMPGLCDDQGRVAEARKAVDDMAERRLT 381

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADV-LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           PKD SVF++L+   CK+G L+ A +V  K+     +  +   YG+L+E  C     + AI
Sbjct: 382 PKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGKCETAI 441

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           ++LD+L+EK  +L P+S + +EAS+YNP+I+ LC NG T KAE FFRQLMKKGV D  AF
Sbjct: 442 EVLDELMEKGTLLSPKSPV-LEASAYNPVIEFLCSNGSTAKAETFFRQLMKKGVDDKAAF 500

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N+LIRGH+KEG P++A EI+ IM RR VP D +++  L++S+L+K EPADAKTALDSM++
Sbjct: 501 NSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHALLVDSFLKKNEPADAKTALDSMMQ 560

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            GH P+ +LF+SVME+LF DGRVQTASRVMKSM+EKGV EN+D+  KILEAL  RGHVEE
Sbjct: 561 QGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEKGVTENMDVAHKILEALFTRGHVEE 620

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A+GR++LM+++G +P+ D LL  L + G+ + A KL DF L RD  +  ++Y++VL+AL 
Sbjct: 621 AIGRVNLMVENGCMPDLDKLLVGLCDNGRVMEAQKLADFALDRDFDVSFSTYDRVLEALY 680

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           A  KTL AYS+L KI  KGGV   K  D L+  L  EG +KQADILSR++
Sbjct: 681 AEEKTLPAYSMLCKIKNKGGVVSQKGCDDLMESLKSEGYSKQADILSRIL 730


>gi|194690470|gb|ACF79319.1| unknown [Zea mays]
          Length = 671

 Score =  632 bits (1631), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 319/650 (49%), Positives = 442/650 (68%), Gaps = 7/650 (1%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNS---EHALQFFRWVERAGLFNHDRETHL 60
           R WTTRL+N IR L P  D  LV+ V+ GA ++   + ALQFFR+  R G F+ +  T  
Sbjct: 5   RPWTTRLENSIRLLSPTLDAPLVHGVISGAASAGRADLALQFFRFAYRRGGFSPEGATFA 64

Query: 61  KMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
            ++  L     LNHARC++LD MP   V  DE     LI +YG+  I QE+VK+F +M  
Sbjct: 65  LLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPN 124

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           +GV R+  SY+A+ K IL RGR  MA+R +N M+++G+ P   TYN ++WGF L  K+ET
Sbjct: 125 IGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMET 184

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+R F DMK  G++ DV TYNT++N + R   ++ A K+F EM  +  E   +SY  MIK
Sbjct: 185 AVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIK 244

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD-AGKMVEVQKVLREMVERYIP 298
           GYV   R ++A+ +F EM    ++ +  T+ AL+PGLCD  G++ E +K + +M ER + 
Sbjct: 245 GYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALMPGLCDDQGRVAEARKAVDDMAERRLT 304

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADV-LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           PKD SVF++L+   CK+G L+ A +V  K+     +  +   YG+L+E  C     + AI
Sbjct: 305 PKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGKCETAI 364

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           ++LD+L+EK  +L P+S + +EAS+YNP+I+ LC NG T KAE FFRQLMKKGV D  AF
Sbjct: 365 EVLDELMEKGTLLSPKSPV-LEASAYNPVIEFLCSNGSTAKAETFFRQLMKKGVDDKAAF 423

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N+LIRGH+KEG P++A EI+ IM RR VP D +++  L++S+L+K EPADAKTALDSM++
Sbjct: 424 NSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHALLVDSFLKKNEPADAKTALDSMMQ 483

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            GH P+ +LF+SVME+LF DGRVQTASRVMKSM+EKGV EN+D+  KILEAL  RGHVEE
Sbjct: 484 QGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEKGVTENMDVAHKILEALFTRGHVEE 543

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A+GR++LM+++G +P+ D LL  L + G+ + A KL DF L RD  +  ++Y++VL+AL 
Sbjct: 544 AIGRVNLMVENGCMPDLDKLLVGLCDNGRVMEAQKLADFALDRDFDVSFSTYDRVLEALY 603

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           A  KTL AYS+L KI  KGGV   K  D L+  L  EG +KQADILSR++
Sbjct: 604 AEEKTLPAYSMLCKIKNKGGVVSQKGCDDLMESLKSEGYSKQADILSRIL 653


>gi|357140623|ref|XP_003571864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Brachypodium distachyon]
          Length = 751

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 318/663 (47%), Positives = 445/663 (67%), Gaps = 7/663 (1%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHA---LQFFRWVERAGLFNHDRETHL 60
           R WTTRL+N +R L P     LV+ V+  A  +  A   LQFFR+  R   F  +  T  
Sbjct: 85  RKWTTRLENSVRLLSPTLSAPLVHGVISSAAAANRADLALQFFRFAYRRAGFRPEPATFS 144

Query: 61  KMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
            +I +L     LNHARCILL+ MP   V  DE     L+ +YGK  I QE+VK+F +M +
Sbjct: 145 LLIPVLASNRMLNHARCILLETMPAFSVSPDEATVAALVAAYGKARIPQEAVKLFRLMPE 204

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LG+ R+  SY+A+ K IL RGR  MA+R +N M+++G+ P   TYN ++WGF LS K+E 
Sbjct: 205 LGITRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDLSTYNTLIWGFGLSEKMEA 264

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+R F DMK  G++ DV TYN +IN + R   ++ A K+F EM     E   +SY  MIK
Sbjct: 265 AVRVFGDMKGHGVTPDVTTYNNLINAWVRNGDLESARKVFDEMPGAGFERNSVSYNVMIK 324

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD-AGKMVEVQKVLREMVERYIP 298
           GYV  ++ ++A+ +F EM    ++ +  T+ AL+PGLCD  G+  E +K + +M ER + 
Sbjct: 325 GYVEAKKVEEAVGLFKEMGEKGLRSSEKTFAALMPGLCDDQGRTAEARKAVEDMAERRLT 384

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAI 357
           PKD +VF++L+   CK+G L+ A +V K   +   +  +   YG+L+++ C     D A+
Sbjct: 385 PKDKTVFLRLVTTLCKAGDLDGALEVHKKSGQFKHVLVDPRQYGVLMQSLCAGGKCDGAV 444

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           ++LD+L+EK  +L P+S + +EA +YNP+I++LC+NG T KAE FFRQLMKKGV D +AF
Sbjct: 445 EVLDELLEKGTLLSPKSPV-LEAPAYNPVIEYLCNNGNTKKAETFFRQLMKKGVDDKLAF 503

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N+LIRGH+KEG  ++A EI+ IM RRGVP D  ++  L++S+L+K EPADAKTALDSM+E
Sbjct: 504 NSLIRGHAKEGVLEAAQEILAIMTRRGVPTDPISHTLLVDSFLKKNEPADAKTALDSMME 563

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            GH P+ +LF+SVM +LF+DGRVQTASRVM+SM+EKGV EN+D+  KILEAL MRGHV+E
Sbjct: 564 QGHLPSPALFKSVMVALFDDGRVQTASRVMRSMIEKGVTENMDMAHKILEALFMRGHVDE 623

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A+GR++LM+++G +P+ D LL  L +K K + A KL DF L RD  +  ++Y+KVL+AL 
Sbjct: 624 AIGRVNLMVENGCMPDLDKLLVALCQKDKVMEAHKLADFALDRDFEVSFSTYDKVLEALY 683

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
              KTL AYS+L KI  KGGV D K  D L+  L  EG +KQADILSR++    S  S++
Sbjct: 684 TEEKTLPAYSMLCKIKHKGGVVDQKGCDALMDSLKAEGYSKQADILSRILVESGSSTSKR 743

Query: 658 EKK 660
            KK
Sbjct: 744 GKK 746


>gi|218189906|gb|EEC72333.1| hypothetical protein OsI_05540 [Oryza sativa Indica Group]
          Length = 747

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 317/663 (47%), Positives = 437/663 (65%), Gaps = 7/663 (1%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHAL---QFFRWVERAGLFNHDRETHL 60
           R WTTRL+N IR L P     LV+ V+ GA  +  A    QFFR+  R   F+ +  T  
Sbjct: 81  RPWTTRLENSIRLLSPTLAAPLVHGVISGAAAAGRADLALQFFRFAYRRAGFSPEPATFS 140

Query: 61  KMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
            +I IL     LNHARCILLD MP   +  +E     LI +YGK  I QESVK+F +M  
Sbjct: 141 LLIPILASHSMLNHARCILLDTMPSFSIAPEEATVAALIAAYGKANIPQESVKLFRLMPD 200

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LG+ R+  SY+A+ K IL RGR  MA+R +N M+++ + P   TYN ++WGF L  K+E 
Sbjct: 201 LGIARTALSYNAVLKAILCRGREAMARRIYNAMIADAVTPDLSTYNTLIWGFGLCKKMEA 260

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+R F DMK  G++ DV TYNT++N + R   ++ A K+F EM         +SY  MIK
Sbjct: 261 ALRVFGDMKDHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNVMIK 320

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD-AGKMVEVQKVLREMVERYIP 298
           GYV   + ++A+ +F EM    ++ +  T+ AL+PGLCD  G++VE +K + +M ER + 
Sbjct: 321 GYVEAGKVEEAVGLFSEMGEKGLRLSEKTFAALMPGLCDDEGRVVEARKAMDDMAERRLT 380

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAI 357
           PKD SVF++L+   C++G L+ A DV +   +   +  +   YG+L+E+ C     D A+
Sbjct: 381 PKDKSVFLRLVTTLCRAGDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAV 440

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           +++D+L+EK  +L P+S + +E  +YNP+I++LC NG T KAE FFRQLMKKGV D  AF
Sbjct: 441 EVMDELLEKGTLLSPKSPV-LEGPAYNPVIEYLCSNGNTSKAETFFRQLMKKGVDDKAAF 499

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N+LIRGH+KEG P++A EI+ IM RRGV  D +++  L++S+L+K EPADAKTALDSM+E
Sbjct: 500 NSLIRGHAKEGVPEAAQEILAIMTRRGVRTDPESHALLVDSFLKKNEPADAKTALDSMME 559

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            GH P+ SLF SVM +LF  GRVQTASRVMKSM+EKGV EN+D+  KILEAL MRGHVEE
Sbjct: 560 QGHVPSPSLFMSVMVALFNGGRVQTASRVMKSMIEKGVTENMDMAHKILEALFMRGHVEE 619

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A+GR++LM+++G +P+ D LL  L E  K + A KL DF L RD  +  ++Y++VL+AL 
Sbjct: 620 AIGRVNLMVENGCLPDLDKLLIALCENDKVMEAHKLADFALDRDFDVSFSTYDRVLEALY 679

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
              KTL AYS+L KI  KGGV D K  D L+  L   G +KQADILSR++    S  S++
Sbjct: 680 TEEKTLPAYSMLCKIKNKGGVVDQKGCDALMDSLKAGGYSKQADILSRILAENASSTSKR 739

Query: 658 EKK 660
            K+
Sbjct: 740 GKR 742


>gi|115443739|ref|NP_001045649.1| Os02g0110400 [Oryza sativa Japonica Group]
 gi|41052925|dbj|BAD07836.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535180|dbj|BAF07563.1| Os02g0110400 [Oryza sativa Japonica Group]
 gi|215706484|dbj|BAG93340.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222622028|gb|EEE56160.1| hypothetical protein OsJ_05062 [Oryza sativa Japonica Group]
          Length = 747

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 317/663 (47%), Positives = 437/663 (65%), Gaps = 7/663 (1%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHAL---QFFRWVERAGLFNHDRETHL 60
           R WTTRL+N IR L P     LV+ V+ GA  +  A    QFFR+  R   F+ +  T  
Sbjct: 81  RPWTTRLENSIRLLSPTLAAPLVHGVISGAAAAGRADLALQFFRFAYRRAGFSPEPATFS 140

Query: 61  KMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
            +I IL     LNHARCILLD MP   +  +E     LI +YGK  I QESVK+F +M  
Sbjct: 141 LLIPILASHRMLNHARCILLDTMPSFSIAPEEATVAALIAAYGKANIPQESVKLFRLMPD 200

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LG+ R+  SY+A+ K IL RGR  MA+R +N M+++ + P   TYN ++WGF L  K+E 
Sbjct: 201 LGIARTALSYNAVLKAILCRGREAMARRIYNAMIADAVTPDLSTYNTLIWGFGLCKKMEA 260

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+R F DMK  G++ DV TYNT++N + R   ++ A K+F EM         +SY  MIK
Sbjct: 261 ALRVFGDMKDHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNVMIK 320

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD-AGKMVEVQKVLREMVERYIP 298
           GYV   + ++A+ +F EM    ++ +  T+ AL+PGLCD  G++VE +K + +M ER + 
Sbjct: 321 GYVEAGKVEEAVGLFSEMGEKGLRLSEKTFAALMPGLCDDEGRVVEARKAMDDMAERRLT 380

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAI 357
           PKD SVF++L+   C++G L+ A DV +   +   +  +   YG+L+E+ C     D A+
Sbjct: 381 PKDKSVFLRLVTTLCRAGDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAV 440

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           +++D+L+EK  +L P+S + +E  +YNP+I++LC NG T KAE FFRQLMKKGV D  AF
Sbjct: 441 EVMDELLEKGTLLSPKSPV-LEGPAYNPVIEYLCSNGNTSKAETFFRQLMKKGVDDKAAF 499

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N+LIRGH+KEG P++A EI+ IM RRGV  D +++  L++S+L+K EPADAKTALDSM+E
Sbjct: 500 NSLIRGHAKEGVPEAAQEILAIMTRRGVRTDPESHALLVDSFLKKNEPADAKTALDSMME 559

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            GH P+ SLF SVM +LF  GRVQTASRVMKSM+EKGV EN+D+  KILEAL MRGHVEE
Sbjct: 560 QGHVPSPSLFMSVMVALFNSGRVQTASRVMKSMIEKGVTENMDMAHKILEALFMRGHVEE 619

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A+GR++LM+++G +P+ D LL  L E  K + A KL DF L RD  +  ++Y++VL+AL 
Sbjct: 620 AIGRVNLMVENGCLPDLDKLLIALCENDKVMEAHKLADFALDRDFDVSFSTYDRVLEALY 679

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
              KTL AYS+L KI  KGGV D K  D L+  L   G +KQADILSR++    S  S++
Sbjct: 680 TEEKTLPAYSMLCKIKNKGGVVDQKGCDALMDSLKAGGYSKQADILSRILAENASSTSKR 739

Query: 658 EKK 660
            K+
Sbjct: 740 GKR 742


>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/648 (34%), Positives = 365/648 (56%), Gaps = 12/648 (1%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W+  LQ+ +  L P      V   L   +    AL FFRWVE  G F H+ +++  MIEI
Sbjct: 78  WSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAKG-FTHNEQSYFLMIEI 136

Query: 66  LGRVGKLNHARCILLDMPKK---GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           LGR   LN AR  +  + KK    V+  +  F  LI SYG  G+ QES+K+F  MK++GV
Sbjct: 137 LGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGV 196

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAI 181
             SV ++++L  ++L+RGR  MAK+ F++ML + G+ P  +T+N+++ GF ++  ++   
Sbjct: 197 SPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGF 256

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM--KEKNIEPTVISYTTMIK 239
            FF++M       DVVTYNT+++G  R  K+  A  +   M  K  N+ P V++YTT+I+
Sbjct: 257 WFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIR 316

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER--YI 297
           GY   +   +AL +  EM S  +KPN +TY  L+ GLC+A K+ +++++L  MV    +I
Sbjct: 317 GYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFI 376

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           P  D      L+   C  G L  A  V + M  L +  ++  Y +L+ + C+   + RA 
Sbjct: 377 P--DTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAE 434

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           +  D+L EKEI+L       + A+ YNPM ++LC NG+T KAE  FRQLMK+G  DP ++
Sbjct: 435 EFFDELAEKEILLHDVGCKPLVAA-YNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSY 493

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
             LI GH +EG P++ F+++ +M RR    DA+ Y  +I+  L+KG+P  A  +L+ M++
Sbjct: 494 KTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLK 553

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
             H P +++F S++ +L E G    ++ ++K M+E+ +++N+DL    +  L   G  ++
Sbjct: 554 SSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDK 613

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A   I L+ ++G +   + L+S L +  K + A K+L F L +   +D+     V+  L 
Sbjct: 614 AFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLC 673

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            A K   A+++ ++++EKG        + L   L  EG   +A  +S+
Sbjct: 674 KAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFVSK 721


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/628 (34%), Positives = 358/628 (57%), Gaps = 12/628 (1%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V+ VL   K    ALQFF W    G F H+ +++  M+EILGR   LN AR  L  + ++
Sbjct: 89  VFEVLRLIKTPSKALQFFNWAPELG-FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRR 147

Query: 86  G---VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               V+ ++  F  LI SYGK G+ QESV++F+ MK +GV  SV ++++L  ++L+RGR 
Sbjct: 148 SNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRT 207

Query: 143 MMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            MA+  F++MLS  G+ P  +T+N+++ GF  +  ++   RFF++M       D+VTYNT
Sbjct: 208 NMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNT 267

Query: 202 MINGYNRFKKMDEAEKLFAEM--KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           +++G  R  K++ A  +   M  K  N+ P V++YTT+++GY      D+AL +F+EM S
Sbjct: 268 LVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVS 327

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER--YIPPKDNSVFMKLLGVQCKSGH 317
             +KPN +TY  L+ GLC+  K+ +++++    +    +IP  D      L+   C +G+
Sbjct: 328 KGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIP--DTCTLNTLMNAHCNAGN 385

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           LN A +V + M+ L++  ++  Y +LI N C+   ++RA +L D+L EKEI+LR      
Sbjct: 386 LNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTP 445

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           + A+ Y  M + LC NG+T KAE  FRQLMK+G  DP++F  LI+GH +EG  ++ +E++
Sbjct: 446 LVAA-YKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELL 504

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
            +M RR    D + Y  LI+  L+KGEP  A   L+ MI+  H P +S F S++  L   
Sbjct: 505 VLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAK 564

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
           G    ++R +  M+E  +++N++L    +  L   G  ++A   + L+  +G V + + L
Sbjct: 565 GCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGYVVDMEEL 624

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  LS   K + A KLL FCL +   +D+   + V++ L    +   A+ + ++++EKG 
Sbjct: 625 IGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYELVEKGN 684

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADILSR 645
               +  + L   L   G  ++   LS+
Sbjct: 685 NQPLRCLENLRVALEARGRLEEVKFLSK 712


>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 216/648 (33%), Positives = 353/648 (54%), Gaps = 40/648 (6%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W+  LQ+ +  L P      V   L   +    AL FFRWVE  G F H+ +++  MIEI
Sbjct: 78  WSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAKG-FTHNEQSYFLMIEI 136

Query: 66  LGRVGKLNHARCILLDMPKK---GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           LGR   LN AR  +  + KK    V+  +  F  LI SYG  G+ QES+K+F  MK++GV
Sbjct: 137 LGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGV 196

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAI 181
             SV ++++L  ++L+RGR  MAK+ F++ML + G+ P  +T+N+++ GF ++  ++   
Sbjct: 197 SPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGF 256

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM--KEKNIEPTVISYTTMIK 239
            FF++M       DVVTYNT+++G  R  K+  A  +   M  K  N+ P V++YTT+I+
Sbjct: 257 WFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIR 316

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER--YI 297
           GY   +   +AL +  EM S  +KPN +TY  L+ GLC+A K+ +++++L  MV    +I
Sbjct: 317 GYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFI 376

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           P  D      L+   C  G L  A  V + M  L +  ++  Y +L+ + C+   + RA 
Sbjct: 377 P--DTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAE 434

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           +  D+L EKEI+L       + A+ YNPM ++LC NG+T KAE  FRQLMK+G  DP ++
Sbjct: 435 EFFDELAEKEILLHDVGCKPLVAA-YNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSY 493

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
             LI GH +EG P++ F+++ +M RR    DA+ Y  +I+  L+KG+P  A  +L+ M++
Sbjct: 494 KTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLK 553

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
             H P +++F S++ +L E G    ++ ++K M+E+ +++N+DL    +E          
Sbjct: 554 SSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTME---------- 603

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
                              L+S L +  K + A K+L F L +   +D+     V+  L 
Sbjct: 604 ------------------ELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLC 645

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            A K   A+++ ++++EKG        + L   L  EG   +A  +S+
Sbjct: 646 KAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFVSK 693


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/655 (31%), Positives = 365/655 (55%), Gaps = 12/655 (1%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
           + W+T L++ + +L P       + VL    +   A +FF W  R G F HD  ++  M+
Sbjct: 8   KPWSTELESSLFSLSPSISKTTFFQVLRFIASPPKAFEFFNWASRNG-FAHDSRSYFMML 66

Query: 64  EILGRVGKLNHARCILLDMPKKG---VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +ILGR G LN AR  L  + ++    V+ ++     L+ SYG  G+  E++K+F +MK  
Sbjct: 67  DILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSS 126

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLET 179
           GV  SV ++++L  ++L+RGR  MA   F++M  + G+ P  +T+N+++ GF  +  ++ 
Sbjct: 127 GVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDE 186

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM--KEKNIEPTVISYTTM 237
             RFF++M       DVVTYNT+++G  R  K+  A  +   M  K K++ P V++YTT+
Sbjct: 187 GFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTL 246

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV--ER 295
           ++GY   +  D+AL +F+EM S  +KPN +TY  L+ GLC+  K  +++++L   V    
Sbjct: 247 VRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRG 306

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
           ++P  D   +  L+  QC +G+ + A  + K M  L +  ++  Y +LI N C+   ++R
Sbjct: 307 FVP--DTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFER 364

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           A +L DKL +++I+LR      + A+ YNP+   LC NG+T KAE  FRQLMKKG  DP 
Sbjct: 365 AEQLFDKLSDEDILLRDDGCTPLVAA-YNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPP 423

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           ++  LI GH KEG  ++ ++++  M RR    D + Y+ LI  +L+KGEP  A   L+ M
Sbjct: 424 SYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERM 483

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           ++  + P +S+F S++  L ++   + ++  +  M+++ +++N++L    +  L   G  
Sbjct: 484 LKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLR 543

Query: 536 EEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
            +A   ++L+  +G + + + L+  + + GK + A K+L FCL +   +D+     V++ 
Sbjct: 544 IKAFQIVELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEG 603

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           L    + L A+ + + ++EK         + L   L   G +++A  +S+ +  E
Sbjct: 604 LCKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTALEAGGRSEEAKFVSKRMPDE 658


>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/650 (33%), Positives = 363/650 (55%), Gaps = 11/650 (1%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
           + W+  L   + +         V+  L   K    A  FF W+   G F+H+ +T+  M+
Sbjct: 69  KPWSDEL---LSSFTTSLSKTTVFQTLRHIKVPTKAFLFFNWIHEKG-FSHNPQTYFIML 124

Query: 64  EILGRVGKLNHARCILLDMPKKG---VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           EILGR   LN AR  L  + K+    V+ ++  F  LI SYG+ G+ +ESVK+F+ MK +
Sbjct: 125 EILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLI 184

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLET 179
           GV   V +++++  ++L+RGR  MAK  +++ML + G++P  +TYN+++ GF  +  ++ 
Sbjct: 185 GVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDE 244

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM--KEKNIEPTVISYTTM 237
              FF++M S     DVVTYNT+++G  R  K+  A  L   M  K K++ P V++YTT+
Sbjct: 245 GFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTL 304

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I+GY   +  D+AL I +EM    +KPN VTY  L+ GLC+A K  +++++L +M     
Sbjct: 305 IRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGG 364

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D   F  L+   C +G+L+ A  V + M +L +  ++  Y +LI   C+   Y +A 
Sbjct: 365 SIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAE 424

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
            L D+L EKEI+L       + A+SY  M Q+LC NG+T KAE   RQLMK+G  DP+++
Sbjct: 425 MLFDELFEKEILLSSYGPKPL-AASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSY 483

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
             +I GH KEG+ ++ + ++  M RR    D D Y  LI+ +LRK +P  AK  L+ M++
Sbjct: 484 QIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLK 543

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
             + P +S + S++  L E G V  ++ V+  M+E+ +++N++   K L+ L  RG  ++
Sbjct: 544 SSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQDK 603

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A    +L+ ++G     D ++  L  K + + A KLL F L  +  ID+     V+  L 
Sbjct: 604 AFKITELIYKNGFCVKMDEVVQFLCNKRRALEACKLLLFSLKNNENIDIGLCNIVILDLC 663

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
              K   A+S+ +++++KG   D    + L+A L   G T++A  +S+ +
Sbjct: 664 KLNKASEAFSLCYELVDKGLHQDLICLNDLVAALEAGGRTEEAAFISKRV 713


>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Glycine max]
          Length = 729

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/638 (34%), Positives = 360/638 (56%), Gaps = 8/638 (1%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + +L+       V   L   K+   AL+FF+W ++ G F+H  E++  M+EILGR   LN
Sbjct: 69  LSSLLITISKTTVLRTLRLIKDPSKALRFFKWTQQKG-FSHTPESYFIMLEILGRERNLN 127

Query: 74  HARCILLDMPK--KG-VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            AR  L  + K  KG V+ ++  F  LI SY + G+ +ES+K+F  MK + V  SV +++
Sbjct: 128 VARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFN 187

Query: 131 ALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           +L  ++L+RGR  MAK  +++ML + G+ P   TYNV++ GF  +  ++   RFF +M+S
Sbjct: 188 SLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMES 247

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK--NIEPTVISYTTMIKGYVAVERA 247
                DVVTYNT+++G  R  K+  A  L   M +K   + P V++YTT+I+GY   +  
Sbjct: 248 FNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEV 307

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           ++AL + +EM S  +KPN +TY  L+ GLC+A K+ +++ VL  M        D   F  
Sbjct: 308 EEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNT 367

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++ + C +G+L+ A  V ++M +  IP ++  Y  LI + C+   YD A +L D+L EKE
Sbjct: 368 IIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKE 427

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKE 427
           I+L    +  + A+SYNP+ + LC +G+T KAE   RQLMK+G  DP ++  +I GH KE
Sbjct: 428 ILLSKFGSKPL-AASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKE 486

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G  +S +E++  M RR    D + Y  LI+ +L+K +P  AK  L+ M++  + P +S +
Sbjct: 487 GAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTW 546

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            SV+  L E G    +S V+  M+EK V++N++L  + L+ L  R   E A   I+L+ +
Sbjct: 547 HSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYK 606

Query: 548 SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
           +G     + +   L ++GK   A KLL F L     +D+      +  L    K   A+S
Sbjct: 607 NGYYVKIEEVAQFLLKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFS 666

Query: 608 ILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
           + ++++E G   +    D LIA L + G  ++A  +S+
Sbjct: 667 LCYELVENGLHQELTCLDDLIAALEEGGKREEAAFISK 704


>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 211/645 (32%), Positives = 347/645 (53%), Gaps = 42/645 (6%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W+  LQ+ +  L P      V   L   +    AL FFRWVE  G F H+ +++  MIEI
Sbjct: 171 WSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAKG-FTHNEQSYFLMIEI 229

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           LGR   LN AR  +  + KK              S G      ES+K+F  MK++GV  S
Sbjct: 230 LGRSRNLNAARNFVFSIEKK--------------SGGA-----ESIKVFKTMKEIGVSPS 270

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           V ++++L  ++L+RGR  MAK+ F++ML + G+ P  +T+N+++ GF ++  ++    FF
Sbjct: 271 VVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFF 330

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM--KEKNIEPTVISYTTMIKGYV 242
           ++M       DVVTYNT+++G  R  K+  A  +   M  K  N+ P V++YTT+I+GY 
Sbjct: 331 KEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYC 390

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER--YIPPK 300
             +   +AL +  EM S  +KPN +TY  L+ GLC+A K+ +++++L  MV    +IP  
Sbjct: 391 MKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIP-- 448

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D      L+   C  G L  A  V + M  L +  ++  Y +L+ + C+   + RA +  
Sbjct: 449 DTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFF 508

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           D+L EKEI+L       + A+ YNPM ++LC NG+T KAE  FRQLMK+G  DP ++  L
Sbjct: 509 DELAEKEILLHDVGCKPLVAA-YNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTL 567

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I GH +EG P++ F+++ +M RR    DA+ Y  +I+  L+KG+P  A  +L+ M++  H
Sbjct: 568 ILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSH 627

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P +++F S++ +L E               E+ +++N+DL    +  L   G  ++A  
Sbjct: 628 LPTTAIFHSILAALVEK--------------ERRIRQNIDLSTHTVRLLYKSGLQDKAFM 673

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            I L+ ++G +   + L+S L +  K + A K+L F L +   +D+     V+  L  A 
Sbjct: 674 TIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAH 733

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
           K   A+++ ++++EKG        + L   L  EG   +A  +S+
Sbjct: 734 KVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFVSK 778


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 206/638 (32%), Positives = 343/638 (53%), Gaps = 9/638 (1%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V   L   +++  ALQFF W +  G + H  +++  M+EILGR   LN AR  L  + K+
Sbjct: 82  VLQTLGFLRDTSKALQFFNWAQEMG-YTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR 140

Query: 86  G---VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               V+ +   F  L+ ++ + G+ QES+K+F IMK  GV  SV ++++L  ++L+RGR 
Sbjct: 141 SRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRT 200

Query: 143 MMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            MAK+ +++MLS  G+ P   T+N+++ GF ++  ++   R F D+   G   DVVTYNT
Sbjct: 201 NMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNT 260

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIE--PTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           +++G  R  K+  A  +   M +K+++  P V++YTT+I+GY A    + AL +F+EM +
Sbjct: 261 LVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVN 320

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             +K N +TY  L+ GLC+A K  +++ +L           D   F  L+   C +G+L+
Sbjct: 321 QGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLD 380

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  V + M  L I  ++  Y  L+ + C+   Y++A  LLDKL+E++I+L       + 
Sbjct: 381 DALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLV 440

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           A+ YNP+ ++LC  G+T KAE  FRQLM++G  DP ++  LI GH KEG  +S +E++ +
Sbjct: 441 AA-YNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVL 499

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M R+    D + Y  LI   L   +P  A  +L+ M+   H P SS F S++  L E GR
Sbjct: 500 MLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGR 559

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
              ++ +++ M++K +++NL      +  L   G  ++A   + L+   G     + L+ 
Sbjct: 560 ASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIR 619

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            L    K I   KLL F L     +D+     V+  L    K   A+S+ +K++E G   
Sbjct: 620 YLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQ 679

Query: 620 DWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGEMSRGSQ 656
                ++L   L   G  ++A+ +  RM R   S+ S 
Sbjct: 680 QLSCQNQLKVSLKAGGKLEEAESVQKRMERRLKSKNSN 717


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 201/626 (32%), Positives = 338/626 (53%), Gaps = 8/626 (1%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V   L   +++  ALQFF W +  G + H  +++  M+EILGR   LN AR  L  + K+
Sbjct: 82  VLQTLGFLRDTSKALQFFNWAQEMG-YTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR 140

Query: 86  G---VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               V+ +   F  L+ ++ + G+ QES+K+F IMK  GV  SV ++++L  ++L+RGR 
Sbjct: 141 SRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRT 200

Query: 143 MMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            MAK+ +++MLS  G+ P   T+N+++ GF ++  ++   R F D+   G   DVVTYNT
Sbjct: 201 NMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNT 260

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIE--PTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           +++G  R  K+  A  +   M +K+++  P V++YTT+I+GY A    + AL +F+EM +
Sbjct: 261 LVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVN 320

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             +K N +TY  L+ GLC+A K  +++ +L           D   F  L+   C +G+L+
Sbjct: 321 QGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLD 380

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  V + M  L I  ++  Y  L+ + C+   Y++A  LLDKL+E++I+L       + 
Sbjct: 381 DALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLV 440

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           A+ YNP+ ++LC  G+T KAE  FRQLM++G  DP ++  LI GH KEG  +S +E++ +
Sbjct: 441 AA-YNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVL 499

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M R+    D + Y  LI   L   +P  A  +L+ M+   H P SS F S++  L E GR
Sbjct: 500 MLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGR 559

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
              ++ +++ M++K +++NL      +  L   G  ++A   + L+   G     + L+ 
Sbjct: 560 TSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIR 619

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            L    K I   KLL F L     +D+     V+  L    K   A+S+ +K++E G   
Sbjct: 620 YLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQ 679

Query: 620 DWKSSDKLIAGLNQEGNTKQADILSR 645
                ++L   L      ++A+ +S+
Sbjct: 680 QLSCQNQLKVSLEAGEKLEEAEFVSK 705



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 117/557 (21%), Positives = 234/557 (42%), Gaps = 94/557 (16%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML---SEGI-EPTRH 162
             ++++ F+  +++G   + +SY ++ + IL R R++   R F   +   S GI +    
Sbjct: 92  TSKALQFFNWAQEMGYTHTEQSYFSMLE-ILGRNRHLNTARNFLFSIEKRSRGIVKLEAR 150

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
            +N ++  F  +   + +I+ F  MKS G+S  VVT+N+++    +  + + A+K++ EM
Sbjct: 151 FFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM 210

Query: 223 -KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
                + P   ++  +I+G+      DD  RIF+++  F  +P+ VTY  L+ GLC A  
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRA-- 268

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG--H 339
                                             G +  A +V+K M + S+        
Sbjct: 269 ----------------------------------GKVTVAYNVVKGMGKKSVDLNPNVVT 294

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI  +C     ++A+ + +++V +         L     +YN +I+ LC   +  K 
Sbjct: 295 YTTLIRGYCAKREIEKALAVFEEMVNQ--------GLKANNITYNTLIKGLCEARKFEKI 346

Query: 400 EIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           +         G   P    FN L+  H   GN D A ++ + M    +  D+  Y  L+ 
Sbjct: 347 KDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVR 406

Query: 458 SYLRKGEPADAKTALDSMIE-------DGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           S  + G    A+  LD ++E       DG  P  + +  + + L E G+ + A +  + +
Sbjct: 407 SLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQL 466

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAA 570
           + +G ++                                  P++ +L+    ++G   + 
Sbjct: 467 MRRGTQDP---------------------------------PSYKTLIMGHCKEGTFESG 493

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            +LL   L +D + D  +YE +++ LL   K L A   L K++      +  +   ++A 
Sbjct: 494 YELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAK 553

Query: 631 LNQEGNTKQADILSRMI 647
           L ++G T ++  L +++
Sbjct: 554 LLEQGRTSESASLIQLM 570


>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
 gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 338/616 (54%), Gaps = 13/616 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG---VQWDEDMFE 95
            L+FF WV   G F+H  ++   M+E LGR   LN AR  L  + ++    V+  +  F 
Sbjct: 84  GLRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML-S 154
            LI SYG  G+ QESVK+F  MKQ+G+  SV ++++L  ++L+RGR  MA   F++M  +
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G+ P  +T+N ++ GF  +  ++ A R F+DM+    + DVVTYNT+I+G  R  K+  
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262

Query: 215 AEKLFAEM--KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           A  + + M  K  ++ P V+SYTT+++GY   +  D+A+ +F +M S  +KPNAVTY  L
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322

Query: 273 LPGLCDAGKMVEVQKVL---REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           + GL +A +  E++ +L    +    + P  D   F  L+   C +GHL+AA  V + M+
Sbjct: 323 IKGLSEAHRYDEIKDILIGGNDAFTTFAP--DACTFNILIKAHCDAGHLDAAMKVFQEML 380

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
            + +  ++  Y +LI   C    +DRA  L ++L EKE++L       + A++YNPM ++
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL-AAAYNPMFEY 439

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           LC NG+T +AE  FRQLMK+GV DP ++  LI GH +EG    A+E++ +M RR    D 
Sbjct: 440 LCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL 499

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
           + Y  LI+  L+ GE   A   L  M+   + P ++ F SV+  L +      +  ++  
Sbjct: 500 ETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTL 559

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA 569
           M+EK +++N+DL  +++  L      E+A   + L+  +G +   + LL  L E  K + 
Sbjct: 560 MLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLD 619

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A  L+ FCL +  ++D+ +   V++ L    +   A+S+  +++E G          L  
Sbjct: 620 AHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRN 679

Query: 630 GLNQEGNTKQADILSR 645
            L   G  ++   +S+
Sbjct: 680 ALEAAGKWEELQFVSK 695


>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 712

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 194/615 (31%), Positives = 329/615 (53%), Gaps = 12/615 (1%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG---VQWDEDMFE 95
            L+FF WV   G F+H  ++   M+E LGR   LN AR  L  + K+    V+  +  F 
Sbjct: 87  GLRFFDWVYNKG-FSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFN 145

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML-S 154
            LI SYG  G+ QESV +F  MK++G+  SV ++++L  ++L+RGR  MA   F++M  +
Sbjct: 146 SLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRT 205

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G+ P  +T+N ++ GF  +  ++ A   F++M+    + DVVTYNT+I+G  R  K+  
Sbjct: 206 YGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKI 265

Query: 215 AEKLFAEM--KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           A  L   M  K   + P ++SYTT+++GY   +  D+AL +F EM +  +KPNAVTY  L
Sbjct: 266 AHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTL 325

Query: 273 LPGLCDAGKMVEVQKVL--REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           + GL +A +  E++  L   +    + P  D   F  L+   C +GHL+AA  V + M+ 
Sbjct: 326 IKGLSEAHRYDEIKGFLIGGDAFTTFSP--DACTFNILIKAHCDAGHLDAAMKVFQEMLN 383

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
           + +  ++  Y +LI   C    +D+A  L ++L EKE++L       + A++YN M ++L
Sbjct: 384 MKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPL-AAAYNLMFEYL 442

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           C NG+  +AE  FRQLMK+G  DP ++  LI G  +EG   +A+E++ +M RR    D +
Sbjct: 443 CANGKAKQAEKVFRQLMKRGAQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPE 502

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  LI+  L+ GE   A   L  M+   + P ++ F SV+  L +      +  ++  M
Sbjct: 503 TYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVM 562

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAA 570
           +EK +++N+DL  + +  +      E+A   + L+  +G +   + LL  L E  K + A
Sbjct: 563 LEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIVRLLYDNGYLIKMEELLDFLCENRKLLDA 622

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             L+ FCL +  ++D+ +   +++ L    +   A+S+  +++E G          L   
Sbjct: 623 HTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLTNA 682

Query: 631 LNQEGNTKQADILSR 645
           L   G  ++   +S+
Sbjct: 683 LEAAGKWEELQFVSK 697


>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
          Length = 691

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 194/616 (31%), Positives = 326/616 (52%), Gaps = 32/616 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG---VQWDEDMFE 95
            L+FF WV   G F+H  ++   M+E LGR   LN AR  L  + ++    V+  +  F 
Sbjct: 84  GLRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM-LS 154
            LI SYG  G+ QESVK+F  MKQ+G+  SV ++++L  ++L+RGR  MA   F++M  +
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G+ P  +T+N ++ GF  +  ++ A R F+DM+  G                   K+  
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAG-------------------KVKI 243

Query: 215 AEKLFAEM--KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           A  + + M  K  ++ P V+SYTT+++GY   +  D+A+ +F +M S  +KPNAVTY  L
Sbjct: 244 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 303

Query: 273 LPGLCDAGKMVEVQKVL---REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           + GL +A +  E++ +L    +    + P  D   F  L+   C +GHL+AA  V + M+
Sbjct: 304 IKGLSEAHRYDEIKDILIGGNDAFTTFAP--DACTFNILIKAHCDAGHLDAAMKVFQEML 361

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
            + +  ++  Y +LI   C    +DRA  L ++L EKE++L       + A++YNPM ++
Sbjct: 362 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL-AAAYNPMFEY 420

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           LC NG+T +AE  FRQLMK+GV DP ++  LI GH +EG    A+E++ +M RR    D 
Sbjct: 421 LCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL 480

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
           + Y  LI+  L+ GE   A   L  M+   + P ++ F SV+  L +      +  ++  
Sbjct: 481 ETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTL 540

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA 569
           M+EK +++N+DL  +++  L      E+A   + L+  +G +   + LL  L E  K + 
Sbjct: 541 MLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLD 600

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A  L+ FCL +  ++D+ +   V++ L    +   A+S+  +++E G          L  
Sbjct: 601 AHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRN 660

Query: 630 GLNQEGNTKQADILSR 645
            L   G  ++   +S+
Sbjct: 661 ALEAAGKWEELQFVSK 676


>gi|357145312|ref|XP_003573599.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Brachypodium distachyon]
          Length = 627

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 160/544 (29%), Positives = 283/544 (52%), Gaps = 25/544 (4%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLK------LETA 180
           S+++L   +LRRGR   A       L S    P   T N +L G   +        L   
Sbjct: 86  SFNSLLSALLRRGRLRAANALLAAFLRSRTASPDAATLNTLLHGLSAAAPRASPPALVNL 145

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK------NIEPTVISY 234
            RF  +  +   + D V+YN+++    R   +  A KLF  M+ +      ++ P V++Y
Sbjct: 146 FRFLPE--TYAFAPDAVSYNSLLCALCRAGDLPAARKLFDVMRVRATGGNGSVPPDVVTY 203

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           TTMI+ Y A   AD+AL +F  M +  V PN +TY  ++ G C+ G++  V+ +L    +
Sbjct: 204 TTMIRAYCARRLADEALAVFRMMAADGVPPNRITYNTMVQGFCEVGRVDLVKGLLE--TD 261

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
            + P  D   F  L+   C+ G +  A +V   M+ L +  ++  Y  +I   C+   + 
Sbjct: 262 SFKP--DTCTFNTLMATHCREGQVKEAMEVFGQMVELRVSRDSASYSTVIRGLCENGEFV 319

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLD 413
           RA +L+D+LVEKE++ +    + + A+ YNP+  +LC NG+  KA + F QL+ ++  +D
Sbjct: 320 RAEELVDELVEKEVLKKRGGCVPLIAA-YNPVFVYLCENGKANKARVLFGQLLDQRSKVD 378

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
             AF  LI GH KEG+ +  +++V  M +R +  D + YI +++ + R+G    A  AL 
Sbjct: 379 FAAFKTLILGHCKEGDFEEGYQLVLSMLKRDLVPDDECYIAVVDGFSRRGRMKIAWEALH 438

Query: 474 SMIEDGHSPASSLFRSVMESLFE-DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
            M++ G  P++S F SV+  L + DG  + A+ +++ M+E+ +++NLDL   ++++LL  
Sbjct: 439 RMLDSGLRPSTSTFHSVLLGLLKKDGCAKEAADLIEIMLERNIRQNLDLSTNMIDSLLKS 498

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
              E A   I  +   G     ++L+  L E+ K I A +L  F L +   + +A    V
Sbjct: 499 NLNERAYRIITSLYDHGYYIKMETLIESLCEEKKFIEAAELTLFSLQKHHELGVAVCSMV 558

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA---GLNQEGNTKQADILSRMIRG 649
           LD L  AG+  +A+ + ++++E  G +   +   L+A    L ++G  K+AD +++ +R 
Sbjct: 559 LDGLCTAGRASDAFRLFYELIENRGTSAAVAPSSLVALYHALKEDGKMKEADFIAKQMRR 618

Query: 650 EMSR 653
             +R
Sbjct: 619 AAAR 622



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/468 (19%), Positives = 194/468 (41%), Gaps = 71/468 (15%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMK------QLGVERSVKSYDALFKLILRRGRYM 143
           D   +  L+ +  + G +  + K+FD+M+         V   V +Y  + +    R    
Sbjct: 158 DAVSYNSLLCALCRAGDLPAARKLFDVMRVRATGGNGSVPPDVVTYTTMIRAYCARRLAD 217

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F  M ++G+ P R TYN M+ GF    +++      E   +     D  T+NT++
Sbjct: 218 EALAVFRMMAADGVPPNRITYNTMVQGFCEVGRVDLVKGLLE---TDSFKPDTCTFNTLM 274

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
             + R  ++ EA ++F +M E  +     SY+T+I+                        
Sbjct: 275 ATHCREGQVKEAMEVFGQMVELRVSRDSASYSTVIR------------------------ 310

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD----------NSVFMKLLGVQC 313
                      GLC+ G+ V  ++++ E+VE+ +  K           N VF+ L    C
Sbjct: 311 -----------GLCENGEFVRAEELVDELVEKEVLKKRGGCVPLIAAYNPVFVYL----C 355

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           ++G  N A  +   ++      +   +  LI   CK   ++   +L+  +++++++    
Sbjct: 356 ENGKANKARVLFGQLLDQRSKVDFAAFKTLILGHCKEGDFEEGYQLVLSMLKRDLV---- 411

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRG-HSKEGNPD 431
                +   Y  ++      G+   A     +++  G+    + F++++ G   K+G   
Sbjct: 412 ----PDDECYIAVVDGFSRRGRMKIAWEALHRMLDSGLRPSTSTFHSVLLGLLKKDGCAK 467

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A ++++IM  R + ++ D    +I+S L+      A   + S+ + G+        +++
Sbjct: 468 EAADLIEIMLERNIRQNLDLSTNMIDSLLKSNLNERAYRIITSLYDHGYYIK---METLI 524

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           ESL E+ +   A+ +    ++K  +  + + + +L+ L   G   +A 
Sbjct: 525 ESLCEEKKFIEAAELTLFSLQKHHELGVAVCSMVLDGLCTAGRASDAF 572



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 40/261 (15%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK N AR +   +  +  + D   F+ LI  + K+G  +E  ++   M +  +    + Y
Sbjct: 358 GKANKARVLFGQLLDQRSKVDFAAFKTLILGHCKEGDFEEGYQLVLSMLKRDLVPDDECY 417

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF------------FLSLKL 177
            A+     RRGR  +A    ++ML  G+ P+  T++ +L G              + + L
Sbjct: 418 IAVVDGFSRRGRMKIAWEALHRMLDSGLRPSTSTFHSVLLGLLKKDGCAKEAADLIEIML 477

Query: 178 ETAIRFFEDMKSRGI-----------SLDVVT----------YNTMINGYNRFKKMDEAE 216
           E  IR   D+ +  I           +  ++T            T+I      KK  EA 
Sbjct: 478 ERNIRQNLDLSTNMIDSLLKSNLNERAYRIITSLYDHGYYIKMETLIESLCEEKKFIEAA 537

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM-----KSFDVKPNAVTYTA 271
           +L     +K+ E  V   + ++ G     RA DA R+F E+      S  V P+++   A
Sbjct: 538 ELTLFSLQKHHELGVAVCSMVLDGLCTAGRASDAFRLFYELIENRGTSAAVAPSSL--VA 595

Query: 272 LLPGLCDAGKMVEVQKVLREM 292
           L   L + GKM E   + ++M
Sbjct: 596 LYHALKEDGKMKEADFIAKQM 616


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 176/639 (27%), Positives = 297/639 (46%), Gaps = 23/639 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V + L  A+N+  AL +FR +E       +  T   MI+ L +  +L  A      M
Sbjct: 97  YNFVIHALCKARNTAKALDYFRSME----CEKNVITWTIMIDGLCKANRLPEATTYFAKM 152

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            KKG   +E  + VLI  + K   V  +  +   MK+ G+  +V +Y  +     R+ + 
Sbjct: 153 KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKV 212

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A + F +M+  G  P   TYN +L G   +  ++ A    ++M+ RG+  D  +Y+T+
Sbjct: 213 DTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL 272

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           + G  +  K+D A K+F +    +  P V++Y+T+I G     R D+A ++F++M+    
Sbjct: 273 MAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSC 332

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P+ VT+TAL+ GLC   ++ E Q+VL  M +R   P +   +  L+   CK+G +  A 
Sbjct: 333 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP-NVITYSSLIDGLCKTGQVRDAQ 391

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           +V K MI   I      Y  LI  FC     D A+ L++++     +         +  +
Sbjct: 392 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL--------PDIIT 443

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIM 440
           YN +I  LC  G+  +A   F   MK    +P  + ++ LI G  K    D A  +   M
Sbjct: 444 YNTLIDGLCKTGRAPEANRLFGD-MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 502

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            ++ V  D   +  L+E Y   G   DA+  L+ M+    SP    + S+++   + GR+
Sbjct: 503 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 562

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A RV+K M ++G + N+     +++A    G    A   ++ M+ +G  PN   + SL
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRD--CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +      G    A K+L+  L RD  C  D+ +Y  ++D L   G+   A  +L  I + 
Sbjct: 623 IGGFCGTGDLEEARKILER-LERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS 681

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMSR 653
           G          LI GL Q     +A ++L  M     SR
Sbjct: 682 GTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSR 720



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 167/653 (25%), Positives = 296/653 (45%), Gaps = 38/653 (5%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           + + AL+FF W  +   F+H+  T+ ++ E L R  +++    IL +    G+  +   +
Sbjct: 3   DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTY 62

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            V+I+   K G + ++ ++ + M++ G       Y+ +   + +      A  YF  M  
Sbjct: 63  AVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM-- 120

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
              E    T+ +M+ G   + +L  A  +F  MK +G   +  TYN +ING+ +  K+  
Sbjct: 121 -ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 179

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A  L  EMKE  + P V++Y+T+I G+    + D A ++F +M      PN VTY  LL 
Sbjct: 180 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 239

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GLC  G M E  ++L EM ER + P D   +  L+   CK+G ++ A  V +       P
Sbjct: 240 GLCRNGLMDEAYELLDEMRERGLQP-DKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCP 298

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI-------------------ILRPQST 375
            +   Y  LI   CKA   D A KL +K+ E                      +   Q  
Sbjct: 299 PDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 358

Query: 376 LD-ME-------ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHS 425
           L+ ME         +Y+ +I  LC  GQ   A+  F++++ +G+ +P  V +N+LI G  
Sbjct: 359 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI-EPNVVTYNSLIHGFC 417

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
                DSA  +++ M   G   D   Y  LI+   + G   +A      M     +P   
Sbjct: 418 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 477

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            +  ++    +  R+  A  +   M+++ V  ++   + ++E     G V++A   ++ M
Sbjct: 478 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 537

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           + S   P+   + SL+    + G+ + A ++L     R C  ++ +Y  ++DA   AGK 
Sbjct: 538 VASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 597

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMSRG 654
             AY +L +++  G   +  +   LI G    G+ ++A  IL R+ R E  + 
Sbjct: 598 TVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKA 650



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 221/446 (49%), Gaps = 12/446 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + G+L+ A  +   M +   + D   F  L++   K   +QE+ ++ + M+   
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +V +Y +L   + + G+   A+  F +M+  GIEP   TYN ++ GF ++  +++A+
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              E+M + G   D++TYNT+I+G  +  +  EA +LF +MK K   P VI+Y+ +I G+
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 486

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             +ER D A  +FD+M    V P+ VT++ L+ G C+AG + + +++L EMV     P D
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP-D 545

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK G +  A  VLK M +         Y  LI+ FC+A     A +LL+
Sbjct: 546 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLE 605

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK--KGVLDPVAFNN 419
           ++V   +  +P         +Y  +I   C  G   +A     +L +      D  A+  
Sbjct: 606 EMVGNGV--QPNVI------TYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRV 657

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           ++ G  + G   +A E+++ + + G P   D Y+ LI    +  E   A   L+ M    
Sbjct: 658 MMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 717

Query: 480 HS-PASSLFRSVMESLFEDGRVQTAS 504
            S P +  + +V++ L  +GR + A+
Sbjct: 718 KSRPNAEAYEAVIQELAREGRHEEAN 743


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 161/610 (26%), Positives = 289/610 (47%), Gaps = 30/610 (4%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG----VQWDEDM-------------F 94
           F H   +   M+  L R  +L+ A+  +L M +K     V+  E +             +
Sbjct: 131 FKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIY 190

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
           ++L+ +Y +   ++E  + F I+++ GV  S+ + + L   ++R G   +A   + +++ 
Sbjct: 191 DLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVR 250

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            GIE   +T N+M+       K E  + F  DM+ +G+  D+VTYNT+IN Y R   ++E
Sbjct: 251 GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEE 310

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A +L      + +EP +++Y  ++ G   + + D A  +  EM    + PNA TY  LL 
Sbjct: 311 AFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLV 370

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
            +C    ++E Q++  EM  R + P D   F  L+GV  ++GHL  A    + M R  I 
Sbjct: 371 EICRRDNILEAQEIFDEMSRRGVLP-DLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   Y ILI+ FC+      A+K+ D+++ +           M+  +YN  +  LC   
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCF--------MDVVTYNTFLNGLCKKK 481

Query: 395 QTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
               A++ F +++++G V D   F  LIRG+ K+GN D A  + + M R  +  D   Y 
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYN 541

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI+ + + GE   AK   D MI     P    + +V+      G +  A  +   M+EK
Sbjct: 542 TLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK 601

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G++ NL     +++     G + +A   +  M+ +G +P+   +++L+    ++     A
Sbjct: 602 GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             L++    R    ++ +Y  +L+   A GK   A  +L K++E G   D  +   LI G
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721

Query: 631 LNQEGNTKQA 640
              + N K+A
Sbjct: 722 HVSQDNMKEA 731



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 246/493 (49%), Gaps = 10/493 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+  L +  K  +    L DM  KGV  D   +  LI +Y ++G+V+E+ ++ +     G
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +E  + +Y+A+   + + G+Y  AK    +ML  G+ P   TYN +L        +  A 
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F++M  RG+  D+V+++++I    R   + +A   F EM+   I P  + YT +I G+
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                  DAL++ DEM +     + VTY   L GLC      +   +  EMVER + P D
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP-D 501

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  L+   CK G+++ A ++ +AM+R ++  +   Y  LI+ FCKA    RA +L D
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            ++ K+II  P         SY  ++   C +G   +A     Q+++KG+  + V  N L
Sbjct: 562 DMIRKDII--PDHI------SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I+G+ + G+   A+E +  M   G+  D+ +Y  LI+ YL++     A   ++ M + G 
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
                 +  ++     +G++Q A +V++ M+E G+  +    + ++   + + +++EA  
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFR 733

Query: 541 RIDLMMQSGSVPN 553
             D M+Q G VP+
Sbjct: 734 FHDEMLQRGLVPD 746



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 191/416 (45%), Gaps = 47/416 (11%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N   A + F  + R G+   D  +   +I +L R G L  A     +M + G+  D  ++
Sbjct: 377 NILEAQEIFDEMSRRGVL-PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            +LI+ + + G + +++K+ D M   G    V +Y+     + ++  +  A   FN+M+ 
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G+ P  +T+  ++ G+     ++ A+  FE M    +  D VTYNT+I+G+ +  +M  
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A++L+ +M  K+I P  ISY T++ G+ +     +AL + D+M    ++PN VT   L+ 
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G C +G M +  + L +M+   I P   S                               
Sbjct: 616 GYCRSGDMPKAYEYLSKMISNGIIPDSFS------------------------------- 644

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                Y  LI+ + K    ++A  L++++ ++         L     +YN ++   C  G
Sbjct: 645 -----YNTLIDGYLKEANLEKAFILINEMEKR--------GLQFNIITYNLILNGFCAEG 691

Query: 395 QTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRD 448
           +  +AE   R++++ G+  D   +++LI GH  + N   AF     M +RG VP D
Sbjct: 692 KMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 161/610 (26%), Positives = 289/610 (47%), Gaps = 30/610 (4%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG----VQWDEDM-------------F 94
           F H   +   M+  L R  +L+ A+  +L M +K     V+  E +             +
Sbjct: 131 FKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIY 190

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
           ++L+ +Y +   ++E  + F I+++ GV  S+ + + L   ++R G   +A   + +++ 
Sbjct: 191 DLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVR 250

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            GIE   +T N+M+       K E  + F  DM+ +G+  D+VTYNT+IN Y R   ++E
Sbjct: 251 GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEE 310

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A +L      + +EP +++Y  ++ G   + + D A  +  EM    + PNA TY  LL 
Sbjct: 311 AFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLV 370

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
            +C    ++E Q++  EM  R + P D   F  L+GV  ++GHL  A    + M R  I 
Sbjct: 371 EICRRDNILEAQEIFDEMSRRGVLP-DLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   Y ILI+ FC+      A+K+ D+++ +           M+  +YN  +  LC   
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCF--------MDVVTYNTFLNGLCKKK 481

Query: 395 QTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
               A++ F +++++G V D   F  LIRG+ K+GN D A  + + M R  +  D   Y 
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYN 541

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI+ + + GE   AK   D MI     P    + +V+      G +  A  +   M+EK
Sbjct: 542 TLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK 601

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G++ NL     +++     G + +A   +  M+ +G +P+   +++L+    ++     A
Sbjct: 602 GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             L++    R    ++ +Y  +L+   A GK   A  +L K++E G   D  +   LI G
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721

Query: 631 LNQEGNTKQA 640
              + N K+A
Sbjct: 722 HVSQDNMKEA 731



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 246/493 (49%), Gaps = 10/493 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+  L +  K  +    L DM  KGV  D   +  LI +Y ++G+V+E+ ++ +     G
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +E  + +Y+A+   + + G+Y  AK    +ML  G+ P   TYN +L        +  A 
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F++M  RG+  D+V+++++I    R   + +A   F EM+   I P  + YT +I G+
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                  DAL++ DEM +     + VTY   L GLC      +   +  EMVER + P D
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP-D 501

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  L+   CK G+++ A ++ +AM+R ++  +   Y  LI+ FCKA    RA +L D
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            ++ K+II  P         SY  ++   C +G   +A     Q+++KG+  + V  N L
Sbjct: 562 DMIRKDII--PDHI------SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I+G+ + G+   A+E +  M   G+  D+ +Y  LI+ YL++     A   ++ M + G 
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
                 +  ++     +G++Q A +V++ M+E G+  +    + ++   + + +++EA  
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFR 733

Query: 541 RIDLMMQSGSVPN 553
             D M+Q G VP+
Sbjct: 734 FHDEMLQRGLVPD 746



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 191/416 (45%), Gaps = 47/416 (11%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N   A + F  + R G+   D  +   +I +L R G L  A     +M + G+  D  ++
Sbjct: 377 NILEAQEIFDEMSRRGVL-PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            +LI+ + + G + +++K+ D M   G    V +Y+     + ++  +  A   FN+M+ 
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G+ P  +T+  ++ G+     ++ A+  FE M    +  D VTYNT+I+G+ +  +M  
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A++L+ +M  K+I P  ISY T++ G+ +     +AL + D+M    ++PN VT   L+ 
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G C +G M +  + L +M+   I P   S                               
Sbjct: 616 GYCRSGDMPKAYEYLSKMISNGIIPDSFS------------------------------- 644

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                Y  LI+ + K    ++A  L++++ ++         L     +YN ++   C  G
Sbjct: 645 -----YNTLIDGYLKEANLEKAFILINEMEKR--------GLQFNIITYNLILNGFCAEG 691

Query: 395 QTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRD 448
           +  +AE   R++++ G+  D   +++LI GH  + N   AF     M +RG VP D
Sbjct: 692 KMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747


>gi|242060260|ref|XP_002451419.1| hypothetical protein SORBIDRAFT_04g001815 [Sorghum bicolor]
 gi|241931250|gb|EES04395.1| hypothetical protein SORBIDRAFT_04g001815 [Sorghum bicolor]
          Length = 613

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 265/519 (51%), Gaps = 20/519 (3%)

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM----KSRGISLDVVTYNTMINGYNRF 209
           S    P   T N ++ G   +    +A   F+      ++   + DV+TYN+M++   R 
Sbjct: 100 SPDASPDVATLNTLIHGLSTASPRPSAPTLFKLFLFLPETYAFAPDVITYNSMLSALCRA 159

Query: 210 KKMDEAEKLFAEMK------EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
             +  A KLF  M+      + +  P V++YTTMI+   A   AD+AL +F  M +  V 
Sbjct: 160 GDLATAHKLFDGMRVSGQGGKADAFPNVVTYTTMIRACCAKRLADEALSLFKMMVADGVP 219

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           PN +TY  ++ G C+AG+M  V++V    ++ + P  D   F  L+   C+ G +  A  
Sbjct: 220 PNRITYNTMVQGFCEAGRMELVKEVFG--MDSFKP--DTCTFNTLMAAHCREGRIEDAMK 275

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V   M+ L +  ++  Y ++I   C+   + R  + +D L+EKE++ +    + + A+ Y
Sbjct: 276 VFDQMMELRVRRDSASYSMVIRALCENGEFGRVEEFVDDLLEKEVLKKKGGCVPLIAA-Y 334

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           +P++++ C NG+  KA + F QL+ ++  +D +AF  LI GH KEG+ +  +++V  M +
Sbjct: 335 SPVLKYFCENGKAKKARVLFGQLLDRRSKVDFLAFKTLILGHCKEGDFEEGYQLVLSMLK 394

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF-EDGRVQ 501
           R +  D + YI +I+ +++KG    A  AL  M+  G  P++S F SV+  L  +DG  +
Sbjct: 395 RDLRPDTECYIAVIDGFMQKGRMKSAWEALHRMLNSGLQPSTSTFHSVLLGLLKKDGCAK 454

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
            A  +++ M+E+ +++N+DL   ++  L      + A      +  +G     + +++ L
Sbjct: 455 EAGDLIEIMLERKIRQNVDLSTNLIGVLFKSDLNDRAYKITKRLYDNGYYIKMEKVIATL 514

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
            +  K I A +   F L +   + +  +  VLD L + G+T  A+ + +++ME    +  
Sbjct: 515 CQDKKFIDAAEFTLFSLQKRHELGVEVHSLVLDGLCSDGRTSEAFQLFYELMENRSTSAV 574

Query: 622 KSSDKLI---AGLNQEGNTKQADILSRMIRGEMSRGSQK 657
            +   L+     L + G  K+AD +++ +R   +R  Q+
Sbjct: 575 AAPRSLVLLHHALEEAGKVKEADFVAKQMRRATARIRQR 613



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/396 (22%), Positives = 178/396 (44%), Gaps = 38/396 (9%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL-LDMPKKGVQWDEDMF 94
           ++ AL  F+ +   G+   +R T+  M++     G++   + +  +D      + D   F
Sbjct: 203 ADEALSLFKMMVADGV-PPNRITYNTMVQGFCEAGRMELVKEVFGMD----SFKPDTCTF 257

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             L+ ++ ++G +++++K+FD M +L V R   SY  + + +   G +   + + + +L 
Sbjct: 258 NTLMAAHCREGRIEDAMKVFDQMMELRVRRDSASYSMVIRALCENGEFGRVEEFVDDLLE 317

Query: 155 E-------GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           +       G  P    Y+ +L  F  + K + A   F  +  R   +D + + T+I G+ 
Sbjct: 318 KEVLKKKGGCVPLIAAYSPVLKYFCENGKAKKARVLFGQLLDRRSKVDFLAFKTLILGHC 377

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           +    +E  +L   M ++++ P    Y  +I G++   R   A      M +  ++P+  
Sbjct: 378 KEGDFEEGYQLVLSMLKRDLRPDTECYIAVIDGFMQKGRMKSAWEALHRMLNSGLQPSTS 437

Query: 268 TYTALLPGL-----C--DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           T+ ++L GL     C  +AG ++E+      M+ER I  ++  +   L+GV  KS   + 
Sbjct: 438 TFHSVLLGLLKKDGCAKEAGDLIEI------MLERKI-RQNVDLSTNLIGVLFKSDLNDR 490

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  + K +       + G+Y I +E        D+  K +D        L+ +  L +E 
Sbjct: 491 AYKITKRLY------DNGYY-IKMEKVIATLCQDK--KFIDAAEFTLFSLQKRHELGVEV 541

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA 416
            S   ++  LC +G+T +A   F +LM+      VA
Sbjct: 542 HSL--VLDGLCSDGRTSEAFQLFYELMENRSTSAVA 575



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 115/267 (43%), Gaps = 17/267 (6%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLG------VERSVKSYDALFKLILRRGRYMMAKR 147
           +  ++ +  + G +  + K+FD M+  G         +V +Y  + +    +     A  
Sbjct: 149 YNSMLSALCRAGDLATAHKLFDGMRVSGQGGKADAFPNVVTYTTMIRACCAKRLADEALS 208

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
            F  M+++G+ P R TYN M+ GF  + ++E     F  M S     D  T+NT++  + 
Sbjct: 209 LFKMMVADGVPPNRITYNTMVQGFCEAGRMELVKEVF-GMDS--FKPDTCTFNTLMAAHC 265

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV-------AVERADDALRIFDEMKSF 260
           R  ++++A K+F +M E  +     SY+ +I+            E  DD L      K  
Sbjct: 266 REGRIEDAMKVFDQMMELRVRRDSASYSMVIRALCENGEFGRVEEFVDDLLEKEVLKKKG 325

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P    Y+ +L   C+ GK  + + +  ++++R     D   F  L+   CK G    
Sbjct: 326 GCVPLIAAYSPVLKYFCENGKAKKARVLFGQLLDRR-SKVDFLAFKTLILGHCKEGDFEE 384

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENF 347
              ++ +M++  +  +   Y  +I+ F
Sbjct: 385 GYQLVLSMLKRDLRPDTECYIAVIDGF 411



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 46/264 (17%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK   AR +   +  +  + D   F+ LI  + K+G  +E  ++   M +  +    + Y
Sbjct: 345 GKAKKARVLFGQLLDRRSKVDFLAFKTLILGHCKEGDFEEGYQLVLSMLKRDLRPDTECY 404

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF------------FLSLKL 177
            A+    +++GR   A    ++ML+ G++P+  T++ +L G              + + L
Sbjct: 405 IAVIDGFMQKGRMKSAWEALHRMLNSGLQPSTSTFHSVLLGLLKKDGCAKEAGDLIEIML 464

Query: 178 ETAIR-------------FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA------EKL 218
           E  IR             F  D+  R   +    Y+   NGY  + KM++       +K 
Sbjct: 465 ERKIRQNVDLSTNLIGVLFKSDLNDRAYKITKRLYD---NGY--YIKMEKVIATLCQDKK 519

Query: 219 FAEMKE-------KNIEPTVISYTTMIKGYVAVERADDALRIFDEM---KSFDVKPNAVT 268
           F +  E       K  E  V  ++ ++ G  +  R  +A ++F E+   +S        +
Sbjct: 520 FIDAAEFTLFSLQKRHELGVEVHSLVLDGLCSDGRTSEAFQLFYELMENRSTSAVAAPRS 579

Query: 269 YTALLPGLCDAGKMVEVQKVLREM 292
              L   L +AGK+ E   V ++M
Sbjct: 580 LVLLHHALEEAGKVKEADFVAKQM 603


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 165/600 (27%), Positives = 279/600 (46%), Gaps = 19/600 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI+ L +  +L  A      M KKG   +E  + VLI  + K   V  +  +   MK+ G
Sbjct: 13  MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V +Y  +     R+ +   A + F +M+  G  P   TYN +L G   +  ++ A 
Sbjct: 73  LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              ++M+ RG+  D  +Y+T++ G  +  K+D A K+F +    +  P V++Y+T+I G 
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R D+A ++F++M+    +P+ VT+TAL+ GLC   ++ E Q+VL  M +R   P +
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP-N 251

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK+G +  A +V K MI   I      Y  LI  FC     D A+ L++
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
           ++     +         +  +YN +I  LC  G+  +A   F   MK    +P  + ++ 
Sbjct: 312 EMTATGCL--------PDIITYNTLIDGLCKTGRAPEANRLFGD-MKAKFCNPDVITYSC 362

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  K    D A  +   M ++ V  D   +  L+E Y   G   DA+  L+ M+   
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            SP    + S+++   + GR+  A RV+K M ++G + N+     +++A    G    A 
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 482

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD--CIIDLASYEKVLD 594
             ++ M+ +G  PN   + SL+      G    A K+L+  L RD  C  D+ +Y  ++D
Sbjct: 483 KLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLER-LERDENCKADMFAYRVMMD 541

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMSR 653
            L   G+   A  +L  I + G          LI GL Q     +A ++L  M     SR
Sbjct: 542 GLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSR 601



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 255/535 (47%), Gaps = 16/535 (2%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E++V ++  +   + +  R   A  YF KM  +G  P   TYNV++ GF    K+  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              ++MK  G++ +VVTY+T+I+G+ R  K+D A KLF +M E    P +++Y T++ G 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 D+A  + DEM+   ++P+  +Y  L+ GLC  GK+    KV  +      PP D
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP-D 181

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK+G L+ A  + + M   S   +   +  L++  CK +    A ++L+
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
            + ++     P         +Y+ +I  LC  GQ   A+  F++++ +G+ +P  V +N+
Sbjct: 242 TMEDRNCT--PN------VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI-EPNVVTYNS 292

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G       DSA  +++ M   G   D   Y  LI+   + G   +A      M    
Sbjct: 293 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            +P    +  ++    +  R+  A  +   M+++ V  ++   + ++E     G V++A 
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             ++ M+ S   P+   + SL+    + G+ + A ++L     R C  ++ +Y  ++DA 
Sbjct: 413 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 472

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGE 650
             AGK   AY +L +++  G   +  +   LI G    G+ ++A  +L R+ R E
Sbjct: 473 CRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDE 527



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 238/494 (48%), Gaps = 14/494 (2%)

Query: 15  RALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L P +F ++ +   L      + AL+ F      G    D   +  +I  L + G+L+
Sbjct: 141 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFED-NSNGDCPPDVVAYSTLIAGLCKTGRLD 199

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +   M +   + D   F  L++   K   +QE+ ++ + M+      +V +Y +L 
Sbjct: 200 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 259

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G+   A+  F +M+  GIEP   TYN ++ GF ++  +++A+   E+M + G  
Sbjct: 260 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 319

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            D++TYNT+I+G  +  +  EA +LF +MK K   P VI+Y+ +I G+  +ER D A  +
Sbjct: 320 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 379

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           FD+M    V P+ VT++ L+ G C+AG + + +++L EMV     P D   +  L+   C
Sbjct: 380 FDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP-DVYTYTSLVDGFC 438

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G +  A  VLK M +         Y  LI+ FC+A     A KLL+++V   +  +P 
Sbjct: 439 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGV--QPN 496

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK--KGVLDPVAFNNLIRGHSKEGNPD 431
                   +Y  +I   C  G   +A     +L +      D  A+  ++ G  + G   
Sbjct: 497 ------VITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMS 550

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS-PASSLFRSV 490
           +A E+++ + + G P   D Y+ LI    +  E   A   L+ M     S P +  + +V
Sbjct: 551 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 610

Query: 491 MESLFEDGRVQTAS 504
           ++ L  +GR + A+
Sbjct: 611 IQELAREGRHEEAN 624



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 165/376 (43%), Gaps = 13/376 (3%)

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
            + + N +T+T ++ GLC A ++ E      +M ++   P + + +  L+   CK   ++
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWT-YNVLINGFCKVHKVH 59

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  +LK M    +      Y  +I  FC+    D A KL  ++VE   +  P       
Sbjct: 60  RAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCM--PNLV---- 113

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +YN ++  LC NG   +A     ++ ++G+  D  +++ L+ G  K G  D A ++ +
Sbjct: 114 --TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE 171

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
                  P D  AY  LI    + G   +A    + M E+   P    F ++M+ L +  
Sbjct: 172 DNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGD 231

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           R+Q A +V+++M ++    N+   + +++ L   G V +A      M+  G  PN   ++
Sbjct: 232 RLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYN 291

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           SL+          +A+ L++      C+ D+ +Y  ++D L   G+   A  +   +  K
Sbjct: 292 SLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 351

Query: 616 GGVTDWKSSDKLIAGL 631
               D  +   LI G 
Sbjct: 352 FCNPDVITYSCLIGGF 367


>gi|115443885|ref|NP_001045722.1| Os02g0121900 [Oryza sativa Japonica Group]
 gi|41052752|dbj|BAD07608.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535253|dbj|BAF07636.1| Os02g0121900 [Oryza sativa Japonica Group]
 gi|125580614|gb|EAZ21545.1| hypothetical protein OsJ_05173 [Oryza sativa Japonica Group]
 gi|218189948|gb|EEC72375.1| hypothetical protein OsI_05641 [Oryza sativa Indica Group]
          Length = 624

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 262/518 (50%), Gaps = 25/518 (4%)

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETA------IRFFEDMKSRGISLDVVTYNTMINGYN 207
           S    P   T N +L G   +    +        RF  D  +   + D ++YN++++   
Sbjct: 109 SPSASPDAATLNTLLHGLSTASPHPSTPALLRLFRFLPD--TYAFAPDAISYNSLLSALC 166

Query: 208 RFKKMDEAEKLFAEMKEKNIE------PTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           R   +  A KLF  M+    E      P VI+YTTMIK Y A    ++AL IF  M +  
Sbjct: 167 RAGDVLTARKLFDGMRVGGEEGRGAVFPNVITYTTMIKAYCAKRLVNEALAIFKLMVADG 226

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V PN +TY  ++ G CDAG+M  V++VL   ++ + P  D   F  L+ V C+ G +  A
Sbjct: 227 VAPNRITYNTMVQGFCDAGRMELVKEVLE--MDSFRP--DTCTFNTLVAVHCREGRIEDA 282

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             V   M+ L +  ++  Y ++I   C+   + +A +L+D+L+EKE++ +      + A 
Sbjct: 283 MKVFNQMVELRVRRDSASYSMVIRVLCENGEFGQAEELVDELLEKEVLKKRGGCTPLIA- 341

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YNP+  +LC +G+T KA + F QL+ ++  +D  AF  LI GH +EG+ +  + ++  M
Sbjct: 342 AYNPVFVYLCEHGKTKKARMLFGQLLDRRSKVDVPAFKTLILGHCREGDFEEGYALLLSM 401

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF-EDGR 499
            +R +  D + YI +IE + ++G    A  AL  M+  G  P++S F SV+  L  +DG 
Sbjct: 402 LKRDLVPDDECYIAVIEGFSQRGRMKFAWEALHRMLNSGLRPSTSTFHSVLLGLLNKDGC 461

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
            + A+ +++ M+E+ +++N+DL   +++ L      + A   +  +   G     + L++
Sbjct: 462 AKEAADLIEIMLERKIRQNVDLSTNLVDTLFRNNLNDRAYKIVTSLYDHGYYIKMEKLIA 521

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME-KGGV 618
            L E+ K I A     F L +     +A    VLD L   G+   A+ + ++++E +  +
Sbjct: 522 NLCEEKKFIEAADFTLFSLEKSQNFGVAIPSMVLDGLCMTGRASEAFRLFYELIENRSAL 581

Query: 619 TDWKSSDKLIA---GLNQEGNTKQADILSRMIRGEMSR 653
               +   L+A    L + G  K+AD ++R +R   +R
Sbjct: 582 ASVAAPRSLVALHHALEESGKMKEADFIARQMRRASAR 619



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 93/464 (20%), Positives = 185/464 (39%), Gaps = 63/464 (13%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE------RSVKSYDALFKLILRRGRYM 143
           D   +  L+ +  + G V  + K+FD M+  G E       +V +Y  + K    +    
Sbjct: 154 DAISYNSLLSALCRAGDVLTARKLFDGMRVGGEEGRGAVFPNVITYTTMIKAYCAKRLVN 213

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F  M+++G+ P R TYN M+ GF  + ++E      E    R    D  T+NT++
Sbjct: 214 EALAIFKLMVADGVAPNRITYNTMVQGFCDAGRMELVKEVLEMDSFRP---DTCTFNTLV 270

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM------ 257
             + R  ++++A K+F +M E  +     SY+ +I+          A  + DE+      
Sbjct: 271 AVHCREGRIEDAMKVFNQMVELRVRRDSASYSMVIRVLCENGEFGQAEELVDELLEKEVL 330

Query: 258 -KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
            K     P    Y  +   LC+ GK  + + +  ++++R     D   F  L+   C+ G
Sbjct: 331 KKRGGCTPLIAAYNPVFVYLCEHGKTKKARMLFGQLLDRR-SKVDVPAFKTLILGHCREG 389

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
                  +L +M++  +  +   Y  +IE F +      A + L +++     LRP ++ 
Sbjct: 390 DFEEGYALLLSMLKRDLVPDDECYIAVIEGFSQRGRMKFAWEALHRMLNSG--LRPSTS- 446

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRG-HSKEGNPDSAFE 435
                                                   F++++ G  +K+G    A +
Sbjct: 447 ---------------------------------------TFHSVLLGLLNKDGCAKEAAD 467

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +++IM  R + ++ D    L+++  R      A   + S+ + G+         ++ +L 
Sbjct: 468 LIEIMLERKIRQNVDLSTNLVDTLFRNNLNDRAYKIVTSLYDHGYYIK---MEKLIANLC 524

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           E+ +   A+      +EK     + + + +L+ L M G   EA 
Sbjct: 525 EEKKFIEAADFTLFSLEKSQNFGVAIPSMVLDGLCMTGRASEAF 568



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 14/231 (6%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK   AR +   +  +  + D   F+ LI  + ++G  +E   +   M +  +    + Y
Sbjct: 354 GKTKKARMLFGQLLDRRSKVDVPAFKTLILGHCREGDFEEGYALLLSMLKRDLVPDDECY 413

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL-ETAIRFFEDMK 188
            A+ +   +RGR   A    ++ML+ G+ P+  T++ +L G        + A    E M 
Sbjct: 414 IAVIEGFSQRGRMKFAWEALHRMLNSGLRPSTSTFHSVLLGLLNKDGCAKEAADLIEIML 473

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA----V 244
            R I  +V     +++   R    D A K+   + +       I    +I         +
Sbjct: 474 ERKIRQNVDLSTNLVDTLFRNNLNDRAYKIVTSLYDHGY---YIKMEKLIANLCEEKKFI 530

Query: 245 ERADDALRIFDEMKSFDVK-PNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           E AD  L   ++ ++F V  P+ V     L GLC  G+  E  ++  E++E
Sbjct: 531 EAADFTLFSLEKSQNFGVAIPSMV-----LDGLCMTGRASEAFRLFYELIE 576


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 165/612 (26%), Positives = 288/612 (47%), Gaps = 19/612 (3%)

Query: 45  WVERAGLFNH----DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
           W    G+  H    D  T+  MI    +VG +  A+ +LL+M +KG   +   + V+I  
Sbjct: 200 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGG 259

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
             +  ++ E++++   M   G+   + +YD L        R   AK    +M+  G++P 
Sbjct: 260 LCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 319

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
             TYN ++ GF     +E A R  ++M + GI  +++ +NT++NG  +  KM++A ++  
Sbjct: 320 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 379

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           EM EK +EP   +Y+ +I+G+   +    A  + DEMK   + P  +TY+ ++ GLC  G
Sbjct: 380 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 439

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            +     +LREMV   + P +  V+  L+    K G +  +  +L+ M    I  +   Y
Sbjct: 440 NLQGTNAILREMVMNGLKP-NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCY 498

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             LI  FCKA+  + A   L +++E+   LRP       A +Y   I      G+   A+
Sbjct: 499 NSLIIGFCKAKRMEEARTYLMEMLERR--LRPN------AHTYGAFIDGYSKAGEMEIAD 550

Query: 401 IFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
            +F +++  GVL  V  +  LI GH KEGN   AF + + +  R V +D   Y  LI   
Sbjct: 551 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 610

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            R G+  +A      + E G  P +  + S++    + G V  AS++++ M  KG+  ++
Sbjct: 611 SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDI 670

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                +++ L   G +E A    D +   G  PN   + +++    +     AA +LL+ 
Sbjct: 671 VTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 730

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
            L R    D   Y  +L+      K   A  +  +++EK G     S + LI G  + G 
Sbjct: 731 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK-GFASTVSFNTLIEGYCKSGK 789

Query: 637 TKQAD-ILSRMI 647
            ++A+ +L  MI
Sbjct: 790 LQEANHLLEEMI 801



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 276/589 (46%), Gaps = 12/589 (2%)

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            T+  +I  L R G L     IL +M   G++ +  ++  L+ ++ K+G V+ES  I + M
Sbjct: 427  TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 486

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            ++ G+   V  Y++L     +  R   A+ Y  +ML   + P  HTY   + G+  + ++
Sbjct: 487  REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546

Query: 178  ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            E A R+F +M S G+  +V  Y  +I G+ +   + EA  +F  +  + +   V +Y+ +
Sbjct: 547  EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 606

Query: 238  IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
            I G     +  +A  IF E++   + PNA TY +L+ G C  G + +  ++L EM  + I
Sbjct: 607  IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 666

Query: 298  PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
             P D   +  L+   CK+G +  A ++   +    +      Y  +++ +CK++    A 
Sbjct: 667  NP-DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 725

Query: 358  KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
            +LL+     E++LR    +  +A  YN ++   C   +  KA   F+++++KG    V+F
Sbjct: 726  QLLE-----EMLLR---GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSF 777

Query: 418  NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
            N LI G+ K G    A  +++ M  +    +   Y  LI+   + G   +AK     M E
Sbjct: 778  NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE 837

Query: 478  DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
                P +  + S++      G +   S + + MV KG++ +      +++A    G+V E
Sbjct: 838  RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 897

Query: 538  ALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
            A    D ++  G   SV  +D+L+  L +K +    +KLL+        + L +   +  
Sbjct: 898  ACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIAR 957

Query: 595  ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
                AG    A  +L  +++ G V++  S   L+ G     N++ +D L
Sbjct: 958  GFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNL 1006



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 259/552 (46%), Gaps = 42/552 (7%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++L++SY K G + E+V +F   K      S+ S ++L   +L+  +  +  + F+ M
Sbjct: 147 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGM 206

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            +  + P  +TY  M+        ++ A R   +M  +G S ++VTYN +I G  R + +
Sbjct: 207 CAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLL 266

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           DEA +L   M +K + P + +Y  +I G+   +R+ +A  +  EM    +KP  +TY AL
Sbjct: 267 DEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNAL 326

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G    G + +  ++  EMV   I   +  ++  LL   CK+G +  A ++++ M+   
Sbjct: 327 IDGFMRQGDIEQAFRIKDEMVACGI-EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  ++  Y +LIE  C+ +   RA +LLD++ +++  L P         +Y+ +I  LC 
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK--LAPT------VLTYSVIINGLCR 437

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G         R+++  G+  + V +  L+  H+KEG  + +  I++ M  +G+  D   
Sbjct: 438 CGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 497

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI  + +     +A+T L  M+E    P +  + + ++   + G ++ A R    M+
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 557

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAV 571
             GV  N+ +   ++E     GH +E                           G    A 
Sbjct: 558 SCGVLPNVGIYTALIE-----GHCKE---------------------------GNVTEAF 585

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            +  F L R  + D+ +Y  ++  L   GK   A+ I  ++ EKG + +  + + LI+G 
Sbjct: 586 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645

Query: 632 NQEGNTKQADIL 643
            ++GN  +A  L
Sbjct: 646 CKQGNVDKASQL 657



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 212/459 (46%), Gaps = 13/459 (2%)

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
           S + V ++ +++ Y +   + EA  +F   K     P+++S  +++   +   + +   +
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 201

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +FD M +  V P+  TYT ++   C  G + + ++VL EM E+   P +   +  ++G  
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSP-NLVTYNVIIGGL 260

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           C++  L+ A ++ ++M+   +  +   Y ILI  FC  +    A  +L +++  ++ L+P
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMI--DVGLKP 318

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
                 E  +YN +I      G   +A     +++  G+  + + +N L+ G  K G  +
Sbjct: 319 ------EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKME 372

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A EI++ M  +GV  D+  Y  LIE + R    A A   LD M +   +P    +  ++
Sbjct: 373 KALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVII 432

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
             L   G +Q  + +++ MV  G+K N  +   ++ A    G VEE+   ++ M + G +
Sbjct: 433 NGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 492

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P+   ++SL+    +  +   A   L   L R    +  +Y   +D    AG+   A   
Sbjct: 493 PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRY 552

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
             +++  G + +      LI G  +EGN  +A  + R I
Sbjct: 553 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 170/356 (47%), Gaps = 12/356 (3%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + L+P  F +N + +      N + A Q    +   G+ N D  T+  +I+ L + G++ 
Sbjct: 629 KGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI-NPDIVTYNILIDGLCKAGEIE 687

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A+ +  D+  +G+  +   +  +++ Y K      + ++ + M   GV      Y+ + 
Sbjct: 688 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 747

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
               +  ++  A   F +ML +G   T  ++N ++ G+  S KL+ A    E+M  +   
Sbjct: 748 NFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 806

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            + VTY ++I+   +   M EA++L+ EM+E+N+ PT  +YT+++ GY  +    +   +
Sbjct: 807 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 866

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F+EM +  ++P+ +TY  ++   C  G ++E  K+  E++ + + P   + +  L+   C
Sbjct: 867 FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM-PMSVAAYDALIQALC 925

Query: 314 KSGHLNAAADVLKAM----IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
           K         +L  +     RL +PT +    ++   F  A   D A ++L  +V+
Sbjct: 926 KKEEFFEVLKLLNEIGESGFRLGLPTCS----VIARGFQIAGNMDEAAEVLRSMVK 977



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 124/280 (44%), Gaps = 3/280 (1%)

Query: 14   IRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
            +R + P  F +N++ N     +  E AL  F+ +   G       +   +IE   + GKL
Sbjct: 733  LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF--ASTVSFNTLIEGYCKSGKL 790

Query: 73   NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
              A  +L +M +K    +   +  LI+   K G++ E+ +++  M++  V  + K+Y +L
Sbjct: 791  QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSL 850

Query: 133  FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
                   G        F +M+++GIEP + TY VM+  +     +  A +  +++  +G+
Sbjct: 851  LHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM 910

Query: 193  SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             + V  Y+ +I    + ++  E  KL  E+ E      + + + + +G+      D+A  
Sbjct: 911  PMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAE 970

Query: 253  IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
            +   M  F    N  +   L+ G  +     +   +L++M
Sbjct: 971  VLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 168/621 (27%), Positives = 272/621 (43%), Gaps = 47/621 (7%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L  A   E A   F  + +A  +  D  ++  +I  LGR GK   A  ++ +M
Sbjct: 12  YNSLLNALAKAGQCEEAQLLFEEL-KAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG + +   +  L++  GK G   E++++   M+  G    V++Y+ L   + + GR 
Sbjct: 71  QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   F +M   G  P   TYN +++G     + + A+   E+M+  G   DV+TY+++
Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSL 190

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G  +  +  +A KLF EMK +  +P  I++T ++       R DDAL + DEMK   V
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           KP  VTY AL+ G    G +VE   +L EM      P D   +  L+    K+  L+ A 
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP-DVVTYSCLITGLIKASQLDEAC 309

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            VLK M +   P +   Y  LI    KA + + A +L D+               M++  
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR---------------MKSKG 354

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
            NP                           D V ++ LI    K    +SA  + + M  
Sbjct: 355 CNP---------------------------DVVTYSTLITALGKAARVESACVLFEEMES 387

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G+  D   Y  +I    + G+  DA      M   G SP    + + + SL   GR + 
Sbjct: 388 VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKE 447

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A ++ + M E G+  ++     +L  L     V++A G +  +++ G   +   FD  L 
Sbjct: 448 ARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLE 507

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           +L+  G    A +LL F   +      +SY  ++DAL  AG+   A++ L  + E+GG  
Sbjct: 508 ILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKP 567

Query: 620 DWKSSDKLIAGLNQEGNTKQA 640
           D  S   LI+ L Q G    A
Sbjct: 568 DIVSYSSLISALGQTGQIDTA 588



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 240/520 (46%), Gaps = 13/520 (2%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           +V +Y++L   + + G+   A+  F ++ +    P   +Y+ ++     + K E A+   
Sbjct: 8   NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M+++G   ++ TYNT+++   +  + DEA +L AEM++    P V +Y  +I      
Sbjct: 68  AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            R  +A  +F EM+     P+  TY +L+ GL   G+  +  ++L EM ER+  P D   
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM-ERHGCPPDVMT 186

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+    K G    A  + + M R     ++  +  L++   KA   D A++LLD++ 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRG 423
           E+ +  +P         +YN +I      G   +A     ++ + G   D V ++ LI G
Sbjct: 247 ERGV--KPGVV------TYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITG 298

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K    D A +++K M + G P D   Y  LI    + G   DA    D M   G +P 
Sbjct: 299 LIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + +++ +L +  RV++A  + + M   G++ +L     I+  L   G V++A     
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFS 418

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M   G  P+   +++ L+ L   G+   A K+ +       + D+A+Y+ +L  L    
Sbjct: 419 EMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTK 478

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +  +A  +L +++E+G   D    D+ +  L   GN  +A
Sbjct: 479 EVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEA 518



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 229/501 (45%), Gaps = 18/501 (3%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TYN +L     + + E A   FE++K+   + DVV+Y+ +IN   R  K + A ++
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
            AEM+ K  +P + +Y T++       + D+ALR+  EM+     P+  TY  L+  L  
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           AG++ E   +  EM ER   P D   +  L+    K G    A ++L+ M R   P +  
Sbjct: 127 AGRLSEAFTLFAEMRERGCVP-DTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI    K     +A KL  ++  K    +P S       ++  ++  L   G+   
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEM--KRRGRKPDSI------TFTALMDALGKAGRVDD 237

Query: 399 AEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           A     ++ ++GV  P  V +N LI G  K G+   A+ ++  M R G   D   Y CLI
Sbjct: 238 ALELLDEMKERGV-KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLI 296

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
              ++  +  +A   L  M ++G  P +  + +++  L + G +  A R+   M  KG  
Sbjct: 297 TGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCN 356

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            ++   + ++ AL     VE A    + M   G  P+   + S+++VL + G+   A +L
Sbjct: 357 PDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRL 416

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                G+    D+ +Y   L++L   G+   A  I   + E G + D  + D L+ GL++
Sbjct: 417 FSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSK 476

Query: 634 EGNTKQADILSRMIRGEMSRG 654
              TK+ D    +++  + +G
Sbjct: 477 ---TKEVDDACGLLKELIEQG 494


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 254/516 (49%), Gaps = 12/516 (2%)

Query: 3   ERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKM 62
           E  W     N + ++    + + V  VL+   ++++AL+FF+W ++   ++H+ + +  M
Sbjct: 163 EDQWECLQDNFLNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTM 222

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           I+ILGR       + +L  M  +G +    M    + SYG+ G  +ES++ F++MK++G 
Sbjct: 223 IDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGY 282

Query: 123 ERSV--KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           E  +   +Y+++   +++  +  MA+  F +M++ G+     TY  M+  FFL  K+E A
Sbjct: 283 EPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDA 342

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           ++  +DM     + DVVTY  +I+   + K +++A  +  +M+E   EP + +Y  +I+G
Sbjct: 343 MKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQG 402

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
             AV R ++AL +   M+   V PN  TYT L  GLC   ++   +++  E + R + P 
Sbjct: 403 LCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKP- 461

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   +  LL   C+   L  A D+LK M +     +   Y  LI+   +      A+++ 
Sbjct: 462 NRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMH 521

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           D++  K          D+   + N + + L   G    A IF+R++  +G     +   L
Sbjct: 522 DEMENK--------GYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYL 573

Query: 421 -IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            I   S  G  + A  ++  M  +G   +   Y  +I+ + R+G   DA   L+ MIE+G
Sbjct: 574 AIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENG 633

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
             P +  +  +++     GR Q A ++  + +E+GV
Sbjct: 634 IGPDTGSYNILIKEFHNQGRTQDADQLYATALERGV 669



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 170/362 (46%), Gaps = 18/362 (4%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  MI+      K+  A  +L DM +     D   + ++I +  K+ +++++  +   M
Sbjct: 325 TYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKM 384

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ++ G E ++ +Y+AL + +    R   A      M   G+ P  +TY ++  G     +L
Sbjct: 385 RENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRL 444

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A   F +  +RG+  + VTYNT++NGY R  ++ EA  +  EM + +  P  ++YTT+
Sbjct: 445 DRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTL 504

Query: 238 IKGYVAVERADDALRIFDEM--KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           I+G V   +  DALR+ DEM  K +DV  N  T   L  GL   G   +     R M +R
Sbjct: 505 IQGLVQGNQLPDALRMHDEMENKGYDV--NFDTLNILARGLARVGNHKDASIFYRRMKDR 562

Query: 296 YIPPKDNSVFMKLLGVQCKS--GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
                 +  +   L + C S  G +  A  +L  MI          Y  +I+ FC+    
Sbjct: 563 GFAYSASDYY---LAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRL 619

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VL 412
           D A  +L+ ++E  I          +  SYN +I+   + G+T  A+  +   +++G VL
Sbjct: 620 DDADAMLNFMIENGI--------GPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVL 671

Query: 413 DP 414
           +P
Sbjct: 672 NP 673



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 113/533 (21%), Positives = 223/533 (41%), Gaps = 49/533 (9%)

Query: 107 VQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
            Q +++ F    KQ G + +  +Y  +  ++ R   +   +    KM ++G E TR   +
Sbjct: 196 AQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLH 255

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVV--TYNTMINGYNRFKKMDEAEKLFAEMK 223
             +  +  S + + ++  F  MK  G    ++   YN+++    + KK+D AE LFA+M 
Sbjct: 256 SFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMI 315

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
              +    ++YT+MI+ +   E+ +DA+++ D+M   +  P+ VTYT ++  LC    + 
Sbjct: 316 NNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIE 375

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           +   VL++M E    P +   +  L+   C       A +++  M +  +P     Y IL
Sbjct: 376 QAYGVLQKMRENGCEP-NIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTIL 434

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
               CK    DRA ++ ++ + +   L+P         +YN ++   C   +  +A    
Sbjct: 435 THGLCKLRRLDRAKEMFNEALARG--LKPNRV------TYNTLLNGYCRGSRLIEAMDIL 486

Query: 404 RQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           +++ +     D V +  LI+G  +      A  +   M  +G   + D    L     R 
Sbjct: 487 KEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARV 546

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G   DA      M + G + ++S +   +  L   G ++ A  ++  M+ KG   NL   
Sbjct: 547 GNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTY 606

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
             +++    +G +++A   ++ M+++G  P                              
Sbjct: 607 NTMIKGFCRQGRLDDADAMLNFMIENGIGP------------------------------ 636

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS----SDKLIAGL 631
             D  SY  ++      G+T +A  +    +E+G V + K      D+L  GL
Sbjct: 637 --DTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPKPVIQEPDELPEGL 687



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 100/465 (21%), Positives = 184/465 (39%), Gaps = 46/465 (9%)

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI--SYTTMIKG 240
             + M+++G  +     ++ +  Y R  +  E+ + F  MKE   EP +I  +Y +++  
Sbjct: 238 LLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVS 297

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
            V  ++ D A  +F +M +  V  N +TYT+++       KM +  K+L +M++    P 
Sbjct: 298 LVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAP- 356

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  ++   CK   +  A  VL+ M           Y  LI+  C     + A++L 
Sbjct: 357 DVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALEL- 415

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFN 418
                  + L  Q  +     +Y  +   LC   +  +A+  F + + +G L P  V +N
Sbjct: 416 -------VTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARG-LKPNRVTYN 467

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L+ G+ +      A +I+K M +     D   Y  LI+  ++  +  DA    D M   
Sbjct: 468 TLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENK 527

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G+         +   L   G  + AS   + M ++G   +       +  L   G +EEA
Sbjct: 528 GYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEA 587

Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
              +  M+  G  PN                                L +Y  ++     
Sbjct: 588 QALLYEMINKGYSPN--------------------------------LTTYNTMIKGFCR 615

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            G+  +A ++L  ++E G   D  S + LI   + +G T+ AD L
Sbjct: 616 QGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQL 660



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 115/279 (41%), Gaps = 39/279 (13%)

Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           + G++D  A+N+++    K    D A  +   M   GV  +   Y  +I+ +  K +  D
Sbjct: 283 EPGLID-TAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMED 341

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A   LD MI++ ++P    +  V+ +L +   ++ A  V++ M E G + N+     +++
Sbjct: 342 AMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQ 401

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---------------------------------- 553
            L      EEAL  + LM Q G  PN                                  
Sbjct: 402 GLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKP 461

Query: 554 ----FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
               +++LL+      + I A+ +L      DC  D  +Y  ++  L+   +  +A  + 
Sbjct: 462 NRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMH 521

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
            ++  KG   ++ + + L  GL + GN K A I  R ++
Sbjct: 522 DEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMK 560


>gi|293334437|ref|NP_001169582.1| uncharacterized protein LOC100383463 [Zea mays]
 gi|224030203|gb|ACN34177.1| unknown [Zea mays]
 gi|413935329|gb|AFW69880.1| hypothetical protein ZEAMMB73_684747 [Zea mays]
          Length = 622

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 260/507 (51%), Gaps = 20/507 (3%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETA---IRFFEDM-KSRGISLDVVTYNTMINGYNRFKK 211
           G  P   T N ++ G   +    ++   +R F  + ++   + D +TYN+M+    R   
Sbjct: 110 GASPDVATLNTLIHGLSTASPRPSSPALLRLFRFLPEAYAFAPDAITYNSMLAALCRAGD 169

Query: 212 MDEAEKLFAEMK------EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
           +  A +LF  M+      E    P V++YTTMI+   A   AD+AL +F  M +  V+PN
Sbjct: 170 LATARRLFDGMRAGEQGGEAGAFPNVVAYTTMIRACCASRLADEALSLFKMMLADGVRPN 229

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            +TY  ++ G C AG+M  V++V    ++ + P  D   F  L+   C+ G +  A  V 
Sbjct: 230 RITYNTMVQGFCQAGRMELVKEVFG--MDSFKP--DTCTFNTLMAAHCREGRIQDAKKVF 285

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             M+ L +  ++  Y I+    C+   + RA +L+D L+EKE++ +    + + AS YNP
Sbjct: 286 DQMMELRVRRDSASYSIVTRALCENGEFGRAEELVDSLLEKEVLKKRGGCVPLIAS-YNP 344

Query: 386 MIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           + ++LC NG+  KA + F QL+  +  +D +AF  LI GH KEG+ +  +E+V  M +R 
Sbjct: 345 VFKYLCENGKAKKARLLFGQLLDIRSKVDFLAFKTLILGHCKEGDFEEGYELVLSMLKRD 404

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF-EDGRVQTA 503
           +  D++ YI +I+ +++KG    A  AL  M+  G  P++S F SV+  L  +DG  + A
Sbjct: 405 LMPDSECYIAVIDGFMQKGRMKSAWEALHRMLNSGLRPSTSTFHSVLLGLLKKDGCAKEA 464

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
           + +++ M+E+ +++N+DL   ++  L      + A      +  +G     + L++ L E
Sbjct: 465 ADLIEIMLERKIRQNVDLSTNLIGVLFKSDLNDRAYKITKHLYDNGYYIKMEKLIATLCE 524

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
             K I A +   F L +   + +A + +VLD L +  +T  A+ + +++ E    +   +
Sbjct: 525 DKKFIDAAEFSLFSLRKRHELGVAVHSQVLDGLCSDRRTSEAFQLFYELNENKRTSAVAA 584

Query: 624 SDKLI---AGLNQEGNTKQADILSRMI 647
              L+     L + G  ++A  +++ +
Sbjct: 585 PRSLVFLHHALEEAGMVQEAGFVAKQM 611



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/349 (20%), Positives = 150/349 (42%), Gaps = 20/349 (5%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED-- 92
           +S   L+ FR++  A  F  D  T+  M+  L R G L  AR  L D  + G Q  E   
Sbjct: 133 SSPALLRLFRFLPEAYAFAPDAITYNSMLAALCRAGDLATAR-RLFDGMRAGEQGGEAGA 191

Query: 93  -----MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
                 +  +I +     +  E++ +F +M   GV  +  +Y+ + +   + GR  + K 
Sbjct: 192 FPNVVAYTTMIRACCASRLADEALSLFKMMLADGVRPNRITYNTMVQGFCQAGRMELVKE 251

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
            F     +  +P   T+N ++       +++ A + F+ M    +  D  +Y+ +     
Sbjct: 252 VFGM---DSFKPDTCTFNTLMAAHCREGRIQDAKKVFDQMMELRVRRDSASYSIVTRALC 308

Query: 208 RFKKMDEAEKLFAEMKEKNI-------EPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
              +   AE+L   + EK +        P + SY  + K      +A  A  +F ++   
Sbjct: 309 ENGEFGRAEELVDSLLEKEVLKKRGGCVPLIASYNPVFKYLCENGKAKKARLLFGQLLDI 368

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             K + + +  L+ G C  G   E  +++  M++R + P D+  ++ ++    + G + +
Sbjct: 369 RSKVDFLAFKTLILGHCKEGDFEEGYELVLSMLKRDLMP-DSECYIAVIDGFMQKGRMKS 427

Query: 321 AADVLKAMIRLSI-PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           A + L  M+   + P+ +  + +L+    K      A  L++ ++E++I
Sbjct: 428 AWEALHRMLNSGLRPSTSTFHSVLLGLLKKDGCAKEAADLIEIMLERKI 476



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/332 (20%), Positives = 142/332 (42%), Gaps = 36/332 (10%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL-LDMPKKGVQWDEDMF 94
           ++ AL  F+ +   G+   +R T+  M++   + G++   + +  +D      + D   F
Sbjct: 211 ADEALSLFKMMLADGV-RPNRITYNTMVQGFCQAGRMELVKEVFGMD----SFKPDTCTF 265

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             L+ ++ ++G +Q++ K+FD M +L V R   SY  + + +   G +  A+   + +L 
Sbjct: 266 NTLMAAHCREGRIQDAKKVFDQMMELRVRRDSASYSIVTRALCENGEFGRAEELVDSLLE 325

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV-TYNTMINGYNRFKKMD 213
           +                             E +K RG  + ++ +YN +        K  
Sbjct: 326 K-----------------------------EVLKKRGGCVPLIASYNPVFKYLCENGKAK 356

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  LF ++ +   +   +++ T+I G+      ++   +   M   D+ P++  Y A++
Sbjct: 357 KARLLFGQLLDIRSKVDFLAFKTLILGHCKEGDFEEGYELVLSMLKRDLMPDSECYIAVI 416

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G    G+M    + L  M+   + P  ++    LLG+  K G    AAD+++ M+   I
Sbjct: 417 DGFMQKGRMKSAWEALHRMLNSGLRPSTSTFHSVLLGLLKKDGCAKEAADLIEIMLERKI 476

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
                    LI    K+++ DRA K+   L +
Sbjct: 477 RQNVDLSTNLIGVLFKSDLNDRAYKITKHLYD 508


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 165/610 (27%), Positives = 298/610 (48%), Gaps = 23/610 (3%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A + F  + ++G    D  T + +IE L   GKL+ A  +  +M ++G +   ++ + 
Sbjct: 176 DEAYELFERMRKSGCLG-DYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDS 234

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI +  K G V E+ +I+  +    V  S  +Y++L     + GR     +   +M+   
Sbjct: 235 LIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECD 294

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P   TYN+++ GF  + +L+ A+  F+ + S G   +  TY T+I G    ++M+EA+
Sbjct: 295 NFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAK 354

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
             F E  +      VISYTT+IKG    +R D+A  +F+++K+    PN V YTA++ GL
Sbjct: 355 AFFDEALD------VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGL 408

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
             AG++ +  K   +M      P   +  + + G+ CK+  L  A  V + M++     +
Sbjct: 409 LKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGL-CKAQMLPDACKVFEQMVQKGCVPD 467

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI+ F KA   D A KLLD ++ K     P+ T    A +Y  ++   C     
Sbjct: 468 TITYTTLIDGFSKASKMDEARKLLDVMLTK----GPEPT----AVTYGSIVHGFCKLDMI 519

Query: 397 GKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
            +A+    Q+ ++G  +P    F +L+  +  +G  + A++++  M  RG   D   Y  
Sbjct: 520 NEAKEVIAQMRERGC-EPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 578

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI+     G   +A+   DSMIE G +P +  + +++++  + G V+ A  +++ M + G
Sbjct: 579 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 638

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           V  +      +++  +    V++A G  D M+ SG  PN   F+ L+  L + GKT  A 
Sbjct: 639 VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAF 698

Query: 572 KLLDFCLGRDCII-DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            L    L +D +   L SY  ++D L  AG+   A+S   +++++G + +  +   LI  
Sbjct: 699 SLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYS 758

Query: 631 LNQEGNTKQA 640
           L + G   +A
Sbjct: 759 LAKAGRIPEA 768



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 251/534 (47%), Gaps = 22/534 (4%)

Query: 26  VYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            YN+L      A   + AL+ F+ +   G    +  T+  +I+ L    ++  A+    +
Sbjct: 301 TYNILVAGFSRANRLDDALELFKLLSSYGC-KPNAATYTTIIQGLYDAQRMEEAKAFFDE 359

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
                   D   +  +I+       + E+ ++F+ +K  G   +V +Y A+   +L+ GR
Sbjct: 360 ------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
                + F  M      PTR TY V++ G   +  L  A + FE M  +G   D +TY T
Sbjct: 414 IEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTT 473

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G+++  KMDEA KL   M  K  EPT ++Y +++ G+  ++  ++A  +  +M+   
Sbjct: 474 LIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 533

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +P    +T+LL      G+  E  +VL EM  R   P D  ++  L+ +   +G +  A
Sbjct: 534 CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP-DVILYTSLIDLLFSTGRVPEA 592

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             V  +MI      +A  YG +I+NF K    + A ++L+        L  +S +  +  
Sbjct: 593 RHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE--------LMAKSGVGPDCF 644

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK-I 439
           +YN ++       +  +A   + +++  G+  + V FN L+ G  K+G  D AF + K +
Sbjct: 645 AYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEM 704

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           + +  VP    +Y  LI+   + G  ++A +    MI+ G  P    + S++ SL + GR
Sbjct: 705 LEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGR 764

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +  A ++++ MV+ GV  ++   + ++  L+    V+ A      MM+ G  PN
Sbjct: 765 IPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 818



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 150/638 (23%), Positives = 274/638 (42%), Gaps = 81/638 (12%)

Query: 37  EHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           + A + +R  +ER   +    E    +I  L + GK++ A  I   +  K V      + 
Sbjct: 211 DEACELYREMIERG--YEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYN 268

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            L++ Y K G V + +K+   M +      +++Y+ L     R  R   A   F  + S 
Sbjct: 269 SLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSY 328

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G +P   TY  ++ G + + ++E A  FF++      +LDV++Y T+I G    K++DEA
Sbjct: 329 GCKPNAATYTTIIQGLYDAQRMEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEA 382

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            +LF ++K     P V++YT +I G +   R +D L+ F++M      P   TYT ++ G
Sbjct: 383 CELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDG 442

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC A  + +  KV  +MV++   P D   +  L+    K+  ++ A  +L  M+      
Sbjct: 443 LCKAQMLPDACKVFEQMVQKGCVP-DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEP 501

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP----------------------Q 373
            A  YG ++  FCK +M + A +++ ++ E+     P                      Q
Sbjct: 502 TAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC--EPGLFIFTSLLSYYLSKGRAEEAYQ 559

Query: 374 STLDMEASS-------YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHS 425
              +M A         Y  +I  L   G+  +A   F  +++KG   D + +  +I+  S
Sbjct: 560 VLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFS 619

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K GN ++A EI+++M + GV  D  AY  L++ Y++      A    D M+  G  P + 
Sbjct: 620 KIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAV 679

Query: 486 LFRSVMESLF------------------------------------EDGRVQTASRVMKS 509
            F  +M  LF                                    + GRV  A    + 
Sbjct: 680 TFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQE 739

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M+++G+         ++ +L   G + EA   ++ M++ G  P+   + +L++ L +   
Sbjct: 740 MIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSM 799

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
              A  +    + R C  +  +Y+ +     AAG+ L+
Sbjct: 800 VDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 837



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/497 (23%), Positives = 227/497 (45%), Gaps = 43/497 (8%)

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +E A+   ++M + G+  DVV  N ++NG  + +K+D+A +LF EM     EPT++SY T
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G  ++++ D+A + F+ M     +P+ + +T L+ G C AG+      +L + ++R+
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
            P  D  ++  ++   CK+G L+    +L+ M+      +A  Y +LI+  CK    D A
Sbjct: 121 RP--DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178

Query: 357 IKLLDKLVEKEII------------LRPQSTLDMEASSYNPMIQH--------------- 389
            +L +++ +   +            L     LD     Y  MI+                
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238

Query: 390 LCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC  G+  +A EI+   + KK     VA+N+L+ G+ K G  D   +++  M       D
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPD 298

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  L+  + R     DA      +   G  P ++ + ++++ L++  R++ A     
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF- 357

Query: 509 SMVEKGVKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
                   E LD+++   +++ L     ++EA    + +  +G  PN   + +++  L +
Sbjct: 358 -------DEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+    +K  +   G  C+    +Y  V+D L  A    +A  +  ++++KG V D  +
Sbjct: 411 AGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 470

Query: 624 SDKLIAGLNQEGNTKQA 640
              LI G ++     +A
Sbjct: 471 YTTLIDGFSKASKMDEA 487



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 143/651 (21%), Positives = 268/651 (41%), Gaps = 55/651 (8%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL   + +   GL       ++ ++  L +  K++ A  + L+MP  G +     +  
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNI-VLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I        + E+ K F+ M   G E  V ++  L     + G+  +     N+ L   
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P    Y  ++ G+  +  L+T  +  E+M + G   D   Y  +I+   +  ++DEA 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +LF  M++       +++ T+I+      + D+A  ++ EM     +P      +L+  L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C AGK+ E  ++ + +V + +       +  L+   CK G ++    +L  M+      +
Sbjct: 240 CKAGKVDEANEIYQTVVAKKV-ATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPD 298

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y IL+  F +A   D A++L   L       +P       A++Y  +IQ L    + 
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLL--SSYGCKPN------AATYTTIIQGLYDAQRM 350

Query: 397 GKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
            +A+ FF +      LD +++  +I+G +     D A E+ + +   G   +  AY  +I
Sbjct: 351 EEAKAFFDE-----ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVI 405

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV- 515
           +  L+ G   D     + M      P  + +  V++ L +   +  A +V + MV+KG  
Sbjct: 406 DGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCV 465

Query: 516 ---------------KENLDLVAKILEALLMRGH-------------------VEEALGR 541
                             +D   K+L+ +L +G                    + EA   
Sbjct: 466 PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEV 525

Query: 542 IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
           I  M + G  P    F SLLS    KG+   A ++L     R C  D+  Y  ++D L +
Sbjct: 526 IAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 585

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
            G+   A  +   ++EKG   D  +   +I   ++ GN + A +IL  M +
Sbjct: 586 TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 636



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 201/429 (46%), Gaps = 13/429 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + +V + L  A+    A + F  + + G    D  T+  +I+   +  K++ AR +L  M
Sbjct: 436 YTVVIDGLCKAQMLPDACKVFEQMVQKGCV-PDTITYTTLIDGFSKASKMDEARKLLDVM 494

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG +     +  ++  + K  ++ E+ ++   M++ G E  +  + +L    L +GR 
Sbjct: 495 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 554

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +   +M + G  P    Y  ++   F + ++  A   F+ M  +G + D +TY T+
Sbjct: 555 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 614

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  +++   ++ A ++   M +  + P   +Y +++ GYV +ER D A  ++D M +  +
Sbjct: 615 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAA 321
           KPNAVT+  L+ GL   GK      + +EM+E+  +PP   S  + + G+  K+G ++ A
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLG-KAGRVSEA 733

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
               + MI   I  E   Y  LI +  KA     A KL++ +V+  +        + +  
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGV--------NPDVQ 785

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y+ +I  L  +     A   F+++MK+G   + V +  L RG    G      E VK  
Sbjct: 786 AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD-LEAVKQH 844

Query: 441 GRRGVPRDA 449
             +GV  +A
Sbjct: 845 FSQGVAMEA 853


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 154/607 (25%), Positives = 272/607 (44%), Gaps = 19/607 (3%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           LVP    ++V  VL    + + A++FF W      + H + T   ++    R  K   A 
Sbjct: 97  LVP----SVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAY 152

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            +  +        D   +  LI  + K    Q++ ++ D M++ G+      Y+ + K +
Sbjct: 153 DLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGL 212

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
              GR   A  ++  M      P+  TY +++     S ++  A    EDM   G + +V
Sbjct: 213 CDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNV 271

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VTYNT+ING+ +   MDEA  LF +M E +  P V +Y  +I GY   ER  D  ++  E
Sbjct: 272 VTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQE 331

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M  +  +PN +TY  L+  L  +GK ++   + + M+ R   P  +  F  ++ + CK G
Sbjct: 332 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS-HFTFNLMIDMFCKVG 390

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L+ A ++ + M       +   Y I+I   C+A   D A +LL+++ E        +  
Sbjct: 391 QLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE--------AGC 442

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFE 435
             +  +YN ++  LC   Q  +A   +  L   G  LD V  + LI G  K    D A +
Sbjct: 443 PPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEK 502

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +++ M R G   D  AY  LI  + +  +   +      M++ G  P    +  V++ L 
Sbjct: 503 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 562

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP--- 552
           +  RV+    ++K+M+E+GV  +  +   +++ L      +EA     LM Q+G  P   
Sbjct: 563 KSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVV 622

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            ++ L+  L +  +   A+ LL+      C+ D  +Y  V D    + +   A+  LF+ 
Sbjct: 623 TYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFR-LFQA 681

Query: 613 MEKGGVT 619
           M+  G +
Sbjct: 682 MKSRGCS 688



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/547 (23%), Positives = 250/547 (45%), Gaps = 31/547 (5%)

Query: 15  RALVPQFDHNLVYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           R +VP   HN VYN ++ G  ++   + AL  +R ++R         T+  +++ L +  
Sbjct: 196 RGIVP---HNAVYNTIIKGLCDNGRVDSALVHYRDMQRNC--APSVITYTILVDALCKSA 250

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           +++ A  IL DM + G   +   +  LI  + K G + E+V +F+ M +      V +Y+
Sbjct: 251 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 310

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L     ++ R     +   +M+  G EP   TYN ++     S K   A    + M  R
Sbjct: 311 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 370

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
                  T+N MI+ + +  ++D A +LF  M ++   P + +Y  MI G     R DDA
Sbjct: 371 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 430

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
            ++ + M      P+ VTY +++ GLC A ++ E  +V   +       ++   F+ ++ 
Sbjct: 431 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL-------RNGGYFLDVVT 483

Query: 311 VQ------CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
                   CKS  L+ A  +L+ M R     +   Y ILI  FCKA+  D+++    +++
Sbjct: 484 CSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML 543

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
           +K  +            +Y+ +I  LC + +     +  + ++++GV  D + + ++I G
Sbjct: 544 DKGCV--------PTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDG 595

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K  + D A+E+ K+M + G       Y  L++   +     +A   L+ M  DG  P 
Sbjct: 596 LCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPD 655

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
           +  + SV +  ++      A R+ ++M  +G      + + +L  L+    +++A+   +
Sbjct: 656 TVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWE 715

Query: 544 LMMQSGS 550
             +++G+
Sbjct: 716 EALEAGA 722



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 235/510 (46%), Gaps = 17/510 (3%)

Query: 145 AKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           A ++F+    + G + ++ T N +L  F    K + A   F++ +    S D +TY+T+I
Sbjct: 115 AVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLI 174

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG+ + +   +A +L  EM+++ I P    Y T+IKG     R D AL  + +M+  +  
Sbjct: 175 NGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCA 233

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ +TYT L+  LC + ++ +   +L +M+E    P +   +  L+   CK G+++ A  
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAP-NVVTYNTLINGFCKLGNMDEAVV 292

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +   M+  S   +   Y ILI+ +CK E      KLL ++V        +   +    +Y
Sbjct: 293 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV--------KYGCEPNFITY 344

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           N ++  L  +G+   A     Q+M +    P    FN +I    K G  D A+E+ ++M 
Sbjct: 345 NTLMDSLVKSGKYIDA-FNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 403

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            RG   D   Y  +I    R     DA+  L+ M E G  P    + S++  L +  +V 
Sbjct: 404 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 463

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A  V + +   G   ++   + +++ L     +++A   +  M ++GS P+   +  L+
Sbjct: 464 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 523

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
               +  +   ++      L + C+  + +Y  V+D L  + +  +   +L  ++E+G  
Sbjct: 524 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVT 583

Query: 619 TDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
            D      +I GL +  +  +A  L ++++
Sbjct: 584 PDAIVYTSVIDGLCKSDSYDEAYELYKLMK 613


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 271/596 (45%), Gaps = 27/596 (4%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM---FEVLIESYGKKGIVQ 108
           F+ D  TH  +++   ++G L+ A         +G  W       + +LI    +   + 
Sbjct: 55  FSPDVITHNTILKAYCQIGDLDRALSHF-----RGKMWCSPTAFTYCILIHGLCQCQRID 109

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           E+ ++ D M Q         Y+ L   + + G+   A+     ML     P   TY  ++
Sbjct: 110 EAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLI 169

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G   +  L+ A +  E MK  G++ D V YN ++NG  +  +++E  KL  EM E   E
Sbjct: 170 VGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGRE 229

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P   SY T++       + ++A +I ++M      P+ VTY +L+ G C   KM E +++
Sbjct: 230 PDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERL 289

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L +MV R   P   + +  L+G   ++  L  A  V++ M +  I  +   Y  L++  C
Sbjct: 290 LEDMVGRRCAPTVIT-YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC 348

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           KA   + A +LL+ +VEK+    P      +  +Y+ ++  LC  G+   A +    +++
Sbjct: 349 KAGKLEEAHELLEVMVEKDC--AP------DVVTYSILVNGLCKLGKVDDARLLLEMMLE 400

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +G   + V FN +I G  K G  D   +++++M       D   Y  LI+ Y +     D
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQD 460

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A   L      G SP  + + S++E L   G+V+ A  VM  M ++G        A I+ 
Sbjct: 461 AFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIG 514

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
            L      +EAL  + +M + G  PN   +  L++ L +  +   A+ +LD  L + C+ 
Sbjct: 515 GLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVP 574

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D+A+Y  ++D      K   AY     + + G   D  + + LI+G  Q GN ++A
Sbjct: 575 DVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKA 630



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 256/532 (48%), Gaps = 29/532 (5%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  +I  L ++GK++ AR +L  M ++    D   +  LI    +   + E+ K+ 
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + MK+ G+     +Y+AL   + ++ +     +   +M+  G EP   +YN ++     S
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K E A +  E M  +    DVVTYN++++G+ +  KMDEAE+L  +M  +   PTVI+Y
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           TT+I G+   +R  DA R+ ++M    + P+ VTY  LL GLC AGK+ E  ++L  MVE
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           +   P D   +  L+   CK G ++ A  +L+ M+          +  +I+ FCKA   D
Sbjct: 366 KDCAP-DVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVD 424

Query: 355 RAIKLLDKLVEKEIILRPQ----STL-------------------DMEASSYNPMIQHLC 391
              K+L+ +  KE+   P     STL                     + +SY+ M++ LC
Sbjct: 425 EGHKVLELM--KEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLC 482

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
             G+  +A+     + K+G   P +  +  +I G       D A +++++M  RG   + 
Sbjct: 483 STGKVEEAQEVMDLMTKQGC-PPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNL 541

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  LI    +     DA   LD M+E G  P  + + S+++   +  ++  A +  K+
Sbjct: 542 YTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKT 601

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
           M + G + +      ++      G+VE+A+  + LM++ G  P+  +  S++
Sbjct: 602 MRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 153/620 (24%), Positives = 273/620 (44%), Gaps = 30/620 (4%)

Query: 23  HNLVYNVLHGAKNSEHALQFFR---WVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           HN +        + + AL  FR   W            T+  +I  L +  +++ A  +L
Sbjct: 62  HNTILKAYCQIGDLDRALSHFRGKMWCSPTAF------TYCILIHGLCQCQRIDEAYQLL 115

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M +K    D  ++  LI    K G +  +  +  +M +      V +Y +L     + 
Sbjct: 116 DEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQT 175

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                A++   KM   G+ P    YN +L G     +LE   +  E+M   G   D  +Y
Sbjct: 176 NALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT++       K +EA K+  +M EK   P V++Y +++ G+  V + D+A R+ ++M  
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVG 295

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               P  +TYT L+ G   A ++ +  +V+ +M +  I P D   +  LL   CK+G L 
Sbjct: 296 RRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISP-DLVTYNCLLDGLCKAGKLE 354

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A ++L+ M+      +   Y IL+   CK    D A  LL+ ++E+      Q  L   
Sbjct: 355 EAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGC----QPNL--- 407

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIV 437
             ++N MI   C  G+  +      +LMK+    P  V ++ LI G+ K      AF I+
Sbjct: 408 -VTFNTMIDGFCKAGKVDEGHKVL-ELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL 465

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
                 G+  D  +Y  ++E     G+  +A+  +D M + G  P SS +  ++  L + 
Sbjct: 466 ------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDV 519

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
            R   A ++++ M E+G + NL   + ++  L     VE+A+  +D+M++ G VP+   +
Sbjct: 520 ERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATY 579

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            SL+    +  K  AA +         C  D  +Y  ++     +G    A  ++  ++E
Sbjct: 580 TSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLE 639

Query: 615 KGGVTDWKSSDKLIAGLNQE 634
           KG   D  +   L+  L  E
Sbjct: 640 KGCNPDAATYFSLMRSLTTE 659



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 240/505 (47%), Gaps = 23/505 (4%)

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R +    +F +  S+  +P+  TY  ++ GF  +   +  +    +M +R  S DV+T+N
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T++  Y +   +D A   F    +    PT  +Y  +I G    +R D+A ++ DEM   
Sbjct: 64  TILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           D  P+A  Y  L+ GLC  GK+   + VL+ M+ER   P D   +  L+   C++  L+ 
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVP-DVITYTSLIVGCCQTNALDE 180

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +++ M    +  +   Y  L+   CK    +   KLL+++VE     R   T     
Sbjct: 181 ARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG---REPDTF---- 233

Query: 381 SSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            SYN ++  LC +G+  +A +I  + + KK   D V +N+L+ G  K    D A  +++ 
Sbjct: 234 -SYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLED 292

Query: 440 M-GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
           M GRR  P     Y  LI  + R    ADA   ++ M + G SP    +  +++ L + G
Sbjct: 293 MVGRRCAPT-VITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAG 351

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           +++ A  +++ MVEK    ++   + ++  L   G V++A   +++M++ G  PN   F+
Sbjct: 352 KLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFN 411

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +++    + GK     K+L+      C  D+ +Y  ++D    A +  +A++IL      
Sbjct: 412 TMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------ 465

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQA 640
           G   D  S   ++ GL   G  ++A
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEA 490



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 190/415 (45%), Gaps = 18/415 (4%)

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           R  +    F E  S   KP+  TY AL+ G   AG    V ++  EM+ R   P D    
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSP-DVITH 62

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             +L   C+ G L+ A    +  +  S PT A  Y ILI   C+ +  D A +LLD++++
Sbjct: 63  NTILKAYCQIGDLDRALSHFRGKMWCS-PT-AFTYCILIHGLCQCQRIDEAYQLLDEMIQ 120

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGH 424
           K+    P      +A+ YN +I  LC  G+   A    + ++++  V D + + +LI G 
Sbjct: 121 KDC--HP------DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGC 172

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            +    D A ++++ M   G+  D  AY  L+    ++ +  +    L+ M+E G  P +
Sbjct: 173 CQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             + +V+  L E G+ + A ++++ M+EK    ++     +++       ++EA   ++ 
Sbjct: 233 FSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLED 292

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M+     P    + +L+   S   +   A ++++         DL +Y  +LD L  AGK
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQ 656
              A+ +L  ++EK    D  +   L+ GL + G    A +L  M+   + RG Q
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMM---LERGCQ 404


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 172/633 (27%), Positives = 297/633 (46%), Gaps = 18/633 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+  N L  +K    A++  R +   GL   D  T+  ++  L R+ +      ++ +M
Sbjct: 263 YNVFINGLCKSKRVWEAVEVKRSLGEKGL-KADLVTYCTLVLGLCRIQEFEVGMEMMDEM 321

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G    E     LIE   K G ++ + ++ + + +LGV  ++  Y+++   + + G+ 
Sbjct: 322 IELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKL 381

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F+ M   G+ P   TY +++ GF    KL+ A  +F  M   GIS  V +YN+M
Sbjct: 382 EEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSM 441

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           IN   +F KM  AE LF EM +K ++PTV +YT++I GY        A +++ EM    +
Sbjct: 442 INCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGI 501

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN VT+TAL+ GLC   KM E  K+  EMVE  I P + + +  L+   C+ G+   A 
Sbjct: 502 APNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVT-YNVLIEGHCREGNTTRAF 560

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++L  MI+  +  +   Y  LI   C       A + ++ L  K           ++   
Sbjct: 561 ELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKH--------QRLDELC 612

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  ++Q  C  G+  +A +  ++++ +G+ +D V++  LI G   + N    FE+++ M 
Sbjct: 613 YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQ-NDRILFELLREMH 671

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            +G+  D   Y  LI+ +++ G    A      MI +G+ P S  + +++  LF+ G V 
Sbjct: 672 GKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVN 731

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A  + K M+      N       L+ L   G++E AL   + M+Q GS  N   ++ L+
Sbjct: 732 EAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILI 790

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
               + GK   A KLLD  +G   + D  +Y   +      G    A  +   ++++G  
Sbjct: 791 RGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLK 850

Query: 619 TDWKSSDKLIAGLNQEGNTKQADILSR--MIRG 649
            D    + LI      G   +A  L    M+RG
Sbjct: 851 PDRVVFNFLIHACCLNGELDRALQLRNDMMLRG 883



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 123/546 (22%), Positives = 226/546 (41%), Gaps = 78/546 (14%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI  L + GKL  A  +   M ++G+  ++  + +LI+ +G++  +  +   F+ M + G
Sbjct: 371 MINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECG 430

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V SY+++     + G+  MA+  F +M+ +G++PT  TY  ++ G+     +  A 
Sbjct: 431 ISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAF 490

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + + +M  +GI+ + VT+  +I G  +  KM EA KLF EM E  I P  ++Y  +I+G+
Sbjct: 491 KLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGH 550

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTY-------------------------------- 269
                   A  + DEM    + P+  TY                                
Sbjct: 551 CREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610

Query: 270 ---TALLPGLCDAGKMVE----------------------------------VQKVLREM 292
              TALL G C  G++ E                                  + ++LREM
Sbjct: 611 LCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREM 670

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
             + + P DN ++  L+    KSG+L  A +    MI       +  Y  L+    KA  
Sbjct: 671 HGKGMQP-DNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGY 729

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            + A  L  +++  E I  P         +Y   + HL   G    A      +++    
Sbjct: 730 VNEAKLLFKRMLVGEAI--PNHI------TYGCFLDHLTKEGNMENALQLHNAMLQGSFA 781

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           + V +N LIRG+ + G    A +++ +M   G+  D   Y   I  Y ++G    A    
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMW 841

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           + M++ G  P   +F  ++ +   +G +  A ++   M+ +G+K        ++  L  R
Sbjct: 842 ECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQR 901

Query: 533 GHVEEA 538
             + + 
Sbjct: 902 ARLTQV 907



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 128/601 (21%), Positives = 239/601 (39%), Gaps = 85/601 (14%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S   +D L +  ++  R M      N M   G+ P   T + +L       K    +  F
Sbjct: 154 SSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELF 213

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           + + + G+  D   Y  ++      K  ++A+++  + +      ++++Y   I G    
Sbjct: 214 DTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKS 273

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPK--- 300
           +R  +A+ +   +    +K + VTY  L+ GLC   +     +++ EM+E  Y+P +   
Sbjct: 274 KRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAV 333

Query: 301 ------------------------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
                                         +  V+  ++   CK+G L  A  +   M  
Sbjct: 334 SGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAE 393

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +      Y ILI+ F +    D A    +K++E          +     SYN MI   
Sbjct: 394 RGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE--------CGISATVYSYNSMINCQ 445

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C  G+   AE+ F++++ KG+   VA + +LI G+ K+G    AF++   M  +G+  + 
Sbjct: 446 CKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNT 505

Query: 450 ---DAYIC--------------------------------LIESYLRKGEPADAKTALDS 474
               A IC                                LIE + R+G    A   LD 
Sbjct: 506 VTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDE 565

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           MI+ G SP +  +R ++  L   GRV  A   +  +  K  + +      +L+     G 
Sbjct: 566 MIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGR 625

Query: 535 VEEALGRIDLMMQSG---SVPNFDSLLS-VLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
           ++EAL     M+  G    + ++  L+S  L++  + +   +LL    G+    D   Y 
Sbjct: 626 IKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRIL--FELLREMHGKGMQPDNVIYT 683

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL-SRMIRG 649
            ++D  + +G    A+   + ++ +G V +  +   L+ GL + G   +A +L  RM+ G
Sbjct: 684 ILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVG 743

Query: 650 E 650
           E
Sbjct: 744 E 744



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 34/243 (13%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L +M  KG+Q D  ++ +LI+ + K G ++++ + + IM   G   +  +Y AL   + 
Sbjct: 666 LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLF 725

Query: 138 RRGRYMMAKRYFNKMLS----------------------------------EGIEPTRHT 163
           + G    AK  F +ML                                   +G      T
Sbjct: 726 KAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVT 785

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
           YN+++ G+    K + A +  + M   G+  D +TY+T I  Y +   +D A  ++  M 
Sbjct: 786 YNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECML 845

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           ++ ++P  + +  +I         D AL++ ++M    +KP   TY +L+  L    ++ 
Sbjct: 846 QRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLT 905

Query: 284 EVQ 286
           +VQ
Sbjct: 906 QVQ 908


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 161/641 (25%), Positives = 300/641 (46%), Gaps = 63/641 (9%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
           R+    LQ+K  +  P   H  + +++   K++  ALQ FRW      F H++ T+  +I
Sbjct: 75  RSSVVNLQSKPISTTPVPTHQHIAHLILEQKSASQALQTFRWASNLPNFIHNQSTYRALI 134

Query: 64  EILGRVGKLNHARCILLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
             L    +    + +L +MP   G   DE +F  ++   G+  +V++ +K+ D++ + G 
Sbjct: 135 HKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGE 194

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             S+K ++++  ++++    +  + Y  KM+  G+    +T+ +++ G  L+ ++  A +
Sbjct: 195 NPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFK 254

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
             + MKSRG + + V YNTMI+   +  K+  A  L  EM    +EP+ +++  +I  Y 
Sbjct: 255 LLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYC 310

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
             E    AL + ++  S    P+ VT T ++  LC AG++ E  +VL E VE      D 
Sbjct: 311 QEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVL-ERVESMGGVVDV 369

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             +  L+   C  G       VLK M I+  +P     Y IL   +C + M D AI L +
Sbjct: 370 VAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPN-VDTYNILASGYCDSGMLDSAIDLFN 428

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR--QLMKK------GVLD 413
            +    I        +    +Y+ +I+ LC     G+ E  F+  +LM++      G + 
Sbjct: 429 DMKTDGI--------NWNFMTYDTLIRGLCSG---GRMEDGFKILELMEESRGGAGGRIS 477

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           P  +N++I G  K+   + A E +  M  +  PR  D  + ++  +  +G   DAK   D
Sbjct: 478 P--YNSIIYGLYKKNQFEEALEFLTKM-EKLFPRAVDRSLRIL-GFCNEGSIGDAKRVYD 533

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            MI++G  P+  ++  ++    +DG V+ A  ++  MV+ G                   
Sbjct: 534 QMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFP---------------- 577

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
                           + P F++L+S    +GK  +A+KL++  +GR C+ D+ SY  ++
Sbjct: 578 ----------------TAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMV 621

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           DAL   G    A  +  +++EK  + D+ + + ++  L QE
Sbjct: 622 DALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 662



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 1/164 (0%)

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+ +G S     F  +M+ L    R+  A ++++ M  +G   N  +   ++ AL   G 
Sbjct: 224 MMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGK 283

Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           V  A   ++ M++   V  F+ L+S   ++   + A+ LL+       + D+ +  KV+ 
Sbjct: 284 VGRARSLMNEMVEPSDV-TFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVG 342

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
            L  AG+      +L ++   GGV D  + + LI G    G  K
Sbjct: 343 ILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAK 386



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 87/202 (43%), Gaps = 9/202 (4%)

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           K M   GV  D   +  L++         DA   L  M   G +P + ++ +++ +L ++
Sbjct: 222 KKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKN 281

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKIL-EALLMRGHVEEALGRIDLMMQSGSVPNF-- 554
           G+V  A  +M  MVE       D+   +L  A     ++ +AL  ++     G VP+   
Sbjct: 282 GKVGRARSLMNEMVEPS-----DVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVT 336

Query: 555 -DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
              ++ +L + G+    V++L+       ++D+ +Y  ++      GK    + +L  + 
Sbjct: 337 ATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDME 396

Query: 614 EKGGVTDWKSSDKLIAGLNQEG 635
            KG + +  + + L +G    G
Sbjct: 397 IKGCLPNVDTYNILASGYCDSG 418


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/617 (25%), Positives = 277/617 (44%), Gaps = 17/617 (2%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           ++ + L  A   E A + F  +   G    DR  H  M+  L +  ++  AR +   M K
Sbjct: 194 ILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEK 253

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            G   D   +  +I+   K G  QE++K+ D M       +  +Y  L   + + G    
Sbjct: 254 CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLER 313

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A+  F  M + G  P    Y  ++ GF  S +++ A   F++M   G   DV+T+  MI+
Sbjct: 314 AEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G  +    ++A K F EM     +P V++YTT+I+G   + R  +A RI   M +    P
Sbjct: 374 GLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP 433

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           ++VTY  LL G C  G++ E  ++L E+ +    P +  ++  L+   C  G +    D 
Sbjct: 434 DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP-NLQLYSSLVNGLCDGGSVEKTLDD 492

Query: 325 LKAMIRLSIPT-EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           L    + +  T + G    +I   CK    D A ++  ++V +    +P      +A++Y
Sbjct: 493 LFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGC--KP------DATTY 544

Query: 384 NPMIQHLCHN--GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           N +I  LC +   +  +A      L K G L D V +  L  G  K G  D A ++++  
Sbjct: 545 NILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEA 604

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             RG   D  AY  L      +G+   A +    M+  G +P ++ +  ++  L +  ++
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKL 664

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS----GSVPNFDS 556
           + A +    M+ KG K  +     +++AL   G+V+EA  R + M+      GSV  +D+
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDA 724

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L+    +  K  AA+KL +  + R  +    +   + D L+ +GKT  A  +L ++   G
Sbjct: 725 LIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784

Query: 617 GVTDWKSSDKLIAGLNQ 633
                 +   ++ GL +
Sbjct: 785 SPPHAATFTAILDGLRK 801



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 151/658 (22%), Positives = 281/658 (42%), Gaps = 57/658 (8%)

Query: 5   AWTTR-LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
           +W+   ++N +  +  Q   + V  VL   K +  A+ FFRW      F HD  T+  ++
Sbjct: 67  SWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLM 126

Query: 64  EILGRVGKLNHARCILL--DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
            +L  V + N+++C  +  +M K G+  +   F +LI S+ +     ++V  F+IMK+  
Sbjct: 127 NLL--VAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKR 184

Query: 122 VERSVKSY------------------------------------DALFKLILRRGRYMMA 145
            +  + ++                                     A+ + +L+  R   A
Sbjct: 185 CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA 244

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
           +  F +M   G  P    YN M+ G   +   + A++  ++M ++      VTY  ++N 
Sbjct: 245 REVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNS 304

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +   ++ AE+LF  M      P  + YT++I G+    R  +A  +FDEM     +P+
Sbjct: 305 LCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPD 364

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            +T+T ++ GLC +G   +  K   EM+     P   +    + G+  K G +  A  ++
Sbjct: 365 VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS-KIGRVANAFRIM 423

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
           K MI      ++  Y  L++ FCK    D A +LLD+L       +  S+ +++   Y+ 
Sbjct: 424 KGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD------KCSSSPNLQL--YSS 475

Query: 386 MIQHLCHNGQTGKA--EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
           ++  LC  G   K   ++F +       LDP    ++I G  K G  D A  I + M   
Sbjct: 476 LVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535

Query: 444 GVPRDADAYICLIESYLRKGEP--ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           G   DA  Y  LI    R  E     A   L  + + G+ P +  +  +   L + G V 
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVD 595

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A ++++    +G   ++     +   L  +G V+ A+     M++ G  P+   +  ++
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           + L +  K   A K  D  +G+     +A+Y  ++ AL  AG    A+     ++ +G
Sbjct: 656 NGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARG 713



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 207/475 (43%), Gaps = 35/475 (7%)

Query: 174 SLKLE-TAIRFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           SLK+  TAI FF    +  G   DV TYN ++N     K   +   +  EM +  I P  
Sbjct: 95  SLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNT 154

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            S+  +I+ +    RADDA+  F+ MK    KP+  T+  L+  LC AG   +  +V  E
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHE 214

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M+     P D ++   ++    K+  +  A +V   M +   P +A  Y  +I+   KA 
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG 274

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
               A+K+LD ++ K  +  P         +Y  ++  LC  G   +AE  FR +   G 
Sbjct: 275 HAQEALKVLDNMLAKACV--PTEV------TYGILVNSLCKAGTLERAEELFRVMAASGF 326

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             + V + +LI G +K G    A  +   M   G   D   +  +I+   + G    A  
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
           + + M+  G  P    + ++++ L + GRV  A R+MK M+  G   +      +L+   
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG---KTI--------AAVKLLDF 576
             G ++EA   +D + +  S PN   + SL++ L + G   KT+        AA + LD 
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLD- 505

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
             G  C         ++  L   G+   A  I  +++ +G   D  + + LI GL
Sbjct: 506 -PGLCC--------SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 127/257 (49%), Gaps = 4/257 (1%)

Query: 23  HNLVYNVLHGAKNS--EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           +N++ N L  ++ +  E A      +E+ G +  D  T+  +   L ++G+++ A  +L 
Sbjct: 544 YNILINGLCRSRENRVERAFALLHDLEKVG-YLPDAVTYTPLCIGLCKIGEVDRAVKMLE 602

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +   +G   D   +  L      +G V  +V +F  M + G      +Y  +   +++  
Sbjct: 603 EASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVK 662

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG-ISLDVVTY 199
           +   A ++F++M+ +G +PT  TY  ++     +  ++ A   FE M +RG +   V+ Y
Sbjct: 663 KLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIY 722

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + +I+G+ +  K+D A KLF +M  +   PT ++  ++  G V   + + A  +  EM +
Sbjct: 723 DALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAA 782

Query: 260 FDVKPNAVTYTALLPGL 276
               P+A T+TA+L GL
Sbjct: 783 GGSPPHAATFTAILDGL 799


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 260/555 (46%), Gaps = 13/555 (2%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D  +F++LI SY +   + E    F I+++ G   S+ + ++L   +++ G   +A   +
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
           N++   GIE   +T N+M+       K++    F  DM+ +GI  D+VTYNT+IN Y R 
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
             + EA ++   M  K ++PT+ +Y  +I G     R   A  +F+EM S  + P+  TY
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
             LL   C     +E + +  +M+ R + P D   F  L+GV  ++GHL+ A    + M 
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSP-DLISFSSLIGVSSRNGHLDQALMYFRDMK 352

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
              +  +   Y ILI  +C+  M   A+++ DK++E+   L        +  +YN ++  
Sbjct: 353 TSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCAL--------DVVAYNTILNG 404

Query: 390 LCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC       A   F +++++GV+ D   F  LI GH KEGN   A  +  IM ++ +  D
Sbjct: 405 LCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPD 464

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  LI+ + +  E   A    + MI     P    +  ++      G V  A R+  
Sbjct: 465 IVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWD 524

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
            M+ KG+K  L     +++     G + +A   +  M+  G  P+   +++L++   +  
Sbjct: 525 EMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGE 584

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
               A  L++    +    D+ +Y  +L+     G+   A  IL K++E+G   D  +  
Sbjct: 585 YMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYT 644

Query: 626 KLIAGLNQEGNTKQA 640
            LI G   + N K+A
Sbjct: 645 TLINGYVSQDNLKEA 659



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 232/489 (47%), Gaps = 45/489 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+  L +  K++  +  L+DM +KG+  D   +  LI +Y ++G++ E+ ++ + M   G
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW-----GFFLSLK 176
           ++ ++ +Y+A+   + ++GRY+ AK  FN+MLS G+ P   TYN +L        FL  K
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310

Query: 177 ------------------------------LETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                                         L+ A+ +F DMK+ G+  D V Y  +INGY
Sbjct: 311 DIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGY 370

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R   M EA ++  +M E+     V++Y T++ G    +   DA  +FDEM    V P+ 
Sbjct: 371 CRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDF 430

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            T+T L+ G C  G M +   +   M ++ I P D   +  L+   CK+  +  A ++  
Sbjct: 431 CTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKP-DIVTYNILIDGFCKTTEMEKANELWN 489

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            MI   I      Y IL+  +C       A +L D+++ K I    + TL     + N +
Sbjct: 490 EMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGI----KPTL----VTCNTV 541

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I+  C +G   KA+ F  +++ +GV  D + +N LI G  K    D AF ++  M  +G+
Sbjct: 542 IKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGL 601

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  ++  + R+G   +A+  L  MIE G  P  S + +++        ++ A R
Sbjct: 602 QPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFR 661

Query: 506 VMKSMVEKG 514
               M+++G
Sbjct: 662 FHDEMLQRG 670



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 242/528 (45%), Gaps = 49/528 (9%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI-MKQLGVER 124
           L ++G ++ A  +  ++ + G++ +     +++ +  K   + + VK F I M+Q G+  
Sbjct: 160 LVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDD-VKPFLIDMEQKGIFA 218

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
            + +Y+ L     R G    A    N M  +G++PT  TYN ++ G     +   A   F
Sbjct: 219 DIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVF 278

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M S G+S D  TYNT++    R     EA+ +F++M  + + P +IS++++I      
Sbjct: 279 NEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRN 338

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV---------------- 288
              D AL  F +MK+  + P+ V YT L+ G C  G M E  ++                
Sbjct: 339 GHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAY 398

Query: 289 -------------------LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
                                EMVER + P D   F  L+   CK G++  A  +   M 
Sbjct: 399 NTILNGLCKKKLLADANALFDEMVERGVVP-DFCTFTTLIHGHCKEGNMGKALSLFGIMT 457

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           + +I  +   Y ILI+ FCK    ++A +L ++++ ++I   P         SY  ++  
Sbjct: 458 QKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIF--PNHI------SYAILVNG 509

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
            C+ G   +A   + ++++KG+    V  N +I+G+ + G+   A E +  M   GV  D
Sbjct: 510 YCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPD 569

Query: 449 ADAYICLIESYLRKGEPAD-AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +  Y  LI  ++ KGE  D A   ++ M   G  P    +  ++      GR+Q A  ++
Sbjct: 570 SITYNTLINGFV-KGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
           + M+E+G+  +      ++   + + +++EA    D M+Q G VP+ D
Sbjct: 629 RKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDD 676



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 45/232 (19%), Positives = 95/232 (40%), Gaps = 3/232 (1%)

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           +D + F+ LIR + +    +   +  KI+ R+G     +A   L+   ++ G    A   
Sbjct: 113 VDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEV 172

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            + +   G          ++ +L +D ++      +  M +KG+  ++     ++ A   
Sbjct: 173 YNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCR 232

Query: 532 RGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
            G + EA   ++ M   G  P    ++++++ L +KG+ + A  + +  L      D  +
Sbjct: 233 EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTT 292

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           Y  +L         L A  I   ++ +G   D  S   LI   ++ G+  QA
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQA 344


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 162/652 (24%), Positives = 301/652 (46%), Gaps = 32/652 (4%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFF--RWVERAGLFNHDRETHLKMIEILGRV 69
           N +R L+ + D  +V +VL+  + +    Q F          F H  ++   MI IL R 
Sbjct: 86  NSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRS 145

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI-----------------VQESVK 112
            +L  A+ ++L M +K      ++ E L+ +YG  G                  ++E  +
Sbjct: 146 RRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCE 205

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
            F ++K  G+  S+ + ++L   +++ G   +A   + +++  G++   +T N+M+    
Sbjct: 206 AFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALC 265

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
            + K+E    F  DM+ +G+  DVVTYNT+IN Y R   ++EA +L   M  K ++P V 
Sbjct: 266 KNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF 325

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y  +I G     +   A  + DEM    + P+  TY  LL   C    M++ +++  EM
Sbjct: 326 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 385

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
             + + P D   F  L+G+  K+G L+ A    + M    +  +   Y ILI  FC+  +
Sbjct: 386 PSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 444

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
              A+K+ D+++E+  +L        +  +YN ++  LC      +A+  F ++ ++GV 
Sbjct: 445 MSEALKVRDEMLEQGCVL--------DVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 496

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D   F  LI G+SK+GN + A  + ++M +R +  D   Y  LI+ + +  E       
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 556

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            + MI     P    +  ++      G V  A R+   MVEKG +  +     I++    
Sbjct: 557 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 616

Query: 532 RGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
            G+  +A   +  M+  G VP+   +++L++   ++     A  L++       + D+ +
Sbjct: 617 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 676

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           Y  +L+     G+   A  I+ K++E+G   D  +   LI G   + N K+A
Sbjct: 677 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 728



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 258/516 (50%), Gaps = 11/516 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A + ++ V R+G+  +    ++ MI  L +  K+ + +  L DM +KGV  D   +  LI
Sbjct: 238 AWEIYQEVVRSGVQVNVYTLNI-MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 296

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            +Y ++G+++E+ ++ D M   G++  V +Y+A+   + + G+Y+ AK   ++ML  G+ 
Sbjct: 297 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 356

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TYN++L     +  +  A R F++M S+G+  D+V+++ +I   ++   +D+A K 
Sbjct: 357 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 416

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F +MK   + P  + YT +I G+       +AL++ DEM       + VTY  +L GLC 
Sbjct: 417 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 476

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
              + E  ++  EM ER + P D   F  L+    K G++N A  + + MI+ ++  +  
Sbjct: 477 EKMLSEADELFTEMTERGVFP-DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 535

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI+ FCK    ++  +L + ++ + I   P         SY  +I   C+ G   +
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIY--PNHI------SYGILINGYCNMGCVSE 587

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A   + ++++KG     +  N +++G+ + GN   A E +  M  +G+  D   Y  LI 
Sbjct: 588 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 647

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
            ++++     A   ++ M   G  P    +  ++      GR+Q A  +M  M+E+GV  
Sbjct: 648 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 707

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +      ++   + + +++EA    D M+Q G VP+
Sbjct: 708 DRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/456 (22%), Positives = 207/456 (45%), Gaps = 14/456 (3%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + ++ ++  Y + +K+ E  + F  +K K +  ++ +  +++ G V V   D A  I+ E
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           +    V+ N  T   ++  LC   K+   +  L +M E+ + P D   +  L+   C+ G
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP-DVVTYNTLINAYCRQG 303

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L  A +++ +M    +      Y  +I   CK   Y RA  +LD++++  I + P    
Sbjct: 304 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK--IGMSP---- 357

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
             + ++YN ++   C N     AE  F ++  +GV+ D V+F+ LI   SK G  D A +
Sbjct: 358 --DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 415

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
             + M   G+  D   Y  LI  + R G  ++A    D M+E G       + +++  L 
Sbjct: 416 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC 475

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           ++  +  A  +   M E+GV  +      ++      G++ +A+   ++M+Q    P+  
Sbjct: 476 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 535

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            +++L+    +  +     +L +  + R    +  SY  +++     G    A+ +  ++
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 595

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           +EKG      + + ++ G  + GN  +AD  LS M+
Sbjct: 596 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 631



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 1/279 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L   K    A + F  +   G+F  D  T   +I    + G +N A  +   M
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGVF-PDFYTFTTLINGYSKDGNMNKAVTLFEMM 525

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ ++ D   +  LI+ + K   +++  ++++ M    +  +  SY  L       G  
Sbjct: 526 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 585

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R +++M+ +G E T  T N ++ G+  +     A  F  +M  +GI  D +TYNT+
Sbjct: 586 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 645

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING+ + + MD A  L  +M+   + P VI+Y  ++ G+    R  +A  I  +M    V
Sbjct: 646 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 705

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
            P+  TYT+L+ G      + E  +V  EM++R   P D
Sbjct: 706 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 258/516 (50%), Gaps = 11/516 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A + ++ V R+G+  +    ++ MI  L +  K+ + +  L DM +KGV  D   +  LI
Sbjct: 342 AWEIYQEVVRSGVQVNVYTLNI-MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 400

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            +Y ++G+++E+ ++ D M   G++  V +Y+A+   + + G+Y+ AK   ++ML  G+ 
Sbjct: 401 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 460

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TYN++L     +  +  A R F++M S+G+  D+V+++ +I   ++   +D+A K 
Sbjct: 461 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 520

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F +MK   + P  + YT +I G+       +AL++ DEM       + VTY  +L GLC 
Sbjct: 521 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCK 580

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
              + E  ++  EM ER + P D   F  L+    K G++N A  + + MI+ ++  +  
Sbjct: 581 EKMLSEADELFTEMTERGVFP-DFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVV 639

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI+ FCK    ++  +L + ++ + I   P         SY  +I   C+ G   +
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIY--PNHI------SYGILINGYCNMGCVSE 691

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A   + ++++KG     +  N +++G+ + GN   A E +  M  +G+  D   Y  LI 
Sbjct: 692 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 751

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
            ++++     A   ++ M   G  P    +  ++      GR+Q A  +M  M+E+GV  
Sbjct: 752 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 811

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +      ++   + + +++EA    D M+Q G VP+
Sbjct: 812 DRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 161/652 (24%), Positives = 299/652 (45%), Gaps = 32/652 (4%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFF--RWVERAGLFNHDRETHLKMIEILGRV 69
           N +R L+ + D  +V +VL+  + +    Q F          F H  ++   MI IL R 
Sbjct: 190 NSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRS 249

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI-----------------VQESVK 112
            +L  A+ ++L M +K      ++ E L+ +YG  G                  ++E  +
Sbjct: 250 RRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCE 309

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
            F ++K  G+  S+ + ++L   +++ G   +A   + +++  G++   +T N+M+    
Sbjct: 310 AFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALC 369

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
            + K+E    F  DM+ +G+  DVVTYNT+IN Y R   ++EA +L   M  K ++P V 
Sbjct: 370 KNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF 429

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y  +I G     +   A  + DEM    + P+  TY  LL   C    M++ +++  EM
Sbjct: 430 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 489

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
             + + P D   F  L+G+  K+G L+ A    + M    +  +   Y ILI  FC+  +
Sbjct: 490 PSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 548

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
              A+K+ D+++E+   L        +  +YN ++  LC      +A+  F ++ ++GV 
Sbjct: 549 MSEALKVRDEMLEQGCXL--------DVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 600

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D   F  LI G+ K+GN + A  + ++M +R +  D   Y  LI+ + +  E       
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 660

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            + MI     P    +  ++      G V  A R+   MVEKG +  +     I++    
Sbjct: 661 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 720

Query: 532 RGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
            G+  +A   +  M+  G VP+   +++L++   ++     A  L++       + D+ +
Sbjct: 721 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 780

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           Y  +L+     G+   A  I+ K++E+G   D  +   LI G   + N K+A
Sbjct: 781 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 832



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/456 (22%), Positives = 207/456 (45%), Gaps = 14/456 (3%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + ++ ++  Y + +K+ E  + F  +K K +  ++ +  +++ G V V   D A  I+ E
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           +    V+ N  T   ++  LC   K+   +  L +M E+ + P D   +  L+   C+ G
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP-DVVTYNTLINAYCRQG 407

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L  A +++ +M    +      Y  +I   CK   Y RA  +LD++++  I + P    
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK--IGMSP---- 461

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
             + ++YN ++   C N     AE  F ++  +GV+ D V+F+ LI   SK G  D A +
Sbjct: 462 --DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 519

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
             + M   G+  D   Y  LI  + R G  ++A    D M+E G       + +++  L 
Sbjct: 520 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLC 579

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           ++  +  A  +   M E+GV  +      ++      G++ +A+   ++M+Q    P+  
Sbjct: 580 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVV 639

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            +++L+    +  +     +L +  + R    +  SY  +++     G    A+ +  ++
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           +EKG      + + ++ G  + GN  +AD  LS M+
Sbjct: 700 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 735



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 1/279 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L   K    A + F  +   G+F  D  T   +I    + G +N A  +   M
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVF-PDFYTFTTLINGYXKDGNMNKAVTLFEMM 629

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ ++ D   +  LI+ + K   +++  ++++ M    +  +  SY  L       G  
Sbjct: 630 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 689

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R +++M+ +G E T  T N ++ G+  +     A  F  +M  +GI  D +TYNT+
Sbjct: 690 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 749

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING+ + + MD A  L  +M+   + P VI+Y  ++ G+    R  +A  I  +M    V
Sbjct: 750 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 809

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
            P+  TYT+L+ G      + E  +V  EM++R   P D
Sbjct: 810 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 158/619 (25%), Positives = 290/619 (46%), Gaps = 13/619 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N     L      + AL+  + +   GL   D  T+  +++   +  +   A+ I  
Sbjct: 277 FTYNAFIGGLCQTGAVDEALEVKKLMMEKGL-GPDGHTYTLLVDGFCKQKRSKEAKLIFE 335

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            MP  G+  +   +  LI+ + K+G ++E+++I D M   G++ +V +Y+A+   I + G
Sbjct: 336 SMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A   FN+ML  G+EP   TYN+++ G+  S  +  A     +MK+R ++    TY+
Sbjct: 396 EMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYS 455

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G      + +A ++  +M    ++P V  Y T+IK YV   R + A+ +   M + 
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN 515

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+   Y  L+ GLC A K+ E + +L +M E+ I P  ++ +   + +  KSG +  
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT-YGAFINLYSKSGEIQV 574

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A    K M+   I      Y ILI+  C       A+     ++EK +I  P    D+ A
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI--P----DIRA 628

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
             Y+ +I  L  NG+T +A   F + +K GV+ D   +N+LI G  KEG+ + A ++   
Sbjct: 629 --YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G+  +   Y  LI    + GE   A+   D + E    P    + ++++   + G 
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGN 746

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS--GSVPNFDSL 557
           +  A ++   M+ KG+  +  +   +++     G++E+AL       Q   GS+  F+SL
Sbjct: 747 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSL 806

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +    + GK I A +L D  + +    ++ +Y  ++DA   A     A  +   +  +  
Sbjct: 807 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 866

Query: 618 VTDWKSSDKLIAGLNQEGN 636
           + +  +   L+   NQ GN
Sbjct: 867 IPNTLTYTSLLLSYNQIGN 885



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 150/589 (25%), Positives = 271/589 (46%), Gaps = 47/589 (7%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+   +VG +   + +L +M K+  + +   +   I    + G V E++++ 
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVK 299

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            +M + G+     +Y  L     ++ R   AK  F  M S G+ P R TY  ++ GF   
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A+R  ++M +RG+ L+VVTYN MI G  +  +M +A  LF EM    +EP   +Y
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTY 419

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I GY+       A  +  EMK+  + P+  TY+ L+ GLC +  + +  +VL +M+ 
Sbjct: 420 NLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR 479

Query: 295 RYIPPKDNSVFM--KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
             + P   +VFM   L+    +      A ++LK MI   +  +   Y  LI   C+A+ 
Sbjct: 480 NGVKP---NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            + A  LL  + EK I  +P       A +Y   I     +G+   AE +F+ ++  G++
Sbjct: 537 VEEAKMLLVDMGEKGI--KPN------AHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            + V +  LI+GH   GN   A    K M  +G+  D  AY  +I S  + G+  +A   
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
               ++ G  P   L+ S++    ++G ++ AS++   M+  G+  N+ +          
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV---------- 698

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
                                 +++L++ L + G+   A +L D    +D + D+ +Y  
Sbjct: 699 ----------------------YNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYST 736

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++D    +G    A+ +  +++ KG   D      LI G  +EGN ++A
Sbjct: 737 IIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 785



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 241/502 (48%), Gaps = 19/502 (3%)

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            L R  K+  A+ +L+DM +KG++ +   +   I  Y K G +Q + + F  M   G+  +
Sbjct: 531  LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
               Y  L K     G  + A   F  ML +G+ P    Y+ ++     + K + A+  F 
Sbjct: 591  NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
                 G+  DV  YN++I+G+ +   +++A +L+ EM    I P ++ Y T+I G   + 
Sbjct: 651  KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLG 710

Query: 246  RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
                A  +FDE++  D+ P+ VTY+ ++ G C +G + E  K+  EM+ + I P D  ++
Sbjct: 711  EVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISP-DGYIY 769

Query: 306  MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
              L+    K G+L  A  +     + S+ + +  +  LI++FCK      A +L D +V+
Sbjct: 770  CILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA-FNSLIDSFCKHGKVIEARELFDDMVD 828

Query: 366  KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
            K+  L P         +Y  +I          +AE  F  +  + ++ + + + +L+  +
Sbjct: 829  KK--LTPNIV------TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 880

Query: 425  SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            ++ GN      + K M  RG+  DA AY  +  +Y ++G+  +A   L+  + +G     
Sbjct: 881  NQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLED 940

Query: 485  SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM----RGHVEEALG 540
             +F +++  L ++ ++ T   V++ + E G KE L L +K    LL+     G+ +EA  
Sbjct: 941  DVFDALIFHLCKEKQIST---VLELLSEMG-KEELSLSSKTCNTLLLGFYKSGNEDEASK 996

Query: 541  RIDLMMQSGSVPNFDSLLSVLS 562
             + +M + G VP   SL   +S
Sbjct: 997  VLGVMQRLGWVPTSLSLTDSIS 1018



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/561 (24%), Positives = 250/561 (44%), Gaps = 61/561 (10%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++ I+ +   G + E+  +F      G   ++   + L + +L+     +  + +  M
Sbjct: 174 VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSM 233

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIR---FFEDMKSRGISLDVVTYNTMINGYNRF 209
           +   I P  +TY  ++       K+   I+      +M+ +    ++ TYN  I G  + 
Sbjct: 234 VEAKIVPDVYTYTNVIKA---HCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQT 289

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
             +DEA ++   M EK + P   +YT ++ G+   +R+ +A  IF+ M S  + PN  TY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAM 328
           TAL+ G    G + E  ++  EM+ R +  K N V +  ++G   K+G +  A  +   M
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGL--KLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +   +  +   Y +LI+ + K+    +A +LL ++  +++   P         +Y+ +I 
Sbjct: 408 LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP--------FTYSVLIS 459

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LCH+    KA     Q+++ GV   V  +  LI+ + +E   + A E++KIM   GV  
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y CLI    R  +  +AK  L  M E G  P +  + + +    + G +Q A R  
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVE-----EALGRIDLMMQSGSVPNFDSLLSVLS 562
           K M+  G+  N      ++  +L++GH +     EAL     M++ G +P          
Sbjct: 580 KDMLSSGIVPN-----NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP---------- 624

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
                                 D+ +Y  ++ +L   GKT  A  +  K ++ G V D  
Sbjct: 625 ----------------------DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662

Query: 623 SSDKLIAGLNQEGNTKQADIL 643
             + LI+G  +EG+ ++A  L
Sbjct: 663 LYNSLISGFCKEGDIEKASQL 683



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/433 (22%), Positives = 185/433 (42%), Gaps = 81/433 (18%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVL----HGAKNSEHALQFFRWVERAGLFNHDR 56
           +AER +   L + I   VP   +N++Y +L        N+  AL  F+ +   GL   D 
Sbjct: 574 VAERYFKDMLSSGI---VP---NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI-PDI 626

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
             +  +I  L + GK   A  + L   K GV  D  ++  LI  + K+G ++++ +++D 
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAK------------------------------ 146
           M   G+  ++  Y+ L   + + G    A+                              
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGN 746

Query: 147 -----RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI-------------------- 181
                + F++M+S+GI P  + Y +++ G      LE A+                    
Sbjct: 747 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSL 806

Query: 182 --------------RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
                           F+DM  + ++ ++VTY  +I+ Y + + M+EAE+LF +M+ +NI
Sbjct: 807 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 866

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P  ++YT+++  Y  +      + +F +M++  +  +A+ Y  +    C  GK +E  K
Sbjct: 867 IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK 926

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +L + +   I  +D+ VF  L+   CK   ++   ++L  M +  +   +     L+  F
Sbjct: 927 LLNKSLVEGIKLEDD-VFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGF 985

Query: 348 CKAEMYDRAIKLL 360
            K+   D A K+L
Sbjct: 986 YKSGNEDEASKVL 998



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/302 (20%), Positives = 132/302 (43%), Gaps = 24/302 (7%)

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPP----------------KDNSVFMKLLGV 311
           +Y+ L   LC++G + +   +L ++++   PP                 + +VF   +  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
               G LN A+ V  A I             L+ +  KA M     K+   +VE +I+  
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIV-- 239

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           P      +  +Y  +I+  C  G   K ++   ++ K+   +   +N  I G  + G  D
Sbjct: 240 P------DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVD 293

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A E+ K+M  +G+  D   Y  L++ + ++    +AK   +SM   G +P    + +++
Sbjct: 294 EALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALI 353

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           +   ++G ++ A R+   M+ +G+K N+     ++  +   G + +A+   + M+ +G  
Sbjct: 354 DGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLE 413

Query: 552 PN 553
           P+
Sbjct: 414 PD 415



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 82/181 (45%)

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            T+  +I+  G+   +  A  + LDM  + +  +   +  L+ SY + G   + + +F  M
Sbjct: 837  TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 896

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            +  G+     +Y  +     + G+ + A +  NK L EGI+     ++ +++      ++
Sbjct: 897  EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 956

Query: 178  ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             T +    +M    +SL   T NT++ G+ +    DEA K+   M+     PT +S T  
Sbjct: 957  STVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDS 1016

Query: 238  I 238
            I
Sbjct: 1017 I 1017



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 134/333 (40%), Gaps = 19/333 (5%)

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY------ 383
           ++S P     Y IL    C + +  +A  +L+KL++      P   LD     Y      
Sbjct: 113 KMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTR--KPPLEILDSLVRCYREFGGS 170

Query: 384 -----NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIV 437
                +  I      G   +A   F   + +G     +  NNL+R   K       +++ 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M    +  D   Y  +I+++ + G+    K  L  M E    P    + + +  L + 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQT 289

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G V  A  V K M+EKG+  +      +++    +   +EA    + M  SG  PN   +
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            +L+    ++G    A+++ D  + R   +++ +Y  ++  +  AG+   A S+  +++ 
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 615 KGGVTDWKSSDKLIAG-LNQEGNTKQADILSRM 646
            G   D  + + LI G L      K  ++L+ M
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 271/590 (45%), Gaps = 49/590 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L +V +      ++ +M + G    E     L++   KKG +  +  + 
Sbjct: 284 DVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLV 343

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + +K+ GV  S+  Y+AL   + + G+   A+  FN M  +G+ P   TY++++  F   
Sbjct: 344 NKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKR 403

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL+ A+ F   M   GI   V  Y+++I+G+ +  K+  A+ LF EM    ++P V+ Y
Sbjct: 404 GKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIY 463

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           T++I GY       +A R++ EM    + PN  T+TAL+ GLC A +M E  K+  EMVE
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P + +                                    Y +LIE  CK     
Sbjct: 524 WNVIPNEVT------------------------------------YNVLIEGHCKEGNTV 547

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLD 413
           RA +LLD++VEK ++  P      +  +Y P+I  LC  G+  +A  F   L  ++  L+
Sbjct: 548 RAFELLDEMVEKGLV--P------DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + F+ L+ G+ KEG  D A +  + M  RGV  D   Y  LI   LR+ +       L 
Sbjct: 600 EMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLK 659

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M + G  P + L+ +++++  + G ++ A  +   MV +G   N+     ++  L   G
Sbjct: 660 QMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIG 719

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            +++A      M+ S S+PN   +   L  L+ +G    A++L D  L    + +  +Y 
Sbjct: 720 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYN 778

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            ++      G+   A  +L  +++ G   D  S   +I    + G+ K+A
Sbjct: 779 ILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 828



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/532 (24%), Positives = 249/532 (46%), Gaps = 41/532 (7%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  + + GKL+ A  +  +M  KG+  ++  + +LI+S+ K+G +  ++     M ++G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +V  Y +L     + G+   AK  F++M++ G++P    Y  ++ G+    +L  A 
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R + +M  +GIS +  T+  +I+G     +M EA KLF EM E N+ P  ++Y  +I+G+
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                   A  + DEM    + P+  TY  L+ GLC  G++ E ++ + ++ +      +
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL-QGEQQKLN 599

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  LL   CK G L+ A D  + M+   +  +   Y +LI    + +     I LL 
Sbjct: 600 EMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLK 659

Query: 362 KLVEKEIILRPQSTL---------------------DMEAS--------SYNPMIQHLCH 392
           ++ ++   LRP + L                     D+  S        +Y  +I  LC 
Sbjct: 660 QMHDQG--LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCK 717

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G   KAE+  R+++    L +   +   +   + EGN + A ++  ++   G   +   
Sbjct: 718 IGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVT 776

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI  + + G   +A   L +MI+ G SP    + +++      G ++ A ++ +SM+
Sbjct: 777 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML 836

Query: 512 EKGVKENLDLVAK--ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            +GV  N D VA   ++    + G + +A    D MM+ G  PN   ++SL+
Sbjct: 837 NRGV--NPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 145/652 (22%), Positives = 275/652 (42%), Gaps = 37/652 (5%)

Query: 2   AERAWTTRLQNKI--RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
             ++W   L N    + L P   H++   ++    +S  AL+FF ++     F+H   + 
Sbjct: 40  GNQSWRVALNNSFISQTLKP---HHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSF 96

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             +I  L +      A  +L  +  +G+   E +FE  ++SY K      +   FD++ Q
Sbjct: 97  CILIHALVQSNLYWPASSLLQTLLLRGLN-PEGLFESFLDSYRKCNF--STTLGFDLLIQ 153

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
             V+   +  D L  + L              M+  GI P   T + +L G     +   
Sbjct: 154 TYVQNR-RELDGLVVVRL--------------MMDCGILPQIRTLSGVLNGLIRIRQFRM 198

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+  F+++ S G+  DV  Y  ++      K    A ++   M+    + +V +Y   I+
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G    +R  +A+ I + +    ++ +  TY  L+ GLC   +    ++++ EM+E    P
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            + +V   + G++ K G++ +A D++  + +  +      Y  LI + CK    D A  L
Sbjct: 319 SEAAVSNLVDGLR-KKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFN 418
            + +  K +   P         +Y+ +I   C  G+   A  F  ++ + G+   V  ++
Sbjct: 378 FNNMGHKGLF--PNDV------TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYS 429

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           +LI GH K G   +A  +   M   G+  +   Y  LI  Y ++GE  +A      M   
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G SP +  F +++  L    R+  A+++   MVE  V  N      ++E     G+   A
Sbjct: 490 GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
              +D M++ G VP+   +  L+S L   G+   A + ++   G    ++   +  +L  
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHG 609

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG-LNQEGNTKQADILSRM 646
               G+  +A     +++ +G   D      LI G L Q+      D+L +M
Sbjct: 610 YCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQM 661



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 198/438 (45%), Gaps = 17/438 (3%)

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M +  I P + + + ++ G + + +   AL +FDE+ S  ++P+   YTA++  LC+   
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 282 MVEVQKVLREMVERY--IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
            +  ++V+  M      +     +VF++ L   CK+  +  A ++   +    +  + G 
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGL---CKNQRVWEAVEIKNLLSYKGLRADVGT 287

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  L+   CK E ++   +++++++E   +  P      EA+  N ++  L   G  G A
Sbjct: 288 YCTLVLGLCKVEEFEAGEEMMNEMIEFGFV--PS-----EAAVSN-LVDGLRKKGNIGSA 339

Query: 400 EIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                ++ K GV   +  +N LI    K+G  D A  +   MG +G+  +   Y  LI+S
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           + ++G+   A   L  M E G       + S++    + G+++ A  +   M+  G+K N
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           + +   ++      G +  A      M   G  PN   F +L+S L    +   A KL  
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFG 519

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             +  + I +  +Y  +++     G T+ A+ +L +++EKG V D  +   LI+GL   G
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTG 579

Query: 636 NTKQADILSRMIRGEMSR 653
              +A      ++GE  +
Sbjct: 580 RVSEAREFMNDLQGEQQK 597



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 123/246 (50%), Gaps = 2/246 (0%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  M  +G++ D  ++  +I++  K G ++ +  ++DIM   G   +V +Y AL   + 
Sbjct: 657 LLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLC 716

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G    A+    +ML+    P ++TY   L        +E AI+   D+   G   + V
Sbjct: 717 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTV 775

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN +I G+ +  ++ EA ++   M +  I P  ISY+T+I  Y       +A+++++ M
Sbjct: 776 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 835

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            +  V P+ V Y  L+ G C  G++ +  ++  +M+ R + P + + +  L+   C    
Sbjct: 836 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKP-NRATYNSLIHGTCLMSS 894

Query: 318 LNAAAD 323
           +++ AD
Sbjct: 895 VSSTAD 900


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 258/516 (50%), Gaps = 11/516 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A + ++ V R+G+  +    ++ MI  L +  K+ + +  L DM +KGV  D   +  LI
Sbjct: 81  AWEIYQEVVRSGVQVNVYTLNI-MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 139

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            +Y ++G+++E+ ++ D M   G++  V +Y+A+   + + G+Y+ AK   ++ML  G+ 
Sbjct: 140 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 199

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TYN++L     +  +  A R F++M S+G+  D+V+++ +I   ++   +D+A K 
Sbjct: 200 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 259

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F +MK   + P  + YT +I G+       +AL++ DEM       + VTY  +L GLC 
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 319

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
              + E  ++  EM ER + P D   F  L+    K G++N A  + + MI+ ++  +  
Sbjct: 320 EKMLSEADELFTEMTERGVFP-DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 378

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI+ FCK    ++  +L + ++ + I   P         SY  +I   C+ G   +
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRI--YPNHI------SYGILINGYCNMGCVSE 430

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A   + ++++KG     +  N +++G+ + GN   A E +  M  +G+  D   Y  LI 
Sbjct: 431 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 490

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
            ++++     A   ++ M   G  P    +  ++      GR+Q A  +M  M+E+GV  
Sbjct: 491 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 550

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +      ++   + + +++EA    D M+Q G VP+
Sbjct: 551 DRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/552 (25%), Positives = 265/552 (48%), Gaps = 13/552 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++L+ +Y +   ++E  + F ++K  G+  S+ + ++L   +++ G   +A   + ++
Sbjct: 29  VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G++   +T N+M+     + K+E    F  DM+ +G+  DVVTYNT+IN Y R   +
Sbjct: 89  VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 148

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +EA +L   M  K ++P V +Y  +I G     +   A  + DEM    + P+  TY  L
Sbjct: 149 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 208

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           L   C    M++ +++  EM  + + P D   F  L+G+  K+G L+ A    + M    
Sbjct: 209 LVECCRNDNMMDAERIFDEMPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   Y ILI  FC+  +   A+K+ D+++E+  +L        +  +YN ++  LC 
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL--------DVVTYNTILNGLCK 319

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                +A+  F ++ ++GV  D   F  LI G+SK+GN + A  + ++M +R +  D   
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 379

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+ + +  E        + MI     P    +  ++      G V  A R+   MV
Sbjct: 380 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 439

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           EKG +  +     I++     G+  +A   +  M+  G VP+   +++L++   ++    
Sbjct: 440 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 499

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A  L++       + D+ +Y  +L+     G+   A  I+ K++E+G   D  +   LI
Sbjct: 500 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559

Query: 629 AGLNQEGNTKQA 640
            G   + N K+A
Sbjct: 560 NGHVTQNNLKEA 571



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 102/456 (22%), Positives = 207/456 (45%), Gaps = 14/456 (3%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + ++ ++  Y + +K+ E  + F  +K K +  ++ +  +++ G V V   D A  I+ E
Sbjct: 28  LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           +    V+ N  T   ++  LC   K+   +  L +M E+ + P D   +  L+   C+ G
Sbjct: 88  VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP-DVVTYNTLINAYCRQG 146

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L  A +++ +M    +      Y  +I   CK   Y RA  +LD++++  I + P    
Sbjct: 147 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK--IGMSP---- 200

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
             + ++YN ++   C N     AE  F ++  +GV+ D V+F+ LI   SK G  D A +
Sbjct: 201 --DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 258

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
             + M   G+  D   Y  LI  + R G  ++A    D M+E G       + +++  L 
Sbjct: 259 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC 318

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           ++  +  A  +   M E+GV  +      ++      G++ +A+   ++M+Q    P+  
Sbjct: 319 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 378

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            +++L+    +  +     +L +  + R    +  SY  +++     G    A+ +  ++
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 438

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           +EKG      + + ++ G  + GN  +AD  LS M+
Sbjct: 439 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 474



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 1/279 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L   K    A + F  +   G+F  D  T   +I    + G +N A  +   M
Sbjct: 310 YNTILNGLCKEKMLSEADELFTEMTERGVF-PDFYTFTTLINGYSKDGNMNKAVTLFEMM 368

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ ++ D   +  LI+ + K   +++  ++++ M    +  +  SY  L       G  
Sbjct: 369 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 428

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R +++M+ +G E T  T N ++ G+  +     A  F  +M  +GI  D +TYNT+
Sbjct: 429 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 488

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING+ + + MD A  L  +M+   + P VI+Y  ++ G+    R  +A  I  +M    V
Sbjct: 489 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 548

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
            P+  TYT+L+ G      + E  +V  EM++R   P D
Sbjct: 549 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 154/617 (24%), Positives = 276/617 (44%), Gaps = 17/617 (2%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           ++ + L  A   E A + F  +   G    DR  H  M+  L +  ++  AR +   M K
Sbjct: 194 ILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEK 253

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            G   D   +  +I+   K G  QE++K+ D M       +  +Y  L   + + G    
Sbjct: 254 CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLER 313

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A+  F  M + G  P    Y  ++ GF  S +++ A   F++M   G   DV+T+  MI+
Sbjct: 314 AEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G  +    ++A K F EM     +P V++YTT+I+G   + R  +A RI   M +    P
Sbjct: 374 GLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP 433

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL-NAAAD 323
           ++VTY  LL G C  G++ E  ++L E+ +    P +  ++  L+   C  G + N   D
Sbjct: 434 DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP-NLQLYSSLVKGLCDGGSVENTLDD 492

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + +     +   + G    +I   CK    D A ++  ++V +    +P      +A++Y
Sbjct: 493 LFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGC--KP------DATTY 544

Query: 384 NPMIQHLCHN--GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           N +I  LC +   +  +A      L   G L D V +  L  G  K G  D A ++++  
Sbjct: 545 NILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEA 604

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             RG   D  AY  L      +G+   A +    M+  G +P ++ +  ++  L +  ++
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKL 664

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS----GSVPNFDS 556
           + A +    M+ KG K  +     +++AL   G+V+EA  R + M+      GSV  +D+
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDA 724

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L+    +  K  AA+KL +  + R  +    +   + D L+ +GKT  A  +L ++   G
Sbjct: 725 LIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784

Query: 617 GVTDWKSSDKLIAGLNQ 633
                 +   ++ GL +
Sbjct: 785 SPPHAATFTAILDGLRK 801



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 205/475 (43%), Gaps = 35/475 (7%)

Query: 174 SLKLE-TAIRFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           SLK+  TAI FF    +  G   DV TYN ++N     K   +   +  EM +  I P  
Sbjct: 95  SLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNT 154

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            S+  +I+ +    RADDA+  F+ MK    KP+  T+  L+  LC AG   +  +V  E
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHE 214

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M+     P D ++   ++    K+  +  A +V   M +   P +A  Y  +I+   KA 
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG 274

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
               A+K+LD ++ K  +  P         +Y  ++  LC  G   +AE  FR +   G 
Sbjct: 275 HAQEALKVLDNMLAKACV--PTEV------TYGILVNSLCKAGTLERAEELFRVMAASGF 326

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             + V + +LI G +K G    A  +   M   G   D   +  +I+   + G    A  
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
           + + M+  G  P    + ++++ L + GRV  A R+MK M+  G   +      +L+   
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG-----------KTIAAVKLLDF 576
             G ++EA   +D + +  S PN   + SL+  L + G           ++ AA + LD 
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLD- 505

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
             G  C         ++  L   G+   A  I  +++ +G   D  + + LI GL
Sbjct: 506 -PGLCC--------SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 166/612 (27%), Positives = 282/612 (46%), Gaps = 37/612 (6%)

Query: 45  WVERAGLFNH----DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
           W    G+  H    D  T+  MI    +VG +  A+ +LL+M +K    DE +   L  S
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAI--ELKRS 266

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
              KG+V +                + +YD L        R   AK    +M+  G++P 
Sbjct: 267 MVDKGLVPD----------------LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 310

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
             TYN ++ GF     +E A R  ++M + GI  +++ +NT++NG  +  KM++A ++  
Sbjct: 311 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 370

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           EM EK +EP   +Y+ +I+G+   +    A  + DEMK   + P  +TY+ ++ GLC  G
Sbjct: 371 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 430

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            +     +LREMV   + P +  V+  L+    K G +  +  +L+ M    I  +   Y
Sbjct: 431 NLQGTNAILREMVMNGLKP-NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCY 489

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             LI  FCKA+  + A   L +++E+   LRP       A +Y   I      G+   A+
Sbjct: 490 NSLIIGFCKAKRMEEARTYLMEMLERR--LRPN------AHTYGAFIDGYSKAGEMEIAD 541

Query: 401 IFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
            +F +++  GVL  V  +  LI GH KEGN   AF + + +  R V +D   Y  LI   
Sbjct: 542 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 601

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            R G+  +A      + E G  P +  + S++    + G V  AS++++ M  KG+  ++
Sbjct: 602 SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDI 661

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                +++ L   G +E A    D +   G  PN   + +++    +     AA +LL+ 
Sbjct: 662 VTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 721

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
            L R    D   Y  +L+      K   A  +  +++EKG  +   S + LI G  + G 
Sbjct: 722 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGK 780

Query: 637 TKQAD-ILSRMI 647
            ++A+ +L  MI
Sbjct: 781 LQEANHLLEEMI 792



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/572 (23%), Positives = 270/572 (47%), Gaps = 12/572 (2%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A+ +LL+M   G++ +   +  LI+ + ++G ++++ +I D M   G+E ++  ++ L  
Sbjct: 295 AKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN 354

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + + G+   A     +M+ +G+EP   TY++++ G      +  A    ++MK R ++ 
Sbjct: 355 GVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 414

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            V+TY+ +ING  R   +     +  EM    ++P  + YTT++  +    R +++  I 
Sbjct: 415 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 474

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           + M+   + P+   Y +L+ G C A +M E +  L EM+ER + P  ++    + G   K
Sbjct: 475 ERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYS-K 533

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           +G +  A      M+   +    G Y  LIE  CK      A  +   ++ + ++     
Sbjct: 534 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL----- 588

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
               +  +Y+ +I  L  NG+  +A   F +L +KG+L +   +N+LI G  K+GN D A
Sbjct: 589 ---QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 645

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            ++++ M  +G+  D   Y  LI+   + GE   AK   D +   G +P    + ++++ 
Sbjct: 646 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 705

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--SV 551
             +      A ++++ M+ +GV  +  +   IL         E+AL     M++ G  S 
Sbjct: 706 YCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST 765

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
            +F++L+    + GK   A  LL+  + +  I +  +Y  ++D    AG    A  +  +
Sbjct: 766 VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLE 825

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           + E+  +   K+   L+ G +  GN  +   L
Sbjct: 826 MQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 857



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 259/554 (46%), Gaps = 16/554 (2%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + GK+  A  I+ +M +KGV+ D   + +LIE + +   +  + ++ D MK+  +  +V 
Sbjct: 358 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 417

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y  +   + R G          +M+  G++P    Y  ++       ++E +    E M
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 477

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           + +GI  DV  YN++I G+ + K+M+EA     EM E+ + P   +Y   I GY      
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           + A R F+EM S  V PN   YTAL+ G C  G + E   V R ++ R +  +D   +  
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV-LQDVQTYSV 596

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+    ++G ++ A  +   +    +   A  Y  LI   CK    D+A +LL+++  K 
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
           I        + +  +YN +I  LC  G+  +A+  F  +  +G+  + V +  ++ G+ K
Sbjct: 657 I--------NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCK 708

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
             NP +AF++++ M  RGVP DA  Y  ++    ++ +   A      M+E G +   S 
Sbjct: 709 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS- 767

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F +++E   + G++Q A+ +++ M+EK    N      +++     G + EA  R+ L M
Sbjct: 768 FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEA-KRLWLEM 826

Query: 547 QSGSV----PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           Q  +V      + SLL      G       L +  + +    D  +Y  ++DA    G  
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 886

Query: 603 LNAYSILFKIMEKG 616
           + A  +  +I+ KG
Sbjct: 887 MEACKLKDEILVKG 900



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 234/492 (47%), Gaps = 9/492 (1%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L R G L     IL +M   G++ +  ++  L+ ++ K+G V+ES  I + M
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 477

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ++ G+   V  Y++L     +  R   A+ Y  +ML   + P  HTY   + G+  + ++
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A R+F +M S G+  +V  Y  +I G+ +   + EA  +F  +  + +   V +Y+ +
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 597

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G     +  +A  IF E++   + PNA TY +L+ G C  G + +  ++L EM  + I
Sbjct: 598 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 657

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  L+   CK+G +  A ++   +    +      Y  +++ +CK++    A 
Sbjct: 658 NP-DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 716

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           +LL+     E++LR    +  +A  YN ++   C   +  KA   F+++++KG    V+F
Sbjct: 717 QLLE-----EMLLR---GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSF 768

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI G+ K G    A  +++ M  +    +   Y  LI+   + G   +AK     M E
Sbjct: 769 NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE 828

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
               P +  + S++      G +   S + + MV KG++ +      +++A    G+V E
Sbjct: 829 RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 888

Query: 538 ALGRIDLMMQSG 549
           A    D ++  G
Sbjct: 889 ACKLKDEILVKG 900



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 126/569 (22%), Positives = 244/569 (42%), Gaps = 94/569 (16%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++L++SY K G + E+V +F   K      S+ S ++L   +L+  +  +  + F+ M
Sbjct: 156 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGM 215

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            +  + P                                   DV TY  MI+ + +   +
Sbjct: 216 CAHKVLP-----------------------------------DVYTYTNMISAHCKVGNV 240

Query: 213 DEAEKLFAEMKE-----------------KNIEPTVISYTTMIKGYVAVERADDALRIFD 255
            +A+++  EM E                 K + P + +Y  +I G+   +R+ +A  +  
Sbjct: 241 KDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLL 300

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM    +KP  +TY AL+ G    G + +  ++  EMV   I   +  ++  LL   CK+
Sbjct: 301 EMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGI-EANLIIWNTLLNGVCKA 359

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G +  A ++++ M+   +  ++  Y +LIE  C+ +   RA +LLD++ +++  L P   
Sbjct: 360 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK--LAPT-- 415

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
                 +Y+ +I  LC  G         R+++  G+  + V +  L+  H+KEG  + + 
Sbjct: 416 ----VLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 471

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            I++ M  +G+  D   Y  LI  + +     +A+T L  M+E    P +  + + ++  
Sbjct: 472 MILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGY 531

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF 554
            + G ++ A R    M+  GV  N+ +   ++E     GH +E                 
Sbjct: 532 SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE-----GHCKE----------------- 569

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
                     G    A  +  F L R  + D+ +Y  ++  L   GK   A+ I  ++ E
Sbjct: 570 ----------GNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE 619

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           KG + +  + + LI+G  ++GN  +A  L
Sbjct: 620 KGLLPNAFTYNSLISGSCKQGNVDKASQL 648



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 169/340 (49%), Gaps = 14/340 (4%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + L+P  F +N + +      N + A Q    +   G+ N D  T+  +I+ L + G++ 
Sbjct: 620 KGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI-NPDIVTYNILIDGLCKAGEIE 678

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A+ +  D+  +G+  +   +  +++ Y K      + ++ + M   GV      Y+ + 
Sbjct: 679 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 738

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
               +  ++  A   F +ML +G   T  ++N ++ G+  S KL+ A    E+M  +   
Sbjct: 739 NFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 797

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            + VTY ++I+   +   M EA++L+ EM+E+N+ PT  +YT+++ GY  +    +   +
Sbjct: 798 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 857

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN--------SVF 305
           F+EM +  ++P+ +TY  ++   C  G ++E  K+  E++ + +P K          SV 
Sbjct: 858 FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVI 917

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            +  G Q  +G+++ AA+VL++M++    +     G L++
Sbjct: 918 AR--GFQI-AGNMDEAAEVLRSMVKFGWVSNTTSLGDLVD 954


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 152/650 (23%), Positives = 302/650 (46%), Gaps = 40/650 (6%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           +W  + + ++R L+     + V  VL    +   AL+FF W +R   + HD   +  M+E
Sbjct: 156 SWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLE 215

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           +L +      +R +L+ M ++G+    + F  ++ SY + G +++++K+  +M++ GVE 
Sbjct: 216 VLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEP 275

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           ++   +    + +R  R   A R+  +M   GI P   TYN M+ G+    ++E AI   
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVA 243
           EDM S+G   D V+Y T++    + K++ E   L  +M KE  + P  ++Y T+I     
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
            + AD+AL    + +    + + + Y+A++  LC  G+M E + ++ EM+ +   P D  
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA-------EMYD-- 354
            +  ++   C+ G ++ A  +L+ M           Y  L+   C+        EM +  
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 515

Query: 355 ----------------RAIKLLDKLVE-----KEIILRPQSTLDMEASSYNPMIQHLCHN 393
                             ++   KL E     +E++L+      +E    N ++Q LC +
Sbjct: 516 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI---NLLLQSLCRD 572

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+T +A  F  + + KG  ++ V F  +I G  +    D+A  ++  M       D   Y
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L+++  +KG  A+A   +  M+  G  P    +R+V+    + G+V     +++ M+ 
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692

Query: 513 KGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA 569
           +  ++   +  +++E L + G +EEA   LG++             +L+    +KG  ++
Sbjct: 693 R--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLS 750

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           A K+      R+ I D+   EK+   L+  GK   A  ++ +++E+G ++
Sbjct: 751 AYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHIS 800


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 150/625 (24%), Positives = 286/625 (45%), Gaps = 22/625 (3%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q    +V  VL    +   AL FF W E    + H+      ++ +L +  + + A    
Sbjct: 90  QLSPEIVGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAH--- 146

Query: 80  LDMPKKGV--QWDED--MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
            D+ +  +  QW  D   +  LI  + + G +  + ++FD M + G++     + ++ + 
Sbjct: 147 -DLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRG 205

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           +   G+   A  +F +M S+   P   TYN M+ G   S +L+ AIR  E+M   G + +
Sbjct: 206 LCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPN 264

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           V +YNT+++G+ +  +++ A  L  +M  +   P V+SYTT+I G   +++ D+A R+ D
Sbjct: 265 VFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMD 324

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           +M     +PN +TY  L+ G C  G +    +++R+M ER   P +   +  ++ V C+ 
Sbjct: 325 KMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP-NAITYNNIMHVFCRR 383

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
             +  A  VL+ MI+   P +A +Y  +I  FCKA     A  LL++++ +    RP   
Sbjct: 384 NDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGC--RP--- 438

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFR-QLMKKGVLDPVAFNNLIRGHSKEGNPDSAF 434
              + +  + +I  LC       A+   R  +      D VA++ LI    K      A 
Sbjct: 439 ---DVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAE 495

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
             + +M +     D   Y  +++   +     DA    D M   G  P    +  V+ S 
Sbjct: 496 SWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSF 555

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            +D  + +A ++++ M E     ++   + ++  L   G V++A      M+  G  PN 
Sbjct: 556 CKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNL 615

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             +++L+  L +  K   A ++L+    + C  D  +Y  +++ L  A +   A+ +L +
Sbjct: 616 VTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLRE 675

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGN 636
           + +KG + D  +   L+  L +  N
Sbjct: 676 MKDKGCLPDRMTYGTLLRALQKTNN 700



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 153/604 (25%), Positives = 278/604 (46%), Gaps = 24/604 (3%)

Query: 24   NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
             +V  VL G +N + AL FF W      +NHD  T   +++ L R+ +   A    L + 
Sbjct: 812  TVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDA----LQVY 867

Query: 84   KKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
            +  +    +M  F +LI    + G +  + ++   M + GV ++V  ++ + K +    +
Sbjct: 868  RNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARK 927

Query: 142  YMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A   F +M   G   P   TY+ ++     S K++ A R  EDM S+G S +VVTY+
Sbjct: 928  LDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYS 987

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            ++++G  +  K+DEA  L   M      P +++Y T+I G+  + R D+A  + +EM   
Sbjct: 988  SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 1047

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLN 319
              +PN VTYT LL   C  GK  +   ++  MVE+ Y+P  +   +  LL + CK   + 
Sbjct: 1048 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP--NLFTYNSLLDMFCKKDEVE 1105

Query: 320  AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
             A  +L +MI+         Y  +I   CKA      + LL++++    +         +
Sbjct: 1106 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV--------PD 1157

Query: 380  ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
              ++N +I  +C   +   A   F  + + G   + V +N+L+ G  K    D A  +++
Sbjct: 1158 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 1217

Query: 439  IMGRR-GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M R+ G   D   Y  +I+   +      A      M+ DG +P    +  V+ SL + 
Sbjct: 1218 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 1277

Query: 498  GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
              +  A+ V++ M++ G          +++     G++++AL  + L++  GS P+   F
Sbjct: 1278 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 1337

Query: 555  DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
               +  LS++G+   A +LL+  L    + D  +Y  +L     A  T +A   LF++M 
Sbjct: 1338 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVD-LFEVMR 1396

Query: 615  KGGV 618
            + G 
Sbjct: 1397 QCGC 1400



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 157/610 (25%), Positives = 272/610 (44%), Gaps = 20/610 (3%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F  N + NVL  A     A   FR     G +  D  T+  +I    R GK+  A  +  
Sbjct: 127 FCCNCLLNVLVKAHQYSQAHDLFR-SRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFD 185

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M +KG++    + + ++      G   ++V  F  M +     SV +Y+ +   + +  
Sbjct: 186 EMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSV-TYNTMINGLSKSD 244

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A R   +M+  G  P   +YN +L GF  + ++E A+   E M +RG   DVV+Y 
Sbjct: 245 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYT 304

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+ING  +  ++DEA ++  +M ++  +P VI+Y T++ G+  V   D A+ +  +M   
Sbjct: 305 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 364

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             +PNA+TY  ++   C    M    +VL+ M++   PP D   +  ++   CK+G L  
Sbjct: 365 GYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPP-DAINYSTIISGFCKAGKLRE 423

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM-- 378
           A D+L+ MIR     +      LI+  CKA   D A +L          LR    +D   
Sbjct: 424 AHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQEL----------LRMSIGMDCAP 473

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           +  +Y+ +I  LC   +  +AE +   ++K +   D V +N+++ G  K    + AF + 
Sbjct: 474 DVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLF 533

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M   GV  D   Y  +I S+ +      A   L+ M E    P    + +++  L + 
Sbjct: 534 DRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKA 593

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G V  A  V + M+  G   NL     +++ L     VE+A   +++M +    P+   +
Sbjct: 594 GTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITY 653

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
             L++ L    +   A ++L     + C+ D  +Y  +L AL      L     L K ME
Sbjct: 654 TCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKT-NNLELVEQLLKEME 712

Query: 615 KGGVTDWKSS 624
                 W ++
Sbjct: 713 ATEEGQWNAN 722



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 144/580 (24%), Positives = 251/580 (43%), Gaps = 47/580 (8%)

Query: 10   LQNKIRALVPQ--FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILG 67
            L+   R  VPQ    HN+V   L  A+  + AL+ F+ +E +G    D  T+  +++ L 
Sbjct: 900  LKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLV 959

Query: 68   RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
            + GK++ A  ++ DM  KG   +   +  L+    K G + E+  +   M + G   ++ 
Sbjct: 960  KSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIV 1019

Query: 128  SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE-- 185
            +Y+ +     + GR   A     +M+  G +P   TY V+L  F    K E AI   E  
Sbjct: 1020 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 1079

Query: 186  ---------------------------------DMKSRGISLDVVTYNTMINGYNRFKKM 212
                                              M  +G   +VV+YNT+I G  +  K+
Sbjct: 1080 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 1139

Query: 213  DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
             E   L  +M   N  P ++++ T+I       R D A  +F+ ++     PN VTY +L
Sbjct: 1140 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 1199

Query: 273  LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
            + GLC + +  + + +LREM  +     D   +  ++   CKS  ++ A  +   M+   
Sbjct: 1200 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 1259

Query: 333  IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
            +  +   Y I+I + CK    D A  +L      E++L+  +  D  A +Y  +I   C 
Sbjct: 1260 LAPDDVTYSIVISSLCKWRFMDEANNVL------ELMLK--NGFDPGAITYGTLIDGFCK 1311

Query: 393  NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             G   KA    + L+ KG   D V F+  I   SK G    A E+++ M R G+  D   
Sbjct: 1312 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 1371

Query: 452  YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT-ASRVMKSM 510
            Y  L++ +       DA    + M + G  P ++ + +++  L +    +   + V KSM
Sbjct: 1372 YNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSM 1431

Query: 511  VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
            V+ G K N +L +K+  ++ +   V      +D+  + GS
Sbjct: 1432 VDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGS 1471



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 199/441 (45%), Gaps = 23/441 (5%)

Query: 221  EMKEKNIEPTVISYTTMIKGYV--AVERADDALRIFDEMKSFDVKPNAVTYTA--LLPGL 276
            E  E  +E      TT + G V   V   D AL  FD   S +   N  TYT   LL  L
Sbjct: 796  EYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQE-GYNHDTYTCNCLLQAL 854

Query: 277  CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
                +  +  +V R    +     +   F  L+   C++G +  A ++LK M R  +P  
Sbjct: 855  LRLKRPKDALQVYRN---KLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQN 911

Query: 337  AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
               + ++I+  C A   D A++L  ++ E         +   +  +Y+ ++  L  +G+ 
Sbjct: 912  VILHNVVIKGLCSARKLDSALELFKEMEES-------GSCPPDVFTYSTIVDSLVKSGKV 964

Query: 397  GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
              A      ++ KG   + V +++L+ G  K G  D A  +++ M R G   +   Y  +
Sbjct: 965  DDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 1024

Query: 456  IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            I+ + + G   +A   L+ M++ G  P    +  ++++  + G+ + A  +++ MVEKG 
Sbjct: 1025 IDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 1084

Query: 516  KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
              NL     +L+    +  VE A   +  M+Q G VPN   ++++++ L +  K    V 
Sbjct: 1085 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 1144

Query: 573  LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
            LL+  L  +C+ D+ ++  ++DA+    +   AY +   I E G   +  + + L+ GL 
Sbjct: 1145 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 1204

Query: 633  QEGNTKQADILSRMIRGEMSR 653
            +     QA+ L R    EM+R
Sbjct: 1205 KSRRFDQAEYLLR----EMTR 1221



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 106/485 (21%), Positives = 210/485 (43%), Gaps = 17/485 (3%)

Query: 178  ETAIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
            + A+ FF+   S+ G + D  T N ++    R K+  +A +++    +    P + ++T 
Sbjct: 825  DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTI 882

Query: 237  MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
            +I G         A  +  EM    V  N + +  ++ GLC A K+    ++ +EM E  
Sbjct: 883  LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942

Query: 297  IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
              P D   +  ++    KSG ++ A  +++ M+          Y  L+   CKA   D A
Sbjct: 943  SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002

Query: 357  IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
              LL ++         +S       +YN +I   C  G+  +A     +++  G   + V
Sbjct: 1003 TALLQRMT--------RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054

Query: 416  AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
             +  L+    K G  + A  +V++M  +G   +   Y  L++ + +K E   A   L SM
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 476  IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            I+ G  P    + +V+  L +  +V     +++ M+      ++     I++A+     V
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 536  EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL-DFCLGRDCIIDLASYEK 591
            + A    +L+ +SG  PN   ++SL+  L +  +   A  LL +    + C  D+ +Y  
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234

Query: 592  VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGE 650
            V+D L  + +   AY +  +++  G   D  +   +I+ L +     +A ++L  M++  
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294

Query: 651  MSRGS 655
               G+
Sbjct: 1295 FDPGA 1299



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 86/399 (21%), Positives = 158/399 (39%), Gaps = 80/399 (20%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N V + L  +K  + A + F  +   GL   D  T+  +I  L +   ++ A  +L  M
Sbjct: 1232 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD-VTYSIVISSLCKWRFMDEANNVLELM 1290

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K G       +  LI+ + K G + ++++I  ++   G    V ++      + +RGR 
Sbjct: 1291 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 1350

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A      ML  G+ P   TYN +L GF  +   E A+  FE M+  G   D  TY T+
Sbjct: 1351 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL 1410

Query: 203  ----------------------------------------------------INGYNRFK 210
                                                                ++ + +  
Sbjct: 1411 VGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCG 1470

Query: 211  KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
               +A K+F  M ++N    V+ ++ M+  YV  ++ + A  ++  M    V+P+AVT+ 
Sbjct: 1471 SPQDARKVFEGMDQRN----VVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFL 1526

Query: 271  ALLPGLCDAGKMVEVQKVLREMVERYI---------PPKDN-SVFMKLLGVQCKSGHLNA 320
            +LL   C AG       +L   V+ ++         P  D+ S  + LLG   + G +N 
Sbjct: 1527 SLLTMCCHAG-------LLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLG---RLGLVNE 1576

Query: 321  AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            A D+   M+ +     A  +  L+  +     ++RA+++
Sbjct: 1577 AEDL---MLGMPCKPSAATWNCLLSAYKICGDFERALRV 1612


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 242/477 (50%), Gaps = 10/477 (2%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           ++ +M K+ V  D     V++++  + G V+ ++ + D M   G++  + +Y+++ K +L
Sbjct: 181 VISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLL 240

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R GR+  A+  F  M + G+ P   ++N+++ GF  + +LE A+RF+++M+ R ++ DVV
Sbjct: 241 RNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVV 300

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           +++ +I  + R  +MD A +   EM+E  + P  + YT +I G+       +ALR+ DEM
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            +F   P+ VTY  LL GLC   ++ + +++L EM ER +PP D   F  L+   C+ G+
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPP-DLCTFTTLIHGYCRDGN 419

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A      +    +  +   Y  LI+  C+     +A +L D +  +EI   P     
Sbjct: 420 IEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIF--PNHV-- 475

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
               +Y+ +I   C  GQ   A  F  +++ KG++  +  +N++I+G+ + GN     + 
Sbjct: 476 ----TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF 531

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +  M    V  D   Y  LI  Y+++G+  +A   L  M  +   P +  +  ++     
Sbjct: 532 LPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSV 591

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            G +Q A  V K M  +G++ +      ++   ++ G+ +++    D M+Q G  P+
Sbjct: 592 HGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 209/426 (49%), Gaps = 10/426 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +++ L R G+ + AR +   M   GV  D   F +LI  + + G ++E+++ +  M
Sbjct: 231 TYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEM 290

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +   V   V S+  L  L  RRG    A  Y  +M   G+ P    Y +++ GF  +  +
Sbjct: 291 RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLM 350

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+R  ++M + G   DVVTYNT++NG  + +++ +AE+L  EMKE+ + P + ++TT+
Sbjct: 351 LEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTL 410

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY      + AL+ FD +    ++P+ VTY  L+ G+C  G + +  ++  +M  R I
Sbjct: 411 IHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREI 470

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P ++  +  L+   C+ G ++ A   L  M+   I      Y  +I+ +C++    +  
Sbjct: 471 FP-NHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQ 529

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           + L K+   +++         +  +YN +I      G+  +A    + +  + V  D V 
Sbjct: 530 QFLPKMRHDKVM--------PDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVT 581

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N +I G S  GN   A  + K MG RG+  D   Y+ +I  ++  G    +    D M+
Sbjct: 582 YNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEML 641

Query: 477 EDGHSP 482
           + G +P
Sbjct: 642 QKGLAP 647



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 213/446 (47%), Gaps = 10/446 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
             +++ SY K     E   +   M++  V   V +++ +     R G    A    + M+
Sbjct: 162 LNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMV 221

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S+GI+P   TYN +L G   + + + A   F  M + G++ DV ++N +I G+ R  +++
Sbjct: 222 SKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELE 281

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA + + EM+ + + P V+S++ +I  +      D A     EM+ F + P+ V YT ++
Sbjct: 282 EALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C AG M+E  +V  EMV     P D   +  LL   CK   L+ A ++L  M    +
Sbjct: 342 GGFCRAGLMLEALRVRDEMVAFGCLP-DVVTYNTLLNGLCKERRLSDAEELLNEMKERGV 400

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
           P +   +  LI  +C+    ++A++  D + ++   LRP      +  +YN +I  +C  
Sbjct: 401 PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR--LRP------DIVTYNTLIDGMCRQ 452

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G  GKA   +  +  + +  + V ++ LI  H ++G  D+AF  +  M  +G+  +   Y
Sbjct: 453 GDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTY 512

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +I+ Y R G  +  +  L  M  D   P    + +++    ++G++  A  ++K M  
Sbjct: 513 NSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMEN 572

Query: 513 KGVKENLDLVAKILEALLMRGHVEEA 538
           + V+ +      I+    + G+++EA
Sbjct: 573 ENVQPDAVTYNMIISGFSVHGNMQEA 598



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/552 (23%), Positives = 250/552 (45%), Gaps = 13/552 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++LI +Y +    +E+ + F ++    V     + +AL   + R G   +    +  +
Sbjct: 91  VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAYRLV 150

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS   E   +T N+M+  +  +L+         +M+ R +  DVVT+N M++   R   +
Sbjct: 151 LSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDV 210

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A  L   M  K I+P +++Y +++KG +   R D A  +F  M +  V P+  ++  L
Sbjct: 211 EAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNML 270

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C AG++ E  +  +EM  R + P D   F  L+G+  + G ++ AA+ L+ M    
Sbjct: 271 IGGFCRAGELEEALRFYKEMRGRRVTP-DVVSFSCLIGLFTRRGEMDHAAEYLREMREFG 329

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   Y ++I  FC+A +   A+++ D++V    +         +  +YN ++  LC 
Sbjct: 330 LMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCL--------PDVVTYNTLLNGLCK 381

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +   AE    ++ ++GV  D   F  LI G+ ++GN + A +    +  + +  D   
Sbjct: 382 ERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVT 441

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+   R+G+   A    D M      P    +  +++S  E G+V  A   +  MV
Sbjct: 442 YNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV 501

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
            KG+  N+     I++     G+V +    +  M     +P+   +++L+    ++GK  
Sbjct: 502 NKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMH 561

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A  LL      +   D  +Y  ++      G    A  +  K+  +G   D  +   +I
Sbjct: 562 EAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMI 621

Query: 629 AGLNQEGNTKQA 640
            G    GN+K++
Sbjct: 622 NGHVVAGNSKKS 633



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 120/241 (49%), Gaps = 4/241 (1%)

Query: 28  NVLHGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
            ++HG     N E ALQFF  +    L   D  T+  +I+ + R G L  A  +  DM  
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISDQRL-RPDIVTYNTLIDGMCRQGDLGKANELWDDMHS 467

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           + +  +   + +LI+S+ +KG V  +    D M   G+  ++ +Y+++ K   R G    
Sbjct: 468 REIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSK 527

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
            +++  KM  + + P   TYN ++ G+    K+  A    + M++  +  D VTYN +I+
Sbjct: 528 GQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIIS 587

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G++    M EA+ ++ +M  + IEP   +Y +MI G+V    +  + ++ DEM    + P
Sbjct: 588 GFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647

Query: 265 N 265
           +
Sbjct: 648 D 648



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 132/282 (46%), Gaps = 35/282 (12%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L +  +L+ A  +L +M ++GV  D   F  LI  Y + G ++++++ F
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF 427

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKR--------------------------- 147
           D +    +   + +Y+ L   + R+G    A                             
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487

Query: 148 --------YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                   + ++M+++GI P   TYN ++ G+  S  +    +F   M+   +  D++TY
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+I+GY +  KM EA  L   M+ +N++P  ++Y  +I G+       +A  ++ +M +
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA 607

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             ++P+  TY +++ G   AG   +  ++  EM+++ + P D
Sbjct: 608 RGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 100/260 (38%), Gaps = 38/260 (14%)

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIM-------------------GRRGVPR-DADAY- 452
           P  F+ LIR +++   P  AFE  +++                    R G P   ADAY 
Sbjct: 89  PQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAYR 148

Query: 453 --------------ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
                           ++ SY +  +  +  T +  M +    P       ++++ F  G
Sbjct: 149 LVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAG 208

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
            V+ A  ++ SMV KG+K  L     +L+ LL  G  ++A      M   G  P+   F+
Sbjct: 209 DVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFN 268

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            L+      G+   A++      GR    D+ S+  ++      G+  +A   L ++ E 
Sbjct: 269 MLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF 328

Query: 616 GGVTDWKSSDKLIAGLNQEG 635
           G + D      +I G  + G
Sbjct: 329 GLMPDGVIYTMVIGGFCRAG 348


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 163/672 (24%), Positives = 304/672 (45%), Gaps = 34/672 (5%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
           R W   +  ++  L  + +  LV +V+   K+   A  FF W  +   ++H   T+  MI
Sbjct: 130 RKWDAEMGKQLERLKFKLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMI 189

Query: 64  EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
           + L    + +    IL  M K+G +    +   L+ ++G    V  +++IF+ MK  G  
Sbjct: 190 KRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCN 249

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
            S   Y+ + +L+++ G Y  A   F K+    I+P   T+ + +  F  S +L+ A   
Sbjct: 250 PSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEP 309

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
            ++M   GI   V T+  +I+   +   +DEA K F  MK     P V++YTT++ G   
Sbjct: 310 IQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAK 369

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP--KD 301
             R ++A  +F EMK  +  P+A+ Y  L+ GL  AG+      + +EM +R + P  + 
Sbjct: 370 AGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRT 429

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            ++ + +LG   K+G    A  +   +       +   Y  LI+   K    D+ + ++ 
Sbjct: 430 YNIMISVLG---KAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIK 486

Query: 362 KLVEK--EIILRPQSTLDMEAS---------------------SYNPMIQHLCHNGQTGK 398
           ++VEK  E I+   S    E +                     +YN ++    HNG   +
Sbjct: 487 EMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDE 546

Query: 399 AEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           A +   ++MKK    P  V +  L+ G  K G  D A  +++ M ++G       Y  L+
Sbjct: 547 A-VKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLM 605

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
            S+ ++ +  ++ +  D M+  G     S +  V+  L +   V  A  V   M E+G++
Sbjct: 606 ASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGME 665

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
             L     +L +L+    ++ AL   + + +S  VP+   ++ +++ L +  +   A KL
Sbjct: 666 PLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKL 725

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
           +D    ++ + DL +Y  +LD L  +G+   A+++  K+ E+G   D  +   L+  L +
Sbjct: 726 VDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGK 785

Query: 634 EGNTKQADILSR 645
            G    A I+ R
Sbjct: 786 GGKLSHALIIFR 797



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 221/459 (48%), Gaps = 10/459 (2%)

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            T+  +++ LG+ G+L+ A  +L +M K+G +     +  L+ S+ K+   +ES+ +FD M
Sbjct: 565  TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
             + G    V +Y  +   + +      A   F +M  EG+EP    Y  +L       K+
Sbjct: 625  VRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKI 684

Query: 178  ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            + A++ F +++   +  D   YN M+NG  +  ++DEA KL   MK +NI P + +YT++
Sbjct: 685  DFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSL 744

Query: 238  IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
            + G     R ++A  +F +M     +P+ V YT+L+  L   GK+     + R M ++  
Sbjct: 745  LDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRC 804

Query: 298  PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
             P D   +  L+    K G +  A    +  I        G Y  LI++F K  M DRA+
Sbjct: 805  VP-DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRAL 863

Query: 358  KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVA 416
            +L +++  ++    P + +     +YN ++  L   G+   AE    ++ K G V D V 
Sbjct: 864  ELFEEMQRRQC---PPNIV-----TYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVT 915

Query: 417  FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
            +N LI G  K G  D A    K M  +G+  D   +  LIES  +  +  +A    DSM 
Sbjct: 916  YNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSME 975

Query: 477  EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            E+G++P+   +  +++ L   G+V  A+ +   M  KG 
Sbjct: 976  EEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGC 1014



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 151/645 (23%), Positives = 294/645 (45%), Gaps = 45/645 (6%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            ++ + L  + N + A +FF  ++     + +  T+  ++  L + G+L  A  + ++M 
Sbjct: 326 TVLIDALVKSGNIDEACKFFNGMKNLRC-SPNVVTYTTLVNGLAKAGRLEEACEVFVEMK 384

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +     D   +  LI+  GK G    +  +F  MK  G+  ++++Y+ +  ++ + GR  
Sbjct: 385 ENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQP 444

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG------------ 191
            A + F+ +  +G  P   TYN ++       +++  +   ++M  +G            
Sbjct: 445 EAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAG 504

Query: 192 -------------------ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
                               SL  +TYNT+++ +     +DEA KL   MK+    PTV+
Sbjct: 505 HEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVV 564

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +YTT++ G     R D+A+ +  EM+    +P+ VTY++L+       +  E   +  EM
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           V +     D S +  ++   CKS  ++ A DV   M    +    G+Y  L+ +  K E 
Sbjct: 625 VRKGCVA-DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK 683

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            D A+++ ++L E  ++  P + +      YN M+  L  + +  +A      +  + +L
Sbjct: 684 IDFALQIFNELQESSLV--PDTFV------YNIMVNGLVKSNRVDEACKLVDSMKNQNIL 735

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D   + +L+ G  K G  + AF +   M   G   D  AY  L++   + G+ + A   
Sbjct: 736 PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALII 795

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
             +M +    P    + S+++SL ++GRV+ A    ++ + KG   N+ + + ++++   
Sbjct: 796 FRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGK 855

Query: 532 RGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
           +G V+ AL   + M +    PN   +++LLS L++ G+   A KLL+      C+ DL +
Sbjct: 856 KGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVT 915

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
           Y  ++D +   G    A S   ++ EKG V D  +   LI  L +
Sbjct: 916 YNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGK 960



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 157/658 (23%), Positives = 281/658 (42%), Gaps = 81/658 (12%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D +T    +    R G+L+ A   + +M K G+      F VLI++  K G + E+ K F
Sbjct: 286 DAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFF 345

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYM------------------------------- 143
           + MK L    +V +Y  L   + + GR                                 
Sbjct: 346 NGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKA 405

Query: 144 ----MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
               MA   F +M   G+ P   TYN+M+     + +   A + F D+K +G   DV TY
Sbjct: 406 GEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTY 465

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV---------------------------- 231
           NT+I+   +  +MD+   +  EM EK  E  +                            
Sbjct: 466 NTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKS 525

Query: 232 ---ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
              I+Y T++  ++     D+A+++ + MK  +  P  VTYT L+ GL  AG++ E   +
Sbjct: 526 LGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSL 585

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           LREM ++   P   + +  L+    K      +  +   M+R     +   Y ++I   C
Sbjct: 586 LREMEKQGCEPSVVT-YSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLC 644

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K++  D+A+ +  ++  KE  + P         +Y  ++  L  + +   A   F +L +
Sbjct: 645 KSDDVDQALDVFGRM--KEEGMEPL------LGNYKTLLSSLVKDEKIDFALQIFNELQE 696

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
             ++ D   +N ++ G  K    D A ++V  M  + +  D   Y  L++   + G   +
Sbjct: 697 SSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEE 756

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A      M E+GH P    + S+M+ L + G++  A  + ++M +K    ++   + +++
Sbjct: 757 AFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLID 816

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           +L   G VEEA    +  +  G  PN   + SL+    +KG    A++L +    R C  
Sbjct: 817 SLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPP 876

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEK-GGVTDWKSSDKLIAGLNQEGNTKQAD 641
           ++ +Y  +L  L  AG+ LN    L + MEK G V D  + + LI G+ + G   +A+
Sbjct: 877 NIVTYNNLLSGLAKAGR-LNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAE 933



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 159/644 (24%), Positives = 284/644 (44%), Gaps = 81/644 (12%)

Query: 13   KIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
            K R LVP    +N++ +VL  A     A Q F  ++  G    D  T+  +I++LG+ G+
Sbjct: 419  KDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV-PDVFTYNTLIDVLGKGGQ 477

Query: 72   LNHARCILLDMPKKG-----------------------VQW--------DEDMFEVLIES 100
            ++    I+ +M +KG                       V++         E  +  L+ +
Sbjct: 478  MDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSA 537

Query: 101  YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
            +   G V E+VK+ ++MK+     +V +Y  L   + + GR   A     +M  +G EP+
Sbjct: 538  FIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPS 597

Query: 161  RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
              TY+ ++  F+   + E ++  F++M  +G   DV TY+ +IN   +   +D+A  +F 
Sbjct: 598  VVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFG 657

Query: 221  EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
             MKE+ +EP + +Y T++   V  E+ D AL+IF+E++   + P+   Y  ++ GL  + 
Sbjct: 658  RMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717

Query: 281  KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            ++ E  K++  M  + I P D   +  LL    KSG L  A ++   M      TE GH 
Sbjct: 718  RVDEACKLVDSMKNQNILP-DLFTYTSLLDGLGKSGRLEEAFNMFTKM------TEEGH- 769

Query: 341  GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
                                    E +++            +Y  ++  L   G+   A 
Sbjct: 770  ------------------------EPDVV------------AYTSLMDVLGKGGKLSHAL 793

Query: 401  IFFRQLMKK-GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
            I FR + KK  V D V +++LI    KEG  + A+   +    +G   +   Y  LI+S+
Sbjct: 794  IIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSF 853

Query: 460  LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
             +KG    A    + M      P    + +++  L + GR+  A ++++ M + G   +L
Sbjct: 854  GKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDL 913

Query: 520  DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                 +++ +   G V+EA      M + G VP+   F SL+  L +  K + A +L D 
Sbjct: 914  VTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDS 973

Query: 577  CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
                     + +Y  ++D L  AGK   A  I  ++  KG + D
Sbjct: 974  MEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 125/241 (51%), Gaps = 1/241 (0%)

Query: 28   NVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGV 87
            +VL       HAL  FR + +      D  T+  +I+ LG+ G++  A     +   KG 
Sbjct: 781  DVLGKGGKLSHALIIFRAMAKKRCV-PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGC 839

Query: 88   QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
              +  ++  LI+S+GKKG+V  ++++F+ M++     ++ +Y+ L   + + GR  +A++
Sbjct: 840  TPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEK 899

Query: 148  YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
               +M   G  P   TYN+++ G      ++ A  +F+ MK +GI  DV+T+ ++I    
Sbjct: 900  LLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLG 959

Query: 208  RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
            +  K+ EA +LF  M+E+   P+V++Y  +I       +  +A  IF EMK     P+ +
Sbjct: 960  KVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGI 1019

Query: 268  T 268
            T
Sbjct: 1020 T 1020



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%)

Query: 55   DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
            D  T+  +I+ +G++G ++ A      M +KG+  D   F  LIES GK   + E+ ++F
Sbjct: 912  DLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELF 971

Query: 115  DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
            D M++ G   SV +Y+ L  ++ R G+   A   F++M  +G  P   T  +M
Sbjct: 972  DSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 151/578 (26%), Positives = 275/578 (47%), Gaps = 17/578 (2%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T+  +I  L + GK+  A  ++ +M +KGV  D   + ++++   + G V E+ 
Sbjct: 6   FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++F  M + G   +  +Y+AL   + +      A +   +M S+G EP   TYN +L G 
Sbjct: 66  ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA--EMKEKNIEP 229
               K+  A +FF+ M SRG S DVV YN +++   +  K+ EA  LF   +M ++ + P
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAP 185

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            +I+Y T+I G+  VE+ D+A+++F ++ +    P+ VTY ++L GL     M E +++ 
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 245

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
           ++MV+    P + + +  +L   C+ G++    ++ + M       +      +I+  CK
Sbjct: 246 KKMVDSGCAP-NGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCK 304

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
           A+  D A K+L+++   +I   P      +  +YN ++  LC      KA   F  ++  
Sbjct: 305 AKKVDDAHKVLEEM--SKIGAVP------DVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G   D V+++ ++ G  K      A  +   M  R +  D   +  L++   + G+  +A
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           K  LD M E    P      ++M  L  D R   A R+ + MVEKG   ++     +L  
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476

Query: 529 LLMRGHVEEALGRIDLMMQSGS-----VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
           L   G + +AL     M++S       V  + +L++ L E G+   AV       G  C 
Sbjct: 477 LCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCA 536

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
            D  +Y  +++ L   G+ + A  +   + EKG ++D 
Sbjct: 537 PDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 574



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 142/575 (24%), Positives = 258/575 (44%), Gaps = 17/575 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M +KG + D   +  +I    K G V E++++ + M + GV   V +Y  +   + R G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F+KM+  G       YN ++ G      +E A +  E+M S+G   D +TYNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G  R  K+ EA++ F  M  +   P V++Y  ++       +  +A  +F  M   D
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 262 --VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             V P+ +TY  L+ G C   K  E  K+ ++++ +   P   +    LLG+  KS +++
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS-NMD 239

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A ++ K M+          Y I++   C+     R ++L +++ EK     P   L   
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR--FSPDVLL--- 294

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
               N +I  LC   +   A     ++ K G V D V +N L+ G  K    D A E+  
Sbjct: 295 ---CNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 351

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G   D  +Y  ++    +  +  DA+   D MIE    P    F  +M+ L + G
Sbjct: 352 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 411

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---D 555
           ++  A  ++  M E  V  +      ++  L      +EA+     M++ G+V +    +
Sbjct: 412 KLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHN 471

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCII--DLASYEKVLDALLAAGKTLNAYSILFKIM 613
            +L+ L  +GK   A+      +  D     D+ +Y  +++AL+ AG+   A     ++ 
Sbjct: 472 IVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT 531

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
             G   D+ + + L+ GL ++G   QAD L++ ++
Sbjct: 532 GSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMK 566



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 213/466 (45%), Gaps = 21/466 (4%)

Query: 24  NLVYN-VLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           N+ YN +L G     K SE A QFF  +   G ++ D   +  +++ L + GK+  A  +
Sbjct: 115 NITYNTILSGLCRMGKVSE-AKQFFDSMPSRG-YSPDVVAYNGLLDALYKEGKVAEAWGL 172

Query: 79  L--LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
              +DM  + V  D   +  LI+ + +     E++K+F  +   G      +Y+++   +
Sbjct: 173 FKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGL 232

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            R+     A+  F KM+  G  P   TY+++L G      +   +  +E+M  +  S DV
Sbjct: 233 ARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDV 292

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           +  N +I+   + KK+D+A K+  EM +    P V++Y  ++ G       D A  +F  
Sbjct: 293 LLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFST 352

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M      P+ V+Y+ +L GLC   K+ + + +   M+ER + P D   F  L+   CK+G
Sbjct: 353 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP-DVVTFNILMDGLCKAG 411

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L+ A D+L  M   ++  +      L+   C+ +  D A++L   +VEK  +       
Sbjct: 412 KLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV------- 464

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDP--VAFNNLIRGHSKEGNPDSA 433
             +   +N ++  LC  G+  +A +FF+ ++K  G   P  V +  L+    + G  D A
Sbjct: 465 -ADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQA 523

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            +  + M   G   D  AY  L+    ++G    A     +M E G
Sbjct: 524 VDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 170/686 (24%), Positives = 304/686 (44%), Gaps = 75/686 (10%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           RAL P+     V  V+    +  +AL+ F  V+    F H  ET+  MIE LG  GK   
Sbjct: 3   RALQPKH----VAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEA 58

Query: 75  ARCILLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
              +L +M K    +  E ++  ++  YG+KG VQE+V +F+ M     E SV+SY+A+ 
Sbjct: 59  MEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIM 118

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
            +++  G +  A + + +M   GI P  +T+ + +  F ++ +   A+R   +M  +G  
Sbjct: 119 NILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCE 178

Query: 194 LDVVTYNTMING----------YNRFKKM-------------------------DEAEKL 218
            + V+Y  +I+G          Y+ F +M                          E+EKL
Sbjct: 179 FNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKL 238

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F+++ ++ + P + ++   I+G       D+A R+ + + S  + P+ ++Y  L+ G C 
Sbjct: 239 FSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK-AMIRLSIPTEA 337
             K+VE +  L +MV   + P + + +  ++   CK+G +  A  +L+ AM +  IP E 
Sbjct: 299 HSKLVEAECYLHKMVNSGVEPNEFT-YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEK----EIILRP----------------QSTLD 377
             Y  LI   C     +RA+ +  + +EK     IIL                  Q   D
Sbjct: 358 T-YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKD 416

Query: 378 M-------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
           M       +  +YN ++  LC  G    A       + KG + D   FN LI G+ K+ N
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            D A EI+  M   G+  D   Y  L+    +  +  +      +M+E G +P    +  
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ-- 547
           ++ES  +D +V  A  + K M  +G+  ++  +  ++  L   G +++A      + +  
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 548 --SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
             S S   F+ +++   EK     A KL     G DC  D  +Y  ++D+    G    A
Sbjct: 597 KFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656

Query: 606 YSILFKIMEKGGVTDWKSSDKLIAGL 631
           ++ L + + KG V  + +  K++  L
Sbjct: 657 HTFLLENISKGLVPSFTTCGKVLNCL 682



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/560 (24%), Positives = 257/560 (45%), Gaps = 14/560 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T  K+I +L + G +  +  +   + K+GV  +   F + I+   +KG + E+ ++ 
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLL 274

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + +   G+   V SY+ L     +  + + A+ Y +KM++ G+EP   TYN ++ GF  +
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             ++ A +   D   +G   D  TY+++ING      M+ A  +F E  EK  + ++I Y
Sbjct: 335 GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++KG         AL++  +M      P+  TY  ++ GLC  G + +   +L + + 
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           +   P D   F  L+   CK  +++ A ++L  M+   I  +   Y  L+   CKA   D
Sbjct: 455 KGCIP-DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
             +     ++EK     P         +YN +I+  C + +  +A   F+++  +G+  D
Sbjct: 514 NVVDTFKAMLEKGC--TPNII------TYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565

Query: 414 PVAFNNLIRGHSKEGNPDSAFEI-VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
            V    LI G    G  D A+E+ V I            +  +I ++  K   + A+   
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLF 625

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M     +P +  +R +++S  + G +  A   +   + KG+  +     K+L  L + 
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVT 685

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
             + EA+  I+LM+Q+G VP  + + S+     K +AA K++   L +   I   SYE +
Sbjct: 686 HRLSEAVVIINLMVQNGIVP--EEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELL 743

Query: 593 LDALLAAGKTLNAYSILFKI 612
            D  +   K + A  +L+K+
Sbjct: 744 YDG-IRNRKVVEARPLLYKV 762



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/408 (22%), Positives = 192/408 (47%), Gaps = 10/408 (2%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           +F +N + N    A   ++A +  R     G F  D  T+  +I  L   G +N A  + 
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKG-FIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +  +KG +    ++  L++   K+G+V +++++   M + G    + +Y+ +   + + 
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G    A    N  +++G  P   T+N ++ G+     ++ AI   + M S GI+ DV+TY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT++NG  + +K+D     F  M EK   P +I+Y  +I+ +    +  +A+ +F EMK+
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+ VT   L+ GLC  G++ +  ++   + + Y      ++F  ++   C+  +++
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVS 619

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  +   M       +   Y ++I+++CK    D A   L + + K ++  P  T    
Sbjct: 620 MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLV--PSFT---- 673

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKE 427
             +   ++  LC   +  +A +    +++ G++ P   N++     KE
Sbjct: 674 --TCGKVLNCLCVTHRLSEAVVIINLMVQNGIV-PEEVNSIFEADKKE 718



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 6/214 (2%)

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  D   +   ++S+   G P  A   L++M   G    +  + +V+   +++     A
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             +   M+++G+  ++    K++  L  +G+V+E+      +M+ G  PN   F+  +  
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L  KG    A +LL+  +      D+ SY  ++       K + A   L K++  G   +
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 621 WKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
             + + +I G  + G  + AD   +++R  M +G
Sbjct: 321 EFTYNTIINGFCKAGMMQNAD---KILRDAMFKG 351



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 9/247 (3%)

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           L P     +IR  +   N    F  VK     G     + Y C+IE     G+    +  
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKT--EDGFKHTLETYKCMIEKLGLHGKFEAMEDV 62

Query: 472 LDSMIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
           L  M ++  S     ++  +M      G+VQ A  V + M     + ++     I+  L+
Sbjct: 63  LAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILV 122

Query: 531 MRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G+  +A      M   G  P+  +    +      G+  AA++LL+   G+ C  +  
Sbjct: 123 EYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV 182

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           SY  V+         + AY +  +++++G   D  + +KLI  L ++GN ++++   ++ 
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESE---KLF 239

Query: 648 RGEMSRG 654
              M RG
Sbjct: 240 SKVMKRG 246


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 178/705 (25%), Positives = 305/705 (43%), Gaps = 96/705 (13%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  V+   K+   AL+ F  + +   F H   T+  +IE LG  GK      +L+DM + 
Sbjct: 10  VTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQN 69

Query: 86  -GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            G    E ++   +++YG+KG VQE+V +F+ M     E +V SY+A+  +++  G +  
Sbjct: 70  VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQ 129

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A + + +M   GI P  +++ + +  F  + +   A+R   +M S+G  ++VV Y T++ 
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189

Query: 205 ----------GYNRFKKM-------------------------DEAEKLFAEMKEKNIEP 229
                     GY  F KM                          E EKL  ++ ++ + P
Sbjct: 190 GFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLP 249

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            + +Y   I+G       D A+R+   +     KP+ VTY  L+ GLC   K  E +  L
Sbjct: 250 NLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYL 309

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL-KAMIRLSIPTEAGHYGILIENFC 348
            ++V   + P D+  +  L+   CK G +  A  +L  A+    +P E   Y  LI+  C
Sbjct: 310 GKLVNEGLEP-DSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEF-TYRSLIDGLC 367

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
                +RA+ L ++ + K I  +P   L      YN +I+ L + G   +A     ++ +
Sbjct: 368 HEGETNRALALFNEALGKGI--KPNVIL------YNTLIKGLSNQGLILEAAQLASEMSE 419

Query: 409 KGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KG++  V  FN L+ G  K G    A  +VK+M  +G   D   +  LI  Y  + +  +
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A   LD M+++G  P    + S++  L +  + +      K+MVEKG   NL     +LE
Sbjct: 480 ALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLE 539

Query: 528 ALLMRGHVEEALGRIDLM---------------------------------------MQS 548
           +L     +++ALG ++ M                                       M S
Sbjct: 540 SLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVS 599

Query: 549 GSVPNFDSLLSVLSEKGKTIAAVKL----LDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            S P ++ ++   +EK     A KL    +D CLG D      +Y  ++D     G    
Sbjct: 600 CSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY----TYRLMVDGFCKTGNVDL 655

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ-ADILSRMIR 648
            Y  L ++ME G +    +  ++I  L  E    + A I+ RM++
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 244/545 (44%), Gaps = 34/545 (6%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   GV      F  L+    KKG V+E  K+ D + + GV  ++ +Y+   + + ++G 
Sbjct: 207 MLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGE 266

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A R   +++ +G +P   TYN +++G   + K + A  +   + + G+  D  TYNT
Sbjct: 267 LDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNT 326

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I GY +   +  AE++          P   +Y ++I G       + AL +F+E     
Sbjct: 327 LIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKG 386

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           +KPN + Y  L+ GL + G ++E  ++  EM E+ + P+  + F  L+   CK G ++ A
Sbjct: 387 IKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQT-FNILVNGLCKMGCVSDA 445

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLD- 377
             ++K MI      +   + ILI  +      + A+++LD +++  +   +    S L+ 
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505

Query: 378 ----------MEAS-------------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
                     ME               ++N +++ LC   +  KA     ++  K V  D
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGR-RGVPRDADAYICLIESYLRKGEPADAKTAL 472
            V F  LI G  K G+ D A+ + + M     V      Y  +I ++  K     A+   
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLF 625

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M++    P    +R +++   + G V    + +  M+E G   +L  + +++  L + 
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKL-LDFCLGRDCIIDLASYEK 591
             V EA G I  M+Q G VP  +++ ++     K +AA KL L+  L + CI   A YE 
Sbjct: 686 DRVYEAAGIIHRMVQKGLVP--EAVNTIFDHDKKEVAAPKLVLEDLLKKSCITYYA-YEL 742

Query: 592 VLDAL 596
           + D L
Sbjct: 743 LFDGL 747



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 188/407 (46%), Gaps = 12/407 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFN---HDRETHLKMIEILGRVGKLNHARCILL 80
           +  YN L         +Q    +    +FN    D  T+  +I+ L   G+ N A  +  
Sbjct: 321 SFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFN 380

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +   KG++ +  ++  LI+    +G++ E+ ++   M + G+   V++++ L   + + G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMG 440

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A      M+S+G  P   T+N+++ G+   LK+E A+   + M   G+  DV TYN
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYN 500

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           +++NG  +  K ++  + +  M EK   P + ++  +++      + D AL + +EMK+ 
Sbjct: 501 SLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNK 560

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+AVT+  L+ G C  G +     + R+M E Y+       +  ++    +  ++  
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTM 620

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  + + M+   +  +   Y ++++ FCK    D   K L +++E   I  P  T     
Sbjct: 621 AEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFI--PSLT----- 673

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKE 427
            +   +I  LC   +  +A     ++++KG++ P A N +     KE
Sbjct: 674 -TLGRVINCLCVEDRVYEAAGIIHRMVQKGLV-PEAVNTIFDHDKKE 718


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 169/659 (25%), Positives = 294/659 (44%), Gaps = 60/659 (9%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N+E   QF+ W      F H   +  K + +L + G  + A+ I L   +   +   + F
Sbjct: 90  NAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSG--SPAKAIDLFRSRLPPRCRPNHF 147

Query: 95  E---VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF-N 150
               +L  +Y   G V+ ++  F  ++     RSV  Y+ + + + R G    A   F  
Sbjct: 148 TYSTLLRATYKAGGDVERTLGFFRRIRS--SSRSVADYNIVLQSLCRAGETARALEIFRG 205

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +M  +G+ PT  TYN ++ G   S +L   +  FE++  RG   DVVTYNT+I+   +  
Sbjct: 206 EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAG 265

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM--KSFDVKPNAVT 268
            ++EA +L  +M  ++  P V++Y+ +I G   V R D+A  +  EM  KS DV PN +T
Sbjct: 266 DLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 325

Query: 269 YTALLPGLCD---AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
           Y + L GLC      +  E+ + LR+   R  P  D   F  L+   CK G ++ A  V 
Sbjct: 326 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP--DTVTFSTLIDGLCKCGQIDEACSVF 383

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             MI          Y  L+   CKA+  +RA  +++ +V+K +          +  +Y+ 
Sbjct: 384 DDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVT--------PDVITYSV 435

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG-RR 443
           ++   C   +  +A      +  +G   + V FN++I G  K      AF++   M  + 
Sbjct: 436 LVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKH 495

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIE----------DGHS------------ 481
           G+  D   Y  LI+   R G    A+  LD+M +          +G S            
Sbjct: 496 GLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVY 555

Query: 482 ---------PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
                    P    F  ++    + G  + AS + + MV K ++ ++     +++ L   
Sbjct: 556 NRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKA 615

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G VE A   +DLM   G  PN   +++L+  L + G+   A + L+  +   C+ D  +Y
Sbjct: 616 GQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITY 675

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
             ++ AL  A +T +A  ++ ++   G   D  + + L+ GL + G T+QA  +L  M+
Sbjct: 676 GSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMV 734



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 280/650 (43%), Gaps = 67/650 (10%)

Query: 15   RALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
            R   P     N + + L  +  S  A Q F  +        D+ T+  +I+ L R G+  
Sbjct: 459  RGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAG 518

Query: 74   HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
             A  +L  MP      D   F   I    K G V  ++++++ M +L +     +++ L 
Sbjct: 519  QAEALLDAMPDP----DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILI 574

Query: 134  KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
                + G +  A   F +M+++ ++P   T+  ++ G   + ++E A    + M + G+ 
Sbjct: 575  AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 634

Query: 194  LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
             +VVTYN +++G  +  +++EA +   EM      P  I+Y +++       R DDAL++
Sbjct: 635  PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 694

Query: 254  FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
              E+KSF   P+ VTY  L+ GL  +G+  +   VL EMV +   P D   +  L+   C
Sbjct: 695  VSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHP-DVVTYNTLIDSLC 753

Query: 314  KSGHLNAA----ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
            K+G L  A     D+   + R  +P     Y +LI   CK    D A +L+ +++ K   
Sbjct: 754  KAGDLEEARRLHGDMSSRVSRCCVPNVV-TYSVLINGLCKVGRIDEARELIQEMMRKSCD 812

Query: 370  LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL----DPVAFNNLIRGHS 425
            + P         +YN  +  LC      +A    R L + G L    D V F+ LI G  
Sbjct: 813  VLPNII------TYNSFLDGLCKQSMMAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLC 865

Query: 426  KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
            K G  D A  +                                    D MI  G+ P   
Sbjct: 866  KCGQTDEACNV-----------------------------------FDDMIAGGYVPNVV 890

Query: 486  LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
             +  +M  L +  +++ A  +++SMV+KGV  ++   + +++A     HV+EAL  +  M
Sbjct: 891  TYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGM 950

Query: 546  MQSGSVPN---FDSLLSVLSEKGKTIAAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGK 601
               G  PN   F+S++  L +  ++  A ++  D  L      D  +Y  ++D L   G 
Sbjct: 951  ASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGW 1010

Query: 602  TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEM 651
               A  +L  + +     D  + +  I GL++ G+  +A  L RM+  E+
Sbjct: 1011 AGQAEVLLDAMPDP----DTYAFNCCINGLSKLGDVSRA--LHRMLELEL 1054



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 143/641 (22%), Positives = 291/641 (45%), Gaps = 30/641 (4%)

Query: 23  HNLVYNVLHGAKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           +N + N L  +      ++ F   VER    + D  T+  +I+ L + G L  AR +  D
Sbjct: 219 YNTIINGLCKSNELGAGMELFEELVERG--HHPDVVTYNTLIDSLCKAGDLEEARRLHGD 276

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM--KQLGVERSVKSYDALFKLILRR 139
           M  +    +   + VLI    K G + E+ ++   M  K   V  ++ +Y++    + ++
Sbjct: 277 MSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 336

Query: 140 GRYMMAKRYFNKMLSEG---IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
                A     + L +G   + P   T++ ++ G     +++ A   F+DM + G   +V
Sbjct: 337 SMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV 395

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           +TYN ++NG  +  KM+ A  +   M +K + P VI+Y+ ++  +    R D+AL +   
Sbjct: 396 ITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 455

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M S    PN VT+ +++ GLC + +  E  ++  +M  ++    D   +  L+    ++G
Sbjct: 456 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTG 515

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
               A  +L AM       +   +   I    K     RA+++ ++++E E++  P    
Sbjct: 516 RAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELV--PDKV- 568

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                ++N +I   C  G   +A   F +++ K +  D + F  LI G  K G  ++A +
Sbjct: 569 -----TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARD 623

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           I+ +MG  GVP +   Y  L+    + G   +A   L+ M+  G  P S  + S++ +L 
Sbjct: 624 ILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 683

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
              R   A +++  +   G   +      +++ L   G  E+A+  ++ M+  G  P+  
Sbjct: 684 RASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVV 743

Query: 554 -FDSLLSVLSEKGKTIAAVKL---LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
            +++L+  L + G    A +L   +   + R C+ ++ +Y  +++ L   G+   A  ++
Sbjct: 744 TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803

Query: 610 FKIMEKGG--VTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
            ++M K    + +  + +  + GL ++    +A  L R +R
Sbjct: 804 QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR 844


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 274/587 (46%), Gaps = 48/587 (8%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           + +VL+++Y K G VQ++ ++  +M+  G+  S++  +AL K +LR     +  +    M
Sbjct: 49  VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFM 108

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  GI P  +TY+ ++  +    + +TA +   +M+ RG  L+ VTYN +I G  R   +
Sbjct: 109 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 168

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +EA     +M++  + P   +Y  +I G     R+++A  + DEM   ++KPN V Y  L
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G    G   E  K+++EMV   + P +   +  L+   CK G ++ A+ +LK M+R S
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQP-NKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287

Query: 333 IPTEA--------GH---------------------------YGILIENFCKAEMYDRAI 357
              +         GH                           Y I+I   C++   ++A 
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            LL+++  K   L+P       A  Y P+I   C  G    A   F ++ K  VL D   
Sbjct: 348 DLLEEMTTKG--LKPN------AFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 399

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N+LI G SK G  + + +    M  RG+  +   Y  LI  YL+ G+   A+  +  M+
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           + G  P   ++  ++ES F+   ++  S   KSM+++GV  +  +   ++  L   G++E
Sbjct: 460 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 519

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
            A   +  + ++GSVP+   + SL+S L +      A  +LD    +    ++  Y  ++
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 579

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D L  +G    A ++   I+ KG V +  +   LI G  + G+   A
Sbjct: 580 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 626



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 151/640 (23%), Positives = 300/640 (46%), Gaps = 18/640 (2%)

Query: 23  HNLVYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           + + YNVL      +   E A  F + +E  GL   D  T+  +I  L +  + N A+ +
Sbjct: 151 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVP-DGFTYGALINGLCKSRRSNEAKAL 209

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           L +M    ++ +  ++  LI+ + ++G   E+ K+   M   GV+ +  +YD L + + +
Sbjct: 210 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 269

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G+   A     +M+ +   P   TYN+++ G F     + A R   +M++ GIS +V T
Sbjct: 270 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYT 329

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y+ MI+G  +  + ++A  L  EM  K ++P    Y  +I GY        A  IFD+M 
Sbjct: 330 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 389

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
             +V P+   Y +L+ GL   G++ E  K   +M ER + P + + +  L+    K+G L
Sbjct: 390 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT-YSGLIHGYLKNGDL 448

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            +A  +++ M+   +      Y  L+E++ K++  ++       ++++ ++L        
Sbjct: 449 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML-------- 500

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           +   Y  +I +L  +G    A     ++ K G V D   +++LI G  K  + + AF I+
Sbjct: 501 DNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 560

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M ++GV  +   Y  LI+   + G+ + A+   +S++  G  P    + S+++   + 
Sbjct: 561 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 620

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--SVPNFD 555
           G +  A  +   M+  G+  +  + + +       G +E+A+  I+ M   G  S+ +F+
Sbjct: 621 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFN 680

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +L+    ++GK    +KLL   +GR  + +  + E ++  L  AGK    ++I  ++ +K
Sbjct: 681 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 740

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGS 655
              +  +    L   +  +G     D++  MIR     G+
Sbjct: 741 TSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGN 779



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/607 (22%), Positives = 276/607 (45%), Gaps = 50/607 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +IE   +V + + A+ +L++M ++G   +   + VLI    + G V+E+    
Sbjct: 116 DVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 175

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  G+     +Y AL   + +  R   AK   ++M    ++P    Y  ++ GF   
Sbjct: 176 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 235

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              + A +  ++M + G+  + +TY+ ++ G  +  +MD A  L  +M   +  P  I+Y
Sbjct: 236 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 295

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I+G+       DA R+  EM++  + PN  TY+ ++ GLC +G+  +   +L EM  
Sbjct: 296 NLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 355

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + + P +  V+  L+   C+ G+++ A ++   M +++         +L + +C      
Sbjct: 356 KGLKP-NAFVYAPLISGYCREGNVSLACEIFDKMTKVN---------VLPDLYC------ 399

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
                                       YN +I  L   G+  ++  +F Q+ ++G+L +
Sbjct: 400 ----------------------------YNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 431

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              ++ LI G+ K G+ +SA ++V+ M   G+  +   YI L+ESY +  +     +   
Sbjct: 432 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 491

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           SM++ G    + ++  ++ +L   G ++ A RV+  + + G   ++ + + ++  L    
Sbjct: 492 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTA 551

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
             E+A G +D M + G  PN   +++L+  L + G    A  + +  L +  + +  +Y 
Sbjct: 552 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 611

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL--SRMIR 648
            ++D     G   NA+ +  +++  G   D      L  G +  G+ +QA  L     +R
Sbjct: 612 SLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 671

Query: 649 GEMSRGS 655
           G  S  S
Sbjct: 672 GHASISS 678



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 120/546 (21%), Positives = 227/546 (41%), Gaps = 98/546 (17%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +NL+        N + A +    +E AG+ + +  T+  MI  L + G+   A  +L +M
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGI-SPNVYTYSIMIHGLCQSGEPEKASDLLEEM 353

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG++ +  ++  LI  Y ++G V  + +IFD M ++ V   +  Y++L   + + GR 
Sbjct: 354 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 413

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF------------------- 183
             + +YF +M   G+ P   TY+ ++ G+  +  LE+A +                    
Sbjct: 414 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 473

Query: 184 ----------------FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
                           F+ M  +G+ LD   Y  +I+  +    M+ A ++ +E+++   
Sbjct: 474 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGS 533

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P V  Y+++I G       + A  I DEM    V PN V Y AL+ GLC +G +   + 
Sbjct: 534 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 593

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA---------- 337
           V   ++ + + P +   +  L+   CK G ++ A  +   M+   I  +A          
Sbjct: 594 VFNSILAKGLVP-NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 652

Query: 338 -------------------GHYGI-----LIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
                              GH  I     L++ FCK       +KLL  ++ + ++    
Sbjct: 653 SSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLV---P 709

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-------------------GVLDP 414
           + L +E      +I  L   G+  +    F +L +K                   G +  
Sbjct: 710 NALTIEN-----IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 764

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
              +++IR H KEGN D A  +  ++  +  P    +Y+ ++++  RKG+ ++A   L  
Sbjct: 765 DVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE 824

Query: 475 MIEDGH 480
           M + G+
Sbjct: 825 MDKRGN 830



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 163/364 (44%), Gaps = 33/364 (9%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  +I  L   G +  A  +L ++ K G   D  ++  LI    K    +++  I 
Sbjct: 501 DNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 560

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M + GV+ ++  Y+AL   + + G    A+  FN +L++G+ P   TY  ++ G    
Sbjct: 561 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 620

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A   + +M + GI+ D   Y+ +  G +    +++A  L  EM  +    ++ S+
Sbjct: 621 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSF 679

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G+    +  + L++   +    + PNA+T   ++ GL +AGK+ EV  +  E+ +
Sbjct: 680 NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQ 739

Query: 295 RYIPPKD---NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           +         +S+FM ++      G +    DV+  MIR               + CK  
Sbjct: 740 KTSESAARHFSSLFMDMI----NQGKI--PLDVVDDMIR---------------DHCKEG 778

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             D+A+ L D +V K        +  M  SSY  ++ +LC  G+  +A    +++ K+G 
Sbjct: 779 NLDKALMLRDVIVAK--------SAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGN 830

Query: 412 LDPV 415
           L P 
Sbjct: 831 LQPT 834


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 169/686 (24%), Positives = 303/686 (44%), Gaps = 75/686 (10%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           RAL P+     V  V+    +  +AL+ F  V+    F H  ET+  MIE LG  GK   
Sbjct: 3   RALQPKH----VAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEA 58

Query: 75  ARCILLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
              +L +M K    +  E ++  ++  YG+KG VQE+V +F+ M     E SV+SY+A+ 
Sbjct: 59  MEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIM 118

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
            +++  G +  A + + +M   GI P  +T+ + +  F ++ +   A+R   +M  +G  
Sbjct: 119 NILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCE 178

Query: 194 LDVVTYNTMING----------YNRFKKM-------------------------DEAEKL 218
            + V+Y  +I+G          Y+ F +M                          E+EKL
Sbjct: 179 FNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKL 238

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F+++ ++ + P + ++   I+G       D+A R+ + + S  + P+ ++Y  L+ G C 
Sbjct: 239 FSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK-AMIRLSIPTEA 337
             K+VE +  L +MV   + P + + +  ++   CK+G +  A  +L+ AM +  IP E 
Sbjct: 299 HSKLVEAECYLHKMVNSGVEPNEFT-YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEK----EIILRP----------------QSTLD 377
             Y  LI   C     +RA+ +  + +EK     IIL                  Q   D
Sbjct: 358 T-YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKD 416

Query: 378 M-------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
           M       +  +YN ++  LC  G    A       + KG + D   FN LI G+ K+ N
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            D A EI+  M   G+  D   Y  L+    +  +  +      +M+E G +P    +  
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ-- 547
           ++ES  +D +V  A  + K M  +G+  ++  +  ++  L   G +++A      + +  
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 548 --SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
             S S   F+ +++    K     A KL     G DC  D  +Y  ++D+    G    A
Sbjct: 597 KFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656

Query: 606 YSILFKIMEKGGVTDWKSSDKLIAGL 631
           ++ L + + KG V  + +  K++  L
Sbjct: 657 HTFLLENISKGLVPSFTTCGKVLNCL 682



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 248/541 (45%), Gaps = 13/541 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T  K+I +L + G +  +  +   + K+GV  +   F + I+   +KG + E+ ++ + +
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+   V SY+ L     +  + + A+ Y +KM++ G+EP   TYN ++ GF  +  +
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM 337

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A +   D   +G   D  TY+++ING      M+ A  +F E  EK  + ++I Y T+
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTL 397

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +KG         AL++  +M      P+  TY  ++ GLC  G + +   +L + + +  
Sbjct: 398 VKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   F  L+   CK  +++ A ++L  M+   I  +   Y  L+   CKA   D  +
Sbjct: 458 IP-DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
                ++EK     P         +YN +I+  C + +  +A   F+++  +G+  D V 
Sbjct: 517 DTFKAMLEKGCT--PNII------TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVT 568

Query: 417 FNNLIRGHSKEGNPDSAFEI-VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
              LI G    G  D A+E+ V I            +  +I ++  K   + A+     M
Sbjct: 569 LCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKM 628

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                +P +  +R +++S  + G +  A   +   + KG+  +     K+L  L +   +
Sbjct: 629 GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRL 688

Query: 536 EEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
            EA+  I+LM+Q+G VP  + + S+     K +AA K++   L +   I   SYE + D 
Sbjct: 689 SEAVVIINLMVQNGIVP--EEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELLYDG 746

Query: 596 L 596
           +
Sbjct: 747 I 747



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/408 (22%), Positives = 191/408 (46%), Gaps = 10/408 (2%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           +F +N + N    A   ++A +  R     G F  D  T+  +I  L   G +N A  + 
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKG-FIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +  +KG +    ++  L++   K+G+V +++++   M + G    + +Y+ +   + + 
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G    A    N  +++G  P   T+N ++ G+     ++ AI   + M S GI+ DV+TY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT++NG  + +K+D     F  M EK   P +I+Y  +I+ +    +  +A+ +F EMK+
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+ VT   L+ GLC  G++ +  ++   + + Y      ++F  ++   C   +++
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVS 619

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  +   M       +   Y ++I+++CK    D A   L + + K ++  P  T    
Sbjct: 620 MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLV--PSFT---- 673

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKE 427
             +   ++  LC   +  +A +    +++ G++ P   N++     KE
Sbjct: 674 --TCGKVLNCLCVTHRLSEAVVIINLMVQNGIV-PEEVNSIFEADKKE 718



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/242 (20%), Positives = 106/242 (43%), Gaps = 6/242 (2%)

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           ++N ++    + G    A ++   M   G+  D   +   ++S+   G P  A   L++M
Sbjct: 113 SYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM 172

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
              G    +  + +V+   +++     A  +   M+++G+  ++    K++  L  +G+V
Sbjct: 173 PGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           +E+      +M+ G  PN   F+  +  L  KG    A +LL+  +      D+ SY  +
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMS 652
           +       K + A   L K++  G   +  + + +I G  + G  + AD   +++R  M 
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD---KILRDAMF 349

Query: 653 RG 654
           +G
Sbjct: 350 KG 351



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 9/247 (3%)

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           L P     +IR  +   N    F  VK     G     + Y C+IE     G+    +  
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKT--EDGFKHTLETYKCMIEKLGLHGKFEAMEDV 62

Query: 472 LDSMIEDGHSPA-SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
           L  M ++  S     ++  +M      G+VQ A  V + M     + ++     I+  L+
Sbjct: 63  LAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILV 122

Query: 531 MRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G+  +A      M   G  P+  +    +      G+  AA++LL+   G+ C  +  
Sbjct: 123 EYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV 182

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           SY  V+         + AY +  +++++G   D  + +KLI  L ++GN ++++   ++ 
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESE---KLF 239

Query: 648 RGEMSRG 654
              M RG
Sbjct: 240 SKVMKRG 246


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 174/704 (24%), Positives = 301/704 (42%), Gaps = 94/704 (13%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  V+   K+   AL+ F  + +   F H   T+  +IE LG  GK      +L+DM + 
Sbjct: 10  VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69

Query: 86  -GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            G    E ++   +++YG+KG VQE+V +F+ M     E +V SY+A+  +++  G +  
Sbjct: 70  VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A + + +M   GI P  +++ + +  F  + +   A+R   +M S+G  ++VV Y T++ 
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189

Query: 205 ----------GYNRFKKM-------------------------DEAEKLFAEMKEKNIEP 229
                     GY  F KM                          E EKL  ++ ++ + P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            + +Y   I+G       D A+R+   +     KP+ +TY  L+ GLC   K  E +  L
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            +MV   + P D+  +  L+   CK G +  A  ++   +      +   Y  LI+  C 
Sbjct: 310 GKMVNEGLEP-DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
               +RA+ L ++ + K I  +P   L      YN +I+ L + G   +A     ++ +K
Sbjct: 369 EGETNRALALFNEALGKGI--KPNVIL------YNTLIKGLSNQGMILEAAQLANEMSEK 420

Query: 410 GVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G++  V  FN L+ G  K G    A  +VK+M  +G   D   +  LI  Y  + +  +A
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
              LD M+++G  P    + S++  L +  + +      K+MVEKG   NL     +LE+
Sbjct: 481 LEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLES 540

Query: 529 LLMRGHVEEALGRIDLMMQ---------------------------------------SG 549
           L     ++EALG ++ M                                         S 
Sbjct: 541 LCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS 600

Query: 550 SVPNFDSLLSVLSEKGKTIAAVKL----LDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
           S P ++ ++   +EK     A KL    +D CLG D      +Y  ++D     G     
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY----TYRLMVDGFCKTGNVNLG 656

Query: 606 YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ-ADILSRMIR 648
           Y  L ++ME G +    +  ++I  L  E    + A I+ RM++
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 247/543 (45%), Gaps = 17/543 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T  K++ +L + G +     +L  + K+GV  +   + + I+   ++G +  +V++   +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G +  V +Y+ L   + +  ++  A+ Y  KM++EG+EP  +TYN ++ G+     +
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A R   D    G   D  TY ++I+G     + + A  LF E   K I+P VI Y T+
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-Y 296
           IKG        +A ++ +EM    + P   T+  L+ GLC  G + +   +++ M+ + Y
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
            P  D   F  L+        +  A ++L  M+   +  +   Y  L+   CK   ++  
Sbjct: 458 FP--DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           ++    +VEK     P         ++N +++ LC   +  +A     ++  K V  D V
Sbjct: 516 METYKTMVEKGC--APN------LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGR-RGVPRDADAYICLIESYLRKGEPADAKTALDS 474
            F  LI G  K G+ D A+ + + M     V      Y  +I ++  K     A+     
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M++    P    +R +++   + G V    + +  M+E G   +L  + +++  L +   
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687

Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKL-LDFCLGRDCIIDLASYEKVL 593
           V EA G I  M+Q G VP  +++ ++     K +AA KL L+  L + CI   A YE + 
Sbjct: 688 VYEAAGIIHRMVQKGLVP--EAVNTICDVDKKEVAAPKLVLEDLLKKSCITYYA-YELLF 744

Query: 594 DAL 596
           D L
Sbjct: 745 DGL 747



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/405 (22%), Positives = 189/405 (46%), Gaps = 12/405 (2%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNH---DRETHLKMIEILGRVGKLNHARCILLDM 82
            YN L         +Q    +    +FN    D+ T+  +I+ L   G+ N A  +  + 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG++ +  ++  LI+    +G++ E+ ++ + M + G+   V++++ L   + + G  
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A      M+S+G  P   T+N+++ G+   LK+E A+   + M   G+  DV TYN++
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           +NG  +  K ++  + +  M EK   P + ++  +++      + D+AL + +EMK+  V
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+AVT+  L+ G C  G +     + R+M E Y        +  ++    +  ++  A 
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            + + M+   +  +   Y ++++ FCK    +   K L +++E   I  P  T      +
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI--PSLT------T 674

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKE 427
              +I  LC   +  +A     ++++KG++ P A N +     KE
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLV-PEAVNTICDVDKKE 718


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 153/650 (23%), Positives = 301/650 (46%), Gaps = 44/650 (6%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           +W  + + ++R L+     + V  VL    +   AL+FF W +R   + HD   +  M+E
Sbjct: 156 SWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLE 215

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           +L +      +R +L+ M ++G+    + F  ++ SY + G +++++K+  +M++ GVE 
Sbjct: 216 VLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEP 275

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           ++   +    + +R  R   A R+  +M   GI P   TYN M+ G+    ++E AI   
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVA 243
           EDM S+G   D V+Y T++    + K++ E   L  +M KE  + P  ++Y T+I     
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
            + AD+AL    + +    + + + Y+A++  LC  G+M E + ++ EM     PP D  
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---DCPP-DVV 451

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA-------EMYD-- 354
            +  ++   C+ G ++ A  +L+ M           Y  L+   C+        EM +  
Sbjct: 452 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 511

Query: 355 ----------------RAIKLLDKLVE-----KEIILRPQSTLDMEASSYNPMIQHLCHN 393
                             ++   KL E     +E++L+      +E    N ++Q LC +
Sbjct: 512 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI---NLLLQSLCRD 568

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+T +A  F  + + KG  ++ V F  +I G  +    D+A  ++  M       D   Y
Sbjct: 569 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 628

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L+++  +KG  A+A   +  M+  G  P    +R+V+    + G+V     +++ M+ 
Sbjct: 629 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 688

Query: 513 KGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA 569
           +  ++   +  +++E L + G +EEA   LG++             +L+    +KG  ++
Sbjct: 689 R--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLS 746

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           A K+      R+ I D+   EK+   L+  GK   A  ++ +++E+G ++
Sbjct: 747 AYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHIS 796


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 151/587 (25%), Positives = 275/587 (46%), Gaps = 48/587 (8%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           + +VL+++Y K G VQ++ ++  +M+  G+  S++  +AL K +LR     +  +    M
Sbjct: 176 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFM 235

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  GI P  +TY+ ++  +    + +TA +   +M+ RG  L+ VTYN +I G  R   +
Sbjct: 236 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 295

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +EA     +M++  + P   +Y  +I G     R+++A  + DEM   ++KPN V Y  L
Sbjct: 296 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 355

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G    G   E  K+++EMV   + P +   +  L+   CK G ++ A+ +LK M+R S
Sbjct: 356 IDGFMREGNADEAFKMIKEMVAAGVQP-NKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 333 IPTEA--------GH---------------------------YGILIENFCKAEMYDRAI 357
              +         GH                           Y I+I   C++   ++A 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            LL+++  K   L+P + +      Y P+I   C  G    A   F ++ K  VL D   
Sbjct: 475 DLLEEMTTKG--LKPNAFV------YAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 526

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N+LI G SK G  + + +    M  RG+  +   Y  LI  YL+ G+   A+  +  M+
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           + G  P   ++  ++ES F+   ++  S   KSM+++GV  +  +   ++  L   G++E
Sbjct: 587 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
            A   +  + ++GSVP+   + SL+S L +      A  +LD    +    ++  Y  ++
Sbjct: 647 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 706

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D L  +G    A ++   I+ KG V +  +   LI G  + G+   A
Sbjct: 707 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 753



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 151/640 (23%), Positives = 299/640 (46%), Gaps = 18/640 (2%)

Query: 23  HNLVYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           + + YNVL      +   E A  F + +E  GL   D  T+  +I  L +  + N A+ +
Sbjct: 278 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLV-PDGFTYGALINGLCKSRRSNEAKAL 336

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           L +M    ++ +  ++  LI+ + ++G   E+ K+   M   GV+ +  +YD L + + +
Sbjct: 337 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 396

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G+   A     +M+ +   P   TYN+++ G F     + A R   +M++ GIS +V T
Sbjct: 397 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 456

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y+ MI+G  +  + ++A  L  EM  K ++P    Y  +I GY        A  IFD+M 
Sbjct: 457 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 516

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
             +V P+   Y +L+ GL   G++ E  K   +M ER + P + + +  L+    K+G L
Sbjct: 517 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT-YSGLIHGYLKNGDL 575

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            +A  +++ M+   +      Y  L+E++ K++  ++       ++++ ++L        
Sbjct: 576 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML-------- 627

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           +   Y  +I +L  +G    A      + K G V D   +++LI G  K  + + AF I+
Sbjct: 628 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 687

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M ++GV  +   Y  LI+   + G+ + A+   +S++  G  P    + S+++   + 
Sbjct: 688 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 747

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--SVPNFD 555
           G +  A  +   M+  G+  +  + + +       G +E+A+  I+ M   G  S+ +F+
Sbjct: 748 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFN 807

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +L+    ++GK    +KLL   +GR  + +  + E ++  L  AGK    ++I  ++ +K
Sbjct: 808 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGS 655
              +  +    L   +  +G     D++  MIR     G+
Sbjct: 868 TSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGN 906



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 134/607 (22%), Positives = 276/607 (45%), Gaps = 50/607 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +IE   +V + + A+ +L++M ++G   +   + VLI    + G V+E+    
Sbjct: 243 DVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 302

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  G+     +Y AL   + +  R   AK   ++M    ++P    Y  ++ GF   
Sbjct: 303 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 362

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              + A +  ++M + G+  + +TY+ ++ G  +  +MD A  L  +M   +  P  I+Y
Sbjct: 363 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 422

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I+G+       DA R+  EM++  + PN  TY+ ++ GLC +G+  +   +L EM  
Sbjct: 423 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 482

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + + P +  V+  L+   C+ G+++ A ++   M +++         +L + +C      
Sbjct: 483 KGLKP-NAFVYAPLISGYCREGNVSLACEIFDKMTKVN---------VLPDLYC------ 526

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
                                       YN +I  L   G+  ++  +F Q+ ++G+L +
Sbjct: 527 ----------------------------YNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 558

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              ++ LI G+ K G+ +SA ++V+ M   G+  +   YI L+ESY +  +     +   
Sbjct: 559 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 618

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           SM++ G    + ++  ++ +L   G ++ A RV+  + + G   ++ + + ++  L    
Sbjct: 619 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA 678

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
             E+A G +D M + G  PN   +++L+  L + G    A  + +  L +  + +  +Y 
Sbjct: 679 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 738

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL--SRMIR 648
            ++D     G   NA+ +  +++  G   D      L  G +  G+ +QA  L     +R
Sbjct: 739 SLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 798

Query: 649 GEMSRGS 655
           G  S  S
Sbjct: 799 GHASISS 805



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/562 (21%), Positives = 239/562 (42%), Gaps = 100/562 (17%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A +    +E AG+ + +  T+  MI  L + G+   A  +L +M  KG++ +  ++  LI
Sbjct: 438 AFRLLSEMENAGI-SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 496

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             Y ++G V  + +IFD M ++ V   +  Y++L   + + GR   + +YF +M   G+ 
Sbjct: 497 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 556

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRF----------------------------------- 183
           P   TY+ ++ G+  +  LE+A +                                    
Sbjct: 557 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 616

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F+ M  +G+ LD   Y  +I+  +    M+ A ++ + +++    P V  Y+++I G   
Sbjct: 617 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 676

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
               + A  I DEM    V PN V Y AL+ GLC +G +   + V   ++ + + P +  
Sbjct: 677 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP-NCV 735

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  L+   CK G ++ A  +   M+   I  +A  Y +L      A   ++A+ L++  
Sbjct: 736 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIE-- 793

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ---------------------------T 396
              E+ LR  +++    SS+N ++   C  G+                           +
Sbjct: 794 ---EMFLRGHASI----SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIIS 846

Query: 397 GKAE---------IF------------------FRQLMKKGVLDPVAFNNLIRGHSKEGN 429
           G +E         IF                  F  ++ +G +     +++IR H KEGN
Sbjct: 847 GLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGN 906

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            D A  +  ++  +  P    +Y+ ++++  RKG+ ++A   L  M + G  P+ +    
Sbjct: 907 LDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLI 966

Query: 490 VMESLFEDGRVQTASRVMKSMV 511
           ++ +L   G +Q  + V+ +M+
Sbjct: 967 LLTNLHTSGYIQEHNTVLDNML 988



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/495 (23%), Positives = 213/495 (43%), Gaps = 34/495 (6%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M+ RG++  +   N ++    R   M    K+   M    I P V +Y+T+I+ Y  V  
Sbjct: 200 MRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVRE 259

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            D A ++  EM+      N VTY  L+ GLC +G + E     ++M +  + P D   + 
Sbjct: 260 FDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVP-DGFTYG 318

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+   CKS   N A  +L  M    +      Y  LI+ F +    D A K++ ++V  
Sbjct: 319 ALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA 378

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHS 425
            +  +P         +Y+ +++ LC  GQ  +A +  +Q+++     D + +N +I GH 
Sbjct: 379 GV--QPNKI------TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 430

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           +  +   AF ++  M   G+  +   Y  +I    + GEP  A   L+ M   G  P + 
Sbjct: 431 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 490

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
           ++  ++     +G V  A  +   M +  V  +L     ++  L   G VEE+      M
Sbjct: 491 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 550

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKL----LDFCLGRDCII------------DL 586
            + G +PN   +  L+    + G   +A +L    LD  L  + +I            D+
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 610

Query: 587 ASYEKVLDALLAAGKTLN--AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
                   ++L  G  L+   Y IL   +   G  + +++ ++++G+ + G+     + S
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG--NMEAAFRVLSGIEKNGSVPDVHVYS 668

Query: 645 RMIRGEMSRGSQKEK 659
            +I G + + + +EK
Sbjct: 669 SLISG-LCKTADREK 682


>gi|194691274|gb|ACF79721.1| unknown [Zea mays]
          Length = 191

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 98/173 (56%), Positives = 129/173 (74%)

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M++ GH P+ +LF+SVME+LF DGRVQTASRVMKSM+EKGV EN+D+  KILEAL  RGH
Sbjct: 1   MMQQGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEKGVTENMDVAHKILEALFTRGH 60

Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           VEEA+GR++LM+++G +P+ D LL  L + G+ + A KL DF L RD  +  ++Y++VL+
Sbjct: 61  VEEAIGRVNLMVENGCMPDLDKLLVGLCDNGRVMEAQKLADFALDRDFDVSFSTYDRVLE 120

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           AL A  KTL AYS+L KI  KGGV   K  D L+  L  EG +KQADILSR++
Sbjct: 121 ALYAEEKTLPAYSMLCKIKNKGGVVSQKGCDDLMESLKSEGYSKQADILSRIL 173


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 156/643 (24%), Positives = 295/643 (45%), Gaps = 40/643 (6%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGL----FNHDRETHLKMIEILGRVGKLNHAR-CILL 80
           V  VL+  +N     Q  R+V++ G     F H   +   MI IL R G+L+ A+ C+L 
Sbjct: 71  VVEVLYRCRNDLSLGQ--RFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLR 128

Query: 81  DMPKKGVQ----------------WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
            + + GV                  ++ +F++LI ++ +   ++E+ + F +++  G   
Sbjct: 129 MIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTV 188

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+ + +AL   ++R G   +A R + ++   G+    +T N+M+       K+E    F 
Sbjct: 189 SIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFL 248

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +++ +G+  D+VTYNT+I+ Y+    M+EA +L   M  K   P V +Y T+I G    
Sbjct: 249 SEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKH 308

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            + + A  +F EM    + P++ TY +LL   C  G  VE + +  +M  R + P D   
Sbjct: 309 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVP-DLVC 367

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           F  ++ +  +SG+L+ A     ++    +  +   Y ILI+ +C+  M   A+ L ++++
Sbjct: 368 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEML 427

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
                   Q    M+  +YN ++  LC     G+A+  F ++ ++G+  D      LI G
Sbjct: 428 --------QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDG 479

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
           H K GN  +A E+ K M  + +  D   Y  L++ + + G+   AK     M+     P 
Sbjct: 480 HCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 539

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              F  ++ +L   G +  A RV   M+ K +K  + +   +++     G+  +    ++
Sbjct: 540 PISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLE 599

Query: 544 LMMQSGSVPNFDSLLSVL------SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            M+  G VP+  S  +++          K    VK ++   G   + D+ +Y  +L    
Sbjct: 600 KMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQG-GLVPDVFTYNSILHGFC 658

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              +   A ++L K++E+G   D  +   LI G   + N  +A
Sbjct: 659 RENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 243/520 (46%), Gaps = 13/520 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A + ++ + R+G+  +    ++ M+  L + GK+      L ++ +KGV  D   +  
Sbjct: 207 ELAWRIYQEISRSGVGVNVYTLNI-MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNT 265

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI +Y  +G+++E+ ++   M   G    V +Y+ +   + + G+Y  AK  F +ML  G
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TY  +L               F DM+SR +  D+V +++M++ + R   +D+A 
Sbjct: 326 LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 385

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
             F  +KE  + P  + YT +I+GY       +A+ + +EM       + VTY  +L GL
Sbjct: 386 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGL 445

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C    + E  K+  EM ER + P D+     L+   CK G+L  A ++ K M    I  +
Sbjct: 446 CKRKMLGEADKLFNEMTERGLFP-DSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLD 504

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  L++ F K    D A ++   +V KEI+  P         S++ ++  LC  G  
Sbjct: 505 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP--------ISFSILVNALCSKGHL 556

Query: 397 GKAEIFFRQLMKKGVLDPVAF-NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A   + +++ K +   V   N++I+G+ + GN       ++ M   G   D  +Y  L
Sbjct: 557 SEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTL 616

Query: 456 IESYLRKGEPADAKTALDSMIED--GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           I  ++++   + A   +  M E   G  P    + S++     + +++ A  V++ M+E+
Sbjct: 617 IYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIER 676

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           GV  +      ++   + + ++ EA    D M+Q G  P+
Sbjct: 677 GVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 222/498 (44%), Gaps = 54/498 (10%)

Query: 25  LVYNVLHGAKNS----EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN L  A +S    E A +    +   G F+    T+  +I  L + GK   A+ +  
Sbjct: 261 VTYNTLISAYSSQGLMEEAFELMHAMPSKG-FSPGVYTYNTVINGLCKHGKYERAKEVFA 319

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M + G+  D   +  L+    KKG   E+  IF  M+   V   +  + ++  L  R G
Sbjct: 320 EMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSG 379

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A  YFN +   G+ P    Y +++ G+     +  A+    +M  +G ++DVVTYN
Sbjct: 380 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYN 439

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++G  + K + EA+KLF EM E+ + P   + T +I G+  +    +A+ +F +MK  
Sbjct: 440 TILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            +K + VTY  LL G    G +   +++  +MV + I P   S F  L+   C  GHL+ 
Sbjct: 500 RIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS-FSILVNALCSKGHLSE 558

Query: 321 AADVLKAMIRLSI-PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           A  V   MI  SI PT      ++I N                                 
Sbjct: 559 AFRVWDEMISKSIKPT------VMICN--------------------------------- 579

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
                 MI+  C +G     EIF  +++ +G V D +++N LI G  KE N   AF +VK
Sbjct: 580 -----SMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVK 634

Query: 439 IMGRR--GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
            M  +  G+  D   Y  ++  + R+ +  +A+  L  MIE G +P  S + S++     
Sbjct: 635 KMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVS 694

Query: 497 DGRVQTASRVMKSMVEKG 514
              +  A R    M+++G
Sbjct: 695 QDNLTEAFRFHDEMLQRG 712



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 122/233 (52%), Gaps = 3/233 (1%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N ++A++ F+ ++   +   D  T+  +++  G+VG ++ A+ I  DM  K +      F
Sbjct: 485 NLQNAMELFKKMKEKRI-KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISF 543

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            +L+ +   KG + E+ +++D M    ++ +V   +++ K   R G     + +  KM+S
Sbjct: 544 SILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMIS 603

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM--KSRGISLDVVTYNTMINGYNRFKKM 212
           EG  P   +YN +++GF     +  A    + M  K  G+  DV TYN++++G+ R  +M
Sbjct: 604 EGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQM 663

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
            EAE +  +M E+ + P   +YT++I G+V+ +   +A R  DEM      P+
Sbjct: 664 KEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 136/283 (48%), Gaps = 7/283 (2%)

Query: 25  LVYN-VLHGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN +LHG    K    A + F  +   GLF  D  T   +I+   ++G L +A  +  
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTERGLF-PDSYTLTILIDGHCKLGNLQNAMELFK 494

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M +K ++ D   +  L++ +GK G +  + +I+  M    +  +  S+  L   +  +G
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A R +++M+S+ I+PT    N M+ G+  S        F E M S G   D ++YN
Sbjct: 555 HLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYN 614

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKN--IEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           T+I G+ + + M +A  L  +M+EK   + P V +Y +++ G+    +  +A  +  +M 
Sbjct: 615 TLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI 674

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              V P+  TYT+L+ G      + E  +   EM++R   P D
Sbjct: 675 ERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 137/544 (25%), Positives = 261/544 (47%), Gaps = 19/544 (3%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL----GRVG 70
           R  VP    N +  VL  A     A + +R V      + D E +   + I+     +  
Sbjct: 117 RVPVPASASNALLAVLSRAGWPHLAQEAYRLV-----LSSDSEVNAYTLNIMVHSYCKTL 171

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           + + A  ++ +M K+ V  D     VLI++  + G V  ++ + D M   G++  + +Y+
Sbjct: 172 EFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYN 231

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
           ++ K + +  R+  AK  F  M    + P   ++N+++ GF    +++ A++F+++M+ R
Sbjct: 232 SVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHR 291

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
            ++ DVV+++ +I  ++R  +MD A     EMK   + P  + YT +I G+       +A
Sbjct: 292 YVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA 351

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           LR+ DEM  F   P+ VTY  LL GLC   ++++ +K+L EM ER + P D   F  L+ 
Sbjct: 352 LRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP-DLCTFTTLIH 410

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             C+ G+   A  +   ++R  +  +   Y  LI+  C+     +A +L D +  +EI+ 
Sbjct: 411 GYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREIL- 469

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGN 429
            P         +Y+ +I   C  GQ   A  F  +++KKG L  +  +N++I+G+ + GN
Sbjct: 470 -PNHI------TYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGN 522

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
                + ++ M +  V  D   +  LI  Y+++     A    + M ++   P +  +  
Sbjct: 523 VKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNM 582

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++    E G +Q A RV K M + G++ +      ++   +  G+ ++A    D M+  G
Sbjct: 583 IINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRG 642

Query: 550 SVPN 553
             P+
Sbjct: 643 FAPD 646



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 257/553 (46%), Gaps = 15/553 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++LI +Y +    +E+ + F ++    V     + +AL  ++ R G   +A+  +  +
Sbjct: 89  VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLV 148

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS   E   +T N+M+  +  +L+ + A     +M+ R +  DVVT+N +I+   R   +
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDV 208

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D A  L   M  + ++P +++Y +++KG     R D A  +F  M    V P+  ++  L
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNIL 268

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G++ E  K  +EM  RY+ P D   F  L+G+  + G ++ A   L+ M  L 
Sbjct: 269 IGGFCRVGEVKEAVKFYKEMQHRYVTP-DVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   Y ++I  FC+A     A+++ D++V    +         +  +YN ++  LC 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCL--------PDVVTYNTLLNGLCK 379

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +   AE    ++ ++GV  D   F  LI G+ ++GN ++A ++   + R+ +  D   
Sbjct: 380 QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVT 439

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+   RKG+ A A    D M      P    +  +++S  E G+V+ A   +  MV
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMV 499

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           +KG   N+     I++     G+V++    +  M Q    P+   F++L+    ++    
Sbjct: 500 KKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMH 559

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKL 627
            A  + +         D  +Y  +++     G   +A  + FK M   G+  D  +   L
Sbjct: 560 GAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRV-FKGMGDSGIEPDRYTYMSL 618

Query: 628 IAGLNQEGNTKQA 640
           I G    GN+KQA
Sbjct: 619 INGHVTAGNSKQA 631



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 129/282 (45%), Gaps = 35/282 (12%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L +  +L  A  +L +M ++GV  D   F  LI  Y ++G  + ++++F
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLF 425

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKR--------------------------- 147
           D + +  +   V +Y++L   + R+G    A                             
Sbjct: 426 DTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEK 485

Query: 148 --------YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                   + ++M+ +G  P   TYN ++ G+  S  ++   +F + M+   +  D++T+
Sbjct: 486 GQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITF 545

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+I+GY + + M  A  +F  M+++ + P  ++Y  +I G+       DA R+F  M  
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGD 605

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             ++P+  TY +L+ G   AG   +  ++  EM+ R   P D
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDD 647



 Score = 42.4 bits (98), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 102/264 (38%), Gaps = 21/264 (7%)

Query: 398 KAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           + EI    L       P  F+ LIR +++   P  AFE  +++    VP  A A   L+ 
Sbjct: 71  RREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLA 130

Query: 458 SYLRKGEPADAKTA----LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
              R G P  A+ A    L S  E      + +  S  ++L  DG    A  V+  M ++
Sbjct: 131 VLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDG----ADTVISEMEKR 186

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS--------EKG 565
            V  ++     +++A    G V+ A+  +D M   G  P   +  SVL         +K 
Sbjct: 187 CVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKA 246

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           K +   + +D C       D+ S+  ++      G+   A     ++  +    D  S  
Sbjct: 247 KEV--FRTMDQC---SVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFS 301

Query: 626 KLIAGLNQEGNTKQADILSRMIRG 649
            LI   ++ G    A    R ++G
Sbjct: 302 CLIGLFSRRGEMDHAGAYLREMKG 325


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/616 (24%), Positives = 287/616 (46%), Gaps = 13/616 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+V   L  A   + A +  + +++ GL   D  T+  +I+  G+  +   A+ +L +M
Sbjct: 274 YNVVIGGLCRAGEVDEAFELKKLMDKKGLV-ADVFTYSILIDGFGKQKRCTEAKLMLEEM 332

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG++     +  LI+ + ++G   E+ ++ + M   GV+ ++ +Y+AL K + + G  
Sbjct: 333 FSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDM 392

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A    N+M+  GI+P   TYN M+ G+              +MK   +     T   +
Sbjct: 393 EKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMI 452

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING  R   +++A ++F  M    ++P  + YTT+IKG+V   R  +A+RI   M    V
Sbjct: 453 INGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGV 512

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P+ + Y +++ GLC + KM E +  L EM+ER + P +   +  L+   CKSG +  A 
Sbjct: 513 QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKP-NVYTYGALIHGYCKSGEMQVAD 571

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
              K M+   I         LI+ +CK      A  +   ++ + +   P      +  +
Sbjct: 572 RYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSV--HP------DVRT 623

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y+ +I  L  NG+   A     + ++KG++ D   +N++I G  K+G    AF++ + M 
Sbjct: 624 YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           ++G+  +   Y  LI    + GE   A+   D +   G +  +  + ++++   + G + 
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLS 743

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--SVPNFDSLLS 559
            A R+   M  KGV  +  + + +++     G+ E+AL      +Q G  S  + ++L+ 
Sbjct: 744 KAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMD 803

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
              + GK I A +LL+  + +    D  +Y  ++D     G    A      + ++  + 
Sbjct: 804 GFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMP 863

Query: 620 DWKSSDKLIAGLNQEG 635
           +  +   L++G N  G
Sbjct: 864 NALTYTALLSGYNMAG 879



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/594 (24%), Positives = 263/594 (44%), Gaps = 14/594 (2%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           HD  T+  +I    R G     + +L +M +KG       + V+I    + G V E+ ++
Sbjct: 234 HDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFEL 293

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
             +M + G+   V +Y  L     ++ R   AK    +M S+G++P    Y  ++ GF  
Sbjct: 294 KKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMR 353

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
                 A R  E+M +RG+ L++ TYN ++ G  +F  M++A+ L  EM    I+P   +
Sbjct: 354 QGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQT 413

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y  MI+GY+  +       +  EMK  ++ P A T   ++ GLC  G + +  +V   MV
Sbjct: 414 YNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMV 473

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
              + P +  ++  L+    + G    A  +LK M +  +  +   Y  +I   CK+   
Sbjct: 474 SLGVKP-NAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKM 532

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           + A   L +++E+   L+P         +Y  +I   C +G+   A+ +F++++  G+  
Sbjct: 533 EEAKDYLVEMIERG--LKPN------VYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAP 584

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           + V    LI G+ KEG+   A  I + M  R V  D   Y  LI   LR G+   A   L
Sbjct: 585 NDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELL 644

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
              +E G  P    + S++    + G +  A ++ + M +KG+  N+     ++  L   
Sbjct: 645 SEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKA 704

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G +E A    D +   G   N   + +++    + G    A +L D    +    D   Y
Sbjct: 705 GEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVY 764

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
             ++D     G T  A S+  + ++K G     S + L+ G  + G   +A+ L
Sbjct: 765 SALIDGCRKEGNTEKALSLFLESVQK-GFASTSSLNALMDGFCKSGKVIEANQL 817



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 258/562 (45%), Gaps = 13/562 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +FE+LI+ Y KKG+  E+V  F   K+ G    +   + L   +L+  +  +  R++N M
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L   +    +TY  ++   F +   +   R   +M+ +G S  +VTYN +I G  R  ++
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEV 287

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           DEA +L   M +K +   V +Y+ +I G+   +R  +A  + +EM S  +KP  V YTAL
Sbjct: 288 DEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTAL 347

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G    G   E  +V  EM+ R +     +    + GV CK G +  A  +L  MI + 
Sbjct: 348 IDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGV-CKFGDMEKADALLNEMIMVG 406

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I  +   Y  +IE + K +   R   LL ++         +S L   A +   +I  LC 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM--------KKSNLVPTAYTCGMIINGLCR 458

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           +G    A   F  ++  GV  + V +  LI+GH +EG    A  I+K+M ++GV  D   
Sbjct: 459 HGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLC 518

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  +I    +  +  +AK  L  MIE G  P    + +++    + G +Q A R  K M+
Sbjct: 519 YNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML 578

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
             G+  N  +   +++     G   EA      M+     P+   + +L+  L   GK  
Sbjct: 579 GCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQ 638

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A++LL   L +  + D+ +Y  ++      G    A+ +   + +KG   +  + + LI
Sbjct: 639 GAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALI 698

Query: 629 AGLNQEGNTKQADILSRMIRGE 650
            GL + G  ++A  L   I G+
Sbjct: 699 NGLCKAGEIERARELFDGIPGK 720



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 133/589 (22%), Positives = 268/589 (45%), Gaps = 13/589 (2%)

Query: 62   MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
            +I  L R G +  A  +   M   GV+ +  ++  LI+ + ++G  QE+V+I  +M + G
Sbjct: 452  IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511

Query: 122  VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            V+  V  Y+++   + +  +   AK Y  +M+  G++P  +TY  ++ G+  S +++ A 
Sbjct: 512  VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVAD 571

Query: 182  RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            R+F++M   GI+ + V    +I+GY +     EA  +F  M  +++ P V +Y+ +I G 
Sbjct: 572  RYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGL 631

Query: 242  VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
            +   +   A+ +  E     + P+  TY +++ G C  G + +  ++   M ++ I P +
Sbjct: 632  LRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISP-N 690

Query: 302  NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
               +  L+   CK+G +  A ++   +    +   A  Y  +I+ +CK+    +A +L D
Sbjct: 691  IITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFD 750

Query: 362  KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
            ++  K +   P S +      Y+ +I      G T KA   F + ++KG     + N L+
Sbjct: 751  EMTLKGV--PPDSFV------YSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALM 802

Query: 422  RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
             G  K G    A ++++ M  + V  D   Y  LI+ + + G   +A+     M +    
Sbjct: 803  DGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLM 862

Query: 482  PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
            P +  + +++      GR      +   M+ K ++ +    + +++A L  G   + L  
Sbjct: 863  PNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKL 922

Query: 542  IDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
            +D M++ G   S      L+  L  K      +K+L+    +   + LA+   ++     
Sbjct: 923  VDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHK 982

Query: 599  AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
            AGK   A  +L  ++    V D    + LI       +++ A D L +M
Sbjct: 983  AGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/516 (22%), Positives = 216/516 (41%), Gaps = 79/516 (15%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           V +  +I+GY +    DEA   F   K       ++    ++   +   + +   R ++ 
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M   +V  +  TYT L+     AG   E +++L EM E+   P     +  ++G  C++G
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSP-SLVTYNVVIGGLCRAG 285

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA-----------EMYDRAIK------- 358
            ++ A ++ K M +  +  +   Y ILI+ F K            EM+ + +K       
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345

Query: 359 -LLDKL-----------VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            L+D             V++E++ R    + +   +YN +++ +C  G   KA+    ++
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLAR---GVKLNLFTYNALVKGVCKFGDMEKADALLNEM 402

Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYIC--LIESYLRK 462
           +  G+  D   +NN+I G+ KE N     +++  M +   VP    AY C  +I    R 
Sbjct: 403 IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPT---AYTCGMIINGLCRH 459

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK-------------- 508
           G   DA    + M+  G  P + ++ ++++   ++GR Q A R++K              
Sbjct: 460 GSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCY 519

Query: 509 ---------------------SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
                                 M+E+G+K N+     ++      G ++ A      M+ 
Sbjct: 520 NSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLG 579

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  PN     +L+    ++G T  A  +    LGR    D+ +Y  ++  LL  GK   
Sbjct: 580 CGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQG 639

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           A  +L + +EKG V D  + + +I+G  ++G   +A
Sbjct: 640 AMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKA 675



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 173/362 (47%), Gaps = 6/362 (1%)

Query: 15   RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
            + LVP  F +N + +          A Q   ++ + G+ + +  T+  +I  L + G++ 
Sbjct: 650  KGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGI-SPNIITYNALINGLCKAGEIE 708

Query: 74   HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
             AR +   +P KG+  +   +  +I+ Y K G + ++ ++FD M   GV      Y AL 
Sbjct: 709  RARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALI 768

Query: 134  KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
                + G    A   F + + +G   T  + N ++ GF  S K+  A +  EDM  + + 
Sbjct: 769  DGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVK 827

Query: 194  LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
             D VTY  +I+ + +   + EAE+ F +M+++N+ P  ++YT ++ GY    R  +   +
Sbjct: 828  PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFAL 887

Query: 254  FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
            FDEM + D++P+ VT++ ++      G  V+  K++ +M+++      N V   L+   C
Sbjct: 888  FDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKN-VCHVLIDPLC 946

Query: 314  KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
            +  H++    VL+ +    +         L+  F KA   D A ++L  +V  + +  P 
Sbjct: 947  RKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWV--PD 1004

Query: 374  ST 375
            ST
Sbjct: 1005 ST 1006


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 157/652 (24%), Positives = 295/652 (45%), Gaps = 51/652 (7%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           AW    + ++R L+      LV  VL    +   AL FF W +R   ++H    +  M++
Sbjct: 149 AWNPNFEGRLRHLLRSLKPPLVCAVLRSQADERVALNFFYWADRQWRYSHHPVVYYTMLD 208

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           +L +      AR +L  M ++G++   + F  ++ SY + G ++ ++++  +M++ GVE 
Sbjct: 209 VLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEP 268

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+   +    ++++ G+   A ++  +M   GI+P   TYN ++ G+    ++E A+   
Sbjct: 269 SLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELI 328

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK-EKNIEPTVISYTTMIK---- 239
             + S+G   D V+Y T++    + KK++E + L  +M    N+ P  ++Y T+I     
Sbjct: 329 AGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSK 388

Query: 240 ------------------------GYVAV-------ERADDALRIFDEMKSFDVKPNAVT 268
                                   GY A+        R D+A  +  +M S    P+ VT
Sbjct: 389 HGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVT 448

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           YTA++ G C  G++ E +K+L++M +    P   S +  LL   C SG    A +++   
Sbjct: 449 YTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVS-YTALLNGLCHSGKSLEAREMINVS 507

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
                   A  YG ++    +      A  L  ++VEK     P           N +IQ
Sbjct: 508 EEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEI--------NLLIQ 559

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC N +  +A+ +  + + KG  ++ V F  +I G  + G+ ++A  ++  M   G   
Sbjct: 560 SLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHP 619

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           DA  Y  L ++  +KG   +A   +  M+  G  P    +RSV+    + GRV     ++
Sbjct: 620 DAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLL 679

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEK 564
           + M+++  +    +  +++E L   G++EEA   LG++              L+    +K
Sbjct: 680 EKMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKK 737

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           G  I+A K+      R+   DL   EKV   L+  GK + A +++ + +E+G
Sbjct: 738 GVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERG 789


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 225/479 (46%), Gaps = 10/479 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R+  ++ A  +   M K G+Q D   F  LI     +G ++ +V++++ M + G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E  V SY+ L   +   G   MA   F KM   G +P   TYN ++        +  A+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            F  +M  RGI  D +TYN++++G     +++EA +LF  M++   +P V++Y  +I   
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 +DA     EM    + P+ VTYT +L GLC  G++ E  ++ ++M ++   P D
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP-D 372

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++   CK   +N A + L  M+   IP  A  Y  ++  FC     D A +L  
Sbjct: 373 VVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFK 432

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNL 420
           ++V + ++    +TL     +++ ++  LC  G   +A   F  + +KGV   +  +N L
Sbjct: 433 EMVGRNVM---PNTL-----TFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNAL 484

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G+      + A ++ +IM  +G   D  +Y  LI  Y        AK  L  M     
Sbjct: 485 MNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL 544

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           +P +  + ++M+ L   GR+  A  + K M   G+   L   + +L  L   GH++EAL
Sbjct: 545 TPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEAL 603



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 237/477 (49%), Gaps = 11/477 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L  + N+  A+  F+ +E+ G    +  T+  +I+ L +   +N A   L +M
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGC-KPNVVTYNTIIDSLCKDRLVNDAMDFLSEM 259

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  D   +  ++      G + E+ ++F  M+Q G +  V +Y+ +   + +    
Sbjct: 260 VGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLV 319

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A  + ++M+ +GI P   TY  +L G     +L  AIR F+ M+ +G   DVV YNT+
Sbjct: 320 NDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTI 379

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+   + + +++A +  +EM ++ I P  ++Y+T++ G+  + + D+A ++F EM   +V
Sbjct: 380 IDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNV 439

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN +T++ L+ GLC  G + E + V   M E+ + P +   +  L+   C    +N A 
Sbjct: 440 MPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEP-NIYTYNALMNGYCLRCKMNEAR 498

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V + M+      +   Y ILI  +C +   D+A  LL ++  K+  L P +       +
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK--LTPNTV------T 550

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN +++ LC+ G+   A+  F+++   G+L  +  ++ L+ G  K G+ D A ++ K M 
Sbjct: 551 YNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMK 610

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            + +  D   Y  LIE     G+   AK     +  DG  P    +  +++ L ++G
Sbjct: 611 EKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEG 667



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/599 (23%), Positives = 275/599 (45%), Gaps = 16/599 (2%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQES 110
           + R + ++  + LG + K+     ++     M   GV        +LI    +   V  +
Sbjct: 88  NPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFA 147

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           V ++  M +LG++  V ++  L   +   G+  +A   +N+M+  G EP   +YN ++ G
Sbjct: 148 VSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLING 207

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
              S     A+  F+ M+  G   +VVTYNT+I+   + + +++A    +EM  + I P 
Sbjct: 208 LCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPD 267

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
            I+Y +++ G   + + ++A R+F  M+    KP+ VTY  ++  L     + +    L 
Sbjct: 268 AITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLS 327

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           EMV++ IPP D   +  +L   C  G LN A  + K M +     +   Y  +I++ CK 
Sbjct: 328 EMVDQGIPP-DVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKD 386

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
            + + A++ L ++V++ I   P +     A +Y+ ++   C+ GQ  +A   F++++ + 
Sbjct: 387 RLVNDAMEFLSEMVDRGI---PPN-----AVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           V+ + + F+ L+ G  +EG    A  + + M  +GV  +   Y  L+  Y  + +  +A+
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              + M+  G +P    +  ++       R+  A  ++  M  K +  N      I++ L
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558

Query: 530 LMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
              G + +A      M  SG +P    +  LL+ L + G    A+KL      +    D+
Sbjct: 559 CYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDI 618

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
             Y  +++ +   GK   A  +  K+   G     ++ + +I GL +EG + +A  L R
Sbjct: 619 ILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFR 677



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 163/337 (48%), Gaps = 5/337 (1%)

Query: 29  VLHGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           +LHG         A++ F+ +E+ G    D   +  +I+ L +   +N A   L +M  +
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGC-KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR 402

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G+  +   +  ++  +   G + E+ ++F  M    V  +  ++  L   + + G    A
Sbjct: 403 GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEA 462

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
           +  F  M  +G+EP  +TYN ++ G+ L  K+  A + FE M  +G + D+ +YN +ING
Sbjct: 463 RWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILING 522

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
           Y   ++MD+A+ L  +M  K + P  ++Y T++KG   V R  DA  +F +M S  + P 
Sbjct: 523 YCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPT 582

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            +TY+ LL GLC  G + E  K+ + M E+ + P D  ++  L+      G L  A  + 
Sbjct: 583 LMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEP-DIILYTILIEGMFIGGKLEVAKGLF 641

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +    I      Y ++I+   K  + D A +L  K
Sbjct: 642 SKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/501 (21%), Positives = 210/501 (41%), Gaps = 48/501 (9%)

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           ++ ++ A+  F  M        +V +   +    + K+      L  +M    +  TV S
Sbjct: 71  TISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYS 130

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
              +I     +   D A+ ++ +M    ++P+ +T+T L+ G+C+ GK+    ++  EMV
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMV 190

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
                P D   +  L+   C SG+ N A  V K M +         Y  +I++ CK  + 
Sbjct: 191 RSGHEP-DVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLV 249

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-- 411
           + A+  L ++V + I   P      +A +YN ++  LC  GQ  +A   F+++ + G   
Sbjct: 250 NDAMDFLSEMVGRGI---PP-----DAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKP 301

Query: 412 ----------------------------------LDPVAFNNLIRGHSKEGNPDSAFEIV 437
                                              D V +  ++ G    G  + A  + 
Sbjct: 302 DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLF 361

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           K M ++G   D  AY  +I+S  +     DA   L  M++ G  P +  + +++      
Sbjct: 362 KKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNL 421

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G++  A+++ K MV + V  N    + +++ L   G V EA    + M + G  PN   +
Sbjct: 422 GQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTY 481

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
           ++L++    + K   A K+ +  +G+ C  DL SY  +++    + +   A ++L ++  
Sbjct: 482 NALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSV 541

Query: 615 KGGVTDWKSSDKLIAGLNQEG 635
           K    +  + + ++ GL   G
Sbjct: 542 KKLTPNTVTYNTIMKGLCYVG 562


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 151/636 (23%), Positives = 289/636 (45%), Gaps = 71/636 (11%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEIL---GRVGKLNHARCIL-------------LDM 82
           AL F  W+ +   + H   ++  ++ +L   G VG +   R ++             LD+
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDL 165

Query: 83  PKKGVQWDE----------DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
            +K +  DE            +  L+ S  + G+V E  +++  M +  V  ++ +Y+ +
Sbjct: 166 CRK-MNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKM 224

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
                + G    A +Y +K++  G++P   TY  ++ G+     L++A + F +M  +G 
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC 284

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             + V Y  +I+G    +++DEA  LF +MK+    PTV +YT +IK     ER  +AL 
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +  EM+   +KPN  TYT L+  LC   K  + +++L +M+E+ + P +   +  L+   
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP-NVITYNALINGY 403

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           CK G +  A DV++ M    +      Y  LI+ +CK+ ++ +A+ +L+K++E++++   
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVL--- 459

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPD 431
                 +  +YN +I   C +G    A      +  +G++ D   + ++I    K    +
Sbjct: 460 -----PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A ++   + ++GV  +   Y  LI+ Y + G+  +A   L+ M+     P S  F +++
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
             L  DG+++ A+ + + MV+ G++  +     ++  LL  G  + A  R   M+ SG+ 
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
           P                                D  +Y   +      G+ L+A  ++ K
Sbjct: 635 P--------------------------------DAHTYTTFIQTYCREGRLLDAEDMMAK 662

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           + E G   D  +   LI G    G T  A D+L RM
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 145/595 (24%), Positives = 266/595 (44%), Gaps = 26/595 (4%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+ KM+    ++G +  A   +  + + G+  D   +  LI  Y ++  +  + K+F+ M
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G  R+  +Y  L   +    R   A   F KM  +   PT  TY V++     S + 
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+   ++M+  GI  ++ TY  +I+      K ++A +L  +M EK + P VI+Y  +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY      +DA+ + + M+S  + PN  TY  L+ G C +  + +   VL +M+ER +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKV 458

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  L+  QC+SG+ ++A  +L  M    +  +   Y  +I++ CK++  + A 
Sbjct: 459 LP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            L D L +K +   P   +      Y  +I   C  G+  +A +   +++ K  L + + 
Sbjct: 518 DLFDSLEQKGV--NPNVVM------YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN LI G   +G    A  + + M + G+         LI   L+ G+   A +    M+
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P +  + + +++   +GR+  A  +M  M E GV  +L   + +++     G   
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689

Query: 537 EALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
            A   +  M  +G  P+  + LS++           LL+   G+         E  L A+
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKH---------LLEMKYGKQ-----KGSEPELCAM 735

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGE 650
               +      +L K++E     + KS +KLI G+ + GN + A+ +   M R E
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 135/580 (23%), Positives = 255/580 (43%), Gaps = 74/580 (12%)

Query: 30  LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
           L G++    AL   + +E  G+   +  T+  +I+ L    K   AR +L  M +KG+  
Sbjct: 333 LCGSERKSEALNLVKEMEETGI-KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           +   +  LI  Y K+G+++++V + ++M+   +  + ++Y+ L K   +   +  A    
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVL 450

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
           NKML   + P   TYN ++ G   S   ++A R    M  RG+  D  TY +MI+   + 
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
           K+++EA  LF  +++K + P V+ YT +I GY    + D+A  + ++M S +  PN++T+
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPK---DNSVFMKLLGVQCKSGHLNAAADVLK 326
            AL+ GLC  GK+ E   +  +MV+  + P    D  +  +LL    K G  + A    +
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL----KDGDFDHAYSRFQ 626

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+      +A  Y   I+ +C      R  +LLD   E  +    ++ +  +  +Y+ +
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYC------REGRLLD--AEDMMAKMRENGVSPDLFTYSSL 678

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIR-------GHSKEGNP------- 430
           I+     GQT  A    +++   G  +P    F +LI+       G  K   P       
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGC-EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737

Query: 431 ----DSAFEIVKIMGRRGVPRDADAY------IC-------------------------- 454
               D+  E+++ M    V  +A +Y      IC                          
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797

Query: 455 ----LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
               L+    +  +  +A   +D MI  GH P     + ++  L++ G  +  + V +++
Sbjct: 798 VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           ++ G  E+      I++ +  +G VE      ++M ++G 
Sbjct: 858 LQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGC 897



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 197/458 (43%), Gaps = 64/458 (13%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+   R G  + A  +L  M  +G+  D+  +  +I+S  K   V+E+  +F
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D ++Q GV  +V  Y AL     + G+   A     KMLS+   P   T+N ++ G    
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580

Query: 175 LKLETAIRF-----------------------------------FEDMKSRGISLDVVTY 199
            KL+ A                                      F+ M S G   D  TY
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            T I  Y R  ++ +AE + A+M+E  + P + +Y+++IKGY  + + + A  +   M+ 
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700

Query: 260 FDVKPNAVTYTALL---------------PGLCDAGKMVE---VQKVLREMVERYIPPKD 301
              +P+  T+ +L+               P LC    M+E   V ++L +MVE  + P  
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 760

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIR-LSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
            S    +LG+ C+ G+L  A  V   M R   I      +  L+   CK + ++ A K++
Sbjct: 761 KSYEKLILGI-CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           D ++   +   PQ        S   +I  L   G+  +    F+ L++ G   D +A+  
Sbjct: 820 DDMI--CVGHLPQ------LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKI 871

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           +I G  K+G  ++ +E+  +M + G    +  Y  LIE
Sbjct: 872 IIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/164 (20%), Positives = 76/164 (46%), Gaps = 1/164 (0%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLI 136
           +L  M +  V  +   +E LI    + G ++ + K+FD M +  G+  S   ++AL    
Sbjct: 747 LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            +  ++  A +  + M+  G  P   +  V++ G +   + E     F+++   G   D 
Sbjct: 807 CKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDE 866

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           + +  +I+G  +   ++   +LF  M++   + +  +Y+ +I+G
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 265/569 (46%), Gaps = 32/569 (5%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F+ LI SY        +          G   SV +Y+A+  L L       A+R+ + ML
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVL-LALSDASLPSARRFLSSML 144

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+ P  +TYN+++       +LE A+    DM+  G + + VTYNT++  + R  ++D
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 214 EAEKLFAEMKEK-NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            AE++ + M+E+ N +P ++++ +M+ G     R + A ++FDEM    + P+ V+Y  L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           L G C  G + E   V  EM +R + P D   F  L+   CK+G+L  A  ++  M    
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVP-DVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      +  LI+ FCK    D A+  ++++  ++  ++P          YN +I   C 
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEM--RKCGIQPSVV------CYNALINGYCK 375

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+   A    R++  K V  D V ++ +I G+ K GN DSAF++ + M ++GV  DA  
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI     +    DA    ++M++ G  P    + ++++   ++G V+ A  +   M+
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
            KGV  ++   + ++  L      +EA   +  +     VP+   +D+L+   S K +  
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS-KAEFK 554

Query: 569 AAVKLL-DFC---------------LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
           + V LL  FC               L R+  +D + Y  ++      G    A S   ++
Sbjct: 555 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 614

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           +  G   +  S+  L+ GL +EG   +AD
Sbjct: 615 LRSGFSPNSTSTISLVRGLFEEGMVVEAD 643



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 250/521 (47%), Gaps = 29/521 (5%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
             L  AR  L  M + GV  +   + +L+ +   +G ++E+V +   M+  G   +  +Y
Sbjct: 131 ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTY 190

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           + L     R G    A+R  + M  EG  +P   T+N M+ G   + ++E A + F++M 
Sbjct: 191 NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 250

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             G++ DVV+YNT+++GY +   + E+  +F+EM ++ + P V+++T++I         +
Sbjct: 251 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLE 310

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A+ +  +M+   ++ N VT+TAL+ G C  G + +    + EM +  I P     +  L
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP-SVVCYNAL 369

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   CK G ++ A ++++ M    +  +   Y  +I  +CK    D A +L  K+++K +
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
           +         +A +Y+ +I+ LC   +   A   F  +++ GV  D   +  LI GH KE
Sbjct: 430 L--------PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKE 481

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP----- 482
           GN + A  +   M R+GV  D   Y  LI    +     +A   L  +  +   P     
Sbjct: 482 GNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY 541

Query: 483 -------ASSLFRSV---MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
                  + + F+SV   ++     G ++ A +V +SM+++  K +  + + ++      
Sbjct: 542 DALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRG 601

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSV---LSEKGKTIAA 570
           G+V +AL     M++SG  PN  S +S+   L E+G  + A
Sbjct: 602 GNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 205/429 (47%), Gaps = 13/429 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   M+  L + G++  AR +  +M ++G+  D   +  L+  Y K G + ES+ +F  M
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            Q G+   V ++ +L     + G    A     +M   G+     T+  ++ GF     L
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+   E+M+  GI   VV YN +INGY +  +MD A +L  EM+ K ++P V++Y+T+
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY  V   D A ++  +M    V P+A+TY++L+ GLC+  ++ +  ++   M++  +
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  L+   CK G++  A  +   MIR  +  +   Y +LI    K+     A 
Sbjct: 465 QP-DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 358 KLLDKLVEKEIILRPQS---------TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +LL KL  ++ +  P +             E  S   +++  C  G   +A+  ++ ++ 
Sbjct: 524 RLLFKLYHEDPV--PDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +   LD   ++ LI GH + GN   A    K M R G   ++ + I L+     +G   +
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 641

Query: 468 AKTALDSMI 476
           A  A+  ++
Sbjct: 642 ADNAIQDLL 650



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 187/391 (47%), Gaps = 31/391 (7%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           +L  F  + + GL   D  T   +I    + G L  A  ++  M ++G++ +E  F  LI
Sbjct: 277 SLAVFSEMTQRGLVP-DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + + KKG + +++   + M++ G++ SV  Y+AL     + GR  +A+    +M ++ ++
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TY+ ++ G+     L++A +  + M  +G+  D +TY+++I G    K++++A +L
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M +  ++P   +YTT+I G+      + AL + DEM    V P+ VTY+ L+ GL  
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 515

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           + +  E  ++L ++     P  DN  +  L+ + C      +   +LK            
Sbjct: 516 SARTKEAHRLLFKLYHE-DPVPDNIKYDALM-LCCSKAEFKSVVALLKG----------- 562

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
                   FC   +   A K+   ++++           ++ S Y+ +I   C  G   K
Sbjct: 563 --------FCMKGLMKEADKVYQSMLDR--------NWKLDGSVYSILIHGHCRGGNVRK 606

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
           A  F +Q+++ G   +  +  +L+RG  +EG
Sbjct: 607 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 155/652 (23%), Positives = 295/652 (45%), Gaps = 51/652 (7%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           AW    + ++R L+     +LV  VL    +   AL FF W +R   ++H    +  +++
Sbjct: 145 AWNPNFEGRLRHLLRSLKPSLVCAVLRSQADERVALNFFYWADRQWRYSHHPLVYYTLLD 204

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           +L +      AR +L  M ++G++   + F  ++ SY + G ++ ++++  +M++ GVE 
Sbjct: 205 VLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEP 264

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           ++   +    ++++  +   A R+  +M   GI+P   TYN ++ G+    ++E A+   
Sbjct: 265 NLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELI 324

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIK---- 239
             + S+G   D V+Y T++    + KK+++ + L  +M ++ N+ P  ++Y T+I     
Sbjct: 325 AGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSK 384

Query: 240 ------------------------GYVAV-------ERADDALRIFDEMKSFDVKPNAVT 268
                                   GY A+        R D+A  +  +M S    P+ VT
Sbjct: 385 HGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVT 444

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           YTA++ G C  G++ E +K+L++M +    P   S +  LL   C SG    A +++   
Sbjct: 445 YTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVS-YTALLNGLCHSGKSLEAREMINVS 503

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
                   A  YG+++  F +      A  L  ++VEK     P           N +IQ
Sbjct: 504 EEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEI--------NLLIQ 555

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC N +  +A+ +  + + KG  ++ V F  +I G  + G+ ++A  +++ M       
Sbjct: 556 SLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHP 615

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           DA  Y  L ++  +KG   +A   +  M+  G  P    FRSV+    + GRV     ++
Sbjct: 616 DAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLL 675

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEK 564
             MV++  K    +   ++E L   G++EEA   LG++              L+    +K
Sbjct: 676 DRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKK 733

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           G  ++A K+      R+   DL   EKV   L+  G  + A  ++ + +E+G
Sbjct: 734 GVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERG 785


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 179/696 (25%), Positives = 305/696 (43%), Gaps = 65/696 (9%)

Query: 26  VYNVLHGAKNSEHALQFFRWVER---AGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +YNVL  +   E  +    W+ +   A   + +  T   +I +L   G L+ AR +   M
Sbjct: 23  LYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKM 82

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           P+KG + +E  F +L+  Y + G   + +++   M++LG   +   Y+ L     + G+ 
Sbjct: 83  PEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKT 142

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI----SLDVVT 198
             A++  ++M  +G+ P   T+N  +     S K+  A R F DM+   +      +++T
Sbjct: 143 DDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIIT 202

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMK----------------------------------- 223
           YN M+ G+ +   ++EA  LF +MK                                   
Sbjct: 203 YNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMV 262

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           +  +EP V SY  ++ G        DA  +   M S  V P+ VTYT LL G C  GK+ 
Sbjct: 263 DMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVS 322

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E   VLREM+     P + +  + L  +  K G ++ A ++L+ M       +     I+
Sbjct: 323 EANNVLREMMRDGCSPNNYTCNILLYSLW-KEGRISEAEELLQKMNEKGYVIDTVTCNIV 381

Query: 344 IENFCKAEMYDRAIKL-----------LDKLVEKEIIL------RPQSTLDMEASSYNPM 386
           I+  C     D+AI++           L  L    I L      R +   D+   SY+ +
Sbjct: 382 IDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDL--ISYSTI 439

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC  G+ G+A+  F ++M K +  D   ++  I    KEG   SAF ++K M ++G 
Sbjct: 440 ISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGC 499

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
            +    Y  LI     K +  +    +D M E G SP  S++ +V+ SL E GRV+ A  
Sbjct: 500 NKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPS 559

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVE--EALGRIDLMMQSGSVPNFDSLLSVLSE 563
           V+  M++KG+  N+   + +++A          + +  I L +       +    + L  
Sbjct: 560 VLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLV 619

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+ + A +L +  L R   +    Y+ ++D L    K  +A  IL K+++KG   D  S
Sbjct: 620 GGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPAS 679

Query: 624 SDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKEK 659
              +I GL + GN  +AD L+  +    S G  K K
Sbjct: 680 FMPVIDGLGKRGNKHEADELAEKMMEMASEGKVKNK 715



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 137/566 (24%), Positives = 250/566 (44%), Gaps = 53/566 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+  Y+ L +   + GR          M++ G+ P  +T+NV++     S  L+ A   F
Sbjct: 20  SIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELF 79

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           + M  +G   +  ++  ++ GY R     +  +L  EM+     P  + Y T+I  +   
Sbjct: 80  DKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKE 139

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV--ERYIPPKDN 302
            + DDA ++ DEM+   + P+ VT+ A +  LC +GK++E  ++ R+M   E    P+ N
Sbjct: 140 GKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPN 199

Query: 303 SVFMKL-LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD---RAIK 358
            +   L LG  CK G L  A  + + M ++S            EN    E Y+     + 
Sbjct: 200 IITYNLMLGGFCKEGMLEEARALFEKM-KVS------------ENLMNRESYNIWLLGLV 246

Query: 359 LLDKLVEKEIILRPQSTLDMEAS--SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
            + KL+E +++L+    + ME +  SYN ++  LC NG    A +  R +   GVL D V
Sbjct: 247 RIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTV 306

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC--LIESYLRKGEPADAKTALD 473
            +  L+ G+   G    A  +++ M R G     + Y C  L+ S  ++G  ++A+  L 
Sbjct: 307 TYTTLLHGYCHTGKVSEANNVLREMMRDGC--SPNNYTCNILLYSLWKEGRISEAEELLQ 364

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE--NL------------ 519
            M E G+   +     V++ L  +G++  A  ++  M   G     NL            
Sbjct: 365 KMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSD 424

Query: 520 -------DLV--AKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
                  DL+  + I+  L   G V EA  +   MM     P+   +D  +    ++GK 
Sbjct: 425 SRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKI 484

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
            +A ++L     + C   L +Y  ++  L +  +    Y ++ ++ E+G   D    + +
Sbjct: 485 SSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNV 544

Query: 628 IAGLNQEGNTKQA-DILSRMIRGEMS 652
           ++ L + G  K A  +L  M++  +S
Sbjct: 545 LSSLCEGGRVKDAPSVLDEMLQKGIS 570



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 115/509 (22%), Positives = 206/509 (40%), Gaps = 99/509 (19%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNH--------DRETHLKMIEILGRVGKLNHAR 76
           + YN++ G    E  L+     E   LF          +RE++   +  L R+GKL  A+
Sbjct: 201 ITYNLMLGGFCKEGMLE-----EARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQ 255

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            +L +M   G++ +   + ++++   K G++ ++  +  +M   GV     +Y  L    
Sbjct: 256 LVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGY 315

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
              G+   A     +M+ +G  P  +T N++L+  +   ++  A    + M  +G  +D 
Sbjct: 316 CHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDT 375

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEM-----------------------KEKNIEPTVIS 233
           VT N +I+G     K+D+A ++   M                         K   P +IS
Sbjct: 376 VTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLIS 435

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR--- 290
           Y+T+I G     R  +A + F EM   +++P++  Y   +   C  GK+    +VL+   
Sbjct: 436 YSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDME 495

Query: 291 --------------------------------EMVERYIPPKDNSVFMKLLGVQCKSGHL 318
                                           EM ER + P D S++  +L   C+ G +
Sbjct: 496 KKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSP-DVSIYNNVLSSLCEGGRV 554

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKA-------EMYDRAIKLL----------- 360
             A  VL  M++  I      + ILI+ FCKA       E+++ A+ +            
Sbjct: 555 KDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTF 614

Query: 361 -DKLVEKEIILRPQ-------STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            + LV  E++   +        + D+    Y  +I HLC + +   A     +L+ KG  
Sbjct: 615 NELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYW 674

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            DP +F  +I G  K GN   A E+ + M
Sbjct: 675 FDPASFMPVIDGLGKRGNKHEADELAEKM 703



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 194/446 (43%), Gaps = 21/446 (4%)

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P++  Y  +++      R D    +  +M +  V P   T+  L+  LCD+G + + +++
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             +M E+   P + S F  L+   C++G  +   ++L  M RL        Y  LI +FC
Sbjct: 79  FDKMPEKGCEPNEYS-FGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 137

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K    D A KL+D++         +  L  +  ++N  I  LC +G+  +A   FR +  
Sbjct: 138 KEGKTDDAEKLVDEM--------RKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQI 189

Query: 409 KGVL-----DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
             VL     + + +N ++ G  KEG  + A  + + M       + ++Y   +   +R G
Sbjct: 190 DEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIG 249

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           +  +A+  L  M++ G  P    +  VM+ L ++G +  A  +M+ M   GV  +     
Sbjct: 250 KLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYT 309

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            +L      G V EA   +  MM+ G  PN    + LL  L ++G+   A +LL     +
Sbjct: 310 TLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEK 369

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             +ID  +   V+D L   GK   A  I+  +   G        +  I  ++   + K+ 
Sbjct: 370 GYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKC 429

Query: 641 --DIL--SRMIRGEMSRGSQKEKKQK 662
             D++  S +I G    G   E K+K
Sbjct: 430 MPDLISYSTIISGLCKAGRVGEAKKK 455



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 144/359 (40%), Gaps = 52/359 (14%)

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P    ++  LL    K G ++  + + K M+   +  E   + +LI   C +   D A +
Sbjct: 18  PPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE 77

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFN 418
           L DK+ EK            E + Y                                +F 
Sbjct: 78  LFDKMPEK----------GCEPNEY--------------------------------SFG 95

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L+RG+ + G      E++  M R G   +   Y  LI S+ ++G+  DA+  +D M +D
Sbjct: 96  ILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKD 155

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV----KENLDLVAKILEALLMRGH 534
           G SP    F + + +L   G+V  ASR+ + M    V    + N+     +L      G 
Sbjct: 156 GLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGM 215

Query: 535 VEEALGRIDLMMQSGSVPNFDSL---LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +EEA    + M  S ++ N +S    L  L   GK + A  +L   +      ++ SY  
Sbjct: 216 LEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNI 275

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           V+D L   G   +A  +L ++M   GV  D  +   L+ G    G   +A ++L  M+R
Sbjct: 276 VMDGLCKNGVLFDA-RMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMR 333


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 270/573 (47%), Gaps = 17/573 (2%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  KG+  +   F +LI     +G ++++  +   M++ G   ++ +Y+ L     ++G
Sbjct: 223 EMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKG 282

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           RY  A    + M+ +GIE    TYNV +     + +   A    + M+   IS + VTYN
Sbjct: 283 RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 342

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+ING+ +  K+  A ++F EM + ++ P  ++Y  +I G+  V   ++ALR+ D M++ 
Sbjct: 343 TLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAA 402

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            ++ N VTY  LL GLC   K  E+ K L E +        +  +  L+   CK+G L+ 
Sbjct: 403 GLRLNEVTYGTLLNGLCKHEKF-ELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDE 461

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR-PQSTLDME 379
           A  ++  M +  +  +   Y  LI  FC+      A         KEII R  +S L + 
Sbjct: 462 AVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSA---------KEIICRMYRSGLVLN 512

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              Y+ +I + C +G   +A   +  +   G   D    N L+    ++G    A + + 
Sbjct: 513 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 572

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M R G+  ++  Y C+I  Y   G+P +A +  D MI+ G  P+   + S+++ L + G
Sbjct: 573 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 632

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
            +  A + +  +       +  +   +L      G++ EA+   D M+Q+  +P+   + 
Sbjct: 633 NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 692

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCII-DLASYEKVLDALLAAGKTLNAYSILFKIME 614
           SLL+ L  KGK + AV L    +GR  +  +   Y  ++D L  AG    A+    ++M+
Sbjct: 693 SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 752

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           KG   D  + + +I   ++ G   +A D  S M
Sbjct: 753 KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 142/655 (21%), Positives = 273/655 (41%), Gaps = 57/655 (8%)

Query: 53   NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
            N D  T+  +I    RVG +  A+ I+  M + G+  ++ ++  LI ++ + G V E++K
Sbjct: 475  NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 534

Query: 113  IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
            ++ +M   G      + + L   + R G+   A+++   M   G+ P   TY+ ++ G+ 
Sbjct: 535  VYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYG 594

Query: 173  LSLKLETAIRFFEDMKSRGI-----------------------------------SLDVV 197
                   A  FF+DM   G                                    ++D V
Sbjct: 595  SIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSV 654

Query: 198  TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF-DE 256
             YNT++    +   + EA  LF +M + N+ P   +Y++++ G     +A  A+ +F   
Sbjct: 655  MYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTA 714

Query: 257  MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
            M    + PN V YT L+ GL  AG          EM+++   P D   F  ++    + G
Sbjct: 715  MGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCP-DTVAFNAIIDSCSRRG 773

Query: 317  HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
             +  A D    M    +      Y IL+  F K +   R + L   ++ + I   P    
Sbjct: 774  QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF--P---- 827

Query: 377  DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
              +  +++ +I  L  +G          +++ +G L D   FN LI  +S+ G    AF+
Sbjct: 828  --DKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFD 885

Query: 436  IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
            +V  M   GV  D D Y  +     +K    ++   L  M+E+G  P  + + +++  + 
Sbjct: 886  LVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMC 945

Query: 496  EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP--- 552
              G +Q A ++   M   G   +    + ++  LL  G  E+A+  +D M++   +P   
Sbjct: 946  RVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIA 1005

Query: 553  NFDSLLSVLSEKGKTIAAVKL---LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
             F +L+       K   A+KL   ++ C  +   +D+ +Y  ++  + A G +  A+ + 
Sbjct: 1006 TFTTLMHRFCRDAKIAEALKLKGVMELCGLK---LDVVAYNVLIMGMCANGDSAAAFELY 1062

Query: 610  FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI--RGEMSRGSQKEKKQK 662
             ++  +    +  +   L+  ++   N  Q + L   +  RG +S G   +   K
Sbjct: 1063 EEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGSTQHLDK 1117



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 154/379 (40%), Gaps = 41/379 (10%)

Query: 48   RAGLF-NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI 106
            R  LF NH   T L  ++ L + G    A     +M KKG   D   F  +I+S  ++G 
Sbjct: 717  RGTLFPNHVMYTCL--VDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQ 774

Query: 107  VQESVKIFDIMKQLGVERSVKSYD----------------ALFKLILRRGRYM------- 143
            + ++   F  M+  GV  ++ +Y+                +L+  ++R G +        
Sbjct: 775  MMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHS 834

Query: 144  ------------MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
                        +  +   KM+ EG    + T+N+++  +  S K+  A      M + G
Sbjct: 835  LILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLG 894

Query: 192  ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
            +  D  TYN + NG N+     E+  +  EM E  + P    Y T+I G   V     A 
Sbjct: 895  VFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAF 954

Query: 252  RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            ++ DEM++     + V  +A++ GL   GK  +   VL  M+   + P   + F  L+  
Sbjct: 955  KLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTI-ATFTTLMHR 1013

Query: 312  QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII-- 369
             C+   +  A  +   M    +  +   Y +LI   C       A +L +++  +++   
Sbjct: 1014 FCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1073

Query: 370  LRPQSTLDMEASSYNPMIQ 388
            +   + L    S+ N +IQ
Sbjct: 1074 ITTYAVLVDAISAANNLIQ 1092



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 128/278 (46%), Gaps = 5/278 (1%)

Query: 26   VYNVL-HGAKNSEHALQF---FRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
             YN+L HG    +  L++   +  + R G+F  D+ T   +I  L + G  +    +L  
Sbjct: 796  TYNILLHGFSKKQALLRYLSLYSTMMREGIFP-DKLTFHSLILGLSKSGIPDLGVKLLGK 854

Query: 82   MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
            M  +G   D+  F +LI  Y + G ++++  + + M  LGV     +Y+ +F  + ++  
Sbjct: 855  MIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSA 914

Query: 142  YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            +  +    ++ML  G+ P    Y  ++ G      ++ A +  ++M++ G     V  + 
Sbjct: 915  FRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESA 974

Query: 202  MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            M+ G     K ++A  +   M    + PT+ ++TT++  +    +  +AL++   M+   
Sbjct: 975  MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1034

Query: 262  VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
            +K + V Y  L+ G+C  G      ++  EM  R + P
Sbjct: 1035 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCP 1072



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 36/247 (14%)

Query: 16   ALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
             L  QF  N++ N    +     A     ++   G+F  DR+T+  +   L +      +
Sbjct: 860  TLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP-DRDTYNHIFNGLNKKSAFRES 918

Query: 76   RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
              +L +M + GV      +  LI    + G +Q + K+ D M+ LG      +  A+ + 
Sbjct: 919  TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 978

Query: 136  ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
            +L  G+   A    + ML   + PT  T+  ++  F    K+  A++    M+  G+ LD
Sbjct: 979  LLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLD 1038

Query: 196  VVTYNTMING-------------YNRFKKMD----------------------EAEKLFA 220
            VV YN +I G             Y   +  D                      + EKL  
Sbjct: 1039 VVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLT 1098

Query: 221  EMKEKNI 227
            +++E+ +
Sbjct: 1099 DLQERGL 1105


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 265/569 (46%), Gaps = 32/569 (5%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F+ LI SY        +          G   SV +Y+A+  L L       A+R+ + ML
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVL-LALSDASLPSARRFLSSML 144

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+ P  +TYN+++       +LE A+    DM+  G + + VTYNT++  + R  ++D
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 214 EAEKLFAEMKEK-NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            AE++ + M+E+ N +P ++++ +M+ G     R + A ++FDEM    + P+ V+Y  L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           L G C  G + E   V  EM +R + P D   F  L+   CK+G+L  A  ++  M    
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVP-DVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      +  LI+ FCK    D A+  ++++  ++  ++P          YN +I   C 
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEM--RKCGIQPSVV------CYNALINGYCK 375

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+   A    R++  K V  D V ++ +I G+ K GN DSAF++ + M ++GV  DA  
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI     +    DA    ++M++ G  P    + ++++   ++G V+ A  +   M+
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
            KGV  ++   + ++  L      +EA   +  +     VP+   +D+L+   S K +  
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS-KAEFK 554

Query: 569 AAVKLL-DFC---------------LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
           + V LL  FC               L R+  +D + Y  ++      G    A S   ++
Sbjct: 555 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 614

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           +  G   +  S+  L+ GL +EG   +AD
Sbjct: 615 LRSGFSPNSTSTISLVRGLFEEGMVVEAD 643



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/557 (25%), Positives = 264/557 (47%), Gaps = 38/557 (6%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
             L  AR  L  M + GV  +   + +L+ +   +G ++E+V +   M+  G   +  +Y
Sbjct: 131 ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTY 190

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           + L     R G    A+R  + M  EG  +P   T+N M+ G   + ++E A + F++M 
Sbjct: 191 NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 250

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             G++ DVV+YNT+++GY +   + E+  +F+EM ++ + P V+++T++I         +
Sbjct: 251 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLE 310

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A+ +  +M+   ++ N VT+TAL+ G C  G + +    + EM +  I P     +  L
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS-VVCYNAL 369

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   CK G ++ A ++++ M    +  +   Y  +I  +CK    D A +L  K+++K +
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
           +         +A +Y+ +I+ LC   +   A   F  +++ GV  D   +  LI GH KE
Sbjct: 430 L--------PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKE 481

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP----- 482
           GN + A  +   M R+GV  D   Y  LI    +     +A   L  +  +   P     
Sbjct: 482 GNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY 541

Query: 483 -------ASSLFRSV---MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
                  + + F+SV   ++     G ++ A +V +SM+++  K +  + + ++      
Sbjct: 542 DALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRG 601

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSV---LSEKGKTIAA----VKLLDFCLGRD---- 581
           G+V +AL     M++SG  PN  S +S+   L E+G  + A      LL  C   D    
Sbjct: 602 GNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEAS 661

Query: 582 -CIIDLASYEKVLDALL 597
             +IDL   E  +DAL+
Sbjct: 662 KALIDLNRKEGNVDALI 678



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 220/468 (47%), Gaps = 13/468 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   M+  L + G++  AR +  +M ++G+  D   +  L+  Y K G + ES+ +F  M
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            Q G+   V ++ +L     + G    A     +M   G+     T+  ++ GF     L
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+   E+M+  GI   VV YN +INGY +  +MD A +L  EM+ K ++P V++Y+T+
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY  V   D A ++  +M    V P+A+TY++L+ GLC+  ++ +  ++   M++  +
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  L+   CK G++  A  +   MIR  +  +   Y +LI    K+     A 
Sbjct: 465 QP-DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 358 KLLDKLVEKEIILRPQS---------TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +LL KL  ++ +  P +             E  S   +++  C  G   +A+  ++ ++ 
Sbjct: 524 RLLFKLYHEDPV--PDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581

Query: 409 KG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +   LD   ++ LI GH + GN   A    K M R G   ++ + I L+     +G   +
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 641

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           A  A+  ++       +   +++++   ++G V     V+  M   G+
Sbjct: 642 ADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGL 689



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 208/447 (46%), Gaps = 31/447 (6%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           +L  F  + + GL   D  T   +I    + G L  A  ++  M ++G++ +E  F  LI
Sbjct: 277 SLAVFSEMTQRGLVP-DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + + KKG + +++   + M++ G++ SV  Y+AL     + GR  +A+    +M ++ ++
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TY+ ++ G+     L++A +  + M  +G+  D +TY+++I G    K++++A +L
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M +  ++P   +YTT+I G+      + AL + DEM    V P+ VTY+ L+ GL  
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 515

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           + +  E  ++L ++     P  DN  +  L+ + C      +   +LK            
Sbjct: 516 SARTKEAHRLLFKLYHED-PVPDNIKYDALM-LCCSKAEFKSVVALLKG----------- 562

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
                   FC   +   A K+   ++++           ++ S Y+ +I   C  G   K
Sbjct: 563 --------FCMKGLMKEADKVYQSMLDR--------NWKLDGSVYSILIHGHCRGGNVRK 606

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A  F +Q+++ G   +  +  +L+RG  +EG    A   ++ +       DA+A   LI+
Sbjct: 607 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 666

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPAS 484
              ++G        L  M  DG  P+S
Sbjct: 667 LNRKEGNVDALIDVLCGMARDGLLPSS 693



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 51/321 (15%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           ++G+++ AR ++ +M  K V+ D   +  +I  Y K G +  + ++   M + GV     
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y +L + +    R   A   F  ML  G++P   TY  ++ G      +E A+   ++M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494

Query: 188 KSRGISLDVVTYNTMINGYNR-------------------------------------FK 210
             +G+  DVVTY+ +ING ++                                     FK
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 554

Query: 211 K-------------MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
                         M EA+K++  M ++N +     Y+ +I G+        AL    +M
Sbjct: 555 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 614

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
                 PN+ +  +L+ GL + G +VE    +++++    P  D      L+ +  K G+
Sbjct: 615 LRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT-CCPLADAEASKALIDLNRKEGN 673

Query: 318 LNAAADVLKAMIRLSIPTEAG 338
           ++A  DVL  M R  +   +G
Sbjct: 674 VDALIDVLCGMARDGLLPSSG 694


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 258/573 (45%), Gaps = 19/573 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  ++  Y + G ++ + ++      + V  +  +Y  + + +  RGR   A    ++M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P    Y+V+L          +A+R  ED+ +RG +LDV   N ++N       +D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  L  ++     EP V+SY  ++KG    +R      + +EM      PN VT+  L+
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC  G    V +VL +MVE    P D  ++  ++   CK GHL  A ++L  M    +
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTP-DIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 328

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  L++  C AE ++   +LL ++ +K+  L        +  ++N ++   C N
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL--------DDVTFNILVDFFCQN 380

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G   +      Q++++G + D + +  +I G  KEG  D A  ++K M   G   +  +Y
Sbjct: 381 GLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +++         DA+  +  MI+ G       F +++  L + G V+ A  ++K M+ 
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G   +L   + +++ L   G  +EAL  +++M+  G  PN   + S+ S LS +G+   
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
            +++ D         D   Y  V+ +L   G+T  A   L  ++  G V +  +   LI 
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIR 620

Query: 630 GLNQEGNTKQADILSRMIRGEMSRGSQKEKKQK 662
           GL  EG  K+A     M+    S+G+ ++   K
Sbjct: 621 GLASEGFVKEAQ---EMLTELCSKGALRKHLMK 650



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/528 (24%), Positives = 247/528 (46%), Gaps = 10/528 (1%)

Query: 27  YNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG 86
           YN +         L+  R +  A     +  T+  ++  L   G++  A  +L +MP++G
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 87  VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
                 M+ V++E+  + G  + +V++ + +   G    V + + +   I  +G    A 
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 212

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                + S G EP   +YN +L G  ++ +        E+M       ++VT+NT+I+  
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R    +   ++ A+M E    P +  Y T+I G       + A  I + M S+ +KPN 
Sbjct: 273 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNV 332

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           V Y  LL GLC A +  E +++L EM ++   P D+  F  L+   C++G ++   ++L+
Sbjct: 333 VCYNTLLKGLCSAERWEETEELLAEMFDKDC-PLDDVTFNILVDFFCQNGLVDRVIELLE 391

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+      +   Y  +I  FCK  + D A+ LL  +       +P +       SY  +
Sbjct: 392 QMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC--KPNTI------SYTIV 443

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           ++ LC   +   AE    Q++++G  L+P+ FN LI    K+G  + A E++K M   G 
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D  +Y  +I+   + G+  +A   L+ M+  G SP + ++ S+  +L  +GR+    +
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +  ++ +  ++ +  L   ++ +L  RG  E A+  +  M+ SG VPN
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 47/297 (15%)

Query: 44  RWVER----AGLFNHDRE----THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           RW E     A +F+ D      T   +++   + G ++    +L  M ++G   D   + 
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYT 406

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            +I  + K+G++ E+V +   M   G + +  SY  + K +    R++ A+   ++M+ +
Sbjct: 407 TVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 466

Query: 156 GIEPTRHTYNVMLWGFFLSLK--LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           G      T+N ++   FL  K  +E AI   + M   G S D+++Y+T+I+G  +  K D
Sbjct: 467 GCPLNPITFNTLI--NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK---------- 263
           EA +L   M  K + P  I Y+++        R +  +++FD ++   ++          
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 584

Query: 264 -------------------------PNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
                                    PN  TYT L+ GL   G + E Q++L E+  +
Sbjct: 585 SSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 641



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 85/418 (20%), Positives = 165/418 (39%), Gaps = 45/418 (10%)

Query: 266 AVTYTALLPGLCDAGK----------------------MV-------EVQKVLREMVERY 296
           +V  ++L+  LC AG+                      MV       +++   R      
Sbjct: 58  SVRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAVP 117

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +PP   + F  ++   C  G +  A  VL  M R         Y +++E  C+   +  A
Sbjct: 118 VPPNAYTYF-PVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSA 176

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           +++L+ L  +   L        +  + N ++  +C  G   +A    R L   G   D V
Sbjct: 177 VRVLEDLHARGCAL--------DVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVV 228

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           ++N +++G           E+++ M R   P +   +  LI    R G        L  M
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 288

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +E G +P   ++ ++++ + ++G ++ A  ++  M   G+K N+     +L+ L      
Sbjct: 289 VEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 348

Query: 536 EEALGRIDLMMQSGSVP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           EE    +  M      P     F+ L+    + G     ++LL+  L R C+ D+ +Y  
Sbjct: 349 EETEELLAEMFDK-DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTT 407

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL-NQEGNTKQADILSRMIR 648
           V++     G    A  +L  +   G   +  S   ++ GL + E      D++S+MI+
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 465



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 78/168 (46%), Gaps = 1/168 (0%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + N L      E A++  + +   G  + D  ++  +I+ LG+ GK + A  +L  M 
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTDEALELLNVMV 534

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            KG+  +  ++  +  +  ++G + + +++FD ++   +      Y+A+   + +RG   
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
            A  +   M+S G  P   TY +++ G      ++ A     ++ S+G
Sbjct: 595 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 242/514 (47%), Gaps = 46/514 (8%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A +  R V R+G+   +  T   M+  L + GK +  +  L +M   G+  D   +  
Sbjct: 100 ELAWEVHREVVRSGI-ELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNT 158

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK---------- 146
           LI +Y ++G+++E+ +I + M   G++ S+ +Y+A+   + ++GRY  AK          
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218

Query: 147 -------------------------RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
                                      F +ML +G+ P   +++ ++  F  +  L+ A+
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            +F DMK  G+  D V Y  +++GY R   M EA K+  EM E+     VI+Y T++ G 
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +   DA ++FDEM      P+  T+T L+ G C  G M +   +   M +R I P D
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKP-D 397

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK G +  A+++   MI   I      YGILI  +C       A +L D
Sbjct: 398 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 457

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            ++EK I    + TL     + N +I+  C +G + KA+ F  +++ KGV  D +++N L
Sbjct: 458 VMIEKGI----KPTL----VTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 509

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  +E N D AF  +  M + G+  D   Y  ++  + R+G   +A+  L  MIE G 
Sbjct: 510 INGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGI 569

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +P  S + +++        +  A R    M+++G
Sbjct: 570 NPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRG 603



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 137/555 (24%), Positives = 256/555 (46%), Gaps = 19/555 (3%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++LI +Y +   ++E  + F I++  G   S+ + ++L   +++     +A     ++
Sbjct: 50  VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  GIE   +T N+M+       K +    F  +M+  GI  D+VTYNT+I  Y R   +
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLL 169

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +EA ++   M +K ++P++ +Y  +I G     R   A  I  EM +  + P+  TY  L
Sbjct: 170 EEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           L   C      E +++  EM+ + + P D   F  L+ V  ++ HL+ A    + M +  
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVP-DLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   Y +L+  +C+      A+K+ D+++E+  +L        +  +YN ++  LC 
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL--------DVIAYNTILNGLCK 340

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                 A+  F +++++G L D   F  LI GH ++GN   A  +   M +R +  D  A
Sbjct: 341 EKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVA 400

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+ + + GE   A    D MI     P    +  ++ +    G V  A R+   M+
Sbjct: 401 YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMI 460

Query: 512 EKGVKENLDLVAKILEALLMRG---HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
           EKG+K  L     +++     G     +E LGR   M+  G  P+   +++L++    + 
Sbjct: 461 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR---MIAKGVAPDHISYNTLINGFVRED 517

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
               A   ++       + D+ +Y  V++     G+   A  +L K++EKG   D  +  
Sbjct: 518 NMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYT 577

Query: 626 KLIAGLNQEGNTKQA 640
            LI G   + N  +A
Sbjct: 578 ALINGHVTQDNLNEA 592



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/456 (22%), Positives = 208/456 (45%), Gaps = 14/456 (3%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + ++ +I  Y + +K+ E  + F  ++ K    ++ +  +++ G V ++  + A  +  E
Sbjct: 49  LVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHRE 108

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           +    ++ N  T   ++  LC  GK  +V+  L EM    I   D   +  L+G  C+ G
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYA-DMVTYNTLIGAYCREG 167

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L  A +++ +M    +      Y  +I   CK   Y RA  +L +++   I L P +T 
Sbjct: 168 LLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML--NIGLSPDTT- 224

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
                +YN ++   C      +A+  F +++++GV+ D V+F++LI   S+  + D A  
Sbjct: 225 -----TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALV 279

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
             + M + G+  D   Y  L+  Y R G   +A    D M+E G       + +++  L 
Sbjct: 280 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLC 339

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           ++  +  A ++   MVE+G   +      ++      G++ +AL     M Q    P+  
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 399

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            +++L+    + G+   A +L D  + R    +  +Y  +++A  + G    A+ +   +
Sbjct: 400 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 459

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           +EKG      + + +I G  + G++ +AD  L RMI
Sbjct: 460 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 495



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 110/206 (53%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   +VG++  A  +   M  + +  +   + +LI +Y   G V E+ +++D+M + G
Sbjct: 404 LIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 463

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ ++ + + + K   R G    A  +  +M+++G+ P   +YN ++ GF     ++ A 
Sbjct: 464 IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAF 523

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            +   M+  G+  D++TYN ++NG+ R  +M EAE +  +M EK I P   +YT +I G+
Sbjct: 524 LWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGH 583

Query: 242 VAVERADDALRIFDEMKSFDVKPNAV 267
           V  +  ++A R  DEM      P+ V
Sbjct: 584 VTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 3/280 (1%)

Query: 23  HNLVYNVLHGAKNSEHALQFF-RWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           +N + N L   K    A + F   VER  L   D  T   +I    + G +  A  +   
Sbjct: 331 YNTILNGLCKEKMLTDADKLFDEMVERGAL--PDFYTFTTLIHGHCQDGNMTKALSLFGT 388

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M ++ ++ D   +  LI+ + K G ++++ +++D M    +  +  +Y  L       G 
Sbjct: 389 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 448

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A R ++ M+ +GI+PT  T N ++ G+  S     A  F   M ++G++ D ++YNT
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +ING+ R   MD+A     +M+++ + P +I+Y  ++ G+    R  +A  +  +M    
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           + P+  TYTAL+ G      + E  +   EM++R   P D
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 168/594 (28%), Positives = 274/594 (46%), Gaps = 39/594 (6%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           AGLF  +   +  +I  L + G L  A   L  MP+     +   + ++I+ Y K   ++
Sbjct: 4   AGLF-PNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAP-NVVSYNIIIDGYCKARNIE 61

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           +++     M++LG   +  +Y ++ +   + G    A   F +M ++G EP    +NV+L
Sbjct: 62  KALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLL 121

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G + + K+  A   F  M SRG   DVVTYNTMI G  ++KK+DEA  L   MK++++ 
Sbjct: 122 SGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVS 181

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           PT ++YTT+I       R   A  +F++M           Y+ L   L  AGK+VE  +V
Sbjct: 182 PTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRV 241

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             +M  + +   DN+  + +LG+    G    AA ++  M+   I  +   Y ILI   C
Sbjct: 242 YSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLC 301

Query: 349 KA-----------EMYDRAIK--------LLDKLV---------EKEIILRPQSTLDMEA 380
           KA           EM  R I         LL+ L+         E    +  Q  L  + 
Sbjct: 302 KARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLP-DT 360

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            SYN MI+  C NG T +A   F+ ++K G VL+   +N +I G  K+    SA+ + K 
Sbjct: 361 CSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKR 420

Query: 440 M--GRRG-VPR-DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           M  G+   VP  +   Y  LI S  +  +  +A   L +M + G  P+  ++  ++  L 
Sbjct: 421 MQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLA 480

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
             GR+  A  + K M     ++ +     +L+ +L RG V+EA   +  M  +G VP+  
Sbjct: 481 RAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKF 540

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
            +D L+  L  +GK   A KL++  +      +     ++L AL A G    AY
Sbjct: 541 TYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAY 594



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 128/555 (23%), Positives = 224/555 (40%), Gaps = 47/555 (8%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL--KMIEILGRVGKLNHARCILL 80
           +N++ +    A+N E AL F R +E  G   H    H    +++   + G ++ A  +  
Sbjct: 47  YNIIIDGYCKARNIEKALAFLREMEELG---HPPTPHAYSSIVQSFCKTGNVSKAMDVFA 103

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +MP KG + D   F VL+    +   + E+ ++F  M   G +  V +Y+ +   + +  
Sbjct: 104 EMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWK 163

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A     +M  E + PT  TY  ++       +L+ A   FE M     +     Y+
Sbjct: 164 KLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYS 223

Query: 201 TMINGYNR--------------------------------FKKMD----EAEKLFAEMKE 224
            + N   R                                  KMD    EA KL  EM  
Sbjct: 224 VLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMG 283

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
           K I P   +Y+ +I G     R  +A  +F EM+   + P  VTY  LL GL    K+ +
Sbjct: 284 KKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQD 343

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             ++   M+++   P   S  + + G  C +G  N A  + + MI+  I      Y  +I
Sbjct: 344 AMELTYFMLDQGRLPDTCSYNLMIRGF-CANGDTNEAYCLFQDMIKDGIVLNTWTYNFMI 402

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             F K E +  A  L  ++   +    P   +     +Y  +I  LC   Q  +A     
Sbjct: 403 VGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNM----FTYEILISSLCKTDQVEEAFKLLS 458

Query: 405 QLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            +  KG +  +  +  L+   ++ G  D AFE+ K M R    +   +   L++  LR+G
Sbjct: 459 AMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRG 518

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              +AK  L  M + G  P    +  ++  L   G+   A ++++ +V  G +     + 
Sbjct: 519 SVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLR 578

Query: 524 KILEALLMRGHVEEA 538
           ++L AL  +G  + A
Sbjct: 579 QLLGALCAQGDFQGA 593



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 171/403 (42%), Gaps = 13/403 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +++++N L  A     A + +  + R  +   D    L ++ +    G    A  ++ +M
Sbjct: 222 YSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEM 281

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K +  D   + +LI    K     E+ ++F  M+  G+  +V +Y+ L + +L   + 
Sbjct: 282 MGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKL 341

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A      ML +G  P   +YN+M+ GF  +     A   F+DM   GI L+  TYN M
Sbjct: 342 QDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFM 401

Query: 203 INGYNRFKKMDEAEKLFAEMK----EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           I G+ + +    A  LF  M+    +K   P + +Y  +I      ++ ++A ++   M+
Sbjct: 402 IVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 461

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
                P+   +  LL  L  AG++ +  ++ +EM          S  + L G+  + G +
Sbjct: 462 DKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGIL-RRGSV 520

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A D LK M    I  +   Y  L+   C     D+A KL+++LV      RP      
Sbjct: 521 DEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG--KRP------ 572

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
           E      ++  LC  G    A  F+  L   GV   +  +N +
Sbjct: 573 ENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTL 615



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 9/212 (4%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +E+LI S  K   V+E+ K+   M+  G   S+K ++ L   + R GR   A   + +M 
Sbjct: 437 YEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMS 496

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
               +    + N++L G      ++ A  F + M   GI  D  TY+ ++ G     K D
Sbjct: 497 RINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKAD 556

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A KL  E+      P       ++    A      A   +  + S  V+     +  L+
Sbjct: 557 QARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLV 616

Query: 274 PGLCDAGK-----MVE----VQKVLREMVERY 296
              C A K     M+E    V  V+ E +E++
Sbjct: 617 TSCCLARKLDYLDMIEQREGVPDVIVERIEKF 648



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/224 (19%), Positives = 90/224 (40%), Gaps = 18/224 (8%)

Query: 3   ERAWTT------RLQNKIRALVPQ---FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFN 53
           + AW++      R+Q+     VP    F + ++ + L      E A +    +   G   
Sbjct: 408 DEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFV- 466

Query: 54  HDRETHLKMIEIL----GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQE 109
                 LK+ E+L     R G+L+ A  +  +M +   Q       +L++   ++G V E
Sbjct: 467 ----PSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDE 522

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
           +      M   G+     +YD L   +  +G+   A++   +++ +G  P       +L 
Sbjct: 523 AKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLG 582

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
                   + A  F+  + S G+ + +  +NT++      +K+D
Sbjct: 583 ALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLARKLD 626


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 148/614 (24%), Positives = 283/614 (46%), Gaps = 21/614 (3%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E +++ F+W      + H    +  +I+ LG          +LL M ++G+ + E +F +
Sbjct: 85  ETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFIL 144

Query: 97  LIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           +++ YG+ G+  ++ ++   MK +   E S +SY+ +  +++      +A   F  MLS+
Sbjct: 145 IMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSK 204

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G+ P  +T+ +++    +  +++ A     DM   G   + + Y T+I+  ++  ++DEA
Sbjct: 205 GVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEA 264

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            KL  EM      P V ++ T+I G+  + R  +  ++ D M      PN +TY  L+ G
Sbjct: 265 LKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHG 324

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLN-AAADVLKAMIRLSI 333
           LC   ++ E Q +L ++      P  N V F  L+    ++G LN A A V   MI    
Sbjct: 325 LCKTCRIDEAQALLSKV------PGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGY 378

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   +  L+   CK  ++  A++L++ +  K    +P        ++Y  +I   C  
Sbjct: 379 VPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGC--KPN------LNTYTILIDGFCKK 430

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           GQ  +A +  R+++ KG  L+ V +N LI    K G    A ++   M  +G   D   +
Sbjct: 431 GQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTF 490

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI    R  E  DA      M+ +G    S  F +++ +    G +Q A +++  M+ 
Sbjct: 491 NSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLF 550

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIA 569
           +G   +      +++AL   G VE+ LG  + M++ G  P+    + L++     GK   
Sbjct: 551 RGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHN 610

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A++ +   + R    D+ +Y  +++ L   G+   A ++  K+  +G   D  + + LI 
Sbjct: 611 ALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLIC 670

Query: 630 GLNQEGNTKQADIL 643
            L +EG    A  L
Sbjct: 671 WLCREGAFDDACFL 684



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 201/433 (46%), Gaps = 18/433 (4%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGL--FNHDRETHLKMIEILGRVGKLNHARCIL 79
           D N    V++G       L+  + V+R  L  F  +  T+  ++  L +  +++ A+ +L
Sbjct: 279 DVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL 338

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK-IFDIMKQLGVERSVKSYDALFKLILR 138
             +P   V      F  L+  + + G + E+   ++D M   G    V ++  L   + +
Sbjct: 339 SKVPGPNVVH----FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCK 394

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           +G +  A    N M ++G +P  +TY +++ GF    +LE A     +M ++G SL+ V 
Sbjct: 395 KGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVG 454

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN +I+   +  K+ EA  +F EM  K  +P + ++ ++I G   V+  +DAL ++ +M 
Sbjct: 455 YNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV 514

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
              V  N+VT+  L+      G++ E  K++ +M+ R   P D   +  L+   CK+G +
Sbjct: 515 LEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGC-PLDEITYNGLIKALCKTGAV 573

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
                + + MIR  +        ILI  FC A     A++ +  ++ +            
Sbjct: 574 EKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHR--------GFSP 625

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA-FEI 436
           +  +YN +I  LC  G+  +A   F +L  +G+  D + +N LI    +EG  D A F +
Sbjct: 626 DIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLL 685

Query: 437 VKIMGRRGVPRDA 449
            + +    VP D 
Sbjct: 686 YRGVENGFVPNDV 698



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 121/530 (22%), Positives = 225/530 (42%), Gaps = 73/530 (13%)

Query: 19  PQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           P F  +N+V +VL        A   F  +   G+  +D    L M + L  V ++++A  
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVM-KALCMVNEVDNACL 231

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L DM K G   +  +++ LI++  K+  V E++K+ + M  +G    V +++ +     
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R  R +   +  ++M+ +G  P   TY  ++ G   + +++ A    + + S+    +VV
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEA----QALLSKVPGPNVV 347

Query: 198 TYNTMINGYNRFKKMDEAEK-LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
            +NT++NG+ R  +++EA   ++ +M      P V +++T++ G         AL + ++
Sbjct: 348 HFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVND 407

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKS 315
           M +   KPN  TYT L+ G C  G++ E   +LREM+ +      N+V +  L+   CK 
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGF--SLNTVGYNALISALCKH 465

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP--- 372
           G ++ A D+   M       +   +  LI   C+ +  + A+ L   +V + +I      
Sbjct: 466 GKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTF 525

Query: 373 -------------QSTL-----------DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
                        Q  L            ++  +YN +I+ LC  G   K    F ++++
Sbjct: 526 NTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIR 585

Query: 409 KGVL------------------------------------DPVAFNNLIRGHSKEGNPDS 432
           KG+                                     D V +N+LI G  K G    
Sbjct: 586 KGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQE 645

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           A  + + +   G+  D+  Y  LI    R+G   DA   L   +E+G  P
Sbjct: 646 ALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVP 695



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 1/205 (0%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL  +R +   G+   +  T   +I    R G++  A  ++ DM  +G   DE  +  
Sbjct: 504 EDALALYRDMVLEGVI-ANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNG 562

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI++  K G V++ + +F+ M + G+  S+ + + L       G+   A  +   M+  G
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P   TYN ++ G     +++ A+  FE +++ GI  D +TYNT+I    R    D+A 
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDAC 682

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGY 241
            L     E    P  +++  ++  +
Sbjct: 683 FLLYRGVENGFVPNDVTWNILVYNF 707


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 155/624 (24%), Positives = 276/624 (44%), Gaps = 54/624 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+   +VG +   + +L +M K+  + +   +   I    + G V E++++ 
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVK 299

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            +M + G+     +Y  L     ++ R   AK  F  M S G+ P R TY  ++ GF   
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A+R  ++M +RG+ L+VVTYN MI G  +  +M +A  LF EM    IEP   +Y
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTY 419

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I GY+       A  +  EMK+  + P+  TY+ L+ GLC +  + +  +VL +M+ 
Sbjct: 420 NLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR 479

Query: 295 RYIPPKDNSVFM--KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
             + P   +VFM   L+    +      A ++LK MI   +  +   Y  LI   C+A+ 
Sbjct: 480 NGVKP---NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            + A  LL  + EK I  +P       A +Y   I     +G+   AE +F+ ++  G++
Sbjct: 537 VEEAKMLLVDMGEKGI--KPN------AHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            + V +  LI+GH   GN   A    K M  +G+  D  AY  +I S  + G+  +A   
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE--AL 529
               ++ G  P   L+ S++    ++G ++ AS++   M+  G+  N+ +   ++     
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGY 708

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN------------------------------------ 553
              G++ EA    D M+  G  P+                                    
Sbjct: 709 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS 768

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F+SL+    + GK I A +L D  + +    ++ +Y  ++DA   A     A  +   +
Sbjct: 769 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 828

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGN 636
             +  + +  +   L+   NQ GN
Sbjct: 829 ETRNIIPNTLTYTSLLLSYNQIGN 852



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 176/677 (25%), Positives = 300/677 (44%), Gaps = 51/677 (7%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N     L      + AL+  + +   GL   D  T+  +++   +  +   A+ I  
Sbjct: 277 FTYNAFIGGLCQTGAVDEALEVKKLMMEKGL-GPDGHTYTLLVDGFCKQKRSKEAKLIFE 335

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            MP  G+  +   +  LI+ + K+G ++E+++I D M   G++ +V +Y+A+   I + G
Sbjct: 336 SMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A   FN+ML  GIEP   TYN+++ G+  S  +  A     +MK+R ++    TY+
Sbjct: 396 EMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYS 455

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G      + +A ++  +M    ++P V  Y T+IK YV   R + A+ +   M + 
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN 515

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+   Y  L+ GLC A K+ E + +L +M E+ I P  ++ +   + +  KSG +  
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT-YGAFINLYSKSGEIQV 574

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A    K M+   I      Y ILI+  C       A+     ++EK +I  P    D+ A
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI--P----DIRA 628

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
             Y+ +I  L  NG+T +A   F + +K GV+ D   +N+LI G  KEG+ + A ++   
Sbjct: 629 --YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 440 MGRRGVPRDADAYICLIE--SYLRKGEPADAKTALDSMIEDGHSP--------------- 482
           M   G+  +   Y  LI    Y + G   +A    D MI  G SP               
Sbjct: 687 MLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 746

Query: 483 -------------------ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
                              + S F S+++S  + G+V  A  +   MV+K +  N+    
Sbjct: 747 GNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYT 806

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            +++A      +EEA      M     +PN   + SLL   ++ G     + L      R
Sbjct: 807 ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 866

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
               D  +Y  +  A    GK+L A  +L K + +G   +    D LI  L +E      
Sbjct: 867 GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 926

Query: 641 -DILSRMIRGEMSRGSQ 656
            ++LS M + E+S  S+
Sbjct: 927 LELLSEMGKEELSLSSK 943



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 136/561 (24%), Positives = 250/561 (44%), Gaps = 61/561 (10%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++ I+ +   G + E+  +F      G   ++   + L + +L+     +  + +  M
Sbjct: 174 VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSM 233

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIR---FFEDMKSRGISLDVVTYNTMINGYNRF 209
           +   I P  +TY  ++       K+   I+      +M+ +    ++ TYN  I G  + 
Sbjct: 234 VEAKIVPDVYTYTNVIKA---HCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQT 289

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
             +DEA ++   M EK + P   +YT ++ G+   +R+ +A  IF+ M S  + PN  TY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAM 328
           TAL+ G    G + E  ++  EM+ R +  K N V +  ++G   K+G +  A  +   M
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGL--KLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +   I  +   Y +LI+ + K+    +A +LL ++  +++   P         +Y+ +I 
Sbjct: 408 LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP--------FTYSVLIS 459

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LCH+    KA     Q+++ GV   V  +  LI+ + +E   + A E++KIM   GV  
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y CLI    R  +  +AK  L  M E G  P +  + + +    + G +Q A R  
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVE-----EALGRIDLMMQSGSVPNFDSLLSVLS 562
           K M+  G+  N      ++  +L++GH +     EAL     M++ G +P          
Sbjct: 580 KDMLSSGIVPN-----NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP---------- 624

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
                                 D+ +Y  ++ +L   GKT  A  +  K ++ G V D  
Sbjct: 625 ----------------------DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662

Query: 623 SSDKLIAGLNQEGNTKQADIL 643
             + LI+G  +EG+ ++A  L
Sbjct: 663 LYNSLISGFCKEGDIEKASQL 683



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/535 (24%), Positives = 246/535 (45%), Gaps = 16/535 (2%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K++  M +  +   V +Y  + K   + G  +  K   ++M  E  +P   TYN  + G 
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGL 286

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             +  ++ A+   + M  +G+  D  TY  +++G+ + K+  EA+ +F  M    + P  
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +YT +I G++     ++ALRI DEM +  +K N VTY A++ G+  AG+M +   +  E
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M+   I P D   +  L+    KS  +  A ++L  M    +      Y +LI   C + 
Sbjct: 407 MLMAGIEP-DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSS 465

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
              +A ++LD+++   +  +P   +      Y  +I+      +   A    + ++  GV
Sbjct: 466 DLQKANEVLDQMIRNGV--KPNVFM------YGTLIKAYVQESRYEMAIELLKIMIANGV 517

Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
           L D   +N LI G  +    + A  ++  MG +G+  +A  Y   I  Y + GE   A+ 
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
               M+  G  P + ++  +++   + G    A    K M+EKG+  ++   + I+ +L 
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G  +EA+G     +++G VP+   ++SL+S   ++G    A +L D  L      ++ 
Sbjct: 638 KNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697

Query: 588 SYEKVLD--ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            Y  +++      +G    A+ +  +++ KG   D      LI G  +EGN ++A
Sbjct: 698 VYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 752



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 228/488 (46%), Gaps = 21/488 (4%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   GV  D   +  LI    +   V+E+  +   M + G++ +  +Y A   L  + G 
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             +A+RYF  MLS GI P    Y +++ G         A+  F+ M  +G+  D+  Y+ 
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+  ++  K  EA  +F +  +  + P V  Y ++I G+      + A +++DEM    
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 262 VKPNAVTYTALLP--GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
           + PN V Y  L+   G C +G + E  K+  EM+ + I P D  ++  L+    K G+L 
Sbjct: 692 INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISP-DGYIYCILIDGCGKEGNLE 750

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  +     + S+ + +  +  LI++FCK      A +L D +V+K+  L P       
Sbjct: 751 KALSLFHEAQQKSVGSLSA-FNSLIDSFCKHGKVIEARELFDDMVDKK--LTPNIV---- 803

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +Y  +I          +AE  F  +  + ++ + + + +L+  +++ GN      + K
Sbjct: 804 --TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 861

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  RG+  DA AY  +  +Y ++G+  +A   L+  + +G      +F +++  L ++ 
Sbjct: 862 DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEK 921

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLM----RGHVEEALGRIDLMMQSGSVPNF 554
           ++ T   V++ + E G KE L L +K    LL+     G+ +EA   + +M + G VP  
Sbjct: 922 QIST---VLELLSEMG-KEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 977

Query: 555 DSLLSVLS 562
            SL   +S
Sbjct: 978 LSLTDSIS 985



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 183/400 (45%), Gaps = 48/400 (12%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVL----HGAKNSEHALQFFRWVERAGLFNHDR 56
           +AER +   L + I   VP   +N++Y +L        N+  AL  F+ +   GL   D 
Sbjct: 574 VAERYFKDMLSSGI---VP---NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI-PDI 626

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
             +  +I  L + GK   A  + L   K GV  D  ++  LI  + K+G ++++ +++D 
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 117 MKQLGVERSVKSYDALFK--LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           M   G+  ++  Y+ L       + G    A + F++M+S+GI P  + Y +++ G    
Sbjct: 687 MLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 746

Query: 175 LKLETAI----------------------------------RFFEDMKSRGISLDVVTYN 200
             LE A+                                    F+DM  + ++ ++VTY 
Sbjct: 747 GNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYT 806

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+ Y + + M+EAE+LF +M+ +NI P  ++YT+++  Y  +      + +F +M++ 
Sbjct: 807 ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 866

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            +  +A+ Y  +    C  GK +E  K+L + +   I  +D+ VF  L+   CK   ++ 
Sbjct: 867 GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDD-VFDALIFHLCKEKQIST 925

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
             ++L  M +  +   +     L+  F K+   D A K+L
Sbjct: 926 VLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVL 965



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/302 (20%), Positives = 132/302 (43%), Gaps = 24/302 (7%)

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPP----------------KDNSVFMKLLGV 311
           +Y+ L   LC++G + +   +L ++++   PP                 + +VF   +  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
               G LN A+ V  A I             L+ +  KA M     K+   +VE +I+  
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIV-- 239

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           P      +  +Y  +I+  C  G   K ++   ++ K+   +   +N  I G  + G  D
Sbjct: 240 P------DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVD 293

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A E+ K+M  +G+  D   Y  L++ + ++    +AK   +SM   G +P    + +++
Sbjct: 294 EALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALI 353

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           +   ++G ++ A R+   M+ +G+K N+     ++  +   G + +A+   + M+ +G  
Sbjct: 354 DGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIE 413

Query: 552 PN 553
           P+
Sbjct: 414 PD 415



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 82/181 (45%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+  G+   +  A  + LDM  + +  +   +  L+ SY + G   + + +F  M
Sbjct: 804 TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 863

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +  G+     +Y  +     + G+ + A +  NK L EGI+     ++ +++      ++
Sbjct: 864 EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 923

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            T +    +M    +SL   T NT++ G+ +    DEA K+   M+     PT +S T  
Sbjct: 924 STVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDS 983

Query: 238 I 238
           I
Sbjct: 984 I 984



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 134/333 (40%), Gaps = 19/333 (5%)

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY------ 383
           ++S P     Y IL    C + +  +A  +L+KL++      P   LD     Y      
Sbjct: 113 KMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTR--KPPLEILDSLVRCYREFGGS 170

Query: 384 -----NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIV 437
                +  I      G   +A   F   + +G     +  NNL+R   K       +++ 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M    +  D   Y  +I+++ + G+    K  L  M E    P    + + +  L + 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQT 289

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G V  A  V K M+EKG+  +      +++    +   +EA    + M  SG  PN   +
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            +L+    ++G    A+++ D  + R   +++ +Y  ++  +  AG+   A S+  +++ 
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 615 KGGVTDWKSSDKLIAG-LNQEGNTKQADILSRM 646
            G   D  + + LI G L      K  ++L+ M
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/552 (25%), Positives = 263/552 (47%), Gaps = 13/552 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++LI +Y +   ++E  + F ++++ G   S+ + +AL   I++ G   +A + +   
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G     +T N+M+       KL+    +  +M+ +G+  D+VTYNT++N Y R   +
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            EA  L   M  K ++P + +Y  +I G       + A R+ DEM    + PNA T+  +
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           L   C    + E ++V  EM++R + P D   F  ++GV  ++G L  A    + M  + 
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVP-DLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   Y ILI  +C+ +    A+K+ +++VE+  +        M+  +YN ++  LC 
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCV--------MDVVTYNTLLNGLCR 446

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                 A+  F++++++GV  D      LI G+ K+GN   A  + + M  R +  D   
Sbjct: 447 GKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVT 506

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  L++ + + GE   AK     MI     P+   F  ++      G V  A R+   M 
Sbjct: 507 YNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMK 566

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           EKG+K  L     I++  L  G++ +A   ++ M+  G  P+   +++L++   ++    
Sbjct: 567 EKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFD 626

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A  L++    R  + +L +Y  +L      G+   A  +L K+++KG   D  +   LI
Sbjct: 627 RAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLI 686

Query: 629 AGLNQEGNTKQA 640
            G   + N K+A
Sbjct: 687 NGYVSKDNMKEA 698



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 221/489 (45%), Gaps = 45/489 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+  L + GKL++    L +M +KGV  D   +  L+ +Y ++G+V E+  + D M   G
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRY--------------------------------- 148
           ++  + +Y+AL   + + G Y  AKR                                  
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAE 349

Query: 149 --FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
             FN+ML  G+ P   +++ ++  F  + +L  A+ +FE MK  G+  D V Y  +INGY
Sbjct: 350 RVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY 409

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R   +  A K+  EM E+     V++Y T++ G    +  DDA  +F EM    V P+ 
Sbjct: 410 CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDF 469

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            T T L+ G C  G M +   +   M  R + P D   +  L+   CK G +  A ++  
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKP-DVVTYNTLMDGFCKVGEMEKAKELWY 528

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            MI   I      + ILI  FC   +   A +L D++ EK I    + TL     + N +
Sbjct: 529 DMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGI----KPTL----VTCNTI 580

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I+     G   KA  F   ++ +GV  D + +N LI    KE N D AF ++  M  RG+
Sbjct: 581 IKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGL 640

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             +   Y  ++  + R G   +A+  L  MI+ G +P  S + S++        ++ A R
Sbjct: 641 LPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFR 700

Query: 506 VMKSMVEKG 514
           V   M+++G
Sbjct: 701 VHDEMLQRG 709



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 209/437 (47%), Gaps = 49/437 (11%)

Query: 48  RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV 107
           + GLF ++      +I  L + G    A+ +L +M   G+  +   F  ++    +K  V
Sbjct: 291 KPGLFTYN-----ALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDV 345

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
            E+ ++F+ M Q GV   + S+ ++  +  R G    A  YF KM   G+ P    Y ++
Sbjct: 346 WEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTIL 405

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           + G+  +  +  A++   +M  RG  +DVVTYNT++NG  R K +D+A++LF EM E+ +
Sbjct: 406 INGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P   + TT+I GY        AL +F+ M    +KP+ VTY  L+ G C  G+M + ++
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525

Query: 288 VLREMVERYIPPKDNSVFMKLLG--------------------------VQC-------- 313
           +  +M+ R I P   S  + + G                          V C        
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           ++G+L+ A D L  MI   +P +   Y  LI +F K E +DRA  L++ + E+ ++  P 
Sbjct: 586 RAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLL--PN 643

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDS 432
                   +YN ++     +G+  +AE+   +++ KG+  D   + +LI G+  + N   
Sbjct: 644 LV------TYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKE 697

Query: 433 AFEIVKIMGRRG-VPRD 448
           AF +   M +RG VP D
Sbjct: 698 AFRVHDEMLQRGFVPDD 714



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/522 (23%), Positives = 233/522 (44%), Gaps = 45/522 (8%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           +VG ++ A  +  D  K G   +     +++ +  K G +         M++ GV   + 
Sbjct: 201 KVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLV 260

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L     RRG    A    + M  +G++P   TYN ++ G       E A R  ++M
Sbjct: 261 TYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM 320

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
              G+  +  T+N M+    R + + EAE++F EM ++ + P +IS+++++  +      
Sbjct: 321 LGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGEL 380

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDA---------------------------- 279
             AL  F++MK   + P+ V YT L+ G C                              
Sbjct: 381 GRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTL 440

Query: 280 ------GKMV-EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
                 GKM+ +  ++ +EMVER + P D      L+   CK G++  A  + + M   S
Sbjct: 441 LNGLCRGKMLDDADELFKEMVERGVFP-DFYTLTTLIHGYCKDGNMTKALSLFETMTLRS 499

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   Y  L++ FCK    ++A +L   ++ +EI   P         S++ +I   C 
Sbjct: 500 LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIF--PSYI------SFSILINGFCS 551

Query: 393 NGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G   +A   + ++ +KG+    V  N +I+G+ + GN   A + +  M   GVP D   
Sbjct: 552 LGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCIT 611

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI S++++     A   +++M E G  P    + +++      GR+Q A  V+  M+
Sbjct: 612 YNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMI 671

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +KG+  +      ++   + + +++EA    D M+Q G VP+
Sbjct: 672 DKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 1/279 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L   K  + A + F+ +   G+F  D  T   +I    + G +  A  +   M
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEMVERGVF-PDFYTLTTLIHGYCKDGNMTKALSLFETM 495

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + ++ D   +  L++ + K G ++++ +++  M    +  S  S+  L       G  
Sbjct: 496 TLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLV 555

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R +++M  +GI+PT  T N ++ G+  +  L  A  F   M S G+  D +TYNT+
Sbjct: 556 SEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTL 615

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           IN + + +  D A  L   M+E+ + P +++Y  ++ G+    R  +A  +  +M    +
Sbjct: 616 INSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGI 675

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
            P+  TYT+L+ G      M E  +V  EM++R   P D
Sbjct: 676 NPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 714


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 257/573 (44%), Gaps = 19/573 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  ++  Y + G ++ + ++      + V  +  +Y  + + +  RGR   A    ++M 
Sbjct: 130 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P    Y+V+L          +A+R  ED+ +RG +LDV   N ++N       +D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  L  ++     EP V+SY  ++KG    +R      + +EM      PN VT+  L+
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC  G    V +VL +MVE    P D  ++  ++   CK GHL  A ++L  M    +
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTP-DIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  L++  C AE ++   +LL ++ +K+  L        +  ++N ++   C N
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL--------DDVTFNILVDFFCQN 417

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G   +      Q+++ G + D + +  +I G  KEG  D A  ++K M   G   +  +Y
Sbjct: 418 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 477

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +++         DA+  +  MI+ G       F +++  L + G V+ A  ++K M+ 
Sbjct: 478 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 537

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G   +L   + +++ L   G  +EAL  +++M+  G  PN   + S+ S LS +G+   
Sbjct: 538 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 597

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
            +++ D         D   Y  V+ +L   G+T  A   L  ++  G V +  +   LI 
Sbjct: 598 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIR 657

Query: 630 GLNQEGNTKQADILSRMIRGEMSRGSQKEKKQK 662
           GL  EG  K+A     M+    S+G+ ++   K
Sbjct: 658 GLASEGFVKEAQ---EMLTELCSKGALRKHLMK 687



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/528 (24%), Positives = 247/528 (46%), Gaps = 10/528 (1%)

Query: 27  YNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG 86
           YN +         L+  R +  A     +  T+  ++  L   G++  A  +L +MP++G
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 189

Query: 87  VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
                 M+ V++E+  + G  + +V++ + +   G    V + + +   I  +G    A 
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 249

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                + S G EP   +YN +L G  ++ +        E+M       ++VT+NT+I+  
Sbjct: 250 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 309

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R    +   ++ A+M E    P +  Y T+I G       + A  I + M S+ +KPN 
Sbjct: 310 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNV 369

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           V Y  LL GLC A +  E +++L EM ++   P D+  F  L+   C++G ++   ++L+
Sbjct: 370 VCYNTLLKGLCSAERWEETEELLAEMFDKDC-PLDDVTFNILVDFFCQNGLVDRVIELLE 428

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+      +   Y  +I  FCK  + D A+ LL  +       +P +       SY  +
Sbjct: 429 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC--KPNTI------SYTIV 480

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           ++ LC   +   AE    Q++++G  L+P+ FN LI    K+G  + A E++K M   G 
Sbjct: 481 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 540

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D  +Y  +I+   + G+  +A   L+ M+  G SP + ++ S+  +L  +GR+    +
Sbjct: 541 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 600

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +  ++ +  ++ +  L   ++ +L  RG  E A+  +  M+ SG VPN
Sbjct: 601 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 648



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 128/297 (43%), Gaps = 47/297 (15%)

Query: 44  RWVER----AGLFNHDRE----THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           RW E     A +F+ D      T   +++   + G ++    +L  M + G   D   + 
Sbjct: 384 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYT 443

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            +I  + K+G++ E+V +   M   G + +  SY  + K +    R++ A+   ++M+ +
Sbjct: 444 TVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 503

Query: 156 GIEPTRHTYNVMLWGFFLSLK--LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           G      T+N ++   FL  K  +E AI   + M   G S D+++Y+T+I+G  +  K D
Sbjct: 504 GCPLNPITFNTLI--NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 561

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK---------- 263
           EA +L   M  K + P  I Y+++        R +  +++FD ++   ++          
Sbjct: 562 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 621

Query: 264 -------------------------PNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
                                    PN  TYT L+ GL   G + E Q++L E+  +
Sbjct: 622 SSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 678



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/382 (19%), Positives = 155/382 (40%), Gaps = 19/382 (4%)

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
           +V  ++L+  LC AG+  E  + L               +  ++   C++G L +A  + 
Sbjct: 95  SVRLSSLIRSLCAAGRTAEAARALSAAGGG----AGVVAYNAMVAGYCRAGQLESARRLA 150

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
            A   + +P  A  Y  ++   C       A+ +LD++  +     P          Y+ 
Sbjct: 151 AA---VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIP--------PMYHV 199

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +++  C  G    A      L  +G  LD    N ++     +G+ D A  +++ +   G
Sbjct: 200 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 259

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
              D  +Y  +++           +  ++ M+     P    F +++  L  +G  +   
Sbjct: 260 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 319

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
            V+  MVE G   ++ + A I++ +   GH+E A   ++ M   G  PN   +++LL  L
Sbjct: 320 EVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGL 379

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
               +     +LL     +DC +D  ++  ++D     G       +L +++E G + D 
Sbjct: 380 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDV 439

Query: 622 KSSDKLIAGLNQEGNTKQADIL 643
            +   +I G  +EG   +A +L
Sbjct: 440 ITYTTVINGFCKEGLIDEAVML 461



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 78/168 (46%), Gaps = 1/168 (0%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + N L      E A++  + +   G  + D  ++  +I+ LG+ GK + A  +L  M 
Sbjct: 513 NTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTDEALELLNVMV 571

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            KG+  +  ++  +  +  ++G + + +++FD ++   +      Y+A+   + +RG   
Sbjct: 572 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 631

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
            A  +   M+S G  P   TY +++ G      ++ A     ++ S+G
Sbjct: 632 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 150/578 (25%), Positives = 272/578 (47%), Gaps = 27/578 (4%)

Query: 81   DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            +M  KG+  +   F +LI     +G ++++  +   M++ G   ++ +Y+ L     ++G
Sbjct: 974  EMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKG 1033

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
            RY  A    + M+ +GIE    TYNV +     + +   A    + M+   IS + VTYN
Sbjct: 1034 RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 1093

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            T+ING+ +  K+  A ++F EM + ++ P  ++Y  +I G+  V   ++ALR+ D M++ 
Sbjct: 1094 TLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAA 1153

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVL-----REMVERYIPPKDNSVFMKLLGVQCKS 315
             ++ N VTY  LL GLC   K    +++L      +MV  +I       +  L+   CK+
Sbjct: 1154 GLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI------AYTVLIDGLCKN 1207

Query: 316  GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR-PQS 374
            G L+ A  ++  M +  +  +   Y  LI  FC+      A         KEII R  +S
Sbjct: 1208 GMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSA---------KEIICRMYRS 1258

Query: 375  TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
             L +    Y+ +I + C +G   +A   +  +   G   D    N L+    ++G    A
Sbjct: 1259 GLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 1318

Query: 434  FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             + +  M R G+  ++  Y C+I  Y   G+P +A +  D MI+ G  P+   + S+++ 
Sbjct: 1319 EKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKG 1378

Query: 494  LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            L + G +  A + +  +       +  +   +L      G++ EA+   D M+Q+  +P+
Sbjct: 1379 LCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPD 1438

Query: 554  ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII-DLASYEKVLDALLAAGKTLNAYSIL 609
               + SLL+ L  KGK + AV L    +GR  +  +   Y  ++D L  AG    A+   
Sbjct: 1439 SYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFF 1498

Query: 610  FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
             ++M+KG   D  + + +I   ++ G   +A D  S M
Sbjct: 1499 EEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 142/655 (21%), Positives = 273/655 (41%), Gaps = 57/655 (8%)

Query: 53   NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
            N D  T+  +I    RVG +  A+ I+  M + G+  ++ ++  LI ++ + G V E++K
Sbjct: 1226 NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 1285

Query: 113  IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
            ++ +M   G      + + L   + R G+   A+++   M   G+ P   TY+ ++ G+ 
Sbjct: 1286 VYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYG 1345

Query: 173  LSLKLETAIRFFEDMKSRGI-----------------------------------SLDVV 197
                   A  FF+DM   G                                    ++D V
Sbjct: 1346 SIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSV 1405

Query: 198  TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF-DE 256
             YNT++    +   + EA  LF +M + N+ P   +Y++++ G     +A  A+ +F   
Sbjct: 1406 MYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTA 1465

Query: 257  MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
            M    + PN V YT L+ GL  AG          EM+++   P D   F  ++    + G
Sbjct: 1466 MGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCP-DTVAFNAIIDSCSRRG 1524

Query: 317  HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
             +  A D    M    +      Y IL+  F K +   R + L   ++ + I   P    
Sbjct: 1525 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF--P---- 1578

Query: 377  DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
              +  +++ +I  L  +G          +++ +G L D   FN LI  +S+ G    AF+
Sbjct: 1579 --DKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFD 1636

Query: 436  IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
            +V  M   GV  D D Y  +     +K    ++   L  M+E+G  P  + + +++  + 
Sbjct: 1637 LVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMC 1696

Query: 496  EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP--- 552
              G +Q A ++   M   G   +    + ++  LL  G  E+A+  +D M++   +P   
Sbjct: 1697 RVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIA 1756

Query: 553  NFDSLLSVLSEKGKTIAAVKL---LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
             F +L+       K   A+KL   ++ C  +   +D+ +Y  ++  + A G +  A+ + 
Sbjct: 1757 TFTTLMHRFCRDAKIAEALKLKGVMELCGLK---LDVVAYNVLIMGMCANGDSAAAFELY 1813

Query: 610  FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI--RGEMSRGSQKEKKQK 662
             ++  +    +  +   L+  ++   N  Q + L   +  RG +S G   +   K
Sbjct: 1814 EEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGSTQHLDK 1868



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 154/379 (40%), Gaps = 41/379 (10%)

Query: 48   RAGLF-NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI 106
            R  LF NH   T L  ++ L + G    A     +M KKG   D   F  +I+S  ++G 
Sbjct: 1468 RGTLFPNHVMYTCL--VDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQ 1525

Query: 107  VQESVKIFDIMKQLGVERSVKSYD----------------ALFKLILRRGRYM------- 143
            + ++   F  M+  GV  ++ +Y+                +L+  ++R G +        
Sbjct: 1526 MMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHS 1585

Query: 144  ------------MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
                        +  +   KM+ EG    + T+N+++  +  S K+  A      M + G
Sbjct: 1586 LILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLG 1645

Query: 192  ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
            +  D  TYN + NG N+     E+  +  EM E  + P    Y T+I G   V     A 
Sbjct: 1646 VFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAF 1705

Query: 252  RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            ++ DEM++     + V  +A++ GL   GK  +   VL  M+   + P   + F  L+  
Sbjct: 1706 KLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTI-ATFTTLMHR 1764

Query: 312  QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII-- 369
             C+   +  A  +   M    +  +   Y +LI   C       A +L +++  +++   
Sbjct: 1765 FCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1824

Query: 370  LRPQSTLDMEASSYNPMIQ 388
            +   + L    S+ N +IQ
Sbjct: 1825 ITTYAVLVDAISAANNLIQ 1843



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 128/279 (45%), Gaps = 5/279 (1%)

Query: 26   VYNVL-HGAKNSEHALQF---FRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
             YN+L HG    +  L++   +  + R G+F  D+ T   +I  L + G  +    +L  
Sbjct: 1547 TYNILLHGFSKKQALLRYLSLYSTMMREGIFP-DKLTFHSLILGLSKSGIPDLGVKLLGK 1605

Query: 82   MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
            M  +G   D+  F +LI  Y + G ++++  + + M  LGV     +Y+ +F  + ++  
Sbjct: 1606 MIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSA 1665

Query: 142  YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            +  +    ++ML  G+ P    Y  ++ G      ++ A +  ++M++ G     V  + 
Sbjct: 1666 FRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESA 1725

Query: 202  MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            M+ G     K ++A  +   M    + PT+ ++TT++  +    +  +AL++   M+   
Sbjct: 1726 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1785

Query: 262  VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
            +K + V Y  L+ G+C  G      ++  EM  R + P 
Sbjct: 1786 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1824



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 36/247 (14%)

Query: 16   ALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
             L  QF  N++ N    +     A     ++   G+F  DR+T+  +   L +      +
Sbjct: 1611 TLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP-DRDTYNHIFNGLNKKSAFRES 1669

Query: 76   RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
              +L +M + GV      +  LI    + G +Q + K+ D M+ LG      +  A+ + 
Sbjct: 1670 TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 1729

Query: 136  ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
            +L  G+   A    + ML   + PT  T+  ++  F    K+  A++    M+  G+ LD
Sbjct: 1730 LLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLD 1789

Query: 196  VVTYNTMING-------------YNRFKKMD----------------------EAEKLFA 220
            VV YN +I G             Y   +  D                      + EKL  
Sbjct: 1790 VVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLT 1849

Query: 221  EMKEKNI 227
            +++E+ +
Sbjct: 1850 DLQERGL 1856


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 258/541 (47%), Gaps = 30/541 (5%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G   S+ +Y+A+  L L       A+R    ML +G+ P  +TYN+++       + E A
Sbjct: 115 GYAPSLLAYNAVL-LALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 181 IRFF-EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           +    +DM+  G + +VVTYNT++  + R  ++D AE+L   M+E  + P+++++ T++ 
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G     R +DA ++FDEM    + P+ V+Y  L+ G C AG + E   V  EM ++ + P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D   F  L+   C++G+L  A  ++  M    +      +  LI+ FC+    D A+  
Sbjct: 294 -DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
           + ++  +E  ++P          YN +I   C  G+  +A     ++  KG+  D V ++
Sbjct: 353 MKEM--RECRIQPSVV------CYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYS 404

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            ++ G+ K G+ DSAFE+ + M ++GV  DA  Y  LI     +    DA    + M++ 
Sbjct: 405 TILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQL 464

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P    + ++++   ++G VQ A  +   M++KGV  ++   + +++ L      +EA
Sbjct: 465 GLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEA 524

Query: 539 LG---------------RIDLMMQSGSVPNFDSLLSVL---SEKGKTIAAVKLLDFCLGR 580
                            + + +M       F S++++L   S KG    A K+    L R
Sbjct: 525 QRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDR 584

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              +D + Y  ++      G  + A S   +++  G   +  S+  L+ GL +EG T +A
Sbjct: 585 HWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEA 644

Query: 641 D 641
           D
Sbjct: 645 D 645



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 258/531 (48%), Gaps = 33/531 (6%)

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSY 129
            L  AR +L  M + GV  +   + +L+ +   +G  +E++ +  D M+  G   +V +Y
Sbjct: 134 SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTY 193

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     R G    A+R    M   G+ P+  T+N ++ G   + ++E A + F++M  
Sbjct: 194 NTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAR 253

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G++ D V+YNT+++GY +   + EA  +FAEM +K + P V+++T++I         + 
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A+ +  +M+   ++ N  T+TAL+ G C  G + +    ++EM E  I P     +  L+
Sbjct: 314 AVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPS-VVCYNVLI 372

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              CK G ++ A +++  M    +  +   Y  ++  +CK    D A +L  K+++K ++
Sbjct: 373 NGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVV 432

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
             P      +A +Y+ +I+ LC   + G A   F ++++ G+  D   +  LI GH KEG
Sbjct: 433 --P------DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEG 484

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL-----DSMIEDG---- 479
           N   A  +   M ++GV  D   Y  LI+   +     +A+  L     +  + D     
Sbjct: 485 NVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYE 544

Query: 480 ---HSPASSLFRSV---MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
              H   ++ F+SV   ++     G +  A +V +SM+++  K +  + + ++      G
Sbjct: 545 ALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGG 604

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSV---LSEKGKTIAA----VKLLDFC 577
           ++ +AL     +++ G  PN  S +S+   L E+G T+ A     +LL+ C
Sbjct: 605 NIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCC 655



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 213/446 (47%), Gaps = 28/446 (6%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L + G++  AR +  +M ++G+  D   +  L+  Y K G + E++ +F  M Q GV   
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V ++ +L   + R G    A     +M   G+     T+  ++ GF  +  L+ A+   +
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+   I   VV YN +INGY +  +MDEA +L  EM+ K ++P V++Y+T++ GY  + 
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             D A  +  +M    V P+A+TY++L+ GLC+  ++ +  ++  +M++  + P D   +
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQP-DEFTY 473

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             L+   CK G++  A  +   MI+  +  +   Y +LI+   K+     A +LL KL  
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYY 533

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHS 425
           ++ +      +  EA      + H C   +       F+ ++            L++G S
Sbjct: 534 EDPV---PDNIKYEA------LMHCCRTAE-------FKSVVA-----------LLKGFS 566

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
            +G  + A ++ + M  R    D   Y  LI  + R G    A +    ++  G SP S+
Sbjct: 567 MKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNST 626

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMV 511
              S++  LFE+G    A  V++ ++
Sbjct: 627 STISLVRGLFEEGMTVEADNVIQELL 652



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 199/458 (43%), Gaps = 50/458 (10%)

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G +  ++ YN ++   +    +  A +L A M    + P V +Y  +++   A  + ++A
Sbjct: 115 GYAPSLLAYNAVLLALSD-ASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 251 LRIF-DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           L +  D+M+     PN VTY  L+   C AG++        +  ER            L+
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEV--------DAAER------------LV 213

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
           GV  + G            +R S+ T    +  ++   CKA   + A K+ D++      
Sbjct: 214 GVMREGG------------VRPSLVT----FNTVVNGLCKAGRMEDARKMFDEMA----- 252

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
              +  L  +  SYN ++   C  G   +A   F ++ +KGV+ D V F +LI    + G
Sbjct: 253 ---REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAG 309

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           N + A  +V  M  RG+  +   +  LI+ + R G   DA  A+  M E    P+   + 
Sbjct: 310 NLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYN 369

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            ++    + GR+  A  ++  M  KG+K ++   + IL      G  + A      M++ 
Sbjct: 370 VLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK 429

Query: 549 GSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
           G VP+   + SL+  L E+ +   A +L +  L      D  +Y  ++D     G    A
Sbjct: 430 GVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKA 489

Query: 606 YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            S+  ++++KG + D  +   LI GL++   TK+A  L
Sbjct: 490 LSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 270/580 (46%), Gaps = 18/580 (3%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L R  ++N A+    +M K G++ D +    LI+ + ++G + E ++I D+M   G+  +
Sbjct: 219 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 278

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           + +Y+ L   + + G+   A      M++ G +P   T+ +++ G+     +  A+   +
Sbjct: 279 LITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLD 338

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+ R +    V+Y  MING    K +  A KL  +M    ++P V+ Y+T+I GY +  
Sbjct: 339 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEG 398

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           R ++A R+ D M    V P+   Y A++  L  AGKM E    L E+  R + P   +  
Sbjct: 399 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 458

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             +LG   K+G +  AA     M+   +      Y +LI    KA            L+E
Sbjct: 459 AFILGYS-KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA----------GNLME 507

Query: 366 KEIILRPQSTLDM--EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
              I R    L +  +  + +  I  L  NG+  +A   F +L +KG++ D   +++LI 
Sbjct: 508 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 567

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  K+G  + AFE+   M  +G+  +   Y  L++   + G+   A+   D M E G  P
Sbjct: 568 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 627

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            S  + ++++   +   V  A  +   M  KGV+ +  +   ++      G +E+A+   
Sbjct: 628 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 687

Query: 543 DLMMQSG--SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
             M+Q G  +  +F++L+    +  K   A +L    + +  + D  +Y  V+D    AG
Sbjct: 688 REMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 747

Query: 601 KTLNAYSILFKIM-EKGGVTDWKSSDKLIAGLNQEGNTKQ 639
           K   A ++LFK M E+  + D  +   L+ G N+ G + +
Sbjct: 748 KMEEA-NLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSE 786



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 239/496 (48%), Gaps = 12/496 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N + + L  A   E A  +   ++  GL   D  T    I    + GK+  A     
Sbjct: 420 FCYNAIISCLSKAGKMEEASTYLLEIQGRGL-KPDAVTFGAFILGYSKTGKMTEAAKYFD 478

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G+  +  ++ VLI  + K G + E++ IF  +  LGV   V++  A    +L+ G
Sbjct: 479 EMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNG 538

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A + F+++  +G+ P   TY+ ++ GF    ++E A    ++M  +GI+ ++  YN
Sbjct: 539 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 598

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +++G  +   +  A KLF  M EK +EP  ++Y+TMI GY   E   +A  +F EM S 
Sbjct: 599 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 658

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V+P++  Y AL+ G C  G M +   + REM+++      +  F  L+   CKS  +  
Sbjct: 659 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS--FNTLIDGYCKSCKIQE 716

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A+ + + MI   I  +   Y  +I+  CKA   + A  L  ++ E+ +I+        + 
Sbjct: 717 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV--------DT 768

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y  ++      GQ+ +    F +++ KGV  D V +  +I  H KE N   AF++   
Sbjct: 769 VTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 828

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +  +G+      +  LI +  ++ +  +A   LD M E G  P+ +   +++ S  E G+
Sbjct: 829 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 888

Query: 500 VQTASRVMKSMVEKGV 515
           +  A+RV + +   G+
Sbjct: 889 MDEATRVFEGVKSLGL 904



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 246/502 (49%), Gaps = 11/502 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + GK+  A   LL++  +G++ D   F   I  Y K G + E+ K FD M   G
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +   Y  L     + G  M A   F  + + G+ P   T +  + G   + +++ A+
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F ++K +G+  DV TY+++I+G+ +  ++++A +L  EM  K I P +  Y  ++ G 
Sbjct: 545 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                   A ++FD M    ++P++VTY+ ++ G C +  + E   +  EM  + + P  
Sbjct: 605 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH- 663

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           + V+  L+   CK G +  A ++ + M++    T    +  LI+ +CK+     A +L  
Sbjct: 664 SFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQ 722

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNL 420
           +++ K+I+  P         +Y  +I   C  G+  +A + F+++ ++  ++D V + +L
Sbjct: 723 EMIAKQIM--PDHV------TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 774

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G++K G     F + + M  +GV  D   Y  +I ++ ++    +A    D ++  G 
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
               ++   ++ +L +   +  AS+++  M E G+K +L   + ++ +    G ++EA  
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 894

Query: 541 RIDLMMQSGSVPNFDSLLSVLS 562
             + +   G VP+  +L+ +++
Sbjct: 895 VFEGVKSLGLVPDTTTLIDLVN 916



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 139/599 (23%), Positives = 273/599 (45%), Gaps = 17/599 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L + GK+  A  IL  M   G + +   F +LIE Y ++  +  ++++ D M
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 340

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ++  +  S  SY A+   +       +A +   KM   G++P    Y+ ++ G+    ++
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A R  + M   G++ D+  YN +I+  ++  KM+EA     E++ + ++P  +++   
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY    +  +A + FDEM    + PN   YT L+ G   AG ++E   + R +    +
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P   +    + G+  K+G +  A  V   +    +  +   Y  LI  FCK    ++A 
Sbjct: 521 LPDVQTCSAFIHGLL-KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           +L D++  K I   P   +      YN ++  LC +G   +A   F  + +KG+  D V 
Sbjct: 580 ELHDEMCLKGI--APNIFI------YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 631

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           ++ +I G+ K  N   AF +   M  +GV   +  Y  L+    ++G+   A      M+
Sbjct: 632 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 691

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           + G +   S F ++++   +  ++Q AS++ + M+ K +  +      +++     G +E
Sbjct: 692 QKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 750

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA      M +   + +   + SL+   ++ G++     L +  + +    D  +Y  V+
Sbjct: 751 EANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 810

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL-NQEGNTKQADILSRMIRGEM 651
            A       + A+ +  +++ KG +T     D LI  L  +E  T+ + +L  M  GE+
Sbjct: 811 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM--GEL 867



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 245/582 (42%), Gaps = 90/582 (15%)

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           Q+GV + + S+  L   +     + +A     +M+      +    +V+ W         
Sbjct: 97  QMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFW--------- 147

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF------------------A 220
                    ++ G S  VV ++ +I+ Y R   +DEA  +F                   
Sbjct: 148 --------FRNYGGSSPVV-FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLR 198

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
            M EK + P   +YT +  G    +R ++A   F+EM+   +KP+    +AL+ G    G
Sbjct: 199 SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 258

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            + EV ++   MV   IP    +  + + G+ CK G +  AA++LK MI L     +  +
Sbjct: 259 DIDEVLRIKDVMVSCGIPINLITYNVLIHGL-CKFGKMEKAAEILKGMITLGCKPNSRTF 317

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
            +LIE +C+     RA++LLD++ ++ ++  P       A SY  MI  LCH      A 
Sbjct: 318 CLLIEGYCREHNMGRALELLDEMEKRNLV--PS------AVSYGAMINGLCHCKDLSLAN 369

Query: 401 IFFRQLMKKGVLDP--VAFNNLIRGHSKEGN-----------------PD---------- 431
               ++   G L P  V ++ LI G++ EG                  PD          
Sbjct: 370 KLLEKMTFSG-LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 428

Query: 432 ---------SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
                    ++  +++I G RG+  DA  +   I  Y + G+  +A    D M++ G  P
Sbjct: 429 LSKAGKMEEASTYLLEIQG-RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 487

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            + L+  ++   F+ G +  A  + + +   GV  ++   +  +  LL  G V+EAL   
Sbjct: 488 NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 547

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD-FCLGRDCIIDLASYEKVLDALLA 598
             + + G VP+   + SL+S   ++G+   A +L D  CL +    ++  Y  ++D L  
Sbjct: 548 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL-KGIAPNIFIYNALVDGLCK 606

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +G    A  +   + EKG   D  +   +I G  +  N  +A
Sbjct: 607 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 648



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 134/280 (47%), Gaps = 16/280 (5%)

Query: 23  HNLVYNVL-HGA---KNSEHALQFFRWVERAGL-----FNHDRETHLKMIEILGRVGKLN 73
           H+ VYN L HG     + E A+  FR + + G      FN        +I+   +  K+ 
Sbjct: 663 HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-------TLIDGYCKSCKIQ 715

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +  +M  K +  D   +  +I+ + K G ++E+  +F  M++  +     +Y +L 
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
               + G+       F KM+++G++P   TY ++++       L  A +  +++  +G+ 
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
                ++ +I    + + + EA KL  EM E  ++P++ + +T+++ +    + D+A R+
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           F+ +KS  + P+  T   L+ G  +     + + +++++V
Sbjct: 896 FEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/595 (24%), Positives = 273/595 (45%), Gaps = 18/595 (3%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A+QFF W      + HD  ++  +++IL + G       +  D+   G   +   F++LI
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
               K G    +++    + +  V   V  ++ L   + + G    A + F  M S  ++
Sbjct: 70  RGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVK 129

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG--ISLDVVTYNTMINGYNRFKKMDEAE 216
           P   TYN ++ G   S  LE A    E+M  +G   + D+VTYNT+IN + R  ++ EA 
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREAC 189

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
               +MK   I P V++   ++ G       ++AL I D MK     P+ +TY +++  L
Sbjct: 190 AFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHAL 249

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C AGK+VE  ++L+ M        D   F  LL   CK+G L  A +VL+ M R +I  +
Sbjct: 250 CVAGKVVEAAEILKTMS----CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y IL+   C+      A  LL+++V +  I         +  +Y  ++  LC +G+ 
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI--------PDVIAYTSLVDGLCKSGEI 357

Query: 397 GKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A    +++  +G    V  +++L+ G+ + GN   A EI+  M    +      Y  +
Sbjct: 358 EEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           +   ++ G  + A + +  ++  G+ P    + ++++ L +  RV+ A  +   M  +G 
Sbjct: 418 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGC 477

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             N   +  ++  L   G V++A   +  M +    PN   + SL+  L +  +   A  
Sbjct: 478 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACM 537

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
           +LD   G+   +D  +Y K++ ++   G+   A ++  +++ +G + D  +S  L
Sbjct: 538 VLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 203/474 (42%), Gaps = 16/474 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           +N V + L  + N E A +     + + G    D  T+  +I    R  ++  A      
Sbjct: 135 YNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREK 194

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G+  D     +L+    K G V+E+++I D MK  G    V +Y+++   +   G+
Sbjct: 195 MKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGK 254

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            + A      M      P   T+N +L GF  +  L  A+   E+M    I  DV+TY  
Sbjct: 255 VVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 311

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++NG  R  ++  A  L  E+  +   P VI+YT+++ G       ++A ++  EM    
Sbjct: 312 LVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG 371

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNA 320
            +   V Y++L+ G C AG + + +++L EMV    +PP     +  +LG   K G ++ 
Sbjct: 372 CRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPL--FTYNIVLGGLIKDGSISK 429

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  ++  ++      +   Y  LI+  CKA     A  L D++  +     P        
Sbjct: 430 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCF--PNDV----- 482

Query: 381 SSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +   ++  LC  G+   A  +      K+   + V + +LI G  K    D A  ++  
Sbjct: 483 -TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDA 541

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           M  +GV  D  AY  LI S    G  A+A    D M+  G  P  S  +++ E+
Sbjct: 542 MRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 595



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 9/265 (3%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           ++  +I+  C  GQ  +A  F R L +  V  D   FN LI G  K+GNPD A ++ + M
Sbjct: 64  TFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM 123

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL--FRSVMESLFEDG 498
               V  +   Y  +I    + G    A+  L+ MI  G   A  +  + +++ + +   
Sbjct: 124 ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRAS 183

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           R++ A    + M   G+  ++     ++  +   G VEEAL  +D M  +G VP+   ++
Sbjct: 184 RIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYN 243

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           S++  L   GK + A ++L       C  DL ++  +LD    AG    A  +L ++  +
Sbjct: 244 SIIHALCVAGKVVEAAEILK---TMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQA 640
             + D  +   L+ GL + G  + A
Sbjct: 301 NILPDVITYTILVNGLCRVGQVQVA 325


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 247/518 (47%), Gaps = 13/518 (2%)

Query: 61   KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            K++  + ++ K +    +   M   G+  +   + +LI  + ++  +  ++ +   M +L
Sbjct: 700  KLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL 759

Query: 121  GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
            G E ++ +  +L        R   A    ++M   G +P   T+N ++ G FL  K   A
Sbjct: 760  GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 819

Query: 181  IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            +   + M ++G   D+VTY  ++NG  +    D A  L  +M++  +EP V+ Y T+I G
Sbjct: 820  MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 879

Query: 241  YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                +  DDAL +F EM++  ++PN VTY++L+  LC+ G+  +  ++L +M+ER I P 
Sbjct: 880  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP- 938

Query: 301  DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
            D   F  L+    K G L  A  +   M++ SI      Y  LI  FC  +  D A ++ 
Sbjct: 939  DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998

Query: 361  DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
            + +V K     P      +  +YN +I+  C   +  +    FR++ ++G++ + V +N 
Sbjct: 999  EFMVSKHCF--P------DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050

Query: 420  LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            LI+G  + G+ D A EI K M   GVP +   Y  L++   + G+   A    + +    
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110

Query: 480  HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
              P    +  ++E + + G+V+    +  ++  KGVK ++     ++     +G  EEA 
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 1170

Query: 540  GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
                 M + G++PN   +++L+      G   A+ +L+
Sbjct: 1171 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 1208



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 222/490 (45%), Gaps = 31/490 (6%)

Query: 54   HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
            H+  T+  +I    R  +L  A  +L  M K G + +      L+  Y     + E+V +
Sbjct: 728  HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787

Query: 114  FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
             D M   G + +  +++ L   +    +   A    ++M+++G +P   TY V++ G   
Sbjct: 788  VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847

Query: 174  SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
                + A      M+   +   V+ YNT+I+G  ++K MD+A  LF EM+ K I P V++
Sbjct: 848  RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907

Query: 234  YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
            Y+++I       R  DA R+  +M    + P+  T++AL+      GK+VE +K+  EMV
Sbjct: 908  YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967

Query: 294  ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
            +R I P   + +  L+   C    L+ A  + + M+      +   Y  LI+ FCK +  
Sbjct: 968  KRSIDPSIVT-YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 1026

Query: 354  DRAIKLLDKLVEKEII------------LRPQSTLDMEAS---------------SYNPM 386
            +  +++  ++ ++ ++            L      DM                  +YN +
Sbjct: 1027 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 1086

Query: 387  IQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
            +  LC NG+  KA + F + +++  ++P    +N +I G  K G  +  +++   +  +G
Sbjct: 1087 LDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 1145

Query: 445  VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
            V  D  AY  +I  + RKG   +A      M EDG  P S  + +++ +   DG  + ++
Sbjct: 1146 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 1205

Query: 505  RVMKSMVEKG 514
             ++K M   G
Sbjct: 1206 ELIKEMRSCG 1215



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 189/372 (50%), Gaps = 11/372 (2%)

Query: 93   MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            ++  +I+   K   + +++ +F  M+  G+  +V +Y +L   +   GR+  A R  + M
Sbjct: 872  IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 931

Query: 153  LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            +   I P   T++ ++  F    KL  A + +++M  R I   +VTY+++ING+    ++
Sbjct: 932  IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991

Query: 213  DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            DEA+++F  M  K+  P V++Y T+IKG+   +R ++ + +F EM    +  N VTY  L
Sbjct: 992  DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051

Query: 273  LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
            + GL  AG     Q++ +EMV   +PP +   +  LL   CK+G L  A  V + + R  
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPP-NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110

Query: 333  IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
            +      Y I+IE  CKA   +    L   L  K +  +P      +  +YN MI   C 
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV--KP------DVVAYNTMISGFCR 1162

Query: 393  NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             G   +A+  F+++ + G L +   +N LIR   ++G+ +++ E++K M   G   DA +
Sbjct: 1163 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA-S 1221

Query: 452  YICLIESYLRKG 463
             I L+ + L  G
Sbjct: 1222 TIGLVTNMLHDG 1233



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 142/636 (22%), Positives = 271/636 (42%), Gaps = 52/636 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +  ++N A     ++ +KG++ +   +  L+          ++ ++   M +  
Sbjct: 299 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 358

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V +Y AL    ++ G+ + AK  F +M+   I+P   TY+ ++ G  L  +++ A 
Sbjct: 359 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 418

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F+ M S+G   DVV+YNT+ING+ + K++++  KLF EM ++ +    ++Y T+I+G+
Sbjct: 419 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 478

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 D A   F +M  F + P+  TY  LL GLCD G++ +   +  +M +R +   D
Sbjct: 479 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL-D 537

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++   CK+G +  A  +  ++    +  +   Y  ++   C   +      L  
Sbjct: 538 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 597

Query: 362 K------------LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ-----------TGK 398
           K            L + +I L  +    M +  Y P +     +G            +GK
Sbjct: 598 KMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGK 657

Query: 399 AEIFFRQLMKKGVL------DPVA----------------FNNLIRGHSKEGNPDSAFEI 436
               +R+ + +  L      D VA                F+ L+   +K    D    +
Sbjct: 658 TSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISL 717

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
            + M   G+P +   Y  LI  + R+ +   A   L  M++ G+ P      S++     
Sbjct: 718 GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 777

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
             R+  A  ++  M   G + N      ++  L +     EA+  ID M+  G  P+   
Sbjct: 778 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 837

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +  +++ L ++G T  A  LL+          +  Y  ++D L       +A + LFK M
Sbjct: 838 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN-LFKEM 896

Query: 614 EKGGV-TDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           E  G+  +  +   LI+ L   G    A  +LS MI
Sbjct: 897 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 212/454 (46%), Gaps = 11/454 (2%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++ +F  M +     S+  ++ L   I++  +Y +      KM   GI    +T+N+
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    ++  A+     M   G   D VT  +++NG+ R  ++ +A  L  +M E  
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P +++Y  +I      +R +DA   F E++   ++PN VTYTAL+ GLC++ +  +  
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           ++L +M+++ I P +   +  LL    K+G +  A ++ + M+R+SI  +   Y  LI  
Sbjct: 349 RLLSDMIKKKITP-NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C  +  D A ++ D +V K  +         +  SYN +I   C   +       FR++
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCL--------ADVVSYNTLINGFCKAKRVEDGMKLFREM 459

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            ++G++ + V +N LI+G  + G+ D A E    M   G+  D   Y  L+      GE 
Sbjct: 460 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 519

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A    + M +         + +V+  + + G+V+ A  +  S+  KG+K ++     +
Sbjct: 520 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 579

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
           +  L  +G + E       M Q G + N D  LS
Sbjct: 580 MSGLCTKGLLHEVEALYTKMKQEGLMKN-DCTLS 612



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 151/709 (21%), Positives = 305/709 (43%), Gaps = 87/709 (12%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           K R      D N + + +   K  +  +   + +E  G+ N D  T   +I       ++
Sbjct: 181 KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN-DLYTFNIVINCFCCCFQV 239

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  IL  M K G + D      L+  + ++  V ++V + D M ++G +  + +Y+A+
Sbjct: 240 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 299

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + +  R   A  +F ++  +GI P   TY  ++ G   S +   A R   DM  + I
Sbjct: 300 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 359

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
           + +V+TY+ +++ + +  K+ EA++LF EM   +I+P +++Y+++I G    +R D+A +
Sbjct: 360 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 419

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +FD M S     + V+Y  L+ G C A ++ +  K+ REM +R +   +   +  L+   
Sbjct: 420 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL-VSNTVTYNTLIQGF 478

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
            ++G ++ A +    M    I  +   Y IL+   C     ++A+ + + + ++E     
Sbjct: 479 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE----- 533

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
              +D++  +Y  +I+ +C  G+  +A   F  L  KG+  D V +  ++ G   +G   
Sbjct: 534 ---MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 590

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP--------- 482
               +   M + G+ ++        +  L  G+   +   +  M+  G++P         
Sbjct: 591 EVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSG 642

Query: 483 ----ASSLFRSVM--------ESLFEDGRVQ-------------TASRVMKSMVE----- 512
               A SL R+          E L  +G  +               SR   S++E     
Sbjct: 643 VCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLL 702

Query: 513 ---------------------KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
                                 G+  N    + ++     R  +  AL  +  MM+ G  
Sbjct: 703 SAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE 762

Query: 552 PNFDSLLSVLS---EKGKTIAAVKLLD--FCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
           PN  +L S+L+      +   AV L+D  F  G     +  ++  ++  L    K   A 
Sbjct: 763 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ--PNTVTFNTLIHGLFLHNKASEAM 820

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMSRG 654
           +++ +++ KG   D  +   ++ GL + G+T  A ++L++M +G++  G
Sbjct: 821 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 869



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/539 (20%), Positives = 233/539 (43%), Gaps = 44/539 (8%)

Query: 107  VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
            + ++V +F  M +     S+  +  L   I +  ++ +      +M + GI    +TY++
Sbjct: 676  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735

Query: 167  MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
            ++  F    +L  A+     M   G   ++VT ++++NGY   K++ EA  L  +M    
Sbjct: 736  LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 227  IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             +P  +++ T+I G     +A +A+ + D M +   +P+ VTY  ++ GLC  G      
Sbjct: 796  YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 287  KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
             +L +M +  + P    ++  ++   CK  H++ A ++ K M    I      Y  LI  
Sbjct: 856  NLLNKMEQGKLEP-GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 347  FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
             C    +  A +LL  ++E++I        + +  +++ +I      G+  +AE  + ++
Sbjct: 915  LCNYGRWSDASRLLSDMIERKI--------NPDVFTFSALIDAFVKEGKLVEAEKLYDEM 966

Query: 407  MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
            +K+ + DP  V +++LI G       D A ++ + M  +    D   Y  LI+ + +   
Sbjct: 967  VKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025

Query: 465  PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              +       M + G    +  +  +++ LF+ G    A  + K MV  GV  N+     
Sbjct: 1026 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 1085

Query: 525  ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
            +L+ L   G +E+A+   + + +S   P                                
Sbjct: 1086 LLDGLCKNGKLEKAMVVFEYLQRSKMEPT------------------------------- 1114

Query: 585  DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
             + +Y  +++ +  AGK  + + +   +  KG   D  + + +I+G  ++G+ ++AD L
Sbjct: 1115 -IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 1172



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 182/377 (48%), Gaps = 11/377 (2%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N + + L   K+ + AL  F+ +E  G+   +  T+  +I  L   G+ + A  +L DM
Sbjct: 873  YNTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDM 931

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             ++ +  D   F  LI+++ K+G + E+ K++D M +  ++ S+ +Y +L        R 
Sbjct: 932  IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              AK+ F  M+S+   P   TYN ++ GF    ++E  +  F +M  RG+  + VTYN +
Sbjct: 992  DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I G  +    D A+++F EM    + P +++Y T++ G     + + A+ +F+ ++   +
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111

Query: 263  KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            +P   TY  ++ G+C AGK+ +   +   +  + + P D   +  ++   C+ G    A 
Sbjct: 1112 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP-DVVAYNTMISGFCRKGSKEEAD 1170

Query: 323  DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
             + K M        +G Y  LI    +A + D      D+    E+I   +S      +S
Sbjct: 1171 ALFKEMKEDGTLPNSGCYNTLI----RARLRDG-----DREASAELIKEMRSCGFAGDAS 1221

Query: 383  YNPMIQHLCHNGQTGKA 399
               ++ ++ H+G+  K+
Sbjct: 1222 TIGLVTNMLHDGRLDKS 1238



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 189/421 (44%), Gaps = 13/421 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F+ M+     P+   +N +L       K +  I   + M+  GI  D+ T+N +IN +  
Sbjct: 176 FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 235

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++  A  +  +M +   EP  ++  +++ G+    R  DA+ + D+M     KP+ V 
Sbjct: 236 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 295

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y A++  LC   ++ +     +E+  + I P +   +  L+   C S   + AA +L  M
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRP-NVVTYTALVNGLCNSSRWSDAARLLSDM 354

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           I+  I      Y  L++ F K      A +L +++V   I        D +  +Y+ +I 
Sbjct: 355 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI--------DPDIVTYSSLIN 406

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC + +  +A   F  ++ KG L D V++N LI G  K    +   ++ + M +RG+  
Sbjct: 407 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 466

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +   Y  LI+ + + G+   A+     M   G SP    +  ++  L ++G ++ A  + 
Sbjct: 467 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 526

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           + M ++ +  ++     ++  +   G VEEA      +   G  P+   + +++S L  K
Sbjct: 527 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 586

Query: 565 G 565
           G
Sbjct: 587 G 587


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 247/518 (47%), Gaps = 13/518 (2%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K++  + ++ K +    +   M   G+  +   + +LI  + ++  +  ++ +   M +L
Sbjct: 86  KLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL 145

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G E ++ +  +L        R   A    ++M   G +P   T+N ++ G FL  K   A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +   + M ++G   D+VTY  ++NG  +    D A  L  +M++  +EP V+ Y T+I G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +  DDAL +F EM++  ++PN VTY++L+  LC+ G+  +  ++L +M+ER I P 
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP- 324

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  L+    K G L  A  +   M++ SI      Y  LI  FC  +  D A ++ 
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + +V K     P      +  +YN +I+  C   +  +    FR++ ++G++ + V +N 
Sbjct: 385 EFMVSKHCF--P------DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI+G  + G+ D A EI K M   GVP +   Y  L++   + G+   A    + +    
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  ++E + + G+V+    +  ++  KGVK ++     ++     +G  EEA 
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
                M + G++PN   +++L+      G   A+ +L+
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 222/490 (45%), Gaps = 31/490 (6%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           H+  T+  +I    R  +L  A  +L  M K G + +      L+  Y     + E+V +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
            D M   G + +  +++ L   +    +   A    ++M+++G +P   TY V++ G   
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
               + A      M+   +   V+ YNT+I+G  ++K MD+A  LF EM+ K I P V++
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y+++I       R  DA R+  +M    + P+  T++AL+      GK+VE +K+  EMV
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +R I P   + +  L+   C    L+ A  + + M+      +   Y  LI+ FCK +  
Sbjct: 354 KRSIDPSIVT-YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412

Query: 354 DRAIKLLDKLVEKEII------------LRPQSTLDMEAS---------------SYNPM 386
           +  +++  ++ ++ ++            L      DM                  +YN +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +  LC NG+  KA + F + +++  ++P    +N +I G  K G  +  +++   +  +G
Sbjct: 473 LDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V  D  AY  +I  + RKG   +A      M EDG  P S  + +++ +   DG  + ++
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591

Query: 505 RVMKSMVEKG 514
            ++K M   G
Sbjct: 592 ELIKEMRSCG 601



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 188/372 (50%), Gaps = 11/372 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++  +I+   K   + +++ +F  M+  G+  +V +Y +L   +   GR+  A R  + M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +   I P   T++ ++  F    KL  A + +++M  R I   +VTY+++ING+    ++
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           DEA+++F  M  K+  P V++Y T+IKG+   +R ++ + +F EM    +  N VTY  L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GL  AG     Q++ +EMV   +PP +   +  LL   CK+G L  A  V + + R  
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPP-NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y I+IE  CKA   +    L   L  K +  +P      +  +YN MI   C 
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV--KP------DVVAYNTMISGFCR 548

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G   +A+  F+++ + G L +   +N LIR   ++G+ +++ E++K M   G   DA  
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608

Query: 452 YICLIESYLRKG 463
            I L+ + L  G
Sbjct: 609 -IGLVTNMLHDG 619



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/539 (20%), Positives = 233/539 (43%), Gaps = 44/539 (8%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + ++V +F  M +     S+  +  L   I +  ++ +      +M + GI    +TY++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    +L  A+     M   G   ++VT ++++NGY   K++ EA  L  +M    
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P  +++ T+I G     +A +A+ + D M +   +P+ VTY  ++ GLC  G      
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +L +M +  + P    ++  ++   CK  H++ A ++ K M    I      Y  LI  
Sbjct: 242 NLLNKMEQGKLEP-GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C    +  A +LL  ++E++I        + +  +++ +I      G+  +AE  + ++
Sbjct: 301 LCNYGRWSDASRLLSDMIERKI--------NPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 407 MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +K+ + DP  V +++LI G       D A ++ + M  +    D   Y  LI+ + +   
Sbjct: 353 VKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +       M + G    +  +  +++ LF+ G    A  + K MV  GV  N+     
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           +L+ L   G +E+A+   + + +S   P                                
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPT------------------------------- 500

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            + +Y  +++ +  AGK  + + +   +  KG   D  + + +I+G  ++G+ ++AD L
Sbjct: 501 -IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 182/377 (48%), Gaps = 11/377 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L   K+ + AL  F+ +E  G+   +  T+  +I  L   G+ + A  +L DM
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDM 317

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ +  D   F  LI+++ K+G + E+ K++D M +  ++ S+ +Y +L        R 
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             AK+ F  M+S+   P   TYN ++ GF    ++E  +  F +M  RG+  + VTYN +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G  +    D A+++F EM    + P +++Y T++ G     + + A+ +F+ ++   +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P   TY  ++ G+C AGK+ +   +   +  + + P D   +  ++   C+ G    A 
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP-DVVAYNTMISGFCRKGSKEEAD 556

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            + K M        +G Y  LI    +A + D      D+    E+I   +S      +S
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLI----RARLRDG-----DREASAELIKEMRSCGFAGDAS 607

Query: 383 YNPMIQHLCHNGQTGKA 399
              ++ ++ H+G+  K+
Sbjct: 608 TIGLVTNMLHDGRLDKS 624


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 232/477 (48%), Gaps = 10/477 (2%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           ++ +M K+ V  D     V++++  + G  + ++ + D M   G++  + +Y+++ K + 
Sbjct: 178 VISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 237

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G +  A   F +M   G+ P   ++ +++ GF    ++E A++ +++M+ RGI  D+V
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 297

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           +++ +I  + R  KMD A     EM+   + P  + YT +I G+       DALR+ DEM
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
                 P+ VTY  LL GLC   ++++ + +L EM ER +PP D   F  L+   C  G 
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP-DLCTFTTLIHGYCIEGK 416

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           L+ A  +   M+   +  +   Y  LI+  C+    D+A  L D +  +EI   P     
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIF--PNHV-- 472

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
               +Y+ +I   C  GQ   A  F  +++ KG+L  +  +N++I+G+ + GN     + 
Sbjct: 473 ----TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKF 528

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M    V  D   Y  LI  Y+++ +  DA   L+ M ++   P    +  ++     
Sbjct: 529 LQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV 588

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            G VQ A  + + M  KG++ +      ++   +  G+ +EA    D M+Q G  P+
Sbjct: 589 HGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 226/470 (48%), Gaps = 12/470 (2%)

Query: 15  RALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P    HN++ +    A ++E A+     +   GL      T+  +++ L R G  +
Sbjct: 185 RCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGL-KPGIVTYNSVLKGLCRSGMWD 243

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +  +M   GV  D   F +LI  + + G ++E++KI+  M+  G++  + S+  L 
Sbjct: 244 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 303

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
            L  RRG+   A  Y  +M   G+ P    Y +++ GF  +  +  A+R  ++M   G  
Sbjct: 304 GLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL 363

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DVVTYNT++NG  + +++ +AE L  EM+E+ + P + ++TT+I GY    + D AL++
Sbjct: 364 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 423

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           FD M +  ++P+ VTY  L+ G+C  G + +   +  +M  R I P ++  +  L+   C
Sbjct: 424 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP-NHVTYSILIDSHC 482

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           + G +  A   L  MI   I      Y  +I+ +C++    +  K L K++  ++     
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV----- 537

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
                +  +YN +I       +   A      + K+ V  D V +N LI G S  GN   
Sbjct: 538 ---SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 594

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           A  I + M  +G+  D   Y+ +I  ++  G   +A    D M++ G +P
Sbjct: 595 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 251/552 (45%), Gaps = 13/552 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++LI +Y +    +E+ + F ++    V     + +AL   + R G   +A   +  +
Sbjct: 88  VFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLV 147

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            S   E   +T N+M+  +  +L+ +       +M+ R +  DVVT+N M++   R    
Sbjct: 148 FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDA 207

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A  L   M  K ++P +++Y +++KG       D A  +F EM  F V P+  ++T L
Sbjct: 208 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 267

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G++ E  K+ +EM  R I P D   F  L+G+  + G ++ A   L+ M    
Sbjct: 268 IGGFCRVGEIEEALKIYKEMRHRGIKP-DLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   Y ++I  FC+A +   A+++ D++V    +         +  +YN ++  LC 
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL--------PDVVTYNTLLNGLCK 378

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +   AE    ++ ++GV  D   F  LI G+  EG  D A ++   M  + +  D   
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+   R+G+   A    D M      P    +  +++S  E G+V+ A   +  M+
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
            KG+  N+     I++     G+V +    +  MM +   P+   +++L+    ++ K  
Sbjct: 499 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 558

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A KLL+         D+ +Y  +++     G    A  I  K+  KG   D  +   +I
Sbjct: 559 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 618

Query: 629 AGLNQEGNTKQA 640
            G    GN+K+A
Sbjct: 619 NGHVTAGNSKEA 630



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 211/461 (45%), Gaps = 10/461 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  TH  M++   R G    A  ++  M  KG++     +  +++   + G+  ++ ++F
Sbjct: 190 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 249

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   GV   V+S+  L     R G    A + + +M   GI+P   +++ ++  F   
Sbjct: 250 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 309

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K++ A+ +  +M+  G+  D V Y  +I G+ R   M +A ++  EM      P V++Y
Sbjct: 310 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 369

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++ G     R  DA  + +EM+   V P+  T+T L+ G C  GK+ +  ++   M+ 
Sbjct: 370 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 429

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + + P D   +  L+   C+ G L+ A D+   M    I      Y ILI++ C+    +
Sbjct: 430 QRLRP-DIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 488

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            A   LD+++ K I+            +YN +I+  C +G   K + F +++M   V  D
Sbjct: 489 DAFGFLDEMINKGIL--------PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 540

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + +N LI G+ KE     AF+++ +M +  V  D   Y  LI  +   G   +A    +
Sbjct: 541 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 600

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
            M   G  P    + S++      G  + A ++   M+++G
Sbjct: 601 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 134/266 (50%), Gaps = 8/266 (3%)

Query: 44  RWVERAGLFNHDRE--------THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           R ++  GL N  RE        T   +I      GKL+ A  +   M  + ++ D   + 
Sbjct: 381 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 440

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI+   ++G + ++  ++D M    +  +  +Y  L      +G+   A  + ++M+++
Sbjct: 441 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 500

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           GI P   TYN ++ G+  S  +    +F + M    +S D++TYNT+I+GY +  KM +A
Sbjct: 501 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 560

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            KL   M+++ ++P V++Y  +I G+       +A  IF++M +  ++P+  TY +++ G
Sbjct: 561 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 620

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKD 301
              AG   E  ++  EM++R   P D
Sbjct: 621 HVTAGNSKEAFQLHDEMLQRGFAPDD 646



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 108/487 (22%), Positives = 191/487 (39%), Gaps = 56/487 (11%)

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
           N E    +   M+  Y      D    +  EM+   V P+ VT+  ++     AG     
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210

Query: 286 QKVLREMVERYIPP---KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
             ++  MV + + P     NSV   L    C+SG  + A +V K M    +  +   + I
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGL----CRSGMWDKAWEVFKEMDDFGVAPDVRSFTI 266

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEI-------------------------ILRPQSTLD 377
           LI  FC+    + A+K+  ++  + I                          LR      
Sbjct: 267 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326

Query: 378 M--EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
           +  +   Y  +I   C  G    A     +++  G L D V +N L+ G  KE     A 
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 386

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            ++  M  RGVP D   +  LI  Y  +G+   A    D+M+     P    + ++++ +
Sbjct: 387 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 446

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
              G +  A+ +   M  + +  N    + ++++   +G VE+A G +D M+  G +PN 
Sbjct: 447 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 506

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++S++      G      K L   +      DL +Y  ++   +   K  +A+ +L  
Sbjct: 507 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL-N 565

Query: 612 IMEKGGV-TDWKSSDKLIAGLNQEGNTKQADIL----------------SRMIRGEMSRG 654
           +MEK  V  D  + + LI G +  GN ++A  +                  MI G ++ G
Sbjct: 566 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 625

Query: 655 SQKEKKQ 661
           + KE  Q
Sbjct: 626 NSKEAFQ 632


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/528 (24%), Positives = 246/528 (46%), Gaps = 10/528 (1%)

Query: 27  YNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG 86
           YN +         L+  R +  A     +  T+  ++  L   G++  A  +L +MP++G
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 87  VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
                 M+ V++E+  + G  + +V++ + +   G    V + + +   I  +G    A 
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKAL 212

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                + S G EP   +YN +L G  ++ +        E+M       ++VT+NT+I+  
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R    +   ++ A+M E    P +  Y T+I G         A  I + M S+ +KPN 
Sbjct: 273 CRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNV 332

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           V Y  LL GLC A +  E +++L EM ++   P D+  F  L+   C++G ++   ++L+
Sbjct: 333 VCYNTLLKGLCSAERWEETEELLAEMFDKDC-PLDDVTFNILVDFFCQNGLVDRVIELLE 391

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+      +   Y  +I  FCK  + D A+ LL  +       +P +       SY  +
Sbjct: 392 QMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC--KPNTI------SYTIV 443

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           ++ LC   +   AE    Q++++G  L+P+ FN LI    K+G  + A E++K M   G 
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D  +Y  +I+   + G+  +A   L+ M+  G SP + ++ S+  +L  +GR+    +
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +  ++ +  ++ +  L   ++ +L  RG  E A+  +  M+ SG VPN
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/573 (24%), Positives = 255/573 (44%), Gaps = 19/573 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  ++  Y + G ++ + ++      + V  +  +Y  + + +  RGR   A    ++M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P    Y+V+L          +A+R  ED+ +RG +LDV   N ++N       +D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  L  ++     EP V+SY  ++KG    +R      + +EM      PN VT+  L+
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC  G    V +VL +M E    P D  ++  ++   CK GHL  A ++L  M    +
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTP-DIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  L++  C AE ++   +LL ++ +K+  L        +  ++N ++   C N
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL--------DDVTFNILVDFFCQN 380

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G   +      Q++  G + D + +  +I G  KEG  D A  ++K M   G   +  +Y
Sbjct: 381 GLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +++         DA+  +  MI+ G       F +++  L + G V+ A  ++K M+ 
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G   +L   + +++ L   G  +EAL  +++M+  G  PN   + S+ S LS +G+   
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
            +++ D         D   Y  V+ +L   G+T  A   L  ++  G V +  +   LI 
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIR 620

Query: 630 GLNQEGNTKQADILSRMIRGEMSRGSQKEKKQK 662
           GL  EG  K+A     M+    S+G+ ++   K
Sbjct: 621 GLASEGFVKEAQ---EMLTELCSKGALRKHLMK 650



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 127/297 (42%), Gaps = 47/297 (15%)

Query: 44  RWVER----AGLFNHDRE----THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           RW E     A +F+ D      T   +++   + G ++    +L  M   G   D   + 
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYT 406

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            +I  + K+G++ E+V +   M   G + +  SY  + K +    R++ A+   ++M+ +
Sbjct: 407 TVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 466

Query: 156 GIEPTRHTYNVMLWGFFLSLK--LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           G      T+N ++   FL  K  +E AI   + M   G S D+++Y+T+I+G  +  K D
Sbjct: 467 GCPLNPITFNTLI--NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK---------- 263
           EA +L   M  K + P  I Y+++        R +  +++FD ++   ++          
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 584

Query: 264 -------------------------PNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
                                    PN  TYT L+ GL   G + E Q++L E+  +
Sbjct: 585 SSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 641



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 78/168 (46%), Gaps = 1/168 (0%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + N L      E A++  + +   G  + D  ++  +I+ LG+ GK + A  +L  M 
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTDEALELLNVMV 534

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            KG+  +  ++  +  +  ++G + + +++FD ++   +      Y+A+   + +RG   
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
            A  +   M+S G  P   TY +++ G      ++ A     ++ S+G
Sbjct: 595 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 167/661 (25%), Positives = 294/661 (44%), Gaps = 53/661 (8%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEH--------------ALQFFRWVERAGLFNHDRETHLKM 62
           L PQ+  N  +N L  +    H              AL FF+W+     F H   ++  +
Sbjct: 50  LQPQWRKNPSFNTLIPSLTPTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHSYQPL 109

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDE----------DMFEVLIESYGKK-------G 105
           + IL R G L  A  +   M K  V   E            F + + SY +        G
Sbjct: 110 LFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFG 169

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
           ++ E   +F  M   GVE ++ S++ +     + G  ++AK YF  ++  G      TY 
Sbjct: 170 LIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYT 229

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
            ++ G+    +L  A + FE M   G   + V+Y  +I+G+    K+DEA +LF +MKE 
Sbjct: 230 SLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKED 289

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
              P V +YT ++  +  V +  +AL+ F+EM    ++PN  TYT L+   C  GKM E 
Sbjct: 290 GCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEG 349

Query: 286 QKVLREMVERYIPPKDNSV--FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
            ++L  M+E+ +    +SV  F  L+   CK G +  A  VL +M    +   +  Y  L
Sbjct: 350 MEMLSTMLEKGLV---SSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNEL 406

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I  FC+ +  DRA+ LL+K+ E +  L P         +YN +I  LC       A    
Sbjct: 407 ICGFCRKKSMDRAMALLNKMYENK--LSPNLV------TYNTLIHGLCKARVVDSAWRLH 458

Query: 404 RQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
             ++K G V D   F   I    K G  + A ++ + +  +    +   Y  LI+ Y + 
Sbjct: 459 HLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKA 518

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
            + +DA      M+ +G  P S  F  +++ L ++G+V+ A  ++  M +   K  +   
Sbjct: 519 EKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTY 578

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLG 579
             ++E +L     + A   +D M+ SG  PN   + + +     +G+ + A +++     
Sbjct: 579 TILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKE 638

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL-----NQE 634
              ++D   Y+ +++A    G+  +A+ +L ++ + G     ++   L+  L     N+E
Sbjct: 639 EGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKE 698

Query: 635 G 635
           G
Sbjct: 699 G 699



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 147/579 (25%), Positives = 259/579 (44%), Gaps = 32/579 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+    ++G +  A+     + K G   D   +  LI  Y K   + ++ K+F+IM Q G
Sbjct: 196 MVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEG 255

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
             R+  SY  L       G+   A   F +M  +G  P   TY V++  F    K   A+
Sbjct: 256 CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEAL 315

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +FFE+M   GI  +V TY  +I+ + +  KMDE  ++ + M EK +  +V+ +  +I GY
Sbjct: 316 KFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGY 375

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 +DA+ + D MK   V PN+ TY  L+ G C    M     +L +M E  + P +
Sbjct: 376 CKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSP-N 434

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK+  +++A  +   MI+     +   +   I+  CK    ++A ++ +
Sbjct: 435 LVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFE 494

Query: 362 KLVEKEIILRPQSTLDMEASS--YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
            L EK            EA+   Y  +I   C   +   A + F++++ +G   + + FN
Sbjct: 495 SLKEKH----------AEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFN 544

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L+ G  KEG  + A  +V +MG+         Y  LIE  LR+ +   A   LD MI  
Sbjct: 545 VLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISS 604

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P    + + +++    GR+  A  ++  + E+G+  +  +   ++ A    G ++ A
Sbjct: 605 GCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSA 664

Query: 539 LGRIDLMMQSGSVPN---FDSLLS--VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
            G +  M  +G  P+   +  LL   +  +  K    + L       +  +D A+  K+ 
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDL----NSTNISVDNANIWKIA 720

Query: 594 DALLAAGKTLNAYSILF-KIMEKGGVTDWKSSDKLIAGL 631
           D            ++LF K++E+G V +  +  KLI GL
Sbjct: 721 D--------FEIITMLFEKMVEQGCVPNVNTYSKLIKGL 751



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 146/624 (23%), Positives = 267/624 (42%), Gaps = 44/624 (7%)

Query: 28  NVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           N++HG       + AL+ F  ++  G F  D  T+  ++     VGK   A     +M +
Sbjct: 265 NLIHGFCEVGKIDEALELFFQMKEDGCFP-DVPTYTVLVAAFCEVGKETEALKFFEEMVE 323

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            G++ +   + VLI+ + K G + E +++   M + G+  SV  ++AL     +RG    
Sbjct: 324 NGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMED 383

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A    + M    + P   TYN ++ GF     ++ A+     M    +S ++VTYNT+I+
Sbjct: 384 AICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIH 443

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G  + + +D A +L   M +    P   ++   I     + + + A ++F+ +K    + 
Sbjct: 444 GLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEA 503

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N   YTAL+ G C A K  +   + + M+     P   +  + L G++ K G +  A  +
Sbjct: 504 NEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLR-KEGKVEDAMSL 562

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           +  M +         Y ILIE   +   +DRA   LD+++         S       +Y 
Sbjct: 563 VDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMI--------SSGCQPNVVTYT 614

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
             I+  C  G+  +AE    ++ ++G+L D   ++ L+  +   G  DSAF ++  M   
Sbjct: 615 AFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDT 674

Query: 444 GVPRDADAYICLI-----ESYLRKGEPADAKTA---------------------LDSMIE 477
           G       Y  L+     E Y ++G   D  +                       + M+E
Sbjct: 675 GCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVE 734

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G  P  + +  +++ L +   +  A R+   M E G+  + ++   +L +    G  EE
Sbjct: 735 QGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEE 794

Query: 538 ALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           AL  +D MM+   + + +S   L+  L E+G    A ++    L      D   ++ +LD
Sbjct: 795 ALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLD 854

Query: 595 ALLAAGKTLNAYSILFKIMEKGGV 618
            L+  G  ++  S L  IMEK G 
Sbjct: 855 GLVRKG-YVDECSQLRDIMEKTGC 877



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 77/380 (20%), Positives = 135/380 (35%), Gaps = 75/380 (19%)

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN    TAL     +  K +  Q      V  Y P         LL +  ++G L AA 
Sbjct: 78  NPNLHPLTAL-----NFFKWIHYQHGFIHTVHSYQP---------LLFILVRNGFLRAAE 123

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           +V  +MI+  + +    +                  +L+ L   E          +  +S
Sbjct: 124 NVRNSMIKSCVSSHEARF------------------VLNLLTHHE--------FSLSVTS 157

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIM 440
           YN +   L   G   +    F+ ++  GV +P  ++FN ++  H K GN   A      +
Sbjct: 158 YNRLFMVLSRFGLIDELNCLFKDMLNDGV-EPNLISFNTMVNAHCKIGNVVVAKAYFCGL 216

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            + G   D+  Y  LI  Y +  E  DA    + M ++G       + +++    E G++
Sbjct: 217 MKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKI 276

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
             A  +   M E G   +                                VP +  L++ 
Sbjct: 277 DEALELFFQMKEDGCFPD--------------------------------VPTYTVLVAA 304

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
             E GK   A+K  +  +      ++ +Y  ++D     GK      +L  ++EKG V+ 
Sbjct: 305 FCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSS 364

Query: 621 WKSSDKLIAGLNQEGNTKQA 640
               + LI G  + G  + A
Sbjct: 365 VVPFNALIDGYCKRGMMEDA 384


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/624 (23%), Positives = 280/624 (44%), Gaps = 15/624 (2%)

Query: 18  VPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           +PQ F    + + L    + +  L    W  +   F      + +++  LG+ G     R
Sbjct: 66  LPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMR 125

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ-LGVERSVKSYDALFKL 135
            +L +M   G +     F +LIESY K  +  E+V + DIM++  G++    +Y+ L  +
Sbjct: 126 RVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNV 185

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           ++   +  + +   ++M+S GI+P   T+N+++     + ++  AI   E+M S G+S D
Sbjct: 186 LVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPD 245

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
             T+ T++ G+     M+ A ++  +M       + ++   ++ GY    R ++ L   D
Sbjct: 246 EKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFID 305

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM +   +P+  T+ +L+ GLC  G +    ++L  M++    P D   +  L+   CK 
Sbjct: 306 EMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDP-DIFTYNSLIFGLCKL 364

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G +  A ++L  MI          Y  LI   CK    + A +L   L  K I+      
Sbjct: 365 GEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL------ 418

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
              +  ++N +IQ LC       A   F ++  KG   D   +N LI      G  + A 
Sbjct: 419 --PDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEAL 476

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            ++K M   G  R+   Y  LI+ + +     +A+   D M   G S     + ++++ L
Sbjct: 477 SLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGL 536

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            ++ RV+ A+++M  M+ +G+K +      +L      G +++A   +  M  +G  P+ 
Sbjct: 537 CKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDS 596

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             + +L+  LS+ G+   A +LL     +  ++   +Y  V+ AL    +T  A  +  +
Sbjct: 597 VTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFRE 656

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEG 635
           +MEKG   D  +   +  GL   G
Sbjct: 657 MMEKGDPPDAVTYKVVFRGLCSGG 680



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 212/440 (48%), Gaps = 16/440 (3%)

Query: 24  NLVYNVL-HGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           N+  NVL HG       E  L F   +   G F  DR T   ++  L R+G + HA  IL
Sbjct: 281 NVTVNVLVHGYCKEGRIEEVLSFIDEMSNEG-FRPDRFTFNSLVNGLCRIGHVKHALEIL 339

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             M ++G   D   +  LI    K G V+E+V+I + M       +  +Y+ L   + + 
Sbjct: 340 DVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKE 399

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
            +   A      + S+GI P   T+N ++ G  L+     A+  FE+MK++G   D  TY
Sbjct: 400 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTY 459

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N +I+      +++EA  L  EM+       V++Y T+I G+   +R ++A  IFDEM+ 
Sbjct: 460 NMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMEL 519

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             +  N VTY  L+ GLC   ++ E  +++ +M+   + P D   +  LL   C++G + 
Sbjct: 520 QGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKP-DKFTYNSLLTYFCRAGDIK 578

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            AAD+++ M       ++  YG LI    KA   + A +LL  +  K ++L PQ      
Sbjct: 579 KAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQ------ 632

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP-DSAFEIV 437
             +YNP+I+ L    +T +A   FR++M+KG   D V +  + RG    G P   A + +
Sbjct: 633 --TYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFL 690

Query: 438 KIMGRRGVPRDADAYICLIE 457
             M  +G   D  +++ L E
Sbjct: 691 VEMTDKGFLPDFSSFLMLAE 710



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 128/575 (22%), Positives = 260/575 (45%), Gaps = 14/575 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++ +L    KL     +   M  +G++ D   F +LI++  +   ++ ++ + 
Sbjct: 175 DAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMM 234

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M   G+    K++  L +  +  G    A R   +M++ G   +  T NV++ G+   
Sbjct: 235 EEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKE 294

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            ++E  + F ++M + G   D  T+N+++NG  R   +  A ++   M ++  +P + +Y
Sbjct: 295 GRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTY 354

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            ++I G   +   ++A+ I ++M   D  PN VTY  L+  LC   ++ E  ++ R +  
Sbjct: 355 NSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTS 414

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + I P D   F  L+   C + +   A ++ + M       +   Y +LI++ C     +
Sbjct: 415 KGILP-DVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLE 473

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A+ LL ++          S       +YN +I   C N +  +AE  F ++  +G+  +
Sbjct: 474 EALSLLKEM--------ESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRN 525

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +N LI G  K    + A +++  M   G+  D   Y  L+  + R G+   A   + 
Sbjct: 526 VVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQ 585

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           +M  +G  P S  + +++  L + GRV+ ASR+++++  KG+         +++AL    
Sbjct: 586 TMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREK 645

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA-AVKLLDFCLGRDCIIDLASY 589
              EA+     MM+ G  P+   +  +   L   G  I  AV  L     +  + D +S+
Sbjct: 646 RTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSF 705

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
             + + L A         ++ ++M++   +D + S
Sbjct: 706 LMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEVS 740



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 142/338 (42%), Gaps = 46/338 (13%)

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G   +   VL+ M         G + ILIE++ K E++D A+ ++D       I+  +
Sbjct: 117 KDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVD-------IMEEE 169

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSA 433
             L ++A +YN ++  L                                    +GN    
Sbjct: 170 FGLKLDAFTYNFLLNVLV-----------------------------------DGNKLKL 194

Query: 434 FEIVKI-MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
            EIV   M  RG+  D   +  LI++  R  +   A   ++ M   G SP    F ++M+
Sbjct: 195 VEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQ 254

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
              E+G +  A R+ + MV  G   +   V  ++      G +EE L  ID M   G  P
Sbjct: 255 GFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRP 314

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +   F+SL++ L   G    A+++LD  L      D+ +Y  ++  L   G+   A  IL
Sbjct: 315 DRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEIL 374

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            +++ +    +  + + LI+ L +E   ++A  L+R++
Sbjct: 375 NQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL 412


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/627 (23%), Positives = 274/627 (43%), Gaps = 14/627 (2%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           +  L P F    +   L    +   AL+ F W  +   F      + +++  LG+ G   
Sbjct: 55  VHHLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFE 114

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK-QLGVERSVKSYDAL 132
           + R +L +M   G ++D  +F + +ESYGK  +  E V I  +M+ +  ++   + Y+ L
Sbjct: 115 YMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVL 174

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
             +++   +  + +   + M+   I     T+N+++     + ++  AI   E+M S G+
Sbjct: 175 LNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGL 234

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
           S D  T+ T++ GY     +D A ++  +M E     T ++   +I G+    R D AL 
Sbjct: 235 SPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS 294

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
              E  S   +P+  TY  L+ GLC  G      +V+  M+   + P D   +  L+   
Sbjct: 295 FIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDP-DIYTYNSLISGL 353

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           CK G +  A  +L  M+       A  Y  +I + CK    D A ++   L  K I+   
Sbjct: 354 CKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGIL--- 410

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
                 +  ++N +IQ LC +     A   F ++  KG   D   +N LI         +
Sbjct: 411 -----PDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLE 465

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A  ++K M   G  R+   Y  LI+ + +     +A+   D M   G S  S  + +++
Sbjct: 466 EALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLI 525

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           + L +  RV+ A+++M  M+ +G++ +      +L      G +++A   +  M  SG  
Sbjct: 526 DGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCN 585

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P+   + +L+S L + G+   A +LL     +  ++   +Y  V+ AL    +T  A  +
Sbjct: 586 PDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRL 645

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             ++++K    D  +   +  GL   G
Sbjct: 646 FREMLDKSEPPDAITYKIVYRGLCNGG 672



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 207/436 (47%), Gaps = 12/436 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N++ N        + AL F +     G F  D+ T+  ++  L ++G   HA  ++  M 
Sbjct: 277 NVLINGFCKQGRIDQALSFIQEAVSEG-FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML 335

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
             G+  D   +  LI    K G ++E+VKI D M       +  +Y+A+   + +  R  
Sbjct: 336 LGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVD 395

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A      + S+GI P   T+N ++ G  LS   ++A+  FE+MK +G   D  TYN +I
Sbjct: 396 EATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLI 455

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +     +K++EA  L  EM+       V+ Y T+I G+   +R ++A  IFDEM+   V 
Sbjct: 456 DSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVS 515

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            ++VTY  L+ GLC + ++ +  +++ +M+   + P D   +  LL   CK+G +  AAD
Sbjct: 516 RDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP-DKFTYNSLLTHFCKTGDIKKAAD 574

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +++ M       +   Y  LI   CKA     A +LL  +  K ++L P         +Y
Sbjct: 575 IVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPH--------AY 626

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP-DSAFEIVKIMG 441
           NP+IQ L    +T +A   FR+++ K    D + +  + RG    G P   A +    M 
Sbjct: 627 NPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMI 686

Query: 442 RRGVPRDADAYICLIE 457
            RG   +  +++ L E
Sbjct: 687 ERGNIPEFSSFVMLAE 702



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 258/565 (45%), Gaps = 29/565 (5%)

Query: 23  HNLVYNVLHGAK-----NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           +N++ NVL  A       S H+    R +       HD  T   +I+ L +  ++  A  
Sbjct: 171 YNVLLNVLVDANKLKLVESAHSSMVRRRIR------HDVSTFNILIKALCKAHQVRPAIL 224

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           ++ +MP  G+  DE  F  +++ Y + G +  +++I + M + G   +  + + L     
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           ++GR   A  +  + +SEG  P + TYN ++ G       + A+   + M   G+  D+ 
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN++I+G  +  +++EA K+  +M  ++  P  ++Y  +I       R D+A  I   +
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  + P+  T+ +L+ GLC +        +  EM  +   P D   +  L+   C S  
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRP-DEFTYNMLIDSLCSSRK 463

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           L  A ++LK M           Y  LI+ FCK +  + A ++ D++ E + + R      
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM-ELQGVSR------ 516

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
            ++ +YN +I  LC + +   A     Q++ +G+  D   +N+L+    K G+   A +I
Sbjct: 517 -DSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADI 575

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           V+ M   G   D   Y  LI    + G    A   L S+   G       +  V+++LF+
Sbjct: 576 VQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFK 635

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR--GHVEEALGRIDLMMQSGSVPNF 554
             R   A R+ + M++K    +  +  KI+   L    G + EA+     M++ G++P F
Sbjct: 636 RNRTHEAMRLFREMLDKSEPPDA-ITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEF 694

Query: 555 DSLLSVLSEKGKTIAA----VKLLD 575
            S + +L+E   T++     VKL+D
Sbjct: 695 SSFV-MLAEGLCTLSMDDTLVKLVD 718



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 7/347 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L      + A +  R +   G+   D  T   +I+ L        A  +  +M
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGIL-PDVCTFNSLIQGLCLSSNHKSAMDLFEEM 439

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG + DE  + +LI+S      ++E++ +   M+  G  R+V  Y+ L     +  R 
Sbjct: 440 KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRI 499

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F++M  +G+     TYN ++ G   S ++E A +  + M   G+  D  TYN++
Sbjct: 500 EEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSL 559

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD--EMKSF 260
           +  + +   + +A  +   M      P +++Y T+I G     R   A R+    +MK  
Sbjct: 560 LTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGM 619

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+A  Y  ++  L    +  E  ++ REM+++  PP   +  +   G+    G +  
Sbjct: 620 VLTPHA--YNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGE 677

Query: 321 AADVLKAMI-RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
           A D    MI R +IP E   + +L E  C   M D  +KL+D ++EK
Sbjct: 678 AVDFTVEMIERGNIP-EFSSFVMLAEGLCTLSMDDTLVKLVDMIMEK 723



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 162/362 (44%), Gaps = 13/362 (3%)

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
           ++P   +SV+ ++L    K+G       VL+ M       + G + I +E++ K E+YD 
Sbjct: 93  FVP--SSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDE 150

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
            + ++ K++E E  ++P +        YN ++  L    +    E     ++++ +   V
Sbjct: 151 VVGIV-KVMEDEYRIKPDTRF------YNVLLNVLVDANKLKLVESAHSSMVRRRIRHDV 203

Query: 416 A-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           + FN LI+   K      A  +++ M   G+  D   +  +++ Y+  G    A    + 
Sbjct: 204 STFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQ 263

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+E G          ++    + GR+  A   ++  V +G + +      ++  L   GH
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
            + A+  +D M+  G  P+   ++SL+S L + G+   AVK+LD  + RDC  +  +Y  
Sbjct: 324 AKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNA 383

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEM 651
           ++ +L    +   A  I   +  KG + D  + + LI GL    N K A  L   ++G+ 
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG 443

Query: 652 SR 653
            R
Sbjct: 444 CR 445


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 160/659 (24%), Positives = 288/659 (43%), Gaps = 36/659 (5%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           H  +   L  A     A+  FR  E +     D  T+  MI  L +  +L+ A  +L +M
Sbjct: 13  HKSILRGLCDAGQCSDAVLHFR--EMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 70

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G   +   +  ++  + K   V+ ++ + + M   G    V SY  +   + +  + 
Sbjct: 71  VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R  +KM+  G +P   TY  ++ GF     L+ A+     M  RG   + +TYN +
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190

Query: 203 INGYNRFKKMDEAEKLFAEMKEK-NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++G    +K+D A +LF EM+E  +  P V +Y+T++   V   + DDA R+ + M S  
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             PN VTY++LL GLC AGK+ E   +L+ M      P +   +  ++   CK G ++ A
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP-NIVTYNTIIDGHCKLGRIDEA 309

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII---LRPQSTLDM 378
             +L+ M+          Y +L++ FCK    + AI L++ +VEK  +       S LDM
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369

Query: 379 ------------------------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLD 413
                                      SYN +I  LC   +  +  +   Q++    V D
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 429

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V FN +I    K    D A+E+  ++   G   +   Y  L+    +      A+  L 
Sbjct: 430 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 489

Query: 474 SMI-EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
            M  + G SP    + +V++ L +  RV  A ++   M+  G+  +    + ++ +L   
Sbjct: 490 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 549

Query: 533 GHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
             ++EA   ++LM+++G  P    + +L+    + G    A+++L   L +    D+ ++
Sbjct: 550 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 609

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
              +D L   G+   A  +L  ++  G V D  + + L+ G      T+ A  L  ++R
Sbjct: 610 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMR 668



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 256/555 (46%), Gaps = 14/555 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M +KG++    + + ++      G   ++V  F  M +     SV +Y+ +   + +  R
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSV-TYNTMINGLSKSDR 59

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A R   +M+  G  P   +YN +L GF  + ++E A+   E M  RG   DVV+Y T
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +ING  +  ++DEA ++  +M ++  +P VI+Y T++ G+  V   D A+ +  +M    
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +PNA+TY  ++ GLC   K+    ++ +EM E    P D   +  ++    KSG ++ A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +++AM+          Y  L+   CKA   D A  LL ++         +S       
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT--------RSGCSPNIV 291

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +I   C  G+  +A     +++  G   + V +  L+    K G  + A  +V++M
Sbjct: 292 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 351

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G   +   Y  L++ + +K E   A   L SMI+ G  P    + +V+  L +  +V
Sbjct: 352 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 411

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
                +++ M+      ++     I++A+     V+ A    +L+ +SG  PN   ++SL
Sbjct: 412 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471

Query: 558 LSVLSEKGKTIAAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           +  L +  +   A  LL +    + C  D+ +Y  V+D L  + +   AY +  +++  G
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 531

Query: 617 GVTDWKSSDKLIAGL 631
              D  +   +I+ L
Sbjct: 532 LAPDDVTYSIVISSL 546



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 142/620 (22%), Positives = 268/620 (43%), Gaps = 78/620 (12%)

Query: 9   RLQNKIRALVPQFDHNLVYNV------LHG---AKNSEHALQFFRWVERAGLFNHDRETH 59
           RL + IR L    D+    NV      LHG   A   E+AL     +   G    D  ++
Sbjct: 59  RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGC-PPDVVSY 117

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             +I  L ++ +++ A  ++  M ++G Q +   +  L++ + + G +  +V++   M +
Sbjct: 118 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 177

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLE 178
            G   +  +Y+ +   +    +   A + F +M   G   P   TY+ ++     S K++
Sbjct: 178 RGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 237

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A R  E M S+G S +VVTY+++++G  +  K+DEA  L   M      P +++Y T+I
Sbjct: 238 DACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 297

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YI 297
            G+  + R D+A  + +EM     +PN VTYT LL   C  GK  +   ++  MVE+ Y+
Sbjct: 298 DGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 357

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           P  +   +  LL + CK   +  A  +L +MI+         Y  +I   CKA      +
Sbjct: 358 P--NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415

Query: 358 KLLDKLVEKEII---------------------------LRPQSTLDMEASSYNPMIQHL 390
            LL++++    +                           L  +S       +YN ++  L
Sbjct: 416 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 475

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           C + +  +AE   R++ +K    P  + +N +I G  K    D A+++   M   G+  D
Sbjct: 476 CKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 535

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  +I S  +     +A   L+ M+++G  P +  + ++++   + G +  A  +++
Sbjct: 536 DVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 595

Query: 509 SMVEKGVKEN-------LDLVAK---------ILEALLMRGHV----------------- 535
            ++ KG   +       +D ++K         +LE +L  G V                 
Sbjct: 596 LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDAS 655

Query: 536 --EEALGRIDLMMQSGSVPN 553
             E+A+   ++M Q G  P+
Sbjct: 656 RTEDAVDLFEVMRQCGCEPD 675



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 216/470 (45%), Gaps = 10/470 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L + GKL+ A  +L  M + G   +   +  +I+ + K G + E+  + + M
Sbjct: 257 TYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 316

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G + +V +Y  L     + G+   A      M+ +G  P   TYN +L  F    ++
Sbjct: 317 VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEV 376

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A +    M  +G   +VV+YNT+I G  +  K+ E   L  +M   N  P ++++ T+
Sbjct: 377 ERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTI 436

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I       R D A  +F+ ++     PN VTY +L+ GLC + +  + + +LREM  +  
Sbjct: 437 IDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG 496

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D   +  ++   CKS  ++ A  +   M+   +  +   Y I+I + CK    D A 
Sbjct: 497 CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEAN 556

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            +L      E++L+  +  D  A +Y  +I   C  G   KA    + L+ KG   D V 
Sbjct: 557 NVL------ELMLK--NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 608

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           F+  I   SK G    A E+++ M R G+  D   Y  L++ +       DA    + M 
Sbjct: 609 FSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMR 668

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQT-ASRVMKSMVEKGVKENLDLVAKI 525
           + G  P ++ + +++  L +    +   + V KSMV+ G K N +L +K+
Sbjct: 669 QCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKL 718



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 5/220 (2%)

Query: 24  NLV-YNVL-HGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           NLV YN L HG   S   + A    R + R    + D  T+  +I+ L +  +++ A  +
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 523

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
            L M   G+  D+  + ++I S  K   + E+  + ++M + G +    +Y  L     +
Sbjct: 524 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G    A      +LS+G  P   T+++ +       +L  A    E M   G+  D VT
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 643

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           YNT++ G+    + ++A  LF  M++   EP   +YTT++
Sbjct: 644 YNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 161/632 (25%), Positives = 294/632 (46%), Gaps = 18/632 (2%)

Query: 25  LVYNVL-HG-AKNSE--HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           +VYNVL HG  KN     A++    + + GL      T+  ++  L +V +      ++ 
Sbjct: 262 VVYNVLIHGLCKNKRVWEAVEIKNGLIQKGL-TASEVTYCTLVLGLCKVQEFEVGAGVMD 320

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M + G    E     L+E   +KG V ++  + + +K++G   S+  Y+AL   + + G
Sbjct: 321 EMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDG 380

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           ++  A+  F +M  +G+     TY++++  F    KL+TAI F   M   GI + V  YN
Sbjct: 381 KFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYN 440

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++ING+ +   +  A   F EM +K ++PTV+SYT++I GY    +  +A R++ EM   
Sbjct: 441 SLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGK 500

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + PN  T+T L+  L  A +M +  ++  EM+E+ + P + +  + + G  CK G+   
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG-HCKEGNTVK 559

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A ++L  M++  +  +   Y  LI + C       A K +D L  +   L          
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEM------- 612

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
             Y+ ++   C  G+   A    R+++K+GV +D V +  LI G  KE +  + F ++K 
Sbjct: 613 -CYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKN 671

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  + +  D   Y  +I+ Y + G    A    D MI++G +P    + +++  L + G 
Sbjct: 672 MHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGL 731

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS--GSVPNFDSL 557
           +  A  + K M+      N       L+ L   G +E+A+   + M++    +  +++ L
Sbjct: 732 MDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNIL 791

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +    + G+   A KLLD  +      D  +Y  ++      G    A      ++ KG 
Sbjct: 792 VRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGL 851

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
             D  + + LI G    G   +A ++   MIR
Sbjct: 852 KPDTLAYNFLIYGCCIAGELGKAFELRDDMIR 883



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/559 (24%), Positives = 250/559 (44%), Gaps = 14/559 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++E L R GK+  A  ++  + K G      ++  LI S  K G   E+  +F  M + G
Sbjct: 337 LVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKG 396

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +  +Y  L     RRG+   A  +  KM+  GI+ T + YN ++ G      L  A+
Sbjct: 397 LCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAV 456

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            FF++M  +G+   VV+Y ++I+GY    K+ EA +L+ EM  K I P   ++TT+I   
Sbjct: 457 SFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISAL 516

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R  DA R+FDEM   ++ PN VTY  ++ G C  G  V+  ++L +MV++ + P D
Sbjct: 517 FRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP-D 575

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   C +G +  A   +  + R         Y  L+  +CK      A+ +  
Sbjct: 576 TYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCR 635

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           ++V++ +        DM+   Y  +I        T       + +  + +  D V + ++
Sbjct: 636 EMVKRGV--------DMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSM 687

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G+SK G+   AF I  IM   G   +   Y  LI    + G    A+     M+    
Sbjct: 688 IDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNS 747

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           +P    +   ++ L  +G ++ A ++   M+ KG+  N      ++      G VEEA  
Sbjct: 748 TPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATK 806

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            +D M+ +   P+   + +++     +G    A++  D  L +    D  +Y  ++    
Sbjct: 807 LLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCC 866

Query: 598 AAGKTLNAYSILFKIMEKG 616
            AG+   A+ +   ++ +G
Sbjct: 867 IAGELGKAFELRDDMIRRG 885



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/522 (22%), Positives = 240/522 (45%), Gaps = 34/522 (6%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + GK + A  +  +M +KG+  ++  + +LI+S+ ++G +  ++     M   G
Sbjct: 372 LINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAG 431

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +V  Y++L     + G    A  +F++M+ +G++PT  +Y  ++ G+    KL  A 
Sbjct: 432 IKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAF 491

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R + +M  +GI+ +  T+ T+I+   R  +M +A +LF EM E+N+ P  ++Y  MI+G+
Sbjct: 492 RLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGH 551

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                   A  + ++M    + P+  TY  L+  LC  G++ E +K + ++   +    +
Sbjct: 552 CKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNE 611

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  LL   CK G L  A  V + M++  +  +   Y +LI+   K +       LL 
Sbjct: 612 -MCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLK 670

Query: 362 KLVEKEIILRPQ-----STLDMEAS------------------------SYNPMIQHLCH 392
            + ++   LRP      S +D  +                         +Y  +I  LC 
Sbjct: 671 NMHDQR--LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCK 728

Query: 393 NGQTGKAEIFFRQ-LMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G   KAE+ +++ L+     + V +   +   ++EG+ + A ++   M  +G+  +  +
Sbjct: 729 AGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVS 787

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  L+  + + G   +A   LD MI++   P    + +++      G +  A     +M+
Sbjct: 788 YNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTML 847

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            KG+K +      ++    + G + +A    D M++ G  PN
Sbjct: 848 NKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPN 889



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 146/625 (23%), Positives = 269/625 (43%), Gaps = 35/625 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+FF ++     FNH   +   +I  L        A  +L  +  +G     ++FE L+
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147

Query: 99  ESYGK-------------KGIVQE-----SVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           + + K             +  VQE     SV IF +M+Q  +   V++   +   + +  
Sbjct: 148 DCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIR 207

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R  M    F ++LS GI P  + Y  ++  F        A    + M+S    L+VV YN
Sbjct: 208 RVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESS--DLNVVVYN 265

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G  + K++ EA ++   + +K +  + ++Y T++ G   V+  +    + DEM   
Sbjct: 266 VLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIEL 325

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P     ++L+ GL   GK+V+   ++   V++        V+  L+   CK G  + 
Sbjct: 326 GFVPTEAALSSLVEGLRRKGKVVDAFDLVNR-VKKVGAMPSLFVYNALINSLCKDGKFDE 384

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  + K M    +      Y ILI++FC+    D AI  L K++         + + +  
Sbjct: 385 AELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI--------MAGIKITV 436

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVK 438
             YN +I   C  G    A  FF +++ KG L P  V++ +LI G+  +G    AF +  
Sbjct: 437 YPYNSLINGHCKLGNLSAAVSFFDEMIDKG-LKPTVVSYTSLISGYCNKGKLHEAFRLYH 495

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  +G+  +   +  LI +  R     DA    D M+E    P    +  ++E   ++G
Sbjct: 496 EMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEG 555

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
               A  ++  MV+KG+  +      ++ +L   G V EA   ID + +     N   + 
Sbjct: 556 NTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYS 615

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +LL    ++G+   A+ +    + R   +DL  Y  ++D  +    T   + +L  + ++
Sbjct: 616 ALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQ 675

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQA 640
               D      +I G ++ G+ K+A
Sbjct: 676 RLRPDKVIYTSMIDGYSKAGSVKKA 700



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 182/394 (46%), Gaps = 12/394 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  L R  ++  A  +  +M ++ +  +E  + V+IE + K+G   ++ ++ + M
Sbjct: 508 TFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQM 567

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            Q G+     +Y  L   +   GR   AK++ + +  E  +     Y+ +L G+    +L
Sbjct: 568 VQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRL 627

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+    +M  RG+ +D+V Y  +I+G  + +       L   M ++ + P  + YT+M
Sbjct: 628 RDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSM 687

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY        A  I+D M      PN VTYT L+  LC AG M + + + +EM+    
Sbjct: 688 IDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNS 747

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P ++  +   L    + G +  A  +   M++  +      Y IL+  FCK    + A 
Sbjct: 748 TP-NHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEAT 805

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           KLLD++++  I   P      +  +Y+ +I   C  G    A  F+  ++ KG+  D +A
Sbjct: 806 KLLDEMIDNAIF--P------DCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLA 857

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGV-PRDA 449
           +N LI G    G    AFE+   M RRGV P  A
Sbjct: 858 YNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQA 891



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/480 (22%), Positives = 203/480 (42%), Gaps = 13/480 (2%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           +V  Y+ L   + +  R   A    N ++ +G+  +  TY  ++ G     + E      
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVM 319

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           ++M   G        ++++ G  R  K+ +A  L   +K+    P++  Y  +I      
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            + D+A  +F EM    +  N VTY+ L+   C  GK+      L +M+   I       
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYP- 438

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+   CK G+L+AA      MI   +      Y  LI  +C       A +L  ++ 
Sbjct: 439 YNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT 498

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
            K I   P +       ++  +I  L    +   A   F +++++ ++ + V +N +I G
Sbjct: 499 GKGI--APNT------YTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
           H KEGN   AFE++  M ++G+  D   Y  LI S    G   +AK  +D +  +     
Sbjct: 551 HCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLN 610

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + +++    ++GR++ A  V + MV++GV  +L   A +++  +         G + 
Sbjct: 611 EMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLK 670

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M      P+   + S++   S+ G    A  + D  +   C  ++ +Y  +++ L  AG
Sbjct: 671 NMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAG 730



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 36/233 (15%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L +M  + ++ D+ ++  +I+ Y K G V+++  I+DIM   G   ++ +Y  L   + 
Sbjct: 668 LLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELC 727

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G    A+  + +ML     P   TY   L        +E A++   DM  +G+  + V
Sbjct: 728 KAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTV 786

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           +YN ++ G+ +  +++EA KL  EM +  I P  I+Y+T+I         D A+  +D M
Sbjct: 787 SYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTM 846

Query: 258 --------------------------KSFD---------VKPNAVTYTALLPG 275
                                     K+F+         VKPN  T+ +L  G
Sbjct: 847 LNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 1/151 (0%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+   ++ L R G +  A  +  DM  KG+  +   + +L+  + K G V+E+ K+ D M
Sbjct: 753 TYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEM 811

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
               +     +Y  +     RRG    A  +++ ML++G++P    YN +++G  ++ +L
Sbjct: 812 IDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGEL 871

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
             A    +DM  RG+  +  T+ ++ +G +R
Sbjct: 872 GKAFELRDDMIRRGVKPNQATHKSLSHGASR 902


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 153/630 (24%), Positives = 291/630 (46%), Gaps = 16/630 (2%)

Query: 15  RALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + L P +F ++LV   +    + + A++  R +   GL   +  T+  +   L R  ++N
Sbjct: 257 KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLV-PNTYTYTIITAGLCRAKRMN 315

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A+    +M K G++ D +    LI+ + ++G + E ++I D+M   G+  ++ +Y+ L 
Sbjct: 316 EAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 375

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G+   A      M++ G +P   T+ +++ G+     +  A+   ++M+ R + 
Sbjct: 376 HGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 435

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
              V+Y  MING    K +  A KL  +M    ++P V+ Y+ +I  Y +  R ++A R+
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL 495

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
            D M    V P+   Y A++  L  AGKM E    L E+  R + P   +    +LG   
Sbjct: 496 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYS- 554

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K+G +  AA     M+   +      Y +LI    KA     A+ +  +L    ++   Q
Sbjct: 555 KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQ 614

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
           +         +  I  L  NG+  +A   F +L +KG++ D   +++LI G  K+G  + 
Sbjct: 615 TC--------SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 666

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           AFE+   M  +G+  +   Y  L++   + G+   A+   D M E G  P S  + ++++
Sbjct: 667 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 726

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--S 550
              +   V  A  +   M  KGV+ +  +   ++      G +E+A+     M+Q G  +
Sbjct: 727 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT 786

Query: 551 VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
             +F++L+    +  K   A +L    + +  + D  +Y  V+D    AGK   A ++LF
Sbjct: 787 TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA-NLLF 845

Query: 611 KIM-EKGGVTDWKSSDKLIAGLNQEGNTKQ 639
           K M E+  + D  +   L+ G N+ G + +
Sbjct: 846 KEMQERNLIVDTVTYTSLMYGYNKLGQSSE 875



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 239/496 (48%), Gaps = 12/496 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N + + L  A   E A  +   ++  GL   D  T    I    + GK+  A     
Sbjct: 509 FCYNAIISCLSKAGKMEEASTYLLEIQGRGL-KPDAVTFGAFILGYSKTGKMTEAAKYFD 567

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G+  +  ++ VLI  + K G + E++ IF  +  LGV   V++  A    +L+ G
Sbjct: 568 EMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNG 627

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A + F+++  +G+ P   TY+ ++ GF    ++E A    ++M  +GI+ ++  YN
Sbjct: 628 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 687

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +++G  +   +  A KLF  M EK +EP  ++Y+TMI GY   E   +A  +F EM S 
Sbjct: 688 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 747

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V+P++  Y AL+ G C  G M +   + REM+++      +  F  L+   CKS  +  
Sbjct: 748 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS--FNTLIDGYCKSCKIQE 805

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A+ + + MI   I  +   Y  +I+  CKA   + A  L  ++ E+ +I+        + 
Sbjct: 806 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV--------DT 857

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y  ++      GQ+ +    F +++ KGV  D V +  +I  H KE N   AF++   
Sbjct: 858 VTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 917

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +  +G+      +  LI +  ++ +  +A   LD M E G  P+ +   +++ S  E G+
Sbjct: 918 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGK 977

Query: 500 VQTASRVMKSMVEKGV 515
           +  A+RV + +   G+
Sbjct: 978 MDEATRVFEGVKSLGL 993



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 146/590 (24%), Positives = 269/590 (45%), Gaps = 54/590 (9%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++LI+SY + G++ E+  +F + K   +  S+   ++L K +L+ G   +  + +N M
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGM 219

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L   +    +TY  ++     +  L  A R   +M  +G++ +   Y+ +I G  +   +
Sbjct: 220 LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDI 279

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           DEA +L   M EK + P   +YT +  G    +R ++A   F+EM+   +KP+    +AL
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSAL 339

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G    G + EV ++   MV   IP    +  + + G+ CK G +  AA++LK M+ L 
Sbjct: 340 IDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGL-CKFGKMEKAAEILKGMVTLG 398

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
               +  + +LIE +C+     RA++LLD++ ++ ++  P       A SY  MI  LCH
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV--PS------AVSYGAMINGLCH 450

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGN-----------------PD-- 431
                 A     ++   G L P  V ++ LI  ++ EG                  PD  
Sbjct: 451 CKDLSLANKLLEKMTFSG-LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIF 509

Query: 432 -----------------SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
                            ++  +++I G RG+  DA  +   I  Y + G+  +A    D 
Sbjct: 510 CYNAIISCLSKAGKMEEASTYLLEIQG-RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 568

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M++ G  P + L+  ++   F+ G +  A  + + +   GV  ++   +  +  LL  G 
Sbjct: 569 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGR 628

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD-FCLGRDCIIDLASYE 590
           V+EAL     + + G VP+   + SL+S   ++G+   A +L D  CL +    ++  Y 
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL-KGIAPNIFIYN 687

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            ++D L  +G    A  +   + EKG   D  +   +I G  +  N  +A
Sbjct: 688 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 737



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 136/590 (23%), Positives = 269/590 (45%), Gaps = 13/590 (2%)

Query: 62   MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
            MI  L     L+ A  +L  M   G++ +  ++ +LI +Y  +G ++E+ ++ D M   G
Sbjct: 444  MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503

Query: 122  VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            V   +  Y+A+   + + G+   A  Y  ++   G++P   T+   + G+  + K+  A 
Sbjct: 504  VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 563

Query: 182  RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            ++F++M   G+  +   Y  +ING+ +   + EA  +F  +    + P V + +  I G 
Sbjct: 564  KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGL 623

Query: 242  VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
            +   R  +AL++F E+K   + P+  TY++L+ G C  G++ +  ++  EM  + I P +
Sbjct: 624  LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP-N 682

Query: 302  NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              ++  L+   CKSG +  A  +   M    +  ++  Y  +I+ +CK+E    A  L  
Sbjct: 683  IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 742

Query: 362  KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
            ++  K +  +P S +      YN ++   C  G   KA   FR++++KG    ++FN LI
Sbjct: 743  EMPSKGV--QPHSFV------YNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLI 794

Query: 422  RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
             G+ K      A ++ + M  + +  D   Y  +I+ + + G+  +A      M E    
Sbjct: 795  DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 854

Query: 482  PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
              +  + S+M    + G+      + + MV KGVK +      ++ A     ++ EA   
Sbjct: 855  VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 914

Query: 542  IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
             D ++  G +      D L++ L ++     A KLLD          LA+   ++ +   
Sbjct: 915  RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHE 974

Query: 599  AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG-LNQEGNTKQADILSRMI 647
            AGK   A  +   +   G V D  +   L+ G LN   +    +++ +++
Sbjct: 975  AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 118/553 (21%), Positives = 233/553 (42%), Gaps = 50/553 (9%)

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           Q+GV + + S+  L   +     + +A     +M+      +    +V+ W         
Sbjct: 99  QMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFW--------- 149

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
                    ++ G S  VV ++ +I+ Y R   +DEA  +F   K  +I  ++I   +++
Sbjct: 150 --------FRNYGGSSPVV-FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLL 200

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           K  +     +   ++++ M    +  +  TYT L+  LC  G +   ++VL EM E+ + 
Sbjct: 201 KDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLN 260

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA-------- 350
           P +  ++  ++   C+ G ++ A ++ ++M    +      Y I+    C+A        
Sbjct: 261 PNE-FIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKL 319

Query: 351 ---EM--------YDRAIKLLDKLV-EKEI--ILRPQSTL-----DMEASSYNPMIQHLC 391
              EM        Y+    L+D  + E +I  +LR +  +      +   +YN +I  LC
Sbjct: 320 TFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC 379

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G+  KA    + ++  G   +   F  LI G+ +E N   A E++  M +R +   A 
Sbjct: 380 KFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAV 439

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           +Y  +I       + + A   L+ M   G  P   ++  ++ +   +GR++ A R++  M
Sbjct: 440 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM 499

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
              GV  ++     I+  L   G +EEA   +  +   G  P+   F + +   S+ GK 
Sbjct: 500 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 559

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A K  D  L    + +   Y  +++    AG  + A SI  ++   G + D ++    
Sbjct: 560 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF 619

Query: 628 IAGLNQEGNTKQA 640
           I GL + G  ++A
Sbjct: 620 IHGLLKNGRVQEA 632



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 133/280 (47%), Gaps = 16/280 (5%)

Query: 23   HNLVYNVL-HGA---KNSEHALQFFRWVERAGL-----FNHDRETHLKMIEILGRVGKLN 73
            H+ VYN L HG     + E A+  FR + + G      FN        +I+   +  K+ 
Sbjct: 752  HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-------TLIDGYCKSCKIQ 804

Query: 74   HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
             A  +  +M  K +  D   +  +I+ + K G ++E+  +F  M++  +     +Y +L 
Sbjct: 805  EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864

Query: 134  KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
                + G+       F KM+++G++P   TY ++++       L  A +  +++  +G+ 
Sbjct: 865  YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924

Query: 194  LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
                 ++ +I    + + + EA KL  EM E  ++P++ +  T+++ +    + D+A R+
Sbjct: 925  TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984

Query: 254  FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
            F+ +KS  + P+  T   L+ G  +     + + +++++V
Sbjct: 985  FEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 247/518 (47%), Gaps = 13/518 (2%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K++  + ++ K +    +   M   G+  +   + +LI  + ++  +  ++ +   M +L
Sbjct: 86  KLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL 145

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G E ++ +  +L        R   A    ++M   G +P   T+N ++ G FL  K   A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +   + M ++G   D+VTY  ++NG  +    D A  L  +M++  +EP V+ YTT+I G
Sbjct: 206 VALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDG 265

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +  DDAL +F EM++  ++PN VTY++L+  LC+ G+  +  ++L +M+ER I P 
Sbjct: 266 LCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP- 324

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  L+    K G L  A  +   M++ SI      Y  LI  FC  +  D A ++ 
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + +V K     P      +  SY+ +I+  C   +  +    FR++ ++G++ + V +  
Sbjct: 385 EFMVSKHCF--P------DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI+G  + G+ D A EI K M   GVP +   Y  L++   + G+   A    + +    
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  ++E + + G+V+    +  ++  KGVK ++     ++     +G  EEA 
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
                M + G++PN   +++L+      G   A+ +L+
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 217/442 (49%), Gaps = 13/442 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + L++ +    K SE      R V +      D  T+  ++  L + G  + A  +L  M
Sbjct: 190 NTLIHGLFLHNKASEAVALIDRMVAKGC--QPDLVTYGVVVNGLCKRGDTDLAFILLNKM 247

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            +  ++    ++  +I+   K   + +++ +F  M+  G+  +V +Y +L   +   GR+
Sbjct: 248 EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R  + M+   I P   T++ ++  F    KL  A + +++M  R I   +VTY+++
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING+    ++DEA+++F  M  K+  P V+SY+T+IKG+   +R D+ + +F EM    +
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGL 427

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             N VTYT L+ GL  AG     Q++ +EMV   +PP +   +  LL   CK+G L  A 
Sbjct: 428 VGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPP-NIMTYNTLLDGLCKNGKLEKAM 486

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V + + R  +      Y I+IE  CKA   +    L   L  K +  +P      +  +
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV--KP------DVVA 538

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN MI   C  G   +A+  F+++ + G L +   +N LIR   ++G+ +++ E++K M 
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598

Query: 442 RRGVPRDADAYICLIESYLRKG 463
             G   DA   I L+ + L  G
Sbjct: 599 SCGFAGDAST-IGLVTNMLHDG 619



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 221/490 (45%), Gaps = 31/490 (6%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           H+  T+  +I    R  +L  A  +L  M K G + +      L+  Y     + E+V +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
            D M   G + +  +++ L   +    +   A    ++M+++G +P   TY V++ G   
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
               + A      M+   +   V+ Y T+I+G  + K MD+A  LF EM+ K I P V++
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y+++I       R  DA R+  +M    + P+  T++AL+      GK+VE +K+  EMV
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +R I P   + +  L+   C    L+ A  + + M+      +   Y  LI+ FCKA+  
Sbjct: 354 KRSIDPSIVT-YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRV 412

Query: 354 DRAIKLLDKLVEKEII------------LRPQSTLDMEAS---------------SYNPM 386
           D  ++L  ++ ++ ++            L      DM                  +YN +
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +  LC NG+  KA + F + +++  ++P    +N +I G  K G  +  +++   +  +G
Sbjct: 473 LDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V  D  AY  +I  + RKG   +A      M EDG  P S  + +++ +   DG  + ++
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591

Query: 505 RVMKSMVEKG 514
            ++K M   G
Sbjct: 592 ELIKEMRSCG 601



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 121/551 (21%), Positives = 225/551 (40%), Gaps = 77/551 (13%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ +  K       + + + M+ LG+  +  +Y  L     RR +  +A     KM+
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G EP   T + +L G+  S ++  A+   + M   G   + VT+NT+I+G     K  
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  L   M  K  +P +++Y  ++ G       D A  + ++M+   ++P  + YT ++
Sbjct: 204 EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTII 263

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC    M +   + +EM  + I P +   +  L+   C  G  + A+ +L  MI   I
Sbjct: 264 DGLCKNKHMDDALNLFKEMETKGIRP-NVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   +  LI+ F K      A KL D++V++ I        D    +Y+ +I   C +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI--------DPSIVTYSSLINGFCMH 374

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A+  F  ++ K    D V+++ LI+G  K    D   E+ + M +RG+  +   Y
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI                                   + LF+ G    A  + K MV 
Sbjct: 435 TTLI-----------------------------------QGLFQAGDCDMAQEIFKEMVS 459

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
            GV  N+     +L+ L   G +E+A+   + + +S   P                    
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT------------------- 500

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
                        + +Y  +++ +  AGK  + + +   +  KG   D  + + +I+G  
Sbjct: 501 -------------IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547

Query: 633 QEGNTKQADIL 643
           ++G+ ++AD L
Sbjct: 548 RKGSKEEADAL 558



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 178/366 (48%), Gaps = 11/366 (3%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           K+ + AL  F+ +E  G+   +  T+  +I  L   G+ + A  +L DM ++ +  D   
Sbjct: 270 KHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI+++ K+G + E+ K++D M +  ++ S+ +Y +L        R   AK+ F  M+
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S+   P   +Y+ ++ GF  + +++  +  F +M  RG+  + VTY T+I G  +    D
Sbjct: 389 SKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCD 448

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A+++F EM    + P +++Y T++ G     + + A+ +F+ ++   ++P   TY  ++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G+C AGK+ +   +   +  + + P D   +  ++   C+ G    A  + K M     
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKP-DVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
              +G Y  LI    +A + D      D+    E+I   +S      +S   ++ ++ H+
Sbjct: 568 LPNSGCYNTLI----RARLRDG-----DREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618

Query: 394 GQTGKA 399
           G+  K+
Sbjct: 619 GRLDKS 624



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/510 (21%), Positives = 214/510 (41%), Gaps = 41/510 (8%)

Query: 175 LKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           LKL+ A+  F +M KSR     ++ ++ +++   +  K D    L  +M+   +     +
Sbjct: 60  LKLDDAVALFGEMVKSRPFP-SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM- 292
           Y+ +I  +    +   AL +  +M     +PN VT ++LL G C + ++ E   ++ +M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           V  Y P  +   F  L+         + A  ++  M+      +   YG+++   CK   
Sbjct: 179 VTGYQP--NTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            D A  LL+K+         Q  L+     Y  +I  LC N     A   F+++  KG+ 
Sbjct: 237 TDLAFILLNKM--------EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIR 288

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            + V +++LI      G    A  ++  M  R +  D   +  LI++++++G+  +A+  
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            D M++    P+   + S++       R+  A ++ + MV K    ++   + +++    
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCK 408

Query: 532 RGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
              V+E +     M Q G V N   + +L+  L + G    A ++    +      ++ +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 589 YEKVLDALLAAGK------------------TLNAYSILFKIMEKGGVTD--WKSSDKLI 628
           Y  +LD L   GK                  T+  Y+I+ + M K G  +  W     L 
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW----DLF 524

Query: 629 AGLNQEGNTKQADILSRMIRGEMSRGSQKE 658
             L+ +G        + MI G   +GS++E
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 254/519 (48%), Gaps = 20/519 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI    ++G++  A  IL +M   GV+ D   +  L++ Y KKG++ ++ + ++ M + G
Sbjct: 390 MINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNG 449

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +  +Y+AL K     G    A R +  ML +GI P   + + +L GFF S K E A+
Sbjct: 450 FAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKAL 509

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             +++  +RG++ +  T+NT+ING  + ++M EAE+L  +MK+    P +I+Y T+  GY
Sbjct: 510 NLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGY 569

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             +   D A RI +E+++    P    + +L+ G   A +  +V  +L EM  R + P +
Sbjct: 570 CKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSP-N 628

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK G L+ A ++   MI   +         L+  F +   +D A  +L 
Sbjct: 629 TVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQ 688

Query: 362 KLVEKEIIL----------RPQSTLDMEASS--------YNPMIQHLCHNGQTGKAEIFF 403
            LV  ++I           +  + +D  A          +N +I  LC  G+   A+   
Sbjct: 689 NLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLL 748

Query: 404 RQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
             L  KG V D   +++LI G S  G  D AF++   M   G+  +   Y  LI    + 
Sbjct: 749 ADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKS 808

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           GE + A +    +   G SP +  + ++++   +DG +  A ++ + M+E+G+   +   
Sbjct: 809 GELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTY 868

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
           + ++  L  +G++EEA+  +D M+++   PN+ +  +++
Sbjct: 869 SILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/608 (22%), Positives = 249/608 (40%), Gaps = 75/608 (12%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F++L+ +    G +  ++++FD M+ LG   S++S +++   + + G        F +M 
Sbjct: 176 FDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQ 235

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P + T  +M   +     +  A+ F E+M   G+ +++V Y+ ++NGY    + +
Sbjct: 236 RAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTN 295

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIK---------------------------------- 239
           +A ++   +  +   P +++YT ++K                                  
Sbjct: 296 DARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAV 355

Query: 240 --GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
             GY  + R +DA R+ +EM    ++ N   Y  ++ G C  G+MVE   +L EM    +
Sbjct: 356 INGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGV 415

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  L+   CK G +N A +    M+R         Y  L++ FC     D A+
Sbjct: 416 RP-DTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
           +L   +++K I   P         S + ++     +G+T KA   +++ + +G+  +   
Sbjct: 475 RLWFLMLKKGI--APNEI------SCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTT 526

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN +I G  K      A E+V  M +   P D   Y  L   Y + G+   A   L+ + 
Sbjct: 527 FNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE 586

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G +P    F S++   F   +    + ++  M  +G+  N      ++      G + 
Sbjct: 587 NLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLH 646

Query: 537 EALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS----- 588
            A      M++ G VPN     SL+S    KGK   A  +L   +G D I D+++     
Sbjct: 647 TAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEI 706

Query: 589 ---------------------YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
                                +  V+  L   G+  +A ++L  + +KG V D  +   L
Sbjct: 707 GKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSL 766

Query: 628 IAGLNQEG 635
           I G +  G
Sbjct: 767 IHGCSASG 774



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 122/569 (21%), Positives = 259/569 (45%), Gaps = 27/569 (4%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           DE +F  +I  Y + G ++++ ++ + M    ++ ++  Y+ +     + GR + A    
Sbjct: 348 DEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNIL 407

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
           ++M   G+ P  ++YN ++ G+     +  A   +  M   G +   +TYN ++ G+   
Sbjct: 408 HEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSL 467

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
             +D+A +L+  M +K I P  IS +T++ G+    + + AL ++ E  +  +  N  T+
Sbjct: 468 GSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTF 527

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
             ++ GLC   +M E ++++ +M +   PP D   +  L    CK G ++ A+ +L  + 
Sbjct: 528 NTVINGLCKIERMPEAEELVDKMKQWRCPP-DIITYRTLFSGYCKIGDMDRASRILNELE 586

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
            L        +  LI     A+ + +   +L ++  +   L P +       +Y  +I  
Sbjct: 587 NLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRG--LSPNTV------AYGALIAG 638

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDPVAF--NNLIRGHSKEGNPDSAFEIVK-IMGRRGVP 446
            C  G    A   + ++++KG++ P  F  ++L+    ++G  D A  +++ ++G   +P
Sbjct: 639 WCKEGDLHTAYNLYLEMIEKGLV-PNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIP 697

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D  A        L  G+ A+    +D++    H  A  ++  V+  L + GR++ A  +
Sbjct: 698 -DISA------PRLEIGKVAN---FIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNL 747

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           +  + +KG   +    + ++      G V+ A    D M+  G  PN   ++SL+  L +
Sbjct: 748 LADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCK 807

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+   AV L      +    +  +Y  ++D     G    A+ +  +++E+G      +
Sbjct: 808 SGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFT 867

Query: 624 SDKLIAGLNQEGNTKQA-DILSRMIRGEM 651
              LI GL  +G  ++A  +L +MI   +
Sbjct: 868 YSILINGLCTQGYMEEAIKLLDQMIENNV 896



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 2/206 (0%)

Query: 53  NHDRETHLKMIEILG--RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQES 110
           NH     +  I I G  ++G++  A+ +L D+  KG   D   +  LI      G V  +
Sbjct: 720 NHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVA 779

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             + D M  +G+  ++ +Y++L   + + G    A   F K+ ++GI P   TYN ++  
Sbjct: 780 FDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDK 839

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
                 +  A +  + M   GI   V TY+ +ING      M+EA KL  +M E N++P 
Sbjct: 840 HCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPN 899

Query: 231 VISYTTMIKGYVAVERADDALRIFDE 256
            ++Y T+I+GYV  E  D  +   D+
Sbjct: 900 YVTYWTLIQGYVRCESVDVPIMPLDQ 925



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 97/183 (53%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           M+ ++I    K G ++++  +   +K  G      +Y +L       G   +A    + M
Sbjct: 727 MWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTM 786

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS G+ P   TYN +++G   S +L  A+  F+ + ++GIS + +TYNT+I+ + +   +
Sbjct: 787 LSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYI 846

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            EA KL   M E+ I PTV +Y+ +I G       ++A+++ D+M   +V PN VTY  L
Sbjct: 847 TEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTL 906

Query: 273 LPG 275
           + G
Sbjct: 907 IQG 909


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 157/658 (23%), Positives = 299/658 (45%), Gaps = 40/658 (6%)

Query: 11  QNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGL----FNHDRETHLKMIEIL 66
            N +R  + + +   V  VL+  +N     Q  R+V++ G     F H   +   MI IL
Sbjct: 66  NNNVRNHLIRLNPLAVVEVLYRCRNDLTLGQ--RFVDQLGFHFPNFKHTSLSLSAMIHIL 123

Query: 67  GRVGKLNHARCILLDMPKK-GVQ----------------WDEDMFEVLIESYGKKGIVQE 109
            R G+L+ A+  LL M ++ GV                  ++ +F++LI +Y +   ++E
Sbjct: 124 VRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLRE 183

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
           + + F +++  G   S+ + +AL   ++R G   +A   + ++   G+    +T N+M+ 
Sbjct: 184 AHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVN 243

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
                 K+E    F   ++ +G+  D+VTYNT+I+ Y+    M+EA +L   M  K   P
Sbjct: 244 ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP 303

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            V +Y T+I G     + + A  +F EM    + P++ TY +LL   C  G +VE +KV 
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            +M  R + P D   F  ++ +  +SG+L+ A     ++    +  +   Y ILI+ +C+
Sbjct: 364 SDMRSRDVVP-DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
             M   A+ L ++++        Q    M+  +YN ++  LC     G+A+  F ++ ++
Sbjct: 423 KGMISVAMNLRNEML--------QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
            +  D      LI GH K GN  +A E+ + M  + +  D   Y  L++ + + G+   A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           K     M+     P    +  ++ +L   G +  A RV   M+ K +K  + +   +++ 
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL------SEKGKTIAAVKLLDFCLGRDC 582
               G+  +    ++ M+  G VP+  S  +++          K    VK ++   G   
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG-GL 653

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           + D+ +Y  +L       +   A  +L K++E+G   D  +   +I G   + N  +A
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 231/495 (46%), Gaps = 12/495 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+  L + GK+      L  + +KGV  D   +  LI +Y  KG+++E+ ++ + M   G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               V +Y+ +   + + G+Y  AK  F +ML  G+ P   TY  +L        +    
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F DM+SR +  D+V +++M++ + R   +D+A   F  +KE  + P  + YT +I+GY
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                   A+ + +EM       + VTY  +L GLC    + E  K+  EM ER + P D
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP-D 479

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +     L+   CK G+L  A ++ + M    I  +   Y  L++ F K    D A ++  
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-NNL 420
            +V KEI+  P         SY+ ++  LC  G   +A   + +++ K +   V   N++
Sbjct: 540 DMVSKEILPTP--------ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED-- 478
           I+G+ + GN       ++ M   G   D  +Y  LI  ++R+   + A   +  M E+  
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P    + S++       +++ A  V++ M+E+GV  +      ++   + + ++ EA
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711

Query: 539 LGRIDLMMQSGSVPN 553
               D M+Q G  P+
Sbjct: 712 FRIHDEMLQRGFSPD 726



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 214/465 (46%), Gaps = 17/465 (3%)

Query: 25  LVYNVLHGAKNS----EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN L  A +S    E A +    +   G F+    T+  +I  L + GK   A+ +  
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFA 329

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M + G+  D   +  L+    KKG V E+ K+F  M+   V   +  + ++  L  R G
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A  YFN +   G+ P    Y +++ G+     +  A+    +M  +G ++DVVTYN
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++G  + K + EA+KLF EM E+ + P   + T +I G+  +    +A+ +F +MK  
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            ++ + VTY  LL G    G +   +++  +MV + I P   S +  L+   C  GHL  
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS-YSILVNALCSKGHLAE 568

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  V   MI  +I         +I+ +C++         L+K++ +  +  P      + 
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV--P------DC 620

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG---VLDPVAFNNLIRGHSKEGNPDSAFEIV 437
            SYN +I          KA    +++ ++    V D   +N+++ G  ++     A  ++
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           + M  RGV  D   Y C+I  ++ +    +A    D M++ G SP
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 122/233 (52%), Gaps = 3/233 (1%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N ++A++ F+ ++   +   D  T+  +++  G+VG ++ A+ I  DM  K +      +
Sbjct: 495 NLQNAMELFQKMKEKRI-RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            +L+ +   KG + E+ +++D M    ++ +V   +++ K   R G     + +  KM+S
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR--GISLDVVTYNTMINGYNRFKKM 212
           EG  P   +YN +++GF     +  A    + M+    G+  DV TYN++++G+ R  +M
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
            EAE +  +M E+ + P   +YT MI G+V+ +   +A RI DEM      P+
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 7/283 (2%)

Query: 25  LVYN-VLHGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN +LHG    K    A + F  +    LF  D  T   +I+   ++G L +A  +  
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAMELFQ 504

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M +K ++ D   +  L++ +GK G +  + +I+  M    +  +  SY  L   +  +G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A R +++M+S+ I+PT    N M+ G+  S        F E M S G   D ++YN
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKN--IEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           T+I G+ R + M +A  L  +M+E+   + P V +Y +++ G+    +  +A  +  +M 
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              V P+  TYT ++ G      + E  ++  EM++R   P D
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 151/620 (24%), Positives = 279/620 (45%), Gaps = 50/620 (8%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD-MPK 84
           V  VLH   +  HAL +F+ V       H  ET   M+EIL RV +       + D M +
Sbjct: 94  VLGVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEIL-RVHRRVEDMAFVFDLMQR 152

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           + ++ + D + ++ +S   +G ++++    + M++ G   +  SY+ L   +L+ G    
Sbjct: 153 QIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKE 212

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   + +M+SEG++P+  T++ ++        ++T +   E+M+S G+  ++ TY   I 
Sbjct: 213 ALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIR 272

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              R  K+DEA ++   M +    P V++YT +I       + DDA+ +F +MKS   KP
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           + VTY  LL    D G + +V+K+  EM  + Y P  D   F  L+   CK+G +N A D
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAP--DVVTFTILVNALCKAGRINEAFD 390

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +L  M +  +      Y  LI    +A   D A+ L   +           +L +E ++Y
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM----------ESLGVEPTAY 440

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
             ++                                LI  H K G+P  A E  + M  R
Sbjct: 441 TYIL--------------------------------LIDYHGKSGHPGKALETFEKMKAR 468

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  +  A    + S    G   +AK   + +   G +P S  +  +M+   + G+V  A
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEA 528

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSV 560
            +++  M +   + ++ ++  +++ L   G VEEA     R++ M  + +V  ++ LL+ 
Sbjct: 529 IKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAG 588

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L ++G+   AV+L +   G  C  +  ++  +LD L    +   A  + +K+       D
Sbjct: 589 LGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPD 648

Query: 621 WKSSDKLIAGLNQEGNTKQA 640
             + + +I G  ++   K A
Sbjct: 649 VLTFNTIIHGFIKQNQIKNA 668



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 145/628 (23%), Positives = 289/628 (46%), Gaps = 56/628 (8%)

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            L  +G+L  A+ +  ++   G+  D   + ++++ Y K G V E++K+   M ++  E  
Sbjct: 484  LAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPD 543

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
            V   ++L   + + GR   A + F +M    + PT  TYN++L G     +++ A++ FE
Sbjct: 544  VIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFE 603

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
             M   G S + +T+NT+++   +  ++D A K+F +M   N  P V+++ T+I G++   
Sbjct: 604  SMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQN 663

Query: 246  RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV------------ 293
            +  +A+ +F +MK   ++P+ VT   LLPG+  +G++ +  ++  +              
Sbjct: 664  QIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFW 722

Query: 294  --------------------ERYIP---PKDNSVFMKLLGVQCKSGHLNAAADV-LKAMI 329
                                ER +     KD+SV + ++ V CK    + A +V +K   
Sbjct: 723  EDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTK 782

Query: 330  RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
             L +      Y +LI+ F +    + A  L +++  K     P      +  +YN +I  
Sbjct: 783  ELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEM--KSAGCAP------DTFTYNSLIDA 834

Query: 390  LCHNGQTGKA-EIF--FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
               +G++GK  E+F  + +++ +G   + + +N +I    K    D A ++   +     
Sbjct: 835  ---HGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDF 891

Query: 446  PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
                  +  LI+  L+ G   DA    D M+  G  P S+++  ++    + G V TA  
Sbjct: 892  SPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACE 951

Query: 506  VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
              K MV++G++ +L     +++ L + G V++AL   + + Q+G  P+   ++ +++ L 
Sbjct: 952  FFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLG 1011

Query: 563  EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
               +T  A+ L      R  + DL +Y  ++  L   G    A  I  ++   G   +  
Sbjct: 1012 RSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVF 1071

Query: 623  SSDKLIAGLNQEGNTKQA-DILSRMIRG 649
            + + LI G    GN++ A  I  +M+ G
Sbjct: 1072 TYNALIRGYTLSGNSELAYGIYKKMMVG 1099



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 191/405 (47%), Gaps = 24/405 (5%)

Query: 89   WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA----LFKLILRRGRYMM 144
            W++ M  +L E+  +K I         +  +  V R++   D+    + K++ +  +  +
Sbjct: 722  WEDVMGGILTEAGTEKAI---------LFGERLVCRAICKDDSVLIPIIKVLCKHKKTSV 772

Query: 145  AKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A+  F K   E G++PT   YN+++ GF     +E A   FE+MKS G + D  TYN++I
Sbjct: 773  ARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLI 832

Query: 204  NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            + + +  K++E   L+ EM  +  +P  I+Y  +I   V   R D A+ ++  + S D  
Sbjct: 833  DAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFS 892

Query: 264  PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            P   T+  L+ GL  +G++ +  ++   MV     P +++++  L+    K GH++ A +
Sbjct: 893  PTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRP-NSAIYNILVNGYGKLGHVDTACE 951

Query: 324  VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
              K M++  I  +   Y IL++  C A   D A+   +KL         Q+ LD +  +Y
Sbjct: 952  FFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKL--------KQAGLDPDLVAY 1003

Query: 384  NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
            N MI  L  + +T +A   F ++  +G++ D   +N+LI      G  + A +I + +  
Sbjct: 1004 NLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQF 1063

Query: 443  RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
             G+  +   Y  LI  Y   G    A      M+  G  P +  F
Sbjct: 1064 IGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 126/559 (22%), Positives = 232/559 (41%), Gaps = 21/559 (3%)

Query: 2    AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSE----HALQFFRWVERAGLFNHDRE 57
             E AW    + +   L P     + YN+L      E     A+Q F  +   G  + +  
Sbjct: 560  VEEAWQMFCRMEEMNLAPTV---VTYNILLAGLGKEGQIQKAVQLFESMNGHGC-SPNTI 615

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            T   +++ L +  +++ A  +   M     + D   F  +I  + K+  ++ ++ +F  M
Sbjct: 616  TFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLK 176
            K+L     V +   L   +++ G+   A R       + G    R  +  ++ G      
Sbjct: 676  KKLLRPDHV-TLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAG 734

Query: 177  LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYT 235
             E AI F E +  R I  D      +I    + KK   A  +F +  KE  ++PT+  Y 
Sbjct: 735  TEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYN 794

Query: 236  TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
             +I G++ V   + A  +F+EMKS    P+  TY +L+     +GK+ E+  +  EM+ R
Sbjct: 795  LLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTR 854

Query: 296  YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
               P +   +  ++    KS  L+ A D+   ++          +G LI+   K+   D 
Sbjct: 855  GCKP-NTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDD 913

Query: 356  AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
            A ++ D +V      RP S +      YN ++      G    A  FF++++K+G+  D 
Sbjct: 914  AHEMFDGMVHYGC--RPNSAI------YNILVNGYGKLGHVDTACEFFKRMVKEGIRPDL 965

Query: 415  VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             ++  L+      G  D A    + + + G+  D  AY  +I    R     +A +    
Sbjct: 966  KSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025

Query: 475  MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
            M   G  P    + S++ +L   G ++ A ++ + +   G+K N+     ++    + G+
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGN 1085

Query: 535  VEEALGRIDLMMQSGSVPN 553
             E A G    MM  G  PN
Sbjct: 1086 SELAYGIYKKMMVGGCDPN 1104



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 115/224 (51%)

Query: 49   AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
            +G F+    T   +I+ L + G+L+ A  +   M   G + +  ++ +L+  YGK G V 
Sbjct: 888  SGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVD 947

Query: 109  ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
             + + F  M + G+   +KSY  L  ++   GR   A  YF K+   G++P    YN+M+
Sbjct: 948  TACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMI 1007

Query: 169  WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
             G   S + E A+  F +M++RGI  D+ TYN++I        ++EA K++ E++   ++
Sbjct: 1008 NGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLK 1067

Query: 229  PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            P V +Y  +I+GY     ++ A  I+ +M      PN  T+  L
Sbjct: 1068 PNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 248/557 (44%), Gaps = 25/557 (4%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  +  ++  + + +  RGR   A    ++M  +G  P    Y+V+L     S     ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R  E M ++G +LD    N ++N       +DEA  L  ++     E  ++SY  ++KG 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +R  D   + DEM   D  PN VT+  L+  LC  G    V +VL +M E    P D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP-D 285

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             ++  ++   CK GHL  A ++L  M    +      Y  +++  C AE +  A +LL 
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           ++ +K+  L        +  ++N ++   C NG   +      Q++  G + D + +  +
Sbjct: 346 EMFQKDCPL--------DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  KEG  D A  ++K M   G   +  +Y  +++     G   DA+  +  MI+ G 
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    F +++  L + G V+ A  ++K M+  G   +L   + +++ L   G  EEAL 
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            +++M+  G  PN   + S+   LS +G+    +++ D         D   Y  V+ +L 
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI-RGEM---- 651
              +T  A      ++  G + +  +   LI GL  EG  K+A ++LS +  RG +    
Sbjct: 578 KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637

Query: 652 ------SRGSQKEKKQK 662
                 S  +Q+  KQK
Sbjct: 638 MRHFGISNCTQENGKQK 654



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 242/522 (46%), Gaps = 13/522 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L   G++  A  +L +M  KG      M+ V++E+  + G  + SV++ + M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G      + + +   I  +G    A     K+   G E    +YN +L G  ++ + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                  ++M     + ++VT+NT+I    R    +   ++ A+M E    P +  Y T+
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G       + A  I + M S+ +KPN V Y  +L GLC A +  E +++L EM ++  
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D+  F  L+   C++G ++   ++L+ M+      +   Y  +I  FCK  + D A+
Sbjct: 353 -PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            LL  +       +P +       SY  +++ LC  G+   AE    Q++++G   +PV 
Sbjct: 412 MLLKSM--SSCGCKPNTV------SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN LI    K+G  + A E++K M   G   D  +Y  +I+   + G+  +A   L+ M+
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G SP + ++ S+  +L  +GRV    ++  ++ +  ++ +  L   ++ +L  R   +
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
            A+     M+ +G +PN   +  L+  L+ +G    A +LL 
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 176/384 (45%), Gaps = 33/384 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI    + G+ +   ++   M + G    ++ Y  +   I + G   +A    N+M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S G++P    YN +L G   + + + A     +M  +   LD VT+N +++ + +   +D
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
              +L  +M      P VI+YTT+I G+      D+A+ +   M S   KPN V+YT +L
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC AG+ V+ ++++ +M+++  PP +   F  L+   CK G +  A ++LK M+    
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPP-NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ-------------------- 373
             +   Y  +I+   KA   + A++LL+ +V K I   P                     
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI--SPNTIIYSSIACALSREGRVNKV 550

Query: 374 ---------STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
                    +T+  +A  YN +I  LC   +T +A  FF  ++  G + +   +  LI+G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPR 447
            + EG    A E++  +  RG  R
Sbjct: 611 LASEGLAKEAQELLSELCSRGALR 634



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 199/483 (41%), Gaps = 51/483 (10%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VV YN M+ GY R  ++  A +L A +    + P   ++  +++G     R  DAL + D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM      P    Y  +L   C +G      +VL  M  +     D      +L   C+ 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGC-TLDTGNCNLVLNAICEQ 194

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G ++ A  +L+ +       +   Y  +++  C A+ +    +L+D++V  +    P   
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC--APNIV 252

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
                 ++N +I +LC NG   +      Q+ + G    +  +  +I G  KEG+ + A 
Sbjct: 253 ------TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 435 EIVKIMGRRGVPRDADAY------IC----------LIESYLRKGEPADAKT-------- 470
           EI+  M   G+  +   Y      +C          L+    +K  P D  T        
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 471 -----------ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
                       L+ M+  G  P    + +V+    ++G +  A  ++KSM   G K N 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                +L+ L   G   +A   +  M+Q G  PN   F++L++ L +KG    A++LL  
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
            L   C  DL SY  V+D L  AGKT  A  +L  ++ KG   +      +   L++EG 
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 637 TKQ 639
             +
Sbjct: 547 VNK 549



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/390 (21%), Positives = 161/390 (41%), Gaps = 44/390 (11%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  L R G       +L  M + G   D  M+  +I+   K+G ++ + +I + M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRY---------------FN------------ 150
              G++ +V  Y+ + K +    R+  A+                 FN            
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 151 --------KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                   +MLS G  P   TY  ++ GF     ++ A+   + M S G   + V+Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           + G     +  +AE+L ++M ++   P  +++ T+I         + A+ +  +M     
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+ ++Y+ ++ GL  AGK  E  ++L  MV + I P +  ++  +     + G +N   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP-NTIIYSSIACALSREGRVNKVI 551

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   +   +I ++A  Y  +I + CK    DRAI     +V    +  P        S+
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM--PNE------ST 603

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           Y  +I+ L   G   +A+    +L  +G L
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 91/439 (20%), Positives = 179/439 (40%), Gaps = 64/439 (14%)

Query: 271 ALLPGLCDAGKMVEVQK------------VLREMVERY-----------------IPPKD 301
           AL+  LC AG+  E  +                MV  Y                 +PP  
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + F  + G+ C  G +  A +VL  M           Y +++E  C++  +  ++++L+
Sbjct: 112 YTFFPVVRGL-CTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLE 170

Query: 362 KLVEKEI-------------------------ILRPQSTLDMEAS--SYNPMIQHLCHNG 394
            +  K                           +LR  +    EA   SYN +++ LC   
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230

Query: 395 QTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           + G  E    ++++     + V FN LI    + G  +   E++  M   G   D   Y 
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            +I+   ++G    A   L+ M   G  P    + +V++ L    R + A  ++  M +K
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 514 GVKENLDLVAKIL-EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
               + D+   IL +     G V+  +  ++ M+  G +P+   + ++++   ++G    
Sbjct: 351 DCPLD-DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           AV LL       C  +  SY  VL  L +AG+ ++A  ++ +++++G   +  + + LI 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 630 GLNQEGNTKQA-DILSRMI 647
            L ++G  +QA ++L +M+
Sbjct: 470 FLCKKGLVEQAIELLKQML 488


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 152/601 (25%), Positives = 276/601 (45%), Gaps = 54/601 (8%)

Query: 51  LFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQES 110
           +++ D  T   ++  L + GK+  A   +  +  KG+  D   F + I    +   + ++
Sbjct: 11  IYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDA 69

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             +FD M++ G   +  +Y+AL   +   GR   A+  + +M+  G  P   TYN +L G
Sbjct: 70  QTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHG 129

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           F    KL+ A++ F+    RG   DVVTYN +ING+ +  K+DEA+++   M  +++ P 
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE-VQKVL 289
           V++Y +++ G     R D+A R+    K F   PN +TY+ L+ GLC   + +E  +++L
Sbjct: 190 VVTYNSLVNGLCKNGRVDEA-RMLIVDKGF--SPNVITYSTLISGLCRELRRLESARQLL 246

Query: 290 REMVERYIPP---------------KDNSVFMKLLGVQCKSGH----------------- 317
            +MV     P               +  S  +KL G   + G+                 
Sbjct: 247 EKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306

Query: 318 --LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
             +N A ++   +++  +  +A  Y + I+  CKA   + A+ +L  + EK  +  P   
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV--P--- 361

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
              +  S+N +I  LC   +  +AE+    +  KG   + ++FN LI G  + G    A 
Sbjct: 362 ---DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLR---KGEPADAKTALDSMIEDGHSPASSLFRSVM 491
              K M +RGV      Y  L++   +   +G   +A T  D+MIE G  P    + +++
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 478

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           + L + G++  A R++ +M  KG   N+     ++  L     V+EAL     M++ G V
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P+   + +++S L ++     A+ L D  L    +     Y  ++D L A  +   A  +
Sbjct: 539 PDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598

Query: 609 L 609
           L
Sbjct: 599 L 599



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 256/546 (46%), Gaps = 19/546 (3%)

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           +L+ S  K G ++++ +  + +   G+   + +++     + R  R   A+  F+ M   
Sbjct: 21  ILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKH 79

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G  P R TYN +L G     ++  A   +E M   G S DVVTYNT+++G+ +  K+DEA
Sbjct: 80  GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEA 139

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            K+F    ++   P V++Y  +I G+   ++ D+A RI   M S  + P+ VTY +L+ G
Sbjct: 140 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG 199

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC  G++ E + ++   V++   P   +    + G+  +   L +A  +L+ M+      
Sbjct: 200 LCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   Y  LI    + +    A+KL   ++ +          + E  +YN +I  L    +
Sbjct: 257 DIVSYNALIHGLAREQGVSEALKLFGSVLRQ--------GYEPEVPTYNILIDGLLKEDR 308

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A   F  L+K G+  D + +   I G  K G  + A  ++K M  +G   D  ++  
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 368

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I    ++    +A+  L  M   G SP +  F +++      G+ + A    K M+++G
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428

Query: 515 VKENLDLVAKILEALL---MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           VK  +     +++ L      G ++EA+   D M++ G VP+   + +L+  L + GK  
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 488

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A +LL     + CI ++ +Y  ++  L    K   A  +   ++EKG V D  +   +I
Sbjct: 489 DARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTII 548

Query: 629 AGLNQE 634
           + L ++
Sbjct: 549 SALCKQ 554



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 187/393 (47%), Gaps = 16/393 (4%)

Query: 52  FNHDRETHLKMIEILGR-VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQES 110
           F+ +  T+  +I  L R + +L  AR +L  M   G + D   +  LI    ++  V E+
Sbjct: 218 FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEA 277

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           +K+F  + + G E  V +Y+ L   +L+  R   A   F+ ++  G+EP   TY V + G
Sbjct: 278 LKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG 337

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
              + ++E A+   +DM  +G   DVV++N +ING  + K++DEAE L + M+ K   P 
Sbjct: 338 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN 397

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA---GKMVEVQK 287
            IS+ T+I G     +   A+  F EM    VKP  VTY  L+ GLC A   G++ E   
Sbjct: 398 AISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT 457

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +   M+E+   P D   +  L+    K+G L+ A  +L AM           Y  LI   
Sbjct: 458 LFDAMIEKGRVP-DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL 516

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           C  +  D A++L   +VEK  +  P +       +Y  +I  LC      KA   F   +
Sbjct: 517 CGLDKVDEALELFVAMVEKGCV--PDTI------TYGTIISALCKQEMVDKALALFDGSL 568

Query: 408 KKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVK 438
           + GV+ P +  + +LI G       D A ++++
Sbjct: 569 EAGVV-PTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 168/385 (43%), Gaps = 18/385 (4%)

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+A T   LL  L  +GK+ +  + + +++ + +   D S F   +   C++  +  A  
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC--DISTFNIYISGLCRASRIGDAQT 71

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V   M +         Y  L+   C       A  L ++++        ++    +  +Y
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMI--------KAGYSPDVVTY 123

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N ++   C  G+  +A   F   +K+G V D V +N LI G  K    D A  I++ M  
Sbjct: 124 NTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS 183

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF-EDGRVQ 501
             +  D   Y  L+    + G   +A+  +   ++ G SP    + +++  L  E  R++
Sbjct: 184 ESLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLE 240

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLL 558
           +A ++++ MV  G K ++     ++  L     V EAL     +++ G    VP ++ L+
Sbjct: 241 SARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILI 300

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
             L ++ +   A +L    +      D  +Y   +D L  AG+  +A  +L  + EKG V
Sbjct: 301 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 360

Query: 619 TDWKSSDKLIAGLNQEGNTKQADIL 643
            D  S + +I GL +E    +A++L
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEVL 385


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 148/619 (23%), Positives = 287/619 (46%), Gaps = 57/619 (9%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           H  + +++    ++  ALQ F+W      F H + T+  +I+ L    + +    +L +M
Sbjct: 39  HQHIAHLILDQNSATKALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEM 98

Query: 83  PKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           P   G   DE++F  +I   G+  ++   +K+ D++ + G   S+K ++++  ++++   
Sbjct: 99  PHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVDI 158

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            +  + Y  +M+  G++   +T+ +++ G  L+ ++    R  + MKSRG+  + V YNT
Sbjct: 159 DVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNT 218

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++   +  K+  A  L  E++    EP  +++  +I  Y   E    AL + ++  S  
Sbjct: 219 LLHALCKNGKVGRARSLMDEIE----EPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLG 274

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             P+ VT T ++  LC+AG++ E  ++L E VE      D   +  LL   C+ G +  A
Sbjct: 275 FVPDVVTMTKVVEILCNAGRVTEAVEML-ERVEYKGGLVDVVAYNTLLRGFCRLGKIKVA 333

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
              LK M R         Y ILI  FC + M+D A+ + + +            +     
Sbjct: 334 HRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDM--------KTDGISWNFD 385

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKK------GVLDPVAFNNLIRGHSKEGNPDSAFE 435
           +Y+ +I+ L   G+  +  +   +LM++      G + P  +N+++ G  K+   D A E
Sbjct: 386 TYDTLIKGLFFGGRIEEG-LKILELMEESKGGSGGRISP--YNSVLYGLYKKNMWDEALE 442

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
            +  M  +  PR  D  + ++  +  KG   +AK   D MI +G +P   ++  ++    
Sbjct: 443 FLMKM-EKLFPRAVDRSLRIL-GFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFC 500

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
           ++G ++ A  +M  MV  G                              ++ SG    F+
Sbjct: 501 QEGNLREAFELMNEMVGHGY----------------------------FLVASG----FN 528

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +L+     +GK  +A+KLLD  +GR C+ D  +Y  ++DAL   G    A SI  +++EK
Sbjct: 529 ALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEK 588

Query: 616 GGVTDWKSSDKLIAGLNQE 634
           G   D  + + L+  L++E
Sbjct: 589 GITPDSSTWNSLLIRLSKE 607



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 1/166 (0%)

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+  G       F  +M+ L    R+    R+++ M  +GVK N  +   +L AL   G 
Sbjct: 169 MMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGK 228

Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           V  A   +D + +   V  F+ L++   ++   + A+ LL+       + D+ +  KV++
Sbjct: 229 VGRARSLMDEIEEPNDV-TFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVE 287

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            L  AG+   A  +L ++  KGG+ D  + + L+ G  + G  K A
Sbjct: 288 ILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVA 333



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 73/369 (19%), Positives = 136/369 (36%), Gaps = 80/369 (21%)

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           TY AL+  LC   +   V ++L EM      P D  +F+ +                   
Sbjct: 74  TYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTV------------------- 114

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
                           I    +A M    IK+LD L+ K        +L +    +N ++
Sbjct: 115 ----------------IRGLGRARMIPHVIKVLD-LISK---FGKNPSLKI----FNSIL 150

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             L         E + +Q+M  GV  D   F  L++G          F ++++M  RGV 
Sbjct: 151 DVLVKVDIDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVK 210

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            +A  Y  L+ +  + G+   A+    S++++   P    F  ++ +  ++         
Sbjct: 211 PNAVVYNTLLHALCKNGKVGRAR----SLMDEIEEPNDVTFNVLIAAYCKE--------- 257

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGK 566
                     ENL     +LE     G V +             V     ++ +L   G+
Sbjct: 258 ----------ENLVQALVLLEKSFSLGFVPD-------------VVTMTKVVEILCNAGR 294

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              AV++L+    +  ++D+ +Y  +L      GK   A+  L ++  KG + + ++ + 
Sbjct: 295 VTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNI 354

Query: 627 LIAGLNQEG 635
           LI+G    G
Sbjct: 355 LISGFCDSG 363


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 248/557 (44%), Gaps = 25/557 (4%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  +  ++  + + +  RGR   A    ++M  +G  P    Y+V+L     S     ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R  E M ++G +LD    N ++N       +DEA  L  ++     E  ++SY  ++KG 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +R  D   + DEM   D  PN VT+  L+  LC  G    V +VL +M E    P D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP-D 285

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             ++  ++   CK GHL  A ++L  M    +      Y  +++  C AE +  A +LL 
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           ++ +K+  L        +  ++N ++   C NG   +      Q++  G + D + +  +
Sbjct: 346 EMFQKDCPL--------DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  KEG  D A  ++K M   G   +  +Y  +++     G   DA+  +  MI+ G 
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    F +++  L + G V+ A  ++K M+  G   +L   + +++ L   G  EEAL 
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            +++M+  G  PN   + S+   LS +G+    +++ D         D   Y  V+ +L 
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI-RGEM---- 651
              +T  A      ++  G + +  +   LI GL  EG  K+A ++LS +  RG +    
Sbjct: 578 KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637

Query: 652 ------SRGSQKEKKQK 662
                 S  +Q+  KQK
Sbjct: 638 MRHFGISNCTQENGKQK 654



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/521 (24%), Positives = 242/521 (46%), Gaps = 13/521 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L   G++  A  +L +M  KG      M+ V++E+  + G  + SV++ + M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G      + + +   I  +G    A     K+   G E    +YN +L G  ++ + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                  ++M     + ++VT+NT+I    R    +   ++ A+M E    P +  Y T+
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G       + A  I + M S+ +KPN V Y  +L GLC A +  E +++L EM ++  
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D+  F  L+   C++G ++   ++L+ M+      +   Y  +I  FCK  + D A+
Sbjct: 353 -PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            LL  +       +P +       SY  +++ LC  G+   AE    Q++++G   +PV 
Sbjct: 412 MLLKSM--SSCGCKPNTV------SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN LI    K+G  + A E++K M   G   D  +Y  +I+   + G+  +A   L+ M+
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G SP + ++ S+  +L  +GRV    ++  ++ +  ++ +  L   ++ +L  R   +
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
            A+     M+ +G +PN   +  L+  L+ +G    A +LL
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELL 624



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 176/384 (45%), Gaps = 33/384 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI    + G+ +   ++   M + G    ++ Y  +   I + G   +A    N+M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S G++P    YN +L G   + + + A     +M  +   LD VT+N +++ + +   +D
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
              +L  +M      P VI+YTT+I G+      D+A+ +   M S   KPN V+YT +L
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC AG+ V+ ++++ +M+++  PP +   F  L+   CK G +  A ++LK M+    
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPP-NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ-------------------- 373
             +   Y  +I+   KA   + A++LL+ +V K I   P                     
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI--SPNTIIYSSIACALSREGRVNKV 550

Query: 374 ---------STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
                    +T+  +A  YN +I  LC   +T +A  FF  ++  G + +   +  LI+G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPR 447
            + EG    A E++  +  RG  R
Sbjct: 611 LASEGLAKEAQELLSELCSRGALR 634



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 198/479 (41%), Gaps = 51/479 (10%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VV YN M+ GY R  ++  A +L A +    + P   ++  +++G     R  DAL + D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM      P    Y  +L   C +G      +VL  M  +     D      +L   C+ 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGC-TLDTGNCNLVLNAICEQ 194

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G ++ A  +L+ +       +   Y  +++  C A+ +    +L+D++V  +    P   
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC--APNIV 252

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
                 ++N +I +LC NG   +      Q+ + G    +  +  +I G  KEG+ + A 
Sbjct: 253 ------TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 435 EIVKIMGRRGVPRDADAY------IC----------LIESYLRKGEPADAKT-------- 470
           EI+  M   G+  +   Y      +C          L+    +K  P D  T        
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 471 -----------ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
                       L+ M+  G  P    + +V+    ++G +  A  ++KSM   G K N 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                +L+ L   G   +A   +  M+Q G  PN   F++L++ L +KG    A++LL  
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
            L   C  DL SY  V+D L  AGKT  A  +L  ++ KG   +      +   L++EG
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/390 (21%), Positives = 161/390 (41%), Gaps = 44/390 (11%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  L R G       +L  M + G   D  M+  +I+   K+G ++ + +I + M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRY---------------FN------------ 150
              G++ +V  Y+ + K +    R+  A+                 FN            
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 151 --------KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                   +MLS G  P   TY  ++ GF     ++ A+   + M S G   + V+Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           + G     +  +AE+L ++M ++   P  +++ T+I         + A+ +  +M     
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+ ++Y+ ++ GL  AGK  E  ++L  MV + I P +  ++  +     + G +N   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP-NTIIYSSIACALSREGRVNKVI 551

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   +   +I ++A  Y  +I + CK    DRAI     +V    +  P        S+
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM--PNE------ST 603

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           Y  +I+ L   G   +A+    +L  +G L
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 91/439 (20%), Positives = 179/439 (40%), Gaps = 64/439 (14%)

Query: 271 ALLPGLCDAGKMVEVQK------------VLREMVERY-----------------IPPKD 301
           AL+  LC AG+  E  +                MV  Y                 +PP  
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + F  + G+ C  G +  A +VL  M           Y +++E  C++  +  ++++L+
Sbjct: 112 YTFFPVVRGL-CTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLE 170

Query: 362 KLVEKEI-------------------------ILRPQSTLDMEAS--SYNPMIQHLCHNG 394
            +  K                           +LR  +    EA   SYN +++ LC   
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230

Query: 395 QTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           + G  E    ++++     + V FN LI    + G  +   E++  M   G   D   Y 
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            +I+   ++G    A   L+ M   G  P    + +V++ L    R + A  ++  M +K
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 514 GVKENLDLVAKIL-EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
               + D+   IL +     G V+  +  ++ M+  G +P+   + ++++   ++G    
Sbjct: 351 DCPLD-DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           AV LL       C  +  SY  VL  L +AG+ ++A  ++ +++++G   +  + + LI 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 630 GLNQEGNTKQA-DILSRMI 647
            L ++G  +QA ++L +M+
Sbjct: 470 FLCKKGLVEQAIELLKQML 488


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 230/473 (48%), Gaps = 10/473 (2%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           ++ +M K+ V  D     V++++  + G  + ++ + D M   G++  + +Y+++ K + 
Sbjct: 117 VISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 176

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G +  A   F +M   G+ P   ++ +++ GF    ++E A++ +++M+ RGI  D+V
Sbjct: 177 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 236

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           +++ +I  + R  KMD A     EM+   + P  + YT +I G+       DALR+ DEM
Sbjct: 237 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
                 P+ VTY  LL GLC   ++++ + +L EM ER +PP D   F  L+   C  G 
Sbjct: 297 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP-DLCTFTTLIHGYCIEGK 355

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           L+ A  +   M+   +  +   Y  LI+  C+    D+A  L D +  +EI   P     
Sbjct: 356 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIF--PNHV-- 411

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
               +Y+ +I   C  GQ   A  F  +++ KG+L  +  +N++I+G+ + GN     + 
Sbjct: 412 ----TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKF 467

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M    V  D   Y  LI  Y+++ +  DA   L+ M ++   P    +  ++     
Sbjct: 468 LQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV 527

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
            G VQ A  + + M  KG++ +      ++   +  G+ +EA    D M+Q G
Sbjct: 528 HGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 224/467 (47%), Gaps = 12/467 (2%)

Query: 15  RALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P    HN++ +    A ++E A+     +   GL      T+  +++ L R G  +
Sbjct: 124 RCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGL-KPGIVTYNSVLKGLCRSGMWD 182

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +  +M   GV  D   F +LI  + + G ++E++KI+  M+  G++  + S+  L 
Sbjct: 183 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 242

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
            L  RRG+   A  Y  +M   G+ P    Y +++ GF  +  +  A+R  ++M   G  
Sbjct: 243 GLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL 302

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DVVTYNT++NG  + +++ +AE L  EM+E+ + P + ++TT+I GY    + D AL++
Sbjct: 303 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 362

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           FD M +  ++P+ VTY  L+ G+C  G + +   +  +M  R I P ++  +  L+   C
Sbjct: 363 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP-NHVTYSILIDSHC 421

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           + G +  A   L  MI   I      Y  +I+ +C++    +  K L K++  ++     
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV----- 476

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
                +  +YN +I       +   A      + K+ V  D V +N LI G S  GN   
Sbjct: 477 ---SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 533

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           A  I + M  +G+  D   Y+ +I  ++  G   +A    D M++ G
Sbjct: 534 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 251/552 (45%), Gaps = 13/552 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++LI +Y +    +E+ + F ++    V     + +AL   + R G   +A   +  +
Sbjct: 27  VFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLV 86

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            S   E   +T N+M+  +  +L+ +       +M+ R +  DVVT+N M++   R    
Sbjct: 87  FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDA 146

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A  L   M  K ++P +++Y +++KG       D A  +F EM  F V P+  ++T L
Sbjct: 147 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 206

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G++ E  K+ +EM  R I P D   F  L+G+  + G ++ A   L+ M    
Sbjct: 207 IGGFCRVGEIEEALKIYKEMRHRGIKP-DLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   Y ++I  FC+A +   A+++ D++V    +         +  +YN ++  LC 
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL--------PDVVTYNTLLNGLCK 317

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +   AE    ++ ++GV  D   F  LI G+  EG  D A ++   M  + +  D   
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+   R+G+   A    D M      P    +  +++S  E G+V+ A   +  M+
Sbjct: 378 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 437

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
            KG+  N+     I++     G+V +    +  MM +   P+   +++L+    ++ K  
Sbjct: 438 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 497

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A KLL+         D+ +Y  +++     G    A  I  K+  KG   D  +   +I
Sbjct: 498 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 557

Query: 629 AGLNQEGNTKQA 640
            G    GN+K+A
Sbjct: 558 NGHVTAGNSKEA 569



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 211/461 (45%), Gaps = 10/461 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  TH  M++   R G    A  ++  M  KG++     +  +++   + G+  ++ ++F
Sbjct: 129 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 188

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   GV   V+S+  L     R G    A + + +M   GI+P   +++ ++  F   
Sbjct: 189 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 248

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K++ A+ +  +M+  G+  D V Y  +I G+ R   M +A ++  EM      P V++Y
Sbjct: 249 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 308

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++ G     R  DA  + +EM+   V P+  T+T L+ G C  GK+ +  ++   M+ 
Sbjct: 309 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 368

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + + P D   +  L+   C+ G L+ A D+   M    I      Y ILI++ C+    +
Sbjct: 369 QRLRP-DIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 427

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            A   LD+++ K I+            +YN +I+  C +G   K + F +++M   V  D
Sbjct: 428 DAFGFLDEMINKGIL--------PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 479

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + +N LI G+ KE     AF+++ +M +  V  D   Y  LI  +   G   +A    +
Sbjct: 480 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 539

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
            M   G  P    + S++      G  + A ++   M+++G
Sbjct: 540 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 108/487 (22%), Positives = 191/487 (39%), Gaps = 56/487 (11%)

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
           N E    +   M+  Y      D    +  EM+   V P+ VT+  ++     AG     
Sbjct: 90  NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149

Query: 286 QKVLREMVERYIPP---KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
             ++  MV + + P     NSV   L    C+SG  + A +V K M    +  +   + I
Sbjct: 150 MALVDSMVSKGLKPGIVTYNSVLKGL----CRSGMWDKAWEVFKEMDDFGVAPDVRSFTI 205

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEI-------------------------ILRPQSTLD 377
           LI  FC+    + A+K+  ++  + I                          LR      
Sbjct: 206 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265

Query: 378 M--EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
           +  +   Y  +I   C  G    A     +++  G L D V +N L+ G  KE     A 
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            ++  M  RGVP D   +  LI  Y  +G+   A    D+M+     P    + ++++ +
Sbjct: 326 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 385

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
              G +  A+ +   M  + +  N    + ++++   +G VE+A G +D M+  G +PN 
Sbjct: 386 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 445

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++S++      G      K L   +      DL +Y  ++   +   K  +A+ +L  
Sbjct: 446 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL-N 504

Query: 612 IMEKGGV-TDWKSSDKLIAGLNQEGNTKQADIL----------------SRMIRGEMSRG 654
           +MEK  V  D  + + LI G +  GN ++A  +                  MI G ++ G
Sbjct: 505 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 564

Query: 655 SQKEKKQ 661
           + KE  Q
Sbjct: 565 NSKEAFQ 571



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 118/284 (41%), Gaps = 52/284 (18%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + ALQ F  +    L   D  T+  +I+ + R G L+ A  +  DM  + +  +   + +
Sbjct: 357 DKALQLFDTMLNQRL-RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 415

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI+S+ +KG V+++    D M   G+  ++ +Y+++ K   R G     +++  KM+   
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRF--------------------------------- 183
           + P   TYN ++ G+    K+  A +                                  
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 535

Query: 184 --FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             FE M ++GI  D  TY +MING+       EA +L  EM ++  E    + T     +
Sbjct: 536 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQ---F 592

Query: 242 VAVERADDALR-------------IFDEMKSFDVKPNAVTYTAL 272
           V ++ + ++L+              F + + F ++  A  + AL
Sbjct: 593 VNIQNSAESLKQMPMDLKVTCSIYFFAKTQEFAIRGCAFVFGAL 636


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 147/653 (22%), Positives = 311/653 (47%), Gaps = 14/653 (2%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           +W  + + ++R LV   +   V  VL   ++  +AL+FF W +R   + HD   +L M+E
Sbjct: 195 SWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERNALRFFYWADRLWRYRHDSSVYLVMLE 254

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           IL +      A+ IL  M ++ +Q   + F  ++ SY + G +++++K+  +M++ GVE 
Sbjct: 255 ILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEP 314

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           ++   +    +++       A R+  +M+  GI P   TYN ++ G+    +++ A+   
Sbjct: 315 NLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELI 374

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK-EKNIEPTVISYTTMIKGYVA 243
           + M S+G S D V+Y T++    R K+++E  +L  +M+ +  + P  ++Y ++I+    
Sbjct: 375 DQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSK 434

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
               D+AL I  E +    K + V Y+A++   C  GK+ + ++++ EM  +   P D  
Sbjct: 435 HGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDP-DVV 493

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  +L   C+ G L+ A  +++ M +      A  Y   +   C+      A K+++  
Sbjct: 494 TYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMN-- 551

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
           + +E    P       A +Y+ ++  L   G+  +A    R+++ KG   +PV  N L+ 
Sbjct: 552 MSEEEWWTPN------AITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVH 605

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
              ++G P  A +++K    +G   +   +  +I  + +K +   A + LD M      P
Sbjct: 606 SLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHP 665

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            +  + +++++L +  R++ A+ +   M+ +G+  +      ++     +G VE+ L  +
Sbjct: 666 DTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLL 725

Query: 543 DLMMQSGSVPN-FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
             M+        ++ ++  L + G    A  LL   L      D  +   ++++ L  G 
Sbjct: 726 KKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGI 785

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD--ILSRMIRGEMS 652
            ++AY +  ++  +  + D K  +K+   L  EG  ++AD  +L  + RG +S
Sbjct: 786 PMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERGHVS 838


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 143/633 (22%), Positives = 302/633 (47%), Gaps = 41/633 (6%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL---GRVG 70
           ++++VP    + V ++     + + AL F  W+ +   + H   ++  ++ +L   G VG
Sbjct: 81  LKSMVPAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVG 140

Query: 71  KLNHARCIL-------------LDMPKKGVQWDEDM----------FEVLIESYGKKGIV 107
            +   R ++             LD+ +K +  DE            +  L+ S  + G+V
Sbjct: 141 VVFKIRLLMIKSCDSVADTLFVLDLCRK-MNKDESFELKYKLIIGCYNTLLNSLARFGLV 199

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
            E  +++  M +  V  ++ +Y+ +     + G    A +Y + ++  G++P   TY  +
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSL 259

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           + G+     L++A + F++M  +G   + V Y  +I+G    +++DEA  LF +MK+ + 
Sbjct: 260 IMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDC 319

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            PTV +YT +IK     ER  +AL +  EM+   +KPN  TYT L+  LC   K+ + ++
Sbjct: 320 YPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARE 379

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +L +M+E+ + P +   +  L+   CK G +  A DV++ M   ++      Y  LI+ +
Sbjct: 380 LLGQMLEKGLMP-NVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGY 438

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           CK  ++ +A+ +L+K++E++++         +  +YN +I   C +G    A      + 
Sbjct: 439 CKRNVH-KAMGVLNKMLERKVL--------PDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489

Query: 408 KKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
            +G++ DP  + ++I    K    + A ++   + ++ V  +   Y  LI+ Y + G+  
Sbjct: 490 DRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVN 549

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A   L+ M+     P S  F +++  L  DG+++ A+ + + MV+  ++  +     ++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILI 609

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
             LL  G  + A  R   M+ SG+ P+   + + +     +G+   A  ++         
Sbjct: 610 HRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVS 669

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
            DL +Y  ++      G+T +A+ +L ++ + G
Sbjct: 670 PDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTG 702



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 164/642 (25%), Positives = 296/642 (46%), Gaps = 42/642 (6%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + +N + N      N E A Q+   +  AGL + D  T+  +I    +   L+ A  +  
Sbjct: 219 YTYNKMVNGYCKVGNVEEANQYVSMIVEAGL-DPDFFTYTSLIMGYCQRKDLDSAFKVFK 277

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +MP KG + +E  +  LI     +  + E++ +F  MK      +V++Y  L K +    
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSE 337

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A     +M  +GI+P  HTY V++       KLE A      M  +G+  +V+TYN
Sbjct: 338 RKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYN 397

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +INGY +   +++A  +   M+ +N+ P   +Y  +IKGY        A+ + ++M   
Sbjct: 398 ALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLER 456

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+ VTY +L+ G C +G      ++L  M +R + P D   +  ++   CKS  +  
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP-DPWTYTSMIDSLCKSKRVEE 515

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A D+  ++ +  +      Y  LI+ +CKA   + A  +L+K++ K  +  P S      
Sbjct: 516 ACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCL--PNSL----- 568

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHS--KEGNPDSAFEIVK 438
            ++N +I  LC +G+  +A +   +++K   L P    + I  H   K+G+ D A+   +
Sbjct: 569 -TFNALIHGLCTDGKLKEATLLEEKMVKID-LQPTVSTDTILIHRLLKDGDFDHAYRRFQ 626

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G   DA  Y   I++Y R+G   DA+  +  M E+G SP    + S+++   + G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLG 686

Query: 499 RVQTASRVMKSMVEKGVKEN----LDLVAKILE------------ALLMRGHVEE--ALG 540
           R  +A  V+K M + G + +    L L+  +LE              +M   +E    + 
Sbjct: 687 RTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVE 746

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            ++ M++ G  PN   ++ L+  + E G    A K+ D    ++ I   +  E V +ALL
Sbjct: 747 LLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGI---SPSELVFNALL 803

Query: 598 AAGKTLNAYSILFKIMEK----GGVTDWKSSDKLIAGLNQEG 635
           +    L  ++   K+++     G +   +S   LI  L ++G
Sbjct: 804 SCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKG 845



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 148/585 (25%), Positives = 269/585 (45%), Gaps = 34/585 (5%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+ L    + + A  ++ +M +KG++ +   + VLI+S   +  ++++ ++   M
Sbjct: 325 TYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQM 384

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G+  +V +Y+AL     +RG    A      M S  + P   TYN ++ G+     +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGY-CKRNV 443

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+     M  R +  DVVTYN++I+G  R    D A +L + M ++ + P   +YT+M
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSM 503

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I      +R ++A  +FD ++  DV PN V YTAL+ G C AGK+ E   +L +M+ +  
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNC 563

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P ++  F  L+   C  G L  A  + + M+++ +        ILI    K   +D A 
Sbjct: 564 LP-NSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAY 622

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           +   +++         S    +A +Y   IQ  C  G+   AE    ++ + GV  D   
Sbjct: 623 RRFQQML--------SSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFT 674

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL-------RKGEPADAK 469
           +++LI+G+   G  +SAF ++K M   G       ++ LI+  L       + GEP    
Sbjct: 675 YSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCV 734

Query: 470 TA-----------LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK-GVKE 517
            +           L+ M+E G +P +  +  +M  + E G ++ A +V   M +K G+  
Sbjct: 735 MSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISP 794

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLL 574
           +  +   +L          EA   +D M+  G +P  +S   L+  L +KG+      + 
Sbjct: 795 SELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVF 854

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
              L      D  +++ ++D +   G  + A+  LF +MEK G T
Sbjct: 855 QNLLQCGYYDDELAWKIIIDGVGKQG-LVEAFYELFNVMEKNGCT 898



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 143/608 (23%), Positives = 271/608 (44%), Gaps = 92/608 (15%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + ++   L G++    AL   + +E  G+   +  T+  +I+ L    KL  AR +L  M
Sbjct: 326 YTVLIKALCGSERKSEALNLVKEMEEKGI-KPNIHTYTVLIDSLCSQCKLEKARELLGQM 384

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            +KG+  +   +  LI  Y K+G++++++ + ++M+   +  + ++Y+ L K   +R  +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVH 444

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A    NKML   + P   TYN ++ G   S   ++A R    M  RG+  D  TY +M
Sbjct: 445 K-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSM 503

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+   + K+++EA  LF  +++K++ P V+ YT +I GY    + ++A  + ++M S + 
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNC 563

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK---DNSVFMKLLGVQCKSGHLN 319
            PN++T+ AL+ GLC  GK+ E   +  +MV+  + P    D  +  +LL    K G  +
Sbjct: 564 LPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLL----KDGDFD 619

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A    + M+      +A  Y   I+ +C+      A  ++ K+ E  +          +
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGV--------SPD 671

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIR-------GHSKEGNP 430
             +Y+ +I+     G+T  A +  +++   G  +P    F +LI+       G  K G P
Sbjct: 672 LFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGC-EPSQHTFLSLIKHLLEMKYGKVKGGEP 730

Query: 431 -----------DSAFEIVKIMGRRGVPRDADAY------ICLIESYLRKGE--------- 464
                      D   E+++ M   GV  +A +Y      IC I + LR  E         
Sbjct: 731 GVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGN-LRVAEKVFDHMQQK 789

Query: 465 ----PAD------------------AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
               P++                  A   +D MI  GH P     + ++  L++ G  + 
Sbjct: 790 EGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKER 849

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
            + V +++++ G  ++ +L  KI+               ID + + G V  F  L +V+ 
Sbjct: 850 GTSVFQNLLQCGYYDD-ELAWKII---------------IDGVGKQGLVEAFYELFNVME 893

Query: 563 EKGKTIAA 570
           + G T ++
Sbjct: 894 KNGCTFSS 901



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 200/444 (45%), Gaps = 32/444 (7%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD-MPKKGVQWDEDM 93
           N + A +    +   GL   D  T+  MI+ L +  ++  A C L D + +K V  +  M
Sbjct: 477 NFDSAYRLLSLMNDRGLVP-DPWTYTSMIDSLCKSKRVEEA-CDLFDSLEQKDVIPNVVM 534

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI+ Y K G V E+  + + M       +  +++AL   +   G+   A     KM+
Sbjct: 535 YTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMV 594

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
              ++PT  T  +++         + A R F+ M S G   D  TY T I  Y R  ++ 
Sbjct: 595 KIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQ 654

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +AE + A+MKE  + P + +Y+++IKGY  + R + A  +   M     +P+  T+ +L+
Sbjct: 655 DAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLI 714

Query: 274 ---------------PGLCDAGKMVE---VQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
                          PG+C    M+E   V ++L +MVE  + P   S    +LG+ C+ 
Sbjct: 715 KHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGI-CEI 773

Query: 316 GHLNAAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           G+L  A  V   M  +  I      +  L+   CK E ++ A K++D ++   +   PQ 
Sbjct: 774 GNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMIC--VGHLPQ- 830

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD-PVAFNNLIRGHSKEGNPDSA 433
                  S   +I  L   G+  +    F+ L++ G  D  +A+  +I G  K+G  ++ 
Sbjct: 831 -----LESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAF 885

Query: 434 FEIVKIMGRRGVPRDADAYICLIE 457
           +E+  +M + G    +  Y  LIE
Sbjct: 886 YELFNVMEKNGCTFSSQTYSLLIE 909


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/611 (24%), Positives = 285/611 (46%), Gaps = 51/611 (8%)

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A+   L+   +GV+ D   + ++I+++ K   V+ +  +   M+  G   S  ++ ++ 
Sbjct: 262 EAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVI 321

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
              +++G  + A R  ++M+S G++        ++ G+    KL +A+ FF+ M   G S
Sbjct: 322 GACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPS 381

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            + VTY  +I    +   M +A  L+ +MK KNI PTV    ++I+G++ VE  ++A ++
Sbjct: 382 PNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKL 441

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           FDE  + D+  N  TY +LL  LC  GKM E   + ++M+++ + P   S    +LG  C
Sbjct: 442 FDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILG-HC 499

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           + G+L+ AA V   M+   +      Y IL++ + K    + A  + D++V++ I+  P 
Sbjct: 500 RQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIV--PS 557

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL--------------------- 412
                   +YN  I  LC  G+T +A+   ++ ++KG +                     
Sbjct: 558 DF------TYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSS 611

Query: 413 ---------------DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
                          + + +  LI G  K  N D A ++   M  +G+  D  AY  LI+
Sbjct: 612 ALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALID 671

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
            + +K +   A      +++ G SP S ++ S++        ++ A  + K M+ +G+  
Sbjct: 672 GFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISC 731

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           +L     +++ LL  G +  AL     M   G +P+   +  L++ L  KG+   A K+L
Sbjct: 732 DLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKIL 791

Query: 575 DFCLGRDCII-DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
              + RD I  ++  Y  ++     AG    A+ +  ++++KG   +  + D LI G  +
Sbjct: 792 AE-MERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIK 850

Query: 634 EGNTKQADILS 644
            GN+    +LS
Sbjct: 851 GGNSALKSLLS 861



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 158/654 (24%), Positives = 294/654 (44%), Gaps = 39/654 (5%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK-LNHARCILL-- 80
           N++  +L   ++   AL +F+ +E    F    ++   ++ IL R  + L  A+ +L   
Sbjct: 86  NVIDTLLSYKRDPYSALTYFKQLECTRGFVRSLDSLCVLLHILTRSSETLKQAQNLLNRF 145

Query: 81  ------DMPK----------KGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGV 122
                  MP           K   +D D+  +  L+ SY K   + +++  F+ + +  +
Sbjct: 146 ISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDI 205

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
              +K  + L   +++      A+  + KM+ +G+     T ++M+         E A +
Sbjct: 206 VPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKK 265

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
           FF + KSRG+ LD   Y+ +I  + +   ++ A  L  +M++K   P+  ++T++I   V
Sbjct: 266 FFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACV 325

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                 +ALR+ DEM S  V+ N V  T L+ G C   K+V   +   +M E   P  + 
Sbjct: 326 KQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENG-PSPNR 384

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +  L+   CK+G++  A D+   M   +I         LI  F K E  + A KL D+
Sbjct: 385 VTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE 444

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
            V  +I             +YN ++  LC  G+  +A   +++++ KG L P  V++N++
Sbjct: 445 AVACDI---------ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG-LAPTKVSYNSM 494

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I GH ++GN D A  +   M   G+  +   Y  L++ Y + G+   A    D M+++  
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENI 554

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P+   +   +  L + GR   A  ++K  VEKG          I++  +  G V  AL 
Sbjct: 555 VPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALT 614

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
               M +SG  PN   + +L++   +   T  A+K+ +    +   +D+A+Y  ++D   
Sbjct: 615 AYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDG-F 673

Query: 598 AAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
              + +   S LF  +  GG++ +    + LI+G     N + A  L + + GE
Sbjct: 674 CKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGE 727



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/546 (24%), Positives = 235/546 (43%), Gaps = 55/546 (10%)

Query: 45  WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKK 104
           WV   G F         +I    + G +  A  +  +M   GVQ +  +   L++ Y K+
Sbjct: 310 WVPSEGTFT-------SVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQ 362

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
             +  +++ FD M + G   +  +Y  L +   + G    A   + +M ++ I PT    
Sbjct: 363 DKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIV 422

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N ++ GF      E A + F++  +  I+ ++ TYN++++   +  KM EA  L+ +M +
Sbjct: 423 NSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLD 481

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
           K + PT +SY +MI G+      D A  +F +M    +KPN +TY+ L+ G    G    
Sbjct: 482 KGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEY 541

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IP--------- 334
              V   MV+  I P D +  +K+ G+ CK G  + A D+LK  +    +P         
Sbjct: 542 AFYVFDRMVDENIVPSDFTYNIKINGL-CKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIM 600

Query: 335 -------------------TEAG------HYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
                               E+G       Y  LI  FCK    D A+K+ +++  K   
Sbjct: 601 DGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNK--- 657

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKE 427
                 L+++ ++Y  +I   C       A   F +L+  G L P  V +N+LI G+   
Sbjct: 658 -----GLELDIAAYGALIDGFCKKQDIETASWLFSELLDGG-LSPNSVIYNSLISGYRNL 711

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
            N ++A  + K M   G+  D   Y  LI+  L++G    A      M   G  P   ++
Sbjct: 712 NNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIY 771

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++  L   G+++ A +++  M    +  N+ +   ++      G+++EA    + M+ 
Sbjct: 772 TVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLD 831

Query: 548 SGSVPN 553
            G  PN
Sbjct: 832 KGLTPN 837



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 218/481 (45%), Gaps = 12/481 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+FF  +   G  + +R T+  +IE   + G +  A  +   M  K +     +   LI
Sbjct: 368 ALEFFDKMNENGP-SPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLI 426

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             + K    +E+ K+FD      +  ++ +Y++L   + + G+   A   + KML +G+ 
Sbjct: 427 RGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLA 485

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT+ +YN M+ G      L+ A   F DM   G+  +V+TY+ +++GY +    + A  +
Sbjct: 486 PTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYV 545

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M ++NI P+  +Y   I G   V R  +A  +  +       P  +TY +++ G   
Sbjct: 546 FDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIK 605

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G +       REM E  + P +   +  L+   CK+ + + A  +   M    +  +  
Sbjct: 606 EGSVSSALTAYREMCESGVSP-NVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIA 664

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            YG LI+ FCK +  + A  L  +L++    L P S +      YN +I    +      
Sbjct: 665 AYGALIDGFCKKQDIETASWLFSELLDGG--LSPNSVI------YNSLISGYRNLNNMEA 716

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A    ++++ +G+  D   +  LI G  KEG    A ++   M  +G+  D   Y  LI 
Sbjct: 717 ALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLIN 776

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
               KG+  +A+  L  M  D  +P   ++ +++   F+ G +Q A R+   M++KG+  
Sbjct: 777 GLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTP 836

Query: 518 N 518
           N
Sbjct: 837 N 837



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 192/423 (45%), Gaps = 11/423 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L + GK++ A  +   M  KG+   +  +  +I  + ++G +  +  +F  M
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G++ +V +Y  L     + G    A   F++M+ E I P+  TYN+ + G     + 
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A    +    +G     +TYN++++G+ +   +  A   + EM E  + P VI+YTT+
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL 634

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G+      D AL++ +EM++  ++ +   Y AL+ G C    +     +  E+++  +
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P ++ ++  L+       ++ AA ++ K M+   I  +   Y  LI+   K      A+
Sbjct: 695 SP-NSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLAL 753

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA- 416
            L  ++  K II  P   +      Y  +I  LC  GQ   A+    ++ +  +   V  
Sbjct: 754 DLYSEMSAKGII--PDIII------YTVLINGLCGKGQLENAQKILAEMERDSITPNVPI 805

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N LI GH K GN   AF +   M  +G+  +   Y  LI   ++ G  A  K+ L    
Sbjct: 806 YNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSA-LKSLLSLKF 864

Query: 477 EDG 479
           +DG
Sbjct: 865 KDG 867



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 2/310 (0%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           ++E+A   F  +    +   D   ++K I  L +VG+ + A+ +L    +KG       +
Sbjct: 538 DTEYAFYVFDRMVDENIVPSDFTYNIK-INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTY 596

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             +++ + K+G V  ++  +  M + GV  +V +Y  L     +     +A +  N+M +
Sbjct: 597 NSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRN 656

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
           +G+E     Y  ++ GF     +ETA   F ++   G+S + V YN++I+GY     M+ 
Sbjct: 657 KGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEA 716

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A  L   M  + I   + +YTT+I G +   R   AL ++ EM +  + P+ + YT L+ 
Sbjct: 717 ALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLIN 776

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GLC  G++   QK+L EM    I P +  ++  L+    K+G+L  A  +   M+   + 
Sbjct: 777 GLCGKGQLENAQKILAEMERDSITP-NVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLT 835

Query: 335 TEAGHYGILI 344
                Y ILI
Sbjct: 836 PNDTTYDILI 845



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 166/360 (46%), Gaps = 20/360 (5%)

Query: 17  LVPQ-FDHNLVYNVLHG-AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           +VP  F +N+  N L    + SE      ++VE+   F     T+  +++   + G ++ 
Sbjct: 554 IVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKG--FVPVCLTYNSIMDGFIKEGSVSS 611

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A     +M + GV  +   +  LI  + K      ++K+ + M+  G+E  + +Y AL  
Sbjct: 612 ALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALID 671

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
              ++     A   F+++L  G+ P    YN ++ G+     +E A+   + M   GIS 
Sbjct: 672 GFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISC 731

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D+ TY T+I+G  +  ++  A  L++EM  K I P +I YT +I G     + ++A +I 
Sbjct: 732 DLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKIL 791

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM+   + PN   Y AL+ G   AG + E  ++  EM+++ + P D +  + +      
Sbjct: 792 AEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI------ 845

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           +G +      LK+++ L      G   I           D   K+++K V K   LRP++
Sbjct: 846 NGKIKGGNSALKSLLSLKFKDGKGMKRI--------NEQDSIKKVIEKAVNK--YLRPEA 895


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 236/484 (48%), Gaps = 10/484 (2%)

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           + + A  ++ +M K+ V  D     VLI++  + G V  ++ + D M   G++  + +++
Sbjct: 172 EFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFN 231

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
           ++ K + +  R+  AK  F  M    + P   ++N+++ GF    ++E A++F+++M+ R
Sbjct: 232 SVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQR 291

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G++ DVV+++ +I  ++   KMD A     EMK   + P  + YT +I G+       +A
Sbjct: 292 GVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA 351

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           LR+ DEM      P+ VTY  LL GLC   ++++ +++L EM ER + P D   F  L+ 
Sbjct: 352 LRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP-DLCTFTTLIH 410

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             C+ G+   A  +   ++   +  +   Y  LI+  C+     +A +L D +  +EI  
Sbjct: 411 GYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIF- 469

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGN 429
            P         +Y+ +I   C  GQ  +A  F  +++ KG L  +  +N++I+G+ + GN
Sbjct: 470 -PNHV------TYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGN 522

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
                + ++ M +  +  D   +  LI  Y+++     A    + M ++   P +  +  
Sbjct: 523 VKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNM 582

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++    E G ++ A RV K M   G++ +      ++   +  G+ +EA    D MM  G
Sbjct: 583 IINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRG 642

Query: 550 SVPN 553
             P+
Sbjct: 643 FAPD 646



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 253/552 (45%), Gaps = 13/552 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++LI +Y +    +E+ + F ++    V     + +AL   + R G   +A+  +  +
Sbjct: 89  VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRLV 148

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS   E   +T N+M+  +  SL+ + A     +M+ R +  DVVT+N +I+   R   +
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDV 208

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D A  L   M  K ++P ++++ +++KG     R D A  +F  M    V P+  ++  L
Sbjct: 209 DAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNIL 268

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G++ E  K  +EM +R + P D   F  L+G+    G ++ AA  L+ M  L 
Sbjct: 269 IGGFCRVGEVEEAMKFYKEMQQRGVTP-DVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   Y ++I  FC+A     A+++ D++V    +         +  +YN ++  LC 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCL--------PDVVTYNTLLNGLCK 379

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +   AE    ++ ++GV  D   F  LI G+ ++GN + A ++   +  + +  D  A
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+   RKG+ A A    D M      P    +  +++S  E G+V+ A   +  MV
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMV 499

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
            KG   N+     I++     G+V++    +  MMQ   +P+   F++L+    ++    
Sbjct: 500 SKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMH 559

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A  + +         D  +Y  +++     G    A  +  K+   G   D  +   LI
Sbjct: 560 GAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLI 619

Query: 629 AGLNQEGNTKQA 640
            G    GN+K+A
Sbjct: 620 NGHVTAGNSKEA 631



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 208/461 (45%), Gaps = 10/461 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  TH  +I+   R G ++ A  ++  M  KG++     F  +++   K     ++ ++F
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF 250

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M Q  V   V+S++ L     R G    A +++ +M   G+ P   +++ ++  F   
Sbjct: 251 RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K++ A  +  +MK  G+  D V Y  +I G+ R   M EA ++  EM      P V++Y
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++ G     R  DA  + +EMK   V P+  T+T L+ G C  G   +  ++   ++ 
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + + P D   +  L+   C+ G L  A ++   M    I      Y ILI++ C+    +
Sbjct: 431 QRLRP-DVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVE 489

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A   LD++V K  +            +YN +I+  C +G   K + F +++M+  +L D
Sbjct: 490 EAFGFLDEMVSKGNL--------PNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + FN LI G+ KE N   AF +  IM +  V  DA  Y  +I  +  +G   +A     
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
            M   G  P    + S++      G  + A ++   M+ +G
Sbjct: 602 KMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRG 642



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 195/413 (47%), Gaps = 11/413 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A + FR +++  +    R  ++ +I    RVG++  A     +M ++GV  D   F  
Sbjct: 244 DKAKEVFRAMDQCSVAPDVRSFNI-LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSC 302

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI  +  +G +  +      MK LG+      Y  +     R G    A R  ++M+  G
Sbjct: 303 LIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLG 362

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P   TYN +L G     +L  A     +MK RG++ D+ T+ T+I+GY R    ++A 
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKAL 422

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +LF  +  + + P V++Y ++I G         A  ++D+M + ++ PN VTY+ L+   
Sbjct: 423 QLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSH 482

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C+ G++ E    L EMV +   P +   +  ++   C+SG++      L+ M++ +I  +
Sbjct: 483 CEKGQVEEAFGFLDEMVSKGNLP-NIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              +  LI  + K E    A  + + ++EKE++ +P      +A +YN +I      G  
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFN-IMEKEMV-QP------DAVTYNMIINGFSEQGNM 593

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
            +A   F+++   G+  D   + +LI GH   GN   AF++   M  RG   D
Sbjct: 594 EEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/540 (20%), Positives = 223/540 (41%), Gaps = 36/540 (6%)

Query: 135 LILRRGRYMMAKR--YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
           L+LR  R   A R    + +L+    P    +++++  +  S K   A   F  +    +
Sbjct: 59  LLLRMSRRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRV 118

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
            +     N ++   +R      AE+ +  +   + E    +   M+  Y      D A  
Sbjct: 119 PVPASASNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADT 178

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +  EM+   V P+ VT+  L+     AG +     ++  M  + + P   + F  +L   
Sbjct: 179 VISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVT-FNSVLKGL 237

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---- 368
           CK    + A +V +AM + S+  +   + ILI  FC+    + A+K   ++ ++ +    
Sbjct: 238 CKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDV 297

Query: 369 --------ILRPQSTLDMEASS---------------YNPMIQHLCHNGQTGKAEIFFRQ 405
                   +   +  +D  A+                Y  +I   C  G   +A     +
Sbjct: 298 VSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDE 357

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           ++  G L D V +N L+ G  K+     A E++  M  RGV  D   +  LI  Y R G 
Sbjct: 358 MVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGN 417

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              A    D+++     P    + S+++ +   G +  A+ +   M  + +  N    + 
Sbjct: 418 FEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSI 477

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           ++++   +G VEEA G +D M+  G++PN   ++S++      G      + L   +  +
Sbjct: 478 LIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDN 537

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQA 640
            + DL ++  ++   +       A+++ F IMEK  V  D  + + +I G +++GN ++A
Sbjct: 538 ILPDLITFNTLIHGYIKEENMHGAFNV-FNIMEKEMVQPDAVTYNMIINGFSEQGNMEEA 596



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 132/282 (46%), Gaps = 35/282 (12%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L +  +L  A  +L +M ++GV  D   F  LI  Y + G  ++++++F
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKR--------------------------- 147
           D +    +   V +Y++L   + R+G    A                             
Sbjct: 426 DTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEK 485

Query: 148 --------YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                   + ++M+S+G  P   TYN ++ G+  S  ++   +F + M    I  D++T+
Sbjct: 486 GQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITF 545

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+I+GY + + M  A  +F  M+++ ++P  ++Y  +I G+      ++A R+F +M +
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGA 605

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             ++P+  TY +L+ G   AG   E  ++  EM+ R   P D
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDD 647


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 233/492 (47%), Gaps = 41/492 (8%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWV--ERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           Q  ++LV  ++   K+    L  F     E +  F HD  T   MI  L  V +   A  
Sbjct: 12  QITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEG 71

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  M ++  +  ED+F  +   YG+     +++++F  M+   V+ + KSY  +F +++
Sbjct: 72  MLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILV 131

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK-LETAIRFFEDMKSRGISLDV 196
                  A  ++ +M  +GI PT  + N+++     + + +E+A R F +M +RG   D 
Sbjct: 132 EENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDS 191

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
            TY T+ING  +  K+ +A++L  EM+EK + P+V+SYT++I G       D+A+ + +E
Sbjct: 192 YTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEE 251

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    ++PN  TY++L+ GLC +G   +  ++L  MV R + P +   +  L+   CK G
Sbjct: 252 MIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLP-NMVTYSTLINGLCKEG 310

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP-QST 375
               A ++L  M    +  +AG YG +I   C A  Y  A   +D++    I   P +++
Sbjct: 311 KHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGI--SPNRAS 368

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFE 435
                  +N ++Q LC+N                                   +P  AF+
Sbjct: 369 WTFHVKMHNMVVQGLCNN----------------------------------VDPTRAFQ 394

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   M  RG+  +   + CL++ + ++G+   A   L+ MI DG  P   ++  +M  L+
Sbjct: 395 LYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLW 454

Query: 496 EDGRVQTASRVM 507
           +  +V+  + ++
Sbjct: 455 DRKKVRETTELL 466



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 188/433 (43%), Gaps = 21/433 (4%)

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S G     +T+  M+       +   A    E MK     +    + T+  GY R  +  
Sbjct: 43  SNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPL 102

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A ++F +M++  ++PT  SY T+    V       A+  + EM+   + P  V+   L+
Sbjct: 103 DAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILI 162

Query: 274 PGLCDAGKMVEVQ-KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
             LC   + VE   ++ REM  R   P D+  +  L+   CK G ++ A ++L  M    
Sbjct: 163 KALCKNEETVESAFRLFREMPNRGCQP-DSYTYGTLINGLCKLGKISQAKELLDEMEEKG 221

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  LI   C++   D AI+LL++++   I        +    +Y+ ++  LC 
Sbjct: 222 LSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGI--------EPNVFTYSSLMDGLCK 273

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           +G + +A      ++++ +L + V ++ LI G  KEG    A EI+  M  +G+  DA  
Sbjct: 274 SGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGM 333

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSP--ASSLFRSVMESLFEDGRVQT-----AS 504
           Y  +I          +A   +D M   G SP  AS  F   M ++   G         A 
Sbjct: 334 YGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAF 393

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
           ++  SM  +G+   +     +++    RG + +A   ++ M+  G +P+   ++ L+  L
Sbjct: 394 QLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGL 453

Query: 562 SEKGKTIAAVKLL 574
            ++ K     +LL
Sbjct: 454 WDRKKVRETTELL 466



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 125/248 (50%), Gaps = 6/248 (2%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSK-EGNPDSAFEIVKI 439
           SY  +   L       +A  F++++ +KG+   V + N LI+   K E   +SAF + + 
Sbjct: 122 SYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFRE 181

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  RG   D+  Y  LI    + G+ + AK  LD M E G SP+   + S++  L +   
Sbjct: 182 MPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNN 241

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           +  A  +++ M+  G++ N+   + +++ L   GH  +A+  +++M++   +PN   + +
Sbjct: 242 LDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYST 301

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L++ L ++GK   AV++LD    +    D   Y +++  L AA     A + + + M  G
Sbjct: 302 LINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDE-MALG 360

Query: 617 GVTDWKSS 624
           G++  ++S
Sbjct: 361 GISPNRAS 368



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 5/204 (2%)

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
           D ++ +   Y R   P DA      M +    P    + +V + L E+  V+ A    K 
Sbjct: 86  DVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKE 145

Query: 510 MVEKGVKENLDLVAKILEALLMRGH-VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
           M EKG+   +  +  +++AL      VE A      M   G  P+   + +L++ L + G
Sbjct: 146 MREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLG 205

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           K   A +LLD    +     + SY  ++  L  +     A  +L +++  G   +  +  
Sbjct: 206 KISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYS 265

Query: 626 KLIAGLNQEGNTKQA-DILSRMIR 648
            L+ GL + G++ QA ++L  M+R
Sbjct: 266 SLMDGLCKSGHSSQAMELLEVMVR 289



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 5/209 (2%)

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   D + +  +I   +   +   A+  L+ M ++       +F ++        R   A
Sbjct: 45  GFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDA 104

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL---LSV 560
            RV   M +  VK        + + L+   HV+ A+G    M + G  P   SL   +  
Sbjct: 105 IRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKA 164

Query: 561 LSEKGKTI-AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           L +  +T+ +A +L      R C  D  +Y  +++ L   GK   A  +L ++ EKG   
Sbjct: 165 LCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSP 224

Query: 620 DWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
              S   LI GL Q  N  +A ++L  MI
Sbjct: 225 SVVSYTSLIHGLCQSNNLDEAIELLEEMI 253



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/214 (19%), Positives = 90/214 (42%), Gaps = 43/214 (20%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +++ L + G  + A  +L  M ++ +  +   +  LI    K+G  +E+V+I D M
Sbjct: 263 TYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRM 322

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY-------NVMLWG 170
           +  G++     Y  +   +     Y  A  + ++M   GI P R ++       N+++ G
Sbjct: 323 RLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQG 382

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY------------------------ 206
              ++    A + +  M++RGIS+++ T++ ++  +                        
Sbjct: 383 LCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPD 442

Query: 207 ------------NRFKKMDEAEKLFAEMKEKNIE 228
                       +R K  +  E L AE+K+K +E
Sbjct: 443 EGMWNVLMCGLWDRKKVRETTELLVAELKQKFVE 476


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 153/650 (23%), Positives = 288/650 (44%), Gaps = 82/650 (12%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR-------------- 138
           + +VL+++Y K G V+ + ++  +M  LG+  + +  + L K +LR              
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236

Query: 139 --------------------RGR-YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
                               + R +  AK+ F +M          TYNVM+ G   S  +
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A  F E+M   G+S D  TY  ++NG  +  ++ EA+ L  EM    ++P V+ Y T+
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G++   +A +A  I +EM S  V+PN + Y  L+ GLC  G++    K+L EM++   
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  L+    +    + A ++L  M    I   A  YGI+I   C+      A 
Sbjct: 417 RP-DTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 358 KLLDKLV--------------------EKEIILRPQSTLDMEASS-------YNPMIQHL 390
            LL++++                    E  I L  +S  +M  ++       YN +I+ L
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 391 CHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              G+  +AE ++ Q+ K+G V D   ++ LI G+ K  N + A ++++ M   G+  +A
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
           D Y  L+E Y +  +     + L SM+  G  P + ++  V+ +L     ++ A  V+  
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           + + G+  +L + + ++  L     +E+A+G +D M + G  P    +++L+      G 
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A  + D  L +  + +  +Y  ++D     G   +A+ +   ++++G   D    + 
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNV 775

Query: 627 LIAGLNQEGNTKQA---------------DILSRMIRGEMSRGSQKEKKQ 661
           L  G +   + +QA                + S ++RG   RG  +E ++
Sbjct: 776 LATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEK 825



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/596 (22%), Positives = 274/596 (45%), Gaps = 13/596 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ + L  +   E A  F   +   GL + D  T+  ++  L + G+L  A+ +L +M
Sbjct: 283 YNVMISGLCRSGAVEEAFGFKEEMVDYGL-SPDAFTYGALMNGLCKGGRLKEAKALLDEM 341

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G++ +  ++  L++ + K+G   E+  I + M   GV+ +   YD L + + + G+ 
Sbjct: 342 SCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQL 401

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +  N+M+  G  P   TY+ ++ G F     + A     +M++ GI  +  TY  M
Sbjct: 402 GRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIM 461

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING  +  +  EA  L  EM  + ++P    Y  +I G+        A    + M   +V
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+   Y +L+ GL   G++ E ++   ++ +R + P D   +  L+   CK+ +L  A 
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVP-DEFTYSGLIHGYCKTRNLEKAD 580

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +L+ M+   +   A  Y  L+E + K+  +++   +L  ++      +P + +      
Sbjct: 581 QLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD--KPDNHI------ 632

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  +I++L  +     A +   ++ K G V D   +++LI G  K  + + A  ++  M 
Sbjct: 633 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           + G+      Y  LI+ + R G+ + A+   DS++  G  P    + ++++   ++G + 
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDIT 752

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--SVPNFDSLLS 559
            A  + K M+++G+  +  +   +         +E+AL   + M   G   V  F +L+ 
Sbjct: 753 DAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVR 812

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
              ++G+     KLL   + R+ + +  + E V+     AGK   A+ +  ++ +K
Sbjct: 813 GFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQK 868



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 166/370 (44%), Gaps = 24/370 (6%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L  VG++  A      + K+G+  DE  +  LI  Y K   ++++ ++   M   G
Sbjct: 531 LIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG 590

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +  +Y  L +   +   +         ML  G +P  H Y +++     S  +E A 
Sbjct: 591 LKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 650

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +++  G+  D+  Y+++I+G  +   M++A  L  EM ++ +EP ++ Y  +I G+
Sbjct: 651 MVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 710

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                   A  +FD + +  + PN VTYTAL+ G C  G + +   + ++M++R I P  
Sbjct: 711 CRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAP-- 768

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH-----YGILIENFCKAEMYDRA 356
           ++    +L   C       AAD+ +A+         G+     +  L+  FCK       
Sbjct: 769 DAFVYNVLATGCSD-----AADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQET 823

Query: 357 IKLLDKLVEKEIILRPQSTLDM-----------EASS-YNPMIQHLCHNGQTGKAEIFFR 404
            KLL  ++++EI+   Q+  ++           EA   +  + Q       T +  + F 
Sbjct: 824 EKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFT 883

Query: 405 QLMKKGVLDP 414
            ++ KG++ P
Sbjct: 884 DMINKGLIPP 893



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/488 (19%), Positives = 204/488 (41%), Gaps = 65/488 (13%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            +I  L ++G+L  A  +L +M K G + D   +  L++ + +      + ++ + M+  
Sbjct: 390 NLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNS 449

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+  +  +Y  +   + + G    A     +M+SEG++P    Y  ++ G      +  A
Sbjct: 450 GILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLA 509

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
               E+M    +  D+  YN++I G +   +++EAE+ +A+++++ + P   +Y+ +I G
Sbjct: 510 CESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHG 569

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y      + A ++  +M +  +KPNA TYT LL G   +    +V  +L+ M+     P 
Sbjct: 570 YCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKP- 628

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           DN ++  ++    +S ++  A  VL  + +  +  +   Y  LI   CK    ++A+ LL
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLL 688

Query: 361 DKLVEKEI-------------------ILRPQSTLDM--------EASSYNPMIQHLCHN 393
           D++ ++ +                   I R ++  D            +Y  +I   C N
Sbjct: 689 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKN 748

Query: 394 GQTGKAEIFFRQLMKKGVLDPVAF------------------------------------ 417
           G    A   ++ ++ +G+  P AF                                    
Sbjct: 749 GDITDAFDLYKDMLDRGIA-PDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLF 807

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           + L+RG  K G      +++ +M  R +  +A     +I  + + G+  +A      + +
Sbjct: 808 STLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867

Query: 478 DGHSPASS 485
              S +S+
Sbjct: 868 KKASQSST 875


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 153/596 (25%), Positives = 276/596 (46%), Gaps = 51/596 (8%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           + +VL+++Y K G V++  ++  +MK LG+  S++  + L K +LR     +  +    M
Sbjct: 175 VLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFM 234

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR---- 208
              GI P  +TY+ ++  +     LE+A +  E+M+  G SL+VVTYNT+I G  R    
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294

Query: 209 -----FKK--------------------------MDEAEKLFAEMKEKNIEPTVISYTTM 237
                +KK                           D+A+ L  EM    + P V+ Y+T+
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE-RY 296
           I G++    AD+A +I  EM +  V+PN +TY  L+ GLC  G+M    ++L++M +  Y
Sbjct: 355 IDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +   D   +  ++    +  +   A  +L  M +  I      Y I+I   C+    +RA
Sbjct: 415 M--ADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERA 472

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
             LL++++     L+P + +      Y P+I   C  G    A    +++ ++ +  D  
Sbjct: 473 SGLLEQMIADG--LKPNAFV------YAPLISGYCREGSFSLACETLKKMTRENLTPDLY 524

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N+LI G S  G  D A E    M  +G   +   Y  LI  Y   G    A+  L  M
Sbjct: 525 CYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM 584

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +  G +P   ++  ++E  F+   ++  S  +KSM+EKG+  +  L   ++  L   GH+
Sbjct: 585 LNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHM 644

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           + A+  + ++ ++G VP+   + SL+S   +      AV LLD    +     ++ Y  +
Sbjct: 645 QAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNAL 704

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           +D    +    +A +I   I+ KG   +  +   LI G  + G+ + A D+ + M+
Sbjct: 705 IDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEML 760



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 153/640 (23%), Positives = 292/640 (45%), Gaps = 23/640 (3%)

Query: 25  LVYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN L G    A   E A  + + +E  GL   D  T+  +I  L + G+ + A+C+L 
Sbjct: 279 VTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLV-PDGFTYGAIINGLCKRGRPDQAKCLLD 337

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G+  +  ++  LI+ + ++G   E+ KI   M   GV+ +  +YD L + + + G
Sbjct: 338 EMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLG 397

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A R   +M   G      TYN+++ G       E A     +M+  GIS +V TY+
Sbjct: 398 RMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYS 457

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +ING  +  + + A  L  +M    ++P    Y  +I GY        A     +M   
Sbjct: 458 IIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRE 517

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           ++ P+   Y +L+ GL + GKM E  +   EM+E+   P D + +  L+     +G+L  
Sbjct: 518 NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFT-YGGLIHGYSMAGNLEK 576

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +L  M+   +      Y  ++E + K++  ++    L  ++EK ++  P + L    
Sbjct: 577 AEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLM--PDNRL---- 630

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
             Y  +I +L  +G    A      + K G V D + + +LI G  K  + + A  ++  
Sbjct: 631 --YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDE 688

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M ++G+      Y  LI+ + +  + + A+   +S+I  G  P    + ++++   + G 
Sbjct: 689 MAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGD 748

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS--VPNFDSL 557
           ++ A  +   M+ +GV  +  + + +       G +++AL   + M+  G   + +F++L
Sbjct: 749 IRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTL 808

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +    ++GK    VK L   + +D +  L + E ++  L  AGK   A++I  ++ +K  
Sbjct: 809 VHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNA 868

Query: 618 V---TDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
               TD  SS  L   +  +G     D++  MI+    +G
Sbjct: 869 SHRDTDHLSS--LFTDMINQGLVP-LDVIHNMIQSHCKQG 905



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/636 (20%), Positives = 271/636 (42%), Gaps = 52/636 (8%)

Query: 45  WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKK 104
           ++E AG+ + D  T+  +IE   +V  L  A+ ++ +M + G   +   +  LI    + 
Sbjct: 233 FMEGAGI-SPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
           G ++E+      M+  G+     +Y A+   + +RGR   AK   ++M   G+ P    Y
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVY 351

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           + ++ GF      + A +  ++M + G+  + +TY+ +I G  +  +M  A ++  +M +
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
                  ++Y  +I+G++     ++A  + +EM+   + PN  TY+ ++ GLC  G+   
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
              +L +M+   + P +  V+  L+   C+ G  + A + LK M R ++  +   Y  LI
Sbjct: 472 ASGLLEQMIADGLKP-NAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLI 530

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
                    D AI+  D+++EK    +P         +Y  +I      G   KAE    
Sbjct: 531 IGLSNVGKMDEAIEYYDEMLEKG--FQPNDF------TYGGLIHGYSMAGNLEKAEQLLH 582

Query: 405 QLMKKGVLDPVAF------------NNL-------------------------IRGHSKE 427
           Q++  G L+P  F            +NL                         I   S  
Sbjct: 583 QMLNSG-LNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSS 641

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G+  +A  ++ ++ + G+  D+  Y  LI  + +  +   A   LD M + G  P  S +
Sbjct: 642 GHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCY 701

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++++   +   +  A  +  S++ KG+  N      +++     G + +A+   + M+ 
Sbjct: 702 NALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT 761

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  P+   +  L +  S  G    A+ + +  + R   I ++S+  ++      GK   
Sbjct: 762 EGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQE 820

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
               L  +M+K  V    + + ++ GL + G   +A
Sbjct: 821 TVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEA 856



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/392 (22%), Positives = 167/392 (42%), Gaps = 14/392 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  +I  L  VGK++ A     +M +KG Q ++  +  LI  Y   G ++++ ++ 
Sbjct: 522 DLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLL 581

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G+  +   Y  + +   +             ML +G+ P    Y +++     S
Sbjct: 582 HQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSS 641

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             ++ A+     ++  G+  D + Y ++I+G+ +   M++A  L  EM +K IEP +  Y
Sbjct: 642 GHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCY 701

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I G+   +    A  IF+ +    + PN VTYT L+ G C AG + +   +  EM+ 
Sbjct: 702 NALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT 761

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D  V+  L      SG L  A  + + MI       +  +  L+  FCK     
Sbjct: 762 EGVAP-DAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIIS-SFNTLVHGFCKRGKLQ 819

Query: 355 RAIKLLDKLVEKEII------------LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
             +K L  +++K+I+            L     L    + +  + Q    +  T      
Sbjct: 820 ETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSL 879

Query: 403 FRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAF 434
           F  ++ +G++     +N+I+ H K+G  D A 
Sbjct: 880 FTDMINQGLVPLDVIHNMIQSHCKQGYLDKAL 911


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 243/526 (46%), Gaps = 28/526 (5%)

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYF-NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
           RSV  Y+ + + + R G    A   F  +M  +G+ PT  TYN ++ G   S +L   + 
Sbjct: 43  RSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGME 102

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            FE++  RG   DVVTYNT+I+   +   ++EA +L   M  +   P V++Y+ +I G  
Sbjct: 103 LFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLC 162

Query: 243 AVERADDALRIFDEM--KSFDVKPNAVTYTALLPGLCD---AGKMVEVQKVLREMVERYI 297
            V R D+A  +  EM  KS DV PN +TY + L GLC      +  E+ + LR+   R  
Sbjct: 163 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 222

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           P  D   F  L+   CK G  + A +    MI          Y  L+   CKA+  +RA 
Sbjct: 223 P--DTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAH 278

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            +++ +V+K +          +  +Y+ ++   C   +  +A      +  +G   + V 
Sbjct: 279 AMIESMVDKGVT--------PDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 330

Query: 417 FNNLIRGHSKEGNPDSAFEI-VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           FN++I G  K      AF+I +++  R  VP D   +  LI    + G    A    + M
Sbjct: 331 FNSIIDGLCKSDRSGEAFQIALQVYNRMLVP-DKVTFNILIAGACKAGNFEQASALFEEM 389

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +     P    F ++++ L + G+V+ A  ++  M   GV  N+     ++  L   G +
Sbjct: 390 VAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRI 449

Query: 536 EEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLD--FCLGRDCIIDLASYE 590
           EE    ++ M+ SG VP    + SL+  L    +T  A++L+      G D   D  +Y 
Sbjct: 450 EEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWD--PDTVTYN 507

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
            ++D L  +GKT  A ++L +++ KG   D  +      GL++ GN
Sbjct: 508 ILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGN 553



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 127/545 (23%), Positives = 239/545 (43%), Gaps = 49/545 (8%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRW-VERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           D+N+V   L  A  +  AL+ FR  + R G+      T+  +I  L +  +L     +  
Sbjct: 47  DYNIVLQSLCRAGETARALEIFRGEMARDGV-APTIVTYNTIINGLCKSNELGAGMELFE 105

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           ++ K+G   D   +  LI+S  K G ++E+ ++   M   G   +V +Y  L   + + G
Sbjct: 106 ELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVG 165

Query: 141 RYMMAKRYFNKMLSEGIE--PTRHTYNVMLWGFFL-----------------SLKLETAI 181
           R   A+    +M  +  +  P   TYN  L G                    SL++    
Sbjct: 166 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 225

Query: 182 RFF------------------EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
             F                  +DM + G   +VVTYN ++NG  +  KM+ A  +   M 
Sbjct: 226 VTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           +K + P VI+Y+ ++  +    R D+AL +   M S    PN VT+ +++ GLC + +  
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E  ++  ++  R + P D   F  L+   CK+G+   A+ + + M+  ++  +   +G L
Sbjct: 346 EAFQIALQVYNRMLVP-DKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGAL 404

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I+  CKA   + A  +LD +    +   P + +     +YN ++  LC +G+  +   F 
Sbjct: 405 IDGLCKAGQVEAARDILDLMGNLGV---PPNVV-----TYNVLVHGLCKSGRIEEPCEFL 456

Query: 404 RQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
            +++  G V + + + +L+    +    D A ++V  +   G   D   Y  L++   + 
Sbjct: 457 EEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKS 516

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G+   A T L+ M+  GH P S  F +    L   G +     +++ ++ KG+  +    
Sbjct: 517 GKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTC 576

Query: 523 AKILE 527
           + IL+
Sbjct: 577 SSILD 581



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 235/522 (45%), Gaps = 19/522 (3%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M + GV      +  +I    K   +   +++F+ + + G    V +Y+ L   + + G
Sbjct: 71  EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAG 130

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM--KSRGISLDVVT 198
               A+R    M S G  P   TY+V++ G     +++ A    ++M  KS  +  +++T
Sbjct: 131 DLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 190

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKN--IEPTVISYTTMIKGYVAVERADDALRIFDE 256
           YN+ ++G  +     EA +L   +++ +  + P  ++++T+I G     + D+A    D+
Sbjct: 191 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DD 248

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M +    PN VTY AL+ GLC A KM     ++  MV++ + P D   +  L+   CK+ 
Sbjct: 249 MIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTP-DVITYSVLVDAFCKAS 307

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            ++ A ++L  M           +  +I+  CK++    A ++  ++  +  +L P    
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNR--MLVPDKV- 364

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
                ++N +I   C  G   +A   F +++ K +  D + F  LI G  K G  ++A +
Sbjct: 365 -----TFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARD 419

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           I+ +MG  GVP +   Y  L+    + G   +    L+ M+  G  P S  + S++ +L 
Sbjct: 420 ILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALC 479

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
              R   A +++  +   G   +      +++ L   G  E+A+  ++ M+  G  P+  
Sbjct: 480 RASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSF 539

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
            F +    L   G     ++LL   L +  + D  +   +LD
Sbjct: 540 TFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 160/625 (25%), Positives = 286/625 (45%), Gaps = 26/625 (4%)

Query: 44  RWVERAGLFN---HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
           R VER+G  +    D     K+I  L R G+ + A  +L      G   D   +  L+  
Sbjct: 61  RLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAG 120

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
           Y + G +  + ++   M    V     +Y  L +++  RGR   A    + ML  G +P 
Sbjct: 121 YCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPN 177

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
             TY V+L     +   E A+   ++M+++G + ++VTYN +ING  R  ++D+A +L  
Sbjct: 178 VVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLN 237

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
            +     +P  +SYTT++KG  A +R DD   +F EM   +  PN VT+  L+   C  G
Sbjct: 238 RLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGG 297

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            +    +VL +M E      + ++   ++   CK G ++ A  +L  M       +   Y
Sbjct: 298 MVERAIQVLEQMTEHGCA-TNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISY 356

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             +++  C+AE +D A +LL+++V       P + +     ++N  I  LC  G   +A 
Sbjct: 357 TTVLKGLCRAERWDDAKELLNEMVRNNC---PPNEV-----TFNTFICILCQKGLIEQAI 408

Query: 401 IFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
           +   Q+ + G  +  V +N L+ G   +G+ DSA E+ + M  +    +   Y  L+   
Sbjct: 409 MLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTG- 464

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF-EDGRVQTASRVMKSMVEKGVKEN 518
           L   E  D    L + +  G  P + +  +V+ S F + G ++ A  +++ M+E G   N
Sbjct: 465 LCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPN 524

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           L     +L+ +      E+AL  +  ++  G  P+   F S++ +LS++ +   AV+L  
Sbjct: 525 LITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFH 584

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
                        Y K+L  L    +  NA      ++  G + +  +   LI GL  EG
Sbjct: 585 VVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 644

Query: 636 NTKQA-DILSRMI-RGEMSRGSQKE 658
             K+A D+LS +  RG +++   +E
Sbjct: 645 LLKEAQDLLSVLCSRGVLNKNLTEE 669



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/515 (21%), Positives = 211/515 (40%), Gaps = 52/515 (10%)

Query: 177 LETAIRFFEDMKS-RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           L  A+R  E   S  G + DV     +I    R  +  +A ++    +       V +Y 
Sbjct: 56  LAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYN 115

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           T++ GY      D A R+   M    V P+A TYT L+  LCD G++ +   +L +M+ R
Sbjct: 116 TLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR 172

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P +   +  LL   C++     A  VL  M           Y ++I   C+    D 
Sbjct: 173 GCQP-NVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 231

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A +LL++L        P      +  SY  +++ LC + +    E  F ++M+K  + + 
Sbjct: 232 ARELLNRL--------PSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 283

Query: 415 VAFNNLIR-----------------------------------GHSKEGNPDSAFEIVKI 439
           V F+ LIR                                      K+G  D AF+++  
Sbjct: 284 VTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLND 343

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           MG  G   D  +Y  +++   R     DAK  L+ M+ +   P    F + +  L + G 
Sbjct: 344 MGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGL 403

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
           ++ A  +++ M E G    +     ++    ++GH++ AL     M    +   + +LL+
Sbjct: 404 IEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLT 463

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            L    +   A +L+   L  DC  ++ ++  ++      G    A  ++ ++ME G   
Sbjct: 464 GLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTP 523

Query: 620 DWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           +  + + L+ G+ ++ +++ A     ++ G +S+G
Sbjct: 524 NLITYNTLLDGITKDCSSEDA---LELLHGLVSKG 555


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 270/568 (47%), Gaps = 32/568 (5%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           +I  L     +N + N L   K  E A+     +E +     +  T+  +++ L + G++
Sbjct: 3   RINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSC-EPNSFTYCILMDGLCKEGRV 61

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
             A  +L +M +KG++ D  ++  LI  +  KG +     +FD M + G+  +V  Y  L
Sbjct: 62  EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
                ++G +  A    + M   GI+P  +TY  M+ G     +   A+  F+ M  +G 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
               VTYN +ING  +   + +A K+F  M EK     V+SY T+I G     + D+A++
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 253 IFDEM--KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK--L 308
           +F  +      V+P+ +T+  ++ GLC  G++ +  ++   M+ER       ++F    L
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIER---GSFGNLFTCHIL 298

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +G   KSG ++ A ++ K + +L +   +  Y ++I+ FCK  M + A  L  ++     
Sbjct: 299 IGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM----- 353

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSK 426
                S L      YN ++  LC      +A   F++ MK+   +P  ++FN +I G  K
Sbjct: 354 ---KISGLSPTLFDYNTLMASLCKESSLEQARRLFQE-MKESNCEPDTISFNIMIDGTLK 409

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G+  SA E++  M + G+  DA  Y   I    + G+  +AK A DSMI  G +P + +
Sbjct: 410 AGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHV 469

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           + S+++    +  ++    +++ M + GV  +L++   IL  L    +  E L  ++L+ 
Sbjct: 470 YDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC---NSAEHLHVMELL- 525

Query: 547 QSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
                PNF S     S  G +I+  KLL
Sbjct: 526 -----PNFSS----ESSGGTSISCDKLL 544



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 207/459 (45%), Gaps = 21/459 (4%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           MK++ +   + SY+ +   + +  R   A     +M     EP   TY +++ G     +
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +E A+R   +MK +G+ +DVV Y+T+I+G+     +D  + LF EM EK I P V+ Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G+       +A  +   M    ++P+  TYT ++ GLC  G+  +   +   M E+ 
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
             P     +  L+   CK G +  A  + + M+      E   Y  LI   C     D A
Sbjct: 181 EEPS-TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEA 239

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA 416
           +KL   L+E    + P      +  ++N +IQ LC  G+  KA   +  ++++G     +
Sbjct: 240 MKLFSSLLEDGNYVEP------DVITFNTVIQGLCKEGRLDKAVEIYDTMIERG-----S 288

Query: 417 FNNLIRGH------SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
           F NL   H       K G  D A E+ K + + G+   +  Y  +I+ + +      AK 
Sbjct: 289 FGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKG 348

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
               M   G SP    + ++M SL ++  ++ A R+ + M E   + +      +++  L
Sbjct: 349 LFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTL 408

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
             G +  A   ++ M Q G  P+   + S ++ LS+ G+
Sbjct: 409 KAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQ 447



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 6/176 (3%)

Query: 471 ALDSMIE-DGHS--PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+D ++E +G S  P S  +  +M+ L ++GRV+ A R++  M  KG++ ++ + + ++ 
Sbjct: 29  AVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLIS 88

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
               +G ++      D M++ G  PN   +  L++   +KG    A  +L     R    
Sbjct: 89  GFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQP 148

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D+ +Y  ++  L   G+   A  +   + EKG      + + LI GL +EG    A
Sbjct: 149 DVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDA 204


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 244/542 (45%), Gaps = 18/542 (3%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  +  ++  + + +  RGR   A    ++M  +G  P    Y+V+L     S     ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R  E M ++G +LD    N ++N       +DEA  L  ++     E  ++SY  ++KG 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +R  D   + DEM   D  PN VT+  L+  LC  G    V +VL +M E    P D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP-D 285

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             ++  ++   CK GHL  A ++L  M    +      Y  +++  C AE +  A +LL 
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           ++ +K+  L        +  ++N ++   C NG   +      Q++  G + D + +  +
Sbjct: 346 EMFQKDCPL--------DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  KEG  D A  ++K M   G   +  +Y  +++     G   DA+  +  MI+ G 
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    F +++  L + G V+ A  ++K M+  G   +L   + +++ L   G  EEAL 
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            +++M+  G  PN   + S+   LS +G+    +++ D         D   Y  V+ +L 
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMSRGSQ 656
              +T  A      ++  G + +  +   LI GL  EG  K+A ++LS +     SRG+ 
Sbjct: 578 KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC----SRGAL 633

Query: 657 KE 658
           ++
Sbjct: 634 RK 635



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 242/522 (46%), Gaps = 13/522 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L   G++  A  +L +M  KG      M+ V++E+  + G  + SV++ + M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G      + + +   I  +G    A     K+   G E    +YN +L G  ++ + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                  ++M     + ++VT+NT+I    R    +   ++ A+M E    P +  Y T+
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G       + A  I + M S+ +KPN V Y  +L GLC A +  E +++L EM ++  
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D+  F  L+   C++G ++   ++L+ M+      +   Y  +I  FCK  + D A+
Sbjct: 353 -PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            LL  +       +P +       SY  +++ LC  G+   AE    Q++++G   +PV 
Sbjct: 412 MLLKSM--SSCGCKPNTV------SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN LI    K+G  + A E++K M   G   D  +Y  +I+   + G+  +A   L+ M+
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G SP + ++ S+  +L  +GRV    ++  ++ +  ++ +  L   ++ +L  R   +
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
            A+     M+ +G +PN   +  L+  L+ +G    A +LL 
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 176/384 (45%), Gaps = 33/384 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI    + G+ +   ++   M + G    ++ Y  +   I + G   +A    N+M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S G++P    YN +L G   + + + A     +M  +   LD VT+N +++ + +   +D
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
              +L  +M      P VI+YTT+I G+      D+A+ +   M S   KPN V+YT +L
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC AG+ V+ ++++ +M+++  PP +   F  L+   CK G +  A ++LK M+    
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPP-NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ-------------------- 373
             +   Y  +I+   KA   + A++LL+ +V K I   P                     
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI--SPNTIIYSSIACALSREGRVNKV 550

Query: 374 ---------STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
                    +T+  +A  YN +I  LC   +T +A  FF  ++  G + +   +  LI+G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPR 447
            + EG    A E++  +  RG  R
Sbjct: 611 LASEGLAKEAQELLSELCSRGALR 634



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 199/483 (41%), Gaps = 51/483 (10%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VV YN M+ GY R  ++  A +L A +    + P   ++  +++G     R  DAL + D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM      P    Y  +L   C +G      +VL  M  +     D      +L   C+ 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGC-TLDTGNCNLVLNAICEQ 194

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G ++ A  +L+ +       +   Y  +++  C A+ +    +L+D++V  +    P   
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC--APNIV 252

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
                 ++N +I +LC NG   +      Q+ + G    +  +  +I G  KEG+ + A 
Sbjct: 253 ------TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 435 EIVKIMGRRGVPRDADAY------IC----------LIESYLRKGEPADAKT-------- 470
           EI+  M   G+  +   Y      +C          L+    +K  P D  T        
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 471 -----------ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
                       L+ M+  G  P    + +V+    ++G +  A  ++KSM   G K N 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                +L+ L   G   +A   +  M+Q G  PN   F++L++ L +KG    A++LL  
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
            L   C  DL SY  V+D L  AGKT  A  +L  ++ KG   +      +   L++EG 
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 637 TKQ 639
             +
Sbjct: 547 VNK 549



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/390 (21%), Positives = 161/390 (41%), Gaps = 44/390 (11%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  L R G       +L  M + G   D  M+  +I+   K+G ++ + +I + M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRY---------------FN------------ 150
              G++ +V  Y+ + K +    R+  A+                 FN            
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 151 --------KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                   +MLS G  P   TY  ++ GF     ++ A+   + M S G   + V+Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           + G     +  +AE+L ++M ++   P  +++ T+I         + A+ +  +M     
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+ ++Y+ ++ GL  AGK  E  ++L  MV + I P +  ++  +     + G +N   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP-NTIIYSSIACALSREGRVNKVI 551

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   +   +I ++A  Y  +I + CK    DRAI     +V    +  P        S+
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM--PNE------ST 603

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           Y  +I+ L   G   +A+    +L  +G L
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 124/265 (46%), Gaps = 9/265 (3%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           +I+ LC  G+T +A            +  VA+N ++ G+ + G   +A  +   +    V
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGV--VAYNAMVAGYCRAGQLAAARRLAAAVP---V 107

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
           P +A  +  ++     +G  ADA   LD M   G +P   ++  ++E+    G  + + R
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG---RIDLMMQSGSVPNFDSLLSVLS 562
           V+++M  KG   +      +L A+  +G V+EA+G   ++        + +++++L  L 
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
              +     +L+D  +  DC  ++ ++  ++  L   G     + +L ++ E G   D +
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 623 SSDKLIAGLNQEGNTKQAD-ILSRM 646
               +I G+ +EG+ + A+ IL+RM
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRM 312



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 91/439 (20%), Positives = 179/439 (40%), Gaps = 64/439 (14%)

Query: 271 ALLPGLCDAGKMVEVQK------------VLREMVERY-----------------IPPKD 301
           AL+  LC AG+  E  +                MV  Y                 +PP  
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + F  + G+ C  G +  A +VL  M           Y +++E  C++  +  ++++L+
Sbjct: 112 YTFFPVVRGL-CTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLE 170

Query: 362 KLVEKEI-------------------------ILRPQSTLDMEAS--SYNPMIQHLCHNG 394
            +  K                           +LR  +    EA   SYN +++ LC   
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230

Query: 395 QTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           + G  E    ++++     + V FN LI    + G  +   E++  M   G   D   Y 
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            +I+   ++G    A   L+ M   G  P    + +V++ L    R + A  ++  M +K
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 514 GVKENLDLVAKIL-EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
               + D+   IL +     G V+  +  ++ M+  G +P+   + ++++   ++G    
Sbjct: 351 DCPLD-DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           AV LL       C  +  SY  VL  L +AG+ ++A  ++ +++++G   +  + + LI 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 630 GLNQEGNTKQA-DILSRMI 647
            L ++G  +QA ++L +M+
Sbjct: 470 FLCKKGLVEQAIELLKQML 488


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 244/542 (45%), Gaps = 18/542 (3%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  +  ++  + + +  RGR   A    ++M  +G  P    Y+V+L     S     ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R  E M ++G +LD    N ++N       +DEA  L  ++     E  ++SY  ++KG 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +R  D   + DEM   D  PN VT+  L+  LC  G    V +VL +M E    P D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP-D 285

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             ++  ++   CK GHL  A ++L  M    +      Y  +++  C AE +  A +LL 
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           ++ +K+  L        +  ++N ++   C NG   +      Q++  G + D + +  +
Sbjct: 346 EMFQKDCPL--------DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  KEG  D A  ++K M   G   +  +Y  +++     G   DA+  +  MI+ G 
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    F +++  L + G V+ A  ++K M+  G   +L   + +++ L   G  EEAL 
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            +++M+  G  PN   + S+   LS +G+    +++ D         D   Y  V+ +L 
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMSRGSQ 656
              +T  A      ++  G + +  +   LI GL  EG  K+A ++LS +     SRG+ 
Sbjct: 578 KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC----SRGAL 633

Query: 657 KE 658
           ++
Sbjct: 634 RK 635



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 242/522 (46%), Gaps = 13/522 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L   G++  A  +L +M  KG      M+ V++E+  + G  + SV++ + M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G      + + +   I  +G    A     K+   G E    +YN +L G  ++ + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                  ++M     + ++VT+NT+I    R    +   ++ A+M E    P +  Y T+
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G       + A  I + M S+ +KPN V Y  +L GLC A +  E +++L EM ++  
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D+  F  L+   C++G ++   ++L+ M+      +   Y  +I  FCK  + D A+
Sbjct: 353 -PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            LL  +       +P +       SY  +++ LC  G+   AE    Q++++G   +PV 
Sbjct: 412 MLLKSM--SSCGCKPNTV------SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN LI    K+G  + A E++K M   G   D  +Y  +I+   + G+  +A   L+ M+
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G SP + ++ S+  +L  +GRV    ++  ++ +  ++ +  L   ++ +L  R   +
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
            A+     M+ +G +PN   +  L+  L+ +G    A +LL 
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 176/384 (45%), Gaps = 33/384 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI    + G+ +   ++   M + G    ++ Y  +   I + G   +A    N+M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S G++P    YN +L G   + + + A     +M  +   LD VT+N +++ + +   +D
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
              +L  +M      P VI+YTT+I G+      D+A+ +   M S   KPN V+YT +L
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC AG+ V+ ++++ +M+++  PP +   F  L+   CK G +  A ++LK M+    
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPP-NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ-------------------- 373
             +   Y  +I+   KA   + A++LL+ +V K I   P                     
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI--SPNTIIYSSIACALSREGRVNKV 550

Query: 374 ---------STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
                    +T+  +A  YN +I  LC   +T +A  FF  ++  G + +   +  LI+G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPR 447
            + EG    A E++  +  RG  R
Sbjct: 611 LASEGLAKEAQELLSELCSRGALR 634



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 199/483 (41%), Gaps = 51/483 (10%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VV YN M+ GY R  ++  A +L A +    + P   ++  +++G     R  DAL + D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM      P    Y  +L   C +G      +VL  M  +     D      +L   C+ 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGC-TLDTGNCNLVLNAICEQ 194

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G ++ A  +L+ +       +   Y  +++  C A+ +    +L+D++V  +    P   
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDC--APNIV 252

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
                 ++N +I +LC NG   +      Q+ + G    +  +  +I G  KEG+ + A 
Sbjct: 253 ------TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 435 EIVKIMGRRGVPRDADAY------IC----------LIESYLRKGEPADAKT-------- 470
           EI+  M   G+  +   Y      +C          L+    +K  P D  T        
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 471 -----------ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
                       L+ M+  G  P    + +V+    ++G +  A  ++KSM   G K N 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                +L+ L   G   +A   +  M+Q G  PN   F++L++ L +KG    A++LL  
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
            L   C  DL SY  V+D L  AGKT  A  +L  ++ KG   +      +   L++EG 
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 637 TKQ 639
             +
Sbjct: 547 VNK 549



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/390 (21%), Positives = 161/390 (41%), Gaps = 44/390 (11%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  L R G       +L  M + G   D  M+  +I+   K+G ++ + +I + M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRY---------------FN------------ 150
              G++ +V  Y+ + K +    R+  A+                 FN            
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 151 --------KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                   +MLS G  P   TY  ++ GF     ++ A+   + M S G   + V+Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           + G     +  +AE+L ++M ++   P  +++ T+I         + A+ +  +M     
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+ ++Y+ ++ GL  AGK  E  ++L  MV + I P +  ++  +     + G +N   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP-NTIIYSSIACALSREGRVNKVI 551

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   +   +I ++A  Y  +I + CK    DRAI     +V    +  P        S+
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM--PNE------ST 603

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           Y  +I+ L   G   +A+    +L  +G L
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 124/265 (46%), Gaps = 9/265 (3%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           +I+ LC  G+T +A            +  VA+N ++ G+ + G   +A  +   +    V
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGV--VAYNAMVAGYCRAGQLAAARRLAAAVP---V 107

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
           P +A  +  ++     +G  ADA   LD M   G +P   ++  ++E+    G  + + R
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG---RIDLMMQSGSVPNFDSLLSVLS 562
           V+++M  KG   +      +L A+  +G V+EA+G   ++        + +++++L  L 
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
              +     +L+D  +  DC  ++ ++  ++  L   G     + +L ++ E G   D +
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 623 SSDKLIAGLNQEGNTKQAD-ILSRM 646
               +I G+ +EG+ + A+ IL+RM
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRM 312



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 91/439 (20%), Positives = 179/439 (40%), Gaps = 64/439 (14%)

Query: 271 ALLPGLCDAGKMVEVQK------------VLREMVERY-----------------IPPKD 301
           AL+  LC AG+  E  +                MV  Y                 +PP  
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + F  + G+ C  G +  A +VL  M           Y +++E  C++  +  ++++L+
Sbjct: 112 YTFFPVVRGL-CTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLE 170

Query: 362 KLVEKEI-------------------------ILRPQSTLDMEAS--SYNPMIQHLCHNG 394
            +  K                           +LR  +    EA   SYN +++ LC   
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230

Query: 395 QTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           + G  E    ++++     + V FN LI    + G  +   E++  M   G   D   Y 
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            +I+   ++G    A   L+ M   G  P    + +V++ L    R + A  ++  M +K
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 514 GVKENLDLVAKIL-EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
               + D+   IL +     G V+  +  ++ M+  G +P+   + ++++   ++G    
Sbjct: 351 DCPLD-DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           AV LL       C  +  SY  VL  L +AG+ ++A  ++ +++++G   +  + + LI 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 630 GLNQEGNTKQA-DILSRMI 647
            L ++G  +QA ++L +M+
Sbjct: 470 FLCKKGLVEQAIELLKQML 488


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 248/518 (47%), Gaps = 13/518 (2%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K++  + ++ K +    +   M   G+  +   + +L+  + ++  +  ++ +   M +L
Sbjct: 86  KLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKL 145

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G E  + +  +L        R   A    ++M+  G +P   T+N ++ G FL  K   A
Sbjct: 146 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEA 205

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +   + M +RG   D+ TY T++NG  +   +D A  L  +M++  IE  V+ Y T+I G
Sbjct: 206 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDG 265

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +  DDA  +F++M++  +KP+  TY +L+  LC+ G+  +  ++L +M+ER I P 
Sbjct: 266 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINP- 324

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   F  L+    K G L  A  +   MI+ SI      Y  LI  FC  +  D A ++ 
Sbjct: 325 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
             +V K+ +  P      +  +YN +I+  C   +  +    FR++ ++G++ + V +N 
Sbjct: 385 TLMVSKDCL--P------DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 436

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI+G  + G+ D A +I K M   GVP D   Y  L++   + G+   A    + + +  
Sbjct: 437 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 496

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  ++E + + G+V+    +  S+  KGVK N+ +   ++     +G  EEA 
Sbjct: 497 MEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 556

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
                M + G++P+   +++L+      G   A+ +L+
Sbjct: 557 ALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELI 594



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 215/442 (48%), Gaps = 13/442 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + L++ +    K SE      R V R      D  T+  ++  L + G ++ A  +L  M
Sbjct: 190 NTLIHGLFLHNKASEAVALIDRMVARGC--QPDLFTYGTVVNGLCKRGDIDLALSLLKKM 247

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K  ++ +  ++  +I+   K   + ++  +F+ M+  G++  V +Y++L   +   GR+
Sbjct: 248 EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R  + M+   I P   T+N ++  F    KL  A + F++M  R I  ++VTYN++
Sbjct: 308 SDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 367

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING+    ++DEA+++F  M  K+  P V++Y T+IKG+   +R ++ + +F EM    +
Sbjct: 368 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 427

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             N VTY  L+ GL  AG     QK+ ++MV   +PP D   +  LL   CK G L  A 
Sbjct: 428 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-DIITYSILLDGLCKYGKLEKAL 486

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V + + +  +      Y I+IE  CKA   +    L   L  K +  +P   +      
Sbjct: 487 VVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV--KPNVII------ 538

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  MI   C  G   +A+  FR++ + G L D   +N LIR   ++G+  ++ E++K M 
Sbjct: 539 YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMR 598

Query: 442 RRGVPRDADAYICLIESYLRKG 463
             G   DA   I ++ + L  G
Sbjct: 599 SCGFVGDAST-ISMVINMLHDG 619



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 233/481 (48%), Gaps = 13/481 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           +L+    HG + SE      + VE    +  D  T   +I  L    K + A  ++  M 
Sbjct: 156 SLLNGYCHGKRISEAVALVDQMVEMG--YKPDTVTFNTLIHGLFLHNKASEAVALIDRMV 213

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            +G Q D   +  ++    K+G +  ++ +   M++  +E +V  Y+ +   + +     
Sbjct: 214 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMD 273

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   FNKM ++GI+P   TYN ++       +   A R   DM  R I+ +VVT+N++I
Sbjct: 274 DAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLI 333

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           + + +  K+ EAEKLF EM +++I+P +++Y ++I G+   +R D+A +IF  M S D  
Sbjct: 334 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 393

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ VTY  L+ G C A ++ E  ++ REM +R +   +   +  L+    ++G  + A  
Sbjct: 394 PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAGDCDMAQK 452

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + K M+   +P +   Y IL++  CK    ++A+ + + L         +S ++    +Y
Sbjct: 453 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL--------QKSKMEPNIYTY 504

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N MI+ +C  G+       F  L  KGV  + + +  +I G  ++G  + A  + + M  
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 564

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G   D+  Y  LI + LR G+ A +   +  M   G    +S    V+ ++  DGR++ 
Sbjct: 565 DGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI-NMLHDGRLEK 623

Query: 503 A 503
           +
Sbjct: 624 S 624



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/514 (23%), Positives = 234/514 (45%), Gaps = 32/514 (6%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           H+  T+  ++    R  +L  A  +L  M K G + D      L+  Y     + E+V +
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
            D M ++G +    +++ L   +    +   A    ++M++ G +P   TY  ++ G   
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
              ++ A+   + M+   I  +VV YNT+I+G  ++K MD+A  LF +M+ K I+P V +
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y ++I       R  DA R+  +M    + PN VT+ +L+      GK++E +K+  EM+
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +R I P +   +  L+   C    L+ A  +   M+      +   Y  LI+ FCKA+  
Sbjct: 354 QRSIDP-NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412

Query: 354 DRAIKLLDKLVEKEII------------LRPQSTLDM---------------EASSYNPM 386
           +  ++L  ++ ++ ++            L      DM               +  +Y+ +
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 472

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +  LC  G+  KA + F + ++K  ++P    +N +I G  K G  +  +++   +  +G
Sbjct: 473 LDGLCKYGKLEKALVVF-EYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V  +   Y  +I  + RKG   +A      M EDG  P S  + +++ +   DG    ++
Sbjct: 532 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 591

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            ++K M   G   +   ++ ++  +L  G +E++
Sbjct: 592 ELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 624



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 117/541 (21%), Positives = 236/541 (43%), Gaps = 44/541 (8%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + ++V +F  M +     S+  +  L   I +  ++ +      +M + GI    +TY++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           +L  F    +L  A+     M   G   D+VT ++++NGY   K++ EA  L  +M E  
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P  +++ T+I G     +A +A+ + D M +   +P+  TY  ++ GLC  G +    
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +L++M E+     +  ++  ++   CK  H++ A D+   M    I  +   Y  LI  
Sbjct: 242 SLLKKM-EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C    +  A +LL  ++E++I        +    ++N +I      G+  +AE  F ++
Sbjct: 301 LCNYGRWSDASRLLSDMIERKI--------NPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352

Query: 407 MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +++ + DP  V +N+LI G       D A +I  +M  +    D   Y  LI+ + +   
Sbjct: 353 IQRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +       M + G    +  + ++++ LF+ G    A ++ K MV  GV  ++   + 
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           +L+ L   G +E+AL   + + +S   PN                               
Sbjct: 472 LLDGLCKYGKLEKALVVFEYLQKSKMEPN------------------------------- 500

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
            + +Y  +++ +  AGK  + + +   +  KG   +      +I+G  ++G  ++AD L 
Sbjct: 501 -IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 559

Query: 645 R 645
           R
Sbjct: 560 R 560


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 168/716 (23%), Positives = 305/716 (42%), Gaps = 121/716 (16%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
             PQ   NL+   L    +S   L+F  W      F+   +     + IL R      A+
Sbjct: 45  FTPQASSNLL---LKSQFDSSLVLKFLDWARSQQFFSF--QCKCLALHILTRYKLYKTAQ 99

Query: 77  CILLDMPKKGV-QWDEDMFEVLIESY-----------------GKKGIVQESVKIFDIMK 118
            +  ++    V +  ED+F+ L  SY                  +  ++ +++ I ++ K
Sbjct: 100 SLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAK 159

Query: 119 QLGVERSVKSYDALFKLILRRGRYM-MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
             G    V SY+A+   ++R  + + +A+  F +M+  G+ P  +TYN+++ GF  +  L
Sbjct: 160 SYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNL 219

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY--- 234
           E  + FF +M+  G   +VVTYNT+I+ Y + +K+ EA KL   M  K + P +ISY   
Sbjct: 220 EMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVV 279

Query: 235 --------------------------------TTMIKGYVAVERADDALRIFDEMKSFDV 262
                                            T+I GY  V     AL +  EM    +
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGL 339

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-----------FMK---- 307
            PN VTYT L+  +C AG +    + L +M +R + P   +            F+K    
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399

Query: 308 -------------------LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                              L+   C  G +  A+ +L+ MI      +   Y  +I  FC
Sbjct: 400 IMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC 459

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           + +  ++A +L  ++V K I          + ++Y+ +IQ LC   + G+    F++++ 
Sbjct: 460 RNQELEKAFQLKVEMVAKGI--------SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLS 511

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G+  D V + +LI  +  EG+ D A  +   M ++G   D   Y  LI  + ++    +
Sbjct: 512 LGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKE 571

Query: 468 AKTALDSMIEDGHSPASSLFRS---------------VMESLFEDGRVQTASRVMKSMVE 512
           AK  L  ++ +   P    + +               +M+     G +  A RV++SM++
Sbjct: 572 AKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQ 631

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV---LSEKGKTIA 569
           KG K N ++   I+      G++E+A      M+ SG  P+  +++++   L  +GK + 
Sbjct: 632 KGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE 691

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
             +LLD+ L + C I  A+  KVL  + +    ++A   + K M   G+  + S++
Sbjct: 692 LNQLLDYTL-KSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSSAN 746



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 195/470 (41%), Gaps = 51/470 (10%)

Query: 213 DEAEKLFAEMKEK--NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +  E LF  +K      + +   +  ++K    V   + AL I +  KS+   P  ++Y 
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171

Query: 271 ALLPGLCDAGKMVEV-QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           A+L  +    + V++ + + +EMVE  + P   +  + + G  C +G+L         M 
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGF-CTAGNLEMGLXFFGEME 230

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           R         Y  +I+ +CK      A KLL  +  K         L+    SYN +I  
Sbjct: 231 RNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK--------GLNPNLISYNVVING 282

Query: 390 LCHNGQTGK-AEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC  GQ  + +EI      ++ V D V FN LI G+   GN   A  +   M + G+  +
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  LI S  + G    A   LD M + G  P    + ++++   + G ++ A ++MK
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS------ 562
            MVE G    +     ++    + G +E+A G +  M++ G +P+  S  +++S      
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 563 -------------EKGKT--IAAVKLL--DFC----LGRDCII-----------DLASYE 590
                         KG +  +A    L    C    LG  C +           D  +Y 
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +++A    G    A  +  ++++KG   D  + + LI G N++  TK+A
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA 572



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 5/179 (2%)

Query: 479 GHSPASSLFRSVMESLFEDGR-VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           G  P    + ++++++    + V+ A  + K MVE GV  N+     ++      G++E 
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
            L     M ++G +PN   +++++    +  K   A KLL     +    +L SY  V++
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL-SRMIRGEMS 652
            L   G+      IL ++ ++  V D  + + LI G    GN  QA +L + M++  +S
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 161/589 (27%), Positives = 269/589 (45%), Gaps = 29/589 (4%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K G   +  ++  L+ S+ K+ +  E+ K+ + M + G+   V ++++    + R G+  
Sbjct: 212 KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVF 271

Query: 144 MAKRYFNKMLSEG----IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
            A R F  M  +G     +P   T+N+ML GF     +E A    E MK  G  + + +Y
Sbjct: 272 EASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESY 331

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT + G  R  K+ E   +  EM E  IEP + SY  ++ G        DA R+ D M S
Sbjct: 332 NTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVS 391

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             V P+ VTYT LL G C  GK+ E + +L EM+ +   P +      LL    K G  +
Sbjct: 392 NGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHP-NTYTCNTLLNSLWKEGRKS 450

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCK-----------AEMYDRAIKLLDK------ 362
            A ++L+ M   S   +     I++   C+           +EM+      L K      
Sbjct: 451 EAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAG 510

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
           LV     +   ST   +  +Y  +I  LC  G+  +A+  F ++M K +  D V ++  +
Sbjct: 511 LVNS---IHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFV 567

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
               K+G   SA  ++K M R G  +    Y  LI     KG+  +    +D M E G  
Sbjct: 568 LNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIH 627

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV-KENLDLVAKILEALLMRGHVEEALG 540
           P    + +++  L E G+ + A+ ++  M++KGV   N+     +++A    G  + A  
Sbjct: 628 PDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACE 687

Query: 541 RIDLMMQ-SGSVPNFDSLL-SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
             D+ +   G      SL+ + L   GK   A +L +  L R  +     YE ++D L  
Sbjct: 688 LFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCK 747

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            G+  +A+ +L K+++KG   D  S   +I GL++ GN +QAD L R++
Sbjct: 748 DGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIM 796



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 240/549 (43%), Gaps = 83/549 (15%)

Query: 63  IEILGRVGKLNHARCILLDM--------PKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           I  L R GK+  A  I  DM        PK  V      F ++++ + ++G+++E+  + 
Sbjct: 261 ISALCRAGKVFEASRIFRDMQMDGELGLPKPNVV----TFNLMLKGFCQEGMMEEARSLV 316

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + MK+ G   S++SY+     +LR G+ +  +   ++M+  GIEP  ++YN+++ G   +
Sbjct: 317 ETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRN 376

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A R  + M S G+  D VTY T+++GY    K+ EA+ +  EM  K   P   + 
Sbjct: 377 HMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTC 436

Query: 235 TTMIKGYVAVERADDALRIFDEM--KSFDV------------------------------ 262
            T++       R  +A  +  +M  KS+ +                              
Sbjct: 437 NTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWT 496

Query: 263 -------KPNAV------------------TYTALLPGLCDAGKMVEVQKVLREMVERYI 297
                  K N V                  TYT L+ GLC  GK+ E +K   EM+ + +
Sbjct: 497 DGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNL 556

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D+  +   +   CK G +++A  VLK M R         Y  LI             
Sbjct: 557 HP-DSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMY 615

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--V 415
            L+D++ E+ I   P      +  +YN MI  LC  G+T  A     +++ KGV+ P   
Sbjct: 616 GLMDEMRERGI--HP------DICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVS 667

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           +F  LI+   K G+   A E+  +       ++A  Y  +    L  G+ +DAK   ++ 
Sbjct: 668 SFKILIKAFCKSGDFKVACELFDVALSVCGHKEA-LYSLMFNELLAGGKLSDAKELFEAS 726

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +E      + ++  +++ L +DGR+  A  +++ +++KG   +      +++ L  RG+ 
Sbjct: 727 LERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNK 786

Query: 536 EEA--LGRI 542
           ++A  LGRI
Sbjct: 787 QQADELGRI 795



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/484 (22%), Positives = 210/484 (43%), Gaps = 43/484 (8%)

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            + DM   G++ +  T+N +I        +D A +LF +M EK  +P   +   +++G+ 
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              R   AL   D     +V  N V Y  L+   C      E +K++  M E+ + P D 
Sbjct: 198 RAGRTKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLP-DV 254

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMI---RLSIP-TEAGHYGILIENFCKAEMYDRAIK 358
             F   +   C++G +  A+ + + M     L +P      + ++++ FC+  M + A  
Sbjct: 255 VTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARS 314

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AF 417
           L+      E + +  + + +E  SYN  +  L  NG+  +      ++++ G+   + ++
Sbjct: 315 LV------ETMKKGGNFVSLE--SYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSY 366

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N ++ G  +      A  ++ +M   GV  D   Y  L+  Y  KG+  +AK  L+ MI 
Sbjct: 367 NIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIR 426

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G  P +    +++ SL+++GR   A  +++ M EK  + +      ++  L   G +E+
Sbjct: 427 KGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEK 486

Query: 538 ALGRIDLMMQSGS----------------------VPN---FDSLLSVLSEKGKTIAAVK 572
           A   +  M   G+                      VP+   + +L++ L + GK   A K
Sbjct: 487 ASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKK 546

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGL 631
                + ++   D  +Y+  +      GK  +A  +L K ME+ G +   ++ + LI GL
Sbjct: 547 KFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVL-KDMERNGCSKTLQTYNSLILGL 605

Query: 632 NQEG 635
             +G
Sbjct: 606 GSKG 609



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 193/458 (42%), Gaps = 61/458 (13%)

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           L+ +M +  + P   ++  +I+        D A  +FD+M     +PN  T   L+ G C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
            AG+     K   E V+  +    N V                                 
Sbjct: 198 RAGR----TKQALEFVDGKMGGNVNRVV-------------------------------- 221

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y  L+ +FCK +M D A KL++++ EK ++  P      +  ++N  I  LC  G+  
Sbjct: 222 --YNTLVSSFCKQDMNDEAEKLVERMTEKGLL--P------DVVTFNSRISALCRAGKVF 271

Query: 398 KAEIFFRQLMKKGVL-----DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           +A   FR +   G L     + V FN +++G  +EG  + A  +V+ M + G     ++Y
Sbjct: 272 EASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESY 331

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
              +   LR G+  + ++ LD M+E+G  P    +  VM+ L  +  +  A R+M  MV 
Sbjct: 332 NTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVS 391

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            GV  +      +L     +G V EA   ++ M++ G  PN    ++LL+ L ++G+   
Sbjct: 392 NGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSE 451

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A ++L     +   +D  +   V++ L   G+   A  ++ ++   G  T+    +  +A
Sbjct: 452 AEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDG--TNSLGKENPVA 509

Query: 630 GL-----NQEGNTKQADILSRMIRGEMSRGSQKEKKQK 662
           GL     N   N       + +I G    G  +E K+K
Sbjct: 510 GLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKK 547



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 9/190 (4%)

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
           S L++  P    +    MI+ G +P +  F  +++SL E   +  A  +   M EKG + 
Sbjct: 125 SSLQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQP 184

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--FDSLLSVLSEKGKTIAAVKLLD 575
           N   V  ++      G  ++AL  +D  M  G+V    +++L+S   ++     A KL++
Sbjct: 185 NKFTVGILVRGFCRAGRTKQALEFVDGKM-GGNVNRVVYNTLVSSFCKQDMNDEAEKLVE 243

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG-----VTDWKSSDKLIAG 630
               +  + D+ ++   + AL  AGK   A S +F+ M+  G       +  + + ++ G
Sbjct: 244 RMTEKGLLPDVVTFNSRISALCRAGKVFEA-SRIFRDMQMDGELGLPKPNVVTFNLMLKG 302

Query: 631 LNQEGNTKQA 640
             QEG  ++A
Sbjct: 303 FCQEGMMEEA 312


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 259/555 (46%), Gaps = 17/555 (3%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L R  ++N A+    +M K G++ D +    LI+ + ++G + E ++I D+M   G+  +
Sbjct: 20  LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 79

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           + +Y+ L   + + G+   A      M++ G +P   T+ +++ G+     +  A+   +
Sbjct: 80  LITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLD 139

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+ R +    V+Y  MING    K +  A KL  +M    ++P V+ Y+T+I GY +  
Sbjct: 140 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEG 199

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           R ++A R+ D M    V P+   Y A++  L  AGKM E    L E+  R + P   +  
Sbjct: 200 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 259

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             +LG   K+G +  AA     M+   +      Y +LI    KA            L+E
Sbjct: 260 AFILGYS-KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA----------GNLME 308

Query: 366 KEIILRPQSTLDM--EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
              I R    L +  +  + +  I  L  NG+  +A   F +L +KG++ D   +++LI 
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  K+G  + AFE+   M  +G+  +   Y  L++   + G+   A+   D M E G  P
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            S  + ++++   +   V  A  +   M  KGV+ +  +   ++      G +E+A+   
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 488

Query: 543 DLMMQSG--SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
             M+Q G  +  +F++L+    +  K   A +L    + +  + D  +Y  V+D    AG
Sbjct: 489 REMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 548

Query: 601 KTLNAYSILFKIMEK 615
           K   A ++LFK M++
Sbjct: 549 KMEEA-NLLFKEMQE 562



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 231/496 (46%), Gaps = 30/496 (6%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N + + L  A   E A  +   ++  GL   D  T    I    + GK+  A     
Sbjct: 221 FCYNAIISCLSKAGKMEEASTYLLEIQGRGL-KPDAVTFGAFILGYSKTGKMTEAAKYFD 279

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G+  +  ++ VLI  + K G + E++ IF  +  LGV   V++  A    +L+ G
Sbjct: 280 EMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNG 339

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A + F+++  +G+ P   TY+ ++ GF    ++E A    ++M  +GI+ ++  YN
Sbjct: 340 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 399

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +++G  +   +  A KLF  M EK +EP  ++Y+TMI GY   E   +A  +F EM S 
Sbjct: 400 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 459

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V+P++  Y AL+ G C  G M +   + REM+++      +  F  L+   CKS  +  
Sbjct: 460 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS--FNTLIDGYCKSCKIQE 517

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A+ + + MI   I  +   Y  +I+  CKA   + A  L  ++ E+ +I+     L    
Sbjct: 518 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFAL---- 573

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
                                 F +++ KGV  D V +  +I  H KE N   AF++   
Sbjct: 574 ----------------------FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 611

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +  +G+      +  LI +  ++ +  +A   LD M E G  P+ +   +++ S  E G+
Sbjct: 612 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 671

Query: 500 VQTASRVMKSMVEKGV 515
           +  A+RV + +   G+
Sbjct: 672 MDEATRVFEGVKSLGL 687



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 224/482 (46%), Gaps = 11/482 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L + GK+  A  IL  M   G + +   F +LIE Y ++  +  ++++ D M
Sbjct: 82  TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 141

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ++  +  S  SY A+   +       +A +   KM   G++P    Y+ ++ G+    ++
Sbjct: 142 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 201

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A R  + M   G++ D+  YN +I+  ++  KM+EA     E++ + ++P  +++   
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 261

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY    +  +A + FDEM    + PN   YT L+ G   AG ++E   + R +    +
Sbjct: 262 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 321

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P   +    + G+  K+G +  A  V   +    +  +   Y  LI  FCK    ++A 
Sbjct: 322 LPDVQTCSAFIHGLL-KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 380

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           +L D++  K I   P   +      YN ++  LC +G   +A   F  + +KG+  D V 
Sbjct: 381 ELHDEMCLKGI--APNIFI------YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 432

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           ++ +I G+ K  N   AF +   M  +GV   +  Y  L+    ++G+   A      M+
Sbjct: 433 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 492

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           + G +   S F ++++   +  ++Q AS++ + M+ K +  +      +++     G +E
Sbjct: 493 QKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 551

Query: 537 EA 538
           EA
Sbjct: 552 EA 553



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/511 (23%), Positives = 239/511 (46%), Gaps = 28/511 (5%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G++  AR +L  M   GV  D   +  +I    K G ++E+      ++  G++    ++
Sbjct: 199 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 258

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            A      + G+   A +YF++ML  G+ P    Y V++ G F +  L  A+  F  + +
Sbjct: 259 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 318

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G+  DV T +  I+G  +  ++ EA K+F+E+KEK + P V +Y+++I G+      + 
Sbjct: 319 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 378

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A  + DEM    + PN   Y AL+ GLC +G +   +K+   M E+ + P D+  +  ++
Sbjct: 379 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP-DSVTYSTMI 437

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              CKS ++  A  +   M    +   +  Y  L+   CK    ++A+ L  ++++K   
Sbjct: 438 DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF- 496

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
               +TL     S+N +I   C + +  +A   F++++ K ++ D V +  +I  H K G
Sbjct: 497 ---ATTL-----SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 548

Query: 429 N-----------------PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
                              D+ F + + M  +GV  D   Y  +I ++ ++    +A   
Sbjct: 549 KMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 608

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            D ++  G     ++   ++ +L +   +  AS+++  M E G+K +L   + ++ +   
Sbjct: 609 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHE 668

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
            G ++EA    + +   G VP+  +L+ +++
Sbjct: 669 AGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 699



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/533 (23%), Positives = 226/533 (42%), Gaps = 48/533 (9%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M + G+  +  +Y  +   + R  R   AK  F +M   G++P  +  + ++ GF     
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           ++  +R  + M S GI ++++TYN +I+G  +F KM++A ++   M     +P   ++  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I+GY        AL + DEM+  ++ P+AV+Y A++ GLC    +    K+L +M    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P  N V                                   Y  LI  +      + A
Sbjct: 181 LKP--NVVV----------------------------------YSTLIMGYASEGRIEEA 204

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
            +LLD +          S +  +   YN +I  L   G+  +A  +  ++  +G+  D V
Sbjct: 205 RRLLDGM--------SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 256

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            F   I G+SK G    A +    M   G+  +   Y  LI  + + G   +A +    +
Sbjct: 257 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 316

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
              G  P      + +  L ++GRVQ A +V   + EKG+  ++   + ++     +G V
Sbjct: 317 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 376

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           E+A    D M   G  PN   +++L+  L + G    A KL D    +    D  +Y  +
Sbjct: 377 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 436

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
           +D    +     A+S+  ++  KG        + L+ G  +EG+ ++A  L R
Sbjct: 437 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 489


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 246/540 (45%), Gaps = 46/540 (8%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           NK R L      N + + L  +     AL FF+ +  AGL +    T+  +I  L R G 
Sbjct: 208 NKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGL-SPSVFTYNMVIGCLAREGD 266

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           L  AR +  +M  KG++ D   +  LI+ YGK G++  +V +F+ MK  G E  V +Y++
Sbjct: 267 LEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNS 326

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM---- 187
           L     +  R   A  Y + M   G++P   TY+ ++  F  +  L  A +FF DM    
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386

Query: 188 -------------------------------KSRGISLDVVTYNTMINGYNRFKKMDEAE 216
                                          +  G++L++VTY  +++G     +M EAE
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +LF  + +         YT++  GY+  +  + A+ I +EM   ++KP+ + Y   + GL
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   ++ +   V+REM++  +   ++ ++  L+    K G    A ++L+ M  L I   
Sbjct: 507 CRQNEIEDSMAVIREMMDCGLT-ANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKIT 565

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              YG+LI+  CK  +  +A++  D +      L+P   +      Y  +I  LC N   
Sbjct: 566 VVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG--LQPNIMI------YTALIDGLCKNDCL 617

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A+  F +++ KG+  D + + +LI G+ K GNP  A  +   M   G+  D  AY  L
Sbjct: 618 EEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSL 677

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I  + R G+   AK+ LD M+  G  P   L   ++   +E G +  A  +   M  +G+
Sbjct: 678 IWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 147/612 (24%), Positives = 275/612 (44%), Gaps = 64/612 (10%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDM-------PKKGVQWDEDMFEVLIESY 101
            G+F  D  + +K   +LGR        C   DM        + G    + +F VL++  
Sbjct: 140 CGMFYLDARSVIKEWILLGR----EFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVD-- 193

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
              G+++E+ + F  M +  V   V+S + L   + +  +  +A  +F  M+  G+ P+ 
Sbjct: 194 --LGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSV 251

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
            TYN+++        LE A   FE+MK++G+  D+VTYN++I+GY +   +  A  +F E
Sbjct: 252 FTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEE 311

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           MK+   EP VI+Y ++I  +   ER   A      MK   ++PN VTY+ L+   C AG 
Sbjct: 312 MKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGM 371

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           ++E  K   +M+   + P + + +  L+   CK G LN A           + +E    G
Sbjct: 372 LLEANKFFVDMIRVGLQPNEFT-YTSLIDANCKIGDLNEA---------FKLESEMQQAG 421

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
           +                                  ++   +Y  ++  LC +G+  +AE 
Sbjct: 422 V----------------------------------NLNIVTYTALLDGLCEDGRMREAEE 447

Query: 402 FFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F  L+K G  L+   + +L  G+ K    + A +I++ M ++ +  D   Y   I    
Sbjct: 448 LFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLC 507

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           R+ E  D+   +  M++ G +  S ++ +++++ F+ G+   A  +++ M + G+K  + 
Sbjct: 508 RQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVV 567

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
               +++ L   G V++A+   D M ++G  PN   + +L+  L +      A  L +  
Sbjct: 568 TYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEM 627

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
           L +    D   Y  ++D  +  G    A S+  +++E G   D  +   LI G ++ G  
Sbjct: 628 LDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQV 687

Query: 638 KQA-DILSRMIR 648
           + A  +L  M+R
Sbjct: 688 QLAKSLLDEMLR 699



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 148/617 (23%), Positives = 275/617 (44%), Gaps = 64/617 (10%)

Query: 35  NSEHALQFFRWV-ERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE-D 92
           + + AL+FF+    RAG F H  E++  +  IL        AR ++ +    G ++   D
Sbjct: 107 DPKSALKFFKEAGARAG-FRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPGCD 165

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            F++L   +  + + +    +FD                LF +++  G    A++ F KM
Sbjct: 166 FFDML---WSTRNVCRPGFGVFD---------------TLFNVLVDLGMLEEARQCFWKM 207

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
               + P   + N +L     S K   A+ FF+DM   G+S  V TYN +I    R   +
Sbjct: 208 NKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDL 267

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A  LF EMK K + P +++Y ++I GY  V     A+ +F+EMK    +P+ +TY +L
Sbjct: 268 EAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSL 327

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +   C   ++ +  + L  M +R + P +   +  L+   CK+G L  A      MIR+ 
Sbjct: 328 INCFCKFERIPQAFEYLHGMKQRGLQP-NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  LI+  CK    + A KL     E E+    Q+ +++   +Y  ++  LC 
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKL-----ESEM---QQAGVNLNIVTYTALLDGLCE 438

Query: 393 NGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           +G+  +AE  F  L+K G  L+   + +L  G+ K    + A +I++ M ++ +  D   
Sbjct: 439 DGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLL 498

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y   I    R+ E  D+   +  M++ G +  S ++ +++++ F+ G+   A  +++ M 
Sbjct: 499 YGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAV 571
           + G+K  +     +++ L   G V++A+   D M ++G  PN                  
Sbjct: 559 DLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPN------------------ 600

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
                         +  Y  ++D L        A ++  ++++KG   D      LI G 
Sbjct: 601 --------------IMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGN 646

Query: 632 NQEGNTKQA-DILSRMI 647
            + GN  +A  + +RM+
Sbjct: 647 MKHGNPGEALSLRNRMV 663



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 35/213 (16%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I+   +VGK   A  +L +M   G++     + VLI+   K G+VQ++V+ FD M 
Sbjct: 534 YTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMT 593

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR----------------- 161
           + G++ ++  Y AL   + +      AK  FN+ML +GI P +                 
Sbjct: 594 RNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPG 653

Query: 162 ------------------HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
                               Y  ++WGF    +++ A    ++M  +GI  D V    ++
Sbjct: 654 EALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLL 713

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
             Y     ++EA  L  +M  + +    I  T 
Sbjct: 714 RKYYELGDINEALALHDDMARRGLISGTIDITV 746


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 235/492 (47%), Gaps = 13/492 (2%)

Query: 87  VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
           + +D   + +LI  + ++  +  ++ +   M +LG E  + +  +L        R   A 
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
              ++M     +P   T+N ++ G FL  K   A+   + M +RG   D+ TY T++NG 
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +   +D A  L  +M++  IE  V+ YTT+I      +  +DAL +F EM +  ++PN 
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VTY +L+  LC+ G+  +  ++L +M+ER I P +   F  L+    K G L  A  +  
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            MI+ SI  +   Y  LI  FC  +  D A  + + ++ K+    P         +YN +
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVV------TYNTL 401

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I+  C   +  +    FR++ ++G++ + V +N LI+G  + G+ D A +I K M   GV
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
           P D   Y  L++   + G+   A    + + +    P    +  ++E + + G+V+    
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           +  S+  KGVK N+ +   ++     +G  EEA      M + G++PN   +++L+    
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581

Query: 563 EKGKTIAAVKLL 574
             G   A+ +L+
Sbjct: 582 RDGDKAASAELI 593



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 208/428 (48%), Gaps = 12/428 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + L++ +    K SE      R V R      D  T+  ++  L + G ++ A  +L  M
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGC--QPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K  ++ D  ++  +I++      V +++ +F  M   G+  +V +Y++L + +   GR+
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R  + M+   I P   T++ ++  F    KL  A + +++M  R I  D+ TY+++
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING+    ++DEA+ +F  M  K+  P V++Y T+IKG+   +R ++ + +F EM    +
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             N VTY  L+ GL  AG     QK+ ++MV   +PP D   +  LL   CK G L  A 
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-DIITYSILLDGLCKYGKLEKAL 485

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V + + +  +  +   Y I+IE  CKA   +    L   L  K +  +P   +      
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV--KPNVII------ 537

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  MI   C  G   +A+  FR++ + G L +   +N LIR   ++G+  ++ E++K M 
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597

Query: 442 RRGVPRDA 449
             G   DA
Sbjct: 598 SCGFVGDA 605



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 229/514 (44%), Gaps = 30/514 (5%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           ++D  ++  +I    R  +L  A  +L  M K G + D      L+  Y     + E+V 
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + D M  +  + +  +++ L   +    +   A    ++M++ G +P   TY  ++ G  
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               ++ A+   + M+   I  DVV Y T+I+    +K +++A  LF EM  K I P V+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y ++I+      R  DA R+  +M    + PN VT++AL+      GK+VE +K+  EM
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           ++R I P D   +  L+   C    L+ A  + + MI          Y  LI+ FCKA+ 
Sbjct: 352 IKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 353 YDRAIKLLDKLVEKEII------------LRPQSTLDM---------------EASSYNP 385
            +  ++L  ++ ++ ++            L      DM               +  +Y+ 
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 386 MIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++  LC  G+  KA + F  L K K   D   +N +I G  K G  +  +++   +  +G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V  +   Y  +I  + RKG   +A      M EDG  P S  + +++ +   DG    ++
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            ++K M   G   +   ++ ++  +L  G +E++
Sbjct: 591 ELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 623



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/541 (20%), Positives = 232/541 (42%), Gaps = 44/541 (8%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + ++V +F  M Q     S+  ++ L   I +  ++ +      +M +  I    ++YN+
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    +L  A+     M   G   D+VT ++++NGY   K++ EA  L  +M    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P  +++ T+I G     +A +A+ + D M +   +P+  TY  ++ GLC  G +    
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +L++M E+     D  ++  ++   C   ++N A ++   M    I      Y  LI  
Sbjct: 241 SLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C    +  A +LL  ++E++I        +    +++ +I      G+  +AE  + ++
Sbjct: 300 LCNYGRWSDASRLLSDMIERKI--------NPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351

Query: 407 MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +K+ + DP    +++LI G       D A  + ++M  +    +   Y  LI+ + +   
Sbjct: 352 IKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +       M + G    +  + ++++ LF+ G    A ++ K MV  GV  ++   + 
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           +L+ L   G +E+AL   + + +S   P                                
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEP-------------------------------- 498

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
           D+ +Y  +++ +  AGK  + + +   +  KG   +      +I+G  ++G  ++AD L 
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558

Query: 645 R 645
           R
Sbjct: 559 R 559



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 129/577 (22%), Positives = 232/577 (40%), Gaps = 54/577 (9%)

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY-FNKMLSEGIEPTRHT 163
           GIV    K   + K+      ++    LF L   RG Y  A  Y + + LS  +      
Sbjct: 8   GIVASQSKKMSLAKRFA---QLRKASPLFSL---RGVYFSAASYDYREKLSRNV------ 55

Query: 164 YNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
                    L LKL+ A+  F +M +SR +   +V +N +++   +  K D    L   M
Sbjct: 56  --------LLDLKLDDAVDLFGEMVQSRPLP-SIVEFNKLLSAIAKMNKFDLVISLGERM 106

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           +   I   + SY  +I  +    +   AL +  +M     +P+ VT ++LL G C   ++
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166

Query: 283 VEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
            E   ++ +M V  Y P  +   F  L+         + A  ++  M+      +   YG
Sbjct: 167 SEAVALVDQMFVMEYQP--NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            ++   CK    D A+ LL K+ + +I        + +   Y  +I  LC+      A  
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKI--------EADVVIYTTIIDALCNYKNVNDALN 276

Query: 402 FFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F ++  KG+  + V +N+LIR     G    A  ++  M  R +  +   +  LI++++
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           ++G+  +A+   D MI+    P    + S++       R+  A  + + M+ K    N+ 
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
               +++       VEE +     M Q G V N   +++L+  L + G    A K+    
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSIL--------------FKIMEKGGVTDWKS 623
           +      D+ +Y  +LD L   GK   A  +               + IM +G     K 
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516

Query: 624 SD--KLIAGLNQEGNTKQADILSRMIRGEMSRGSQKE 658
            D   L   L+ +G      I + MI G   +G ++E
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 155/604 (25%), Positives = 280/604 (46%), Gaps = 36/604 (5%)

Query: 56  RETHLKMIEILGRVGKLNHARCILLDM--PKKGVQWDEDMF---------------EVLI 98
           R  H++ ++ L + G+   AR ++  M  PK        ++               ++L+
Sbjct: 60  RHEHVQKLQTLLQQGRTETARRLIRSMLLPKSPFSSPSHLYTLFSLSSTPMKPLFSDMLL 119

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
               +  +V ES +++ +MK+ GV  SV S +   + ++   RY    + F++++  G+ 
Sbjct: 120 SICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLR 179

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P +  Y   +        L+ AI     MK  G+S  V  YN +I G  + K+M +AEKL
Sbjct: 180 PDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKL 239

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F EM ++ + P  I+Y T+I GY  V + ++A  I + MK  +V+P  +T+ +LL GLC 
Sbjct: 240 FDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCR 299

Query: 279 AGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
           A  M E Q+VL EM V  ++P  D   +  L     K G+++A+  + +  +R  +    
Sbjct: 300 AQMMEEAQRVLEEMEVYGFVP--DRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILD 357

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
               IL+   CK    ++A ++L K +E    L P          +N ++   C  G   
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLKKFLENG--LAPVGVF------FNTIVNGYCQVGDIN 409

Query: 398 KAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
           KA     ++   G L P  V +N+L++   +  N + A + +K M  +GV  + + Y  L
Sbjct: 410 KAYTTIEKMEAVG-LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+ Y R          L+ M + G  P    +  ++  L +D  +  A  ++  MV +GV
Sbjct: 469 IDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGV 528

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             N  +   +++   + G +++A    D M+    VP    ++ L++ L +KGK + A  
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAEN 588

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGL 631
           L      +    D+ +Y  ++    +AG    A   L++ M+K G+     +  +LIAG 
Sbjct: 589 LASEITRKGLSFDVITYNSLISGYSSAGNVQKALE-LYETMKKSGIKPTLNTYHRLIAGC 647

Query: 632 NQEG 635
            +EG
Sbjct: 648 GKEG 651



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 165/701 (23%), Positives = 288/701 (41%), Gaps = 132/701 (18%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           NL    L   K  E  LQ F  +  +GL   D+  + K I+   ++G L  A  ++  M 
Sbjct: 151 NLFLESLVSTKRYEDTLQLFSEIVESGL-RPDQFMYGKAIQAAVKLGDLKRAIELMTCMK 209

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           + GV     ++ V+I    K+  ++++ K+FD M    V  +  +Y+ L     + G+  
Sbjct: 210 RGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLE 269

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A     +M  E +EPT  T+N +L G   +  +E A R  E+M+  G   D  TY T+ 
Sbjct: 270 EAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLF 329

Query: 204 NGY--------------------------------NRFKK---MDEAEKLFAEMKEKNIE 228
           +G+                                N   K   M++AE++  +  E  + 
Sbjct: 330 DGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLA 389

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P  + + T++ GY  V   + A    ++M++  ++PN VTY +L+   C+   M E +K 
Sbjct: 390 PVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKC 449

Query: 289 LREMVERYIPP---------------------------------KDNSV-FMKLLGVQCK 314
           +++MVE+ + P                                 K N + +  L+   CK
Sbjct: 450 IKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCK 509

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
             ++  A  +L  M+   +   A  Y +LI+  C A     A +  D++V +EI+     
Sbjct: 510 DANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV----P 565

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
           TL     +YN +I  LC  G+  +AE    ++ +KG+  D + +N+LI G+S  GN   A
Sbjct: 566 TL----VTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKA 621

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            E+ + M + G+    + Y  LI    ++G     K     M++    P   ++ +++  
Sbjct: 622 LELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKI-YQEMLQMNLVPDRVIYNALIHC 680

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR-------IDLMM 546
             E G VQ A  +  +M  +G++ +     K+    L+ GH +E  GR       ++ M 
Sbjct: 681 YVEHGDVQKACSLHSAMEAQGIQPD-----KMTYNCLILGHFKE--GRMHKVKNLVNDMK 733

Query: 547 QSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
             G +P    +D L+         +   KL DF                 D         
Sbjct: 734 IRGLIPKTETYDILI---------VGHCKLKDF-----------------DG-------- 759

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
            AY    ++ E G        D LI GL +EG +  AD++ 
Sbjct: 760 -AYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVIC 799



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/516 (23%), Positives = 229/516 (44%), Gaps = 13/516 (2%)

Query: 1   MAERAWTTRLQNKIRALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
           M E A     + ++   VP +F +  +++      N + ++       R G+   D    
Sbjct: 302 MMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCS 361

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
           + ++  L + G +  A  +L    + G+      F  ++  Y + G + ++    + M+ 
Sbjct: 362 I-LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           +G+  +  +Y++L K          A++   KM+ +G+ P   TYN ++ G+  S   + 
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
             +  E+M+ +G+  +V++Y  +IN   +   + EAE +  +M  + + P    Y  +I 
Sbjct: 481 CFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLID 540

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G     +  DA R FDEM + ++ P  VTY  L+ GLC  GK++E + +  E+  + +  
Sbjct: 541 GSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLS- 599

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D   +  L+     +G++  A ++ + M +  I      Y  LI   C  E     + L
Sbjct: 600 FDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKE----GLVL 654

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
           ++K+ ++ +    Q  L  +   YN +I     +G   KA      +  +G+  D + +N
Sbjct: 655 VEKIYQEML----QMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYN 710

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            LI GH KEG       +V  M  RG+    + Y  LI  + +  +   A      M E+
Sbjct: 711 CLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFEN 770

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           G +P+ S+  +++  L E+GR   A  +   M  KG
Sbjct: 771 GFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 252/548 (45%), Gaps = 48/548 (8%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+E   K+G ++E++ +   +   GV  ++  Y+AL   + +  ++  A+  F++M   G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TY++++  F    KL+TA+ F  +M   G+ L V  YN++ING+ +F  +  AE
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
              AEM  K +EPTV++YT+++ GY +  + + ALR++ EM    + P+  T+T LL GL
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
             AG + +  K+  EM E  + P                              R++    
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPN-----------------------------RVT---- 544

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y ++IE +C+     +A + L ++ EK I+  P      +  SY P+I  LC  GQ 
Sbjct: 545 ---YNVMIEGYCEEGDMSKAFEFLKEMTEKGIV--P------DTYSYRPLIHGLCLTGQA 593

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A++F   L K    L+ + +  L+ G  +EG  + A  + + M +RGV  D   Y  L
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+  L+  +       L  M + G  P   ++ S++++  + G  + A  +   M+ +G 
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             N      ++  L   G V EA      M    SVPN   +   L +L++    +    
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV 773

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
            L   + +  + + A+Y  ++      G+   A  ++ +++  G   D  +   +I  L 
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833

Query: 633 QEGNTKQA 640
           +  + K+A
Sbjct: 834 RRNDVKKA 841



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 128/553 (23%), Positives = 249/553 (45%), Gaps = 16/553 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           F++LI+ Y +   V + V +F +M  ++ +   V++  AL   +++   + +A   FN M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +S GI P  + Y  ++        L  A      M++ G  +++V YN +I+G  + +K+
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            EA  +  ++  K+++P V++Y T++ G   V+  +  L + DEM      P+    ++L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GL   GK+ E   +++ +V+  + P +  V+  L+   CK    + A  +   M ++ 
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSP-NLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y ILI+ FC+    D A+  L ++V+        + L +    YN +I   C 
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD--------TGLKLSVYPYNSLINGHCK 449

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            G    AE F  +++ K  L+P  V + +L+ G+  +G  + A  +   M  +G+     
Sbjct: 450 FGDISAAEGFMAEMINKK-LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +  L+    R G   DA    + M E    P    +  ++E   E+G +  A   +K M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
            EKG+  +      ++  L + G   EA   +D + +     N   +  LL     +GK 
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A+ +    + R   +DL  Y  ++D  L        + +L ++ ++G   D      +
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688

Query: 628 IAGLNQEGNTKQA 640
           I   ++ G+ K+A
Sbjct: 689 IDAKSKTGDFKEA 701



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 225/535 (42%), Gaps = 52/535 (9%)

Query: 25  LVYNVL-----HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
            VYN L      G K  E  L F R + + GL  +D  T+  +I++  R GKL+ A   L
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDR-MGKIGLRPNDV-TYSILIDMFCRRGKLDTALSFL 425

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M   G++     +  LI  + K G +  +      M    +E +V +Y +L      +
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G+   A R +++M  +GI P+ +T+  +L G F +  +  A++ F +M    +  + VTY
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N MI GY     M +A +   EM EK I P   SY  +I G     +A +A    D +  
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP--------------------- 298
            + + N + YT LL G C  GK+ E   V +EMV+R +                      
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665

Query: 299 -------------PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL-SIPTEAGHYGILI 344
                          D+ ++  ++  + K+G    A  +   MI    +P E   Y  +I
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVI 724

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
              CKA   + A  L  K       ++P S++  +  +Y   +  L       +  +   
Sbjct: 725 NGLCKAGFVNEAEVLCSK-------MQPVSSVPNQV-TYGCFLDILTKGEVDMQKAVELH 776

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
             + KG+L +   +N LIRG  ++G  + A E++  M   GV  D   Y  +I    R+ 
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           +   A    +SM E G  P    + +++      G +  A+ +   M+ +G+  N
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 2/215 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  MI+   + G    A  I   M  +G   +E  +  +I    K G V E+  + 
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY-FNKMLSEGIEPTRHTYNVMLWGFFL 173
             M+ +    +  +Y   F  IL +G   M K    +  + +G+     TYN+++ GF  
Sbjct: 741 SKMQPVSSVPNQVTY-GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCR 799

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
             ++E A      M   G+S D +TY TMIN   R   + +A +L+  M EK I P  ++
Sbjct: 800 QGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
           Y T+I G         A  + +EM    + PN  T
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 235/492 (47%), Gaps = 13/492 (2%)

Query: 87  VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
           + +D   + +LI  + ++  +  ++ +   M +LG E  + +  +L        R   A 
Sbjct: 95  ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 154

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
              ++M     +P   T+N ++ G FL  K   A+   + M +RG   D+ TY T++NG 
Sbjct: 155 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 214

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +   +D A  L  +M++  IE  V+ YTT+I      +  +DAL +F EM +  ++PN 
Sbjct: 215 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 274

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VTY +L+  LC+ G+  +  ++L +M+ER I P +   F  L+    K G L  A  +  
Sbjct: 275 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYD 333

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            MI+ SI  +   Y  LI  FC  +  D A  + + ++ K+    P         +YN +
Sbjct: 334 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVV------TYNTL 385

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I+  C   +  +    FR++ ++G++ + V +N LI+G  + G+ D A +I K M   GV
Sbjct: 386 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
           P D   Y  L++   + G+   A    + + +    P    +  ++E + + G+V+    
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 505

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           +  S+  KGVK N+ +   ++     +G  EEA      M + G++PN   +++L+    
Sbjct: 506 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 565

Query: 563 EKGKTIAAVKLL 574
             G   A+ +L+
Sbjct: 566 RDGDKAASAELI 577



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 208/428 (48%), Gaps = 12/428 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + L++ +    K SE      R V R      D  T+  ++  L + G ++ A  +L  M
Sbjct: 173 NTLIHGLFLHNKASEAVALIDRMVARGC--QPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K  ++ D  ++  +I++      V +++ +F  M   G+  +V +Y++L + +   GR+
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R  + M+   I P   T++ ++  F    KL  A + +++M  R I  D+ TY+++
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING+    ++DEA+ +F  M  K+  P V++Y T+IKG+   +R ++ + +F EM    +
Sbjct: 351 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             N VTY  L+ GL  AG     QK+ ++MV   +PP D   +  LL   CK G L  A 
Sbjct: 411 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-DIITYSILLDGLCKYGKLEKAL 469

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V + + +  +  +   Y I+IE  CKA   +    L   L  K +  +P   +      
Sbjct: 470 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV--KPNVII------ 521

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  MI   C  G   +A+  FR++ + G L +   +N LIR   ++G+  ++ E++K M 
Sbjct: 522 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 581

Query: 442 RRGVPRDA 449
             G   DA
Sbjct: 582 SCGFVGDA 589



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 229/514 (44%), Gaps = 30/514 (5%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           ++D  ++  +I    R  +L  A  +L  M K G + D      L+  Y     + E+V 
Sbjct: 96  SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 155

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + D M  +  + +  +++ L   +    +   A    ++M++ G +P   TY  ++ G  
Sbjct: 156 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 215

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               ++ A+   + M+   I  DVV Y T+I+    +K +++A  LF EM  K I P V+
Sbjct: 216 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 275

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y ++I+      R  DA R+  +M    + PN VT++AL+      GK+VE +K+  EM
Sbjct: 276 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 335

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           ++R I P D   +  L+   C    L+ A  + + MI          Y  LI+ FCKA+ 
Sbjct: 336 IKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394

Query: 353 YDRAIKLLDKLVEKEII------------LRPQSTLDM---------------EASSYNP 385
            +  ++L  ++ ++ ++            L      DM               +  +Y+ 
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 454

Query: 386 MIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++  LC  G+  KA + F  L K K   D   +N +I G  K G  +  +++   +  +G
Sbjct: 455 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 514

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V  +   Y  +I  + RKG   +A      M EDG  P S  + +++ +   DG    ++
Sbjct: 515 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 574

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            ++K M   G   +   ++ ++  +L  G +E++
Sbjct: 575 ELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 607



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/541 (20%), Positives = 232/541 (42%), Gaps = 44/541 (8%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + ++V +F  M Q     S+  ++ L   I +  ++ +      +M +  I    ++YN+
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    +L  A+     M   G   D+VT ++++NGY   K++ EA  L  +M    
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P  +++ T+I G     +A +A+ + D M +   +P+  TY  ++ GLC  G +    
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +L++M E+     D  ++  ++   C   ++N A ++   M    I      Y  LI  
Sbjct: 225 SLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C    +  A +LL  ++E++I        +    +++ +I      G+  +AE  + ++
Sbjct: 284 LCNYGRWSDASRLLSDMIERKI--------NPNVVTFSALIDAFVKEGKLVEAEKLYDEM 335

Query: 407 MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +K+ + DP    +++LI G       D A  + ++M  +    +   Y  LI+ + +   
Sbjct: 336 IKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +       M + G    +  + ++++ LF+ G    A ++ K MV  GV  ++   + 
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 454

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           +L+ L   G +E+AL   + + +S   P                                
Sbjct: 455 LLDGLCKYGKLEKALVVFEYLQKSKMEP-------------------------------- 482

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
           D+ +Y  +++ +  AGK  + + +   +  KG   +      +I+G  ++G  ++AD L 
Sbjct: 483 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 542

Query: 645 R 645
           R
Sbjct: 543 R 543



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 114/509 (22%), Positives = 210/509 (41%), Gaps = 33/509 (6%)

Query: 172 FLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
            L LKL+ A+  F +M +SR +   +V +N +++   +  K D    L   M+   I   
Sbjct: 40  LLDLKLDDAVDLFGEMVQSRPLP-SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYD 98

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           + SY  +I  +    +   AL +  +M     +P+ VT ++LL G C   ++ E   ++ 
Sbjct: 99  LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 158

Query: 291 EM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
           +M V  Y P  +   F  L+         + A  ++  M+      +   YG ++   CK
Sbjct: 159 QMFVMEYQP--NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 216

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
               D A+ LL K+ + +I        + +   Y  +I  LC+      A   F ++  K
Sbjct: 217 RGDIDLALSLLKKMEKGKI--------EADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 268

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G+  + V +N+LIR     G    A  ++  M  R +  +   +  LI++++++G+  +A
Sbjct: 269 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 328

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           +   D MI+    P    + S++       R+  A  + + M+ K    N+     +++ 
Sbjct: 329 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 388

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
                 VEE +     M Q G V N   +++L+  L + G    A K+    +      D
Sbjct: 389 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 448

Query: 586 LASYEKVLDALLAAGKTLNAYSIL--------------FKIMEKGGVTDWKSSD--KLIA 629
           + +Y  +LD L   GK   A  +               + IM +G     K  D   L  
Sbjct: 449 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 508

Query: 630 GLNQEGNTKQADILSRMIRGEMSRGSQKE 658
            L+ +G      I + MI G   +G ++E
Sbjct: 509 SLSLKGVKPNVIIYTTMISGFCRKGLKEE 537


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 159/660 (24%), Positives = 283/660 (42%), Gaps = 70/660 (10%)

Query: 11  QNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR-- 68
            ++++ L PQ   + V  ++   K++E  +QFF W+ +   + H+    + M+  L R  
Sbjct: 63  SSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDR 122

Query: 69  -VGKLNHARCILL-----------------DMPKKGVQWDEDMFEVLIESYGKKGIVQES 110
                +H R +++                 ++   G  +       L+    K  +V+ +
Sbjct: 123 VFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGA 182

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             ++  M   G++ S+ +++ L  ++ ++G+   A+   +++    + P   TY  ++ G
Sbjct: 183 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
              +  L+ A   F+ M   G   + VTY+T+ING     ++DEA  +  EM EK IEPT
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPT 302

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V +YT  I    A+E  ++A+ +   MK    +PN  TYTAL+ GL   GK         
Sbjct: 303 VYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK--------- 353

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
                                      L  A  +   M++  +      Y  LI   C  
Sbjct: 354 ---------------------------LEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 386

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
             +  A+K+   +     +   Q        +YN +I+ LC  G   KA + F +++K G
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQ--------TYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438

Query: 411 VLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
            L   V +N LI G+  +GN ++A  ++ +M   G   D   Y  L+  + + G+   A 
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
                M+E G +P    + ++++   +DG+V  A  ++K M E G   N++    ++  L
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
                  EA    D M++ G +PN   + +L+  L   G+T  A K+      R C+ +L
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGLNQEGNTKQADILSR 645
            +Y  ++  L   GK   A  IL K ME+ G+  D  +   LI G    G    A +L R
Sbjct: 619 YTYSSLIYGLCQEGKADEA-EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR 677



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 162/331 (48%), Gaps = 3/331 (0%)

Query: 16  ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
            LVP    +N + N L        AL+ F W+E  G    + +T+ ++I+ L   G +  
Sbjct: 368 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL-ANTQTYNEIIKGLCLGGDIEK 426

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +   M K G       +  LI  Y  KG V  + ++ D+MK+ G E    +Y+ L  
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
              + G+   A  YF +M+  G+ P   +Y  ++ G     K++ A+   + M+  G + 
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNP 546

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           +V +YN +ING ++  +  EAEK+  +M E+ + P VI+YTT+I G     R   A +IF
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            +M+     PN  TY++L+ GLC  GK  E + +L+EM  + + P D   F  L+     
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP-DEVTFTSLIDGFVV 665

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            G ++ A  +L+ M+ +        Y +L++
Sbjct: 666 LGRIDHAFLLLRRMVDMGCKPNYRTYSVLLK 696



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 171/402 (42%), Gaps = 45/402 (11%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           +T+  +I  L R+GKL  A  +   M K+G+  +   +  LI      G    ++KIF  
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M+  G   + ++Y+ + K +   G    A   F KML  G  PT  TYN ++ G+     
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +  A R  + MK  G   D  TYN +++G++++ K++ A   F EM E  + P  +SYT 
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G+    + D AL +   M+     PN  +Y A++ GL    +  E +K+  +MVE+ 
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P +   +  L+   C++G    A  +   M +         Y  LI   C+       
Sbjct: 579 LLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ------- 630

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
                                                G+  +AEI  +++ +KG+  D V
Sbjct: 631 ------------------------------------EGKADEAEILLKEMERKGLAPDEV 654

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
            F +LI G    G  D AF +++ M   G   +   Y  L++
Sbjct: 655 TFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLK 696


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 237/498 (47%), Gaps = 11/498 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L   G++  A  +L DM ++G      M+ V +E+  +    + +V +   +
Sbjct: 113 TYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDL 172

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLK 176
              G    V + + + + +  +G    A R    +L S G EP   +YN +L G  ++ +
Sbjct: 173 HGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARR 232

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
                   E+M + G   ++VT++T+I    R    +   ++ A+M E    P V  Y T
Sbjct: 233 WGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYAT 292

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G    ER + A  I + M S+ + PN V Y  LL GLC A +  E + +L EM ++ 
Sbjct: 293 IIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKD 352

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
             P D+  F  L+   C++G ++   +VL+ M+      +   Y  +I  FCK  + D A
Sbjct: 353 C-PLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 411

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           + LL  +       RP +       SY  +++ LC   +   AE    Q++++G   +PV
Sbjct: 412 VMLLRSMAACGC--RPNTV------SYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPV 463

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            FN LI    K+G  + A E++K M   G   D  +Y  +I+   + G   +A   L+ M
Sbjct: 464 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVM 523

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           ++ G SP + ++ S+  +L  +GR+    ++ +++ +  V+ +  L   ++ +L  RG  
Sbjct: 524 VKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGET 583

Query: 536 EEALGRIDLMMQSGSVPN 553
           + A+  +  M+ SG VPN
Sbjct: 584 DRAIEFLAYMVSSGCVPN 601



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 136/575 (23%), Positives = 253/575 (44%), Gaps = 22/575 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  ++  Y + G   +      +   + V  +  +Y  L + +  RGR   A    + M 
Sbjct: 82  YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  PT   Y+V L     +     A+    D+  RG +LDV   N ++        +D
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 214 EAEKLFAEMKEK-NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           EA +L  ++      EP V+SY  +++G     R      + +EM +    PN VT++ L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  G    V +V  +M E    P D  ++  ++   CK   L  A  +L  M    
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAP-DVRMYATIIDGVCKEERLEVARGILNRMPSYG 317

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  L++  C A+ ++ A  LL ++ +K+  L        +  ++N ++  LC 
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPL--------DDVTFNILVDFLCQ 369

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           NG   +      Q+++ G + D + +  +I G  KEG  D A  +++ M   G   +  +
Sbjct: 370 NGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVS 429

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  +++         DA+  +  MI+ G  P    F +++  L + G V+ A  ++K M+
Sbjct: 430 YTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 489

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
             G   +L   + +++ L   G+ +EAL  +++M++ G  PN   + S+ S LS +G+  
Sbjct: 490 VNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRIN 549

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
             +++ +         D   Y  V+ +L   G+T  A   L  ++  G V +  +   LI
Sbjct: 550 KVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILI 609

Query: 629 AGLNQEGNTKQA-DILSRMIRGEMSRGSQKEKKQK 662
            GL  EG  K+A +IL+ +     S+G+ ++   K
Sbjct: 610 RGLASEGFVKEAQEILTELC----SKGALRKHLMK 640



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 203/459 (44%), Gaps = 10/459 (2%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           + NLV   +      + A++  R +  +     D  ++  ++  L    +  H + ++ +
Sbjct: 183 NCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEE 242

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G   +   F  LI    + G+ +   ++   M + G    V+ Y  +   + +  R
Sbjct: 243 MVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEER 302

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             +A+   N+M S G+ P    YN +L G   + + E A     +M  +   LD VT+N 
Sbjct: 303 LEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNI 362

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++   +   +D   ++  +M E    P VI+YTT+I G+      D+A+ +   M +  
Sbjct: 363 LVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACG 422

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +PN V+YT +L GLC A + V+ ++++ +M+++  PP +   F  L+   CK G +  A
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPP-NPVTFNTLINFLCKKGLVEQA 481

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            ++LK M+      +   Y  +I+   KA   D A++LL+ +V+K   + P + +     
Sbjct: 482 IELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG--MSPNTII----- 534

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            Y+ +   L   G+  K    F  +    V  D V +N +I    K G  D A E +  M
Sbjct: 535 -YSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYM 593

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
              G   +   Y  LI     +G   +A+  L  +   G
Sbjct: 594 VSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 86/414 (20%), Positives = 162/414 (39%), Gaps = 44/414 (10%)

Query: 270 TALLPGLCDAGKMVEVQKVL------------REMVERY---------------IPPKDN 302
           +AL+  LC AG+  E  + L              MV  Y               +P   N
Sbjct: 51  SALIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLAAARRLAASVPVAPN 110

Query: 303 S-VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +  +  L+   C  G +  A  VL  M R         Y + +E  C+A  +  A+ +L 
Sbjct: 111 AYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLR 170

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
            L  +   L        +  + N ++Q +C  G   +A    R L+     +P  V++N 
Sbjct: 171 DLHGRGCAL--------DVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNA 222

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           ++RG           ++++ M   G P +   +  LI    R G           M E G
Sbjct: 223 VLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHG 282

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            +P   ++ ++++ + ++ R++ A  ++  M   G+  N+     +L+ L      EEA 
Sbjct: 283 CAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAE 342

Query: 540 GRIDLMMQSGSVP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           G +  M      P     F+ L+  L + G     +++L+  L   C+ D+ +Y  V++ 
Sbjct: 343 GLLAEMFDK-DCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVING 401

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL-NQEGNTKQADILSRMIR 648
               G    A  +L  +   G   +  S   ++ GL + E      +++S+MI+
Sbjct: 402 FCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQ 455


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 168/716 (23%), Positives = 305/716 (42%), Gaps = 121/716 (16%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
             PQ   NL+   L    +S   L+F  W      F+   +     + IL R      A+
Sbjct: 45  FTPQASSNLL---LKSQFDSSLVLKFLDWARSQQFFSF--QCKCLALHILTRYKLYKTAQ 99

Query: 77  CILLDMPKKGV-QWDEDMFEVLIESY-----------------GKKGIVQESVKIFDIMK 118
            +  ++    V +  ED+F+ L  SY                  +  ++ +++ I ++ K
Sbjct: 100 SLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAK 159

Query: 119 QLGVERSVKSYDALFKLILRRGRYM-MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
             G    V SY+A+   ++R  + + +A+  F +M+  G+ P  +TYN+++ GF  +  L
Sbjct: 160 SYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNL 219

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY--- 234
           E  + FF +M+  G   +VVTYNT+I+ Y + +K+ EA KL   M  K + P +ISY   
Sbjct: 220 EMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVV 279

Query: 235 --------------------------------TTMIKGYVAVERADDALRIFDEMKSFDV 262
                                            T+I GY  V     AL +  EM    +
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGL 339

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-----------FMK---- 307
            PN VTYT L+  +C AG +    + L +M +R + P   +            F+K    
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399

Query: 308 -------------------LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                              L+   C  G +  A+ +L+ MI      +   Y  +I  FC
Sbjct: 400 IMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC 459

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           + +  ++A +L  ++V K I          + ++Y+ +IQ LC   + G+    F++++ 
Sbjct: 460 RNQELEKAFQLKVEMVAKGI--------SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLS 511

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G+  D V + +LI  +  EG+ D A  +   M ++G   D   Y  LI  + ++    +
Sbjct: 512 LGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKE 571

Query: 468 AKTALDSMIEDGHSPASSLFRS---------------VMESLFEDGRVQTASRVMKSMVE 512
           AK  L  ++ +   P    + +               +M+     G +  A RV++SM++
Sbjct: 572 AKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQ 631

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV---LSEKGKTIA 569
           KG K N ++   I+      G++E+A      M+ SG  P+  +++++   L  +GK + 
Sbjct: 632 KGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE 691

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
             +LLD+ L + C I  A+  KVL  + +    ++A   + K M   G+  + S++
Sbjct: 692 LNQLLDYTL-KSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSSAN 746



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 195/470 (41%), Gaps = 51/470 (10%)

Query: 213 DEAEKLFAEMKEK--NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +  E LF  +K      + +   +  ++K    V   + AL I +  KS+   P  ++Y 
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171

Query: 271 ALLPGLCDAGKMVEV-QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           A+L  +    + V++ + + +EMVE  + P   +  + + G  C +G+L         M 
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGF-CTAGNLEMGLFFFGEME 230

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           R         Y  +I+ +CK      A KLL  +  K         L+    SYN +I  
Sbjct: 231 RNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK--------GLNPNLISYNVVING 282

Query: 390 LCHNGQTGK-AEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC  GQ  + +EI      ++ V D V FN LI G+   GN   A  +   M + G+  +
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  LI S  + G    A   LD M + G  P    + ++++   + G ++ A ++MK
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS------ 562
            MVE G    +     ++    + G +E+A G +  M++ G +P+  S  +++S      
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 563 -------------EKGKT--IAAVKLL--DFC----LGRDCII-----------DLASYE 590
                         KG +  +A    L    C    LG  C +           D  +Y 
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +++A    G    A  +  ++++KG   D  + + LI G N++  TK+A
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA 572



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 5/179 (2%)

Query: 479 GHSPASSLFRSVMESLFEDGR-VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           G  P    + ++++++    + V+ A  + K MVE GV  N+     ++      G++E 
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
            L     M ++G +PN   +++++    +  K   A KLL     +    +L SY  V++
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL-SRMIRGEMS 652
            L   G+      IL ++ ++  V D  + + LI G    GN  QA +L + M++  +S
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 163/719 (22%), Positives = 312/719 (43%), Gaps = 87/719 (12%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           +++ +  L P     +V +V+   +  E   +FF W  R   F     TH  +I++L + 
Sbjct: 51  MEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVIDMLAKD 109

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
              +    IL ++    +Q     F VLI +Y K G+ +++V+ F  MK  G +  V +Y
Sbjct: 110 DGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTY 169

Query: 130 DALFKLILRRGRYMM-----------------------------------AKRYFNKMLS 154
           +++  +++++  +++                                   A + F++M  
Sbjct: 170 NSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQ 229

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT---------------- 198
           +GI P    Y ++L G   + + +   R    MK  G   D +T                
Sbjct: 230 KGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDE 289

Query: 199 -------------------YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
                              Y+++I+G  R K+ DE ++   +M +  IEP V+ YT +I+
Sbjct: 290 AFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIR 349

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G+  V   D AL + ++M    + P+   Y AL+ G CD G + + + +  E+ +    P
Sbjct: 350 GFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP 409

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
              +  + + G+ C++G L+ A  +   M  L        +  LI+  CKA   + A  L
Sbjct: 410 TSCTYTILICGM-CRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHL 468

Query: 360 LDKL---VEKEIILRPQSTLD--MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
             K+       + LR     D  M+ +S   M++ LC +G   KA     QL   GV+ D
Sbjct: 469 FYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPD 528

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + +N LI G  K  N + AF++ + +  +G   D+  Y  LI+ + R     DA   LD
Sbjct: 529 IMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLD 588

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+++G +P+S++++ +M      G++  A  +    + + +    D   K+ E    +G
Sbjct: 589 QMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLAEEHFEKG 647

Query: 534 HVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL--AS 588
            +E+A   L  ++  + +  +  +   L  L +  ++  A+K+  F + ++C +D+   S
Sbjct: 648 ELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKI--FLVLKECQMDVNPPS 705

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
              +++ L   G    A  I    +EKG +   +  ++L+  L  +   K A D+L+RM
Sbjct: 706 CVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRM 764


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 153/611 (25%), Positives = 283/611 (46%), Gaps = 33/611 (5%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           +R ++P +D   V+++L   +N          V   G+F+        +   L  +G L 
Sbjct: 161 LRRVLPSWD---VFDLLWATRNV--------CVPGFGVFD-------ALFSALIELGMLE 202

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A    L M K  V         L+    K G    S K F  M   G++RSV +Y+ + 
Sbjct: 203 EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 262

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G   MA+  F +M   G  P   TYN ++ G      L+  I  FE MK     
Sbjct: 263 DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 322

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DV+TYN +IN + +F++M +A +   EMK   ++P V++Y+T I  +       +A++ 
Sbjct: 323 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 382

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQ 312
           F +M+   + PN  TYT+L+   C AG + E  K++ E+++  I  K N V +  LL   
Sbjct: 383 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGI--KLNVVTYTALLDGL 440

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           C+ G +  A +V +AM+   +      Y  L+  F KA+  + A  +L ++ EK I  +P
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI--KP 498

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
              L      Y  ++  LC+  +  +A++   ++ + G+  + V +  L+  + K G   
Sbjct: 499 DLLL------YGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 552

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A  +++ M   G+      Y  LI+   + G   +A      M E G  P  +++ +++
Sbjct: 553 EALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALV 612

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-- 549
           + L ++   + A ++   M++KG+  +      +++  +  G+++EAL   D M++ G  
Sbjct: 613 DGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGME 672

Query: 550 -SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
             +  + +L+  LS  G+   A  LLD  +G+  + D   Y  ++    A GK   A  +
Sbjct: 673 LDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 732

Query: 609 LFKIMEKGGVT 619
             ++ ++G +T
Sbjct: 733 QNEMAKRGMIT 743



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 146/625 (23%), Positives = 262/625 (41%), Gaps = 76/625 (12%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM-PKKGVQWDE 91
            +++  AL+FF W +    F H  E +  ++ IL      + A  +L ++   + V    
Sbjct: 109 CQDARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSW 168

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
           D+F++L   +  + +      +FD               ALF  ++  G    A   F K
Sbjct: 169 DVFDLL---WATRNVCVPGFGVFD---------------ALFSALIELGMLEEASECFLK 210

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M    + P   + N +L       + + + +FF+DM + GI   V TYN MI+   +   
Sbjct: 211 MRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGD 270

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           ++ A  LF +MKE    P +++Y ++I G+  +   D+ + IF++MK  D  P+ +TY A
Sbjct: 271 LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 330

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           L+   C   +M +  + L EM    + P  N V                           
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANGLKP--NVV--------------------------- 361

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
                   Y   I+ FCK  M   AIK    +  + + L P         +Y  +I   C
Sbjct: 362 -------TYSTFIDAFCKEGMLQEAIKFFVDM--RRVALTPNEF------TYTSLIDANC 406

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G   +A     ++++ G+ L+ V +  L+ G  +EG    A E+ + M   GV  + +
Sbjct: 407 KAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQE 466

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  L+  +++  E   AK  L  M E    P   L+ +++  L  + R++ A  ++  +
Sbjct: 467 TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI 526

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
            E G+  N  +   +++A    G   EAL  ++ M+  G +     + +L+  L + G  
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLV 586

Query: 568 IAAVKLLDFCLGRDCIIDL----ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
             A+       GR   I L    A Y  ++D L        A  +  ++++KG + D  +
Sbjct: 587 QEAMHHF----GRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIA 642

Query: 624 SDKLIAGLNQEGNTKQA-DILSRMI 647
              LI G  + GN ++A ++  RMI
Sbjct: 643 YTALIDGNMKHGNLQEALNLRDRMI 667


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 226/484 (46%), Gaps = 45/484 (9%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F H  +T   MI  L        A  +L  M ++     ED+F  +  +YG+     ++V
Sbjct: 46  FRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAV 105

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++F  MK+   E S KSY  +F +++   +  +A R++  M   GI P+  + NV++   
Sbjct: 106 RVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKAL 165

Query: 172 FL-SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
              S  ++ A+R F +M +RG   D  TY T+ING  R  K+ EA++LF EM+ K   PT
Sbjct: 166 CKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPT 225

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V++YT++I G    +  D A+R+ +EM S  +KPN  TY++L+ G C +G      ++L 
Sbjct: 226 VVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLD 285

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            MV R   P +   +  L+   CK G L  A ++L  M    +  +AG YG +I  FC  
Sbjct: 286 MMVSRRHLP-NMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDI 344

Query: 351 EMYDRAIKLLDKLVEKEIILRPQS-TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
             +  A   LD++V   I   P   T  +    +N ++Q LC                  
Sbjct: 345 CKFHEAANFLDEMVLGGI--SPNRLTWSLHVRIHNIVVQGLCTE---------------- 386

Query: 410 GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
                              +P+ AF++   M  RG+  DA  +  L+  +  KG+   A 
Sbjct: 387 -------------------HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAA 427

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS--MVEK---GVKENLDLVAK 524
             +D M+ DG  P    + +V+ + ++  +V+ ++ +++   MVE    G     DL+ K
Sbjct: 428 HLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVELMVEHRKMGPDNTNDLIWK 487

Query: 525 ILEA 528
           + E 
Sbjct: 488 VQET 491



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 180/412 (43%), Gaps = 24/412 (5%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           T++ MI+          AE+L   MKE+    T   + ++ + Y  V +  DA+R+F +M
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKM 111

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK-SG 316
           K ++ +P+  +Y  +   L    ++    +  R M E  IPP   S+ + L+   CK SG
Sbjct: 112 KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNV-LIKALCKNSG 170

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            ++AA  + + M     P ++  YG LI   C+      A +L  ++  K          
Sbjct: 171 TMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETK--------AC 222

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFE 435
                +Y  +I  LC +     A     ++  KG+   V  +++L+ GH K G    A E
Sbjct: 223 SPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALE 282

Query: 436 IVKIM-GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           ++ +M  RR +P +   Y  L+    ++G+  +A   LD M   G  P + L+  ++   
Sbjct: 283 LLDMMVSRRHLP-NMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGF 341

Query: 495 FEDGRVQTASRVMKSMVEKGVKEN---LDLVAKILEALLMRGHVEEALGR---IDLMMQS 548
            +  +   A+  +  MV  G+  N     L  +I   ++++G   E   R   + L M++
Sbjct: 342 CDICKFHEAANFLDEMVLGGISPNRLTWSLHVRI-HNIVVQGLCTEHPNRAFQLYLSMRT 400

Query: 549 GSVP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             +      FDSL++    KG    A  L+D  +   CI D  ++  V+ A 
Sbjct: 401 RGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAF 452



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 122/270 (45%), Gaps = 10/270 (3%)

Query: 33  AKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
            KNS   + AL+ FR +   G    D  T+  +I  L R+GK+  A+ +  +M  K    
Sbjct: 166 CKNSGTMDAALRIFREMPNRGC-PPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSP 224

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
               +  LI    +   +  ++++ + M   G++ +V +Y +L     + G    A    
Sbjct: 225 TVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELL 284

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
           + M+S    P   TY+ ++ G     KL+ A+   + MK +G+  D   Y  +I+G+   
Sbjct: 285 DMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDI 344

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY------VAVERADDALRIFDEMKSFDVK 263
            K  EA     EM    I P  ++++  ++ +      +  E  + A +++  M++  + 
Sbjct: 345 CKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGIS 404

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
            +A T+ +L+   C+ G + +   ++ EMV
Sbjct: 405 IDAKTFDSLVNYFCNKGDLHKAAHLVDEMV 434


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 227/491 (46%), Gaps = 31/491 (6%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           +HD  T+   I    R  +L+ A  +L  M K G + D      L+  Y     + ++V 
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + D M ++G +    ++  L   +    +   A    ++M+  G +P   TY  ++ G  
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               ++ A+   + M+   I  DVV YNT+I+G  ++K MD+A  LF EM  K I P V 
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y+++I       R  DA R+  +M    + PN VT++AL+      GK+VE +K+  EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           ++R I P D   +  L+   C    L+ A  + + MI          Y  LI+ FCKA+ 
Sbjct: 355 IKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413

Query: 353 YDRAIKLLDKLVEK-------------------------EIILRPQSTLDMEAS--SYNP 385
            +  ++L  ++ ++                         +++ +   ++ +  +  +YN 
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
           ++  LC NG+  KA + F  L ++  ++P    +N +I G  K G  +  +E+   +  +
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYL-QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           GV  +  AY  +I  + RKG   +A + L  M EDG  P S  + +++ +   DG  + +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592

Query: 504 SRVMKSMVEKG 514
           + ++K M   G
Sbjct: 593 AELIKEMRSCG 603



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 239/518 (46%), Gaps = 16/518 (3%)

Query: 64  EILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           ++L  V K+N    ++     M   G+  D   + + I  + ++  +  ++ +   M +L
Sbjct: 88  KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G E  + +  +L        R   A    ++M+  G +P   T+  ++ G FL  K   A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +   + M  RG   D+VTY T++NG  +   +D A  L  +M++  IE  V+ Y T+I G
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +  DDAL +F EM +  ++P+  TY++L+  LC+ G+  +  ++L +M+ER I P 
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP- 326

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   F  L+    K G L  A  +   MI+ SI  +   Y  LI  FC  +  D A  + 
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + ++ K+    P         +Y+ +I+  C   +  +    FR++ ++G++ + V +  
Sbjct: 387 ELMISKDCF--PN------VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  +  + D+A  + K M   GV  +   Y  L++   + G+ A A    + +    
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  ++E + + G+V+    +  ++  KGV  N+     ++     +G  EEA 
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
             +  M + G +PN   +++L+      G   A+ +L+
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 213/441 (48%), Gaps = 13/441 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            L++ +    K SE      + V+R      D  T+  ++  L + G ++ A  +L  M 
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGC--QPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K  ++ D  ++  +I+   K   + +++ +F  M   G+   V +Y +L   +   GR+ 
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A R  + M+   I P   T++ ++  F    KL  A + +++M  R I  D+ TY+++I
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG+    ++DEA+ +F  M  K+  P V++Y+T+IKG+   +R ++ + +F EM    + 
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N VTYT L+ G   A      Q V ++MV   + P   +  + L G+ CK+G L  A  
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL-CKNGKLAKAMV 489

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V + + R ++  +   Y I+IE  CKA   +   +L   L  K +   P         +Y
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV--SPN------VIAY 541

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N MI   C  G   +A+   +++ + G L +   +N LIR   ++G+ +++ E++K M  
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601

Query: 443 RGVPRDADAYICLIESYLRKG 463
            G   DA   I L+ + L  G
Sbjct: 602 CGFAGDAST-IGLVTNMLHDG 621



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 221/450 (49%), Gaps = 11/450 (2%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           +  D  T   +I  L    K + A  ++  M ++G Q D   +  ++    K+G +  ++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            +   M++  +E  V  Y+ +   + +      A   F +M ++GI P   TY+ ++   
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               +   A R   DM  R I+ +VVT++ +I+ + +  K+ EAEKL+ EM +++I+P +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +Y+++I G+   +R D+A  +F+ M S D  PN VTY+ L+ G C A ++ E  ++ RE
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M +R +   +   +  L+    ++   + A  V K M+ + +      Y IL++  CK  
Sbjct: 424 MSQRGL-VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
              +A+ + + L         +ST++ +  +YN MI+ +C  G+       F  L  KGV
Sbjct: 483 KLAKAMVVFEYL--------QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534

Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             + +A+N +I G  ++G+ + A  ++K M   G   ++  Y  LI + LR G+   +  
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAE 594

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            +  M   G +  +S    ++ ++  DGR+
Sbjct: 595 LIKEMRSCGFAGDASTI-GLVTNMLHDGRL 623



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/531 (23%), Positives = 239/531 (45%), Gaps = 20/531 (3%)

Query: 123 ERSVKSYDALFKLILRRGRYMMAK-----RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ERS  S    ++ ILR     + K       F  M+     P+   +N +L       K 
Sbjct: 40  ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E  I   E M++ GIS D+ TY+  IN + R  ++  A  + A+M +   EP +++ +++
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + GY   +R  DA+ + D+M     KP+  T+T L+ GL    K  E   ++ +MV+R  
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  ++   CK G ++ A  +LK M +  I  +   Y  +I+  CK +  D A+
Sbjct: 220 QP-DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--V 415
            L  ++  K I  RP      +  +Y+ +I  LC+ G+   A      ++++ + +P  V
Sbjct: 279 NLFTEMDNKGI--RP------DVFTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPNVV 329

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            F+ LI    KEG    A ++   M +R +  D   Y  LI  +       +AK   + M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           I     P    + ++++   +  RV+    + + M ++G+  N      ++         
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           + A      M+  G  PN   ++ LL  L + GK   A+ + ++        D+ +Y  +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           ++ +  AGK  + + +   +  KG   +  + + +I+G  ++G+ ++AD L
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/557 (22%), Positives = 241/557 (43%), Gaps = 16/557 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ +  K    +  + + + M+ LG+   + +Y        RR +  +A     KM+
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G EP   T + +L G+  S ++  A+   + M   G   D  T+ T+I+G     K  
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  L  +M ++  +P +++Y T++ G       D AL +  +M+   ++ + V Y  ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC    M +   +  EM  + I P D   +  L+   C  G  + A+ +L  MI   I
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRP-DVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 +  LI+ F K      A KL D+++++ I        D +  +Y+ +I   C +
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--------DPDIFTYSSLINGFCMH 376

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A+  F  ++ K    + V ++ LI+G  K    +   E+ + M +RG+  +   Y
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI  + +  +  +A+     M+  G  P    +  +++ L ++G++  A  V + +  
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
             ++ ++     ++E +   G VE+       +   G  PN   +++++S    KG    
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A  LL        + +  +Y  ++ A L  G    A + L K M   G     S+  L+ 
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR-EASAELIKEMRSCGFAGDASTIGLVT 615

Query: 630 GLNQEGNTKQA--DILS 644
            +  +G   ++  D+LS
Sbjct: 616 NMLHDGRLDKSFLDMLS 632


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 146/620 (23%), Positives = 277/620 (44%), Gaps = 71/620 (11%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           + +VL+++Y K G V+ + ++  +M  LG+  + +  + L K +LR     +  +    M
Sbjct: 175 VLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFM 234

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
              GI P  +TY+  +     +   + A + FE+M+ R  +++ VTYN MI+G  R   +
Sbjct: 235 EGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 294

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +EA     EM +  + P   +Y  ++ G     R  +A  + DEM    +KPN V Y  L
Sbjct: 295 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTL 354

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G    GK  E   +L+EM+   + P +  ++  L+   CK G L  A+ +LK MI++ 
Sbjct: 355 VDGFMKEGKTAEAFDILKEMISAGVQP-NKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 333 I--------PTEAGH---------------------------YGILIENFCKAEMYDRAI 357
           +        P   GH                           YGI+I   C+      A 
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473

Query: 358 KLLDKLVEKEIILRPQS----------------TLDMEA-------------SSYNPMIQ 388
            LL++++ +   L+P +                +L  EA               YN +I+
Sbjct: 474 NLLEEMISEG--LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIK 531

Query: 389 HLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            L   G+  +AE ++ Q+ K+G V D   ++ LI G+ K GN + A ++++ M   G+  
Sbjct: 532 GLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKP 591

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +AD Y  L+E Y +  +     + L SM+  G  P + ++  V+ +L     ++ A  V+
Sbjct: 592 NADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVL 651

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
             + + G+  +L + + ++  L     +E+A+G +D M + G  P    +++L+      
Sbjct: 652 TEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRS 711

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G    A  + D  L +  + +  +Y  ++D     G   +A+ +  +++++G   D    
Sbjct: 712 GDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVY 771

Query: 625 DKLIAGLNQEGNTKQADILS 644
           + L  G +   + +QA  L+
Sbjct: 772 NVLATGCSDAADLEQALFLT 791



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 278/596 (46%), Gaps = 13/596 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ + L  +   E A  F   +   GL + D  T+  ++  L +  +L  A+ +L +M
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGL-SPDAFTYGALMNGLCKGSRLKEAKALLDEM 339

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G++ +  ++  L++ + K+G   E+  I   M   GV+ +   YD L + + + G+ 
Sbjct: 340 SCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQL 399

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +   +M+  G+ P   TYN ++ G F     + A     +M++ GI  +V +Y  M
Sbjct: 400 GRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIM 459

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING  +  +  EA  L  EM  + ++P    Y  +I G+        A    ++M   +V
Sbjct: 460 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV 519

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+   Y +L+ GL   G+M E ++   ++ +R + P D   +  L+   CK+G+L  A 
Sbjct: 520 HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVP-DEFTYSGLIHGYCKTGNLEKAD 578

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +L+ M+   +   A  Y  L+E + K+  Y++   +L  ++      +P + +      
Sbjct: 579 QLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD--KPDNHI------ 630

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  +I++L  +     A +   ++ K G V D   +++LI G  K  + + A  ++  M 
Sbjct: 631 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMA 690

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           + G+      Y  LI+ + R G+ + A+   DS++  G  P    + ++++   ++G + 
Sbjct: 691 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDIT 750

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--SVPNFDSLLS 559
            A  + K M+++G+  +  +   +         +E+AL   + M   G  +V  F++L+ 
Sbjct: 751 DAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVH 810

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
              ++GK     KLL   + R+ + +  + EKV+     AGK   A+ +  ++ +K
Sbjct: 811 GFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 146/339 (43%), Gaps = 33/339 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L  VG++  A      + K+G+  DE  +  LI  Y K G ++++ ++   M   G
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +  +Y  L +   +   Y         ML  G +P  H Y +++     S  +E A 
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 648

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +++  G+  D+  Y+++I+G  +   M++A  L  EM ++ +EP ++ Y  +I G+
Sbjct: 649 MVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 708

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP-- 299
                   A  +FD + +  + PN VTYTAL+ G C  G + +   + +EM++R I P  
Sbjct: 709 CRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDA 768

Query: 300 -------------------------------KDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
                                           + S+F  L+   CK G L     +L  M
Sbjct: 769 FVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVM 828

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           +   I   A     ++  F KA     A ++  +L +K+
Sbjct: 829 MDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKK 867



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 107/490 (21%), Positives = 206/490 (42%), Gaps = 40/490 (8%)

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           D +SR  S      + +++ Y +   +  A ++   M +  + PT      ++K  +   
Sbjct: 163 DHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLL--- 219

Query: 246 RADDALRIFDEMKSF----DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           RAD A+ +  ++K F     + P+  TY+  +   C A      +KV  EM  R     +
Sbjct: 220 RAD-AMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNE 278

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +  + + G+ C+SG +  A    + M+   +  +A  YG L+   CK      A  LLD
Sbjct: 279 VTYNVMISGL-CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLD 337

Query: 362 -------------------------KLVEKEIILRPQSTLDMEASS--YNPMIQHLCHNG 394
                                    K  E   IL+   +  ++ +   Y+ +I+ LC  G
Sbjct: 338 EMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIG 397

Query: 395 QTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           Q G+A    ++++K G+  D   +N L++GH ++ + D AFE++  M   G+  +  +Y 
Sbjct: 398 QLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYG 457

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            +I    + GE  +A   L+ MI +G  P + ++  ++    ++G +  A   ++ M + 
Sbjct: 458 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKA 517

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
            V  +L     +++ L   G +EEA      + + G VP+   +  L+    + G    A
Sbjct: 518 NVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKA 577

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            +LL   L      +  +Y  +L+    +       SIL  ++  G   D      +I  
Sbjct: 578 DQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRN 637

Query: 631 LNQEGNTKQA 640
           L++  N + A
Sbjct: 638 LSRSENMEVA 647



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 12/267 (4%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + +V   L  ++N E A      VE+ GL   D   +  +I  L ++  +  A  +L +M
Sbjct: 631 YGIVIRNLSRSENMEVAFMVLTEVEKNGLV-PDLHIYSSLISGLCKIADMEKAVGLLDEM 689

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K+G++     +  LI+ + + G +  +  +FD +   G+  +  +Y AL     + G  
Sbjct: 690 AKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDI 749

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   + +ML  GI P    YNV+  G   +  LE A+   E+M +RG + +V  +NT+
Sbjct: 750 TDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTL 808

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++G+ +  K+ E EKL   M ++ I P   +   ++  +    +  +A R+F E++    
Sbjct: 809 VHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKA 868

Query: 263 KPNAVTYTALL----------PGLCDA 279
             +A    +LL          P  CDA
Sbjct: 869 SQSATDRFSLLFTDMINKGLIPPKCDA 895


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 152/605 (25%), Positives = 265/605 (43%), Gaps = 42/605 (6%)

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           +N A  +   MPKKG + +E  +  LI    + G V E + IF  M++     +V++Y  
Sbjct: 20  VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           +   +   GR M A   F++M   G EP  HTY VM+       KLE   R  ++M  +G
Sbjct: 80  IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           +   V TYN +I+GY +   ++ A+++   M   +  P   +Y  +I G+   +    A+
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAM 199

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            +  +M    + P+ VTY +L+ G C  G +    ++L  M E  + P D   +   +  
Sbjct: 200 ALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVP-DQWTYSVFIDT 258

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK G +  A  +  ++    I      Y  LI+ +CKA   D A  LLD+++ ++ +  
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL-- 316

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNP 430
           P S      S+YN +I  LC   +  +A +    +++KG+   V  +  LI    KEG+ 
Sbjct: 317 PNS------STYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDF 370

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D A  I+  M   G   D   Y   I ++  +G   +A+  +  M E G  P +  +  V
Sbjct: 371 DYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLV 430

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG----------------- 533
           +++    G +  A  V+K M + G   +    + +++ LL                    
Sbjct: 431 IDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNV 490

Query: 534 ------------HVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCL 578
                         E AL   + M++ G  PN ++   L+  L + G+   A KL D   
Sbjct: 491 FFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMN 550

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
            R      A Y  +L+     G   +A  ++  +ME G +   +S + L  GL +EG+ +
Sbjct: 551 ERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKE 610

Query: 639 QADIL 643
           +A ++
Sbjct: 611 KAKVV 615



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 154/638 (24%), Positives = 281/638 (44%), Gaps = 30/638 (4%)

Query: 28  NVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           N++HG       +  +  F+ +     +   R T+  ++  L   G+   A  +  +M +
Sbjct: 44  NLIHGLCEVGRVDEGINIFKKMREDDCYPTVR-TYTVIVHALFESGRRMEAINLFSEMRE 102

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +G + +   + V+I +  K+  ++E  +I D M + G+  SV +Y+AL     + G    
Sbjct: 103 RGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEA 162

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A+   + M S    P   TYN ++ GF     +  A+     M    ++  VVTYN++I+
Sbjct: 163 AQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIH 222

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G  +   +D A +L   M E  + P   +Y+  I       R ++A  +F+ +K   +K 
Sbjct: 223 GQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKA 282

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N V YTAL+ G C AGKM +   +L  M+     P ++S +  L+   CK   +  A  +
Sbjct: 283 NEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP-NSSTYNALIDGLCKERKVQEALLL 341

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           +++MI+  +      Y ILI    K   +D A ++LD++V         S    +   Y 
Sbjct: 342 MESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV--------SSGYQPDVYIYT 393

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
             I   C  G   +AE     + ++GV+ D + +  +I  +   G  + AF+++K M   
Sbjct: 394 AFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDT 453

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTA--LDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           G       Y CLI+  L++      K     DS+         ++F + +  +++  + +
Sbjct: 454 GCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSI--------PNVFFADVADVWKMMKFE 505

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
           TA  + + M+E G   N++  AK++  L   G +  A    D M + G  P+   ++SLL
Sbjct: 506 TALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
           +   E G    AV+L+   +    +  L S   +   L   G    A  +   +++ G  
Sbjct: 566 NCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYN 625

Query: 619 TDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQ 656
            D  +   LI GL + G    +D  S ++    +RG Q
Sbjct: 626 DDEVAWKILIDGLLKNG---LSDGCSELLGVMEARGCQ 660



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 182/433 (42%), Gaps = 39/433 (9%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D+ T+   I+ L + G++  A  +   + +KG++ +E ++  LI+ Y K G + ++  + 
Sbjct: 248 DQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLL 307

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M       +  +Y+AL   + +  +   A      M+ +G++ T  TY +++      
Sbjct: 308 DRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKE 367

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              + A R  + M S G   DV  Y   I+ +     + EAE + + M E+ + P  ++Y
Sbjct: 368 GDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTY 427

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP--------------GLCDA- 279
           T +I  Y  +   + A  +   M      P+  TY+ L+                LCD+ 
Sbjct: 428 TLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSI 487

Query: 280 -----GKMVEVQKVLR---------EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
                  + +V K+++         +M+E    P  N+ + KL+   CK G L  A  + 
Sbjct: 488 PNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINT-YAKLIIGLCKVGRLGVAQKLF 546

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             M    +      Y  L+   C+  +Y  A++L+  ++E          L +   S N 
Sbjct: 547 DHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME-------HGHLPL-LESLNV 598

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVLD-PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +   L   G   KA++ F  L++ G  D  VA+  LI G  K G  D   E++ +M  RG
Sbjct: 599 LFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARG 658

Query: 445 VPRDADAYICLIE 457
                  Y  LIE
Sbjct: 659 CQIHPQTYRMLIE 671



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 67/159 (42%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G   + + +  LI    K G +  + K+FD M + GV  S   Y++L       G 
Sbjct: 514 MLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGI 573

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           Y  A R    M+  G  P   + NV+  G +     E A   F ++   G + D V +  
Sbjct: 574 YGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKI 633

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +I+G  +    D   +L   M+ +  +    +Y  +I+G
Sbjct: 634 LIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEG 672


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 139/590 (23%), Positives = 266/590 (45%), Gaps = 59/590 (10%)

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
           H   + L  P K       + +  I +Y + G    + +IF  MK+L +  ++ + + L 
Sbjct: 124 HLSILRLTSPSKA------LLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLL 177

Query: 134 KLILR---RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE----- 185
             ++R         ++  FN  +  GI P  +T+N++++G+ L  K + A+ F       
Sbjct: 178 NSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY 237

Query: 186 ------------------------------DMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
                                         DMKSRG+  +  TYN ++ GY +   + EA
Sbjct: 238 NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             +   M + N+ P V +Y  +I G     R ++A ++ DEM++  + P+ V+Y  L+ G
Sbjct: 298 ANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL-GVQCKSGHLNAAADVLKAMIRLSIP 334
             +  K+ E  K+L EM E+ + P  N+V   ++    CK G ++ A++ +  M      
Sbjct: 358 CLEWSKISEAFKLLEEMSEKGVKP--NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   Y  LI  +CKA     A + +D++  K         + M++ + N +++ LC   
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK--------NMKMDSVTLNTILRTLCREK 467

Query: 395 QTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +A        K+G  +D V++  LI G+ K+GN D A ++   M  + +      Y 
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           C+I    + G+   A + L+ ++E G  P  + + +++     +G V+ A +    MVE 
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAA 570
             K ++     +L  L M G +E+AL   +  +  G       +++L++ L ++G+   A
Sbjct: 588 SFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
             LL     ++   D  +Y  ++ AL  +G+   A   + K++EKG + D
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 158/636 (24%), Positives = 287/636 (45%), Gaps = 64/636 (10%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGK------LNHARCILLDMPKKGVQWDE 91
           HA Q F+ ++R  L    R   L    +L  + +      ++ +R    D  K G+  + 
Sbjct: 153 HAFQIFKKMKRLRL----RPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNV 208

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
           + F ++I  Y  +   +++V+  ++M +        +Y+ +   + ++GR   A+     
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMD 268

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M S G+ P R+TYN++++G+     L+ A    E M    +  DV TYN +ING     +
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           ++EA KL  EM+   + P V+SY T+I G +   +  +A ++ +EM    VKPNAVT+  
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA---------- 321
           ++   C  GKM +    + +M E    P D   +  L+   CK+G++  A          
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSP-DCVTYNTLINGYCKAGNMGEAFRTMDEMGRK 447

Query: 322 ---------ADVLKAMIR----------LSIPTEAGH------YGILIENFCKAEMYDRA 356
                      +L+ + R          LS   + G+      YG LI  + K    DRA
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           +KL D++ EKEII  P +       +YN +I  LC  G+T +A     +L++ G+L D  
Sbjct: 508 LKLWDEMKEKEII--PSTV------TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDET 559

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N ++ G+ +EG+ + AF+    M       D      L+     +G    A    ++ 
Sbjct: 560 TYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTW 619

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +  G +  +  + +++ SL ++GR+  A  ++  M EK +  +      I+ AL   G +
Sbjct: 620 VSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI 679

Query: 536 EEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
            EA   +  M++ G++P  D +L +  +K +T+   +        +      +Y + +  
Sbjct: 680 REAEEFMSKMLEKGNLP--DQVLQL--DKNETVVTSETS-----EESDSSSVAYSEWIKE 730

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           L   GK  +A  I  +  +KG   D  +   L+ GL
Sbjct: 731 LCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 190/447 (42%), Gaps = 51/447 (11%)

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC----------------DA 279
           T I  YV   +   A +IF +MK   ++PN +T   LL  L                 DA
Sbjct: 140 TAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDA 199

Query: 280 GKMVEVQKV---------------LREMVE------RYIPPKDNSVFMKLLGVQCKSGHL 318
            K+  V  V                ++ VE      +Y    DN  +  +L   CK G L
Sbjct: 200 IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRL 259

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A D+L  M    +      Y IL+  +CK      A  +++        L  Q+ L  
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE--------LMTQNNLLP 311

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMK--KGVLDPVAFNNLIRGHSKEGNPDSAFEI 436
           +  +YN +I  LC+ G+  +A    R  M+  K + D V++N LI G  +      AF++
Sbjct: 312 DVWTYNMLINGLCNEGRIEEA-FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M  +GV  +A  +  +++ Y ++G+  DA   +  M E G SP    + +++    +
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G +  A R M  M  K +K +   +  IL  L     +EEA   +    + G   +   
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           + +L+    + G    A+KL D    ++ I    +Y  ++  L   GKT  A S L +++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           E G + D  + + ++ G  +EG+ ++A
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKA 577


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 239/499 (47%), Gaps = 24/499 (4%)

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           M+ G   S K++ AI  F+ M  + I  DVVTY  +I+G  + +++ EA  LF E + K 
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMK-SFDVKPNAVTYTALLPGLCDAGKMVEV 285
             PTV++Y TMI G     R ++AL ++D+M   F  +P  VTY+ L+ GLC   ++ + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 286 QKVLREMVERYIPPKD---NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            K+L EM  R   P     N++   LLG     G    A  +L+ M     P E   +G+
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLG----QGRSKEAFSLLEQMAANGCPPELITFGL 176

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           +I+  CK    + A +++D++   E  L P      +  ++N ++  LC   +   A   
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLSP------DVITFNSVLDGLCKEQRILDAHNV 230

Query: 403 FRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           F++ +++G   + V ++ LI G SK    D A +++  M   G   +   Y  +++  L+
Sbjct: 231 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 290

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
            G   DA   L  M + G  P +  + ++++  F+  R++ A  +++ M+E G   ++  
Sbjct: 291 VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 350

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL 578
              +   L   G  +EA+  +D M   G  PN   + S++  L + G+   A+   +  +
Sbjct: 351 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK-M 409

Query: 579 GRDCII--DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
            RD ++   + +Y  ++D L  AGK   AY  L +++  G + D  +   LI GL   G 
Sbjct: 410 ARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG- 468

Query: 637 TKQADILSRMIRGEMSRGS 655
             + D    + RG   RG 
Sbjct: 469 --RIDTGLELFRGMAERGC 485



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 223/487 (45%), Gaps = 11/487 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L      E+AL  +  +     F     T+  +I+ L R  +++    +L +M
Sbjct: 68  YNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEM 127

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G   +   +  L+ +   +G  +E+  + + M   G    + ++  + K + + G  
Sbjct: 128 AGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEI 187

Query: 143 MMAKRYFNKM--LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
             A R  ++M  +  G+ P   T+N +L G     ++  A   F+    RG   +VVTY+
Sbjct: 188 EAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYS 247

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+I+G ++  KMDEA +L A+M E       ++Y+T++ G + V R +DA+ +  +M+  
Sbjct: 248 TLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 307

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+AVTY  L+ G     ++ E   +LREM+E    P     +  L    C+SG  + 
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS-VVTYTTLCHGLCRSGRFDE 366

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A ++L  M        A  Y  +++  CKA     A+   +K+   E++  P        
Sbjct: 367 AVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA-PHVI----- 420

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y+ +I  LC  G+  +A  F  ++++ G + D V F+ LI G    G  D+  E+ + 
Sbjct: 421 -AYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  RG   D   Y  L++   R     +A      M  DG SP  S  R+++  L E  R
Sbjct: 480 MAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNR 539

Query: 500 VQTASRV 506
            + A R+
Sbjct: 540 DEDAKRI 546



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 140/579 (24%), Positives = 259/579 (44%), Gaps = 54/579 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI+ L +  K++ A  +   M  K +  D   +  LI+  GK+  V+E+  +F+  +  G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKM-LSEGIEPTRHTYNVMLWGFFLSLKLETA 180
              +V +Y+ +   + + GR   A   ++ M +  G  PT  TY+ ++ G     +++  
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            +  E+M  RG + + VTYNT++N      +  EA  L  +M      P +I++  +IKG
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 241 YVAVERADDALRIFDEMKSFD--VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
                  + A R+ DEM   +  + P+ +T+ ++L GLC   ++++   V +  +ER   
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P  N V                                   Y  LI+   K    D A++
Sbjct: 241 P--NVV----------------------------------TYSTLIDGLSKMAKMDEALQ 264

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
           LL K+V  E+  R  +       +Y+ ++  L   G+   A +  RQ+   G L D V +
Sbjct: 265 LLAKMV--ELGCRANTV------TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 316

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI G  K      A  +++ M   G       Y  L     R G   +A   LD M  
Sbjct: 317 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 376

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV-EKGVKENLDLVAKILEALLMRGHVE 536
            G +P +  + S+++ L + GRV  A    + M  ++ V  ++   + +++ L   G ++
Sbjct: 377 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKID 436

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA   ++ M+++G +P+   F  L++ L + G+    ++L      R C+ D+ +Y  ++
Sbjct: 437 EAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLV 496

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK-LIAGL 631
           D L  A +   A+  LF+ M   G++  +S+ + +I GL
Sbjct: 497 DRLCRASRVDEAFD-LFQQMRSDGLSPDRSTRRTMIHGL 534



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 221/501 (44%), Gaps = 49/501 (9%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           T+  MI+ L + G++ +A  +  DM    G +     +  LI+   +   V +  K+ + 
Sbjct: 67  TYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEE 126

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M   G   +  +Y+ L   +L +GR   A     +M + G  P   T+ +++ G     +
Sbjct: 127 MAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE 186

Query: 177 LETAIRFFEDM--KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           +E A R  ++M     G+S DV+T+N++++G  + +++ +A  +F    E+   P V++Y
Sbjct: 187 IEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 246

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           +T+I G   + + D+AL++  +M     + N VTY+ ++ GL   G+M +   VLR+M +
Sbjct: 247 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 306

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P D   +  L+    K   L  A  +L+ M+          Y  L    C++  +D
Sbjct: 307 AGCLP-DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 365

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A+++LD +  +     P       A +Y+ ++  LC  G+  +A  +F ++ +  V+ P
Sbjct: 366 EAVEILDYMAARGCA--PN------AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 417

Query: 415 --VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             +A++ LI G  K G  D A+E                                    L
Sbjct: 418 HVIAYSALIDGLCKAGKIDEAYEF-----------------------------------L 442

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           + MI  G  P    F  ++  L + GR+ T   + + M E+G   ++   A +++ L   
Sbjct: 443 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRA 502

Query: 533 GHVEEALGRIDLMMQSGSVPN 553
             V+EA      M   G  P+
Sbjct: 503 SRVDEAFDLFQQMRSDGLSPD 523



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 194/423 (45%), Gaps = 19/423 (4%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD-- 115
           T+  ++  L   G+   A  +L  M   G   +   F ++I+   K+G ++ + ++ D  
Sbjct: 138 TYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM 197

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
            M + G+   V +++++   + +  R + A   F + L  G  P   TY+ ++ G     
Sbjct: 198 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 257

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           K++ A++    M   G   + VTY+T+++G  +  +M++A  +  +M++    P  ++Y 
Sbjct: 258 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 317

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           T+I G+   +R  +A+ +  EM      P+ VTYT L  GLC +G+  E  ++L  M  R
Sbjct: 318 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 377

Query: 296 YIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH---YGILIENFCKAE 351
              P  N++ +  ++   CK+G +  A    + M R  +   A H   Y  LI+  CKA 
Sbjct: 378 GCAP--NAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV--APHVIAYSALIDGLCKAG 433

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG- 410
             D A + L++++    I  P      +  +++ +I  LC  G+       FR + ++G 
Sbjct: 434 KIDEAYEFLERMIRAGRI--P------DVVTFSILINGLCDAGRIDTGLELFRGMAERGC 485

Query: 411 VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
           V D V +  L+    +    D AF++ + M   G+  D      +I   L      DAK 
Sbjct: 486 VPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKR 545

Query: 471 ALD 473
             D
Sbjct: 546 IQD 548



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 2/256 (0%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A+   R +  AG    D  T+  +I+   +  +L  A  +L +M + G       +  
Sbjct: 295 EDAVVVLRQMRDAGCL-PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTT 353

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML-SE 155
           L     + G   E+V+I D M   G   +  +Y ++   + + GR   A  YF KM   E
Sbjct: 354 LCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 413

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            + P    Y+ ++ G   + K++ A  F E M   G   DVVT++ +ING     ++D  
Sbjct: 414 VVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTG 473

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            +LF  M E+   P +++Y T++       R D+A  +F +M+S  + P+  T   ++ G
Sbjct: 474 LELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHG 533

Query: 276 LCDAGKMVEVQKVLRE 291
           L +  +  + +++  E
Sbjct: 534 LLEVNRDEDAKRIQDE 549



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 2/223 (0%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
            A+   R +  AG F+    T+  +   L R G+ + A  IL  M  +G   +   +  +
Sbjct: 331 EAVGLLREMLEAG-FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSI 389

Query: 98  IESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++   K G V E++  F+ M +   V   V +Y AL   + + G+   A  +  +M+  G
Sbjct: 390 VDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAG 449

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P   T+++++ G   + +++T +  F  M  RG   D+VTY T+++   R  ++DEA 
Sbjct: 450 RIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAF 509

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            LF +M+   + P   +  TMI G + V R +DA RI DE  S
Sbjct: 510 DLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDEENS 552


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 142/578 (24%), Positives = 261/578 (45%), Gaps = 24/578 (4%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  ++  Y + G +  + ++      + V  +  +Y  + + +  RGR   A    ++M 
Sbjct: 86  YNAMVSGYCRAGQLASARRL---AASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 154 SEGIEPTRHTYNVML---WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY-NRF 209
             G  P    Y+V+L             +A+R  +D+  RG +LDV   N ++N   ++ 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 210 KKMDEAEKLFAEMKEK-NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             +DEA +L  ++      +P V+SY  ++KG    +R      + +EM      PN VT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           +  L+  LC  G    V +VL +MV+    P D  ++  +L   CK GHL  A ++L  M
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTP-DIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               +      Y  +++  C AE +++A +LL ++ + +  L        +  ++N ++ 
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPL--------DDVTFNILVD 373

Query: 389 HLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
             C NG   +      Q+++ G V D + +  +I G  KEG  D A  ++K M   G   
Sbjct: 374 FFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRP 433

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +  +Y  +++         DA+  +  MIE G SP    F +V+  L + G V+ A  ++
Sbjct: 434 NTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELL 493

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           K M+  G   +L   + +++ L   G  +EAL  +++M+  G  PN   + S+ S LS++
Sbjct: 494 KQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKE 553

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G+    +++ D         D   Y  V+ +L   G T  A   L  ++  G + +  + 
Sbjct: 554 GRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTY 613

Query: 625 DKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKEKKQK 662
             LI GL  EG  K+A     M+    S+G+ ++   K
Sbjct: 614 TILIRGLASEGFVKEA---QEMLTELCSKGALRKHFMK 648



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 202/460 (43%), Gaps = 11/460 (2%)

Query: 22  DHNLVYNVLHGAKNS-EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + NLV N +     S + AL+  R +  +   + D  ++  +++ L    +    + ++ 
Sbjct: 190 NCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLME 249

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M + G   +   F  LI    + G+ +   ++   M   G    ++ Y  +   + + G
Sbjct: 250 EMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEG 309

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
              +A    ++M S G++P    YN +L G   + + E A     +M      LD VT+N
Sbjct: 310 HLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFN 369

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +++ + +   +    +L  +M E    P VI+YTT+I G+      D+A+ +   M + 
Sbjct: 370 ILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC 429

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             +PN ++YT +L GLC A + V+ + ++ +M+E+   P +   F  ++   CK G +  
Sbjct: 430 GCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP-NPVTFNTVINFLCKKGLVEQ 488

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A ++LK M+      +   Y  +I+   KA   D A++LL+ +V K   + P + +    
Sbjct: 489 AIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG--MSPNTII---- 542

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
             Y+ +   L   G+  +    F  +    +  D V +N +I    K G  D A E +  
Sbjct: 543 --YSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAY 600

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           M   G   +   Y  LI     +G   +A+  L  +   G
Sbjct: 601 MVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 174/393 (44%), Gaps = 14/393 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  L R G       +L  M   G   D  M+  +++   K+G ++ + +I D M
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G++ +V  Y+ + K +    R+  A+    +M          T+N+++  F  +  +
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLV 381

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
              I   E M   G   DV+TY T+ING+ +   +DEA  L   M      P  ISYT +
Sbjct: 382 YRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIV 441

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +KG  + ER  DA  +  +M      PN VT+  ++  LC  G + +  ++L++M+    
Sbjct: 442 LKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGC 501

Query: 298 PPK--DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            P     S  +  LG   K+G  + A ++L  M+   +      Y  +     K    +R
Sbjct: 502 SPDLISYSTVIDGLG---KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINR 558

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
            I++ D +  +++ +R  + L      YN +I  LC  G T +A  F   ++  G + + 
Sbjct: 559 VIQMFDNI--QDVTIRSDAVL------YNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNE 610

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
             +  LIRG + EG    A E++  +  +G  R
Sbjct: 611 STYTILIRGLASEGFVKEAQEMLTELCSKGALR 643



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/383 (21%), Positives = 158/383 (41%), Gaps = 22/383 (5%)

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           +AL+  LC AG+  E  + L     R         +  ++   C++G L A+A  L A +
Sbjct: 53  SALIRSLCAAGRTAEAARALSAAAARGG--AGVVAYNAMVSGYCRAGQL-ASARRLAASV 109

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
              +P  A  Y  ++   C       A+ +LD++  +     P          Y+ +++ 
Sbjct: 110 --PVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIP--------PMYHVILEA 159

Query: 390 LCHNGQTG---KAEIFFRQLMKKGVLDPVAFNNLIRGH--SKEGNPDSAFEIVKIMGRR- 443
            C  G  G    A    + L  +G    V   NL+      + G+ D A  +++ +    
Sbjct: 160 ACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSF 219

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   D  +Y  +++           +  ++ M+  G  P    F +++  L  +G  +  
Sbjct: 220 GCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERV 279

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
            +V+  MV+ G   ++ + A +L+ +   GH+E A   +D M   G  PN   ++++L  
Sbjct: 280 HQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKG 339

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L    +   A +LL      DC +D  ++  ++D     G       +L +++E G V D
Sbjct: 340 LCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPD 399

Query: 621 WKSSDKLIAGLNQEGNTKQADIL 643
             +   +I G  +EG   +A +L
Sbjct: 400 VITYTTVINGFCKEGLIDEAVML 422



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 128/272 (47%), Gaps = 16/272 (5%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           +I+ LC  G+T +A         +G    VA+N ++ G+ + G   SA    ++     V
Sbjct: 55  LIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASAR---RLAASVPV 111

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME---SLFEDGRVQT 502
           P +A  Y  ++ +   +G  ADA + LD M   G +P   ++  ++E   S    G  ++
Sbjct: 112 PPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRS 171

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMR-GHVEEALGRI-DLMMQSGSVPNFDSLLSV 560
           A RV++ +  +G   ++     +L A+  + G V+EAL  + DL    G  P+  S  +V
Sbjct: 172 AVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAV 231

Query: 561 LSEKGKTIA-----AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           L  KG  +A        L++  +   C  ++ ++  ++  L   G     + +L ++++ 
Sbjct: 232 L--KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH 289

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           G   D +    ++ G+ +EG+ + A +IL RM
Sbjct: 290 GCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 257/541 (47%), Gaps = 38/541 (7%)

Query: 105 GIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT 163
           G +   V++FD + +Q G + SV +Y+     + +     +A   F +M   G  P   T
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
           Y+++L G   + +L+ A      ++  G+ L+V+TY+ +I+G  +  ++D+A ++F  M 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 224 E-KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
                 P V+++ +++KG  + ER  +A  +F+ M     +PN ++Y+ LL GLC AG++
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E  ++  EMVE+   P D   +   +   CK+  +  A D  + M+      +A  +  
Sbjct: 196 DEACRLWEEMVEKSCVP-DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFST 254

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           +I   CK    + A                           N MI+HLC +G   +A   
Sbjct: 255 VIGILCKKGHAEEA--------------------------QNQMIEHLCRSGMLDEACKT 288

Query: 403 FRQLMKKGVLDPVA--FNNLIRGHSKEGN-PDSA--FEIVKIMGRRGVPRDADAYICLIE 457
           F +++ +    P A  FN LI    K    PD    F+ +K M     P + + Y  +++
Sbjct: 289 FEEMISRN-HPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVD 347

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
           +  +  +  +A+  ++ M   G SP    + ++++ L + G++  A  +++ M ++GV  
Sbjct: 348 NLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFP 407

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           +    A IL AL   G V+ AL  ++ M   GS P+   +++LL  L + G+   A+  L
Sbjct: 408 DSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFL 467

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
              +   C  D+ SY  ++ AL  +G+   A++I  +++++G + D      L+ GL + 
Sbjct: 468 AKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARN 527

Query: 635 G 635
           G
Sbjct: 528 G 528



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/580 (24%), Positives = 265/580 (45%), Gaps = 33/580 (5%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +KG Q     +   +++  K    Q + + F  M++ G      +Y  + + + + G   
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL-DVVTYNTM 202
            AK    ++   G++    TY+V++ G   + +++ A+  F+ M + G  + DVVT+N++
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           + G    ++M EA  LF  M +   EP VISY+T++ G     R D+A R+++EM     
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH----- 317
            P+ V YT+ + GLC A ++ E     R+MV +     D   F  ++G+ CK GH     
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG-SKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 318 ------------LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
                       L+ A    + MI  + P  A  +  LI   CK++     + L  ++  
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329

Query: 366 -KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
            KE    P         +YN M+ +LC   Q  +A+    ++   G+  D V ++ L+ G
Sbjct: 330 MKEFYCPPN------LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K G  D A ++++ M + GV  D+     ++ +  + G+   A + L++M   G +P 
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + ++++ L + GR+  A   +  MV      ++     I+ AL   G    A     
Sbjct: 444 LVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQ 503

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M++ G +P+   + SLL  L+  G    A++LL   L   C  D   ++ V+D L  AG
Sbjct: 504 EMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVVDGLCKAG 560

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           K  +A  ++ ++ + G   D  +   ++ GL + G   +A
Sbjct: 561 KAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKA 600



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 140/596 (23%), Positives = 239/596 (40%), Gaps = 138/596 (23%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N   + L  A   + A + F+ ++R G +  D  T+  ++  L + G+L+ A+ +L 
Sbjct: 39  FTYNCFLDALAKANAGQLAYEKFQQMQRRG-YPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-------------------------- 114
            + + GV+ +   + V+I+   K   V ++++IF                          
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSG 157

Query: 115 ----------DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
                     + M + G E +V SY  L   + + GR   A R + +M+ +   P    Y
Sbjct: 158 ERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAY 217

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT-----------------MINGYN 207
              + G   + ++  A      M ++G   D V ++T                 MI    
Sbjct: 218 TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLC 277

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS---FDVKP 264
           R   +DEA K F EM  +N  P+   + T+I      +R  D + +F  MKS   F   P
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N  TY  ++  LC A ++ E Q+++ EM    + P D   +  L+   CK G L+ A D+
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP-DVVTYSALVDGLCKLGKLDRACDL 396

Query: 325 LKAMIR-------------LSIPTEAGH----------------------YGILIENFCK 349
           L+ M +             L+  ++AG                       Y  L++  CK
Sbjct: 397 LEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCK 456

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
           A   D AI  L K+V        + T D+   SY  +I  LC +GQ   A   F++++K+
Sbjct: 457 AGRIDEAITFLAKMVA------AKCTPDV--FSYTIIITALCRSGQAAGAHAIFQEMVKR 508

Query: 410 GVL-DPVAFNNLIRGHSKEG--------------NPD------------------SAFEI 436
           GVL D V +++L+ G ++ G               PD                   A E+
Sbjct: 509 GVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEV 568

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           V+ M   G P DA  YI ++    + G+   A+     +++D     +S+ R  ME
Sbjct: 569 VERMADAGFPADAFTYINVVRGLRKLGKVDKAR----QLVDDASETHTSVERLSME 620


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 239/510 (46%), Gaps = 51/510 (10%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR-----YMMAKR 147
           +F+++++S  + G V +++ +  +  + G   +V SY+A+   +LRR       Y  A+R
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
            F  M+  G+ P  +TYNV++ G      LE  + F   M+  GIS +VVTYNT+I+   
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           + KK+ EA  L   M    +   +ISY ++I G     R  +   + +EM+   + P+ V
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           TY  L+ G C  G + +   +L EMV + + P +   +  L+   CK+G+L+ A ++   
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSP-NVVTYTTLINCMCKAGNLSRAVEIFDQ 372

Query: 328 M-IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV---------------------- 364
           M +R   P E   Y  LI+ FC+  + + A K+L +++                      
Sbjct: 373 MRVRGLRPNERT-YTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG 431

Query: 365 ---EKEIILRP--QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
              E   ILR   +  L  +  SY+ +I   C   + GKA     ++++KGVL D V ++
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYS 491

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           +LI+G   +     AF++ + M RRG+P D   Y  LI +Y   GE + A    D M++ 
Sbjct: 492 SLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVM---------------KSMVEKGVKENLDLVA 523
           G  P +  +  ++  L +  R + A R++                +++E         V 
Sbjct: 552 GFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVE 611

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            +++   M+G + EA      M+Q    PN
Sbjct: 612 GLVKGFCMKGLMNEADRVFKTMLQRNHKPN 641



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 211/456 (46%), Gaps = 13/456 (2%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+++    ++ +M  KG+  DE  +  L+  + K+G + + + +   M   G+  +V +Y
Sbjct: 291 GRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTY 350

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             L   + + G    A   F++M   G+ P   TY  ++ GF     +  A +   +M  
Sbjct: 351 TTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIV 410

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G S  VVTYN +++GY    ++ EA  +   M E+ + P V+SY+T+I G+        
Sbjct: 411 SGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGK 470

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A ++ +EM    V P+ VTY++L+ GLC   K+VE   + REM+ R +PP D   +  L+
Sbjct: 471 AFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPP-DEVTYTSLI 529

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G L+ A  +   M++     +   Y +LI    K      A +LL KL  +E +
Sbjct: 530 NAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV 589

Query: 370 LRP---------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
             P         ++  + E  S   +++  C  G   +A+  F+ ++++      A  NL
Sbjct: 590 --PDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNL 647

Query: 421 -IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            I GHS+ GN   A+ +   +          A I L+++  R+G   +    L +++   
Sbjct: 648 MIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSC 707

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
               + + + ++E  F++G +     V+  M + G+
Sbjct: 708 RLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGL 743



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 234/524 (44%), Gaps = 55/524 (10%)

Query: 21  FDHNLVYNVLHGAKNSEH-----ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
             +N V + L    +S H     A + FR + R G+ + +  T+  +I  +   G L   
Sbjct: 168 LSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGV-SPNVYTYNVIIRGVVSQGDLEKG 226

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
              +  M K+G+  +   +  LI++  KK  V+E++ +   M   GV  ++ SY+++   
Sbjct: 227 LGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVING 286

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           +  +GR         +M  +G+ P   TYN ++ GF     L   +    +M  +G+S +
Sbjct: 287 LCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPN 346

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VVTY T+IN   +   +  A ++F +M+ + + P   +YTT+I G+      ++A ++  
Sbjct: 347 VVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLS 406

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM      P+ VTY AL+ G C  G++ E   +LR MVER +PP                
Sbjct: 407 EMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPP---------------- 450

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
                  DV+              Y  +I  FC+     +A ++ +++VEK ++  P + 
Sbjct: 451 -------DVVS-------------YSTVIAGFCRERELGKAFQMKEEMVEKGVL--PDTV 488

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
                 +Y+ +IQ LC   +  +A   FR++M++G+  D V + +LI  +  +G    A 
Sbjct: 489 ------TYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKAL 542

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +   M +RG   D   Y  LI    +K     AK  L  +  +   P    + +++E+ 
Sbjct: 543 RLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENC 602

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
             +   ++   ++K    KG+    D   ++ + +L R H   A
Sbjct: 603 -SNNEFKSVEGLVKGFCMKGLMNEAD---RVFKTMLQRNHKPNA 642


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 158/647 (24%), Positives = 293/647 (45%), Gaps = 58/647 (8%)

Query: 1   MAERAWTTRLQNKIRALVPQ-FDHNLV-YNVL-HGAKNSE---HALQFFRWVERAGLFNH 54
           M E     R + KIR +    FD ++V YNVL HG    +    A++  R +   GL   
Sbjct: 235 MCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGL-AA 293

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++    R+ +      ++ +M + G    E     L++   K+G + ++ ++ 
Sbjct: 294 DVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELV 353

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             + + G   ++  Y+AL   + + G    A+  ++ M    + P   TY++++  F  S
Sbjct: 354 VKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRS 413

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +L+ AI +F+ M   GI   V  YN++ING  +F  +  AE LF EM  K +EPT  ++
Sbjct: 414 GRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTF 473

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           T++I GY    +   A +++++M    + PN  T+TAL+ GLC   KM E  ++  E+VE
Sbjct: 474 TSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVE 533

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R I P + +                                    Y +LIE +C+    D
Sbjct: 534 RKIKPTEVT------------------------------------YNVLIEGYCRDGKID 557

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
           +A +LL+ + +K ++  P      +  +Y P+I  LC  G+  KA+ F   L K+ V L+
Sbjct: 558 KAFELLEDMHQKGLV--P------DTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLN 609

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + ++ L+ G+ +EG    A      M +RG+  D   +  LI+  L++ +       L 
Sbjct: 610 EMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLK 669

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M + G  P + ++ S++++  ++G  + A      MV +    N+     ++  L   G
Sbjct: 670 DMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAG 729

Query: 534 HVEEALGRIDLMMQSGSVP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
            ++ A G +   MQ+ +VP     +   L  L+++G    A+ L    L +  + +  ++
Sbjct: 730 EMDRA-GLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTH 787

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
             ++      G+   A  +L ++ E G   D  +   LI    + GN
Sbjct: 788 NIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGN 834



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 151/722 (20%), Positives = 301/722 (41%), Gaps = 115/722 (15%)

Query: 16  ALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR------- 68
            L P     ++ N L  AK    AL+FF ++      NH   ++  M+  L         
Sbjct: 66  TLRPHHVEQVLMNTLDDAK---LALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPA 122

Query: 69  -------VGKLNHARCIL---LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
                  + + +H +C+    LD  K+        F +L+++Y     + ++V I  +M 
Sbjct: 123 NSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMF 182

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT--------------- 163
              +   V++  AL   +L+  +++     F++ ++ G+ P  +T               
Sbjct: 183 ANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFL 242

Query: 164 --------------------YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
                               YNV++ G     ++  A+     +  +G++ DVVTY T++
Sbjct: 243 RAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLV 302

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR----------- 252
            G+ R ++ +   +L  EM E    PT  + + ++ G     + DDA             
Sbjct: 303 LGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFV 362

Query: 253 ------------------------IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
                                   ++  M   +++PN +TY+ L+   C +G++      
Sbjct: 363 PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISY 422

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
              M++  I  +    +  L+  QCK G L+AA  +   M    +   A  +  LI  +C
Sbjct: 423 FDRMIQDGI-GETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYC 481

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K     +A KL +K+++  I   P         ++  +I  LC   +  +A   F +L++
Sbjct: 482 KDLQVQKAFKLYNKMIDNGIT--PN------VYTFTALISGLCSTNKMAEASELFDELVE 533

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           + +    V +N LI G+ ++G  D AFE+++ M ++G+  D   Y  LI      G  + 
Sbjct: 534 RKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSK 593

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           AK  +D + +         + +++    ++GR+  A      M+++G+  N+DLV     
Sbjct: 594 AKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI--NMDLVC---H 648

Query: 528 ALLMRGHVEEALGR--IDL---MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLG 579
           A+L+ G +++   +   DL   M   G  P+   + S++   S++G    A +  D  + 
Sbjct: 649 AVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVT 708

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTK 638
            +C  ++ +Y  +++ L  AG+ ++   +LFK M+   V  +  +    +  L +EGN K
Sbjct: 709 EECFPNVVTYTALMNGLCKAGE-MDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMK 767

Query: 639 QA 640
           +A
Sbjct: 768 EA 769



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 221/524 (42%), Gaps = 79/524 (15%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + G L+ A  +  +M    ++ +   + +LI+S+ + G +  ++  FD M Q G
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V +Y++L     + G    A+  F +M ++G+EPT  T+  ++ G+   L+++ A 
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAF 490

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + +  M   GI+ +V T+  +I+G     KM EA +LF E+ E+ I+PT ++Y  +I+GY
Sbjct: 491 KLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGY 550

Query: 242 VAVERADDALRIFDEM----------------------------KSF-------DVKPNA 266
               + D A  + ++M                            K F       +VK N 
Sbjct: 551 CRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNE 610

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYI-----------------PPK--------- 300
           + Y+ALL G C  G+++E      EM++R I                 P +         
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKD 670

Query: 301 --------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
                   DN ++  ++    K G    A +    M+          Y  L+   CKA  
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGE 730

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            DRA  L  ++    +   P +++     +Y   + +L   G   +A I     M KG+L
Sbjct: 731 MDRAGLLFKRMQAANV---PPNSI-----TYGCFLDNLTKEGNMKEA-IGLHHAMLKGLL 781

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            + V  N +IRG  K G    A +++  M   G+  D   Y  LI  Y R G    +   
Sbjct: 782 ANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKL 841

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            D+M+  G  P    +  ++     +G +  A  +   M+ +G+
Sbjct: 842 WDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGI 885



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 185/393 (47%), Gaps = 13/393 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  L    K+  A  +  ++ ++ ++  E  + VLIE Y + G + ++ ++ + M
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            Q G+     +Y  L   +   GR   AK + + +  + ++     Y+ +L G+    +L
Sbjct: 567 HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRL 626

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+    +M  RGI++D+V +  +I+G  +         L  +M ++ + P  + YT+M
Sbjct: 627 MEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSM 686

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  Y        A   +D M + +  PN VTYTAL+ GLC AG+M     + + M    +
Sbjct: 687 IDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANV 746

Query: 298 PPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           PP  NS+ +   L    K G++  A  +  AM++  +     H  I+I  FCK   +  A
Sbjct: 747 PP--NSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTH-NIIIRGFCKLGRFHEA 803

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
            K+L ++ E  I   P      +  +Y+ +I   C +G  G +   +  ++ +G+  D V
Sbjct: 804 TKVLSEMTENGIF--P------DCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLV 855

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           A+N LI G    G  D AFE+   M RRG+  D
Sbjct: 856 AYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/451 (23%), Positives = 195/451 (43%), Gaps = 46/451 (10%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + G L+ A  + ++M  KGV+     F  LI  Y K   VQ++ K+++ M   G+  +V 
Sbjct: 447 KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVY 506

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           ++ AL   +    +   A   F++++   I+PT  TYNV++ G+    K++ A    EDM
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA---- 243
             +G+  D  TY  +I+G     ++ +A+    ++ ++N++   + Y+ ++ GY      
Sbjct: 567 HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRL 626

Query: 244 ----------VERA------------DDALRIFDEMKSFDV---------KPNAVTYTAL 272
                     ++R             D AL+  D    FD+         +P+ V YT++
Sbjct: 627 MEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSM 686

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +      G   +  +    MV     P +   +  L+   CK+G ++ A  + K M   +
Sbjct: 687 IDTYSKEGSFKKAFECWDLMVTEECFP-NVVTYTALMNGLCKAGEMDRAGLLFKRMQAAN 745

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +P  +  YG  ++N  K      AI L   +++          L     ++N +I+  C 
Sbjct: 746 VPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKG---------LLANTVTHNIIIRGFCK 796

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+  +A     ++ + G+  D V ++ LI  + + GN  ++ ++   M  RG+  D  A
Sbjct: 797 LGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVA 856

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           Y  LI      GE   A    D M+  G  P
Sbjct: 857 YNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/525 (22%), Positives = 229/525 (43%), Gaps = 22/525 (4%)

Query: 133 FKLILRRGRYMMAKRYFNK------MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           F L+++   Y+++ R F+       M +  + P   T + +L G     K  T    F++
Sbjct: 158 FNLLVQN--YVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDE 215

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
             + G+  D  T + ++      K    A++    M+    + ++++Y  +I G    +R
Sbjct: 216 SVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDR 275

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
             +A+ +   +    +  + VTY  L+ G C   +     +++ EMVE    P + +V  
Sbjct: 276 VSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSG 335

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            + G++ K G ++ A +++  + R         Y  LI + CK    D+A  L   +   
Sbjct: 336 LVDGLR-KQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNM--S 392

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHS 425
            + LRP         +Y+ +I   C +G+   A  +F ++++ G+ + V A+N+LI G  
Sbjct: 393 LMNLRPNGI------TYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQC 446

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K G+  +A  +   M  +GV   A  +  LI  Y +  +   A    + MI++G +P   
Sbjct: 447 KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVY 506

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            F +++  L    ++  AS +   +VE+ +K        ++E     G +++A   ++ M
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
            Q G VP+   +  L+S L   G+   A   +D    ++  ++   Y  +L      G+ 
Sbjct: 567 HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRL 626

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAG-LNQEGNTKQADILSRM 646
           + A S   +++++G   D      LI G L Q       D+L  M
Sbjct: 627 MEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDM 671



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 116/230 (50%), Gaps = 2/230 (0%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L DM  +G++ D  ++  +I++Y K+G  +++ + +D+M       +V +Y AL   + 
Sbjct: 667 LLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLC 726

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G    A   F +M +  + P   TY   L        ++ AI     M  +G+  + V
Sbjct: 727 KAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTV 785

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           T+N +I G+ +  +  EA K+ +EM E  I P  ++Y+T+I  Y        +++++D M
Sbjct: 786 THNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTM 845

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +  ++P+ V Y  L+ G C  G++ +  ++  +M+ R I P DN    K
Sbjct: 846 LNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP-DNKYLQK 894


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 257/541 (47%), Gaps = 38/541 (7%)

Query: 105 GIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT 163
           G +   V++FD + +Q G + SV +Y+     + +     +A   F +M   G  P   T
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
           Y+++L G   + +L+ A      ++  G+ L+V+TY+ +I+G  +  ++D+A ++F  M 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 224 E-KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
                 P V+++ +++KG  + ER  +A  +F+ M     +PN ++Y+ LL GLC AG++
Sbjct: 136 SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E  ++  EMVE+   P D   +   +   CK+  +  A D  + M+      +A  +  
Sbjct: 196 DEACRLWEEMVEKSCVP-DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFST 254

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           +I   CK    + A                           N MI+HLC +G   +A   
Sbjct: 255 VIGILCKKGHAEEA--------------------------QNQMIEHLCRSGMLDEACKT 288

Query: 403 FRQLMKKGVLDPVA--FNNLIRGHSKEGN-PDSA--FEIVKIMGRRGVPRDADAYICLIE 457
           F +++ +    P A  FN LI    K    PD    F+ +K M     P + + Y  +++
Sbjct: 289 FEEMISRN-HPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVD 347

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
           +  +  +  +A+  ++ M   G SP    + ++++ L + G++  A  +++ M ++GV  
Sbjct: 348 NLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFP 407

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           +    A IL AL   G V+ AL  ++ M   GS P+   +++LL  L + G+   A+  L
Sbjct: 408 DSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFL 467

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
              +   C  D+ SY  ++ AL  +G+   A++I  +++++G + D      L+ GL + 
Sbjct: 468 AKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARN 527

Query: 635 G 635
           G
Sbjct: 528 G 528



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/580 (25%), Positives = 266/580 (45%), Gaps = 33/580 (5%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +KG Q     +   +++  K    Q + + F  M++ G      +Y  + + + + G   
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL-DVVTYNTM 202
            AK    ++   G++    TY+V++ G   + +++ A+  F+ M S G  + DVVT+N++
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           + G    ++M EA  LF  M +   EP VISY+T++ G     R D+A R+++EM     
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH----- 317
            P+ V YT+ + GLC A ++ E     R+MV +     D   F  ++G+ CK GH     
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG-SKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 318 ------------LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
                       L+ A    + MI  + P  A  +  LI   CK++     + L  ++  
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329

Query: 366 -KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
            KE    P         +YN M+ +LC   Q  +A+    ++   G+  D V ++ L+ G
Sbjct: 330 MKEFYCPPN------LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K G  D A ++++ M + GV  D+     ++ +  + G+   A + L++M   G +P 
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + ++++ L + GR+  A   +  MV      ++     I+ AL   G    A     
Sbjct: 444 LVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQ 503

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M++ G +P+   + SLL  L+  G    A++LL   L   C  D   ++ VLD L  AG
Sbjct: 504 EMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVLDGLCKAG 560

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           K  +A  ++ ++ + G   D  +   +++GL + G   +A
Sbjct: 561 KAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKA 600



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 140/596 (23%), Positives = 239/596 (40%), Gaps = 138/596 (23%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N   + L  A   + A + F+ ++R G +  D  T+  ++  L + G+L+ A+ +L 
Sbjct: 39  FTYNCFLDALAKANAGQLAYEKFQQMQRRG-YPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-------------------------- 114
            + + GV+ +   + V+I+   K   V ++++IF                          
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSG 157

Query: 115 ----------DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
                     + M + G E +V SY  L   + + GR   A R + +M+ +   P    Y
Sbjct: 158 ERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAY 217

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT-----------------MINGYN 207
              + G   + ++  A      M ++G   D V ++T                 MI    
Sbjct: 218 TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLC 277

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS---FDVKP 264
           R   +DEA K F EM  +N  P+   + T+I      +R  D + +F  MKS   F   P
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N  TY  ++  LC A ++ E Q+++ EM    + P D   +  L+   CK G L+ A D+
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP-DVVTYSALVDGLCKLGKLDRACDL 396

Query: 325 LKAMIR-------------LSIPTEAGH----------------------YGILIENFCK 349
           L+ M +             L+  ++AG                       Y  L++  CK
Sbjct: 397 LEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCK 456

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
           A   D AI  L K+V        + T D+   SY  +I  LC +GQ   A   F++++K+
Sbjct: 457 AGRIDEAITFLAKMVA------AKCTPDV--FSYTIIITALCRSGQAAGAHAIFQEMVKR 508

Query: 410 GVL-DPVAFNNLIRGHSKEG--------------NPD------------------SAFEI 436
           GVL D V +++L+ G ++ G               PD                   A E+
Sbjct: 509 GVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEV 568

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           V+ M   G P DA  YI ++    + G+   A+     +++D     +S+ R  ME
Sbjct: 569 VERMADAGFPADAFTYISVVSGLRKLGKVDKAR----QLVDDASETHTSVERLSME 620


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 222/493 (45%), Gaps = 10/493 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+    ++G +  A   +  + + G+  D   +  LI  Y +   V  + K+F++M   G
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
             R+  SY  +   +   GR       F KM  +   PT  TY V++   F + +    +
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F +M+ R    +V TY  M++   + +K+DE+ ++  EM EK + P+V++Y  +I+GY
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R + AL I   M+S + +PN  TY  L+ G      + +   +L +M+E  + P  
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+ VQCK+GH ++A  +L  +    +  +   Y + I+  CK++  + A  L +
Sbjct: 460 -VTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFN 518

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            L EK I              Y  +I   C  G+  +A     ++  +  L +   +N+L
Sbjct: 519 SLKEKGI--------KANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSL 570

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  KEG       +V+ M + GV      Y  LIE  LR+G+   A    + M+  GH
Sbjct: 571 IYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGH 630

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    + + + +    G V+ A  +M  M+E GV  +      ++ A    G   +A  
Sbjct: 631 KPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFN 690

Query: 541 RIDLMMQSGSVPN 553
            +  M+ +G  P+
Sbjct: 691 VLKRMLDAGCDPS 703



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 156/638 (24%), Positives = 284/638 (44%), Gaps = 77/638 (12%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVE--RAGLFNHDRETHLKMIEIL- 66
            Q  I  L P    +L  N  H   N   ALQFF  +   + G F H  ++H  +++IL 
Sbjct: 75  FQKLIPNLSPSHVSSLFNN--HPDLNPNIALQFFNSLPLIKPG-FKHTVKSHSFLLKILI 131

Query: 67  -------GRVGKLNHAR-CI-------LLDMPKKGVQWDEDM-FEVLIESYGKKGIVQES 110
                  G   +++  + C+       LLD  ++  + D D+ F++ + SY +  ++   
Sbjct: 132 PNNLFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLAR 191

Query: 111 VKIFDIMKQLGVE-------RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT 163
             + D MK++  E        ++ + + +     + G  + A  Y +K+   G+ P   T
Sbjct: 192 FLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFT 251

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
           Y  ++ G+  +  + +A + F  M ++G   + V+Y T+I+G     ++DE   LF +M+
Sbjct: 252 YTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMR 311

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           E +  PTV +YT +I      +R  + + +F+EM+    +PN  TYT ++  +C   K+ 
Sbjct: 312 EDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLD 371

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL------------------ 325
           E +++L EM+E+ + P     +  L+   C+ G + AA ++L                  
Sbjct: 372 ESRRILNEMMEKGLVPSV-VTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNEL 430

Query: 326 -----------KAMIRLSIPTEAG------HYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
                      KAM  LS   E+        Y  LI   CKA  +D A KLLD L E  +
Sbjct: 431 ICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGL 490

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           +         +  +Y+  I  LC + +  +A   F  L +KG+  + V +  LI GH K 
Sbjct: 491 V--------PDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKA 542

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G  D A  +++ M       ++  Y  LI    ++G+  +  + +++M + G  P  + +
Sbjct: 543 GKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATY 602

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++E +  +G    A+RV   MV  G K ++      +      G+V+EA G +  M++
Sbjct: 603 TILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIE 662

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           +G +P+   +  L+S     G    A  +L   L   C
Sbjct: 663 AGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/515 (25%), Positives = 224/515 (43%), Gaps = 15/515 (2%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           +R +T  L + I   VP  +  N + N      N   A  +   + +AGL + D  T+  
Sbjct: 199 KRVYTEMLNDMI---VPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGL-SPDSFTYTS 254

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I    R   +N A  +   MP KG + +E  +  +I    + G + E + +F  M++  
Sbjct: 255 LILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD 314

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +V++Y  +   +    R +     FN+M     EP  HTY VM+       KL+ + 
Sbjct: 315 CYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESR 374

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R   +M  +G+   VVTYN +I GY    +++ A ++   M+  N  P   +Y  +I G+
Sbjct: 375 RILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGF 434

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +    A+ +  +M    + P+ VTY +L+   C AG      K+L  + E  + P D
Sbjct: 435 SKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVP-D 493

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +   +   CKS  +  A D+  ++    I      Y  LI+  CKA   D AI LL+
Sbjct: 494 QWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLE 553

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNL 420
           ++  ++ +  P S      S+YN +I  +C  G+  +       + K GV   VA +  L
Sbjct: 554 RMHSEDCL--PNS------STYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTIL 605

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I    +EG+ D A  +   M   G   D   Y   I +Y   G   +A+  +  MIE G 
Sbjct: 606 IEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGV 665

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            P S  +  ++ +    G    A  V+K M++ G 
Sbjct: 666 MPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/448 (20%), Positives = 190/448 (42%), Gaps = 42/448 (9%)

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           L V +YN ++    RF  +DE ++++ EM    I P + +  TM+  Y  +    +A   
Sbjct: 177 LSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLY 236

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
             ++    + P++ TYT+L+ G C    +    KV   M  +     + S    + G+ C
Sbjct: 237 VSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGL-C 295

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           ++G ++    + K M           Y ++I      +     + L +++ E+       
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRER------- 348

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDS 432
            + +    +Y  M+  +C   +  ++     ++M+KG++  V  +N LIRG+ +EG  ++
Sbjct: 349 -SCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEA 407

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A EI+ +M       +   Y  LI  + ++     A T L  M+E   +P+   + S++ 
Sbjct: 408 ALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIH 467

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
              + G   +A +++  + E G+  +    +  ++ L     +EEA              
Sbjct: 468 VQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEAC------------- 514

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
               L + L EKG  I A +++              Y  ++D    AGK   A S+L ++
Sbjct: 515 ---DLFNSLKEKG--IKANEVM--------------YTALIDGHCKAGKIDEAISLLERM 555

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             +  + +  + + LI G+ +EG  ++ 
Sbjct: 556 HSEDCLPNSSTYNSLIYGVCKEGKVQEG 583



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 109/242 (45%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I +  + G  + A  +L  + + G+  D+  + V I++  K   ++E+  +F+ +
Sbjct: 461 TYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL 520

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+ G++ +   Y AL     + G+   A     +M SE   P   TYN +++G     K+
Sbjct: 521 KEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKV 580

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           +  +   E+M   G+   V TY  +I    R    D A ++F +M     +P V +YT  
Sbjct: 581 QEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  Y       +A  +   M    V P+++TYT L+      G   +   VL+ M++   
Sbjct: 641 IHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700

Query: 298 PP 299
            P
Sbjct: 701 DP 702



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 2/258 (0%)

Query: 17  LVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
           L P    +N + +V   A + + A +    ++  GL   D+ T+   I+ L +  ++  A
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVP-DQWTYSVFIDTLCKSKRMEEA 513

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             +   + +KG++ +E M+  LI+ + K G + E++ + + M       +  +Y++L   
Sbjct: 514 CDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYG 573

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           + + G+          M   G++PT  TY +++         + A R F  M S G   D
Sbjct: 574 VCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPD 633

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           V TY   I+ Y     + EAE + A M E  + P  ++YT +I  Y  +  A DA  +  
Sbjct: 634 VYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLK 693

Query: 256 EMKSFDVKPNAVTYTALL 273
            M      P+   +  L+
Sbjct: 694 RMLDAGCDPSHPIWNNLI 711



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 4/196 (2%)

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           ++ +Y + G   +A   +  + + G SP S  + S++     +  V +A +V   M  KG
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
            + N      I+  L   G ++E +     M +    P    +  ++  L    + +  +
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            L +    R C  ++ +Y  ++DA+    K   +  IL ++MEKG V    + + LI G 
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399

Query: 632 NQEGNTKQA-DILSRM 646
            +EG  + A +IL  M
Sbjct: 400 CEEGRIEAALEILGLM 415



 Score = 42.7 bits (99), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 48/112 (42%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +IE + R G  +HA  +   M   G + D   +   I +Y   G V+E+  +   M
Sbjct: 601 TYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARM 660

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
            + GV     +Y  L     R G    A     +ML  G +P+   +N ++W
Sbjct: 661 IEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLIW 712


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 249/483 (51%), Gaps = 10/483 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R+GK+  A  +L+ M  +    D   +  +I+ Y   G +++++K+ D M+  G
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +  +Y+++  L+ + G+   A++   +M+S+ I P    Y  ++ GFF    + TA 
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           ++F++M S+ IS D +TY T+I G+ +  K+ E + LF EM  + ++P  ++YTT+I  Y
Sbjct: 384 KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                  +A  + +EM    + PN VTY AL+ GLC  G++    ++L EM ++ +   +
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL-QLN 502

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             ++  ++   CK+G++  A  ++K M    I  +A  Y  +I+ +C+    D+A KLL 
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           +++++   L+P         ++N ++   C  G     +     +++KG++ D + +N L
Sbjct: 563 EMLDRG--LQPT------VVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           ++ H    + ++  +I K M  +GV  D++ Y  LI+ + +     +A      MIE G+
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P  + + ++++  ++  ++  A  + + M   G+  + ++    ++     G VE  L 
Sbjct: 675 VPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLN 734

Query: 541 RID 543
             D
Sbjct: 735 LCD 737



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 143/594 (24%), Positives = 268/594 (45%), Gaps = 42/594 (7%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           QF H L+Y   +   N      FF                    ++L  +G L+ AR +L
Sbjct: 174 QFTHRLIYTYKYWGPNPIAFDIFF--------------------QVLVEIGHLSEARKLL 213

Query: 80  LDMPKKGVQWDEDMFEVLIE--SYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
             +   G+    D     +   +   +GI + ++K+F    + G+  +  SY+ +   + 
Sbjct: 214 DKLLSYGLVVTVDSCNAFLSRIANNSEGI-EMAIKVF---CEYGISWNTTSYNIIIYSLC 269

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G+   A R   +M      P   +Y+ ++ G+    +L+ A++  +DM+ +G+  +  
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRY 329

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN++I    +  K  EAEK+  EM  + I P  + YTT+I G+  +     A + FDEM
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  + P+ +TYT L+ G    GK++E Q +  EM+ R + P D   +  L+ V CK+G 
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP-DEVTYTTLIDVYCKAGE 448

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  +   M+++ +      YG LI+  CK    D A +LLD++ +K         L 
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK--------GLQ 500

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
           +    YN M+  +C  G   +A    +++   G+  D + +  +I  + + G+ D A ++
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M  RG+      +  L+  +   G   D    L  M+E G  P +  + ++M+    
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---N 553
              + T +++ K M  +GV  + +    +++      +++EA      M++ G VP   +
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK---TLN 604
           +++L+    +K K + A +L +   G   + D   Y   +D     G    TLN
Sbjct: 681 YNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLN 734



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 204/424 (48%), Gaps = 10/424 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           +R T+  +I +L ++GK   A  +L +M  + +  D  ++  LI  + K G V+ + K F
Sbjct: 327 NRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWF 386

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M    +     +Y  L +   + G+ +  +  F++M+S G++P   TY  ++  +  +
Sbjct: 387 DEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA 446

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            ++  A     +M   G++ ++VTY  +I+G  +  ++D A +L  EM++K ++  V  Y
Sbjct: 447 GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            +M+ G       + A+++  EM+   + P+A+TYT ++   C  G + +  K+L+EM++
Sbjct: 507 NSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLD 566

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R + P   + F  L+   C  G L     +L  M+   I  +A  Y  L++  C     +
Sbjct: 567 RGLQPTVVT-FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
              K+  ++  + +   P S      ++YN +I+  C      +A   ++++++KG +  
Sbjct: 626 TTTKIYKRMRNQGV--APDS------NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677

Query: 415 V-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           V ++N LI+   K+     A E+ + M   G+  D + Y   ++    +G+        D
Sbjct: 678 VTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCD 737

Query: 474 SMIE 477
             IE
Sbjct: 738 EAIE 741



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 126/290 (43%), Gaps = 14/290 (4%)

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A KLLDKL+   +++    T+D    S N  +  + +N +    E+  +   + G+  + 
Sbjct: 209 ARKLLDKLLSYGLVV----TVD----SCNAFLSRIANNSE--GIEMAIKVFCEYGISWNT 258

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
            ++N +I    + G    A  ++  M  R    D  +Y  +I+ Y   GE   A   +D 
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M   G  P    + S++  L + G+   A +V++ M+ + +  +  +   ++      GH
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 535 VEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           V  A    D M+     P++    +L+    + GK I    L    + R    D  +Y  
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           ++D    AG+ +NA+S+  ++++ G   +  +   LI GL + G    A+
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 228/482 (47%), Gaps = 13/482 (2%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           GV  +     VLI    +   V  +V I   M +LG+  +  +++AL   +   G+   A
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEA 177

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
              FN+M+  G EP   +YN ++ G   +     A+  F+ M+  G   DVVTYNT+I+ 
Sbjct: 178 VELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS 237

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             + + +++A +  +EM ++ I P V +Y  M+ G+  + + ++A R+F EM   DV P+
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            VT T L+ GLC  G + E + V   M E+ + P + S +  L+   C    +N A  V 
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEP-NISTYNALMDGYCLQRLMNEAKKVF 356

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
           + MIR         Y ILI  FCK+   D A  LL ++  K         L+ +  +Y+ 
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHK--------ALNPDTVTYST 408

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++Q LC  G+  +A   F+++   G+L + V ++ L+ G  K G+ D A +++K M  + 
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK 468

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +  +   +  LIE     G+   AK     +  DG  P    +  +++ L ++G    A 
Sbjct: 469 LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAY 528

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ---SGSVPNFDSLLSVL 561
            + + M + G   N      +++  L       A+  ID M+    S ++  F  LL + 
Sbjct: 529 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLE 588

Query: 562 SE 563
           S+
Sbjct: 589 SQ 590



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 229/505 (45%), Gaps = 13/505 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F   + S+ KK      V + + M   GV  +V S + L   + R      A     KM 
Sbjct: 91  FGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMF 150

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             GI PT  T+N ++ G     K++ A+  F +M  RG   +V++YNT+ING  +     
Sbjct: 151 KLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTS 210

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A  +F +M++   +P V++Y T+I         +DA+    EM    + PN  TY  ++
Sbjct: 211 MAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMV 270

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  G++ E  ++ +EMV R + P D      L+   CK G ++ A  V + M    +
Sbjct: 271 HGFCILGQLNEATRLFKEMVGRDVMP-DTVTLTILVDGLCKEGMVSEARLVFETMTEKGV 329

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  L++ +C   + + A K+       EI++R      +   SYN +I   C +
Sbjct: 330 EPNISTYNALMDGYCLQRLMNEAKKVF------EIMIRQGCAPGVH--SYNILINGFCKS 381

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A+    ++  K +  D V ++ L++G  + G P  A  I K M   G+  +   Y
Sbjct: 382 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTY 441

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L++ + + G   +A   L SM E    P       ++E +F  G+++ A  +   +  
Sbjct: 442 SILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFA 501

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G++  +     +++ LL  G  +EA      M   G +PN   ++ ++    +   +  
Sbjct: 502 DGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSST 561

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLD 594
           A++L+D  +G+    +L++++ +LD
Sbjct: 562 AIRLIDEMVGKRFSANLSTFQMLLD 586



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 209/467 (44%), Gaps = 45/467 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R+  ++ A  IL  M K G+      F  LI     +G ++E+V++F+ M + G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKM----------------------------- 152
            E +V SY+ +   + + G   MA   F KM                             
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 153 ------LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                 L  GI P   TYN M+ GF +  +L  A R F++M  R +  D VT   +++G 
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +   + EA  +F  M EK +EP + +Y  ++ GY      ++A ++F+ M      P  
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            +Y  L+ G C + +M E + +L EM  + + P D   +  L+   C+ G    A ++ K
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNP-DTVTYSTLMQGLCQFGRPKEALNIFK 427

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M    +      Y IL++ FCK    D A+KLL  + EK+        L+     +  +
Sbjct: 428 EMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK--------LEPNIVHHTIL 479

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I+ +   G+   A+  F +L   G+   +  +  +I+G  KEG  D A+++ + M   G 
Sbjct: 480 IEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 539

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
             ++ +Y  +I+ +L+  + + A   +D M+    S   S F+ +++
Sbjct: 540 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 183/379 (48%), Gaps = 14/379 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L    N+  A+  F+ +E+ G    D  T+  +I+ L +   +N A   L +M
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGC-KPDVVTYNTIIDSLCKDRLVNDAMEFLSEM 254

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  +   +  ++  +   G + E+ ++F  M    V     +   L   + + G  
Sbjct: 255 LDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMV 314

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F  M  +G+EP   TYN ++ G+ L   +  A + FE M  +G +  V +YN +
Sbjct: 315 SEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNIL 374

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING+ + ++MDEA+ L AEM  K + P  ++Y+T+++G     R  +AL IF EM S+ +
Sbjct: 375 INGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGL 434

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQCKSGHLNA 320
            PN VTY+ LL G C  G + E  K+L+ M E+ + P    +++ ++ + +   +G L  
Sbjct: 435 LPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFI---AGKLEV 491

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A ++   +    I      Y ++I+   K  + D A  L  K+ +   +  P S      
Sbjct: 492 AKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL--PNS------ 543

Query: 381 SSYNPMIQHLCHNGQTGKA 399
            SYN MIQ    N  +  A
Sbjct: 544 CSYNVMIQGFLQNQDSSTA 562



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/496 (22%), Positives = 217/496 (43%), Gaps = 13/496 (2%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F +M+     P+   +   L  F    +  T +     M   G++ +V + N +IN   R
Sbjct: 76  FYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCR 135

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
              +D A  +  +M +  I PT  ++  +I G     +  +A+ +F+EM     +PN ++
Sbjct: 136 LNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVIS 195

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  ++ GLC  G       V ++M +    P D   +  ++   CK   +N A + L  M
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGCKP-DVVTYNTIIDSLCKDRLVNDAMEFLSEM 254

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +   IP     Y  ++  FC     + A +L  ++V ++++  P +       +   ++ 
Sbjct: 255 LDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVM--PDTV------TLTILVD 306

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G   +A + F  + +KGV   ++ +N L+ G+  +   + A ++ +IM R+G   
Sbjct: 307 GLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAP 366

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
              +Y  LI  + +     +AK+ L  M     +P +  + ++M+ L + GR + A  + 
Sbjct: 367 GVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIF 426

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEK 564
           K M   G+  NL   + +L+     GH++EAL  +  M +    PN      L+  +   
Sbjct: 427 KEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIA 486

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           GK   A +L            + +Y  ++  LL  G +  AY +  K+ + G + +  S 
Sbjct: 487 GKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSY 546

Query: 625 DKLIAGLNQEGNTKQA 640
           + +I G  Q  ++  A
Sbjct: 547 NVMIQGFLQNQDSSTA 562



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/478 (23%), Positives = 210/478 (43%), Gaps = 14/478 (2%)

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           ++ ++ A+  F  M        V  +   +  + + K+      L  +M    +   V S
Sbjct: 66  NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
              +I     +   D A+ I  +M    + P A T+ AL+ GLC+ GK+ E  ++  EMV
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
            R   P   S +  ++   CK+G+ + A DV K M +     +   Y  +I++ CK  + 
Sbjct: 186 RRGHEPNVIS-YNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLV 244

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           + A++ L +++++ I   P +       +YN M+   C  GQ  +A   F++++ + V+ 
Sbjct: 245 NDAMEFLSEMLDRGI---PPNVF-----TYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D V    L+ G  KEG    A  + + M  +GV  +   Y  L++ Y  +    +AK   
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           + MI  G +P    +  ++    +  R+  A  ++  M  K +  +    + +++ L   
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G  +EAL     M   G +PN   +  LL    + G    A+KLL     +    ++  +
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHH 476

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
             +++ +  AGK   A  +  K+   G     ++   +I GL +EG + +A D+  +M
Sbjct: 477 TILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKM 534



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 91/187 (48%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
            N D  T+  +++ L + G+   A  I  +M   G+  +   + +L++ + K G + E++
Sbjct: 399 LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEAL 458

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K+   M++  +E ++  +  L + +   G+  +AK  F+K+ ++GI PT  TY VM+ G 
Sbjct: 459 KLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGL 518

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
                 + A   F  M+  G   +  +YN MI G+ + +    A +L  EM  K     +
Sbjct: 519 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANL 578

Query: 232 ISYTTMI 238
            ++  ++
Sbjct: 579 STFQMLL 585


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 159/683 (23%), Positives = 305/683 (44%), Gaps = 59/683 (8%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
             P+   NL+   L    N E  L+F  W      F          + IL R      A+
Sbjct: 46  FTPEAASNLL---LKSQNNQELILKFLTWANPHQFFT--LRCKCITLHILTRFKLYKTAQ 100

Query: 77  CILLDMPKKGVQWDED--------------------MFEVLIESYGKKGIVQESVKIFDI 116
            +  D+  K +  DED                    +F+++++SY +  ++ +++ I  +
Sbjct: 101 TLAEDVAAKTLD-DEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHL 159

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYM-MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
            +  G    V SY+A+    +R  R +  A+  F +ML   + P   TYN+++ GF L+ 
Sbjct: 160 SQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAG 219

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
            L+ A+RFF+ M+ +G   +VVTYNT+I+GY + +K+D+  +L   M  K +EP +ISY 
Sbjct: 220 NLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYN 279

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I G     R  +   +  EM       + VTY  L+ G C  G   +   +  EM+  
Sbjct: 280 VVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYD 354
            + P   + +  L+   CK+G++N A + L  M +R   P E   Y  L++ F +    +
Sbjct: 340 GLSPSVIT-YTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT-YTTLVDGFSQKGYMN 397

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A ++L ++++        +       +YN +I   C  G+   A      + +KG+  D
Sbjct: 398 EAYRVLKEMID--------NGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPD 449

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V+++ ++ G  +  + D A  + + M  +G+  D   Y  LI+ +  +    +A    D
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFD 509

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+  G  P    + +++ +   +G +Q A ++   MVEKGV  ++   + ++  L  + 
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQA 569

Query: 534 HVEEALGRIDLMMQSGSVPN---------------FDSLLSVL---SEKGKTIAAVKLLD 575
              EA   +  +    SVP+               F S++S++     KG    A ++ +
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             L ++   D  +Y  ++      G    AYS+  ++++ G +    +   L+  L++EG
Sbjct: 630 SMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEG 689

Query: 636 NTKQAD-ILSRMIRG-EMSRGSQ 656
              + + +++ ++R  E+S   Q
Sbjct: 690 KVNELNSVIANVLRSCELSEAEQ 712



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 250/559 (44%), Gaps = 45/559 (8%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGL---------- 51
           AE  +   LQ+++   V  F +N++      A N + AL+FF  +E+ G           
Sbjct: 189 AENVFKEMLQSQVSPNV--FTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTL 246

Query: 52  -------------FNHDRETHLKMIEI-----------LGRVGKLNHARCILLDMPKKGV 87
                        F   R   LK +E            L R G++     +L +M K+G 
Sbjct: 247 IDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGY 306

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
             DE  +  LI+ Y K+G   +++ +   M + G+  SV +Y +L   + + G    A  
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATE 366

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           + ++M   G+ P   TY  ++ GF     +  A R  ++M   G S  VVTYN +ING+ 
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC 426

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
              KM +A  +  +MKEK + P V+SY+T++ G+      D+ALR+  +M +  +KP+ +
Sbjct: 427 IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           TY++L+ G C+  +  E   +  EM+   +PP D   +  L+   C  G L  A  +   
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPP-DEFTYTALINAYCMEGDLQKAIQLHNE 545

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP-------QSTLDMEA 380
           M+   +  +   Y +LI    K      A +LL KL  +E +          ++  ++E 
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            S   +I+  C  G   +A+  F  +++K    D  A+N +I GH + G+   A+ + K 
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKE 665

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M + G        I L+++  ++G+  +  + + +++       +   + ++E    +G 
Sbjct: 666 MVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGN 725

Query: 500 VQTASRVMKSMVEKGVKEN 518
           +     V+  M + G   N
Sbjct: 726 MDVVLDVLAEMAKDGFLPN 744



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 139/562 (24%), Positives = 240/562 (42%), Gaps = 76/562 (13%)

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           ++ A  +  +M +  V  +   + +LI  +   G +  +++ FD M++ G   +V +Y+ 
Sbjct: 186 ISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNT 245

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L     +  +          M  +G+EP   +YNV++ G     +++       +M  RG
Sbjct: 246 LIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRG 305

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI------------- 238
            SLD VTYNT+I GY +     +A  + AEM    + P+VI+YT++I             
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRAT 365

Query: 239 --------KGYVAVERA--------------DDALRIFDEMKSFDVKPNAVTYTALLPGL 276
                   +G    ER               ++A R+  EM      P+ VTY AL+ G 
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGH 425

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C AGKMV+   VL +M E+ + P D   +  +L   C+S  ++ A  V + M+   I  +
Sbjct: 426 CIAGKMVDAIAVLEDMKEKGLTP-DVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPD 484

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI+ FC+      A  L D+++   + L P      +  +Y  +I   C  G  
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLFDEML--RVGLPP------DEFTYTALINAYCMEGDL 536

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE-IVKIMGRRGVPRDADAY-- 452
            KA     ++++KGVL D V ++ LI G +K+     A   ++K+     VP D   +  
Sbjct: 537 QKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL 596

Query: 453 ------------ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
                       + LI+ +  KG   +A    +SM+E  H P  + +  ++      G +
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDI 656

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP-------- 552
           + A  + K MV+ G   +   V  +++ L   G V E    I  +++S  +         
Sbjct: 657 RKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVL 716

Query: 553 --------NFDSLLSVLSEKGK 566
                   N D +L VL+E  K
Sbjct: 717 VEINHREGNMDVVLDVLAEMAK 738


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 162/665 (24%), Positives = 289/665 (43%), Gaps = 50/665 (7%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           ++ L+P    +L+ ++ +   +   AL FFRW+ R   F H   TH  ++ +L R   L 
Sbjct: 44  LKTLIPSLTPSLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLR 103

Query: 74  HARCILLDMPKKGV-----------------------QWDEDMFEVLIESYGKKGIVQES 110
            A  +   M K                             +  F++ + SY +  +    
Sbjct: 104 AAENVRNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSR 163

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLIL----------RRGRYMMAKRYFNKMLSEGIEPT 160
             + D M  L  E    + +++F  ++          + G   +A+ +F ++L     P 
Sbjct: 164 FSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPD 223

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
             TY  ++ G+  +  +E A   F  M  R    + V+Y  +I+G     K+ EA + +A
Sbjct: 224 LFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWA 279

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
            M+E    PTV +YT ++       R  +AL +F EM+    +PN  TYT L+  LC  G
Sbjct: 280 RMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEG 339

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           +M E  K+L EMVE+ + P     F  L+G  CK G +  A  VL  M    +      Y
Sbjct: 340 RMDEALKMLNEMVEKGVAPSVVP-FNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTY 398

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             LI  FC+ +  DRA+ LL+K+VE        S L  +  +YN +I  LC  G    A 
Sbjct: 399 NELICGFCRGKSMDRAMALLNKMVE--------SKLSPDVVTYNTLIHGLCEVGVVDSAS 450

Query: 401 IFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
             FR +++ G   D   FN  +    + G    A +I++ +  + V  +  AY  LI+ Y
Sbjct: 451 RLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            + G+   A +    M+ +   P S  F  +++ L ++G+VQ A  +++ M +  VK  L
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTL 570

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                ++E +L     + A   ++ ++ SG  PN   + + +     +G+   A +++  
Sbjct: 571 HTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIK 630

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
                 ++D   Y  +++A    G   +A+ +L ++   G    + +   L+  L  E +
Sbjct: 631 IKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKH 690

Query: 637 TKQAD 641
            K+  
Sbjct: 691 KKEGS 695



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 160/658 (24%), Positives = 275/658 (41%), Gaps = 71/658 (10%)

Query: 46  VERA-GLF----NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
           VERA G+F      +  ++  +I  L   GKL+ A      M + G       + VL+ +
Sbjct: 240 VERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCA 299

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
             + G   E++ +F  M++ G E +V +Y  L   + + GR   A +  N+M+ +G+ P+
Sbjct: 300 LCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPS 359

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
              +N ++  +     +E A+     M+S+ +  +V TYN +I G+ R K MD A  L  
Sbjct: 360 VVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLN 419

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           +M E  + P V++Y T+I G   V   D A R+F  M      P+  T+ A +  LC  G
Sbjct: 420 KMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMG 479

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI----------- 329
           ++ E  ++L  + E+++   +++ +  L+   CK+G +  AA + K M+           
Sbjct: 480 RVGEAHQILESLKEKHVKANEHA-YTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITF 538

Query: 330 ------------------------RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
                                   +  +      Y IL+E   K   +DRA ++L++L+ 
Sbjct: 539 NVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI- 597

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
                   S       +Y   I+  C  G+  +AE    ++  +GV LD   +N LI  +
Sbjct: 598 -------SSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAY 650

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICL-----IESYLRKGE-PADAKTALDSMIED 478
              G  DSAF +++ M   G       Y  L     IE + ++G  P     +L ++  D
Sbjct: 651 GCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVD 710

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
                S +   +   LFE             M E G   NL+  +K++  L   G +  A
Sbjct: 711 NTDIWSKIDFGITTVLFE------------KMAECGCVPNLNTYSKLINGLCKVGRLNVA 758

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
                 M + G  P+    +SLLS   + G    AV LLD  +    +  L SY+ ++  
Sbjct: 759 FSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICG 818

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
           L        A ++   ++  G   D  +   LI GL + G   Q   L  ++     R
Sbjct: 819 LFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCR 876



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 134/574 (23%), Positives = 246/574 (42%), Gaps = 70/574 (12%)

Query: 44  RWVERAGLFNHDRE--------THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           R +E   LF   RE        T+  +I+ L + G+++ A  +L +M +KGV      F 
Sbjct: 305 RELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFN 364

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI SY K+G+++++V +  +M+   V  +V++Y+ L     R      A    NKM+  
Sbjct: 365 ALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVES 424

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            + P   TYN ++ G      +++A R F  M   G S D  T+N  +    R  ++ EA
Sbjct: 425 KLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEA 484

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            ++   +KEK+++    +YT +I GY    + + A  +F  M + +  PN++T+  ++ G
Sbjct: 485 HQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDG 544

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           L   GK+ +   ++ +M +  + P  ++ +  L+    K    + A ++L  +I      
Sbjct: 545 LRKEGKVQDAMLLVEDMAKFDVKPTLHT-YNILVEEVLKEYDFDRANEILNRLISSGYQP 603

Query: 336 EAGHYGILIENFCKA----EMYDRAIK------LLDKLVEKEII---------------L 370
               Y   I+ +C      E  +  IK      LLD  +   +I               L
Sbjct: 604 NVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVL 663

Query: 371 RPQSTLDMEAS--SYNPMIQHLC---HNGQT--------------------------GKA 399
           R       E S  +Y+ +++HL    H  +                           G  
Sbjct: 664 RRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGIT 723

Query: 400 EIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
            + F ++ + G +  +  ++ LI G  K G  + AF +   M   G+      +  L+ S
Sbjct: 724 TVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSS 783

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             + G   +A T LDSM+E  H      ++ ++  LFE    + A  V  S++  G   N
Sbjct: 784 CCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGY--N 841

Query: 519 LDLVA--KILEALLMRGHVEEALGRIDLMMQSGS 550
            D VA   +++ L   G+V++    ++LM ++G 
Sbjct: 842 YDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGC 875



 Score = 42.4 bits (98), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 65/151 (43%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+ K+I  L +VG+LN A  +   M + G+   E +   L+ S  K G+  E+V + D M
Sbjct: 741 TYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSM 800

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            +      ++SY  L   +  +     A+  F  +L  G       + V++ G   +  +
Sbjct: 801 MECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYV 860

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           +        M+  G  L   TY+ ++   NR
Sbjct: 861 DQCSELLNLMEKNGCRLHPETYSMLMQELNR 891


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 153/622 (24%), Positives = 286/622 (45%), Gaps = 20/622 (3%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           VY VL    +   A  FF  V       H  ET   ++E+L    ++     +   M K+
Sbjct: 92  VYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQ 151

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
            ++   + +  + +    +G ++E+    + M+++G   +  SY  L  L+L+ G    A
Sbjct: 152 IIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREA 211

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            + + +M+SEGI+P+  TY+ ++        +ET +   ++M+S G+  ++ T+   I  
Sbjct: 212 LKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRI 271

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             R  K+DEA  +   M +    P V++YT +I       + ++A  +F +MK+   KP+
Sbjct: 272 LGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPD 331

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
            VTY  LL    D G +  +++   EM  + Y+P  D   F  L+   CK G ++ A   
Sbjct: 332 RVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLP--DVVTFTILIDALCKVGKVDEAFGT 389

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L  M +  +      Y  LI    +    D A++L + +           +L +E ++Y 
Sbjct: 390 LDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSM----------ESLGLETTAYT 439

Query: 385 PM--IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
            +  I +   +G++GKA   F ++   G++ + VA N  +   +++G  + A E    + 
Sbjct: 440 YILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLK 499

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           + G+  DA  Y  L+  Y + G   DA   L  M E+G  P   +  S++++L++  RV 
Sbjct: 500 KCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVD 559

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A ++ + M E  +   +     +L  L   G V+EA      M+     PN   F++LL
Sbjct: 560 EAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLL 619

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
             L + G+   A+K+L      +C  D+ +Y  V+  L+   +   A+  LF  M+K   
Sbjct: 620 DCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFW-LFHQMKKVIY 678

Query: 619 TDWKSSDKLIAGLNQEGNTKQA 640
            D+ +   L+ G+ ++G  + A
Sbjct: 679 PDYVTLCTLLPGVIKDGRIEDA 700



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 144/592 (24%), Positives = 259/592 (43%), Gaps = 16/592 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           DR T++ +++     G L+  +    +M   G   D   F +LI++  K G V E+    
Sbjct: 331 DRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTL 390

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D+MK+ GV  ++ +Y+ L   +LR  R   A   FN M S G+E T +TY + +  +  S
Sbjct: 391 DVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKS 450

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +   AI+ FE MK+ GI  ++V  N  +       +++EA++ F  +K+  + P  I+Y
Sbjct: 451 GESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITY 510

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +++ Y    R DDA+++  EM+     P  V   +L+  L  A ++ E  K+ + M E
Sbjct: 511 NILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKE 570

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P   +    L G+  K G +  A  + K MI    P     +  L++  CK    D
Sbjct: 571 MKLAPTVVTYNTLLAGLG-KEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVD 629

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A+K+L ++ E             +  +YN +I  L    +   A   F Q+ K    D 
Sbjct: 630 LALKMLFRMTEMNCF--------PDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDY 681

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVK-IMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           V    L+ G  K+G  + AF + K  +   G   D   +  L+   L + E   +    +
Sbjct: 682 VTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAE 741

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK-GVKENLDLVAKILEALLMR 532
           S++ +      S+   +++ L + G+   A  V   + +   +  +L+    +++ LL  
Sbjct: 742 SLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKA 801

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
              E A G    M  +G  P+   ++  L  L + GK      L +  L R C  +  ++
Sbjct: 802 RLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITH 861

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKG-GVTDWKSSDKLIAGLNQEGNTKQA 640
             V+  L+ +     A  + + +M      T W +   LI GL + G  ++A
Sbjct: 862 NIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPW-TYGPLIDGLLKLGRLEEA 912



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 144/615 (23%), Positives = 268/615 (43%), Gaps = 49/615 (7%)

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            L   G+L  A+     + K G+  D   + +L+  YGK G V +++K+   M++ G +  
Sbjct: 482  LAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPE 541

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
            V   ++L   + +  R   A + F +M    + PT  TYN +L G     +++ A   F+
Sbjct: 542  VVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFK 601

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
             M +     + +++NT+++   +  ++D A K+   M E N  P V++Y T+I G +   
Sbjct: 602  GMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKEN 661

Query: 246  RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY--------- 296
            R + A  +F +MK   + P+ VT   LLPG+   G++ +  +V +E V            
Sbjct: 662  RVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFW 720

Query: 297  --------------------------IPPKDNSVFMKLLGVQCKSGHLNAAADV-LKAMI 329
                                         +D+SV + L+   CK G    A +V LK   
Sbjct: 721  EDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTK 780

Query: 330  RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
               I      Y  LI+   KA + + A  L  K+  K     P      +  +YN  +  
Sbjct: 781  SFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKM--KNAGCTP------DVFTYNLFLDA 832

Query: 390  LCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
            L  +G+  +    + +++ +G   + +  N +I G  K  + D A ++   +        
Sbjct: 833  LGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPT 892

Query: 449  ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
               Y  LI+  L+ G   +AK   + M++ G  P   L+  +M    + G V+TA  + +
Sbjct: 893  PWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFR 952

Query: 509  SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
             MV++G++ +L   + +++ L M G V++AL   + +  SG  P+   ++ +++ L    
Sbjct: 953  RMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQ 1012

Query: 566  KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
            +   A+ L D    R    DL +Y  ++  L  AG    A  +  ++  KG   +  + +
Sbjct: 1013 RVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYN 1072

Query: 626  KLIAGLNQEGNTKQA 640
             LI G +  GN  +A
Sbjct: 1073 ALIRGHSMSGNPDRA 1087



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 153/643 (23%), Positives = 269/643 (41%), Gaps = 54/643 (8%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+ +R +   G+     +T+  ++  LG+   +     +L +M   G++ +   F + I
Sbjct: 211 ALKVYRRMVSEGI-KPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICI 269

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
              G+ G + E+  I   M   G    V +Y  L   +   G+   AK  F KM +   +
Sbjct: 270 RILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHK 329

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P R TY  +L  F     L+    F+ +M++ G   DVVT+  +I+   +  K+DEA   
Sbjct: 330 PDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGT 389

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              MK++ + P + +Y T+I G + + R D+AL +F+ M+S  ++  A TY   +     
Sbjct: 390 LDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGK 449

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           +G+  +  K   +M    I P   +    L  +  + G L  A +    + +  +  +A 
Sbjct: 450 SGESGKAIKTFEKMKTNGIVPNIVACNASLYSLA-EQGRLEEAKEFFNGLKKCGLAPDAI 508

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y IL+  + KA   D AIKLL ++ E        +  D E    N +I  L    +  +
Sbjct: 509 TYNILMRCYGKAGRVDDAIKLLSEMEE--------NGCDPEVVIINSLIDTLYKADRVDE 560

Query: 399 AEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           A   F Q MK+  L P  V +N L+ G  KEG    A  + K M     P +  ++  L+
Sbjct: 561 AWKMF-QRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLL 619

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           +   + GE   A   L  M E    P    + +V+  L ++ RV  A  +   M +K + 
Sbjct: 620 DCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIY 678

Query: 517 ENLDLVAKILEALLMRGHVEEA--------------------------------LGRIDL 544
            +   +  +L  ++  G +E+A                                +G+  L
Sbjct: 679 PDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSIL 738

Query: 545 MMQS---GSVPNFDS----LLSVLSEKGKTIAAVKLLDFCLGRDCII-DLASYEKVLDAL 596
             +S    ++   DS    L+  L + GK + A  +        CI   L +Y  ++D L
Sbjct: 739 FAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGL 798

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
           L A  T  A+ + +K+   G   D  + +  +  L + G  K+
Sbjct: 799 LKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKE 841



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 169/354 (47%), Gaps = 13/354 (3%)

Query: 90   DEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            D+ +   L++   K G   ++  +F  + K   +  S+++Y++L   +L+     MA   
Sbjct: 751  DDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGL 810

Query: 149  FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
            F KM + G  P   TYN+ L     S K++     +E+M  RG   + +T+N +I G  +
Sbjct: 811  FYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVK 870

Query: 209  FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
               +D+A  L+ ++   +  PT  +Y  +I G + + R ++A + F+EM  +   PN   
Sbjct: 871  SNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930

Query: 269  YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
            Y  L+ G    G +    ++ R MV+  I P D   +  ++   C  G ++ A    + +
Sbjct: 931  YNILMNGFGKQGDVETACELFRRMVKEGIRP-DLKSYSIMVDCLCMVGKVDDALHYFEEL 989

Query: 329  IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
                +  +   Y ++I    +++  + A+ L D++  + I      T D+   +YN +I 
Sbjct: 990  KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGI------TPDL--YTYNALIL 1041

Query: 389  HLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NNLIRGHSKEGNPDSAFEIVKIM 440
            +L   G   +A   + +L  KG L+P  F  N LIRGHS  GNPD A+ + K M
Sbjct: 1042 NLGIAGMVEEAGKMYEELQLKG-LEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 133/250 (53%), Gaps = 1/250 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            HN+V   L  + + + A+  + +   +G F+    T+  +I+ L ++G+L  A+    +M
Sbjct: 861  HNIVIFGLVKSNSLDKAIDLY-YDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEM 919

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G   +  ++ +L+  +GK+G V+ + ++F  M + G+   +KSY  +   +   G+ 
Sbjct: 920  LDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKV 979

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A  YF ++   G++P    YN+M+ G   S ++E A+  F++M++RGI+ D+ TYN +
Sbjct: 980  DDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNAL 1039

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I        ++EA K++ E++ K +EP V +Y  +I+G+      D A  ++ +M     
Sbjct: 1040 ILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGC 1099

Query: 263  KPNAVTYTAL 272
            +PN  T+  L
Sbjct: 1100 RPNTGTFAQL 1109



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 153/315 (48%), Gaps = 3/315 (0%)

Query: 16   ALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
             + P  + +N + + L  A+ +E A   F  ++ AG    D  T+   ++ LG+ GK+  
Sbjct: 783  CITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGC-TPDVFTYNLFLDALGKSGKIKE 841

Query: 75   ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
               +  +M  +G + +     ++I    K   + +++ ++  +       +  +Y  L  
Sbjct: 842  LFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901

Query: 135  LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
             +L+ GR   AK++F +ML  G  P    YN+++ GF     +ETA   F  M   GI  
Sbjct: 902  GLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRP 961

Query: 195  DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            D+ +Y+ M++      K+D+A   F E+K   ++P ++ Y  MI G    +R ++AL +F
Sbjct: 962  DLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLF 1021

Query: 255  DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            DEM++  + P+  TY AL+  L  AG + E  K+  E+  + + P +   +  L+     
Sbjct: 1022 DEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEP-NVFTYNALIRGHSM 1080

Query: 315  SGHLNAAADVLKAMI 329
            SG+ + A  V K M+
Sbjct: 1081 SGNPDRAYAVYKKMM 1095



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 138/294 (46%), Gaps = 2/294 (0%)

Query: 1    MAERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
            + E AW    + K     P  F +NL  + L  +   +     +  +   G    +  TH
Sbjct: 803  LTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGC-KPNTITH 861

Query: 60   LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
              +I  L +   L+ A  +  D+           +  LI+   K G ++E+ + F+ M  
Sbjct: 862  NIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLD 921

Query: 120  LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
             G   +   Y+ L     ++G    A   F +M+ EGI P   +Y++M+    +  K++ 
Sbjct: 922  YGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDD 981

Query: 180  AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
            A+ +FE++K  G+  D+V YN MING  R ++++EA  LF EM+ + I P + +Y  +I 
Sbjct: 982  ALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALIL 1041

Query: 240  GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
                    ++A ++++E++   ++PN  TY AL+ G   +G       V ++M+
Sbjct: 1042 NLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMM 1095



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 116/569 (20%), Positives = 232/569 (40%), Gaps = 51/569 (8%)

Query: 24   NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            N + + L+ A   + A + F+ ++   L      T+  ++  LG+ G++  A  +   M 
Sbjct: 546  NSLIDTLYKADRVDEAWKMFQRMKEMKL-APTVVTYNTLLAGLGKEGRVQEATALFKGMI 604

Query: 84   KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
                  +   F  L++   K G V  ++K+   M ++     V +Y+ +   +++  R  
Sbjct: 605  ADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVN 664

Query: 144  MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR----------------FFEDM 187
             A   F++M  + I P   T   +L G     ++E A R                F+ED+
Sbjct: 665  YAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDL 723

Query: 188  KSRGISLDV-----------VTYNT----------MINGYNRFKKMDEAEKLFAEM-KEK 225
               GI ++            +  NT          ++    +  K  +A  +F ++ K  
Sbjct: 724  MG-GILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSF 782

Query: 226  NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
             I P++ +Y ++I G +     + A  +F +MK+    P+  TY   L  L  +GK+ E+
Sbjct: 783  CITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKEL 842

Query: 286  QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
              +  EM+ R   P   +  + + G+  KS  L+ A D+   ++          YG LI+
Sbjct: 843  FDLYEEMLFRGCKPNTITHNIVIFGL-VKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901

Query: 346  NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
               K    + A +  +++++   +  P   L      YN ++      G    A   FR+
Sbjct: 902  GLLKLGRLEEAKQFFEEMLDYGCM--PNCPL------YNILMNGFGKQGDVETACELFRR 953

Query: 406  LMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
            ++K+G+  D  +++ ++      G  D A    + +   G+  D   Y  +I    R   
Sbjct: 954  MVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQR 1013

Query: 465  PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              +A +  D M   G +P    + +++ +L   G V+ A ++ + +  KG++ N+     
Sbjct: 1014 VEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNA 1073

Query: 525  ILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            ++    M G+ + A      MM  G  PN
Sbjct: 1074 LIRGHSMSGNPDRAYAVYKKMMVGGCRPN 1102



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 89/182 (48%), Gaps = 1/182 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N++ N      + E A + FR + + G+   D +++  M++ L  VGK++ A     ++
Sbjct: 931  YNILMNGFGKQGDVETACELFRRMVKEGI-RPDLKSYSIMVDCLCMVGKVDDALHYFEEL 989

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G+  D   + ++I   G+   V+E++ +FD M+  G+   + +Y+AL   +   G  
Sbjct: 990  KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMV 1049

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A + + ++  +G+EP   TYN ++ G  +S   + A   ++ M   G   +  T+  +
Sbjct: 1050 EEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109

Query: 203  IN 204
             N
Sbjct: 1110 PN 1111


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 217/443 (48%), Gaps = 13/443 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + LV  +    K S+  +   R VE    F  +  T+  ++ ++ + G+   A  +L  M
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETG--FQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ ++ D   + ++I+   K G +  +  +F+ M+  G +  + +Y+ L       GR+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
               +    M+   I P   T++V++  F    KL  A +  ++M  RGI+ + +TYN++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G+ +  +++EA ++   M  K  +P ++++  +I GY    R DD L +F EM    V
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             N VTY  L+ G C +GK+   +K+ +EMV R + P D   +  LL   C +G L  A 
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP-DIVSYKILLDGLCDNGELEKAL 493

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++   + +  +  + G Y I+I   C A   D A  L   L        P   + ++A +
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL--------PLKGVKLDARA 545

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN MI  LC      KA+I FR++ ++G   D + +N LIR H  + +  +A E+++ M 
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605

Query: 442 RRGVPRDADAYICLIESYLRKGE 464
             G P D  + + ++ + L  GE
Sbjct: 606 SSGFPADV-STVKMVINMLSSGE 627



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 238/549 (43%), Gaps = 42/549 (7%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D N +++ +   K  E  L   + +E  G+  H   T   MI    R  KL++
Sbjct: 83  RPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI-AHSIYTLSIMINCFCRCRKLSY 141

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A   +  + K G + D  +F  L+     +  V E++++ D M ++G + ++ + + L  
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            +   G+   A    ++M+  G +P   TY  +L     S +   A+     M+ R I L
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D V Y+ +I+G  +   +D A  LF EM+ K  +  +I+Y T+I G+    R DD  ++ 
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            +M    + PN VT++ L+      GK+ E  ++L+EM++R I P +   +  L+   CK
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP-NTITYNSLIDGFCK 380

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII----- 369
              L  A  ++  MI      +   + ILI  +CKA   D  ++L  ++  + +I     
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440

Query: 370 ----------------------------LRPQSTLDMEASSYNPMIQHLCHNGQTGKA-E 400
                                       +RP      +  SY  ++  LC NG+  KA E
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP------DIVSYKILLDGLCDNGELEKALE 494

Query: 401 IFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
           IF +    K  LD   +  +I G       D A+++   +  +GV  DA AY  +I    
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           RK   + A      M E+GH+P    +  ++ +   D    TA+ +++ M   G   ++ 
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVS 614

Query: 521 LVAKILEAL 529
            V  ++  L
Sbjct: 615 TVKMVINML 623



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 130/551 (23%), Positives = 246/551 (44%), Gaps = 49/551 (8%)

Query: 100 SYGKKGI-VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           S G  GI   ++V +F  M Q     +V  ++ LF  I +  +Y +      +M S+GI 
Sbjct: 61  SSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIA 120

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
            + +T ++M+  F    KL  A      +   G   D V +NT++NG     ++ EA +L
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              M E   +PT+I+  T++ G     +  DA+ + D M     +PN VTY  +L  +C 
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           +G+     ++LR+M ER I   D   +  ++   CK G L+ A ++   M       +  
Sbjct: 241 SGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI  FC A  +D   KLL  +++++I   P         +++ +I      G+  +
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKI--SPN------VVTFSVLIDSFVKEGKLRE 351

Query: 399 AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A+   +++M++G+  + + +N+LI G  KE   + A ++V +M  +G   D   +  LI 
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
            Y +     D       M   G    +  + ++++   + G+++ A ++ + MV + V+ 
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471

Query: 518 NLDLVAKILEALLMRGHVEEAL---GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
           ++     +L+ L   G +E+AL   G+I                    EK K        
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKI--------------------EKSKM------- 504

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                    +D+  Y  ++  +  A K  +A+ +   +  KG   D ++ + +I+ L ++
Sbjct: 505 --------ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556

Query: 635 GNTKQADILSR 645
            +  +ADIL R
Sbjct: 557 DSLSKADILFR 567



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/455 (22%), Positives = 209/455 (45%), Gaps = 15/455 (3%)

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
           +Y   L    + +K + A+  F DM +SR +   V+ +N + +   + K+ +    L  +
Sbjct: 55  SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLP-TVIDFNRLFSAIAKTKQYELVLALCKQ 113

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M+ K I  ++ + + MI  +    +   A     ++     +P+ V +  LL GLC   +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           + E  +++  MVE    P   ++   + G+ C +G ++ A  ++  M+          YG
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGL-CLNGKVSDAVVLIDRMVETGFQPNEVTYG 232

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            ++   CK+     A++LL K+ E+ I         ++A  Y+ +I  LC +G    A  
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNI--------KLDAVKYSIIIDGLCKDGSLDNAFN 284

Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F ++  KG   D + +N LI G    G  D   ++++ M +R +  +   +  LI+S++
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           ++G+  +A   L  M++ G +P +  + S+++   ++ R++ A +++  M+ KG   ++ 
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
               ++        +++ L     M   G + N   +++L+    + GK   A KL    
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
           + R    D+ SY+ +LD L   G+   A  I  KI
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/457 (20%), Positives = 199/457 (43%), Gaps = 37/457 (8%)

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
            E+ F+   ++N+     SY   +   +   +ADDA+ +F +M      P  + +  L  
Sbjct: 42  CERGFSTFSDRNL-----SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFS 96

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
            +    +   V  + ++M  + I     ++ + ++   C+   L+ A   +  +++L   
Sbjct: 97  AIAKTKQYELVLALCKQMESKGIAHSIYTLSI-MINCFCRCRKLSYAFSTMGKIMKLGYE 155

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVE---KEIILRPQS-----TLDMEAS----- 381
            +   +  L+   C       A++L+D++VE   K  ++   +      L+ + S     
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215

Query: 382 --------------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
                         +Y P++  +C +GQT  A    R++ ++ + LD V ++ +I G  K
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           +G+ D+AF +   M  +G   D   Y  LI  +   G   D    L  MI+   SP    
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F  +++S  ++G+++ A +++K M+++G+  N      +++       +EEA+  +DLM+
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
             G  P+   F+ L++   +  +    ++L      R  I +  +Y  ++     +GK  
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            A  +  +++ +    D  S   L+ GL   G  ++A
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 158/659 (23%), Positives = 282/659 (42%), Gaps = 70/659 (10%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR--- 68
           ++++ L PQ   + V  ++   K++E  +QFF W+ +   + H+    + M+  L R   
Sbjct: 106 SELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRV 165

Query: 69  VGKLNHARCILL-----------------DMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
               +H R +++                 ++   G  +       L+    K  +V+ + 
Sbjct: 166 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 225

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            ++  M   G++ S+ +++ L  ++ ++G+   A+   +++    + P   TY  ++ G 
Sbjct: 226 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 285

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             +  L+ A   F+ M   G   + VTY+T+ING     ++DEA  +  EM EK IEPTV
Sbjct: 286 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 345

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +YT  I    A+E  ++A+ +   MK    +PN  TYTAL+ GL   GK          
Sbjct: 346 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK---------- 395

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
                                     L  A  +   M++  +      Y  LI   C   
Sbjct: 396 --------------------------LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 429

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
            +  A+K+   +     +   Q        +YN +I+ LC  G   KA + F +++K G 
Sbjct: 430 RFSTALKIFHWMEGHGSLANTQ--------TYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 481

Query: 412 LDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
           L   V +N LI G+  +GN ++A  ++ +M   G   D   Y  L+  + + G+   A  
Sbjct: 482 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 541

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
               M+E G +P    + ++++   +DG+V  A  +++ M E G   N++    ++  L 
Sbjct: 542 YFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS 601

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
                 EA    D M + G +PN   + +L+  L   G+T  A K+      R C+ +L 
Sbjct: 602 KENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGLNQEGNTKQADILSR 645
           +Y  ++  L   GK   A  IL K ME+ G+  D  +   LI G    G    A +L R
Sbjct: 662 TYSSLIYGLCQEGKADEA-EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR 719



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 151/606 (24%), Positives = 273/606 (45%), Gaps = 37/606 (6%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L   G+++ A  +L +M +KG++     + + I +       +E++++   M
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+ G   +V++Y AL   + R G+  +A   ++KML EG+ P   TYN ++    +  + 
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            TA++ F  M+  G   +  TYN +I G      +++A  LF +M +    PTV++Y T+
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 491

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY+     ++A R+ D MK    +P+  TY  L+ G    GK+       +EMVE  +
Sbjct: 492 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 551

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P   S +  L+    K G ++ A  +L+ M  +        Y  +I    K   +  A 
Sbjct: 552 NPNPVS-YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAE 610

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-A 416
           K+ DK+ E+ ++  P         +Y  +I  LC NG+T  A   F  + K+  L  +  
Sbjct: 611 KICDKMAEQGLL--PN------VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 662

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +++LI G  +EG  D A  ++K M R+G+  D   +  LI+ ++  G    A   L  M+
Sbjct: 663 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 722

Query: 477 EDGHSPASSLFRSVMESLFE------------------------DGRVQTASRVMKSMVE 512
           + G  P    +  +++ L +                        D   +  S ++  M E
Sbjct: 723 DVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSE 782

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA--- 569
            G +  LD  + ++  L  +G   EA   +  M + G  P+ +   S+L    K +    
Sbjct: 783 IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDH 842

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A+K+      +   + L+ Y  ++ AL  AG+   A ++   ++EK    D      L+ 
Sbjct: 843 ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 902

Query: 630 GLNQEG 635
           GL +EG
Sbjct: 903 GLLKEG 908



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 265/568 (46%), Gaps = 32/568 (5%)

Query: 16  ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
            LVP    +N + N L        AL+ F W+E  G    + +T+ ++I+ L   G +  
Sbjct: 410 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA-NTQTYNEIIKGLCLGGDIEK 468

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +   M K G       +  LI  Y  KG V  + ++ D+MK+ G E    +Y+ L  
Sbjct: 469 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 528

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
              + G+   A  YF +M+  G+ P   +Y  ++ G     K++ A+   E M+  G + 
Sbjct: 529 GFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNP 588

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           +V +YN +ING ++  +  EAEK+  +M E+ + P VI+YTT+I G     R   A +IF
Sbjct: 589 NVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 648

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            +M+     PN  TY++L+ GLC  GK  E + +L+EM  + + P D   F  L+     
Sbjct: 649 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP-DEVTFTSLIDGFVV 707

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G ++ A  +L+ M+ +        Y +L++   K  +          L+E+++ ++ ++
Sbjct: 708 LGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECL----------LLEEKVAVQHEA 757

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL--MKKGVLDPV--AFNNLIRGHSKEGNP 430
                  S++P       + +    EI    L  M +   +P    ++ L+ G  ++G  
Sbjct: 758 VY-----SFSP-------HEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRF 805

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
             A ++VK M  RG   D + Y  L+ ++ +  E   A     S+   G     S++R++
Sbjct: 806 YEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRAL 865

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           + +L + G+V+ A  +  +M+EK    +  +   +++ LL  G ++  +  + +M     
Sbjct: 866 ICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 925

Query: 551 VPNFDSLLSV---LSEKGKTIAAVKLLD 575
            PN  + + +   LS  GK+I +  L D
Sbjct: 926 TPNIQTYVILGRELSRIGKSIESEPLAD 953



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 227/516 (43%), Gaps = 34/516 (6%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           +T+  +I  L R+GKL  A  +   M K+G+  +   +  LI      G    ++KIF  
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 440

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M+  G   + ++Y+ + K +   G    A   F KML  G  PT  TYN ++ G+     
Sbjct: 441 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 500

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +  A R  + MK  G   D  TYN +++G++++ K++ A   F EM E  + P  +SYTT
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G+    + D AL + + M+     PN  +Y A++ GL    +  E +K+  +M E+ 
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P +   +  L+   C++G    A  +   M +         Y  LI   C+    D A
Sbjct: 621 LLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 679

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
             LL ++  K         L  +  ++  +I      G+   A +  R+++  G   +  
Sbjct: 680 EILLKEMERK--------GLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYR 731

Query: 416 AFNNLIRGHSKEG-----------------NP---DSAFEIVKIMGRR----GVPRDADA 451
            ++ L++G  KE                  +P   D  FEIV  +  R    G     D 
Sbjct: 732 TYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDT 791

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  L+    RKG   +A+  +  M E G  P   ++ S++ +  ++  V  A ++  S+ 
Sbjct: 792 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE 851

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            KG + +L +   ++ AL   G VEEA    D M++
Sbjct: 852 AKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE 887


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 236/497 (47%), Gaps = 17/497 (3%)

Query: 25  LVYNVLHGAKNSE----HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
             YN++ G    E     A   F  +++ GL   D  T+  +I+  G++G L+ + C+  
Sbjct: 133 FTYNIMIGHVCKEGDMLTARSLFEQMKKMGL-TPDIVTYNTLIDGYGKIGLLDESVCLFE 191

Query: 81  DMPKKGVQWDEDMFEVLIESYGK-KGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
           +M   G + D   +  LI S+ K KG+++ + + F  MK   ++ +V SY  L   + + 
Sbjct: 192 EMKFMGCEPDVITYNALINSFCKFKGMLR-AFEFFREMKDKDLKPNVISYSTLIDALCKE 250

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G   MA ++F  M   G+ P   TY+ ++     +  L  A    ++M    + L++VTY
Sbjct: 251 GMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTY 310

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            T+++G      M+EAE+LF  M +  + P + +YT +I G++ V   D A+ +F+EM+ 
Sbjct: 311 TTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMRE 370

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
            D+KP+ + +  ++ GLC   K+ E + ++ EM E  I   +  ++  L+    K+G+  
Sbjct: 371 KDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGA-NPVIYTTLMDAYFKAGNRT 429

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A ++L+ M  L        +  LI+  CK  +   AI    ++        P   L   
Sbjct: 430 EAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRM--------PDHDLQPN 481

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
            + Y  +I  LC N   G A+  F ++  K ++ D +A+  +I G+ K GN   A  +  
Sbjct: 482 VAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRN 541

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G+  D  AY  L+    + G+   A+  L  MI  G  P  +L   ++   +E G
Sbjct: 542 KMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELG 601

Query: 499 RVQTASRVMKSMVEKGV 515
            +  A  +   +VEKG+
Sbjct: 602 NIDEAIELQNELVEKGL 618



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 155/606 (25%), Positives = 268/606 (44%), Gaps = 34/606 (5%)

Query: 48  RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP-KKGVQWDEDMFEVLIESYGKKGI 106
           R G F H  E++  ++ IL       HA  IL ++     V    D+FE+L   +  + +
Sbjct: 2   RVG-FRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEIL---WTTRNV 57

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
                 +FD               ALF +++  G    A + F +M    + P   + N 
Sbjct: 58  CVPGFGVFD---------------ALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNA 102

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
            L     + + + +  FF DM   GI+  V TYN MI    +   M  A  LF +MK+  
Sbjct: 103 FLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMG 162

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           + P +++Y T+I GY  +   D+++ +F+EMK    +P+ +TY AL+   C    M+   
Sbjct: 163 LTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAF 222

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           +  REM ++ + P   S +  L+   CK G +  A      M R+ +      Y  LI+ 
Sbjct: 223 EFFREMKDKDLKPNVIS-YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDA 281

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CKA     A  L D+++++ +        D+   +Y  ++  LC  G   +AE  FR +
Sbjct: 282 NCKAGNLGEAFMLADEMLQEHV--------DLNIVTYTTLLDGLCEEGMMNEAEELFRAM 333

Query: 407 MKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            K GV   + A+  LI GH K  + D A E+   M  + +  D   +  ++     + + 
Sbjct: 334 GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKL 393

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            + K  +  M E G      ++ ++M++ F+ G    A  +++ M + G +  +     +
Sbjct: 394 EECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCAL 453

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           ++ L  RG V+EA+     M      PN   + +L+  L +      A KL D    ++ 
Sbjct: 454 IDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNM 513

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-D 641
           I D  +Y  ++D  L  G    A ++  K+ME G   D  +   L+ GL+Q G  +QA  
Sbjct: 514 IPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARK 573

Query: 642 ILSRMI 647
            L+ MI
Sbjct: 574 FLAEMI 579


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 248/483 (51%), Gaps = 10/483 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R+GK+  A  +L+ M  +    D   +  +I+ Y   G +++++K+ D M+  G
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +  +Y+++  L+ + G+   A++   +M+S+ I P    Y  ++ GFF    + TA 
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           ++F++M S+ IS D +TY T+I G+ +  K+ E + LF EM  + ++P  ++YTT+I  Y
Sbjct: 384 KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                  +A  + +EM    + PN VTY AL+ GLC  G++    ++L EM ++ +   +
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL-QLN 502

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             ++  ++   CK+G++  A  ++K M    I  +A  Y  +I+ +C+    D+A KLL 
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           +++++   L+P         ++N ++   C  G     +     +++KG++ D + +N L
Sbjct: 563 EMLDRG--LQPT------VVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           ++ H    + ++  +I K M  +GV  D++ Y  LI+ + +     +A      MIE G+
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P  + + ++++  ++  +   A  + + M   G+  + ++    ++     G VE  L 
Sbjct: 675 VPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLN 734

Query: 541 RID 543
             D
Sbjct: 735 LCD 737



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/594 (24%), Positives = 267/594 (44%), Gaps = 42/594 (7%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           QF H L+Y   +   N      FF                    ++L  +G L+ AR +L
Sbjct: 174 QFTHRLIYTYKYWGPNPIAFDIFF--------------------QVLVEIGHLSEARKLL 213

Query: 80  LDMPKKGVQWDEDMFEVLIE--SYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
             +   G+    D     +   +   +GI + ++K+F    + G+  +  SY+ +   + 
Sbjct: 214 DKLLSYGLVVTVDSCNAFLSRIANNSEGI-EMAIKVF---CEYGISWNTTSYNIIIYSLC 269

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G+   A R   +M      P   +Y+ ++ G+    +L+ A++  +DM+ +G+  +  
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRY 329

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN++I    +  K  EAEK+  EM  + I P  + YTT+I G+  +     A + FDEM
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  + P+ +TYT L+ G    GK++E Q +  EM+ R + P D   +  L+ V CK+G 
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP-DEVTYTTLIDVYCKAGE 448

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  +   M+++ +      YG LI+  CK    D A +LLD++ +K         L 
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK--------GLQ 500

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
           +    YN M+  +C  G   +A    +++   G+  D + +  +I  + + G+ D A ++
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M  RG+      +  L+  +   G   D    L  M+E G  P +  + ++M+    
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---N 553
              + T +++ K M  +GV  + +    +++      +++EA      M++ G VP   +
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK---TLN 604
           +++L+    +K K   A +L +   G   + D   Y   +D     G    TLN
Sbjct: 681 YNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLN 734



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 204/424 (48%), Gaps = 10/424 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           +R T+  +I +L ++GK   A  +L +M  + +  D  ++  LI  + K G V+ + K F
Sbjct: 327 NRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWF 386

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M    +     +Y  L +   + G+ +  +  F++M+S G++P   TY  ++  +  +
Sbjct: 387 DEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA 446

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            ++  A     +M   G++ ++VTY  +I+G  +  ++D A +L  EM++K ++  V  Y
Sbjct: 447 GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            +M+ G       + A+++  EM+   + P+A+TYT ++   C  G + +  K+L+EM++
Sbjct: 507 NSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLD 566

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R + P   + F  L+   C  G L     +L  M+   I  +A  Y  L++  C     +
Sbjct: 567 RGLQPTVVT-FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
              K+  ++  + +   P S      ++YN +I+  C      +A   ++++++KG +  
Sbjct: 626 TTTKIYKRMRNQGV--APDS------NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677

Query: 415 V-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           V ++N LI+   K+     A E+ + M   G+  D + Y   ++    +G+        D
Sbjct: 678 VTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCD 737

Query: 474 SMIE 477
             IE
Sbjct: 738 EAIE 741



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 126/290 (43%), Gaps = 14/290 (4%)

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A KLLDKL+   +++    T+D    S N  +  + +N +    E+  +   + G+  + 
Sbjct: 209 ARKLLDKLLSYGLVV----TVD----SCNAFLSRIANNSE--GIEMAIKVFCEYGISWNT 258

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
            ++N +I    + G    A  ++  M  R    D  +Y  +I+ Y   GE   A   +D 
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M   G  P    + S++  L + G+   A +V++ M+ + +  +  +   ++      GH
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 535 VEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           V  A    D M+     P++    +L+    + GK I    L    + R    D  +Y  
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           ++D    AG+ +NA+S+  ++++ G   +  +   LI GL + G    A+
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 235/492 (47%), Gaps = 13/492 (2%)

Query: 87  VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
           + +D   + +LI  + ++  +  ++ +   M +LG E  + +  +L        R   A 
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 170

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
              ++M+  G +P   T+N ++ G FL  K   A+   + M  RG   D+VTY  ++NG 
Sbjct: 171 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGL 230

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +   +D A  L  +M++  IE  V+ Y T+I G    +  DDA  +F++M++  ++P+ 
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDV 290

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            TY +L+  LC+ G+  +  ++L  M+ER I P +   F  L+    K G L  A  +  
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            MI+ SI  +   Y  LI  FC  +  D A  + + ++ K+    P         +YN +
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVV------TYNTL 401

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I+  C   +  +    FR++ ++G++ + V +N LI+G  + G+ D A +I K M   GV
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
           P D   Y  L++   + G+   A    + + +    P    +  ++E + + G+V+    
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           +  S+  KGVK N+ +   ++     +G  EEA      M + G++P+   +++L+    
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 581

Query: 563 EKGKTIAAVKLL 574
             G   A+ +L+
Sbjct: 582 RDGDKAASAELI 593



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 208/428 (48%), Gaps = 12/428 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + L++ +    K SE      + V+R      D  T+  ++  L + G ++ A  +L  M
Sbjct: 189 NTLIHGLFLHNKASEAVALVDQMVQRGC--QPDLVTYGAVVNGLCKRGDIDLALSLLKKM 246

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K  ++ D  ++  +I+   K   + ++  +F+ M+  G+   V +Y++L   +   GR+
Sbjct: 247 EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRW 306

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R  + M+   I P   T++ ++  F    KL  A + +++M  R I  D+ TY+++
Sbjct: 307 SDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING+    ++DEA+ +F  M  K+  P V++Y T+IKG+   +R ++ + +F EM    +
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             N VTY  L+ GL  AG     QK+ ++MV   +PP D   +  LL   CK G L  A 
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-DIITYSILLDGLCKYGKLEKAL 485

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V + + +  +  +   Y I+IE  CKA   +    L   L  K +  +P   +      
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV--KPNVII------ 537

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  MI   C  G   +A+  FR++ + G L D   +N LIR   ++G+  ++ E++K M 
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMR 597

Query: 442 RRGVPRDA 449
             G   DA
Sbjct: 598 SCGFVGDA 605



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 230/514 (44%), Gaps = 30/514 (5%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           ++D  ++  +I    R  +L  A  +L  M K G + D      L+  Y     + ++V 
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 171

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + D M ++G +    +++ L   +    +   A    ++M+  G +P   TY  ++ G  
Sbjct: 172 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLC 231

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               ++ A+   + M+   I  DVV YNT+I+G  ++K +D+A  LF +M+ K I P V 
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVF 291

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y ++I       R  DA R+   M    + PN VT++AL+      GK+VE +K+  EM
Sbjct: 292 TYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           ++R I P D   +  L+   C    L+ A  + + MI          Y  LI+ FCKA+ 
Sbjct: 352 IKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 353 YDRAIKLLDKLVEKEII------------LRPQSTLDM---------------EASSYNP 385
            +  ++L  ++ ++ ++            L      DM               +  +Y+ 
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 386 MIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++  LC  G+  KA + F  L K K   D   +N +I G  K G  +  +++   +  +G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V  +   Y  +I  + RKG   +A      M EDG  P S  + +++ +   DG    ++
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 590

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            ++K M   G   +   ++ ++  +L  G +E++
Sbjct: 591 ELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 623



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 221/453 (48%), Gaps = 11/453 (2%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           +  D  T   +I  L    K + A  ++  M ++G Q D   +  ++    K+G +  ++
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            +   M++  +E  V  Y+ +   + +      A   FNKM ++GI P   TYN ++   
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               +   A R   +M  R I+ +VVT++ +I+ + +  K+ EAEKL+ EM +++I+P +
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +Y+++I G+   +R D+A  +F+ M S D  PN VTY  L+ G C A ++ E  ++ RE
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M +R +   +   +  L+    ++G  + A  + K M+   +P +   Y IL++  CK  
Sbjct: 421 MSQRGL-VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             ++A+ + + L         +S ++ +  +YN MI+ +C  G+       F  L  KGV
Sbjct: 480 KLEKALVVFEYL--------QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             + + +  +I G  ++G  + A  + + M   G   D+  Y  LI + LR G+ A +  
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAE 591

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
            +  M   G    +S    V+ ++  DGR++ +
Sbjct: 592 LIKEMRSCGFVGDASTISMVI-NMLHDGRLEKS 623



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/544 (21%), Positives = 233/544 (42%), Gaps = 50/544 (9%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++ +F  M Q     S+  ++ L   I +  ++ +      +M +  I    ++YN+
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    +L  A+     M   G   D+VT ++++NGY   K++ +A  L  +M E  
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P  +++ T+I G     +A +A+ + D+M     +P+ VTY A++ GL          
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGL---------- 230

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
                                     CK G ++ A  +LK M +  I  +   Y  +I+ 
Sbjct: 231 --------------------------CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 264

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK +  D A  L +K+  K I  RP      +  +YN +I  LC+ G+   A      +
Sbjct: 265 LCKYKHIDDAFALFNKMETKGI--RP------DVFTYNSLISCLCNYGRWSDASRLLSNM 316

Query: 407 MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +++ + +P  V F+ LI    KEG    A ++   M +R +  D   Y  LI  +     
Sbjct: 317 IERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +AK   + MI     P    + ++++   +  RV+    + + M ++G+  N      
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           +++ L   G  + A      M+  G  P+   +  LL  L + GK   A+ + ++     
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
              D+ +Y  +++ +  AGK  + + +   +  KG   +      +I+G  ++G  ++AD
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555

Query: 642 ILSR 645
            L R
Sbjct: 556 ALFR 559


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 152/655 (23%), Positives = 289/655 (44%), Gaps = 51/655 (7%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W  + +  +R L+   +  LV  VL    +   AL FF W +R   + HD   +  M++I
Sbjct: 147 WNPKFEENLRHLLRSLNPRLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDI 206

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L +      AR IL  M ++G++   + F  ++ SY + G+++ +++I  +M++ GVE  
Sbjct: 207 LSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPD 266

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           +   +    ++++  +   A R+  +M   GIEP   +YN ++ G+    +++ A+    
Sbjct: 267 LSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIA 326

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVAV 244
           +M  +G   D V+Y T++    + +K++E ++L   M +  N+ P  ++Y T+I      
Sbjct: 327 EMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKH 386

Query: 245 ERADDALRIFDE-----------------------------------MKSFDVKPNAVTY 269
             ADDAL    E                                   M S    P+ VTY
Sbjct: 387 GHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTY 446

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           TA++ G C  GK+ E +K+L++M +    P +   +  LL   C +G    A +++    
Sbjct: 447 TAIIDGFCRVGKIDEAKKMLQQMYKHGCKP-NTVTYTVLLNGLCHNGKSLEAREMINVSE 505

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
                  A  Y  ++    +      A  L  +++EK  +  P   +D+     N +IQ 
Sbjct: 506 EHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNP---VDI-----NLLIQS 557

Query: 390 LCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC N     A+ +  + + KG  ++ V F ++I G  + G+ D+A  +++ M       D
Sbjct: 558 LCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPD 617

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
           A  Y  L ++  +K    +A   +  M+  G  P    +R+V+    + GRV    ++++
Sbjct: 618 AITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLE 677

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKG 565
            M+ +   +   +  +++E L   G+ EEA   LG++              L+      G
Sbjct: 678 KMIARQPFKT--VYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDG 735

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
             ++A K+      R+ I DL   EKV   L+  G    A  ++ + +E+G  T+
Sbjct: 736 NALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGIQTE 790


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/586 (23%), Positives = 264/586 (45%), Gaps = 59/586 (10%)

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
           H   + L  P K       + +  I +Y + G    + +IF  MK+L +  ++ + + L 
Sbjct: 124 HLSILRLTSPSKA------LLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLL 177

Query: 134 KLILR---RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE----- 185
             ++R         ++  FN  +  GI P  +T+N++++G+ L  K + A+ F       
Sbjct: 178 NSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY 237

Query: 186 ------------------------------DMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
                                         DMKSRG+  +  TYN ++ GY +   + EA
Sbjct: 238 NCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             +   M + N+ P V +Y  +I G     R ++A ++ DEM++  + P+ V+Y  L+ G
Sbjct: 298 ANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL-GVQCKSGHLNAAADVLKAMIRLSIP 334
             +  K+ E  K+L EM E+ + P  N+V   ++    CK G ++ A++ +  M      
Sbjct: 358 CLEWSKISEAFKLLEEMSEKGVKP--NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   Y  LI  +CKA     A + +D++  K         + M++ + N +++ LC   
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK--------NMKMDSVTLNTILRTLCREK 467

Query: 395 QTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +A        K+G  +D V++  LI G+ K+GN D A ++   M  + +      Y 
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           C+I    + G+   A + L+ ++E G  P  + + +++     +G V+ A +    MVE 
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAA 570
             K ++     +L  L M G +E+AL   +  +  G       +++L++ L ++G+   A
Sbjct: 588 SFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
             LL     ++   D  +Y  ++ AL  +G+   A   + K++EKG
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 255/557 (45%), Gaps = 55/557 (9%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGK------LNHARCILLDMPKKGVQWDE 91
           HA Q F+ ++R  L    R   L    +L  + +      ++ +R    D  K G+  + 
Sbjct: 153 HAFQIFKKMKRLRL----RPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNV 208

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
           + F ++I  Y  +   +++V+  ++M +        +Y+ +   + ++GR   A+     
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMD 268

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M S G+ P R+TYN++++G+     L+ A    E M    +  DV TYN +ING     +
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           ++EA KL  EM+   + P V+SY T+I G +   +  +A ++ +EM    VKPNAVT+  
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA---------- 321
           ++   C  GKM +    + +M E    P D   +  L+   CK+G++  A          
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSP-DCVTYNTLINGYCKAGNMGEAFRTMDEMGRK 447

Query: 322 ---------ADVLKAMIR----------LSIPTEAGH------YGILIENFCKAEMYDRA 356
                      +L+ + R          LS   + G+      YG LI  + K    DRA
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           +KL D++ EKEII  P +       +YN +I  LC  G+T +A     +L++ G+L D  
Sbjct: 508 LKLWDEMKEKEII--PSTV------TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDET 559

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N ++ G+ +EG+ + AF+    M       D      L+     +G    A    ++ 
Sbjct: 560 TYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTW 619

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +  G +  +  + +++ SL ++GR+  A  ++  M EK +  +      I+ AL   G +
Sbjct: 620 VSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI 679

Query: 536 EEALGRIDLMMQSGSVP 552
            EA   +  M++ G +P
Sbjct: 680 REAEEFMSKMLEKGXLP 696



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 200/449 (44%), Gaps = 18/449 (4%)

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG---YVAVERADDALRIFDE 256
           +T I  Y +  +   A ++F +MK   + P +++  T++     Y +      +   F++
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFND 198

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
                + PN  T+  ++ G C   K  +  + L  M +    P DN  +  +L   CK G
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSP-DNVTYNTILDALCKKG 257

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L  A D+L  M    +      Y IL+  +CK      A  +++        L  Q+ L
Sbjct: 258 RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE--------LMTQNNL 309

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK--KGVLDPVAFNNLIRGHSKEGNPDSAF 434
             +  +YN +I  LC+ G+  +A    R  M+  K + D V++N LI G  +      AF
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEA-FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           ++++ M  +GV  +A  +  +++ Y ++G+  DA   +  M E G SP    + +++   
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            + G +  A R M  M  K +K +   +  IL  L     +EEA   +    + G   + 
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             + +L+    + G    A+KL D    ++ I    +Y  ++  L   GKT  A S L +
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++E G + D  + + ++ G  +EG+ ++A
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKA 577


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 164/721 (22%), Positives = 309/721 (42%), Gaps = 106/721 (14%)

Query: 18  VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE--THLKMIEILGRVGKLNHA 75
           VP    ++V  ++    NS    +FF W  +   F   R   +H  +I++L +       
Sbjct: 54  VPFLSPSIVTYIIKNPPNSLLGFRFFIWASK---FRRLRSWVSHNMIIDMLIKDNGFELY 110

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             +L ++ + G     D F VLI++Y K  +++++V+ F++MK    +  V +Y+ +  +
Sbjct: 111 WQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHV 170

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           ++R+   ++A   +N+ML     P   T+++++ G   S K + A++ F++M  R I  +
Sbjct: 171 MVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPN 230

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI-- 253
            +TY  +I+G  + +K D A +LF  MK+    P  ++Y  ++ G+  + R D+AL +  
Sbjct: 231 KITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLK 290

Query: 254 ---------------------------------FDEMKSFDVKPNAVTYTALLPGLCDAG 280
                                            + +M   ++KP+ + YT ++ GL  AG
Sbjct: 291 YFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAG 350

Query: 281 KMVEVQKVLREMVERYIPPKDN----------------------------------SVFM 306
           K  +  ++L EM ER + P  +                                    + 
Sbjct: 351 KFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYT 410

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL--- 363
            L+   C+SG +  A  +   M +         +  LI+ FCKA   ++A  L  K+   
Sbjct: 411 ILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIG 470

Query: 364 VEKEIILRPQSTLD--MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
               + LR     +  ++ +S   M++ LC +G   KA     QL   G   + + +N L
Sbjct: 471 RNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNIL 530

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  K GN + AF++ K +  +G+  D+  Y  LI   L      DA T LD ++++G 
Sbjct: 531 IHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGC 590

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVM----------KSMVEKGVKENLDLVAKILEALL 530
           +P + +++S M       ++  A  +            S V K V+EN +          
Sbjct: 591 TPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFE---------- 640

Query: 531 MRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            +G VEEA   L  +D  +    +  +   L  L + G+   A+K+       + ++   
Sbjct: 641 -KGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPP 699

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL--NQEGNTKQADILSR 645
           S  K++  LL  G    A  I    ++KG +   +  ++L+  L  +++   +  D+LSR
Sbjct: 700 SCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLRSEDKRNRAFDLLSR 759

Query: 646 M 646
           M
Sbjct: 760 M 760


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 158/654 (24%), Positives = 287/654 (43%), Gaps = 36/654 (5%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           +R L+P    + V ++     + + AL FF W+     F H+  ++  M+ IL R   L 
Sbjct: 59  LRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLG 118

Query: 74  HARCILLDMPKKGVQWDEDMF-----------------------EVLIESYGKKGIVQES 110
            A  I + M K     ++ +F                         ++ S  K  ++ E 
Sbjct: 119 VAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEM 178

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             ++  +    +  ++ +++A+     + G  + A+ Y +K++  G+ P   TY  ++ G
Sbjct: 179 KTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILG 238

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
              +  ++ A   F  M  +G   + V+Y  +I+G     +++EA KLFA+M E N  PT
Sbjct: 239 HCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPT 298

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V +YT +I       R  +AL +F+EMK    +PN  TYT L+ GLC   KM E +K+L 
Sbjct: 299 VRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           EM E+ + P   + +  L+   CK G ++ A ++L  M   S       Y  LI   CK 
Sbjct: 359 EMSEKGLIPSVVT-YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKK 417

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
               +A+ LL+K++E++  L P         +YN +I   C       A      + + G
Sbjct: 418 RKVHKAMALLNKMLERK--LSPSLI------TYNSLIHGQCKVNDLESAYRLLSLMNENG 469

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           ++ D   ++  I    KEG  + A  +   +  +GV  +   Y  LI+ Y + G+   A 
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
           + L+ M+ D   P S  +  ++E L ++ +++ AS ++  M+  GVK  +     ++  +
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
           L  G  + AL   + M+  G  P+   + + L     +G       ++        + DL
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +Y  ++D     G T  A+  L  +++ G          LI  L+ E   K+ 
Sbjct: 650 VTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 246/580 (42%), Gaps = 24/580 (4%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+    ++G +  A      + + G+  D   +  LI  + +   V  + ++F IM Q G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            +R+  SY  L   +   GR   A + F  M  +   PT  TY V+++    S +   A+
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F +MK +G   +V TY  +I+G  +  KMDEA K+ +EM EK + P+V++Y  +I GY
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 DDA  I D M+S    PN  TY  L+ GLC   K+ +   +L +M+ER + P  
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + +  L+  QCK   L +A  +L  M    +  +   Y + I+  CK    + A  L D
Sbjct: 440 IT-YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            +  K +              Y  +I   C  G+   A     +++    L +   +N L
Sbjct: 499 SVKAKGV--------KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  KE     A  +V  M   GV      Y  LI   L+ G    A    + M+  G+
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    + + + + F  G ++    V+  M E+G+  +L     +++     G    A  
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFD 670

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            +  M+ +G  P+   ++S+L +       +K     +G D + +   YE  L       
Sbjct: 671 FLKCMVDTGCKPSL-YIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIAL------- 722

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
                  +  K++E G   D      LIAG  Q+   ++A
Sbjct: 723 ------KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEA 756



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 252/566 (44%), Gaps = 59/566 (10%)

Query: 44  RWVERAGLFNHDRE--------THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           R VE   LFN  +E        T+  +I+ L +  K++ AR +L +M +KG+      + 
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI+ Y K+G++ ++ +I D+M+      + ++Y+ L   + ++ +   A    NKML  
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            + P+  TYN ++ G      LE+A R    M   G+  D  TY+  I+   +  +++EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             LF  +K K ++   + YT +I GY  V + D A  + + M +    PN+ TY  L+ G
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC   KM E   ++ +M+   + P   + +  L+G   K G  + A  V   M+ L    
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVT-YTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII-------------------------L 370
           +   Y   +  +    M +    ++ K+ E+ I+                         L
Sbjct: 613 DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672

Query: 371 RPQSTLDMEASSY--NPMIQHLCHNG--QTGKAEI----------------FFRQLMKKG 410
           +       + S Y  + +I++L H    +  ++EI                 F ++++ G
Sbjct: 673 KCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHG 732

Query: 411 V-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
             +D   +  LI G  ++   + A  +V  M  RG+    D Y  L++   + G  A+A 
Sbjct: 733 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAV 792

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA--KILE 527
             +D+M+E+G  P    ++ ++  L+ +G  + A  V   ++  G   N D VA   +++
Sbjct: 793 RLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY--NYDEVAWKVLID 850

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN 553
            LL R  V+E    ID+M + G  PN
Sbjct: 851 GLLKRDLVDECSELIDIMEEKGCQPN 876



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/501 (22%), Positives = 215/501 (42%), Gaps = 37/501 (7%)

Query: 171 FFLSLKLETAIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKL----------- 218
           F  +L  +TA+ FF  +  R G   +V +Y++M+N   R + +  AEK+           
Sbjct: 75  FAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSI 134

Query: 219 ---------FAEMK---EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
                    F +M    E   +PT+  Y T++         D+   ++ E+ +  + PN 
Sbjct: 135 EDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNI 194

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            T+ A++ G C  G +VE +    ++V+  + P D   +  L+   C++  ++ A +V  
Sbjct: 195 YTFNAMVNGYCKIGNVVEAELYASKIVQAGLHP-DTFTYTSLILGHCRNKGVDNAYEVFL 253

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M +         Y  LI   C+A   + A+KL   + E      P         +Y  +
Sbjct: 254 IMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCC--PT------VRTYTVL 305

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  L  +G+  +A   F ++ +KG    V  +  LI G  KE   D A +++  M  +G+
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
                 Y  LI+ Y ++G   DA   LD M  +   P +  +  ++  L +  +V  A  
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           ++  M+E+ +  +L     ++        +E A   + LM ++G VP+   +   +  L 
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           ++G+   A  L D    +    +   Y  ++D     GK   AYS+L +++    + +  
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545

Query: 623 SSDKLIAGLNQEGNTKQADIL 643
           + + LI GL +E   K+A  L
Sbjct: 546 TYNVLIEGLCKEKKMKEASSL 566


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 158/654 (24%), Positives = 287/654 (43%), Gaps = 36/654 (5%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           +R L+P    + V ++     + + AL FF W+     F H+  ++  M+ IL R   L 
Sbjct: 59  LRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLG 118

Query: 74  HARCILLDMPKKGVQWDEDMF-----------------------EVLIESYGKKGIVQES 110
            A  I + M K     ++ +F                         ++ S  K  ++ E 
Sbjct: 119 VAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEM 178

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             ++  +    +  ++ +++A+     + G  + A+ Y +K++  G+ P   TY  ++ G
Sbjct: 179 KTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILG 238

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
              +  ++ A   F  M  +G   + V+Y  +I+G     +++EA KLFA+M E N  PT
Sbjct: 239 HCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPT 298

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V +YT +I       R  +AL +F+EMK    +PN  TYT L+ GLC   KM E +K+L 
Sbjct: 299 VRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           EM E+ + P   + +  L+   CK G ++ A ++L  M   S       Y  LI   CK 
Sbjct: 359 EMSEKGLIPSVVT-YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKK 417

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
               +A+ LL+K++E++  L P         +YN +I   C       A      + + G
Sbjct: 418 RKVHKAMALLNKMLERK--LSPSLI------TYNSLIHGQCKVNDLESAYRLLSLMNENG 469

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           ++ D   ++  I    KEG  + A  +   +  +GV  +   Y  LI+ Y + G+   A 
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
           + L+ M+ D   P S  +  ++E L ++ +++ AS ++  M+  GVK  +     ++  +
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
           L  G  + AL   + M+  G  P+   + + L     +G       ++        + DL
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +Y  ++D     G T  A+  L  +++ G          LI  L+ E   K+ 
Sbjct: 650 VTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/585 (25%), Positives = 251/585 (42%), Gaps = 23/585 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+    ++G +  A      + + G+  D   +  LI  + +   V  + ++F IM Q G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            +R+  SY  L   +   GR   A + F  M  +   PT  TY V+++    S +   A+
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F +MK +G   +V TY  +I+G  +  KMDEA K+ +EM EK + P+V++Y  +I GY
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 DDA  I D M+S    PN  TY  L+ GLC   K+ +   +L +M+ER + P  
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + +  L+  QCK   L +A  +L  M    +  +   Y + I+  CK    + A  L D
Sbjct: 440 IT-YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            +  K +              Y  +I   C  G+   A     +++    L +   +N L
Sbjct: 499 SVKAKGV--------KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  KE     A  +V  M   GV      Y  LI   L+ G    A    + M+  G+
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    + + + + F  G ++    V+  M E+G+  +L     +++     G    A  
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFD 670

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI-----IDLASYEKVLDA 595
            +  M+ +G  P+   ++S+L +       +K     +G D +     +D+A   K L+ 
Sbjct: 671 FLKCMVDTGCKPSL-YIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEY 729

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +       A  +  K++E G   D      LIAG  Q+   ++A
Sbjct: 730 EI-------ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEA 767



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 145/644 (22%), Positives = 274/644 (42%), Gaps = 82/644 (12%)

Query: 44  RWVERAGLFNHDRE--------THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           R VE   LFN  +E        T+  +I+ L +  K++ AR +L +M +KG+      + 
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI+ Y K+G++ ++ +I D+M+      + ++Y+ L   + ++ +   A    NKML  
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            + P+  TYN ++ G      LE+A R    M   G+  D  TY+  I+   +  +++EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             LF  +K K ++   + YT +I GY  V + D A  + + M +    PN+ TY  L+ G
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC   KM E                                    A+ ++  M+ + +  
Sbjct: 554 LCKEKKMKE------------------------------------ASSLVAKMLTMGVKP 577

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y ILI    K   +D A+K+ + +V   +  +P      +  +Y   +      G 
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMV--SLGYQP------DVCTYTAFLHAYFSQGM 629

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             + +    ++ ++G+L D V +  LI G+++ G    AF+ +K M   G          
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI++   +    + ++      E G    S++    +  +++    + A ++ + MVE G
Sbjct: 690 LIKNLSHENRMKETRS------EIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHG 743

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
              ++ +   ++     +  +EEA G +  M + G  P+   ++SLL    + G    AV
Sbjct: 744 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAV 803

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD---WK------ 622
           +L+D  +    +  L SY+ ++  L   G    A ++   ++  G   D   WK      
Sbjct: 804 RLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 863

Query: 623 -------SSDKLIAGLNQEGNTKQADI----LSRMIRGEMSRGS 655
                     +LI  + ++  T QADI    L R+     ++G+
Sbjct: 864 LKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGA 907



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/501 (22%), Positives = 215/501 (42%), Gaps = 37/501 (7%)

Query: 171 FFLSLKLETAIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKL----------- 218
           F  +L  +TA+ FF  +  R G   +V +Y++M+N   R + +  AEK+           
Sbjct: 75  FAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSI 134

Query: 219 ---------FAEMK---EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
                    F +M    E   +PT+  Y T++         D+   ++ E+ +  + PN 
Sbjct: 135 EDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNI 194

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            T+ A++ G C  G +VE +    ++V+  + P D   +  L+   C++  ++ A +V  
Sbjct: 195 YTFNAMVNGYCKIGNVVEAELYASKIVQAGLHP-DTFTYTSLILGHCRNKGVDNAYEVFL 253

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M +         Y  LI   C+A   + A+KL   + E      P         +Y  +
Sbjct: 254 IMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCC--PT------VRTYTVL 305

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  L  +G+  +A   F ++ +KG    V  +  LI G  KE   D A +++  M  +G+
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
                 Y  LI+ Y ++G   DA   LD M  +   P +  +  ++  L +  +V  A  
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           ++  M+E+ +  +L     ++        +E A   + LM ++G VP+   +   +  L 
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           ++G+   A  L D    +    +   Y  ++D     GK   AYS+L +++    + +  
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545

Query: 623 SSDKLIAGLNQEGNTKQADIL 643
           + + LI GL +E   K+A  L
Sbjct: 546 TYNVLIEGLCKEKKMKEASSL 566


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 153/658 (23%), Positives = 283/658 (43%), Gaps = 72/658 (10%)

Query: 12  NKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR--- 68
           ++++ L PQ   + V  ++   K++E  +QFF W+ +   + H+    + M+  L R   
Sbjct: 64  SELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRV 123

Query: 69  VGKLNHARCILL-----------------DMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
               +H R +++                 ++   G  +       L+    K  +V+ + 
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            ++  M   G++ S+ +++ L  ++ ++G+   A+   +++    + P   TY  ++ G 
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             +  L+ A   F+ M   G   + VTY+T+ING     ++DEA  +  EM EK IEPTV
Sbjct: 244 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 303

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +YT  I    A+E  ++A+ +   MK    +PN  TYTAL+ GL   GK          
Sbjct: 304 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK---------- 353

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
                                     L  A  +   M++  +      Y  LI   C   
Sbjct: 354 --------------------------LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
            +  A+K+   +     +   Q        +YN +I+ LC  G   KA + F +++K G 
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQ--------TYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439

Query: 412 LDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
           L   V +N LI G+  +GN ++A  ++ +M   G   D   Y  L+  + + G+   A  
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
               M+E G +P    + ++++   +DG+V  A  ++K M E G   N++    ++  L 
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
                 EA    D M++ G +PN   + +L+  L   G+T  A K+      R C+ +L 
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
           +Y  ++  L   GK   A     ++ E G      +   L++GL ++G   +A+ L +
Sbjct: 620 TYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVK 673



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 252/553 (45%), Gaps = 44/553 (7%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L   G+++ A  +L +M +KG++     + + I +       +E++++   M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+ G   +V++Y AL   + R G+  +A   ++KML EG+ P   TYN ++    +  + 
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            TA++ F  M+  G   +  TYN +I G      +++A  LF +M +    PTV++Y T+
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY+     ++A R+ D MK    +P+  TY  L+ G    GK+       +EMVE  +
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P   S +  L+    K G ++ A  +LK M  +        Y  +I    K   +  A 
Sbjct: 510 NPNPVS-YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-A 416
           K+ DK+VE+ ++  P         +Y  +I  LC NG+T  A   F  + K+  L  +  
Sbjct: 569 KICDKMVEQGLL--PNVI------TYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 417 FNNLIRGHSKEGNPDSAF-------------------------------EIVKIMGRRGV 445
           +++LI G  +EG  D A                                ++VK M  RG 
Sbjct: 621 YSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 680

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D + Y  L+ ++ +  E   A     S+   G     S++R+++ +L + G+V+ A  
Sbjct: 681 CPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQA 740

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV---LS 562
           +  +M+EK    +  +   +++ LL  G ++  +  + +M      PN  + + +   LS
Sbjct: 741 LFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELS 800

Query: 563 EKGKTIAAVKLLD 575
             GK+I +  L D
Sbjct: 801 RIGKSIESEPLAD 813



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 213/463 (46%), Gaps = 18/463 (3%)

Query: 16  ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
            LVP    +N + N L        AL+ F W+E  G    + +T+ ++I+ L   G +  
Sbjct: 368 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL-ANTQTYNEIIKGLCLGGDIEK 426

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +   M K G       +  LI  Y  KG V  + ++ D+MK+ G E    +Y+ L  
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
              + G+   A  YF +M+  G+ P   +Y  ++ G     K++ A+   + M+  G + 
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNP 546

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           +V +YN +ING ++  +  EAEK+  +M E+ + P VI+YTT+I G     R   A +IF
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            +M+     PN  TY++L+ GLC  GK  E +++     E   P  D   +  L+   C+
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCE---PTLD--TYSTLVSGLCR 661

Query: 315 SGHLNAAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
            G    A  ++K M  R   P    +Y +LI + CK    D A+K+   +  K       
Sbjct: 662 KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAH-CKNLEVDHALKIFHSIEAK------- 713

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDS 432
               +  S Y  +I  LC  GQ  +A+  F  +++K    D + +  L+ G  KEG  D 
Sbjct: 714 -GFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDL 772

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
             +++ IM  +    +   Y+ L     R G+  +++   D +
Sbjct: 773 CMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 211/464 (45%), Gaps = 14/464 (3%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           +T+  +I  L R+GKL  A  +   M K+G+  +   +  LI      G    ++KIF  
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M+  G   + ++Y+ + K +   G    A   F KML  G  PT  TYN ++ G+     
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +  A R  + MK  G   D  TYN +++G++++ K++ A   F EM E  + P  +SYT 
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G+    + D AL +   M+     PN  +Y A++ GL    +  E +K+  +MVE+ 
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P +   +  L+   C++G    A  +   M +         Y  LI   C+    D A
Sbjct: 579 LLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
            ++       EI   P  TLD    +Y+ ++  LC  G+  +AE   + + ++G   D  
Sbjct: 638 ERM------SEIGCEP--TLD----TYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 685

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            + +L+  H K    D A +I   +  +G       Y  LI +  + G+  +A+   D+M
Sbjct: 686 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 745

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
           +E   +    ++  +++ L ++G +    +++  M  K    N+
Sbjct: 746 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNI 789


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 148/657 (22%), Positives = 299/657 (45%), Gaps = 14/657 (2%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           AW  +L+ ++R L+       V  VL    +   AL+FF W +R   + HD   +  M+E
Sbjct: 83  AWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLE 142

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           IL +      A+ +L  M K+ ++   + F  ++ SY + G ++ ++++  +M++ G+E 
Sbjct: 143 ILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEP 202

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
            +   +    +++   R   A R+  +M    IEP   TYN ++ G+    +LE A+   
Sbjct: 203 DLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELI 262

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVA 243
            +M  +G S D ++Y T++    + K++ E   L  +M K+ N+ P  ++Y T +     
Sbjct: 263 AEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSK 322

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
               D+AL    E +    + + V Y+A++   C  G+M + ++++ EM  +   P D  
Sbjct: 323 HGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP-DVV 381

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  ++   C+   ++ A  +L+ M +         Y  L+   CK      A ++++  
Sbjct: 382 TYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMS 441

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
            E   I  P       A +Y+ ++      G++ +A    R+++KKG    PV  N LI+
Sbjct: 442 EEDWWI--PN------AITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQ 493

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
              +E   D A   ++     G   +   +  +I  + +K +   A + LD M      P
Sbjct: 494 SLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHP 553

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               + +++++L + GR++ A+++   M+  G+         ++      G VE+ L  +
Sbjct: 554 DVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLL 613

Query: 543 DLMMQSGSVPN-FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           + M+        ++ ++  L   G    A KLL   L     ID  +   ++++ L+ G 
Sbjct: 614 EKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGI 673

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD--ILSRMIRGEMSRGSQ 656
            L +Y++  ++  +  + D K  +K+   L  EG +++AD  IL  + RG +S   Q
Sbjct: 674 PLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQCQ 730


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 147/596 (24%), Positives = 271/596 (45%), Gaps = 27/596 (4%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++    R G+++ A+    +M  K +  +  +  +LI+   K     ++++ F
Sbjct: 8   DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  G+      Y AL   + +  R   A    ++M   G EP   TYN ++ G   +
Sbjct: 68  RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK-------NI 227
            + + A   FE MKS   S  +VTYNT+++G  R  K++ A  LF EM ++         
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P VI+Y+ +I G     R   A+ + + MK+    P+ +TYT L+ GLC   K+    +
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           VLREM++    P +   +  LL   C++  ++ A  +++ M           YG LI+  
Sbjct: 248 VLREMLDAGCVP-NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           CK      A  +L  +++K        T D+    YN +I  LC   Q  ++    R+ +
Sbjct: 307 CKVGRVKDACAMLADMIDK------GGTPDLMI--YNMLINGLCKADQVDESIALLRRAV 358

Query: 408 KKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
             G+  D V ++++I G  +    D A  ++  +  RG P D   Y  LI+   + G+  
Sbjct: 359 SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVD 418

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A    + M  DG       + ++++ L + GRV  A  ++  MV  G   +      ++
Sbjct: 419 EAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 478

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
           + L    H++EA+  ++ M +S   P+   ++ L+  +    +  +AV LL+    R C+
Sbjct: 479 KGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKAR-CV 537

Query: 584 ------IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                 +D  +Y  ++D L  AG+   A     ++++ G + D  +   L+ GL +
Sbjct: 538 AAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKK 593



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 13/370 (3%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYN-VLHG---AKNSEHALQFFRWVERAGLFNHDRETHL 60
           AW    +      VP     + YN +LHG   A+    AL   R +   G    +  T+ 
Sbjct: 245 AWEVLREMLDAGCVPNL---VTYNSLLHGLCRARRVSDALALMRDMTCRGC-TPNVVTYG 300

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            +I+ L +VG++  A  +L DM  KG   D  ++ +LI    K   V ES+ +       
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 360

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G++  V +Y ++   + R  R   A R    + S G  P    Y+ ++ G   + K++ A
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
              +E M   G   DVVTY+T+I+G  +  ++DEA  L A M      P+ ++Y ++IKG
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              +   D+A+ + +EM+  +  P+AVTY  L+ G+C   ++     +L +   R +   
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAG 540

Query: 301 ----DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA-EMYDR 355
               D   +  L+   CK+G +  A D  + MI   +  +   Y IL+E   K+ ++++ 
Sbjct: 541 GTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHEL 600

Query: 356 AIKLLDKLVE 365
              +LD++V+
Sbjct: 601 RHLVLDQMVQ 610


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 175/721 (24%), Positives = 309/721 (42%), Gaps = 95/721 (13%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILG 67
           R  N I  L   F  ++V  VL   + N   +L FF++V +   F  + +++ K++ IL 
Sbjct: 20  RRCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILS 79

Query: 68  RVGKLNHARCIL---LDMPK----KGVQWDE------------DMFEVLIESYGKKGIVQ 108
           R    +  R  L   +D+ K      V WDE             +F+++++ Y +KG+ +
Sbjct: 80  RGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTK 139

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
            ++ +FD M + G   S++S ++L   +++ G    A   + +M+  GI P     ++M+
Sbjct: 140 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 199

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
             F    K++ A  F + M++ G+  ++VTY+++INGY     ++ A+ +   M EK + 
Sbjct: 200 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS 259

Query: 229 PTVISYTTMIKGY----------------------VAVERA--------------DDALR 252
             V++YT +IKGY                      V  ERA              DDA+R
Sbjct: 260 RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVR 319

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           + DEM    +K N     +L+ G C  G++ E + V+  MV+  + P D+  +  LL   
Sbjct: 320 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP-DSYSYNTLLDGY 378

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK-------------- 358
           C+ GH + A ++   M++  I      Y  L++  C+   +D A++              
Sbjct: 379 CREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDE 438

Query: 359 -----LLDKLVEKEIILRPQSTL--DMEAS-------SYNPMIQHLCHNGQTGKAEIFFR 404
                LLD L + E      STL  D+ A        ++N MI  LC  G+  +AE  F 
Sbjct: 439 VGYSTLLDGLFKMEN-FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 497

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           ++   G   D + +  LI G+ K  N   AF++   M R  +    + Y  LI    +  
Sbjct: 498 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 557

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              +    L  M   G +P    + ++++   ++G +  A      M E G+  N+ + +
Sbjct: 558 RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 617

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
            ++  L   G ++EA   +  M+  G  P+ +  L    +     AA++ +   L   C 
Sbjct: 618 TMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFL----KSDIRYAAIQKIADSLDESCK 673

Query: 584 IDLAS----YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
             L      Y   +  L   GK  +A      +  KG V D  +   LI G +  GN  +
Sbjct: 674 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 733

Query: 640 A 640
           A
Sbjct: 734 A 734



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 229/493 (46%), Gaps = 40/493 (8%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+++ A  ++  M    ++ D   +  L++ Y ++G   E+  + D M Q G+E +V +Y
Sbjct: 347 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 406

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L K + R G +  A + ++ M+  G+ P    Y+ +L G F     E A   ++D+ +
Sbjct: 407 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 466

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           RG +   +T+NTMI+G  +  KM EAE++F +MK+    P  I+Y T+I GY        
Sbjct: 467 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 526

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A ++   M+   + P+   Y +L+ GL  + ++VEV  +L EM  R + P +   +  L+
Sbjct: 527 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP-NIVTYGALI 585

Query: 310 GVQCKSGHLNAA-------------------ADVLKAMIRLSIPTEAG-------HYGIL 343
              CK G L+ A                   + ++  + RL    EA         +G  
Sbjct: 586 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 645

Query: 344 IENFC--KAEMYDRAI-KLLDKLVEK-EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
            ++ C  K+++   AI K+ D L E  +  L P + +      YN  I  LC  G+   A
Sbjct: 646 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV------YNIAIAGLCKTGKVDDA 699

Query: 400 EIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
             FF  L  KG V D   +  LI G+S  GN D AF +   M RRG+  +   Y  LI  
Sbjct: 700 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING 759

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             +      A+     + + G  P    + ++++   + G +  A ++   M+E+G+  +
Sbjct: 760 LCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 819

Query: 519 LDLVAKILEALLM 531
           +     +LE++ M
Sbjct: 820 IQ--CNLLESVSM 830



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 129/542 (23%), Positives = 229/542 (42%), Gaps = 26/542 (4%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A +  R ++       D   +  +I+   R GK++ A  +L +M + G++ +  +   
Sbjct: 279 DEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS 338

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI  Y K+G + E+  +   M    ++    SY+ L     R G    A    +KML EG
Sbjct: 339 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 398

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           IEPT  TYN +L G       + A++ +  M  RG++ D V Y+T+++G  + +  + A 
Sbjct: 399 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 458

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L+ ++  +    + I++ TMI G   + +  +A  IFD+MK     P+ +TY  L+ G 
Sbjct: 459 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 518

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C A  + +  KV   M    I P    ++  L+    KS  L    D+L  M    +   
Sbjct: 519 CKASNVGQAFKVKGAMEREPISPSI-EMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPN 577

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY--------NPMIQ 388
              YG LI+ +CK  M D+A     ++ E  +         M +  Y        N ++Q
Sbjct: 578 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQ 637

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPVA-----------------FNNLIRGHSKEGNPD 431
            +  +G     E F +  ++   +  +A                 +N  I G  K G  D
Sbjct: 638 KMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVD 697

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A     ++  +G   D   Y  LI  Y   G   +A    D M+  G  P    + +++
Sbjct: 698 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALI 757

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
             L +   V  A R+   + +KG+  N+     +++     G+++ A    D M++ G  
Sbjct: 758 NGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGIS 817

Query: 552 PN 553
           P+
Sbjct: 818 PS 819


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 223/486 (45%), Gaps = 43/486 (8%)

Query: 62   MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
            +I  + ++G++N A  +LL M  KG   D   +  +I  Y + G + +  K+ + MKQ G
Sbjct: 675  VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKG 734

Query: 122  VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            ++ +  +Y ++  L+ R  +   A+  F++M+ +GI P    Y  ++ GF     +  A 
Sbjct: 735  LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAAS 794

Query: 182  RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            +FF +M SR I+ DV+TY  +I+G+ +   M EA KLF EM  + +EP +I++T ++ GY
Sbjct: 795  KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGY 854

Query: 242  VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK- 300
                   DA R+ + M      PN VTYT L+ GLC  G +    ++L EM +  + P  
Sbjct: 855  CKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 914

Query: 301  ---------------------------------DNSVFMKLLGVQCKSGHLNAAADVLKA 327
                                             D   +  L+   CKSG ++ A ++L  
Sbjct: 915  FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTE 974

Query: 328  MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
            M+   +      + +L+  FC   M +   KLL+ ++ K I   P +T      ++N ++
Sbjct: 975  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI--APNAT------TFNCLV 1026

Query: 388  QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
            +  C       A   ++ +  +GV  D   + NL++GH    N   A+ + + M  +G  
Sbjct: 1027 KQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFS 1086

Query: 447  RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
                 Y  LI+ + ++ +  +A+   D M  DG +    +F    ++ ++  R  T    
Sbjct: 1087 VSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDP 1146

Query: 507  MKSMVE 512
            +  ++E
Sbjct: 1147 IDEIIE 1152



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 234/519 (45%), Gaps = 14/519 (2%)

Query: 62   MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKK-GIVQESVKIFDIMKQL 120
              ++L   G L  AR +   M   G+    D   V +    K       ++ +F    ++
Sbjct: 604  FFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEV 663

Query: 121  GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
            GV  +V SY+ +   + + GR   A      M  +G  P   +Y+ ++ G+    +L+  
Sbjct: 664  GVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKV 723

Query: 181  IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
             +  E MK +G+  +  TY ++I    R  K+ EAE+ F+EM  + I P  I YTT++ G
Sbjct: 724  WKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDG 783

Query: 241  YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
            +        A + F EM S D+ P+ +TYTA++ G C  G MVE  K+  EM+ R + P 
Sbjct: 784  FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEP- 842

Query: 301  DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
            D   F +L+   CK+GH+  A  V   MI+         Y  LI+  CK    D A +LL
Sbjct: 843  DIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 902

Query: 361  DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
             ++   +I L+P         +YN ++  LC +G   +A     +    G+  D V +  
Sbjct: 903  HEM--WKIGLQPN------IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 954

Query: 420  LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            L+  + K G  D A EI+  M  +G+      +  L+  +   G   D +  L+ M+  G
Sbjct: 955  LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1014

Query: 480  HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             +P ++ F  +++       ++ A+ + K M  +GV+ +      +++      +++EA 
Sbjct: 1015 IAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAW 1074

Query: 540  GRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLD 575
                 M   G   SV  +  L+    ++ K + A ++ D
Sbjct: 1075 FLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFD 1113



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/481 (22%), Positives = 218/481 (45%), Gaps = 12/481 (2%)

Query: 71   KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            K   A  +  + P+ GV W+   + ++I    + G + E+  +  +M+  G    V SY 
Sbjct: 649  KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYS 708

Query: 131  ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
             +     R G      +   KM  +G++P  +TY  ++       KL  A   F +M  +
Sbjct: 709  TVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQ 768

Query: 191  GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
            GI  D + Y T+++G+ +   +  A K F EM  ++I P V++YT +I G+  +    +A
Sbjct: 769  GILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 828

Query: 251  LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
             ++F EM    ++P+ +T+T L+ G C AG + +  +V   M++    P +   +  L+ 
Sbjct: 829  GKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSP-NVVTYTTLID 887

Query: 311  VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
              CK G L++A ++L  M ++ +      Y  ++   CK+   + A+KL+ +        
Sbjct: 888  GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF------- 940

Query: 371  RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEG 428
               + L+ +  +Y  ++   C +G+  KA+    +++ KG L P  V FN L+ G    G
Sbjct: 941  -EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG-LQPTIVTFNVLMNGFCLHG 998

Query: 429  NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
              +   +++  M  +G+  +A  + CL++ Y  +     A      M   G  P    + 
Sbjct: 999  MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYE 1058

Query: 489  SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            ++++       ++ A  + + M  KG   ++   + +++    R    EA    D M + 
Sbjct: 1059 NLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRD 1118

Query: 549  G 549
            G
Sbjct: 1119 G 1119



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 165/389 (42%), Gaps = 44/389 (11%)

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            T+  +I +L R+ KL  A     +M  +G+  D  ++  L++ + K+G ++ + K F  M
Sbjct: 741  TYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM 800

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
                +   V +Y A+     + G  + A + F++ML  G+EP   T+  ++ G+  +  +
Sbjct: 801  HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHI 860

Query: 178  ETAIRFFEDMKSRGISLDVVTY-----------------------------------NTM 202
            + A R    M   G S +VVTY                                   N++
Sbjct: 861  KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 920

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            +NG  +   ++EA KL  E +   +    ++YTT++  Y      D A  I  EM    +
Sbjct: 921  VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGL 980

Query: 263  KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            +P  VT+  L+ G C  G + + +K+L  M+ + I P + + F  L+   C   +L AA 
Sbjct: 981  QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNCLVKQYCIRNNLKAAT 1039

Query: 323  DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
             + K M    +  +   Y  L++  C A     A  L  ++  K           +  S+
Sbjct: 1040 AIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGK--------GFSVSVST 1091

Query: 383  YNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
            Y+ +I+      +  +A   F Q+ + G+
Sbjct: 1092 YSVLIKGFFKRKKFVEAREIFDQMRRDGL 1120



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 7/218 (3%)

Query: 6    WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
            W   LQ  I      F +N + N L  + N E A++     E AGL N D  T+  +++ 
Sbjct: 906  WKIGLQPNI------FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL-NADTVTYTTLMDA 958

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
              + G+++ A+ IL +M  KG+Q     F VL+  +   G++++  K+ + M   G+  +
Sbjct: 959  YCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1018

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
              +++ L K    R     A   +  M S G+EP   TY  ++ G   +  ++ A   F+
Sbjct: 1019 ATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQ 1078

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
            +MK +G S+ V TY+ +I G+ + KK  EA ++F +M+
Sbjct: 1079 EMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 224/486 (46%), Gaps = 43/486 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  + ++G++  A  +LL M  KG   D   +  ++  Y + G + +  K+ ++MK+ G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +   Y ++  L+ R  +   A+  F++M+ +GI P    Y  ++ GF     +  A 
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +FF +M SR I+ DV+TY  +I+G+ +   M EA KLF EM  K +EP  +++T +I GY
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK- 300
                  DA R+ + M      PN VTYT L+ GLC  G +    ++L EM +  + P  
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491

Query: 301 ---------------------------------DNSVFMKLLGVQCKSGHLNAAADVLKA 327
                                            D   +  L+   CKSG ++ A ++LK 
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M+   +      + +L+  FC   M +   KLL+ ++ K I   P +T      ++N ++
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI--APNAT------TFNSLV 603

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
           +  C       A   ++ +  +GV  D   + NL++GH K  N   A+ + + M  +G  
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
                Y  LI+ +L++ +  +A+   D M  +G +    +F    ++ ++  R  T    
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDP 723

Query: 507 MKSMVE 512
           +  ++E
Sbjct: 724 IDEIIE 729



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 234/519 (45%), Gaps = 14/519 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI-VQESVKIFDIMKQL 120
             ++L   G L  AR +   M   G+    D   V +    K       ++ +F    ++
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV 240

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           GV  +V SY+ +   + + GR   A      M  +G  P   +Y+ ++ G+    +L+  
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            +  E MK +G+  +   Y ++I    R  K+ EAE+ F+EM  + I P  + YTT+I G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +        A + F EM S D+ P+ +TYTA++ G C  G MVE  K+  EM  + + P 
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP- 419

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D+  F +L+   CK+GH+  A  V   MI+         Y  LI+  CK    D A +LL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
            ++   +I L+P         +YN ++  LC +G   +A     +    G+  D V +  
Sbjct: 480 HEMW--KIGLQPN------IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+  + K G  D A EI+K M  +G+      +  L+  +   G   D +  L+ M+  G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            +P ++ F S+++       ++ A+ + K M  +GV  +      +++      +++EA 
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651

Query: 540 GRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLD 575
                M   G   SV  +  L+    ++ K + A ++ D
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/474 (23%), Positives = 218/474 (45%), Gaps = 12/474 (2%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +  + P+ GV W+   + ++I    + G ++E+  +  +M+  G    V SY  +     
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G      +    M  +G++P  + Y  ++       KL  A   F +M  +GI  D V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            Y T+I+G+ +   +  A K F EM  ++I P V++YT +I G+  +    +A ++F EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               ++P++VT+T L+ G C AG M +  +V   M++    P +   +  L+   CK G 
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGD 471

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           L++A ++L  M ++ +      Y  ++   CK+   + A+KL+ +           + L+
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF--------EAAGLN 523

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFE 435
            +  +Y  ++   C +G+  KA+   ++++ KG L P  V FN L+ G    G  +   +
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEK 582

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           ++  M  +G+  +A  +  L++ Y  +     A      M   G  P    + ++++   
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           +   ++ A  + + M  KG   ++   + +++  L R    EA    D M + G
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 240/549 (43%), Gaps = 23/549 (4%)

Query: 95  EVLIESYGKK---GIVQESVKIFDIM----KQLGVERSVKSYDALFKLILRRGRYMMAKR 147
           + LI S+ ++    +    V+ FD++    K  G +  V  +D  F++++  G    A+R
Sbjct: 139 QSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRV--FDVFFQVLVDFGLLREARR 196

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFL-SLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
            F KML+ G+  +  + NV L        K  TAI  F +    G+  +V +YN +I+  
Sbjct: 197 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFV 256

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +  ++ EA  L   M+ K   P VISY+T++ GY      D   ++ + MK   +KPN+
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
             Y +++  LC   K+ E ++   EM+ + I P D  V+  L+   CK G + AA+    
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFY 375

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M    I  +   Y  +I  FC+      A KL  ++  K   L P S       ++  +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG--LEPDSV------TFTEL 427

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I   C  G    A      +++ G   + V +  LI G  KEG+ DSA E++  M + G+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             +   Y  ++    + G   +A   +      G +  +  + ++M++  + G +  A  
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           ++K M+ KG++  +     ++    + G +E+    ++ M+  G  PN   F+SL+    
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
            +    AA  +      R    D  +YE ++     A     A+ +  ++  KG      
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667

Query: 623 SSDKLIAGL 631
           +   LI G 
Sbjct: 668 TYSVLIKGF 676



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 154/309 (49%), Gaps = 1/309 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I    ++G +  A  +  +M  KG++ D   F  LI  Y K G ++++ ++ 
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M Q G   +V +Y  L   + + G    A    ++M   G++P   TYN ++ G   S
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A++   + ++ G++ D VTY T+++ Y +  +MD+A+++  EM  K ++PT++++
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G+      +D  ++ + M +  + PNA T+ +L+   C    +     + ++M  
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R + P D   +  L+   CK+ ++  A  + + M           Y +LI+ F K + + 
Sbjct: 625 RGVGP-DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683

Query: 355 RAIKLLDKL 363
            A ++ D++
Sbjct: 684 EAREVFDQM 692



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 7/222 (3%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W   LQ  I      F +N + N L  + N E A++     E AGL N D  T+  +++ 
Sbjct: 483 WKIGLQPNI------FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL-NADTVTYTTLMDA 535

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
             + G+++ A+ IL +M  KG+Q     F VL+  +   G++++  K+ + M   G+  +
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             ++++L K    R     A   +  M S G+ P   TY  ++ G   +  ++ A   F+
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           +MK +G S+ V TY+ +I G+ + KK  EA ++F +M+ + +
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/555 (24%), Positives = 262/555 (47%), Gaps = 20/555 (3%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWV---ERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           F +N++   L     S+ AL     +   +  G    D  ++  +I  L R G+L+ A C
Sbjct: 168 FSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYC 227

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +  +M  +G+  +   +  L+  Y   G  +E++ IF  M + GVE  V +Y+ L   + 
Sbjct: 228 LFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLC 287

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR M A++ F+ M+ +G +P    Y  +L G+     L    +  + M   G   D  
Sbjct: 288 KNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHY 347

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +N +I  Y +   +DEA   F++M+++ + P +++Y T++     V + DDA+  FD +
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSG 316
            S  + PN V +  L+ GLC   K  + +++  EM+ R I P  N++F   LL   CK G
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP--NTIFFNTLLNHLCKEG 465

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            +  A ++   M+R+ +  +   Y  LI+ +C     D A KLL+ +V   +  +P    
Sbjct: 466 MVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGV--KPNEV- 522

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAF 434
                +YN +I   C NG+   A   FRQ+  KGV +P  V ++ ++ G  +     +A 
Sbjct: 523 -----TYNTIINGYCKNGRIEDACSLFRQMASKGV-NPGIVIYSTILHGLFQTRRIAAAK 576

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           E+   M + G+      Y  +++   +     DA     ++        +  F  ++++L
Sbjct: 577 ELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDAL 636

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            + GR   A  +  S++ +G+  N+     ++++L+ +G +EE       + ++G   + 
Sbjct: 637 LKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADS 696

Query: 554 --FDSLLSVLSEKGK 566
              ++L+  L +KG+
Sbjct: 697 RMLNALVGKLPQKGE 711



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/461 (22%), Positives = 198/461 (42%), Gaps = 16/461 (3%)

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI- 253
           D+ TY+ +I   +R   +D A      +         I+++ ++KG    +R  DA+ I 
Sbjct: 95  DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV---ERYIPPKDNSVFMKLLG 310
              M +    PNA +Y  LL GLCD  +  +   +L  M+    R   P D   +  ++ 
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
              + G L+ A  +   M+   +      Y  L+  +C +     AI +  K+    +  
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV-- 272

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGN 429
                 + +  +YN ++ +LC NG++ +A   F  ++KKG   D   +  L+ G++ EG 
Sbjct: 273 ------EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGY 326

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
                +++ +M R G   D   +  LI +Y + G   +A  A   M + G  P    + +
Sbjct: 327 LVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGT 386

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           VM++L   G+V  A      ++ +G+  N  +   ++  L      ++A      M+  G
Sbjct: 387 VMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRG 446

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
             PN   F++LL+ L ++G    A  + D  +  D   D+ +Y  ++D     GK   A 
Sbjct: 447 ICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEAT 506

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            +L  ++  G   +  + + +I G  + G  + A  L R +
Sbjct: 507 KLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQM 547


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 256/553 (46%), Gaps = 37/553 (6%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           A+TT +    +A  PQ  H L+            AL+ FR          D   +  +I 
Sbjct: 44  AFTTLIHGFCKAGQPQVGHKLL----------NQALKRFR---------PDVFLYTSVIH 84

Query: 65  ILGRVGKLN--HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
              + G L+  + R +    PK     D   +  +I+       + E+ ++F+ +K  G 
Sbjct: 85  GYCKAGDLDTGYFRAV---TPK--ASLDVISYTTVIKGLADSKRIDEACELFEELKTAGC 139

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             +V +Y A+   +L+ GR     + F +M      PTR TY V++ G   +  L  A +
Sbjct: 140 SPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACK 199

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            FE M  +G   D +TY T+I+G+++  KMDEA KL   M  K  EPT ++Y +++ G+ 
Sbjct: 200 VFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 259

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
            ++  ++A  +  +M+    +P    +T+LL      G+  E  +VL EM  R   P D 
Sbjct: 260 KLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP-DV 318

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
            ++  L+ +   +G +  A  V  +MI      +A  YG +I+NF K    + A ++L+ 
Sbjct: 319 ILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE- 377

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLI 421
                  L  +S +  +  +YN ++       +  +A   + +++  G+  + V FN L+
Sbjct: 378 -------LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430

Query: 422 RGHSKEGNPDSAFEIVK-IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
            G  K+G  D AF + K ++ +  VP    +Y  LI+   + G  ++A      MI+ G 
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    + S++ SL + GR+  A ++++ MV+ GV  ++   + ++  L+    V+ A  
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 550

Query: 541 RIDLMMQSGSVPN 553
               MM+ G  PN
Sbjct: 551 VFQEMMKRGCAPN 563



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 250/542 (46%), Gaps = 41/542 (7%)

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           E+ K F+ M   G E  V ++  L     + G+  +  +  N+ L     P    Y  ++
Sbjct: 25  EAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR-FRPDVFLYTSVI 83

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G+  +  L+T   +F  +  +  SLDV++Y T+I G    K++DEA +LF E+K     
Sbjct: 84  HGYCKAGDLDTG--YFRAVTPKA-SLDVISYTTVIKGLADSKRIDEACELFEELKTAGCS 140

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P V++YT +I G +   R +D L+ F+EM      P   TYT ++ GLC A  + +  KV
Sbjct: 141 PNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV 200

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             +MV++   P D   +  L+    K+  ++ A  +L  M+       A  YG ++  FC
Sbjct: 201 FEQMVQKGCVP-DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 259

Query: 349 KAEMYDRAIKLLDKLVEKEIILRP----------------------QSTLDMEASS---- 382
           K +M + A +++ ++ E+     P                      Q   +M A      
Sbjct: 260 KLDMINEAKEVIAQMRERG--CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 317

Query: 383 ---YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
              Y  +I  L   G+  +A   F  +++KG   D + +  +I+  SK GN ++A EI++
Sbjct: 318 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 377

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
           +M + GV  D  AY  L++ Y++      A    D M+  G  P +  F  +M  LF+DG
Sbjct: 378 LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 437

Query: 499 RVQTASRVMKSMVEK-GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NF 554
           +   A  + K M+EK  V   L     +++ L   G V EA  +   M+  G +P    +
Sbjct: 438 KTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTY 497

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            SL+  L++ G+   A KL++  +      D+ +Y  ++  L+ +     A+ +  ++M+
Sbjct: 498 TSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMK 557

Query: 615 KG 616
           +G
Sbjct: 558 RG 559



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 250/527 (47%), Gaps = 20/527 (3%)

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           +G E ++ SY+ +   +    +   A ++FN M+  G EP    +  ++ GF  + + + 
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
             +       R    DV  Y ++I+GY +   +D     F  +  K     VISYTT+IK
Sbjct: 61  GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG--YFRAVTPKA-SLDVISYTTVIK 116

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G    +R D+A  +F+E+K+    PN V YTA++ GL  AG++ +  K   EM      P
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
              +  + + G+ CK+  L  A  V + M++     +   Y  LI+ F KA   D A KL
Sbjct: 177 TRTTYTVVIDGL-CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAF 417
           LD ++ K     P+ T    A +Y  ++   C      +A+    Q+ ++G  +P    F
Sbjct: 236 LDVMLTK----GPEPT----AVTYGSIVHGFCKLDMINEAKEVIAQMRERGC-EPGLFIF 286

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
            +L+  +  +G  + A++++  M  RG   D   Y  LI+     G   +A+   DSMIE
Sbjct: 287 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 346

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G +P +  + +++++  + G V+ A  +++ M + GV  +      +++  +    V++
Sbjct: 347 KGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 406

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI-IDLASYEKVL 593
           A G  D M+ SG  PN   F+ L+  L + GKT  A  L    L ++ +   L SY  ++
Sbjct: 407 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILI 466

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D L  AG+   A+    +++++G + +  +   LI  L + G   +A
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 513



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 193/408 (47%), Gaps = 12/408 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + +V + L  A+    A + F  + + G    D  T+  +I+   +  K++ AR +L  M
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVP-DTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG +     +  ++  + K  ++ E+ ++   M++ G E  +  + +L    L +GR 
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +   +M + G  P    Y  ++   F + ++  A   F+ M  +G + D +TY T+
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  +++   ++ A ++   M +  + P   +Y +++ GYV +ER D A  ++D M +  +
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAA 321
           KPNAVT+  L+ GL   GK      + +EM+E+  +PP   S  + + G+  K+G ++ A
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLG-KAGRVSEA 478

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
               + MI   I  E   Y  LI +  KA     A KL++ +V+  +        + +  
Sbjct: 479 FLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGV--------NPDVQ 530

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
           +Y+ +I  L  +     A   F+++MK+G   + V +  L RG    G
Sbjct: 531 AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 242/510 (47%), Gaps = 10/510 (1%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L +V +      ++ +M + G    E     L++   KKG +  +  + 
Sbjct: 284 DVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLV 343

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + +K+ GV  S+  Y+AL   + + G+   A+  FN M  +G+ P   TY++++  F   
Sbjct: 344 NKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKR 403

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL+ A+ F   M   GI   V  Y+++I+G+ +  K+  A+ LF EM    ++P V+ Y
Sbjct: 404 GKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIY 463

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           T++I GY       +A R++ EM    + PN  T+TAL+ GLC A +M E  K+  EMVE
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P +   +  L+   CK G+   A ++L  M+   +  +   Y  LI   C      
Sbjct: 524 WNVIPNE-VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A + ++ L  ++  L           +Y  +I  LC  G   KAE+  R+++    L +
Sbjct: 583 EAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 642

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              +   +   + EGN + A ++  ++   G   +   Y  LI  + + G   +A   L 
Sbjct: 643 QNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLV 701

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK--ILEALLM 531
           +MI+ G SP    + +++      G ++ A ++ +SM+ +GV  N D VA   ++    +
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV--NPDTVAYNFLIYGCCV 759

Query: 532 RGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            G + +A    D MM+ G  PN   ++SL+
Sbjct: 760 TGELTKAFELRDDMMRRGVKPNRATYNSLI 789



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 237/524 (45%), Gaps = 22/524 (4%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           +  KG++ D   +  L+    K    +   ++ + M + G   S  +   L   + ++G 
Sbjct: 276 LSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGN 335

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A    NK+   G+ P+   YN ++       KL+ A   F +M  +G+  + VTY+ 
Sbjct: 336 IGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSI 395

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+ + +  K+D A     +M E  I+ TV  Y+++I G+  + +   A  +FDEM +  
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           +KPN V YT+L+ G C  G++    ++  EM  + I P +   F  L+   C +  +  A
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISP-NTYTFTALISGLCHANRMAEA 514

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   M+  ++      Y +LIE  CK     RA +LLD++VEK ++  P      +  
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV--P------DTY 566

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMK--------KGVL-DPVAFNNLIRGHSKEGNPDS 432
           +Y P+I  LC  G+  +A  F   L          +G L + V +  LI G  K G  D 
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDK 626

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  + + M       + + Y C ++    +G    A    D ++E G    +  +  ++ 
Sbjct: 627 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIR 685

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
              + GR+Q A+ V+ +M++ G+  +    + I+     RG ++EA+   + M+  G  P
Sbjct: 686 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 745

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           +   ++ L+      G+   A +L D  + R    + A+Y  ++
Sbjct: 746 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 789



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 142/653 (21%), Positives = 276/653 (42%), Gaps = 44/653 (6%)

Query: 2   AERAWTTRLQNKI--RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
             ++W   L N    + L P   H++   ++    +S  AL+FF ++     F+H   + 
Sbjct: 40  GNQSWRVALNNSFISQTLKP---HHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSF 96

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             +I  L +      A  +L  +  +G+   E +FE  ++SY K      +   FD++ Q
Sbjct: 97  CILIHALVQSNLYWPASSLLQTLLLRGLN-PEGLFESFLDSYRKCNF--STTLGFDLLIQ 153

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
             V+   +  D L  + L              M+  GI P   T + +L G     +   
Sbjct: 154 TYVQNR-RELDGLVVVRL--------------MMDCGILPQIRTLSGVLNGLIRIRQFRM 198

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+  F+++ S G+  DV  Y  ++      K    A ++   M+    + +V +Y   I+
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G    +R  +A+ I + +    ++ +  TY  L+ GLC   +    ++++ EM+E    P
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            + +V   + G++ K G++ +A D++  + +  +      Y  LI + CK    D A  L
Sbjct: 319 SEAAVSNLVDGLR-KKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFN 418
            + +  K +   P         +Y+ +I   C  G+   A  F  ++ + G+   V  ++
Sbjct: 378 FNNMGHKGLF--PNDV------TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYS 429

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           +LI GH K G   +A  +   M   G+  +   Y  LI  Y ++GE  +A      M   
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G SP +  F +++  L    R+  A+++   MVE  V  N      ++E     G+   A
Sbjct: 490 GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD--------CIIDLA 587
              +D M++ G VP+   +  L+S L   G+   A + ++   G          C+ ++ 
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVV 609

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +Y  +++ L   G    A  +  +++    + +  +    +  L  EGN ++A
Sbjct: 610 TYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 662



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 201/443 (45%), Gaps = 17/443 (3%)

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M +  I P + + + ++ G + + +   AL +FDE+ S  ++P+   YTA++  LC+   
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 282 MVEVQKVLREMVERY--IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
            +  ++V+  M      +     +VF++ L   CK+  +  A ++   +    +  + G 
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGL---CKNQRVWEAVEIKNLLSYKGLRADVGT 287

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  L+   CK E ++   +++++++E   +  P      EA+  N ++  L   G  G A
Sbjct: 288 YCTLVLGLCKVEEFEAGEEMMNEMIEFGFV--PS-----EAAVSN-LVDGLRKKGNIGSA 339

Query: 400 EIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                ++ K GV   +  +N LI    K+G  D A  +   MG +G+  +   Y  LI+S
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           + ++G+   A   L  M E G       + S++    + G+++ A  +   M+  G+K N
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           + +   ++      G +  A      M   G  PN   F +L+S L    +   A KL  
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFG 519

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             +  + I +  +Y  +++     G T+ A+ +L +++EKG V D  +   LI+GL   G
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTG 579

Query: 636 NTKQADILSRMIRGEMSRGSQKE 658
              +A      ++GE  + ++ E
Sbjct: 580 RVSEAREFMNDLQGEQQKLNEIE 602



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 14/265 (5%)

Query: 25  LVYNVL---HGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YNVL   H  + N+  A +    +   GL   D  T+  +I  L   G+++ AR  + 
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV-PDTYTYRPLISGLCSTGRVSEAREFMN 589

Query: 81  DMPKKGVQWDED--------MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           D+  +  + +E          +  LI    K G++ ++  +   M       +  +Y   
Sbjct: 590 DLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACF 649

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              +   G    A +  + +L EG      TYN+++ GF    +++ A     +M   GI
Sbjct: 650 LDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 708

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
           S D ++Y+T+I  Y R   + EA KL+  M  + + P  ++Y  +I G         A  
Sbjct: 709 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE 768

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLC 277
           + D+M    VKPN  TY +L+ G C
Sbjct: 769 LRDDMMRRGVKPNRATYNSLIHGTC 793



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I    ++G++  A  +L++M   G+  D   +  +I  Y ++G ++E++K+++ M
Sbjct: 679 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              GV     +Y+ L       G    A    + M+  G++P R TYN ++ G  L   +
Sbjct: 739 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 798

Query: 178 ETAIRFF 184
            +   +F
Sbjct: 799 SSTADYF 805


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 232/451 (51%), Gaps = 10/451 (2%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L ++G++  A  +LL M  +G   D   +  +I  Y + G +Q  +K+ + M+  G++ +
Sbjct: 263 LCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPN 322

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y+ +  L+ + G+   A+R   +M+SEGI P    Y  ++ GF     + +A R F+
Sbjct: 323 PYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFD 382

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+ R IS D +TY  +I G  +  ++ EA+KLF EM  K +EP  ++YT +I GY    
Sbjct: 383 EMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEG 442

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           +  +A  + ++M    + PN VTYTAL  GLC  G++    ++L EM  + +   +   +
Sbjct: 443 KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL-ELNIYTY 501

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             L+   CK+G+++ A  ++K M       +A  Y  L++ +CK+    RA +LL ++++
Sbjct: 502 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 561

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
           +E  L+P         ++N ++   C +G     E   + +++KG++ +   +N+LI+ +
Sbjct: 562 RE--LQPT------VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
               N  +  EI + M  +GV  D + Y  LI+ + +     +A      M+  G +   
Sbjct: 614 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTV 673

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           S + ++++  ++  +   A  + + M  +G+
Sbjct: 674 SSYNALIKGFYKRKKFLEARELFEQMRREGL 704



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/503 (24%), Positives = 231/503 (45%), Gaps = 15/503 (2%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           + ++ P+ GV W+   + ++  S  + G V E+ ++   M+  G    V SY  +     
Sbjct: 240 VFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYC 299

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G      +   +M  +G++P  +TYN ++     + K+  A R   +M S GI+ D V
Sbjct: 300 QVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV 359

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            Y T+I+G+ +   +  A +LF EM+++ I P  I+YT +I G     R  +A ++F EM
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 419

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               ++P+ VTYTAL+ G C  GKM E   +  +M++  + P +   +  L    CK G 
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP-NIVTYTALADGLCKCGE 478

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           ++ A ++L  M R  +      Y  L+   CKA   D+A+KL+  +   E+     +   
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM---EV-----AGFH 530

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFE 435
            +A +Y  ++   C + +  +A    RQ++ +  L P  V FN L+ G    G  +   +
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE-LQPTVVTFNVLMNGFCMSGMLEDGEK 589

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           ++K M  +G+  +A  Y  LI+ Y  +            M   G  P  + +  +++   
Sbjct: 590 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 649

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           +   ++ A  + + MV KG    +     +++    R    EA    + M + G V +  
Sbjct: 650 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 709

Query: 554 -FDSLLSVLSEKGKTIAAVKLLD 575
            ++    +  ++GK    ++L D
Sbjct: 710 IYNIFADINYDEGKMELTLELCD 732



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 214/445 (48%), Gaps = 12/445 (2%)

Query: 10  LQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           LQ ++R  +P    ++ V N        +  L+    ++  GL   +  T+  +I +L +
Sbjct: 277 LQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGL-KPNPYTYNGVILLLCK 335

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
            GK+  A  +L +M  +G+  D  ++  LI+ + K G V  + ++FD M++  +     +
Sbjct: 336 TGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFIT 395

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y A+   + + GR M A + F++M+ + +EP   TY  ++ G+    K++ A      M 
Sbjct: 396 YTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML 455

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             G++ ++VTY  + +G  +  ++D A +L  EM  K +E  + +Y +++ G       D
Sbjct: 456 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 515

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A+++  +M+     P+AVTYT L+   C + +MV   ++LR+M++R + P   + F  L
Sbjct: 516 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT-FNVL 574

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   C SG L     +LK M+   I   A  Y  LI+ +C         ++   +  K +
Sbjct: 575 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 634

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           +  P      + ++YN +I+  C      +A    R ++ KG  L   ++N LI+G  K 
Sbjct: 635 V--P------DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 686

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAY 452
                A E+ + M R G+  D + Y
Sbjct: 687 KKFLEARELFEQMRREGLVADREIY 711



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/575 (22%), Positives = 242/575 (42%), Gaps = 88/575 (15%)

Query: 89  WDED--MFEVLIESYGKKGIVQESVKIFDIM----------------------------- 117
           W  D  +F++  +   + G++ E+ K+FD M                             
Sbjct: 178 WGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIA 237

Query: 118 -------KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
                   ++GV  +  SY+ +   + + GR + A +   +M   G  P   +Y+ ++ G
Sbjct: 238 LKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVING 297

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           +    +L+  ++  E+M+ +G+  +  TYN +I    +  K+ EAE++  EM  + I P 
Sbjct: 298 YCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPD 357

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
            + YTT+I G+  +     A R+FDEM+   + P+ +TYTA++ GLC  G+++E  K+  
Sbjct: 358 GVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFH 417

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           EMV + + P D   +  L+   CK G +  A  +   M+++ +      Y  L +  CK 
Sbjct: 418 EMVCKRLEP-DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 476

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
              D A +LL ++  K         L++   +YN ++  LC                   
Sbjct: 477 GEVDTANELLHEMCRK--------GLELNIYTYNSLVNGLC------------------- 509

Query: 411 VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
                          K GN D A +++K M   G   DA  Y  L+++Y +  E   A  
Sbjct: 510 ---------------KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 554

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L  M++    P    F  +M      G ++   +++K M+EKG+  N      +++   
Sbjct: 555 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 614

Query: 531 MRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI-----ID 585
           +R ++         M   G VP+ ++   ++  KG   A      + L RD +     + 
Sbjct: 615 IRNNMRATTEIYRGMCAKGVVPDGNTYNILI--KGHCKARNMKEAWFLHRDMVGKGFNLT 672

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           ++SY  ++       K L A  +  ++  +G V D
Sbjct: 673 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVAD 707



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 151/346 (43%), Gaps = 15/346 (4%)

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D  VF     V  ++G L+ A  +   M+         +YG+LI             + L
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKML---------NYGLLISVDSCNLFISHLSEDL 231

Query: 361 D--KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
           D  K+  K  +  P+  +    +SYN +   LC  G+  +A     Q+  +G + D +++
Sbjct: 232 DGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISY 291

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           + +I G+ + G      ++++ M  +G+  +   Y  +I    + G+ A+A+  L  MI 
Sbjct: 292 STVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMIS 351

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           +G +P   ++ ++++   + G V +A R+   M ++ +  +      ++  L   G V E
Sbjct: 352 EGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVME 411

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A      M+     P+   + +L+    ++GK   A  L +  L      ++ +Y  + D
Sbjct: 412 ADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALAD 471

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            L   G+   A  +L ++  KG   +  + + L+ GL + GN  QA
Sbjct: 472 GLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 517



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 12/239 (5%)

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA-KTA 471
           DP  F+   +   + G  D A ++   M   G+    D+    I S+L   E  D  K A
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFI-SHL--SEDLDGIKIA 237

Query: 472 LDSMIE---DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           L   +E    G    ++ +  +  SL + GRV  A +++  M  +G   ++   + ++  
Sbjct: 238 LKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVING 297

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
               G ++  L  I+ M   G  PN   ++ ++ +L + GK   A ++L   +      D
Sbjct: 298 YCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPD 357

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGLNQEGNTKQADIL 643
              Y  ++D     G   +AY  LF  M+K  ++ D+ +   +I GL Q G   +AD L
Sbjct: 358 GVIYTTLIDGFCKLGNVSSAYR-LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 145/605 (23%), Positives = 273/605 (45%), Gaps = 22/605 (3%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
           VL   K+   AL+ F  V+R   F H   T+  +I+ LG  G       +L +     + 
Sbjct: 13  VLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETR---MD 69

Query: 89  WDEDMFEVL----IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            D  + E +    ++SYG+KG VQE+V +F+ M     E SV SY+A+  +++  G +  
Sbjct: 70  IDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQ 129

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A + F +M + GI P  +T+ + +  F  + +  +A+R   +M S+G  L+ V Y T++ 
Sbjct: 130 AHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVA 189

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G+       EA +LF +M    I P V ++  ++          ++ R+ +++    +  
Sbjct: 190 GFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCS 249

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N  T+   + GLC  G +     +L  ++   + P D   +  L+   CK+ ++  A   
Sbjct: 250 NLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTP-DVVTYNTLICGLCKNSNVVEAEKY 308

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L  ++   +  +   Y  LI+ +CK  M   A K+L   + K  +  P      +  +Y 
Sbjct: 309 LHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFV--P------DEFTYC 360

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
            +I  LC N +  +A   F   + KG L P  + +N LI+G  +EG    A +++  M  
Sbjct: 361 SLINGLCQNDEIDRALALFNAALGKG-LKPTVILYNMLIKGLCQEGLILQALQMMNEMSE 419

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G   D   Y  +I    + G  +DA   ++  I  G+ P    F ++++   +  +++T
Sbjct: 420 NGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMET 479

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
             +++  M   GV  ++     +L  L      E+ +   + M++ G VPN   ++ L  
Sbjct: 480 TIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTE 539

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            L + GK   A+ L+D  L +    D  S+  ++      G    AY +  ++ E+  V+
Sbjct: 540 SLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVS 599

Query: 620 DWKSS 624
              ++
Sbjct: 600 HTTAT 604



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 263/563 (46%), Gaps = 20/563 (3%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A + F  + R G+F  D  T  K++  L + G++  +  +L  + KKG+  +   F + I
Sbjct: 200 AYELFNDMLRIGIF-PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFI 258

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +   +KG++  ++ + D + + G+   V +Y+ L   + +    + A++Y +K+++ G+E
Sbjct: 259 QGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE 318

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TYN ++ G+     L+ A +  +    +G   D  TY ++ING  +  ++D A  L
Sbjct: 319 PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALAL 378

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F     K ++PTVI Y  +IKG         AL++ +EM       +  TY  ++ GLC 
Sbjct: 379 FNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCK 438

Query: 279 AGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
            G + +   ++ + + + Y+P  D   F  L+   CK   +     +L  M    +  + 
Sbjct: 439 MGCVSDANNLMNDAIAKGYVP--DVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDV 496

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y  ++    KA   +  ++  + +VEK  +  P         +YN + + LC  G+  
Sbjct: 497 ITYNSVLNGLSKAVKNEDLMETFETMVEKGCV--PNKI------TYNILTESLCKAGKVN 548

Query: 398 KAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR-GVPRDADAYICL 455
           +A     +++ KG+  D V+F  +I G +  G+   A+++ + MG +  V      Y  +
Sbjct: 549 EALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIM 608

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I ++  K +    +     M   G +P +  +R +++     G   +  + +  M+EKG 
Sbjct: 609 INAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGF 668

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK--L 573
             +L    +++  L ++  V EA+  I  M+ +G VP    +++ +SE  K + A    +
Sbjct: 669 IPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP---EVVNSISEADKKVVAAPKIV 725

Query: 574 LDFCLGRDCIIDLASYEKVLDAL 596
           ++  L R CI   A YE + D +
Sbjct: 726 VEDLLKRSCITYYA-YELLYDGI 747



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 221/509 (43%), Gaps = 48/509 (9%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           K++ A+  FE M        V++YN ++N         +A K+F  MK   I P V ++T
Sbjct: 91  KVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFT 150

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
             IK +   +R   ALR+ + M S   + NAV Y  ++ G  +    VE  ++  +M+  
Sbjct: 151 IRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRI 210

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            I P D S F KLL   CK G +  +  +L  +++  + +    + I I+  C+  M   
Sbjct: 211 GIFP-DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSG 269

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A+ +LD ++ +   L P      +  +YN +I  LC N    +AE +  +L+  G+  D 
Sbjct: 270 AMSMLDSVIREG--LTP------DVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDG 321

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             +N LI G+ K G   +A +I++    +G   D   Y  LI    +  E   A    ++
Sbjct: 322 FTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNA 381

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
            +  G  P   L+  +++ L ++G +  A ++M  M E G   ++     ++  L   G 
Sbjct: 382 ALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGC 441

Query: 535 VEEALGRIDLMMQSGSVPN--------------------------------------FDS 556
           V +A   ++  +  G VP+                                      ++S
Sbjct: 442 VSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNS 501

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           +L+ LS+  K    ++  +  + + C+ +  +Y  + ++L  AGK   A  ++ +I+ KG
Sbjct: 502 VLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKG 561

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQADILSR 645
              D  S   +I+G    G+ K A  L R
Sbjct: 562 ITPDTVSFATIISGFANNGDLKGAYQLFR 590


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 235/505 (46%), Gaps = 13/505 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F   + S  KK      V + + M   GV  +V S + L   + R    + A     KM 
Sbjct: 95  FGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMF 154

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             GI+P   T+N ++ G  +  +++ A+  F +M  RG   DV++Y+T+ING  +     
Sbjct: 155 KLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTS 214

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A +L  +M+EK  +P +++YTT+I         +DA+ +  EM    + P+ VTY+ +L
Sbjct: 215 MALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTIL 274

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  G + E   +  EMV R + P +   F  L+   CK G ++ A  V +AM +   
Sbjct: 275 HGFCSLGHLNEATILFNEMVGRNVMP-NTVTFTILVDGLCKEGMVSEARCVFEAMTKKGA 333

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
              A  Y  L++ +C     D A K+LD +V+K     P         SYN +I   C  
Sbjct: 334 EPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC--APV------VHSYNILINGYCKR 385

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A+    ++ +K +  D V ++ L++G  + G P  A  + K M   G+  D   Y
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L++   + G   +A   L SM E    P   L+  ++E +F  G+++ A  +   +  
Sbjct: 446 STLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFA 505

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G++  +     +++ LL  G  +EA      M   G +PN   ++ ++    +   +  
Sbjct: 506 DGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSST 565

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLD 594
           A++L+D  +G+    D ++++ +LD
Sbjct: 566 AIRLIDEMVGKRFSADSSTFQMLLD 590



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 215/486 (44%), Gaps = 45/486 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R+  +  A  +L  M K G+Q D   F  LI     +G ++E+V +F+ M + G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            +  V SY  +   + + G   MA +   KM  +G +P    Y  ++        +  A+
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M  RGI  DVVTY+T+++G+     ++EA  LF EM  +N+ P  +++T ++ G 
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                  +A  +F+ M     +PNA TY AL+ G C   +M E QKVL  MV++   P  
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +S                                    Y ILI  +CK    D A  LL 
Sbjct: 373 HS------------------------------------YNILINGYCKRRRLDEAKSLLV 396

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           ++ EKE  L P +       +Y+ ++Q LC  G+  +A   F+++   G+L D + ++ L
Sbjct: 397 EMSEKE--LTPDTV------TYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTL 448

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G  K G+ D A +++K M    +  D   Y  LIE     G+   AK     +  DG 
Sbjct: 449 LDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGI 508

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    +  +++ L ++G    A  + + M + G   N      I++  L       A+ 
Sbjct: 509 QPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIR 568

Query: 541 RIDLMM 546
            ID M+
Sbjct: 569 LIDEMV 574



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 226/497 (45%), Gaps = 15/497 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F +ML     P+   +   L       +  T +     M   G++ +V + N +IN   R
Sbjct: 80  FYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCR 139

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
              +  A  +  +M +  I+P  I++ T+I G        +A+ +F+EM     +P+ ++
Sbjct: 140 LNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVIS 199

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y+ ++ GLC +G      ++LR+M E+   P +   +  ++   CK   +N A D+L  M
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKMEEKGCKP-NLVAYTTIIDSLCKDTLVNDAMDLLSEM 258

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +   IP +   Y  ++  FC     + A  L +++V + ++  P +       ++  ++ 
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVM--PNTV------TFTILVD 310

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
            LC  G   +A   F  + KKG  +P A  +N L+ G+      D A +++ IM  +G  
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGA-EPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCA 369

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
               +Y  LI  Y ++    +AK+ L  M E   +P +  + ++M+ L + GR Q A  +
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNL 429

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
            K M   G+  +L   + +L+ L   GH++EAL  +  M +S   P+   ++ L+  +  
Sbjct: 430 FKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFI 489

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            GK   A +L            + +Y  ++  LL  G +  AY +  K+ + G + +  S
Sbjct: 490 AGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCS 549

Query: 624 SDKLIAGLNQEGNTKQA 640
            + +I G  Q  ++  A
Sbjct: 550 YNVIIQGFLQNQDSSTA 566



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 186/377 (49%), Gaps = 10/377 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           ++ V N L  + N+  ALQ  R +E  G    +   +  +I+ L +   +N A  +L +M
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKMEEKGC-KPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  D   +  ++  +   G + E+  +F+ M    V  +  ++  L   + + G  
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMV 318

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F  M  +G EP  +TYN ++ G+ L+ +++ A +  + M  +G +  V +YN +
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNIL 378

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           INGY + +++DEA+ L  EM EK + P  ++Y+T+++G   V R  +AL +F EM S  +
Sbjct: 379 INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+ +TY+ LL GLC  G + E  K+L+ M E  I P D  ++  L+     +G L  A 
Sbjct: 439 LPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEP-DIVLYNILIEGMFIAGKLEVAK 497

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++   +    I      Y I+I+   K  + D A +L  K+ +   +  P S       S
Sbjct: 498 ELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFL--PNS------CS 549

Query: 383 YNPMIQHLCHNGQTGKA 399
           YN +IQ    N  +  A
Sbjct: 550 YNVIIQGFLQNQDSSTA 566



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 210/476 (44%), Gaps = 13/476 (2%)

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           S+ ++ A+  F  M        VV +   +    + K+      L  +M    +   V S
Sbjct: 70  SISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYS 129

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
              +I     +     A+ +  +M    ++P+A+T+  L+ G C  G++ E   +  EMV
Sbjct: 130 LNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMV 189

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
            R   P D   +  ++   CKSG+ + A  +L+ M           Y  +I++ CK  + 
Sbjct: 190 RRGHQP-DVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV 248

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           + A+ LL ++V++ I   P   +     +Y+ ++   C  G   +A I F +++ + V+ 
Sbjct: 249 NDAMDLLSEMVDRGI---PPDVV-----TYSTILHGFCSLGHLNEATILFNEMVGRNVMP 300

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           + V F  L+ G  KEG    A  + + M ++G   +A  Y  L++ Y    +  +A+  L
Sbjct: 301 NTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL 360

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D M++ G +P    +  ++    +  R+  A  ++  M EK +  +    + +++ L   
Sbjct: 361 DIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQV 420

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G  +EAL     M  SG +P+   + +LL  L + G    A+KLL          D+  Y
Sbjct: 421 GRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLY 480

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
             +++ +  AGK   A  +  K+   G     ++   +I GL +EG + +A  L R
Sbjct: 481 NILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFR 536


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 162/655 (24%), Positives = 276/655 (42%), Gaps = 65/655 (9%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
            T+  +I      G L  A+  L  + + G+  D   +   +  Y + G+   + ++F +
Sbjct: 75  HTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLL 134

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M Q G  R+  +Y AL + +   G    A   F  M  +G  P  H Y++M+ G   + +
Sbjct: 135 MPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGR 194

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A+    D   +G   +V  YN +I+GY     ++ A  +F  M+ K   P V +YT 
Sbjct: 195 AGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQ 254

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G+    + + A+ ++  M    + PN VTYT L+ G C  G +    ++L  M    
Sbjct: 255 LICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACG 314

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P + +  + L+   CK G +  A   L ++++  I      Y  +I+  CK+  +D A
Sbjct: 315 LAPNEWTCLV-LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGA 373

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
             L+ K++ +  +         +A  Y+ +I  LC   +  +A      +++ GV  + V
Sbjct: 374 HNLMQKIITEGFV--------PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAV 425

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            F  LI  H +E   DS   I   M   GV  D   Y   I SY + G   DA++ +  M
Sbjct: 426 PFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQM 485

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN----------------- 518
           I+ G  P  + + ++++     G V  A   +K+M++ G K N                 
Sbjct: 486 IDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSY 545

Query: 519 LDLVA-----------KILEALL---MRGHVEEA----------LGRIDLM--------- 545
            DLVA           K+LE LL   ++     A          L ++D +         
Sbjct: 546 HDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVG 605

Query: 546 MQSGSVPNFDSLLSVLSEKGKTIA----AVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           MQS ++   + + + + E    +     A++ LD  + R+ +  L SY  ++ AL   G 
Sbjct: 606 MQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGS 665

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGEMSRGS 655
              A SI   I+ K    D  +   LI GL Q+GNT     +LS M       GS
Sbjct: 666 FHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGS 720



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 150/616 (24%), Positives = 271/616 (43%), Gaps = 52/616 (8%)

Query: 48  RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV 107
           RAGL   D   +   +    R G   HA  + L MP++G       +  L++     G+V
Sbjct: 102 RAGL-APDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMV 160

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
           +E++ +F  M   G       Y  +   +   GR   A       + +G  P    YN +
Sbjct: 161 REAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNAL 220

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           + G+  +  LE AI  F+ M+S+G   +V TY  +I G+ +  K++ A  L++ M E  +
Sbjct: 221 IDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGL 280

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P V++YTT+I+G  +    + A R+   M++  + PN  T   L+  LC  G++ E Q+
Sbjct: 281 APNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQ 340

Query: 288 VLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            L  +V++ I  K N V +  ++   CKSG  + A ++++ +I      +A  Y  LI+ 
Sbjct: 341 FLGSLVQKGI--KVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDG 398

Query: 347 FCKAEMYDRAIKLLDKLVEKEI--------IL-----------RPQSTLDMEAS------ 381
            C+      AI LL+ ++E  +        IL            P+   D  A+      
Sbjct: 399 LCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPD 458

Query: 382 --SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +Y   I+  C +G+   AE    Q++  GV  +   +N LI+G++  G    AF  +K
Sbjct: 459 VVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLK 518

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPAD----------------AKTALDSMIEDGHSP 482
            M   G   + ++Y  L+   L+K    D                 +  L+ +I+   S 
Sbjct: 519 NMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSS 578

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
           AS ++   +  L +  R++ A   +  M    +  + D+   ++E       ++EAL  +
Sbjct: 579 ASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFL 638

Query: 543 DLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
           D M++   +P  +S   ++  L E+G    A  +    L ++   D  +++ ++D LL  
Sbjct: 639 DSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQK 698

Query: 600 GKTLNAYSILFKIMEK 615
           G T +  S L   ME+
Sbjct: 699 GNTADC-SRLLSFMEE 713



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 131/562 (23%), Positives = 221/562 (39%), Gaps = 49/562 (8%)

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
           R++ +Y  L       G    AKR+ + +L  G+ P  H Y   + G+  +     A R 
Sbjct: 72  RNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRL 131

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  M  RG +    TY  ++ G      + EA  +FA M      P    Y+ M+ G   
Sbjct: 132 FLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCG 191

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM--------------------- 282
             RA +A+ +  +       PN   Y AL+ G C  G +                     
Sbjct: 192 AGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRT 251

Query: 283 -------------VEVQKVL-REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
                        VE   VL   M+E  + P +   +  L+  QC  GHL  A  +L +M
Sbjct: 252 YTQLICGFCKSGKVERAMVLYSRMIEAGLAP-NVVTYTTLIQGQCSEGHLEHAFRLLHSM 310

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               +        +LI+  CK    + A + L  LV+K I         +    Y  MI 
Sbjct: 311 EACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGI--------KVNQVIYTSMID 362

Query: 389 HLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC +G+   A    ++++ +G V D   +++LI G  +E     A  ++  M   GV  
Sbjct: 363 ALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQA 422

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +A  +  LI+ +LR+      K   D M   G  P    +   + S  +DGR++ A  +M
Sbjct: 423 NAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMM 482

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKT 567
             M++ GV+ NL     +++     G V +A   +  M+ +G  PN +S   +L    K 
Sbjct: 483 IQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKK 542

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDAL--LAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
            +   L+   +    I+D+   E++L+ +  L        Y    + + K  V   + + 
Sbjct: 543 NSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSK--VDRLEEAK 600

Query: 626 KLIAGLNQEGNTKQADILSRMI 647
             + G+     T   D+ + MI
Sbjct: 601 SFLVGMQSANLTPSEDVYTCMI 622



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 212/461 (45%), Gaps = 13/461 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A+  +  +  AGL   +  T+  +I+     G L HA  +L  M   G+  +E    V
Sbjct: 266 ERAMVLYSRMIEAGL-APNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLV 324

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI++  K G ++E+ +    + Q G++ +   Y ++   + + G++  A     K+++EG
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P  H Y+ ++ G     KL  AI    DM   G+  + V +  +I+ + R  + D  +
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPK 444

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +   M    ++P V++YT  I+ Y    R +DA  +  +M    V+PN  TY  L+ G 
Sbjct: 445 MISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGY 504

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK--SGH-LNAAADVLKAMIRLSI 333
            + G + +    L+ M++    P D S +  LLG+  K  S H L A +  L  ++ + +
Sbjct: 505 ANLGLVSQAFSSLKNMIDNGCKPNDES-YTVLLGLLLKKNSYHDLVADSISLWKIVDMKV 563

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLL---DKLVEKEIILRPQSTLDMEASS--YNPMIQ 388
             E     I ++    + +YD  I+ L   D+L E +  L    + ++  S   Y  MI+
Sbjct: 564 LEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIE 623

Query: 389 HLCHNGQTGKAEI-FFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             C+  +  K  + F   ++K+  L  + ++  +I    +EG+  +A  I   +  +   
Sbjct: 624 -CCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYN 682

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           RD  A+  LI+  L+KG  AD    L  M E    P S+++
Sbjct: 683 RDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIY 723



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/461 (21%), Positives = 207/461 (44%), Gaps = 15/461 (3%)

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           E + +R    ++ TY T+IN Y     +  A++  + +    + P   +YT+ + GY   
Sbjct: 63  ESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRT 122

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
                A R+F  M          TY ALL GLC AG + E   V   M      P D+ V
Sbjct: 123 GLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAP-DSHV 181

Query: 305 FMKLLGVQCKSGHLNAAADVLK-AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
           +  ++   C +G    A  +L  AM +  +P  A  Y  LI+ +C     + AI +   +
Sbjct: 182 YSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA-VYNALIDGYCSTGDLELAIDIFKGM 240

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
             K  +  P         +Y  +I   C +G+  +A + + ++++ G+  + V +  LI+
Sbjct: 241 QSKGCL--PN------VRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQ 292

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G   EG+ + AF ++  M   G+  +    + LI++  + G   +A+  L S+++ G   
Sbjct: 293 GQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKV 352

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
              ++ S++++L + G+   A  +M+ ++ +G   +  + + +++ L     + EA+  +
Sbjct: 353 NQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLL 412

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
           + M++SG   N   F  L+     + ++ +   + D         D+ +Y   + +    
Sbjct: 413 NDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQD 472

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           G+  +A S++ ++++ G   +  + + LI G    G   QA
Sbjct: 473 GRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQA 513


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 208/415 (50%), Gaps = 12/415 (2%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           SE  +   R VE    F  D  T+  ++  L + G    A  +   M ++ ++     + 
Sbjct: 192 SEALVLIDRMVEYG--FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           ++I+S  K G   +++ +F+ M+  G++  V +Y +L   +   G++    +   +M+  
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            I P   T++ ++  F    KL  A   + +M +RGI+ D +TYN++I+G+ +   + EA
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            ++F  M  K  EP +++Y+ +I  Y   +R DD +R+F E+ S  + PN +TY  L+ G
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            C +GK+   +++ +EMV R +PP   +  + L G+ C +G LN A ++ + M +  +  
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL-CDNGELNKALEIFEKMQKSRMTL 488

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
             G Y I+I   C A   D A  L   L +K +  +P      +  +YN MI  LC  G 
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV--KP------DVVTYNVMIGGLCKKGS 540

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
             +A++ FR++ + G   D   +N LIR H       S+ E+++ M   G   D+
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 233/522 (44%), Gaps = 16/522 (3%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D N + + +   K  +  L F + +E  G+  HD  T   MI    R  KL  
Sbjct: 65  RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI-EHDMYTMTIMINCYCRKKKLLF 123

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +L    K G + D   F  L+  +  +G V E+V + D M ++     + +   L  
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            +  +GR   A    ++M+  G +P   TY  +L     S     A+  F  M+ R I  
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            VV Y+ +I+   +    D+A  LF EM+ K I+  V++Y+++I G     + DD  ++ 
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM   ++ P+ VT++AL+      GK++E +++  EM+ R I P D   +  L+   CK
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP-DTITYNSLIDGFCK 362

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              L+ A  +   M+      +   Y ILI ++CKA+  D  ++L  ++  K +I  P +
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI--PNT 420

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSA 433
                  +YN ++   C +G+   A+  F++++ +GV    V +  L+ G    G  + A
Sbjct: 421 I------TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            EI + M +  +      Y  +I       +  DA +   S+ + G  P    +  ++  
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           L + G +  A  + + M E G   + D    I    L+R H+
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPD-DFTYNI----LIRAHL 571



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 228/504 (45%), Gaps = 13/504 (2%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F  M+     PT   +N +      + + +  + F + M+  GI  D+ T   MIN Y R
Sbjct: 58  FESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCR 117

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
            KK+  A  +     +   EP  I+++T++ G+    R  +A+ + D M     +P+ VT
Sbjct: 118 KKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVT 177

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
            + L+ GLC  G++ E   ++  MVE    P D   +  +L   CKSG+   A D+ + M
Sbjct: 178 VSTLINGLCLKGRVSEALVLIDRMVEYGFQP-DEVTYGPVLNRLCKSGNSALALDLFRKM 236

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
              +I      Y I+I++ CK   +D A+ L +++  K I          +  +Y+ +I 
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI--------KADVVTYSSLIG 288

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC++G+        R+++ + ++ D V F+ LI    KEG    A E+   M  RG+  
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  LI+ + ++    +A    D M+  G  P    +  ++ S  +  RV    R+ 
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEK 564
           + +  KG+  N      ++      G +  A      M+  G   SV  +  LL  L + 
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G+   A+++ +        + +  Y  ++  +  A K  +A+S+   + +KG   D  + 
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528

Query: 625 DKLIAGLNQEGNTKQADILSRMIR 648
           + +I GL ++G+  +AD+L R ++
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMK 552



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/429 (18%), Positives = 179/429 (41%), Gaps = 13/429 (3%)

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           EK  + +   +I    +SY   ++  +   + +DA+ +F+ M      P  + +  L   
Sbjct: 20  EKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSA 79

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           +    +   V    + M    I   D      ++   C+   L  A  VL    +L    
Sbjct: 80  VARTKQYDLVLGFCKGMELNGI-EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEP 138

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   +  L+  FC       A+ L+D++VE +   RP      +  + + +I  LC  G+
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMK--QRP------DLVTVSTLINGLCLKGR 190

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A +   ++++ G   D V +  ++    K GN   A ++ + M  R +      Y  
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I+S  + G   DA +  + M   G       + S++  L  DG+    +++++ M+ + 
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           +  ++   + +++  +  G + EA    + M+  G  P+   ++SL+    ++     A 
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           ++ D  + + C  D+ +Y  ++++   A +  +   +  +I  KG + +  + + L+ G 
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430

Query: 632 NQEGNTKQA 640
            Q G    A
Sbjct: 431 CQSGKLNAA 439



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 35/259 (13%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+   +   L+ A  +   M  KG + D   + +LI SY K   V + +++F
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             +   G+  +  +Y+ L     + G+   AK  F +M+S G+ P+  TY ++L G   +
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468

Query: 175 LKLETAIRFFEDM-KSR----------------------------------GISLDVVTY 199
            +L  A+  FE M KSR                                  G+  DVVTY
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N MI G  +   + EA+ LF +MKE    P   +Y  +I+ ++       ++ + +EMK 
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588

Query: 260 FDVKPNAVTYTALLPGLCD 278
                ++ T   ++  L D
Sbjct: 589 CGFSADSSTIKMVIDMLSD 607


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 155/627 (24%), Positives = 283/627 (45%), Gaps = 41/627 (6%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL---LDMPKKGVQWDEDM----- 93
           FF WV    +F+ +  T   +  IL   G   +A  +L   +D     V+  + +     
Sbjct: 93  FFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYK 152

Query: 94  -------------FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
                        FE+LI+ Y KKG + E+V +F   K       +   ++L K +L+  
Sbjct: 153 EINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGN 212

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R  +  + +  ML   I P  +TY  ++  +    K+E       DM+ +G   ++VTY+
Sbjct: 213 RVELFWKVYKGMLG-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYS 271

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I G  R   +DEA +L   M  K + P    Y T+I G+   +R+ +   + DEM + 
Sbjct: 272 VVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTM 331

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            +KP+ V YTAL+ G      +    +V  EM  R I     + +  + G+ CK G L  
Sbjct: 332 GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGL-CKIGDLEK 390

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A D+   M  + I  +   Y  LIE + K +  ++A +LL + ++KE         ++ A
Sbjct: 391 AEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIE-IKKE---------NLTA 440

Query: 381 SSY--NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEI 436
           ++Y    ++  LCH G   +A   F++++  G L P  V +  +++G  KEG  + A +I
Sbjct: 441 NAYMCGAIVNGLCHCGDLTRANELFQEMISWG-LKPNIVIYTTIVKGLVKEGRFEEAIKI 499

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           + +M  +G+  D   Y  +I  + + G+  + K+ L  MI  G  P    + + +     
Sbjct: 500 LGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCR 559

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
            G +Q A R    M++ G+  N  +   +++     G+  +A  +   M+  G +P+  +
Sbjct: 560 AGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQT 619

Query: 557 ---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
              L+  LS+ GK   A+ +    L +  + D+ +Y  ++  L   G    A+ +   + 
Sbjct: 620 HSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMC 679

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +KG   +  + + LI GL + G   +A
Sbjct: 680 KKGINPNIVTYNALINGLCKLGEIAKA 706



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 163/639 (25%), Positives = 280/639 (43%), Gaps = 66/639 (10%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L ++G L  A  +  +M   G++ D   +  LIE Y K   VQ   K ++++
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYK---VQNMEKAYELL 430

Query: 118 KQLGVER-SVKSY--DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            ++  E  +  +Y   A+   +   G    A   F +M+S G++P    Y  ++ G    
Sbjct: 431 IEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKE 490

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + E AI+    MK +G+S DV  YNT+I G+ +  KM+E +    EM  K ++P V +Y
Sbjct: 491 GRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTY 550

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
              I GY        A R F EM    + PN V  T L+ G C  G   +     R M++
Sbjct: 551 GAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLD 610

Query: 295 RYIPP--KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           + + P  + +SV +  L    K+G L  A  V   ++   +  +   Y  LI N CK   
Sbjct: 611 QGVLPDVQTHSVLIHGLS---KNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
              A +L D + +K I        +    +YN +I  LC  G+  KA   F  + +KG+ 
Sbjct: 668 LKAAFELHDDMCKKGI--------NPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLA 719

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            + V ++ +I G+ K  N   AF++   M   GVP D+  Y  LI+   + G    A + 
Sbjct: 720 RNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSL 779

Query: 472 LDSMIEDG--HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              M+E+G   +PA   F ++++  F+ G++  A ++++ MV+  +  N      ++E  
Sbjct: 780 FLGMVEEGIASTPA---FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYH 836

Query: 530 LMRGHVEEA----------------------------LGR-------IDLMMQSGSVPNF 554
              G+++EA                            +GR        D M+  G  P+ 
Sbjct: 837 CTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPD- 895

Query: 555 DSLLSVLSE----KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
           D   SV+ +    +G  I A+KL+D  L     +    Y  ++DAL           +L 
Sbjct: 896 DLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLD 955

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           ++ ++G      +   L+   ++ G T +A  +L  M+R
Sbjct: 956 EVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 139/590 (23%), Positives = 263/590 (44%), Gaps = 14/590 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I    RVGK+   + +L DM +KG   +   + V+I    + G V E++++ 
Sbjct: 231 DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELK 290

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G+      Y  L     R+ R    K   ++M + G++P    Y  ++ GF   
Sbjct: 291 RSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQ 350

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A +  E+M +R I L+  TY  +I+G  +   +++AE LF+EM    I+P + +Y
Sbjct: 351 SDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTY 410

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I+GY  V+  + A  +  E+K  ++  NA    A++ GLC  G +    ++ +EM+ 
Sbjct: 411 NCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMIS 470

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P +  ++  ++    K G    A  +L  M    +  +   Y  +I  FCKA   +
Sbjct: 471 WGLKP-NIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
                L +++ K   L+P         +Y   I   C  G+   AE  F +++  G+  +
Sbjct: 530 EGKSYLVEMIAKG--LKPN------VYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPN 581

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V   +LI G+ K+GN   AF   + M  +GV  D   +  LI    + G+  +A     
Sbjct: 582 DVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFS 641

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            +++ G  P    + S++ +L ++G ++ A  +   M +KG+  N+     ++  L   G
Sbjct: 642 ELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLG 701

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI---IDLASYE 590
            + +A    D + + G   N  +  ++++   K+    +      G   +    D   Y 
Sbjct: 702 EIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYC 761

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            ++D    AG T  A S+   ++E+ G+    + + LI G  + G   +A
Sbjct: 762 ALIDGCCKAGNTEKALSLFLGMVEE-GIASTPAFNALIDGFFKLGKLIEA 810



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/545 (22%), Positives = 252/545 (46%), Gaps = 63/545 (11%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L   G L  A  +  +M   G++ +  ++  +++   K+G  +E++KI  +MK  G+   
Sbjct: 452 LCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPD 511

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V  Y+ +     + G+    K Y  +M+++G++P  +TY   + G+  + +++ A R F 
Sbjct: 512 VFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFI 571

Query: 186 DMKSRGISL-----------------------------------DVVTYNTMINGYNRFK 210
           +M   GI+                                    DV T++ +I+G ++  
Sbjct: 572 EMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNG 631

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           K+ EA  +F+E+ +K + P V +YT++I           A  + D+M    + PN VTY 
Sbjct: 632 KLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYN 691

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           AL+ GLC  G++ + +++   + E+ +  +++  +  ++   CKS +L  A  +   M  
Sbjct: 692 ALINGLCKLGEIAKARELFDGIPEKGLA-RNSVTYSTIIAGYCKSANLTEAFQLFHGMKL 750

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP------------------ 372
           + +P ++  Y  LI+  CKA   ++A+ L   +VE+ I   P                  
Sbjct: 751 VGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEA 810

Query: 373 -QSTLDM-------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRG 423
            Q   DM          +Y  +I++ C  G   +AE  F ++ K+ V+  V  + +L+ G
Sbjct: 811 YQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHG 870

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
           +++ G     F +   M  RG+  D  A+  +++++L++G    A   +D M+ +G +  
Sbjct: 871 YNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVC 930

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
            +L+  ++++L +   +    +V+  + ++G K +L     ++      G  +EAL  ++
Sbjct: 931 KNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLE 990

Query: 544 LMMQS 548
            M++S
Sbjct: 991 SMVRS 995



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 156/312 (50%), Gaps = 2/312 (0%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           N +  T+  +I  L ++G++  AR +   +P+KG+  +   +  +I  Y K   + E+ +
Sbjct: 684 NPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQ 743

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +F  MK +GV      Y AL     + G    A   F  M+ EGI  T   +N ++ GFF
Sbjct: 744 LFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP-AFNALIDGFF 802

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
              KL  A +  EDM    I+ + VTY  +I  +     + EAE+LF EM+++N+ P V+
Sbjct: 803 KLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVL 862

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +YT+++ GY  + R  +   +FDEM +  +KP+ + ++ ++      G  ++  K++ +M
Sbjct: 863 TYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDM 922

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           +   +    N ++  L+   CK  +L+    VL  + +          G L+  F +A  
Sbjct: 923 LSEGVNVCKN-LYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGR 981

Query: 353 YDRAIKLLDKLV 364
            D A+++L+ +V
Sbjct: 982 TDEALRVLESMV 993


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 250/550 (45%), Gaps = 55/550 (10%)

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           +G E +V +Y+ L   + R  R+  A   F +M+ +  +P   T+ ++L G   S +LE 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A +    MK  G   D   YN +I+GY++ K   +A K  AEM + +  PTV++YT ++ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIP 298
           G    ER  DA+++ DEM+     PN  TY  ++ GLC+  K+ E +K+L EM  R Y P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 299 ------------------------------PKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
                                           D   +  ++   CKSG L++A+ +L  M
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHM 240

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
                  +   Y  LI+ FCK    +RA+ LLD ++  ++  RP         +YN ++ 
Sbjct: 241 SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML--KLGCRPNMV------AYNSLLG 292

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            L   G  GKAE    ++ ++G   D V++N  I G  K      A  +   M  RG   
Sbjct: 293 ALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 352

Query: 448 DADAYICLIESY---------LRKGEPADAKTALDSMIEDGH--SPASSLFRSVMESLFE 496
           +A +Y  LI            L KG   D   AL S + D     P    +  +++S  +
Sbjct: 353 NASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK 412

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF-- 554
             ++  A ++ K M+EK    N+     ++  L +   + +A   +  M+  G +P+F  
Sbjct: 413 RRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVT 471

Query: 555 -DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
             +L+  + + GK+ AA++L +  +   C+ D+ +Y  ++  L+       AY +  K++
Sbjct: 472 YGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLV 531

Query: 614 EKGGVTDWKS 623
           E+  V D K+
Sbjct: 532 ERRWVPDDKT 541



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/555 (23%), Positives = 246/555 (44%), Gaps = 43/555 (7%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           + H+  T+ K++  L R  + + A  +  +M  K  Q D   F +L+    +   ++++ 
Sbjct: 3   YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKAR 62

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K+   MK++G       Y+AL     +   +  A ++  +M+     PT  TY  ++ G 
Sbjct: 63  KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGL 122

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + +   A++  ++M+ +G S ++ TYN ++ G    +K+DEA+K+  EM  +   P V
Sbjct: 123 CKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDV 182

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++Y + IKG    +R D+A +    M    V P+ V+YT ++ GLC +G +    ++L  
Sbjct: 183 VTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDH 239

Query: 292 MVERYIPP---------------------------------KDNSV-FMKLLGVQCKSGH 317
           M  R   P                                 + N V +  LLG   + GH
Sbjct: 240 MSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 299

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ--ST 375
           +  A D+L  M R     +   Y   I+  CKAE   +A  + D++VE+         S 
Sbjct: 300 IGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSM 359

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NNLIRGHSKEGNPDSA 433
           L ++   Y  ++  LC  G+  +A   F +++ + + +P  F  N ++  H K    D A
Sbjct: 360 LIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 419

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            +I K M  +         I L+         +DA+T L +M+++G  P    + +++++
Sbjct: 420 LQIHKQMLEKNCCNVVTWNI-LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 478

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           + + G+   A  + +  V+ G   ++   + ++  L+     EEA      +++   VP+
Sbjct: 479 MCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPD 538

Query: 554 FDSLLSVLSEKGKTI 568
            D  L +L  K K +
Sbjct: 539 -DKTLGLLHRKLKLL 552


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 208/415 (50%), Gaps = 12/415 (2%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           SE  +   R VE    F  D  T+  ++  L + G    A  +   M ++ ++     + 
Sbjct: 221 SEALVLIDRMVEYG--FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 278

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           ++I+S  K G   +++ +F+ M+  G++  V +Y +L   +   G++    +   +M+  
Sbjct: 279 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 338

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            I P   T++ ++  F    KL  A   + +M +RGI+ D +TYN++I+G+ +   + EA
Sbjct: 339 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 398

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            ++F  M  K  EP +++Y+ +I  Y   +R DD +R+F E+ S  + PN +TY  L+ G
Sbjct: 399 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 458

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            C +GK+   +++ +EMV R +PP   +  + L G+ C +G LN A ++ + M +  +  
Sbjct: 459 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL-CDNGELNKALEIFEKMQKSRMTL 517

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
             G Y I+I   C A   D A  L   L +K +  +P      +  +YN MI  LC  G 
Sbjct: 518 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV--KP------DVVTYNVMIGGLCKKGS 569

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
             +A++ FR++ + G   D   +N LIR H       S+ E+++ M   G   D+
Sbjct: 570 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 624



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 233/522 (44%), Gaps = 16/522 (3%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D N + + +   K  +  L F + +E  G+  HD  T   MI    R  KL  
Sbjct: 94  RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI-EHDMYTMTIMINCYCRKKKLLF 152

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +L    K G + D   F  L+  +  +G V E+V + D M ++     + +   L  
Sbjct: 153 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 212

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            +  +GR   A    ++M+  G +P   TY  +L     S     A+  F  M+ R I  
Sbjct: 213 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 272

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            VV Y+ +I+   +    D+A  LF EM+ K I+  V++Y+++I G     + DD  ++ 
Sbjct: 273 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 332

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM   ++ P+ VT++AL+      GK++E +++  EM+ R I P D   +  L+   CK
Sbjct: 333 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP-DTITYNSLIDGFCK 391

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              L+ A  +   M+      +   Y ILI ++CKA+  D  ++L  ++  K +I  P +
Sbjct: 392 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI--PNT 449

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSA 433
                  +YN ++   C +G+   A+  F++++ +GV    V +  L+ G    G  + A
Sbjct: 450 I------TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 503

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            EI + M +  +      Y  +I       +  DA +   S+ + G  P    +  ++  
Sbjct: 504 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           L + G +  A  + + M E G   + D    I    L+R H+
Sbjct: 564 LCKKGSLSEADMLFRKMKEDGCTPD-DFTYNI----LIRAHL 600



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 228/504 (45%), Gaps = 13/504 (2%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F  M+     PT   +N +      + + +  + F + M+  GI  D+ T   MIN Y R
Sbjct: 87  FESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCR 146

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
            KK+  A  +     +   EP  I+++T++ G+    R  +A+ + D M     +P+ VT
Sbjct: 147 KKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVT 206

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
            + L+ GLC  G++ E   ++  MVE    P D   +  +L   CKSG+   A D+ + M
Sbjct: 207 VSTLINGLCLKGRVSEALVLIDRMVEYGFQP-DEVTYGPVLNRLCKSGNSALALDLFRKM 265

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
              +I      Y I+I++ CK   +D A+ L +++  K I          +  +Y+ +I 
Sbjct: 266 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI--------KADVVTYSSLIG 317

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC++G+        R+++ + ++ D V F+ LI    KEG    A E+   M  RG+  
Sbjct: 318 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 377

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  LI+ + ++    +A    D M+  G  P    +  ++ S  +  RV    R+ 
Sbjct: 378 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 437

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEK 564
           + +  KG+  N      ++      G +  A      M+  G   SV  +  LL  L + 
Sbjct: 438 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 497

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G+   A+++ +        + +  Y  ++  +  A K  +A+S+   + +KG   D  + 
Sbjct: 498 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 557

Query: 625 DKLIAGLNQEGNTKQADILSRMIR 648
           + +I GL ++G+  +AD+L R ++
Sbjct: 558 NVMIGGLCKKGSLSEADMLFRKMK 581



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/429 (18%), Positives = 179/429 (41%), Gaps = 13/429 (3%)

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           EK  + +   +I    +SY   ++  +   + +DA+ +F+ M      P  + +  L   
Sbjct: 49  EKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSA 108

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           +    +   V    + M    I   D      ++   C+   L  A  VL    +L    
Sbjct: 109 VARTKQYDLVLGFCKGMELNGI-EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEP 167

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   +  L+  FC       A+ L+D++VE +   RP      +  + + +I  LC  G+
Sbjct: 168 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMK--QRP------DLVTVSTLINGLCLKGR 219

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A +   ++++ G   D V +  ++    K GN   A ++ + M  R +      Y  
Sbjct: 220 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 279

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I+S  + G   DA +  + M   G       + S++  L  DG+    +++++ M+ + 
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           +  ++   + +++  +  G + EA    + M+  G  P+   ++SL+    ++     A 
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 399

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           ++ D  + + C  D+ +Y  ++++   A +  +   +  +I  KG + +  + + L+ G 
Sbjct: 400 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 459

Query: 632 NQEGNTKQA 640
            Q G    A
Sbjct: 460 CQSGKLNAA 468



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 35/259 (13%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+   +   L+ A  +   M  KG + D   + +LI SY K   V + +++F
Sbjct: 378 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 437

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             +   G+  +  +Y+ L     + G+   AK  F +M+S G+ P+  TY ++L G   +
Sbjct: 438 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 497

Query: 175 LKLETAIRFFEDM-KSR----------------------------------GISLDVVTY 199
            +L  A+  FE M KSR                                  G+  DVVTY
Sbjct: 498 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 557

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N MI G  +   + EA+ LF +MKE    P   +Y  +I+ ++       ++ + +EMK 
Sbjct: 558 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 617

Query: 260 FDVKPNAVTYTALLPGLCD 278
                ++ T   ++  L D
Sbjct: 618 CGFSADSSTIKMVIDMLSD 636


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 223/486 (45%), Gaps = 43/486 (8%)

Query: 62   MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
            +I  + ++G++  A  +LL M  KG   D   +  ++  Y + G + +  K+ ++MK+ G
Sbjct: 695  VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754

Query: 122  VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            ++ +   Y ++  L+ R  +   A+  F++M+ +GI P    Y  ++ GF     +  A 
Sbjct: 755  LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814

Query: 182  RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            +FF +M SR I+ DV+TY  +I+G+ +   M EA KLF EM  K +EP  +++T +I GY
Sbjct: 815  KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 874

Query: 242  VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK- 300
                   DA R+ + M      PN VTYT L+ GLC  G +    ++L EM +  + P  
Sbjct: 875  CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934

Query: 301  ---------------------------------DNSVFMKLLGVQCKSGHLNAAADVLKA 327
                                             D   +  L+   CKSG ++ A ++LK 
Sbjct: 935  FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 994

Query: 328  MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
            M+   +      + +L+  FC   M +   KLL+ ++ K I           A+++N ++
Sbjct: 995  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA--------PNATTFNSLV 1046

Query: 388  QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
            +  C       A   ++ +  +GV  D   + NL++GH K  N   A+ + + M  +G  
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106

Query: 447  RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
                 Y  LI+ +L++ +  +A+   D M  +G +    +F    ++ ++  R  T    
Sbjct: 1107 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDP 1166

Query: 507  MKSMVE 512
            +  ++E
Sbjct: 1167 IDEIIE 1172



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 219/477 (45%), Gaps = 16/477 (3%)

Query: 62   MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI-VQESVKIFDIMKQL 120
              ++L   G L  AR +   M   G+    D   V +    K       ++ +F    ++
Sbjct: 624  FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV 683

Query: 121  GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
            GV  +V SY+ +   + + GR   A      M  +G  P   +Y+ ++ G+    +L+  
Sbjct: 684  GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 743

Query: 181  IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
             +  E MK +G+  +   Y ++I    R  K+ EAE+ F+EM  + I P  + YTT+I G
Sbjct: 744  WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 803

Query: 241  YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
            +        A + F EM S D+ P+ +TYTA++ G C  G MVE  K+  EM  + + P 
Sbjct: 804  FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP- 862

Query: 301  DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
            D+  F +L+   CK+GH+  A  V   MI+         Y  LI+  CK    D A +LL
Sbjct: 863  DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 922

Query: 361  DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
             ++   +I L+P         +YN ++  LC +G   +A     +    G+  D V +  
Sbjct: 923  HEMW--KIGLQPN------IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 974

Query: 420  LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            L+  + K G  D A EI+K M  +G+      +  L+  +   G   D +  L+ M+  G
Sbjct: 975  LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034

Query: 480  HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             +P ++ F S+++       ++ A+ + K M  +GV  +     K  E L+ +GH +
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD----GKTYENLV-KGHCK 1086



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/481 (23%), Positives = 220/481 (45%), Gaps = 12/481 (2%)

Query: 71   KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            K   A  +  + P+ GV W+   + ++I    + G ++E+  +  +M+  G    V SY 
Sbjct: 669  KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 728

Query: 131  ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
             +     R G      +    M  +G++P  + Y  ++       KL  A   F +M  +
Sbjct: 729  TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 788

Query: 191  GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
            GI  D V Y T+I+G+ +   +  A K F EM  ++I P V++YT +I G+  +    +A
Sbjct: 789  GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 848

Query: 251  LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
             ++F EM    ++P++VT+T L+ G C AG M +  +V   M++    P +   +  L+ 
Sbjct: 849  GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLID 907

Query: 311  VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
              CK G L++A ++L  M ++ +      Y  ++   CK+   + A+KL+ +        
Sbjct: 908  GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF------- 960

Query: 371  RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEG 428
               + L+ +  +Y  ++   C +G+  KA+   ++++ KG L P  V FN L+ G    G
Sbjct: 961  -EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLHG 1018

Query: 429  NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
              +   +++  M  +G+  +A  +  L++ Y  +     A      M   G  P    + 
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078

Query: 489  SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            ++++   +   ++ A  + + M  KG   ++   + +++  L R    EA    D M + 
Sbjct: 1079 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 1138

Query: 549  G 549
            G
Sbjct: 1139 G 1139



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/547 (23%), Positives = 240/547 (43%), Gaps = 23/547 (4%)

Query: 97   LIESYGKK---GIVQESVKIFDIM----KQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
            LI S+ ++    +    V+ FD++    K  G +  V  +D  F++++  G    A+R F
Sbjct: 584  LISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRV--FDVFFQVLVDFGLLREARRVF 641

Query: 150  NKMLSEGIEPTRHTYNVMLWGFFL-SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
             KML+ G+  +  + NV L        K  TAI  F +    G+  +V +YN +I+   +
Sbjct: 642  EKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQ 701

Query: 209  FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
              ++ EA  L   M+ K   P VISY+T++ GY      D   ++ + MK   +KPN+  
Sbjct: 702  LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 761

Query: 269  YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
            Y +++  LC   K+ E ++   EM+ + I P D  V+  L+   CK G + AA+     M
Sbjct: 762  YGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEM 820

Query: 329  IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
                I  +   Y  +I  FC+      A KL  ++  K         L+ ++ ++  +I 
Sbjct: 821  HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--------GLEPDSVTFTELIN 872

Query: 389  HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
              C  G    A      +++ G   + V +  LI G  KEG+ DSA E++  M + G+  
Sbjct: 873  GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932

Query: 448  DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
            +   Y  ++    + G   +A   +      G +  +  + ++M++  + G +  A  ++
Sbjct: 933  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992

Query: 508  KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
            K M+ KG++  +     ++    + G +E+    ++ M+  G  PN   F+SL+     +
Sbjct: 993  KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 1052

Query: 565  GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
                AA  +      R    D  +YE ++     A     A+ +  ++  KG      + 
Sbjct: 1053 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 1112

Query: 625  DKLIAGL 631
              LI G 
Sbjct: 1113 SVLIKGF 1119



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 154/309 (49%), Gaps = 1/309 (0%)

Query: 55   DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
            D  T+  +I    ++G +  A  +  +M  KG++ D   F  LI  Y K G ++++ ++ 
Sbjct: 828  DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 887

Query: 115  DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            + M Q G   +V +Y  L   + + G    A    ++M   G++P   TYN ++ G   S
Sbjct: 888  NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 947

Query: 175  LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              +E A++   + ++ G++ D VTY T+++ Y +  +MD+A+++  EM  K ++PT++++
Sbjct: 948  GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 1007

Query: 235  TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
              ++ G+      +D  ++ + M +  + PNA T+ +L+   C    +     + ++M  
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 1067

Query: 295  RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
            R + P D   +  L+   CK+ ++  A  + + M           Y +LI+ F K + + 
Sbjct: 1068 RGVGP-DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 1126

Query: 355  RAIKLLDKL 363
             A ++ D++
Sbjct: 1127 EAREVFDQM 1135



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 7/222 (3%)

Query: 6    WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
            W   LQ  I      F +N + N L  + N E A++     E AGL N D  T+  +++ 
Sbjct: 926  WKIGLQPNI------FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL-NADTVTYTTLMDA 978

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
              + G+++ A+ IL +M  KG+Q     F VL+  +   G++++  K+ + M   G+  +
Sbjct: 979  YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1038

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
              ++++L K    R     A   +  M S G+ P   TY  ++ G   +  ++ A   F+
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 1098

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
            +MK +G S+ V TY+ +I G+ + KK  EA ++F +M+ + +
Sbjct: 1099 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 151/640 (23%), Positives = 299/640 (46%), Gaps = 18/640 (2%)

Query: 23  HNLVYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           + + YNVL      +   E A  F + +E  GL   D  T+  +I  L +  + N A+ +
Sbjct: 256 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVP-DGFTYGALINGLCKSRRSNEAKAL 314

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           L +M    ++ +  ++  LI+ + ++G   E+ K+   M   GV+ +  +YD L + + +
Sbjct: 315 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 374

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G+   A     +M+ +   P   TYN+++ G F     + A R   +M++ GIS +V T
Sbjct: 375 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 434

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y+ MI+G  +  + ++A  L  EM  K ++P    Y  +I GY        A  IFD+M 
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 494

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
             +V P+   Y +L+ GL   G++ E  K   +M ER + P + + +  L+    K+G L
Sbjct: 495 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT-YSGLIHGYLKNGDL 553

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            +A  +++ M+   +      Y  L+E++ K++  ++       ++++ ++L        
Sbjct: 554 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML-------- 605

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           +   Y  +I +L  +G    A      + K G V D   +++LI G  K  + + AF I+
Sbjct: 606 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 665

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M ++GV  +   Y  LI+   + G+ + A+   +S++  G  P    + S+++   + 
Sbjct: 666 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 725

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--SVPNFD 555
           G +  A  +   M+  G+  +  + + +       G +E+A+  I+ M   G  S+ +F+
Sbjct: 726 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFN 785

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +L+    ++GK    +KLL   +GR  + +  + E ++  L  AGK    ++I  ++ +K
Sbjct: 786 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 845

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGS 655
              +  +    L   +  +G     D++  MIR     G+
Sbjct: 846 TSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGN 884



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 141/631 (22%), Positives = 286/631 (45%), Gaps = 58/631 (9%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           HG+++S   LQ  R VE +      R  H   +E   +V + + A+ +L++M ++G   +
Sbjct: 205 HGSQHS--VLQ--RAVEGSAA----RGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLN 256

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
              + VLI    + G V+E+      M+  G+     +Y AL   + +  R   AK   +
Sbjct: 257 TVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 316

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +M    ++P    Y  ++ GF      + A +  ++M + G+  + +TY+ ++ G  +  
Sbjct: 317 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 376

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +MD A  L  +M   +  P  I+Y  +I+G+       DA R+  EM++  + PN  TY+
Sbjct: 377 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYS 436

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            ++ GLC +G+  +   +L EM  + + P +  V+  L+   C+ G+++ A ++   M +
Sbjct: 437 IMIHGLCQSGEPEKASDLLEEMTTKGLKP-NAFVYAPLISGYCREGNVSLACEIFDKMTK 495

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
           ++         +L + +C                                  YN +I  L
Sbjct: 496 VN---------VLPDLYC----------------------------------YNSLIFGL 512

Query: 391 CHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              G+  ++  +F Q+ ++G+L +   ++ LI G+ K G+ +SA ++V+ M   G+  + 
Sbjct: 513 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 572

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             YI L+ESY +  +     +   SM++ G    + ++  ++ +L   G ++ A RV+  
Sbjct: 573 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 632

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           + + G   ++ + + ++  L      E+A G +D M + G  PN   +++L+  L + G 
Sbjct: 633 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 692

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A  + +  L +  + +  +Y  ++D     G   NA+ +  +++  G   D      
Sbjct: 693 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 752

Query: 627 LIAGLNQEGNTKQADIL--SRMIRGEMSRGS 655
           L  G +  G+ +QA  L     +RG  S  S
Sbjct: 753 LTTGCSSAGDLEQAMFLIEEMFLRGHASISS 783



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 119/549 (21%), Positives = 226/549 (41%), Gaps = 102/549 (18%)

Query: 24  NLVYNVLHGAKNSEH----ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
            + YN++       H    A +    +E AG+ + +  T+  MI  L + G+   A  +L
Sbjct: 397 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGI-SPNVYTYSIMIHGLCQSGEPEKASDLL 455

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M  KG++ +  ++  LI  Y ++G V  + +IFD M ++ V   +  Y++L   + + 
Sbjct: 456 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 515

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF---------------- 183
           GR   + +YF +M   G+ P   TY+ ++ G+  +  LE+A +                 
Sbjct: 516 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 575

Query: 184 -------------------FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
                              F+ M  +G+ LD   Y  +I+  +    M+ A ++ + +++
Sbjct: 576 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEK 635

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
               P V  Y+++I G       + A  I DEM    V PN V Y AL+ GLC +G +  
Sbjct: 636 NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISY 695

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA------- 337
            + V   ++ + + P +   +  L+   CK G ++ A  +   M+   I  +A       
Sbjct: 696 ARNVFNSILAKGLVP-NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 754

Query: 338 ----------------------GHYGI-----LIENFCKAEMYDRAIKLLDKLVEKEIIL 370
                                 GH  I     L++ FCK       +KLL  ++ + ++ 
Sbjct: 755 TGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLV- 813

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-------------------GV 411
              + L +E      +I  L   G+  +    F +L +K                   G 
Sbjct: 814 --PNALTIEN-----IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 866

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           +     +++IR H KEGN D A  +  ++  +  P    +Y+ ++++  RKG+ ++A   
Sbjct: 867 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 926

Query: 472 LDSMIEDGH 480
           L  M + G+
Sbjct: 927 LKEMDKRGN 935



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 162/364 (44%), Gaps = 33/364 (9%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  +I  L   G +  A  +L  + K G   D  ++  LI    K    +++  I 
Sbjct: 606 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 665

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M + GV+ ++  Y+AL   + + G    A+  FN +L++G+ P   TY  ++ G    
Sbjct: 666 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 725

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A   + +M + GI+ D   Y+ +  G +    +++A  L  EM  +    ++ S+
Sbjct: 726 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSF 784

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G+    +  + L++   +    + PNA+T   ++ GL +AGK+ EV  +  E+ +
Sbjct: 785 NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQ 844

Query: 295 RYIPPKD---NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           +         +S+FM ++      G +    DV+  MIR               + CK  
Sbjct: 845 KTSESAARHFSSLFMDMI----NQGKI--PLDVVDDMIR---------------DHCKEG 883

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             D+A+ L D +V K        +  M  SSY  ++ +LC  G+  +A    +++ K+G 
Sbjct: 884 NLDKALMLRDVIVAK--------SAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGN 935

Query: 412 LDPV 415
           L P 
Sbjct: 936 LQPT 939


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 243/493 (49%), Gaps = 15/493 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  ++ S  K      ++ +F  M+  G+E  + + + L       G+   +     K+L
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G +P   T N ++ G  L  +++ ++ F + + ++G  +D V+Y T++NG  +  +  
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A KL   +++++  P V+ Y T+I G    +  ++A  ++ EM +  + PN +TY+ L+
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C AG+++E   +L EM+ + I P +   +  L+   CK G +  A ++L  M +  +
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINP-NVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  L++ +C       A ++   +V+K +        +    SYN MI  LC +
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGV--------NPNVYSYNIMIDRLCKS 303

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A    R+++ K ++ + V +++LI G  K G   SA +++K M  RG P D   Y
Sbjct: 304 KRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTY 363

Query: 453 ICLIESYLRKGEPADAKTAL-DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
             L+++ L K +  D  TAL   M E G  P    + ++++ L + GR + A ++ + ++
Sbjct: 364 TSLLDA-LCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLL 422

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
            KG + N+     ++  L   G ++EAL     M ++G +P+   F+ ++  L EK +  
Sbjct: 423 VKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQND 482

Query: 569 AAVKLLDFCLGRD 581
            A KLL   + +D
Sbjct: 483 KAEKLLHEMIAKD 495



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 190/413 (46%), Gaps = 11/413 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           +L F   V   G F  D+ ++  ++  L ++G+   A  +L  +  +  + +  M+  +I
Sbjct: 99  SLHFHDKVVAQG-FQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTII 157

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +   K  +V E+  ++  M   G+  +V +Y  L       G+ M A    N+M+ + I 
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNIN 217

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P  +TY +++       K++ A      M   G+  +VV+YNT+++GY    ++  A+++
Sbjct: 218 PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQM 277

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M +K + P V SY  MI      +R D+A+ +  E+   ++ PN VTY++L+ G C 
Sbjct: 278 FHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCK 337

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G++     +L+EM  R   P D   +  LL   CK+ +L+ A  +   M    I     
Sbjct: 338 LGRITSALDLLKEMYHRG-QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKY 396

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI+  CK   +  A KL   L+ K           +   +YN MI  LC  G   +
Sbjct: 397 TYTALIDGLCKGGRHKNAQKLFQHLLVK--------GCRINVWTYNVMISGLCKEGMLDE 448

Query: 399 AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           A     ++ + G + D V F  +IR   ++   D A +++  M  + + R  D
Sbjct: 449 ALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRD 501



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 102/463 (22%), Positives = 201/463 (43%), Gaps = 42/463 (9%)

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           TAI  F+ M+ +GI  D+ T N +IN +    +M  +  +  ++ +   +P  I+  T++
Sbjct: 28  TAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLM 87

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           KG         +L   D++ +   + + V+Y  LL GLC  G+     K+LR + +R   
Sbjct: 88  KGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTR 147

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +  ++  ++   CK   +N A D+   M    I      Y  LI  FC A     A  
Sbjct: 148 P-NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFG 206

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
           LL++++ K I        +    +Y  ++  LC  G+  +A+     + K+GV  + V++
Sbjct: 207 LLNEMILKNI--------NPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSY 258

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N L+ G+   G   +A ++   M ++GV  +  +Y  +I+   +     +A   L  ++ 
Sbjct: 259 NTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLH 318

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
               P +  + S+++   + GR+ +A  ++K M  +G   ++     +L+AL    ++++
Sbjct: 319 KNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDK 378

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A      M + G  PN                                  +Y  ++D L 
Sbjct: 379 ATALFMKMKERGIQPN--------------------------------KYTYTALIDGLC 406

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             G+  NA  +   ++ KG   +  + + +I+GL +EG   +A
Sbjct: 407 KGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEA 449



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/419 (22%), Positives = 187/419 (44%), Gaps = 13/419 (3%)

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P ++ +  ++   V ++    A+ +F +M+   ++P+  T   L+   C  G+M     V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L ++++    P   ++   + G+ C  G +  +      ++      +   Y  L+   C
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGL-CLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A+KLL  + ++    RP   +      YN +I  LC +    +A   + ++  
Sbjct: 127 KIGETRSALKLLRMIEDRST--RPNVVM------YNTIIDGLCKDKLVNEAYDLYSEMDA 178

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +G+  + + ++ LI G    G    AF ++  M  + +  +   Y  L+++  ++G+  +
Sbjct: 179 RGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKE 238

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           AK  L  M ++G  P    + ++M+     G VQ A ++  +MV+KGV  N+     +++
Sbjct: 239 AKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMID 298

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
            L     V+EA+  +  ++    VPN   + SL+    + G+  +A+ LL     R    
Sbjct: 299 RLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPA 358

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           D+ +Y  +LDAL        A ++  K+ E+G   +  +   LI GL + G  K A  L
Sbjct: 359 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417



 Score = 39.3 bits (90), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 4/170 (2%)

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           +P    F  ++ SL +     TA  + K M  KG++ +L  +  ++      G +  +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            +  +++ G  PN    ++L+  L  KG+   ++   D  + +   +D  SY  +L+ L 
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
             G+T +A  +L  I ++    +    + +I GL ++    +A D+ S M
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM 176


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 243/520 (46%), Gaps = 12/520 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +++ L +   ++ A  +L  M  KGV+ D   +  +I  Y   G  +ES K+F
Sbjct: 298 DVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMF 357

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G+   + ++++    + + GR   A+  F  M ++G  P   +Y+++L G+   
Sbjct: 358 RKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATE 417

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +       F  M  +GI  +   +N +I+ + +   MDEA  +F EM+ + + P V++Y
Sbjct: 418 GRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTY 477

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           +T+I  +  + R  DA+  F +M S  ++PN V Y +L+ G C  G +V+ ++++ EM+ 
Sbjct: 478 STLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMS 537

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + IP  +   F  ++   C  G +  A DV   +I +        +  LI+ +C     +
Sbjct: 538 KGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKME 597

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
           +A  +LD +V   I        + +  +YN ++   C +G+     I FR+++ K V   
Sbjct: 598 KAFGVLDAMVSVGI--------EPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPT 649

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V ++ ++ G    G   +A ++   M   G   D D Y  L++   R     +A T   
Sbjct: 650 TVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFH 709

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            +         ++  +V+ +L++  R + A+ +  ++   G+  N+     ++  LL  G
Sbjct: 710 KLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEG 769

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
            VEEA      M +SG  P+    + ++ +L +KG  + A
Sbjct: 770 SVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/565 (23%), Positives = 240/565 (42%), Gaps = 43/565 (7%)

Query: 82  MPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
           M K+G +   D+  F  +I  + K+G V ++  + + M Q GVE  V +Y+++   + + 
Sbjct: 253 MAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKA 312

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                A+    +M+ +G+EP   TY  ++ G+  S   + + + F  M S+G+   +VT+
Sbjct: 313 RAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTF 372

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N+ ++   +  +  +AE++F  M  K   P ++SY+ ++ GY    R  D   +F  M  
Sbjct: 373 NSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMAD 432

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             +  N   +  L+      G M E   V  EM  + + P D   +  L+   C+ G L 
Sbjct: 433 KGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRP-DVVTYSTLISAFCRMGRLA 491

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A +    MI + +      Y  LI  FC      +A +L+ +++ K I  RP       
Sbjct: 492 DAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIP-RPNIVF--- 547

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVK 438
              ++ +I  LC+ G+   A   F  ++  G     V FN+LI G+   G  + AF ++ 
Sbjct: 548 ---FSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 604

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G+  D   Y  L+  Y + G+  D       M+     P +  +  V++ LF  G
Sbjct: 605 AMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAG 664

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL 558
           R   A ++   M++ G   ++D    +L+ L      +EA   I L  + G++       
Sbjct: 665 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA---ITLFHKLGAM------- 714

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
                                 DC  D+     V++AL    +   A  +   I   G V
Sbjct: 715 ----------------------DCKFDITILNTVINALYKVRRREEANDLFAAISTSGLV 752

Query: 619 TDWKSSDKLIAGLNQEGNTKQADIL 643
            +  +   +I  L +EG+ ++AD +
Sbjct: 753 PNVSTYGVMIHNLLKEGSVEEADTM 777



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 153/327 (46%), Gaps = 15/327 (4%)

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
           P     YGIL++  C+A   D       +L+   +  R      +EA+++   ++ LCH 
Sbjct: 153 PLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTR-----TIEANTF---LKCLCHA 204

Query: 394 GQTGKA-EIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG--VPRDA 449
            +T +A ++   ++   G V + +++N +I+    +     A ++V+ M + G     D 
Sbjct: 205 KRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDV 264

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
            ++  +I  + ++GE + A   ++ M++ G  P    + S++++L +   +  A  V++ 
Sbjct: 265 VSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQ 324

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGK 566
           MV+KGV+ +      I+      GH +E+      M   G +P    F+S +S L + G+
Sbjct: 325 MVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGR 384

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
           +  A ++  +   +  + DL SY  +L      G+  +  ++   + +KG V +    + 
Sbjct: 385 SKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNI 444

Query: 627 LIAGLNQEGNTKQADILSRMIRGEMSR 653
           LI+   + G   +A ++   ++G+  R
Sbjct: 445 LISAHAKRGMMDEAMLVFTEMQGQGVR 471



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 41/217 (18%)

Query: 441 GRRGVPRDADAYI-CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           G R    +A+ ++ CL  +  R  E  D    L  M + G  P +  + +V++SL  D R
Sbjct: 186 GLRTRTIEANTFLKCLCHAK-RTDEAVD--VLLHRMSDLGCVPNAISYNTVIKSLCGDSR 242

Query: 500 VQTASRVMKSMVEKGVKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
            Q A  +++ M ++G + + D+V+   ++     +G V +A   I+ M+Q G  P     
Sbjct: 243 SQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEP----- 297

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
                                      D+ +Y  ++DAL  A     A  +L ++++KG 
Sbjct: 298 ---------------------------DVVTYNSIVDALCKARAMDKAELVLRQMVDKGV 330

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
             D  +   +I G +  G+ K++   ++M R   S+G
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKES---AKMFRKMTSKG 364


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/568 (25%), Positives = 250/568 (44%), Gaps = 33/568 (5%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           ++E+V + + +   G   ++ +Y+AL   + + GR   A     K++  G  P   TY  
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++ G     +   A + F++M  RG++LD V Y  +I    +  K+ +A  ++  M    
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             P V++ +TMI G     R   A+RIF  M++  + PN V Y+AL+ GLC A KM    
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           ++L +M + +  P D   +  L+   CKSG + AA      M+      +   Y ILI  
Sbjct: 182 EMLAQMKKAFCTP-DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 347 FCKAEMYDRAIKLL-------------------------DKLVEKEIILRPQSTLD---M 378
           FCKA   D A   L                         +K +E+ + L  + T +    
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
             ++YN ++  LC  G+  +A    R+++  G   D V + +LI G  KE     A+++ 
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           K M  RG+  D   Y  LI   L+ G+   A +   +M   G  P      ++++ L + 
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           GR+  A R+ KSM  +G+  N  + + ++  L     ++ AL  +  M ++   P+   +
Sbjct: 421 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 480

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
           + L+  L + G   AA    D  L   C  D+ +Y  ++     AG T  A  +   +  
Sbjct: 481 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSS 540

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQADI 642
                +  +   LI+GL +     +A +
Sbjct: 541 SRCSANVVTYGALISGLCKRRQLTKASL 568



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/547 (23%), Positives = 231/547 (42%), Gaps = 15/547 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L      E A+   R +   G    D  T+  +I+ LG+  +   A  +  +M
Sbjct: 24  YNALLNGLCKMGRLEEAIDLLRKIVDNGC-TPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 82

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  D   +  LI    + G + ++  ++  M   G    V +   +   + + GR 
Sbjct: 83  ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 142

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R F  M + G+ P    Y+ ++ G   + K++ A+     MK    + D +TYN +
Sbjct: 143 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVL 202

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD- 261
           I+G  +   ++ A   F EM E   +P V +Y  +I G+      D A     +  + + 
Sbjct: 203 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTING 262

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
              +  TYTA++  L    K+ E   ++ ++      P   + +  LL   CK G L  A
Sbjct: 263 CTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT-IATYNALLNGLCKMGRLEEA 321

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            D+L+ ++      +   Y  LI+   K +    A KL      KE+ LR    L ++  
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF-----KEMALRG---LALDTV 373

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            Y  +I+ L   G+  +A   ++ +   G + D V  + +I G SK G   +A  I K M
Sbjct: 374 CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 433

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             RG+  +   Y  LI    +  +   A   L  M +   +P +  +  +++ L + G V
Sbjct: 434 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 493

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ---SGSVPNFDSL 557
           + A      M+E G K ++     ++      G+ + A G  D M     S +V  + +L
Sbjct: 494 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGAL 553

Query: 558 LSVLSEK 564
           +S L ++
Sbjct: 554 ISGLCKR 560



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/540 (22%), Positives = 227/540 (42%), Gaps = 84/540 (15%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           K+E A+   E + + G +  + TYN ++NG  +  +++EA  L  ++ +    P V++YT
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           ++I G    +R+ +A ++F EM    +  + V YTAL+  L   GK+ +   V + M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P   ++   + G+  K+G + AA  + K+M    +      Y  LI   CKA   D 
Sbjct: 121 GCVPDVVTLSTMIDGLS-KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A+++L ++  K+    P +       +YN +I  LC +G    A  FF ++++ G   D 
Sbjct: 180 ALEMLAQM--KKAFCTPDTI------TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDV 231

Query: 415 VAFNNLIRGHSKEGNPDSA-FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
             +N LI G  K GN D+A   + +     G   D   Y  +++   +  +  +A   ++
Sbjct: 232 YTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALME 291

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN--------------- 518
            +  +G +P  + + +++  L + GR++ A  +++ +V+ G   +               
Sbjct: 292 KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK 351

Query: 519 ------------------LDLVA--KILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
                             LD V    ++  LL  G + +A      M   G VP+     
Sbjct: 352 RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 411

Query: 556 SLLSVLSEKGKTIAAVKLL--------------------DFCLGRD-------------- 581
           +++  LS+ G+  AAV++                       C  R               
Sbjct: 412 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 471

Query: 582 -CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            C  D  +Y  ++D L  +G    A +   +++E G   D  + + LI+G  + GNT  A
Sbjct: 472 FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 531



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 1/273 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L      E A+   R +   G    D  T+  +I+ LG+  +   A  +  +M
Sbjct: 305 YNALLNGLCKMGRLEEAIDLLRKIVDNGC-TPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 363

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  D   +  LI    + G + ++  ++  M   G    V +   +   + + GR 
Sbjct: 364 ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 423

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R F  M + G+ P    Y+ ++ G   + K++ A+     MK    + D +TYN +
Sbjct: 424 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 483

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +   ++ A   F EM E   +P V +Y  +I G+      D A  +FD+M S   
Sbjct: 484 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 543

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
             N VTY AL+ GLC   ++ +     + M ER
Sbjct: 544 SANVVTYGALISGLCKRRQLTKASLYFQHMKER 576



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 144/336 (42%), Gaps = 1/336 (0%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + +N++ +    A N++ A               D  T+  +++ L +  K+  A  ++ 
Sbjct: 232 YTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALME 291

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            +   G       +  L+    K G ++E++ +   +   G    V +Y +L   + +  
Sbjct: 292 KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK 351

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A + F +M   G+      Y  ++     + K+  A   ++ M S G   DVVT +
Sbjct: 352 RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 411

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           TMI+G ++  ++  A ++F  M+ + + P  + Y+ +I G     + D AL +  +MK  
Sbjct: 412 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 471

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+ +TY  L+ GLC +G +   +    EM+E    P D   +  L+   CK+G+ +A
Sbjct: 472 FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP-DVYTYNILISGFCKAGNTDA 530

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           A  V   M           YG LI   CK     +A
Sbjct: 531 ACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKA 566



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 8/146 (5%)

Query: 15  RALVPQFDHNLVYNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           R L P   + +VY+ L HG   A+  + AL+    +++A     D  T+  +I+ L + G
Sbjct: 436 RGLAP---NEVVYSALIHGLCKARKMDCALEMLAQMKKA-FCTPDTITYNILIDGLCKSG 491

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            +  AR    +M + G + D   + +LI  + K G    +  +FD M       +V +Y 
Sbjct: 492 DVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYG 551

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEG 156
           AL   + +R +   A  YF  M   G
Sbjct: 552 ALISGLCKRRQLTKASLYFQHMKERG 577


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/642 (22%), Positives = 294/642 (45%), Gaps = 11/642 (1%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           +W  + + ++R L+     + V  VL    +   AL+FF W +R   + HD   +  M+E
Sbjct: 159 SWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLE 218

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           +L +      AR +L+ M ++G+    + F  ++ SY + G +++++K+  +M++ GVE 
Sbjct: 219 VLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEP 278

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           ++   +    + +R  R   A R+  +M   GI P   TYN M+ G+    ++E AI   
Sbjct: 279 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 338

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVA 243
           +DM S+G   D V+Y T++    + K++ E   L  +M KE  +    ++Y T+I     
Sbjct: 339 DDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTK 398

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
            + AD+AL    + +    + + V Y+A++  LC  G+M E + ++ EM+ +   P D  
Sbjct: 399 HDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 458

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  ++   C+ G ++ A  +L+ M           Y  L+   C+      A ++++  
Sbjct: 459 TYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMN-- 516

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD-PVAFNNLIR 422
           + +E    P S       +Y+ ++  L   G+  +A    R+++ KG    PV  N L++
Sbjct: 517 MSEEQWWSPNSI------TYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQ 570

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
              ++G    A + ++    +G   +   +  +I  + +  E   A + LD M       
Sbjct: 571 SLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 630

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               + +++++L + GR+  A+ +MK M+ KG+         ++        V++ +  +
Sbjct: 631 DVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAIL 690

Query: 543 D-LMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           + ++++      ++ ++  L   GK   A KLL   L      D  +   +++  L  G 
Sbjct: 691 EKMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGV 750

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            L AY +  ++  +  + D K  +KL   L  EG     ++L
Sbjct: 751 PLLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEGAGNDNNML 792


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 149/648 (22%), Positives = 291/648 (44%), Gaps = 37/648 (5%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           ++ L+P    + +  +     + + AL FF W+ +   F H+ ++H+ M+ IL   G L 
Sbjct: 68  LKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLR 127

Query: 74  HARCILLDMPKK-----------------GVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
            A  + + M K                    + D   F++ +  Y    ++     + D 
Sbjct: 128 IAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDE 187

Query: 117 MKQLGVER-------SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
           MK + +E        ++ + + +     + G  + A+ Y +K++  G+     TY  ++ 
Sbjct: 188 MKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLIL 247

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G+  +  ++ A   F  M ++G   + V+Y  +I+G+   +++DEA KLF++M E N  P
Sbjct: 248 GYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWP 307

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
           TV +YT +I     + R  +AL +F EM     +PN  TYT L+  LC+     + +K+L
Sbjct: 308 TVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKIL 367

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
             M+E+ + P     +  L+   CK G   +A ++L  M   +    A  Y  LI  FC+
Sbjct: 368 NGMLEKGLIPS-VVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCR 426

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
            +   +A+ LL K++E++  L+P         +YN +I   C  G  G A      + + 
Sbjct: 427 GKNIHKAMSLLHKMLERK--LQPN------VVTYNILIHGQCKEGDLGSAYKLLSLMNES 478

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G++ D   ++  I    K G  + A  + + +  +G+  +   Y  LI+ Y + G+ +D 
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           +  LD M+  G  P S  + S+++   ++   + A  ++  M+++ ++   D    +++ 
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           LL     ++A    D M+ +GS P+   + + +      G+   A  L+     +  + D
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPD 658

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
              Y   +DA    G    A+ IL ++ E G    + +   LI  L+ 
Sbjct: 659 TMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSN 706



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 168/646 (26%), Positives = 287/646 (44%), Gaps = 56/646 (8%)

Query: 28  NVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           N++HG   A+  + AL+ F  +     +   R T+  +I  L ++G+   A  +  +M +
Sbjct: 279 NLIHGFCEARRVDEALKLFSQMHEDNCWPTVR-TYTVIIFALCQLGRKTEALNMFKEMTE 337

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           K  Q +   + VLI S  +     ++ KI + M + G+  SV +Y+AL     ++G    
Sbjct: 338 KHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSAS 397

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A    + M S    P   TYN ++ GF     +  A+     M  R +  +VVTYN +I+
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIH 457

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G  +   +  A KL + M E  + P   +Y+  I         ++A  +F+ +K   +K 
Sbjct: 458 GQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKA 517

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAAD 323
           N V Y+ L+ G C  GK+ + + +L +M+     P  NS+ +  L+   CK  +   A  
Sbjct: 518 NEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVP--NSITYNSLIDGYCKEKNFKEARL 575

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           ++  MI+  I   A  Y ILI+N  K + +D+A  + D++      L   S  D+    Y
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM------LSTGSHPDVFI--Y 627

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
              I   C +G+   AE+   ++  KG++ D + +   I  + + G+ D AF I+K M  
Sbjct: 628 TAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687

Query: 443 RGVPRDADAYICLIESYLRKGEP---------------------------ADAKTALD-- 473
            G       Y CLI+ +L   +P                            D +  LD  
Sbjct: 688 VGCEPSYYTYSCLIK-HLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLF 746

Query: 474 -SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M E G +P ++ +   +  L + G ++ A R+   M EKG   N D+   +L      
Sbjct: 747 GKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQL 806

Query: 533 GHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDC--IIDLA 587
           G   EA+  +D+M+++  +P+ DS   LL  L ++G    A ++  FC    C    D  
Sbjct: 807 GLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRV--FCSFLQCEYNYDEM 864

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLN 632
            ++ ++D LL  G + +  S LF IME  G     K+   LI G +
Sbjct: 865 VWKVLIDGLLKKGLS-DKCSDLFGIMETQGCQIHPKTYSMLIEGFD 909



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 73/167 (43%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G   + + +   I    K G ++ + ++FD MK+ G   +   Y++L     + G 
Sbjct: 749 MAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGL 808

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           Y  A R+ + M+     P   +  ++L G +     E A R F        + D + +  
Sbjct: 809 YGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKV 868

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +I+G  +    D+   LF  M+ +  +    +Y+ +I+G+  ++  D
Sbjct: 869 LIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/568 (25%), Positives = 250/568 (44%), Gaps = 53/568 (9%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG----IEPTRHTYNVMLWGFF 172
           M +LG   +V SY+ L K      R   A    + M+++G      P   +YN ++ GFF
Sbjct: 157 MSELGCTPNVVSYNTLLKGFCDENRAEEALELLH-MMADGQVRSCPPNLVSYNTVINGFF 215

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
              +++ A   F DM  +GI  +VVTY  +I+G  + + +D AE +F +M +K + P ++
Sbjct: 216 TEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIV 275

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +YT +I GY+++ +  + +R+  EM +  ++P+  TY  LL  LC  GK  E +K+   M
Sbjct: 276 TYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSM 335

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           + + I P D S++  +L      G L+     L  M+   I      + I+   F K  M
Sbjct: 336 IRKGIKP-DVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAM 394

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
              A+ + +K+         Q  L     +Y  +I  LC  G+   AE+ F Q++ +GV 
Sbjct: 395 IGEAMDIFNKM--------RQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVA 446

Query: 412 ---------------------------------LDP--VAFNNLIRGHSKEGNPDSAFEI 436
                                            + P  V FN ++     EG    A  +
Sbjct: 447 PNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRL 506

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           + +M R G   D  +Y  LI  +   G+  +A   LD M+  G  P    + +++     
Sbjct: 507 IDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCR 566

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPN 553
           DGR+  A  V + M+  G+   +     IL  L       EA      M+ SG   S+  
Sbjct: 567 DGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYT 626

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           ++ +L+ LS+      A+K+      +D  +D+ ++  ++ ALL  G+  +A ++   I 
Sbjct: 627 YNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATIS 686

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
             G V D  +   +   L +EG+ ++ D
Sbjct: 687 ANGLVPDVTTYRLIAENLIEEGSLEEFD 714



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/572 (23%), Positives = 247/572 (43%), Gaps = 52/572 (9%)

Query: 13  KIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           ++R+  P    +N V N        + A   F  +   G+   +  T+  +I+ L +   
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGI-PPNVVTYTIVIDGLCKAQV 254

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           ++ A  +   M  KGV+ +   +  LI  Y   G  +E V++   M   G+E    +Y  
Sbjct: 255 VDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGL 314

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L   + ++G+   A++ F+ M+ +GI+P    Y ++L G+     L     F + M   G
Sbjct: 315 LLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNG 374

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           IS +   +N +   + +   + EA  +F +M+++ + P V++Y T+I     + R DDA 
Sbjct: 375 ISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAE 434

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
             F++M +  V PN V +T+L+ GLC   K  +  ++  EMV + I P  N VF   +  
Sbjct: 435 LKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHP--NVVFFNTIMC 492

Query: 312 Q-CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             C  G +  A  ++  M R+    +   Y  LI   C     D A KLLD ++   + L
Sbjct: 493 NLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIML--SVGL 550

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--------------- 415
           +P         +YN ++   C +G+   A   F++++  G+   V               
Sbjct: 551 KPNE------CTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRR 604

Query: 416 ---------------------AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
                                 +N ++ G SK    D A ++ + +  + +  D   +  
Sbjct: 605 FSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNI 664

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I + L+ G   DA     ++  +G  P  + +R + E+L E+G ++    +   M + G
Sbjct: 665 MIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724

Query: 515 VKENLDLVAKILEALLMRGHVEEA---LGRID 543
              N  ++  ++  LL+RG +  A   L +ID
Sbjct: 725 CAPNSLMLNFLVRRLLLRGDISRAGAYLSKID 756



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/591 (21%), Positives = 245/591 (41%), Gaps = 66/591 (11%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+++ A  + LDM  +G+  +   + ++I+   K  +V  +  +F  M   GV  ++ +Y
Sbjct: 218 GQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTY 277

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             L    L  G++    R   +M + G+EP   TY ++L       K   A + F+ M  
Sbjct: 278 TCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIR 337

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +GI  DV  Y  +++GY     + E       M    I P    +  +   +       +
Sbjct: 338 KGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGE 397

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A+ IF++M+   + PN V Y  L+  LC  G++ + +    +M+   + P +  VF  L+
Sbjct: 398 AMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAP-NIVVFTSLV 456

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
                                         YG+     C  + +++A +L  ++V + I 
Sbjct: 457 ------------------------------YGL-----CTIDKWEKAGELFFEMVNQGI- 480

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
             P          +N ++ +LC  G+  KA+     + + G   D +++N LIRGH   G
Sbjct: 481 -HPNVVF------FNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVG 533

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             D A +++ IM   G+  +   Y  L+  Y R G   DA +    M+ +G +P    + 
Sbjct: 534 KTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYN 593

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           +++  LF+  R   A  +  +M+  G + ++     IL  L     V+EAL     +   
Sbjct: 594 TILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSK 653

Query: 549 G---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
                +  F+ ++  L + G+   A+ L         + D+ +Y  + + L+  G +L  
Sbjct: 654 DLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEG-SLEE 712

Query: 606 YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR--MIRGEMSRG 654
           +  +F  MEK G                  N+   + L R  ++RG++SR 
Sbjct: 713 FDGMFSEMEKSGCAP---------------NSLMLNFLVRRLLLRGDISRA 748



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/484 (21%), Positives = 216/484 (44%), Gaps = 29/484 (5%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I     +G+      +L +M   G++ D   + +L++   KKG   E+ K+FD M
Sbjct: 276 TYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSM 335

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G++  V  Y  +      +G       + + M+  GI P  + +N++   F     +
Sbjct: 336 IRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMI 395

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+  F  M+ +G+S +VV Y T+I+   +  ++D+AE  F +M  + + P ++ +T++
Sbjct: 396 GEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSL 455

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G   +++ + A  +F EM +  + PN V +  ++  LC  G++++ Q+++ +++ER  
Sbjct: 456 VYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLI-DLMERVG 514

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D   +  L+   C  G  + A+ +L  M+ + +      Y  L+  +C+    D A 
Sbjct: 515 TRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAY 574

Query: 358 KLLDKLVEKEI--ILRPQST------------------LDMEAS-------SYNPMIQHL 390
            +  +++   I  ++   +T                  L+M  S       +YN ++  L
Sbjct: 575 SVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGL 634

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
             N    +A   F+ L  K + +D + FN +I    K+G  + A  +   +   G+  D 
Sbjct: 635 SKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDV 694

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  + E+ + +G   +       M + G +P S +   ++  L   G +  A   +  
Sbjct: 695 TTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSK 754

Query: 510 MVEK 513
           + EK
Sbjct: 755 IDEK 758



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 220/488 (45%), Gaps = 18/488 (3%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F + L+ + L        A + F  + R G+   D   +  ++      G L+     L 
Sbjct: 310 FTYGLLLDYLCKKGKCTEARKLFDSMIRKGI-KPDVSIYGIILHGYATKGALSEMHSFLD 368

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G+  +  +F ++  ++ KK ++ E++ IF+ M+Q G+  +V +Y  L   + + G
Sbjct: 369 LMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLG 428

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A+  FN+M++EG+ P    +  +++G     K E A   F +M ++GI  +VV +N
Sbjct: 429 RVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFN 488

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T++       ++ +A++L   M+     P +ISY  +I+G+  V + D+A ++ D M S 
Sbjct: 489 TIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSV 548

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP---KDNSVFMKLLGVQCKSGH 317
            +KPN  TY  LL G C  G++ +   V +EM+   I P     N++   L     K+  
Sbjct: 549 GLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLF----KTRR 604

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
            + A ++   MI          Y I++    K    D A+K+   L  K+        L 
Sbjct: 605 FSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKD--------LQ 656

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGH-SKEGNPDSAFEI 436
           ++  ++N MI  L  +G+   A   F  +   G++  V    LI  +  +EG+ +    +
Sbjct: 657 VDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGM 716

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M + G   ++     L+   L +G+ + A   L  + E   S  +S   S++ SLF 
Sbjct: 717 FSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEAST-TSMLISLFS 775

Query: 497 DGRVQTAS 504
               Q  S
Sbjct: 776 REEHQAKS 783



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 123/518 (23%), Positives = 229/518 (44%), Gaps = 57/518 (11%)

Query: 149 FNKMLSEG---IEPTRHTYNVMLWGFFLSLKLETAIRFFE-DMKSRGISLDVVTYNTMIN 204
           FN+M+ +    + P   TY++++  F    +LE     F   +K+     DVV  N ++ 
Sbjct: 79  FNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLK 138

Query: 205 GYNRFKKMDEAEK-LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           G    K++ EA   L   M E    P V+SY T++KG+    RA++AL +   M    V+
Sbjct: 139 GLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVR 198

Query: 264 ---PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              PN V+Y  ++ G    G++ +   +  +M ++ IPP   +  + + G+ CK+  ++ 
Sbjct: 199 SCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGL-CKAQVVDR 257

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  V + MI   +      Y  LI  +     +   +++L ++            L+ + 
Sbjct: 258 AEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM--------SAHGLEPDC 309

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI-RGHSKEG----------- 428
            +Y  ++ +LC  G+  +A   F  +++KG+   V+   +I  G++ +G           
Sbjct: 310 FTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDL 369

Query: 429 ------NPD------------------SAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
                 +P+                   A +I   M ++G+  +   Y  LI++  + G 
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             DA+   + MI +G +P   +F S++  L    + + A  +   MV +G+  N+     
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           I+  L   G V +A   IDLM + G+ P+   +++L+      GKT  A KLLD  L   
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG 549

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
              +  +Y  +L      G+  +AYS+ F+ M   G+T
Sbjct: 550 LKPNECTYNTLLHGYCRDGRIDDAYSV-FQEMLSNGIT 586



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 87/440 (19%), Positives = 170/440 (38%), Gaps = 68/440 (15%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE----------VQKVLREMVERYI 297
           DDAL++FDE        + + +  LL  +  A +               +++R+   +  
Sbjct: 32  DDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSKVA 91

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRA 356
           P  D   +  L+G  C+ G L         +++      +      L++  C A+    A
Sbjct: 92  P--DVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 357 IKLLDKLVEKEIILRPQSTLDMEAS--SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-- 412
           + +L         LR  S L    +  SYN +++  C   +  +A +    +M  G +  
Sbjct: 150 MGVL---------LRRMSELGCTPNVVSYNTLLKGFCDENRAEEA-LELLHMMADGQVRS 199

Query: 413 ---DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA-------------------- 449
              + V++N +I G   EG  D A+ +   M  +G+P +                     
Sbjct: 200 CPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAE 259

Query: 450 ---------------DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
                            Y CLI  YL  G+  +    L  M   G  P    +  +++ L
Sbjct: 260 GVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYL 319

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            + G+   A ++  SM+ KG+K ++ +   IL     +G + E    +DLM+ +G  PN 
Sbjct: 320 CKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNH 379

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             F+ +    ++K     A+ + +    +    ++ +Y  ++DAL   G+  +A     +
Sbjct: 380 YIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQ 439

Query: 612 IMEKGGVTDWKSSDKLIAGL 631
           ++ +G   +      L+ GL
Sbjct: 440 MINEGVAPNIVVFTSLVYGL 459


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 155/648 (23%), Positives = 290/648 (44%), Gaps = 38/648 (5%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL-- 66
           R+  + RA         V ++L  A     AL+ F    R     H  E+   M+E++  
Sbjct: 61  RVHERRRAAGAGTGTESVVHMLRSAPGPAEALELFTAAARQPTAVHTTESCNYMLELMRA 120

Query: 67  -GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            GRVG +     +   M K+ V+ +   F  +    G +G ++ +     +M++ G+  +
Sbjct: 121 HGRVGDMAQ---VFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLN 177

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y+ L   +++ G    A   +  M+ +GI P+  TY+V++  F     ++T +    
Sbjct: 178 GYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLN 237

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M++RG+  +V +Y   I    +  + DEA ++  +M++   +P V+++T +I+      
Sbjct: 238 EMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAG 297

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV-ERYIPPKDNSV 304
           R  DA  +F +MK+ D KP+ VTY  LL    D+G    V ++   MV + Y    DN V
Sbjct: 298 RLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGY---NDNIV 354

Query: 305 -FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  ++   C+ G L+ A  V   M    I  E   Y  LI  F KA+M+DRA++L +  
Sbjct: 355 SYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNH- 413

Query: 364 VEKEIILRPQSTLDMEASSYNP-------MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
                         M A   +P        I +   +GQ+ KA   +  +  KG++ D  
Sbjct: 414 --------------MNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVA 459

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           A N ++   ++ G    A  +   +   GV  D   Y  +I+   +  +  +A      M
Sbjct: 460 AANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM 519

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +E G  P      S++++L++ G+   A ++   + E  ++        +L  L   G V
Sbjct: 520 VETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKV 579

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           +E +  ++ M  S   PN   ++++L  LS+ G+   A+ +L     + C  DL+SY  V
Sbjct: 580 KEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTV 639

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +  L+   +   A+  +F  M+K    D+ +   ++    + G  K+A
Sbjct: 640 MYGLIKEERFEEAFR-MFCQMKKILAPDYATLCTILPSFVKNGLMKEA 686



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 141/617 (22%), Positives = 260/617 (42%), Gaps = 36/617 (5%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           +N +  ++  +++ L +VG+L+ A  +  +M +KG+  ++  +  LI  + K  +   ++
Sbjct: 349 YNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRAL 408

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++F+ M   G   +  ++        + G+ + A + +  M S+GI P     N +L   
Sbjct: 409 ELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSL 468

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             S +L  A R F ++K  G+S D +TY  MI   ++  K DEA   F++M E    P V
Sbjct: 469 ARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDV 528

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++  ++I       + ++A ++F ++K   ++P   TY  LL GL   GK+ EV  +L E
Sbjct: 529 LALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEE 588

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M     PP +   +  +L    K+G +N A  +L +M       +   Y  ++    K E
Sbjct: 589 MTHSIHPP-NLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEE 647

Query: 352 MYDRAIKLLDKL-----------------------------VEKEIILRPQSTLDMEASS 382
            ++ A ++  ++                               KE IL+     D   SS
Sbjct: 648 RFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTD--KSS 705

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           ++ +++ + +     K+  F   +  +G+L +      LIR   K      A ++     
Sbjct: 706 FHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFK 765

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
             GV     +Y  LI   + +     A+     M   G  P    +  +++++ +  R++
Sbjct: 766 GLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIE 825

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
              RV   M  KG +        I+  L+    +E+A+     +M  G  P    +  LL
Sbjct: 826 EMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLL 885

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
             L + GK + A  L +  L   C  +   Y  +L+    AG T N   I  K++E+G  
Sbjct: 886 DGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGIN 945

Query: 619 TDWKSSDKLIAGLNQEG 635
            D KS   LI  L   G
Sbjct: 946 PDIKSYTVLIDTLCTAG 962



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 176/355 (49%), Gaps = 10/355 (2%)

Query: 81   DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            ++  +G+  ++     LI    K     E+ ++F+  K LGV     SY++L + ++   
Sbjct: 728  NIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDEN 787

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               +A+  F +M   G  P   TYN++L     S+++E  +R   +M  +G     VTYN
Sbjct: 788  LIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYN 847

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            T+I+G  + K++++A  L+  +  +   PT  +Y  ++ G +   +  DA  +F+EM  +
Sbjct: 848  TIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEY 907

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              KPN   Y  LL G   AG    V ++  +MVE+ I P D   +  L+   C +G LN 
Sbjct: 908  GCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINP-DIKSYTVLIDTLCTAGRLND 966

Query: 321  AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
                 + ++ L +  +   Y +LI+   K+E  + A+ L +++ +K I+  P        
Sbjct: 967  GLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIV--PN------L 1018

Query: 381  SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
             +YN +I HL   G+  +A   + +L+ KG    V  +N LIRG+S  G+ D+A+
Sbjct: 1019 YTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAY 1073



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 148/683 (21%), Positives = 289/683 (42%), Gaps = 56/683 (8%)

Query: 1    MAERAWTTRLQNKIRALVPQ---FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE 57
            M +RA    L N + A  P    + H L  N    +  S  A+Q +  ++  G+   D  
Sbjct: 403  MFDRAL--ELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIV-PDVA 459

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
                ++  L R G+L  A+ +  ++   GV  D   + ++I+   K     E++  F  M
Sbjct: 460  AANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM 519

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
             + G    V + ++L   + + G+   A + F+++    IEPT  TYN +L G     K+
Sbjct: 520  VETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKV 579

Query: 178  ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            +  +   E+M       +++TYNT+++  ++  +++ A  +   M EK   P + SY T+
Sbjct: 580  KEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTV 639

Query: 238  IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
            + G +  ER ++A R+F +MK   + P+  T   +LP     G M E    ++E + +  
Sbjct: 640  MYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAD 698

Query: 298  PPKDNSVFMKLL-GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
               D S F  L+ G+  K+G +  + +  + +    I         LI + CK +    A
Sbjct: 699  CNTDKSSFHSLMEGILNKAG-VEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEA 757

Query: 357  IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG------ 410
             +L +K     + L+          SYN +I+ L        AE  F ++ + G      
Sbjct: 758  HQLFNKFKGLGVSLK--------TGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEF 809

Query: 411  ----VLDP--------------------------VAFNNLIRGHSKEGNPDSAFEIVKIM 440
                +LD                           V +N +I G  K    + A ++   +
Sbjct: 810  TYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNL 869

Query: 441  GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
               G       Y  L++  L+ G+  DA+   + M+E G  P  +++  ++      G  
Sbjct: 870  MSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNT 929

Query: 501  QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
            +   ++ + MVE+G+  ++     +++ L   G + + L     +++ G  P+   ++ L
Sbjct: 930  ENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLL 989

Query: 558  LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
            +  L +  +   AV L +    +  + +L +Y  ++  L  AGK   A  +  +++ KG 
Sbjct: 990  IDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGW 1049

Query: 618  VTDWKSSDKLIAGLNQEGNTKQA 640
              +  + + LI G +  G+T  A
Sbjct: 1050 KPNVFTYNALIRGYSVSGSTDNA 1072



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 122/566 (21%), Positives = 233/566 (41%), Gaps = 56/566 (9%)

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            T+  +++ L + G++N A  +L  M +KG   D   +  ++    K+   +E+ ++F  M
Sbjct: 600  TYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM 659

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK-MLSEGIEPTRHTYNVMLWGFFLSLK 176
            K++ +     +   +    ++ G    A     + +L       + +++ ++ G      
Sbjct: 660  KKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAG 718

Query: 177  LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
            +E +I F E++ SRGI L+      +I    + KK  EA +LF + K   +     SY +
Sbjct: 719  VEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNS 778

Query: 237  MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
            +I+G V     D A  +F EMK     P+  TY  +L  +   GK + ++++LR   E  
Sbjct: 779  LIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAM---GKSMRIEEMLRVQAE-- 833

Query: 297  IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
                                           M R    +    Y  +I    K++  ++A
Sbjct: 834  -------------------------------MHRKGYESTYVTYNTIISGLVKSKRLEQA 862

Query: 357  IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
            I L   L+ +     P         +Y P++  L   G+   AE  F ++++ G   +  
Sbjct: 863  IDLYYNLMSEGFSPTP--------CTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCT 914

Query: 416  AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
             +N L+ GH   GN ++  +I + M  +G+  D  +Y  LI++    G   D  +    +
Sbjct: 915  IYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQL 974

Query: 476  IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            +E G  P   ++  +++ L +  R++ A  +   M +KG+  NL     ++  L   G  
Sbjct: 975  LELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKA 1034

Query: 536  EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
             EA    + ++  G  PN   +++L+   S  G T  A          DC+    S +  
Sbjct: 1035 SEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYA------AYDCVAVGVSLKTA 1088

Query: 593  LDALLAAGKTLNAYSILFKIMEKGGV 618
            L + L     +N    LF  M++ G 
Sbjct: 1089 LISGLVDENLINIAEGLFAEMKRRGC 1114



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 6/277 (2%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N + + L  +K  E A+  +  +   G F+    T+  +++ L + GK+  A  +  +M
Sbjct: 846  YNTIISGLVKSKRLEQAIDLYYNLMSEG-FSPTPCTYGPLLDGLLKAGKMVDAENLFNEM 904

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + G + +  ++ +L+  +   G  +   +IF+ M + G+   +KSY  L   +   GR 
Sbjct: 905  LEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRL 964

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 YF ++L  G+EP    YN+++ G   S ++E A+  F +MK +GI  ++ TYN++
Sbjct: 965  NDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSL 1024

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I    +  K  EA +++ E+  K  +P V +Y  +I+GY      D+A   +D      V
Sbjct: 1025 ILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYD-----CV 1079

Query: 263  KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
                   TAL+ GL D   +   + +  EM  R   P
Sbjct: 1080 AVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGP 1116



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 123/235 (52%), Gaps = 6/235 (2%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N++ N    A N+E+  Q F  +   G+ N D +++  +I+ L   G+LN        +
Sbjct: 916  YNILLNGHRIAGNTENVCQIFEKMVEQGI-NPDIKSYTVLIDTLCTAGRLNDGLSYFRQL 974

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + G++ D  ++ +LI+  GK   ++E+V +F+ MK+ G+  ++ +Y++L   + + G+ 
Sbjct: 975  LELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKA 1034

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A + + ++L +G +P   TYN ++ G+ +S   + A   + D  + G+SL       +
Sbjct: 1035 SEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAY-DCVAVGVSLKTA----L 1089

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            I+G      ++ AE LFAEMK +   P   +Y  ++       R ++ L++ +E+
Sbjct: 1090 ISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEI 1144


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/521 (24%), Positives = 244/521 (46%), Gaps = 21/521 (4%)

Query: 94  FEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           + ++++S  + G    +++IF   M + GV  ++ +Y+ +   + +          F ++
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G  P   TYN ++     +  LE A R   DM SRG   +VVTY+ +ING  +  ++
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 213 DEAEKLFAEMKEKNIE--PTVISYTTMIKGYVAVERADDALRIFDEMK--SFDVKPNAVT 268
           DEA +L  EM  K+ +  P +I+Y + + G        +A  +   ++  S  V P+ VT
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           ++ L+ GLC  G++ E   V  +M+   Y+P  +   +  L+   CK+  +  A  ++++
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVP--NVITYNALVNGLCKADKMERAHAMIES 241

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLDMEASSYN 384
           M+   +  +   Y +L++ FCKA   D A++LL  +  +     +L P         ++N
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKV------TFN 295

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I   C  G   +A   F +++ K +  D + F  LI G  K G  ++A +I+ +MG  
Sbjct: 296 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 355

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           GVP +   Y  L+    + G   +A   L+ M+  G  P S  + S++ +L    R   A
Sbjct: 356 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 415

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
            +++  +   G   +      +++ L   G  E+A+  ++ M+  G  P+   F +  S 
Sbjct: 416 LQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSG 475

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           L   G     ++LL   L +  + D  +   +LD +  +GK
Sbjct: 476 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGK 516



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 238/525 (45%), Gaps = 25/525 (4%)

Query: 126 VKSYDALFKLILRRGRYMMAKRYF-NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           V  Y+ + + + R G    A   F  +M  +G+ PT  TYN ++ G   S  L   +  F
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           E++  RG   DVVTYNT+I+   +   ++EA +L  +M  +   P V++Y+ +I G   V
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 245 ERADDALRIFDEM--KSFDVKPNAVTYTALLPGLCD---AGKMVEVQKVLREMVERYIPP 299
            R D+A  +  EM  KS DV PN +TY + L GLC      +  E+ + LR+   R  P 
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP- 179

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D   F  L+   CK G ++ A  V   MI          Y  L+   CKA+  +RA  +
Sbjct: 180 -DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG------VLD 413
           ++ +V+K +   P      +  +Y+ ++   C   +  +A      +  +G      V D
Sbjct: 239 IESMVDKGVT--P------DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPD 290

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V FN LI G  K GN + A  + + M  + +  D   +  LI+   + G+   A+  LD
Sbjct: 291 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD 350

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M   G  P    + +++  L + GR++ A + ++ MV  G   +      ++ AL    
Sbjct: 351 LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRAS 410

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
             ++AL  +  +   G  P+   ++ L+  L + GKT  A+ +L+  +G+    D  ++ 
Sbjct: 411 RTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFA 470

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
                L  +G       +L  ++ KG + D  +   ++  + + G
Sbjct: 471 ACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSG 515



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/526 (23%), Positives = 238/526 (45%), Gaps = 19/526 (3%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRW-VERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           D+N+V   L  A ++  AL+ FR  + R G+      T+  +I  L +   L     +  
Sbjct: 3   DYNIVLQSLCRAGDTARALEIFRGEMARDGV-APTIVTYNTIINGLCKSNDLGAGMELFE 61

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           ++ ++G   D   +  LI+S  K G ++E+ ++   M   G   +V +Y  L   + + G
Sbjct: 62  ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG 121

Query: 141 RYMMAKRYFNKMLSEGIE--PTRHTYNVMLWGFFLSLKLETAIRFFEDMK--SRGISLDV 196
           R   A+    +M  +  +  P   TYN  L G         A      ++  S  +S D 
Sbjct: 122 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 181

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VT++T+I+G  +  ++DEA  +F +M      P VI+Y  ++ G    ++ + A  + + 
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK----DNSVFMKLLGVQ 312
           M    V P+ +TY+ L+   C A ++ E  ++L  M  R   P     D   F  L+   
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           CK+G+   A+ + + M+  ++  +   +G LI+  CKA   + A  +LD +    +   P
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV---P 358

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPD 431
            + +     +YN ++  LC +G+  +A  F  +++  G V D + + +L+    +    D
Sbjct: 359 PNVV-----TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 413

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A ++V  +   G   D   Y  L++   + G+   A T L+ M+  GH P S  F +  
Sbjct: 414 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACF 473

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
             L   G +     +++ ++ KG+  +    + IL+ +   G +++
Sbjct: 474 SGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 224/489 (45%), Gaps = 27/489 (5%)

Query: 164 YNVMLWGFFLSLKLETAIRFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           YN++L     +     A+  F  +M   G++  +VTYNT+ING  +   +    +LF E+
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
            E+   P V++Y T+I         ++A R+  +M S    PN VTY+ L+ GLC  G++
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 283 VEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAM--IRLSIPTEAGH 339
            E +++++EM  +      N + +   L   CK      A ++++++    L +  +   
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           +  LI+  CK    D A  + D ++    +  P         +YN ++  LC   +  +A
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYV--PNVI------TYNALVNGLCKADKMERA 235

Query: 400 EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG------VPRDADAY 452
                 ++ KGV  D + ++ L+    K    D A E++  M  RG      VP D   +
Sbjct: 236 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVP-DKVTF 294

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI    + G    A    + M+     P    F ++++ L + G+V+ A  ++  M  
Sbjct: 295 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 354

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            GV  N+     ++  L   G +EEA   ++ M+ SG VP+   + SL+  L    +T  
Sbjct: 355 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 414

Query: 570 AVKLLDF--CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
           A++L+      G D   D  +Y  ++D L  +GKT  A ++L +++ KG   D  +    
Sbjct: 415 ALQLVSELKSFGWD--PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 472

Query: 628 IAGLNQEGN 636
            +GL++ GN
Sbjct: 473 FSGLHRSGN 481



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 152/319 (47%), Gaps = 12/319 (3%)

Query: 18  VPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           VP    +N + N L  A   E A      +   G+   D  T+  +++   +  +++ A 
Sbjct: 213 VPNVITYNALVNGLCKADKMERAHAMIESMVDKGV-TPDVITYSVLVDAFCKASRVDEAL 271

Query: 77  CILLDMPKKGVQW-----DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
            +L  M  +G        D+  F +LI    K G  +++  +F+ M    ++  V ++ A
Sbjct: 272 ELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 331

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L   + + G+   A+   + M + G+ P   TYN ++ G   S ++E A +F E+M S G
Sbjct: 332 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 391

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
              D +TY +++    R  + D+A +L +E+K    +P  ++Y  ++ G     + + A+
Sbjct: 392 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAI 451

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            + +EM     +P++ T+ A   GL  +G +    ++LR ++ + + P D +    +L  
Sbjct: 452 TVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLP-DATTCSSILDW 510

Query: 312 QCKSGHLNAAADVLKAMIR 330
            C+SG L    D +KAMI+
Sbjct: 511 VCRSGKL----DDVKAMIK 525



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 108/275 (39%), Gaps = 39/275 (14%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNH----DRETHLKMIEILGRVGKLNHARCI 78
           ++++ +    A   + AL+    +   G   +    D+ T   +I    + G    A  +
Sbjct: 254 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASAL 313

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
             +M  K +Q D   F  LI+   K G V+ +  I D+M  LGV  +V +Y+AL   + +
Sbjct: 314 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 373

Query: 139 RGRYMMAKRYFNKMLSEGI-----------------------------------EPTRHT 163
            GR   A ++  +M+S G                                    +P   T
Sbjct: 374 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 433

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
           YN+++ G + S K E AI   E+M  +G   D  T+    +G +R   +    +L   + 
Sbjct: 434 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVL 493

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
            K + P   + ++++       + DD   +  E +
Sbjct: 494 AKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 238/519 (45%), Gaps = 17/519 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           HN+V   L  A    HAL  +R +  A     D  T+ K++  L +  +L  A  +L +M
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQMNDA--HPPDFLTYTKLVHGLSKARRLRDAVQVLQEM 65

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
                  D     V+++S      V ++ ++ + M   G+  +  +Y AL   + +  R 
Sbjct: 66  VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 125

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A      M   G  PT  TYN ++ GF  + +++ A  F E M + G   D++TY  +
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTAL 185

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G+ + + +    +L  E+  +   P +++Y+T+I G     R  DA+ IF+EM     
Sbjct: 186 IGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC--- 242

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P A+TY +L+ G C AG M E  ++L +MV+    P D   +  L+   CK G L+ A 
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAP-DVVTYTTLMSAFCKMGRLDDAY 301

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++ + M+   +  +   +  L++  C     + A++LL+++  +     P +       +
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC---PPTIY-----T 353

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN ++   C   Q  KAE        +G V + V +N L+ G  + G  D A + +  + 
Sbjct: 354 YNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLN 413

Query: 442 RRG--VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
             G   P     Y  ++++  R G   DA    + MI+ G+ PA++ F +V+ +L +  +
Sbjct: 414 SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQ 473

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            Q A  +++ M++ G          ++ A    G +++A
Sbjct: 474 PQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 217/459 (47%), Gaps = 15/459 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +++ L    +++ AR ++ +M  +G+  +   +  L++   K   + E+V + 
Sbjct: 73  DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALV 132

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M + G   +V +Y+++     R  R   A  +  +M++EG  P   TY  ++ GF  S
Sbjct: 133 ETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKS 192

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +   +    ++  RG + D+VTY+T+I+G  +  ++ +A  +F EM   +  PT I+Y
Sbjct: 193 RDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITY 249

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            ++I GY      D+A+R+  +M      P+ VTYT L+   C  G++ +  ++ ++MV 
Sbjct: 250 NSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVA 309

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D   F  L+   C  G +  A ++L+ + R   P     Y  +++ +CKA    
Sbjct: 310 NKLSP-DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVR 368

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
           +A +L+     +  +  P +       +YN ++   C  G+T +A  +  QL  +G   P
Sbjct: 369 KAEELVADFRSRGFV--PNTV------TYNILVAGCCRAGRTDQALQYLDQLNSEGGPCP 420

Query: 415 VA---FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            +   +  ++    ++G  D A +  + M +RG    A  +  ++ +  +  +P  A   
Sbjct: 421 TSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHEL 480

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           L+ MI+ GH+P      +V+ +    G +Q A  +   +
Sbjct: 481 LEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/498 (22%), Positives = 226/498 (45%), Gaps = 18/498 (3%)

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P    +NV++ G   + +L  A+  +  M       D +TY  +++G ++ +++ +A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           ++  EM      P   + T +++     +R DDA  + +EM    +  NA+TY+AL+ GL
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   ++ E   ++  M ER   P   +    + G  C++  ++ A   ++ M+      +
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGF-CRARRVDEAHGFMEQMVAEGCHPD 178

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI  FCK+    R ++LL ++  +        T D+   +Y+ +I  LC  G+ 
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGF------TPDI--VTYSTVIDGLCKAGRL 230

Query: 397 GKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
             A   F ++        + +N+LI G+ + G+ D A  ++  M       D   Y  L+
Sbjct: 231 RDAVDIFEEM--SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLM 288

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
            ++ + G   DA      M+ +  SP    F S+++ L  +GR++ A  +++ +  +G  
Sbjct: 289 SAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 348

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
             +     +++       V +A   +      G VPN   ++ L++     G+T  A++ 
Sbjct: 349 PTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 408

Query: 574 LD--FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           LD     G  C   +A Y  +LDAL   G+T +A     +++++G V    +   ++  L
Sbjct: 409 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 468

Query: 632 NQEGNTKQA-DILSRMIR 648
            +    +QA ++L  MI+
Sbjct: 469 CKAHQPQQAHELLEEMIK 486



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 99/219 (45%), Gaps = 8/219 (3%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           A   + D  T   +++ L   G++  A  +L ++ ++G       +  +++ Y K   V+
Sbjct: 309 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVR 368

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE-PTR-HTYNV 166
           ++ ++    +  G   +  +Y+ L     R GR   A +Y +++ SEG   PT    Y +
Sbjct: 369 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 428

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           +L       + + A++F+E+M  RG      T+ T++    +  +  +A +L  EM +  
Sbjct: 429 ILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG 488

Query: 227 IEPTVISYTTMIKGYV---AVERADD---ALRIFDEMKS 259
             P   +   ++  Y     +++AD+    LR++ +  S
Sbjct: 489 HTPGPGTCDAVVSAYCRAGMIQKADELASELRLYTDKSS 527


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 253/562 (45%), Gaps = 52/562 (9%)

Query: 23  HNLVYN-VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           +N V N +L   +  + A   F  +   GL + D  T+  +I  L +   ++ A  +L+ 
Sbjct: 205 YNTVINGLLREGRQLDTAYHLFDQMLDQGL-SPDVVTYNSIISALSKARAMDKAAVVLVR 263

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K G   +      L+  Y   G   +++ +F  M + GVE  V +Y+ L   + + GR
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGR 323

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            M A++ F+ M+  G +P   TY  +L G+     L       + M   GI  D   +N 
Sbjct: 324 SMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNI 383

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I  Y +  K+D+A  LF++M+ + + P  ++Y  ++     V + DDA+  F  + S  
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG 443

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P+AV +  L+ GLC   K  + +++  EM+ R I P +N  F  LL   CK G +  A
Sbjct: 444 LTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICP-NNIFFNTLLNHLCKEGMVARA 502

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            ++   M+R+ +  +   Y  LI+ +C     D A KLL+ +V   +  +P         
Sbjct: 503 KNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGV--KPNEV------ 554

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKI 439
           +YN MI   C NG+   A   FRQ+  KGV +P  V ++ +++G  +     +A E+   
Sbjct: 555 TYNTMINGYCKNGRIEDAFSLFRQMASKGV-NPGIVTYSTILQGLFQARRTAAAKELYLW 613

Query: 440 MGRRGVPRDADAY------IC-----------------------------LIESYLRKGE 464
           M + G+  D   Y      +C                             +I++ L+ G 
Sbjct: 614 MIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGR 673

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +AK    S++  G  P    +  +M+SL E G ++    +  S+ + G   N  ++  
Sbjct: 674 HDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNA 733

Query: 525 ILEALLMRGHVEEA---LGRID 543
           ++  LL +G V +A   L +ID
Sbjct: 734 LVGKLLQKGEVRKAGVYLSKID 755



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 126/564 (22%), Positives = 232/564 (41%), Gaps = 87/564 (15%)

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM-----KSRGISLDVVTYNTMING 205
           +M   G  P   +Y ++L G     + + A+     M        G   DVV+YNT+ING
Sbjct: 152 RMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVING 211

Query: 206 YNR-FKKMDEAEKLFAEMKEKNIEPTVISYTTMIK------------------------- 239
             R  +++D A  LF +M ++ + P V++Y ++I                          
Sbjct: 212 LLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMP 271

Query: 240 ----------GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
                     GY +  + +DA+ +F  M    V+P+  TY  L+  LC  G+ +E +K+ 
Sbjct: 272 NRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIF 331

Query: 290 REMVERYIPPK----------------------------------DNSVFMKLLGVQCKS 315
             MV+R   P                                   D+ +F  L+G   K 
Sbjct: 332 DSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKH 391

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G ++ A  +   M R  +  +   YGI+++  C     D A+    +L+ +         
Sbjct: 392 GKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE--------G 443

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
           L  +A  +  +I  LC   +  KAE    +++ +G+  + + FN L+    KEG    A 
Sbjct: 444 LTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAK 503

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            I  +M R  V RD   Y  LI+ Y   G+  +A   L+ M+ DG  P    + +++   
Sbjct: 504 NIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGY 563

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SV 551
            ++GR++ A  + + M  KGV   +   + IL+ L        A      M++SG    +
Sbjct: 564 CKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDI 623

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++ +L  L +   T  A+++       D  ++  ++  ++DALL  G+   A  +   
Sbjct: 624 GTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFAS 683

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEG 635
           ++ +G V +  +   ++  L ++G
Sbjct: 684 LLARGLVPNVVTYWLMMKSLIEQG 707



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 103/488 (21%), Positives = 205/488 (42%), Gaps = 37/488 (7%)

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI- 253
           +++TY+ +I+  +R   +D A      +         I+++ ++K     +R  +A+ I 
Sbjct: 90  NLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIA 149

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV-----ERYIPPKDNSVFMKL 308
              M      PN  +YT LL GLCD  +  +   +L  M+         PP   S    +
Sbjct: 150 LRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVI 209

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
            G+  +   L+ A  +   M+   +  +   Y  +I    KA   D+A  +L ++V+   
Sbjct: 210 NGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGA 269

Query: 369 IL----------------RPQSTLDM-----------EASSYNPMIQHLCHNGQTGKAEI 401
           +                 +P   + +           +  +YN ++ +LC NG++ +A  
Sbjct: 270 MPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARK 329

Query: 402 FFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F  ++K+G   +   +  L+ G++ EG+      ++ +M R G+  D   +  LI +Y 
Sbjct: 330 IFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYT 389

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           + G+  DA      M   G +P +  +  VM++L   G+V  A      ++ +G+  +  
Sbjct: 390 KHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAV 449

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
           +   ++  L  R   ++A      M+  G  PN   F++LL+ L ++G    A  + D  
Sbjct: 450 VFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLM 509

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
           +  D   D+ +Y  ++D     GK   A  +L  ++  G   +  + + +I G  + G  
Sbjct: 510 VRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRI 569

Query: 638 KQADILSR 645
           + A  L R
Sbjct: 570 EDAFSLFR 577



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 160/376 (42%), Gaps = 10/376 (2%)

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V PN +TY+ ++      G +      L  ++ R     +   F  LL   C     + A
Sbjct: 87  VPPNLITYSVVIDCCSRVGHLDLAFAALGRVI-RSGWTAEAITFSPLLKALCDKKRTSEA 145

Query: 322 ADV-LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
            D+ L+ M  L        Y IL++  C      +A+ LL  ++  +     +     + 
Sbjct: 146 MDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVAD---DTRGGYPPDV 202

Query: 381 SSYNPMIQHLCHNG-QTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
            SYN +I  L   G Q   A   F Q++ +G+  D V +N++I   SK    D A  ++ 
Sbjct: 203 VSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLV 262

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M + G   +   +  L+  Y   G+P DA      M  DG  P    + ++M  L ++G
Sbjct: 263 RMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNG 322

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           R   A ++  SMV++G K N      +L      G + +    +D+M+++G  P+   F+
Sbjct: 323 RSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFN 382

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            L+   ++ GK   A+ L      +    D  +Y  V+DAL   GK  +A +   +++ +
Sbjct: 383 ILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE 442

Query: 616 GGVTDWKSSDKLIAGL 631
           G   D      LI GL
Sbjct: 443 GLTPDAVVFRNLIHGL 458


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 145/613 (23%), Positives = 266/613 (43%), Gaps = 44/613 (7%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A  +FR +  +  F H + T+  MIE LGR   ++  + +L  M  +G+   ED+F  +I
Sbjct: 62  ASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVI 121

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            +Y + G+ ++++K+F  +++ G + +VK Y+ L   +L   R+ M +  ++ M  +G E
Sbjct: 122 NTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKE 181

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT-------------------- 198
           P  +TYN++L     + +++ A +   +M ++G   DVV+                    
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL 241

Query: 199 ----------YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
                     YN +ING+ R  K+ E   L  +M EK I+P VI+Y+T+I     +   +
Sbjct: 242 SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            AL ++ +M      PN  T+T+L+ G    G+++E   +   M E    P +   +  L
Sbjct: 302 LALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEP-NVVAYNTL 360

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   C  G +  A  V   M R         YG LI+ F KA     A ++ +K++    
Sbjct: 361 IHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGC 420

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           I  P   +      Y  M+  LC +    +A     ++       + V FN  I+G    
Sbjct: 421 I--PNVVV------YTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCS 472

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G  + A  +   M + G   +   Y  +++  L++    +A   +  M E G       +
Sbjct: 473 GRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTY 532

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++       G+ + A +++  M+  GVK +      +  A  M+G V+ A+  +D +  
Sbjct: 533 NTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSA 592

Query: 548 SG----SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
            G     V  + SLL  +  +     AV  LD  L     ++ A++  ++  L  +   L
Sbjct: 593 GGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHL 652

Query: 604 NAYSILFKIMEKG 616
               IL  I+  G
Sbjct: 653 GPIHILDDILTSG 665


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 160/645 (24%), Positives = 276/645 (42%), Gaps = 80/645 (12%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+++ A  + L+M   GV  D   +  +I+   K   V  +  +F  M + GV+ +  +Y
Sbjct: 207 GQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTY 263

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + +   + +     MA+  F KM+ +G++P+  TYN ++ G   +  ++ A   F+ M  
Sbjct: 264 NTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMID 323

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           RG+  D VTYNT+I+G  + + +D+AE +F +M +K ++P  ++YT +I G    +  D 
Sbjct: 324 RGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDR 383

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A  +F +M    VKPN  TY  L+ G    G+  EV + ++EM    + P D   +  LL
Sbjct: 384 AEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEP-DVFTYGLLL 442

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK----AEMYDRAIKLLDKLVE 365
              CK+G  N A  +  +MIR  I      YGI++  + K    +EM+D    LL+ +V 
Sbjct: 443 DYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHD----LLNLMVA 498

Query: 366 KEI---------------------------ILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
             I                           I   Q  L     +Y  +I  LC  G+   
Sbjct: 499 NGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDD 558

Query: 399 AEIFFRQLMKKGVL------------------------------------DPVAFNNLIR 422
           A + F Q++ +GV                                     D V FN ++ 
Sbjct: 559 AVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLC 618

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
              KEG    A  ++  M   G+  D  +Y  LI+ +       +A   LD M+  G  P
Sbjct: 619 NLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKP 678

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               + +++    + GR+  A  + + M+ KGV   ++    IL  L   G   EA    
Sbjct: 679 NIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELY 738

Query: 543 DLMMQS---GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             M++S    S+  +  +L    +      A K+       D  +D+ ++  ++D L   
Sbjct: 739 VNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKG 798

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIA-GLNQEGNTKQADIL 643
           G+  +A   LF  +   G+     + +LIA  L +EG+ ++ D L
Sbjct: 799 GRKEDAMD-LFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCL 842



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 216/453 (47%), Gaps = 14/453 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+   G+ G L+    +L  M   G+  +  +F  +I +Y K+ ++ E + IF  MKQ G
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V +Y  L   + + GR   A   FN+M++EG+ P    +N +++G     K E   
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVE 595

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F +M ++GI  D+V +NT++    +  ++ EA +L   M    ++P VISY T+I G+
Sbjct: 596 ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGH 655

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R D+A+++ D M S  +KPN V+Y  LL G C AG++     + REM+ + + P  
Sbjct: 656 CFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + +  +L    +SG  + A ++   MI+         Y I+++ FCK   +D A K+  
Sbjct: 716 ET-YNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQ 774

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
            L   +        L ++  ++N MI  L   G+   A   F  +   G++  V    LI
Sbjct: 775 SLCSMD--------LQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLI 826

Query: 422 RGH-SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
             +  +EG+ +    +  +M + G   ++     LI   L +GE   A   L  + E   
Sbjct: 827 AENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNF 886

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           S  +S   S++ SLF     Q  +   KS+ EK
Sbjct: 887 SLEAST-TSMLISLFSREEYQQHA---KSLPEK 915



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 141/582 (24%), Positives = 256/582 (43%), Gaps = 82/582 (14%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L  A+  + A   F+ +   G+   D  T+  +I+ L +   ++ A  +   M
Sbjct: 333 YNTIIDGLCKAQAIDKAEGVFQQMIDKGV-KPDNLTYTIIIDGLCKAQSVDRAEGVFQQM 391

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KGV+ +   +  LI  Y   G  +E V+    M    +E  V +Y  L   + + G+ 
Sbjct: 392 IDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKC 451

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F+ M+ +GI+P+   Y +ML G+     L         M + GIS +   +NT+
Sbjct: 452 NEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTV 511

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  Y +   +DE   +F +MK++ + P V++Y T+I     + R DDA+  F++M +  V
Sbjct: 512 ICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGV 571

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN V + +L+ GLC   K  +V+++  EM+ + I P D   F  +L   CK G +  A 
Sbjct: 572 TPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP-DIVFFNTVLCNLCKEGRVMEAR 630

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            ++ +M+ + +  +   Y  LI+  C A   D A+KLLD                M ++ 
Sbjct: 631 RLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG---------------MVSAG 675

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             P I                           V++N L+ G+ K G  D+A+ + + M R
Sbjct: 676 LKPNI---------------------------VSYNTLLHGYCKAGRIDNAYCLFREMLR 708

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIE--------------DGHS------P 482
           +GV    + Y  ++    R G  ++A+    +MI+              DG         
Sbjct: 709 KGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDE 768

Query: 483 ASSLFRSV---------------MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A  +F+S+               ++ LF+ GR + A  +  ++   G+  ++     I E
Sbjct: 769 AFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAE 828

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
            L+  G +EE      +M +SG+ PN    ++L+  L ++G+
Sbjct: 829 NLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGE 870



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 225/485 (46%), Gaps = 19/485 (3%)

Query: 163 TYNVMLWGFFLSLKLETA---IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
           +YN +L G     + E A   +    D +    S DVV+YN +ING+    ++D+A  LF
Sbjct: 157 SYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF 216

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
            EM    + P V++Y T+I G    +  D A  +F +M    VKPN VTY  ++ GLC A
Sbjct: 217 LEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKA 273

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
            ++   + V ++MV++ + P  N  +  ++   CK+  ++ A  V + MI   +  +   
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPS-NVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVT 332

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  +I+  CKA+  D+A  +  ++++K +  +P +       +Y  +I  LC      +A
Sbjct: 333 YNTIIDGLCKAQAIDKAEGVFQQMIDKGV--KPDNL------TYTIIIDGLCKAQSVDRA 384

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           E  F+Q++ KGV  +   +N LI G+   G  +   + +K M    +  D   Y  L++ 
Sbjct: 385 EGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             + G+  +A++  DSMI  G  P+ +++  ++    + G +     ++  MV  G+  N
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
             +   ++ A   R  ++E +     M Q G  PN   + +L+  L + G+   AV   +
Sbjct: 505 HRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFN 564

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             +      +   +  ++  L    K      +  +++ +G   D    + ++  L +EG
Sbjct: 565 QMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEG 624

Query: 636 NTKQA 640
              +A
Sbjct: 625 RVMEA 629



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 237/512 (46%), Gaps = 20/512 (3%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR-FFED 186
           +Y  +     R GR  +    F  +L  G        N +L G   + ++  A+      
Sbjct: 86  TYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQ 145

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM---KEKNIEPTVISYTTMIKGYVA 243
           M   G  L VV+YNT++ G    ++ +EA +L   M   ++ +  P V+SY  +I G+  
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             + D A  +F EM    V P+ VTY  ++ GLC A ++   + V ++MVE+ + P +N 
Sbjct: 206 EGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP-NNV 261

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  ++   CK+  ++ A  V + M+   +      Y  +I+  CKA+  DRA  +  ++
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIR 422
           +++ +  +P         +YN +I  LC      KAE  F+Q++ KGV  D + +  +I 
Sbjct: 322 IDRGV--KPDHV------TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIID 373

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  K  + D A  + + M  +GV  +   Y CLI  YL  G+  +    +  M      P
Sbjct: 374 GLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEP 433

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               +  +++ L ++G+   A  +  SM+ KG+K ++ +   +L     +G + E    +
Sbjct: 434 DVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLL 493

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
           +LM+ +G  PN   F++++   +++      + +      +    ++ +Y  ++DAL   
Sbjct: 494 NLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKL 553

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           G+  +A     +++ +G   +    + L+ GL
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGL 585



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 173/402 (43%), Gaps = 21/402 (5%)

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R   D  ++ ++ D  TY+ +I  + R  +++     F  + +       I    ++KG 
Sbjct: 71  RMLRDCSNK-VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGL 129

Query: 242 VAVERADDALRIF-DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              +R  +A+ +   +M     +   V+Y  LL GLCD  +  E +++L  MV+     +
Sbjct: 130 CDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVD----GQ 185

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKA---MIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           D+S    ++              V KA    + + +  +   Y  +I+  CKA+  DRA 
Sbjct: 186 DSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAE 245

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            +  ++VEK +  +P +       +YN +I  LC   +   AE  F++++ KGV    V 
Sbjct: 246 DVFQQMVEKGV--KPNNV------TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVT 297

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N +I G  K    D A  + + M  RGV  D   Y  +I+   +      A+     MI
Sbjct: 298 YNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMI 357

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           + G  P +  +  +++ L +   V  A  V + M++KGVK N      ++   L  G  E
Sbjct: 358 DKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWE 417

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           E + RI  M      P+   +  LL  L + GK   A  L D
Sbjct: 418 EVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFD 459


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 155/659 (23%), Positives = 291/659 (44%), Gaps = 67/659 (10%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILG 67
           R  N I  L   F  ++V  VL   + N   +L FF++V +   F  + +++ K++ IL 
Sbjct: 54  RRCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILS 113

Query: 68  RVGKLNHARCIL---LDMPK----KGVQWDE------------DMFEVLIESYGKKGIVQ 108
           R    +  R  L   +D+ K      V WDE             +F+++++ Y +KG+ +
Sbjct: 114 RGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTK 173

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
            ++ +FD M + G   S++S ++L   +++ G    A   + +M+  GI P         
Sbjct: 174 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVP--------- 224

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
                                     DV   + M+N + +  K+DEA     +M+   +E
Sbjct: 225 --------------------------DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVE 258

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P +++Y ++I GYV++   + A  +   M    V  N VTYT L+ G C   KM E +KV
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKV 318

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           LR M E      D   +  L+   C++G ++ A  +L  M+RL + T       LI  +C
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 378

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A  ++ ++V+    L+P S       SYN ++   C  G T +A     ++++
Sbjct: 379 KRGEIHEAEGVITRMVDWN--LKPDSY------SYNTLLDGYCREGHTSEAFNLCDKMLQ 430

Query: 409 KGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +G+   V  +N L++G  + G  D A +I  +M +RGV  D   Y  L++   +      
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 490

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A T    ++  G + +   F +++  L + G++  A  +   M + G   +      +++
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550

Query: 528 ALLMRGHVEEAL---GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                 +V +A    G ++    S S+  ++SL+S L +  + +    LL     R    
Sbjct: 551 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 610

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           ++ +Y  ++D     G    A+S  F++ E G   +      +++GL + G   +A++L
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 239/511 (46%), Gaps = 38/511 (7%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+++ A  ++  M    ++ D   +  L++ Y ++G   E+  + D M Q G+E +V +Y
Sbjct: 381 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L K + R G +  A + ++ M+  G+ P    Y+ +L G F     E A   ++D+ +
Sbjct: 441 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           RG +   +T+NTMI+G  +  KM EAE++F +MK+    P  I+Y T+I GY        
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 560

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A ++   M+   + P+   Y +L+ GL  + ++VEV  +L EM  R + P +   +  L+
Sbjct: 561 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP-NIVTYGALI 619

Query: 310 GVQCKSGHLNAA-------------------ADVLKAMIRLSIPTEAG-------HYGIL 343
              CK G L+ A                   + ++  + RL    EA         +G  
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679

Query: 344 IENFC--KAEMYDRAI-KLLDKLVEK-EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
            ++ C  K+++   AI K+ D L E  +  L P + +      YN  I  LC  G+   A
Sbjct: 680 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV------YNIAIAGLCKTGKVDDA 733

Query: 400 EIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
             FF  L  KG V D   +  LI G+S  GN D AF +   M RRG+  +   Y  LI  
Sbjct: 734 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING 793

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             +      A+     + + G  P    + ++++   + G +  A ++   M+E+G+  +
Sbjct: 794 LCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 853

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           +   + ++  L   G +E ++  ++ M+++G
Sbjct: 854 VVTYSALINGLCKHGDIERSMKLLNQMIKAG 884



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++ + I    K G V ++ + F ++   G      +Y  L       G    A R  ++M
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L  G+ P   TYN ++ G   S  ++ A R F  +  +G+  +VVTYNT+I+GY +   M
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D A KL  +M E+ I P+V++Y+ +I G       + ++++ ++M    V    + Y  L
Sbjct: 836 DAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTL 895

Query: 273 LPGLCDAGKMVEVQKVLREM 292
           + G   +G+M ++ K+   M
Sbjct: 896 VQGYIRSGEMQKIHKLYDMM 915



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 103/204 (50%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L + GK++ AR     +  KG   D   +  LI  Y   G V E+ ++ D M + G+  +
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           + +Y+AL   + +      A+R F+K+  +G+ P   TYN ++ G+     ++ A +  +
Sbjct: 784 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M   GIS  VVTY+ +ING  +   ++ + KL  +M +  ++  +I Y T+++GY+   
Sbjct: 844 KMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSG 903

Query: 246 RADDALRIFDEMKSFDVKPNAVTY 269
                 +++D M    +   A+++
Sbjct: 904 EMQKIHKLYDMMHIRCLSTTAISH 927



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 5/216 (2%)

Query: 23  HNLVYNV----LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           +N+VYN+    L      + A +FF  +   G F  D  T+  +I      G ++ A  +
Sbjct: 713 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG-FVPDNFTYCTLIHGYSAAGNVDEAFRL 771

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
             +M ++G+  +   +  LI    K   V  + ++F  + Q G+  +V +Y+ L     +
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G    A +  +KM+ EGI P+  TY+ ++ G      +E +++    M   G+   ++ 
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           Y T++ GY R  +M +  KL+  M  + +  T IS+
Sbjct: 892 YCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 153/630 (24%), Positives = 276/630 (43%), Gaps = 33/630 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMI--EILGRVGKLNHARCILLDMP------------- 83
           AL+F +WV +      D    L  I   IL R    + AR IL ++              
Sbjct: 53  ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 112

Query: 84  ---KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
               +    +  ++++LI  Y ++G++Q+S++IF +M   G   SV + +A+   +++ G
Sbjct: 113 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 172

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
             +    +  +ML   I P   T+N+++         E +    + M+  G +  +VTYN
Sbjct: 173 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 232

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++ Y +  +   A +L   MK K ++  V +Y  +I       R      +  +M+  
Sbjct: 233 TVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 292

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + PN VTY  L+ G  + GK++   ++L EM+   + P ++  F  L+      G+   
Sbjct: 293 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP-NHVTFNALIDGHISEGNFKE 351

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +   M    +      YG+L++  CK   +D A     ++         ++ + +  
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM--------KRNGVCVGR 403

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVK 438
            +Y  MI  LC NG   +A +   ++ K G+ DP  V ++ LI G  K G   +A EIV 
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVC 462

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            + R G+  +   Y  LI +  R G   +A    ++MI +GH+     F  ++ SL + G
Sbjct: 463 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---D 555
           +V  A   M+ M   G+  N      ++      G   +A    D M + G  P F    
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           SLL  L + G    A K L         +D   Y  +L A+  +G    A S+  +++++
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
             + D  +   LI+GL ++G T  A + ++
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAK 672



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 147/617 (23%), Positives = 280/617 (45%), Gaps = 18/617 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + +L+ FR +   G FN    T   ++  + + G+       L +M K+ +  D   F +
Sbjct: 140 QDSLEIFRLMGLYG-FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 198

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI     +G  ++S  +   M++ G   ++ +Y+ +     ++GR+  A    + M S+G
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           ++    TYN+++     S ++        DM+ R I  + VTYNT+ING++   K+  A 
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 318

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +L  EM    + P  +++  +I G+++     +AL++F  M++  + P+ V+Y  LL GL
Sbjct: 319 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   +  ++ +     ++R         +  ++   CK+G L+ A  +L  M +  I  +
Sbjct: 379 CKNAEF-DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP-QSTLDMEASSYNPMIQHLCHNGQ 395
              Y  LI  FCK   +  A         KEI+ R  +  L      Y+ +I + C  G 
Sbjct: 438 IVTYSALINGFCKVGRFKTA---------KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488

Query: 396 TGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A   +  ++ +G   D   FN L+    K G    A E ++ M   G+  +  ++ C
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI  Y   GE   A +  D M + GH P    + S+++ L + G ++ A + +KS+    
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
              +  +   +L A+   G++ +A+     M+Q   +P+   + SL+S L  KGKT+ A+
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 572 KLLDFCLGRDCII-DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
                   R  ++ +   Y   +D +  AG+         ++   G   D  +++ +I G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 631 LNQEGNT-KQADILSRM 646
            ++ G   K  D+L  M
Sbjct: 729 YSRMGKIEKTNDLLPEM 745



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 144/649 (22%), Positives = 277/649 (42%), Gaps = 55/649 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L R  ++     +L DM K+ +  +E  +  LI  +  +G V  + ++ 
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M   G+  +  +++AL    +  G +  A + F  M ++G+ P+  +Y V+L G   +
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 381

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + + A  F+  MK  G+ +  +TY  MI+G  +   +DEA  L  EM +  I+P +++Y
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I G+  V R   A  I   +    + PN + Y+ L+   C  G + E  ++   M+ 
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
                +D+  F  L+   CK+G +  A + ++ M    I      +  LI  +  +    
Sbjct: 502 EG-HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 560

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLD 413
           +A  + D++ +    +    T      +Y  +++ LC  G   +AE F + L      +D
Sbjct: 561 KAFSVFDEMTK----VGHHPTF----FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 612

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP-------- 465
            V +N L+    K GN   A  +   M +R +  D+  Y  LI    RKG+         
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 672

Query: 466 -ADAK-----------TALDSMIEDGHSPASSLFRSVMESLFED---------------- 497
            A+A+             +D M + G   A   FR  M++L                   
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G+++  + ++  M  +    NL     +L     R  V  +      ++ +G +P+    
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            SL+  + E       +K+L   + R   +D  ++  ++    A G+   A+  L K+M 
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD-LVKVMT 851

Query: 615 KGGVT-DWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKEKKQK 662
             G++ D  + D +++ LN+    ++    SRM+  EMS+     + +K
Sbjct: 852 SLGISLDKDTCDAMVSVLNRNHRFQE----SRMVLHEMSKQGISPESRK 896



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 154/702 (21%), Positives = 282/702 (40%), Gaps = 74/702 (10%)

Query: 33   AKNSEHALQ--FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
             KN+E  L   F+  ++R G+    R T+  MI+ L + G L+ A  +L +M K G+  D
Sbjct: 379  CKNAEFDLARGFYMRMKRNGVCV-GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 91   EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
               +  LI  + K G  + + +I   + ++G+  +   Y  L     R G    A R + 
Sbjct: 438  IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 151  KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
             M+ EG      T+NV++     + K+  A  F   M S GI  + V+++ +INGY    
Sbjct: 498  AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557

Query: 211  KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
            +  +A  +F EM +    PT  +Y +++KG        +A +    + +     + V Y 
Sbjct: 558  EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617

Query: 271  ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK-AMI 329
             LL  +C +G + +   +  EMV+R I P D+  +  L+   C+ G    A    K A  
Sbjct: 618  TLLTAMCKSGNLAKAVSLFGEMVQRSILP-DSYTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 330  RLSIPTEAGHYGILIENFCKAEMYDRAIKL---LDKLVEKEIILRPQSTLDMEA------ 380
            R ++      Y   ++   KA  +   I     +D L     I+   + +D  +      
Sbjct: 677  RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736

Query: 381  ------------------SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL---------- 412
                              ++YN ++           + + +R ++  G+L          
Sbjct: 737  KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796

Query: 413  --------------------------DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
                                      D   FN LI      G  + AF++VK+M   G+ 
Sbjct: 797  LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 856

Query: 447  RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
             D D    ++    R     +++  L  M + G SP S  +  ++  L   G ++TA  V
Sbjct: 857  LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 916

Query: 507  MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSE 563
             + M+   +       + ++ AL   G  +EA   +  M++   VP   +F +L+ +  +
Sbjct: 917  KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 976

Query: 564  KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
             G  I A++L          +DL SY  ++  L A G    A+ +  ++   G + +  +
Sbjct: 977  NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATT 1036

Query: 624  SDKLIAG-LNQEGNTKQADILSR--MIRGEMSRGSQKEKKQK 662
               LI G L +E     ADI+ +  + RG ++  S  +   +
Sbjct: 1037 YKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSHR 1078


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 153/630 (24%), Positives = 274/630 (43%), Gaps = 33/630 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMI--EILGRVGKLNHARCILLDMP------------- 83
           AL+F +WV +      D    L  I   IL R    + AR IL ++              
Sbjct: 93  ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 152

Query: 84  ---KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
               +    +  ++++LI  Y ++G++Q+S++IF +M   G   SV + +A+   +++ G
Sbjct: 153 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 212

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
             +    +  +ML   I P   T+N+++         E +    + M+  G +  +VTYN
Sbjct: 213 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 272

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++ Y +  +   A +L   MK K ++  V +Y  +I       R      +  +M+  
Sbjct: 273 TVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 332

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + PN VTY  L+ G  + GK++   ++L EM+   + P ++  F  L+      G+   
Sbjct: 333 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP-NHVTFNALIDGHISEGNFKE 391

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +   M    +      YG+L++  CK   +D A     ++    + +          
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV--------GR 443

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVK 438
            +Y  MI  LC NG   +A +   ++ K G+ DP  V ++ LI G  K G   +A EIV 
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVC 502

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            + R G+  +   Y  LI +  R G   +A    ++MI +GH+     F  ++ SL + G
Sbjct: 503 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---D 555
           +V  A   M+ M   G+  N      ++      G   +A    D M + G  P F    
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           SLL  L + G    A K L         +D   Y  +L A+  +G    A S+  +++++
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
             + D  +   LI+GL ++G T  A + ++
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAK 712



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 147/617 (23%), Positives = 280/617 (45%), Gaps = 18/617 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + +L+ FR +   G FN    T   ++  + + G+       L +M K+ +  D   F +
Sbjct: 180 QDSLEIFRLMGLYG-FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI     +G  ++S  +   M++ G   ++ +Y+ +     ++GR+  A    + M S+G
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           ++    TYN+++     S ++        DM+ R I  + VTYNT+ING++   K+  A 
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +L  EM    + P  +++  +I G+++     +AL++F  M++  + P+ V+Y  LL GL
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   +  ++ +     ++R         +  ++   CK+G L+ A  +L  M +  I  +
Sbjct: 419 CKNAEF-DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP-QSTLDMEASSYNPMIQHLCHNGQ 395
              Y  LI  FCK   +  A         KEI+ R  +  L      Y+ +I + C  G 
Sbjct: 478 IVTYSALINGFCKVGRFKTA---------KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528

Query: 396 TGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A   +  ++ +G   D   FN L+    K G    A E ++ M   G+  +  ++ C
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI  Y   GE   A +  D M + GH P    + S+++ L + G ++ A + +KS+    
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
              +  +   +L A+   G++ +A+     M+Q   +P+   + SL+S L  KGKT+ A+
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708

Query: 572 KLLDFCLGRDCII-DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
                   R  ++ +   Y   +D +  AG+         ++   G   D  +++ +I G
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768

Query: 631 LNQEGNT-KQADILSRM 646
            ++ G   K  D+L  M
Sbjct: 769 YSRMGKIEKTNDLLPEM 785



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 144/649 (22%), Positives = 277/649 (42%), Gaps = 55/649 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L R  ++     +L DM K+ +  +E  +  LI  +  +G V  + ++ 
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M   G+  +  +++AL    +  G +  A + F  M ++G+ P+  +Y V+L G   +
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 421

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + + A  F+  MK  G+ +  +TY  MI+G  +   +DEA  L  EM +  I+P +++Y
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 481

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I G+  V R   A  I   +    + PN + Y+ L+   C  G + E  ++   M+ 
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
                +D+  F  L+   CK+G +  A + ++ M    I      +  LI  +  +    
Sbjct: 542 EG-HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLD 413
           +A  + D++ +    +    T      +Y  +++ LC  G   +AE F + L      +D
Sbjct: 601 KAFSVFDEMTK----VGHHPTF----FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 652

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP-------- 465
            V +N L+    K GN   A  +   M +R +  D+  Y  LI    RKG+         
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 712

Query: 466 -ADAK-----------TALDSMIEDGHSPASSLFRSVMESLFED---------------- 497
            A+A+             +D M + G   A   FR  M++L                   
Sbjct: 713 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G+++  + ++  M  +    NL     +L     R  V  +      ++ +G +P+    
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 832

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            SL+  + E       +K+L   + R   +D  ++  ++    A G+   A+  L K+M 
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD-LVKVMT 891

Query: 615 KGGVT-DWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKEKKQK 662
             G++ D  + D +++ LN+    ++    SRM+  EMS+     + +K
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQE----SRMVLHEMSKQGISPESRK 936



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 156/733 (21%), Positives = 283/733 (38%), Gaps = 107/733 (14%)

Query: 35   NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
            N + AL+ F  +E  GL      ++  +++ L +  + + AR   + M + GV      +
Sbjct: 388  NFKEALKMFYMMEAKGL-TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446

Query: 95   EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
              +I+   K G + E+V + + M + G++  + +Y AL     + GR+  AK    ++  
Sbjct: 447  TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506

Query: 155  EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
             G+ P    Y+ +++       L+ AIR +E M   G + D  T+N ++    +  K+ E
Sbjct: 507  VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566

Query: 215  AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
            AE+    M    I P  +S+  +I GY        A  +FDEM      P   TY +LL 
Sbjct: 567  AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626

Query: 275  GLCDAGKMVEVQKVLR-----------------------------------EMVERYIPP 299
            GLC  G + E +K L+                                   EMV+R I P
Sbjct: 627  GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686

Query: 300  KDNSVFMKLLGVQCKSGHLNAAADVLK-AMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
             D+  +  L+   C+ G    A    K A  R ++      Y   ++   KA  +   I 
Sbjct: 687  -DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745

Query: 359  L---LDKLVEKEIILRPQSTLDMEA------------------------SSYNPMIQHLC 391
                +D L     I+   + +D  +                        ++YN ++    
Sbjct: 746  FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805

Query: 392  HNGQTGKAEIFFRQLMKKGVL------------------------------------DPV 415
                   + + +R ++  G+L                                    D  
Sbjct: 806  KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865

Query: 416  AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
             FN LI      G  + AF++VK+M   G+  D D    ++    R     +++  L  M
Sbjct: 866  TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925

Query: 476  IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
             + G SP S  +  ++  L   G ++TA  V + M+   +       + ++ AL   G  
Sbjct: 926  SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 985

Query: 536  EEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
            +EA   +  M++   VP   +F +L+ +  + G  I A++L          +DL SY  +
Sbjct: 986  DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045

Query: 593  LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG-LNQEGNTKQADILSR--MIRG 649
            +  L A G    A+ +  ++   G + +  +   LI G L +E     ADI+ +  + RG
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1105

Query: 650  EMSRGSQKEKKQK 662
             ++  S  +   +
Sbjct: 1106 FITSMSLSQDSHR 1118


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 146/630 (23%), Positives = 278/630 (44%), Gaps = 19/630 (3%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           L P F  + + ++L    +S  AL  F+W      ++       +++  L R G  +   
Sbjct: 53  LPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSML 112

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK-IFDIM-KQLGVERSVKSYDALFK 134
            +L  M    +  DE  F + +E+Y     +   +  +F +M +   V+   + Y+    
Sbjct: 113 TLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALS 172

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
           L+++  +  + +   +KM+++ + P   T+N+++     + +L  AI   EDM + G+  
Sbjct: 173 LLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRP 232

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D  T+ T++ G+     ++ A ++   M E   E T +S   ++ G     R ++ALR  
Sbjct: 233 DEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI 292

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            E + F   P+ VT+ AL+ GLC  G + +  +++  M+E+     D   +  L+   CK
Sbjct: 293 YEEEGF--CPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGF-ELDVYTYNSLISGLCK 349

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G ++ A ++L  M+          Y  LI   CK    + A +L   L  K ++     
Sbjct: 350 LGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVL----- 404

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDS 432
               +  ++N +IQ LC       A   F ++ +KG  DP    ++ LI     E     
Sbjct: 405 ---PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGC-DPDEFTYSILIESLCSERRLKE 460

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  ++K M   G  R+   Y  LI+   +     DA+   D M   G S +S  + +++ 
Sbjct: 461 ALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLIN 520

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
            L +  RV+ A+++M  M+ +G+K +      +L+    +G ++ A   +  M  +G  P
Sbjct: 521 GLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEP 580

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +   + +L+  L + G+   A KLL     +  ++   +Y  V+ AL    +T  A  + 
Sbjct: 581 DIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLF 640

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
            ++MEKG   D  +   +  GL   G   Q
Sbjct: 641 REMMEKGDPPDVITYKIVFRGLCNGGGPIQ 670



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/532 (23%), Positives = 237/532 (44%), Gaps = 48/532 (9%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I  L +  +L  A  +L DMP  G++ DE  F  L++ + ++  V+ +++I 
Sbjct: 198 DVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIK 257

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           ++M + G E +  S + L   + + GR   A R+  +   EG  P + T+N ++ G   +
Sbjct: 258 ELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRT 315

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             ++  +   + M  +G  LDV TYN++I+G  +  ++DEA ++   M  ++ EP  ++Y
Sbjct: 316 GHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY 375

Query: 235 TTMI-----------------------------------KGYVAVERADDALRIFDEMKS 259
            T+I                                   +G       + A+ +F+EMK 
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE 435

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               P+  TY+ L+  LC   ++ E   +L+EM E     ++  V+  L+   CK+  + 
Sbjct: 436 KGCDPDEFTYSILIESLCSERRLKEALMLLKEM-ELSGCARNVVVYNTLIDGLCKNNRVG 494

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A D+   M  L +   +  Y  LI   CK++  + A +L+D+++ +   L+P      +
Sbjct: 495 DAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEG--LKP------D 546

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +Y  M+++ C  G   +A    + +   G   D V +  LI G  K G  D A ++++
Sbjct: 547 KFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLR 606

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            +  +G+     AY  +I++  ++    +A      M+E G  P    ++ V   L   G
Sbjct: 607 SVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGG 666

Query: 499 -RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
             +Q A      M+EKG+         + E L      +  +  I+++M+ G
Sbjct: 667 GPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG 718



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 9/350 (2%)

Query: 23  HNLVYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           + + YN L G      + E A +  R +   G+   D  T   +I+ L        A  +
Sbjct: 371 NTVTYNTLIGTLCKENHVEAATELARVLTSKGVLP-DVCTFNSLIQGLCLTSNREIAMEL 429

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
             +M +KG   DE  + +LIES   +  ++E++ +   M+  G  R+V  Y+ L   + +
Sbjct: 430 FEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             R   A+  F++M   G+  +  TYN ++ G   S ++E A +  + M   G+  D  T
Sbjct: 490 NNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFT 549

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD--E 256
           Y TM+  + +   +  A  +   M     EP +++Y T+I G     R D A ++    +
Sbjct: 550 YTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQ 609

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           MK   + P A  Y  ++  LC   +  E  ++ REM+E+  PP   +  +   G+    G
Sbjct: 610 MKGMVLTPQA--YNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGG 667

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            +  A D    M+   I  E   +G L E  C   M D  I+L++ ++EK
Sbjct: 668 PIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEK 717



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 18/345 (5%)

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           SVF +LL    ++G  ++   +L+ M    IP +   + I +E +  +      I  L  
Sbjct: 93  SVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFL 152

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLI 421
           L+E++  ++P +        YN  +  L    +    E    +++   V   V+ FN LI
Sbjct: 153 LMERDFAVKPDTRF------YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILI 206

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL---DSMIED 478
           R   K      A  +++ M   G+  D   +  L++ ++   E AD + AL   + M+E 
Sbjct: 207 RALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFI---EEADVEGALRIKELMVES 263

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G    S     ++  L ++GR++ A R +    E+G   +      ++  L   GH+++ 
Sbjct: 264 GCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQG 321

Query: 539 LGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           L  +D M++ G    V  ++SL+S L + G+   AV++L   + RDC  +  +Y  ++  
Sbjct: 322 LEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGT 381

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           L        A  +   +  KG + D  + + LI GL    N + A
Sbjct: 382 LCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIA 426



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 4/230 (1%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L  +K  E A Q    +   GL   D+ T+  M++   + G +  A  I+ +M
Sbjct: 515 YNTLINGLCKSKRVEEAAQLMDQMIMEGL-KPDKFTYTTMLKYFCQQGDIKRAADIVQNM 573

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G + D   +  LI    K G V  + K+   ++  G+  + ++Y+ + + + +R R 
Sbjct: 574 TLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRT 633

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL-KLETAIRFFEDMKSRGISLDVVTYNT 201
             A R F +M+ +G  P   TY ++  G       ++ A+ F  +M  +GI  +  ++  
Sbjct: 634 KEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGF 693

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           +  G       D   +L   + EK       S T++I+G++ +++ +DAL
Sbjct: 694 LAEGLCSLSMEDTLIQLINMVMEKGRFSQ--SETSIIRGFLKIQKFNDAL 741


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/532 (25%), Positives = 242/532 (45%), Gaps = 27/532 (5%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           LV  +    K S+  L   R VE    F  +  T+  +++++ + G+   A  +L  M +
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETG--FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           + ++ D   + ++I+   K G +  +  +F+ M+  G +  +  Y  L +     GR+  
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
             +    M+   I P    ++ ++  F    KL  A    ++M  RGIS D VTY ++I+
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G+ +  ++D+A  +   M  K   P + ++  +I GY      DD L +F +M    V  
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + VTY  L+ G C+ GK+   +++ +EMV R + P D   +  LL   C +G    A ++
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP-DIVSYKILLDGLCDNGEPEKALEI 479

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
            + + +  +  + G Y I+I   C A   D A  L   L        P   +  +  +YN
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL--------PLKGVKPDVKTYN 531

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            MI  LC  G   +A++ FR++ + G   +   +N LIR H  EG+   + ++++ + R 
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME--SLFEDGRVQ 501
           G   DA        S LR      A + L  M++ GH P    F +++    L E+  V 
Sbjct: 592 GFSVDA--------STLRF-----ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVY 638

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            A  + K+M   G K N+     +++ LL    + +  G +D M + G  PN
Sbjct: 639 DAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPN 690



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 163/678 (24%), Positives = 293/678 (43%), Gaps = 60/678 (8%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
            D + +++V+   K  +  L   + +E  G+  H+  T   MI    R  KL+ A   + 
Sbjct: 73  IDFSRLFSVVARTKQYDLVLDLCKQMELKGI-AHNLYTLSIMINCCCRCRKLSLAFSAMG 131

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            + K G + D   F  LI     +G V E++++ D M ++G + ++ + +AL   +   G
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A    ++M+  G +P   TY  +L     S +   A+     M+ R I LD V Y+
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G  +   +D A  LF EM+ K  +  +I YTT+I+G+    R DD  ++  +M   
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+ V ++AL+      GK+ E +++ +EM++R I P D   +  L+   CK   L+ 
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP-DTVTYTSLIDGFCKENQLDK 370

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL----------------- 363
           A  +L  M+          + ILI  +CKA + D  ++L  K+                 
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430

Query: 364 ---------VEKEII-------LRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQL 406
                    V KE+        +RP      +  SY  ++  LC NG+  KA EIF +  
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRP------DIVSYKILLDGLCDNGEPEKALEIFEKIE 484

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
             K  LD   +N +I G       D A+++   +  +GV  D   Y  +I    +KG  +
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A      M EDGHSP    +  ++ +   +G    ++++++ +   G           +
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS---------V 595

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS--VLSEKGKTIAAVKLLDFCLGRD 581
           +A  +R     AL  +  M+++G  P+   F +LL    L E      A  L        
Sbjct: 596 DASTLRF----ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMG 651

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
              ++ +Y  V+  LL          +L ++ E+G   +  +    I+GL ++     A 
Sbjct: 652 YKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAI 711

Query: 642 ILSRMIRGEMSRGSQKEK 659
           +L R +  +    + K+K
Sbjct: 712 LLLRKMENDNEDVTTKKK 729



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/522 (22%), Positives = 230/522 (44%), Gaps = 48/522 (9%)

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           +Y   L    + +K + A+  F++M        ++ ++ + +   R K+ D    L  +M
Sbjct: 39  SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM 98

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           + K I   + + + MI       +   A     ++     +P+ VT++ L+ GLC  G++
Sbjct: 99  ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV 158

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E  +++  MVE    P   ++   + G+ C +G ++ A  ++  M+          YG 
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGL-CLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           +++  CK+     A++LL K+ E++I         ++A  Y+ +I  LC +G    A   
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKI--------KLDAVKYSIIIDGLCKDGSLDNAFNL 269

Query: 403 FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           F ++  KG   D + +  LIRG    G  D   ++++ M +R +  D  A+  LI+ +++
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
           +G+  +A+     MI+ G SP +  + S+++   ++ ++  A+ ++  MV KG   N+  
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL 578
              ++        +++ L     M   G V +   +++L+    E GK   A +L    +
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI----ME-------------------- 614
            R    D+ SY+ +LD L   G+   A  I  KI    ME                    
Sbjct: 450 SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 509

Query: 615 -----------KGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
                      KG   D K+ + +I GL ++G+  +AD+L R
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 128/281 (45%), Gaps = 25/281 (8%)

Query: 397 GKAEIFFRQLMKKGVLD-------------------P--VAFNNLIRGHSKEGNPDSAFE 435
           GK ++ +R+ ++ G++D                   P  + F+ L    ++    D   +
Sbjct: 34  GKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLD 93

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           + K M  +G+  +      +I    R  + + A +A+  +I+ G+ P +  F +++  L 
Sbjct: 94  LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
            +GRV  A  ++  MVE G K  L  +  ++  L + G V +A+  ID M+++G  PN  
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            +  +L V+ + G+T  A++LL     R   +D   Y  ++D L   G   NA+++  ++
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGN-TKQADILSRMIRGEMS 652
             KG   D      LI G    G     A +L  MI+ +++
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 177/745 (23%), Positives = 322/745 (43%), Gaps = 127/745 (17%)

Query: 20  QFDHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           QF   ++ +VL   K N   +L FF+   +   F  +  +H K++ IL R    +  R  
Sbjct: 57  QFSDYILDSVLLKLKFNPIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSY 116

Query: 79  L--LDMPKKG-----VQWDE------------DMFEVLIESYGKKGIVQESVKIFDIMKQ 119
           L  L  P K      V W+E             +F+++++ Y +KG+++ ++ +FD M +
Sbjct: 117 LNELVTPSKNNYSSLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGK 176

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LG   S++S + L   ++R+G    A   ++ +   GI P   T ++M+  +     +  
Sbjct: 177 LGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNV 236

Query: 180 AIRFFEDMKSRGISLDVVTYNTMIN----------------------------------- 204
           A+ F ++M   G  L+VVTYN++I+                                   
Sbjct: 237 AVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIK 296

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVI---SYTTMIKGYVAVERADDALRIFDEMKSFD 261
           GY R  K++EAEK+  EM+    E  V+   +Y  +I GY  V + DDA+R+ DEM +  
Sbjct: 297 GYCRQCKLEEAEKVLREMERS--EGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVG 354

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           ++ N     AL+ G C  G++ E +++L  MV+  + P+  S +  L+   C+ G +  A
Sbjct: 355 LRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYS-YSTLMDGFCREGLVTKA 413

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI-------------------KLLDK 362
             V   M+R+ I +    +  L++  C+   ++ A+                    LLD 
Sbjct: 414 ISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDL 473

Query: 363 LVEKEIILRPQSTL-DMEASSY-------NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
           L +     R  +   D+ A  Y       N MI   C   +  +AE  F ++ + G   D
Sbjct: 474 LFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPD 533

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +  LI G+ K GN + AF++ + M +  +    + Y  LI    +  +  +    L 
Sbjct: 534 GVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLS 593

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M   G SP    + +++    ++GR+  A      M+EKG   N+ + +KI+ +L   G
Sbjct: 594 EMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLG 653

Query: 534 HVEEA------LGRIDLMMQSG-----------------------------SVPN---FD 555
            ++EA      +  +D+ +  G                             S+PN   ++
Sbjct: 654 RIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYN 713

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
             ++ L + GK   A K+    L R    D  +Y  ++    AAG   +A+S+  +++++
Sbjct: 714 IAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKR 773

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQA 640
           G   +  + + LI GL + GN  +A
Sbjct: 774 GLAPNIITYNALINGLCKSGNLDRA 798



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 234/504 (46%), Gaps = 29/504 (5%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+++ A  +L+ M    ++ +   +  L++ + ++G+V +++ +++ M ++G++ +V ++
Sbjct: 373 GQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTH 432

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           ++L K + R G +  A   ++ ML  G+ P   +Y  +L   F   +   A+  + D+ +
Sbjct: 433 NSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILA 492

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           RG       +NTMING+ + +KM EAE+ F  MKE   EP  ++Y T+I GY  +   ++
Sbjct: 493 RGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEE 552

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A ++ ++M+   + P+   Y +L+ GL  + K  EV  +L EM  + + P +   +  L+
Sbjct: 553 AFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSP-NVVTYGTLI 611

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G L+ A      MI             ++ +  +    D A  LL K+V  ++ 
Sbjct: 612 AGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVF 671

Query: 370 L-------------------RPQSTLDMEASS--------YNPMIQHLCHNGQTGKAEIF 402
           L                   +   TLD  + S        YN  I  LC +G+   A+  
Sbjct: 672 LDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKI 731

Query: 403 FRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           F  L+ +G   D   +  LI G+S  GN + AF +   M +RG+  +   Y  LI    +
Sbjct: 732 FSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCK 791

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
            G    A+   D +   G +P    +  +++   ++G  + A  +   M+++G+  +L  
Sbjct: 792 SGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLIT 851

Query: 522 VAKILEALLMRGHVEEALGRIDLM 545
            + ++     +G + +A   +D M
Sbjct: 852 YSALIYGFCKQGDMGKATNLLDEM 875



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 140/571 (24%), Positives = 238/571 (41%), Gaps = 34/571 (5%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A +  R +ER+     D   +  +I+   RV K++ A  +  +M   G++ +  +   
Sbjct: 305 EEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNA 364

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI  Y K G V E+ ++   M    +E    SY  L     R G    A   +N+ML  G
Sbjct: 365 LINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVG 424

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I+    T+N +L G       E A+  +  M  RG++ D V+Y T+++   +  +   A 
Sbjct: 425 IQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRAL 484

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L+ ++  +    +  ++ TMI G+  +E+  +A   F+ MK    +P+ VTY  L+ G 
Sbjct: 485 ALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGY 544

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  G + E  KV  +M +  I P    ++  L+G   KS       D+L  M    +   
Sbjct: 545 CKLGNVEEAFKVKEKMEKEAILPSI-ELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPN 603

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY--------NPMIQ 388
              YG LI  +C     D+A      ++EK           + +S Y        N ++Q
Sbjct: 604 VVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQ 663

Query: 389 HLCHNGQTGKAEIFFRQLMKK--GVLD-------------------PVAFNNLIRGHSKE 427
            +  N        +F +L K   G LD                    V +N  I G  K 
Sbjct: 664 KMV-NLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKS 722

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G  D A +I   +  RG   D   Y  LI  Y   G   DA +  D M++ G +P    +
Sbjct: 723 GKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITY 782

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            +++  L + G +  A ++   +  KG+  N+     +++     G+  EAL   + M++
Sbjct: 783 NALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLK 842

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
            G  P+   + +L+    ++G    A  LLD
Sbjct: 843 EGISPSLITYSALIYGFCKQGDMGKATNLLD 873



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 225/484 (46%), Gaps = 16/484 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           TH  +++ L RVG    A  +   M K+GV  DE  +  L++   K G    ++ +++ +
Sbjct: 431 THNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDI 490

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G  RS  +++ +     +  + + A+  FN+M   G EP   TY  ++ G+     +
Sbjct: 491 LARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNV 550

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A +  E M+   I   +  YN++I G  + KK  E   L +EM  K + P V++Y T+
Sbjct: 551 EEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTL 610

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G+    R D A   + +M      PN +  + ++  L   G++ E   +L++MV   +
Sbjct: 611 IAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDV 670

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAA--ADVL-KAMIRLSIPTEAGHYGILIENFCKAEMYD 354
              D+  F +L   +   G+L++   AD L ++    S+P     Y I I   CK+   D
Sbjct: 671 FL-DHGYFDRLH--KADDGNLDSQKIADTLDESSKSFSLPNSV-VYNIAIAGLCKSGKVD 726

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A K+   L     +LR  S    +  +Y  +I      G    A     +++K+G+  +
Sbjct: 727 DAKKIFSSL-----LLRGFSP---DNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPN 778

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + +N LI G  K GN D A ++   +  +G+  +  +Y  LI+ Y + G   +A    +
Sbjct: 779 IITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRN 838

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+++G SP+   + +++    + G +  A+ ++  M E    +N+    K++E  +  G
Sbjct: 839 KMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCG 898

Query: 534 HVEE 537
            V++
Sbjct: 899 EVKK 902



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 140/279 (50%), Gaps = 10/279 (3%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM--- 117
           K++  L R+G+++ A  +L  M    V  D   F+ L ++        +S KI D +   
Sbjct: 644 KIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGN---LDSQKIADTLDES 700

Query: 118 -KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
            K   +  SV  Y+     + + G+   AK+ F+ +L  G  P   TY  ++ G+  +  
Sbjct: 701 SKSFSLPNSV-VYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGN 759

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +  A    ++M  RG++ +++TYN +ING  +   +D A+KLF ++  K + P VISY  
Sbjct: 760 VNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNI 819

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I GY       +AL + ++M    + P+ +TY+AL+ G C  G M +   +L EM E +
Sbjct: 820 LIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELF 879

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
              ++ + F+KL+    K G +   A  L  M+ ++IP 
Sbjct: 880 -ADQNIAKFVKLVEGHVKCGEVKKIAK-LHNMMHITIPC 916


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 139/584 (23%), Positives = 269/584 (46%), Gaps = 41/584 (7%)

Query: 28  NVLHGAKN---SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
            V+HG  N   +  A   F  + R G+   D  T+  +I+ L +   ++ A  +L  M  
Sbjct: 270 TVIHGFFNEGETGKACSLFHEMTRQGV-KPDVVTYNLIIDALCKARAMDKAELVLRQMTT 328

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            G Q D   +  +I  Y   G ++E+ K+F  MK+ G+  ++ + ++    + + GR   
Sbjct: 329 DGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKE 388

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  +F+ M ++G +P   +Y  +L G+         I  F  MKS GI+ +   +  +I+
Sbjct: 389 AAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIH 448

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            Y +   +D+A  +F EM+++ + P V++Y+T+I  +  + R  DA+  F++M +  ++P
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQP 508

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N   Y++++ G C  G +V+ ++++ EM+ + IP  D   F  ++   CK G +  A D+
Sbjct: 509 NTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDI 568

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL----VEKEIIL---------- 370
                 +        +  LI+ +C     D+A K+LD +    VE +I+           
Sbjct: 569 FDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFK 628

Query: 371 --RPQSTLDM-----------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
             R    L +              +Y  M+  L   G+T  A   F ++++ G    V+ 
Sbjct: 629 NGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI 688

Query: 418 NNLIRGHSKEGN-PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
             +I G     N  D A  + + +G   V         +I +  +     +AK    ++ 
Sbjct: 689 YGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATIS 748

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P  S +  ++ +L +DG V+ A+ +  SM + G+     L+ +I+  LL +G + 
Sbjct: 749 ASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIA 808

Query: 537 EA---LGRID---LMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
           +A   L ++D   +++++ +      +LS+ S KGK    +KLL
Sbjct: 809 KAGNYLSKVDGKRILLEASTT---SLMLSLFSRKGKYQEDIKLL 849



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 133/583 (22%), Positives = 253/583 (43%), Gaps = 41/583 (7%)

Query: 82  MPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
           M K+G     D+  +  +I  +  +G   ++  +F  M + GV+  V +Y+ +   + + 
Sbjct: 254 MAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKA 313

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                A+    +M ++G +P   TY+ M+ G+    +L+ A + F +MK RG+  ++VT 
Sbjct: 314 RAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTC 373

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N+ +    +  +  EA + F  M  K  +P + SY T++ GY +     D + +F+ MKS
Sbjct: 374 NSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKS 433

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             +  N   +T L+      G + +   +  EM ++ + P D   +  ++    + G L 
Sbjct: 434 NGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSP-DVVTYSTVISTFSRMGRLT 492

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A +    M+   I      Y  +I+ FC      +A +L+ +++ K I  RP       
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIP-RPDIVF--- 548

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLM----KKGVLDPVAFNNLIRGHSKEGNPDSAFE 435
              ++ +I  LC +G+   A   F        + GV   + FN+LI G+   G  D AF+
Sbjct: 549 ---FSSVINSLCKDGRVMDAHDIFDLATDIGERPGV---ITFNSLIDGYCLVGKMDKAFK 602

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           I+  M   GV  D   Y  L++ Y + G   D  T    M   G  P +  +  ++  LF
Sbjct: 603 ILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
             GR   A +    M+E G    + +   IL  L      +EA+    ++ Q     N  
Sbjct: 663 RAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI----ILFQKLGTMNVK 718

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL---NAYSIL-FK 611
             +++L+     +  V+  +               K L A ++A   L   + Y ++   
Sbjct: 719 FSITILNTMINAMYKVQRKE-------------EAKELFATISASGLLPNESTYGVMIIN 765

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           +++ GGV D   ++ + + + + G    + +L+R+IR  + +G
Sbjct: 766 LLKDGGVED---ANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 130/572 (22%), Positives = 230/572 (40%), Gaps = 50/572 (8%)

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKL 135
           CIL    + G++ D+     L++        +E+V +    M +LG   +  SY  + K 
Sbjct: 182 CIL----RTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKA 237

Query: 136 ILRRGRYMMAKRYFNKMLSEG--IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           +        A      M  +G    P    Y+ ++ GFF   +   A   F +M  +G+ 
Sbjct: 238 LCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVK 297

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DVVTYN +I+   + + MD+AE +  +M     +P  ++Y+ MI GY  + R  +A ++
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKM 357

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F EMK   + PN VT  + L  LC  G+  E  +    M  +   P D   +  LL    
Sbjct: 358 FREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKP-DIFSYCTLLHGYA 416

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
             G       +  +M    I      + ILI  + K  M D A+ +  ++         Q
Sbjct: 417 SEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM--------QQ 468

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDS 432
             +  +  +Y+ +I      G+   A   F Q++ +G+    A ++++I+G    G    
Sbjct: 469 QGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVK 528

Query: 433 AFEIVKIMGRRGVPR-DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           A E+V  M  +G+PR D   +  +I S  + G   DA    D   + G  P    F S++
Sbjct: 529 AKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLI 588

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           +     G++  A +++ +M   GV+ ++     +L+     G + + L     M + G  
Sbjct: 589 DGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVK 648

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
           PN                                  +Y  +L  L  AG+T+ A     +
Sbjct: 649 PN--------------------------------TVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           ++E G          ++ GL +     +A IL
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIIL 708



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/525 (21%), Positives = 221/525 (42%), Gaps = 30/525 (5%)

Query: 144 MAKRYFNKMLSE--GIE---PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           +A   FN++  E  G +   PT  TYN+++     + + +  +  F  +   G+ +D +T
Sbjct: 135 LALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQIT 194

Query: 199 YNTMINGYNRFKKMDEA-EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            NT++       + +EA   L   M E    P  +SY+ ++K       +  AL +   M
Sbjct: 195 ANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMM 254

Query: 258 --KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
             +     P+ V Y+ ++ G  + G+  +   +  EM  + + P D   +  ++   CK+
Sbjct: 255 AKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKP-DVVTYNLIIDALCKA 313

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
             ++ A  VL+ M       +   Y  +I  +        A K+  ++ ++ +I  P   
Sbjct: 314 RAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLI--PNIV 371

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAF 434
                 + N  +  LC +G++ +A  FF  +  KG   D  ++  L+ G++ EG      
Sbjct: 372 ------TCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMI 425

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +   M   G+  +   +  LI +Y ++G   DA      M + G SP    + +V+ + 
Sbjct: 426 GLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTF 485

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
              GR+  A      MV +G++ N  + + I++   M G + +A   +  M+  G +P  
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKG-IPRP 544

Query: 554 ----FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
               F S+++ L + G+ + A  + D          + ++  ++D     GK   A+ IL
Sbjct: 545 DIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKIL 604

Query: 610 FKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
              ME  GV  D  + + L+ G  + G       L R    EM R
Sbjct: 605 -DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFR----EMQR 644


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 153/630 (24%), Positives = 274/630 (43%), Gaps = 33/630 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMI--EILGRVGKLNHARCILLDMP------------- 83
           AL+F +WV +      D    L  I   IL R    + AR IL ++              
Sbjct: 53  ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 112

Query: 84  ---KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
               +    +  ++++LI  Y ++G++Q+S++IF +M   G   SV + +A+   +++ G
Sbjct: 113 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 172

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
             +    +  +ML   I P   T+N+++         E +    + M+  G +  +VTYN
Sbjct: 173 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 232

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++ Y +  +   A +L   MK K ++  V +Y  +I       R      +  +M+  
Sbjct: 233 TVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 292

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + PN VTY  L+ G  + GK++   ++L EM+   + P ++  F  L+      G+   
Sbjct: 293 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP-NHVTFNALIDGHISEGNFKE 351

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +   M    +      YG+L++  CK   +D A     ++    + +          
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV--------GR 403

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVK 438
            +Y  MI  LC NG   +A +   ++ K G+ DP  V ++ LI G  K G   +A EIV 
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVC 462

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            + R G+  +   Y  LI +  R G   +A    ++MI +GH+     F  ++ SL + G
Sbjct: 463 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---D 555
           +V  A   M+ M   G+  N      ++      G   +A    D M + G  P F    
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           SLL  L + G    A K L         +D   Y  +L A+  +G    A S+  +++++
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
             + D  +   LI+GL ++G T  A + ++
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAK 672



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 147/617 (23%), Positives = 279/617 (45%), Gaps = 18/617 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + +L+ FR +   G FN    T   ++  + + G+       L +M K+ +  D   F +
Sbjct: 140 QDSLEIFRLMGLYG-FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 198

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI     +G  ++S  +   M++ G   ++ +Y+ +     ++GR+  A    + M S+G
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           ++    TYN+++     S ++        DM+ R I  + VTYNT+ING++   K+  A 
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 318

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +L  EM    + P  +++  +I G+++     +AL++F  M++  + P+ V+Y  LL GL
Sbjct: 319 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   +  ++ +     ++R         +  ++   CK+G L+ A  +L  M +  I  +
Sbjct: 379 CKNAEF-DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST-LDMEASSYNPMIQHLCHNGQ 395
              Y  LI  FCK   +  A         KEI+ R     L      Y+ +I + C  G 
Sbjct: 438 IVTYSALINGFCKVGRFKTA---------KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488

Query: 396 TGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A   +  ++ +G   D   FN L+    K G    A E ++ M   G+  +  ++ C
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI  Y   GE   A +  D M + GH P    + S+++ L + G ++ A + +KS+    
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
              +  +   +L A+   G++ +A+     M+Q   +P+   + SL+S L  KGKT+ A+
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 572 KLLDFCLGRDCII-DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
                   R  ++ +   Y   +D +  AG+         ++   G   D  +++ +I G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 631 LNQEGNT-KQADILSRM 646
            ++ G   K  D+L  M
Sbjct: 729 YSRMGKIEKTNDLLPEM 745



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 143/640 (22%), Positives = 274/640 (42%), Gaps = 55/640 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L R  ++     +L DM K+ +  +E  +  LI  +  +G V  + ++ 
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M   G+  +  +++AL    +  G +  A + F  M ++G+ P+  +Y V+L G   +
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 381

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + + A  F+  MK  G+ +  +TY  MI+G  +   +DEA  L  EM +  I+P +++Y
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I G+  V R   A  I   +    + PN + Y+ L+   C  G + E  ++   M+ 
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
                +D+  F  L+   CK+G +  A + ++ M    I      +  LI  +  +    
Sbjct: 502 EG-HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 560

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLD 413
           +A  + D++ +    +    T      +Y  +++ LC  G   +AE F + L      +D
Sbjct: 561 KAFSVFDEMTK----VGHHPTF----FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 612

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP-------- 465
            V +N L+    K GN   A  +   M +R +  D+  Y  LI    RKG+         
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 672

Query: 466 -ADAK-----------TALDSMIEDGHSPASSLFRSVMESLFED---------------- 497
            A+A+             +D M + G   A   FR  M++L                   
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G+++  + ++  M  +    NL     +L     R  V  +      ++ +G +P+    
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            SL+  + E       +K+L   + R   +D  ++  ++    A G+   A+  L K+M 
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD-LVKVMT 851

Query: 615 KGGVT-DWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
             G++ D  + D +++ LN+    ++    SRM+  EMS+
Sbjct: 852 SLGISLDKDTCDAMVSVLNRNHRFQE----SRMVLHEMSK 887



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 154/702 (21%), Positives = 282/702 (40%), Gaps = 74/702 (10%)

Query: 33   AKNSEHALQ--FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
             KN+E  L   F+  ++R G+    R T+  MI+ L + G L+ A  +L +M K G+  D
Sbjct: 379  CKNAEFDLARGFYMRMKRNGVC-VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 91   EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
               +  LI  + K G  + + +I   + ++G+  +   Y  L     R G    A R + 
Sbjct: 438  IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 151  KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
             M+ EG      T+NV++     + K+  A  F   M S GI  + V+++ +INGY    
Sbjct: 498  AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557

Query: 211  KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
            +  +A  +F EM +    PT  +Y +++KG        +A +    + +     + V Y 
Sbjct: 558  EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617

Query: 271  ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK-AMI 329
             LL  +C +G + +   +  EMV+R I P D+  +  L+   C+ G    A    K A  
Sbjct: 618  TLLTAMCKSGNLAKAVSLFGEMVQRSILP-DSYTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 330  RLSIPTEAGHYGILIENFCKAEMYDRAIKL---LDKLVEKEIILRPQSTLDMEA------ 380
            R ++      Y   ++   KA  +   I     +D L     I+   + +D  +      
Sbjct: 677  RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736

Query: 381  ------------------SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL---------- 412
                              ++YN ++           + + +R ++  G+L          
Sbjct: 737  KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796

Query: 413  --------------------------DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
                                      D   FN LI      G  + AF++VK+M   G+ 
Sbjct: 797  LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 856

Query: 447  RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
             D D    ++    R     +++  L  M + G SP S  +  ++  L   G ++TA  V
Sbjct: 857  LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 916

Query: 507  MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSE 563
             + M+   +       + ++ AL   G  +EA   +  M++   VP   +F +L+ +  +
Sbjct: 917  KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 976

Query: 564  KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
             G  I A++L          +DL SY  ++  L A G    A+ +  ++   G + +  +
Sbjct: 977  NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATT 1036

Query: 624  SDKLIAG-LNQEGNTKQADILSR--MIRGEMSRGSQKEKKQK 662
               LI G L +E     ADI+ +  + RG ++  S  +   +
Sbjct: 1037 YKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSHR 1078


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 243/511 (47%), Gaps = 31/511 (6%)

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M+  G+ P  +TYN+++       +LE A+    DM+  G + + VTYNT++  + R  +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 212 MDEAEKLFAEMKEK-NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +D AE++ + M+E+ N +P ++++ +M+ G     R + A ++FDEM    + P+ V+Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            LL G C  G + E   V  EM +R + P D   F  L+   CK+G+L  A  ++  M  
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVP-DVVTFTSLIHATCKAGNLEQAVALVAQMRE 179

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +      +  LI+ FCK    D A+  ++++  ++  ++P          YN +I   
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM--RKCGIQPSVV------CYNALINGY 231

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C  G+   A    R++  K V  D V ++ +I G+ K GN DSAF++ + M ++GV  DA
Sbjct: 232 CKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA 291

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  LI     +    DA    ++M++ G  P    + ++++   ++G V+ A  +   
Sbjct: 292 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 351

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M+ KGV  ++   + ++  L      +EA   +  +     VP+   +D+L+   S K +
Sbjct: 352 MIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS-KAE 410

Query: 567 TIAAVKLL-DFC---------------LGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
             + V LL  FC               L R+  +D + Y  ++      G    A S   
Sbjct: 411 FKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHK 470

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           +++  G   +  S+  L+ GL +EG   +AD
Sbjct: 471 QMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 261/545 (47%), Gaps = 38/545 (6%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + GV  +   + +L+ +   +G ++E+V +   M+  G   +  +Y+ L     R G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 142 YMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
              A+R  + M  EG  +P   T+N M+ G   + ++E A + F++M   G++ DVV+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++GY +   + E+  +F+EM ++ + P V+++T++I         + A+ +  +M+  
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            ++ N VT+TAL+ G C  G + +    + EM +  I P     +  L+   CK G ++ 
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS-VVCYNALINGYCKLGRMDL 239

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A ++++ M    +  +   Y  +I  +CK    D A +L  K+++K ++  P      +A
Sbjct: 240 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL--P------DA 291

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y+ +I+ LC   +   A   F  +++ GV  D   +  LI GH KEGN + A  +   
Sbjct: 292 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 351

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP------------ASSLF 487
           M R+GV  D   Y  LI    +     +A   L  +  +   P            + + F
Sbjct: 352 MIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEF 411

Query: 488 RSV---MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
           +SV   ++     G ++ A +V +SM+++  K +  + + ++      G+V +AL     
Sbjct: 412 KSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQ 471

Query: 545 MMQSGSVPNFDSLLSV---LSEKGKTIAA----VKLLDFCLGRD-----CIIDLASYEKV 592
           M++SG  PN  S +S+   L E+G  + A      LL  C   D      +IDL   E  
Sbjct: 472 MLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGN 531

Query: 593 LDALL 597
           +DAL+
Sbjct: 532 VDALI 536



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 220/468 (47%), Gaps = 13/468 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   M+  L + G++  AR +  +M ++G+  D   +  L+  Y K G + ES+ +F  M
Sbjct: 83  TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 142

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            Q G+   V ++ +L     + G    A     +M   G+     T+  ++ GF     L
Sbjct: 143 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 202

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+   E+M+  GI   VV YN +INGY +  +MD A +L  EM+ K ++P V++Y+T+
Sbjct: 203 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 262

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY  V   D A ++  +M    V P+A+TY++L+ GLC+  ++ +  ++   M++  +
Sbjct: 263 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 322

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  L+   CK G++  A  +   MIR  +  +   Y +LI    K+     A 
Sbjct: 323 QP-DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381

Query: 358 KLLDKLVEKEIILRPQS---------TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +LL KL  ++ +  P +             E  S   +++  C  G   +A+  ++ ++ 
Sbjct: 382 RLLFKLYHEDPV--PDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 439

Query: 409 KG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +   LD   ++ LI GH + GN   A    K M R G   ++ + I L+     +G   +
Sbjct: 440 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 499

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           A  A+  ++       +   +++++   ++G V     V+  M   G+
Sbjct: 500 ADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGL 547



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 208/447 (46%), Gaps = 31/447 (6%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           +L  F  + + GL   D  T   +I    + G L  A  ++  M ++G++ +E  F  LI
Sbjct: 135 SLAVFSEMTQRGLV-PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 193

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + + KKG + +++   + M++ G++ SV  Y+AL     + GR  +A+    +M ++ ++
Sbjct: 194 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 253

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TY+ ++ G+     L++A +  + M  +G+  D +TY+++I G    K++++A +L
Sbjct: 254 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 313

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M +  ++P   +YTT+I G+      + AL + DEM    V P+ VTY+ L+ GL  
Sbjct: 314 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 373

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           + +  E  ++L ++     P  DN  +  L+ + C      +   +LK            
Sbjct: 374 SARTKEAHRLLFKLYHED-PVPDNIKYDALM-LCCSKAEFKSVVALLKG----------- 420

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
                   FC   +   A K+   ++++           ++ S Y+ +I   C  G   K
Sbjct: 421 --------FCMKGLMKEADKVYQSMLDR--------NWKLDGSVYSILIHGHCRGGNVRK 464

Query: 399 AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A  F +Q+++ G   +  +  +L+RG  +EG    A   ++ +       DA+A   LI+
Sbjct: 465 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 524

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPAS 484
              ++G        L  M  DG  P+S
Sbjct: 525 LNRKEGNVDALIDVLCGMARDGLLPSS 551



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 51/321 (15%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           ++G+++ AR ++ +M  K V+ D   +  +I  Y K G +  + ++   M + GV     
Sbjct: 233 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 292

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y +L + +    R   A   F  ML  G++P   TY  ++ G      +E A+   ++M
Sbjct: 293 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352

Query: 188 KSRGISLDVVTYNTMINGYNR-------------------------------------FK 210
             +G+  DVVTY+ +ING ++                                     FK
Sbjct: 353 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 412

Query: 211 K-------------MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
                         M EA+K++  M ++N +     Y+ +I G+        AL    +M
Sbjct: 413 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 472

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
                 PN+ +  +L+ GL + G +VE    +++++    P  D      L+ +  K G+
Sbjct: 473 LRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT-CCPLADAEASKALIDLNRKEGN 531

Query: 318 LNAAADVLKAMIRLSIPTEAG 338
           ++A  DVL  M R  +   +G
Sbjct: 532 VDALIDVLCGMARDGLLPSSG 552



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 4/178 (2%)

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+  G +P    +  ++ +L   GR++ A  V+  M   G   N      ++ A    G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 535 VEEALGRIDLMMQSGSV-PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
           ++ A   + LM + G+  PN   F+S+++ L + G+   A K+ D  +      D+ SY 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
            +L      G    + ++  ++ ++G V D  +   LI    + GN +QA  L   +R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 136/588 (23%), Positives = 260/588 (44%), Gaps = 39/588 (6%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           DR T+  +I    R+G+L H   +   + K G + +  +F  L++       + E+  I 
Sbjct: 194 DRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNIL 253

Query: 115 DI-MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE---GIEPTRHTYNVMLWG 170
              M + G   +V SY+ L K      R   A    + M  +      P   +YN ++ G
Sbjct: 254 LWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVING 313

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           FF   +++ A   F  M  RGI  DVVTYNT+I+G  + + +D A+ +F +M +K ++P+
Sbjct: 314 FFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPS 373

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
             +Y  +I GY++  +  + +R+ +EM + D++P+   Y  LL  LC  G+  E + +  
Sbjct: 374 NGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFD 433

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            ++ + I P                  ++ A  +   M +  +     +YG LI+  CK 
Sbjct: 434 SVIRKGIKP---------------DAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKL 478

Query: 351 EMYDRAIKLLDKLV---------------EKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
              D AI   ++++               E+ +       + ++   +N ++  LC  G+
Sbjct: 479 GRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGR 538

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A+     +++ GV  D +++N L+ GH   G  D A +++ +M   G+  +   Y  
Sbjct: 539 VMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNT 598

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           L+  Y +     DA + L  M+ +G +P    + +++  LF+ GR   A  +  +M+   
Sbjct: 599 LLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSR 658

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAV 571
            + ++     IL  L     V+EA      +   G    +  F+ ++  L + GK   A+
Sbjct: 659 TQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAM 718

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            L         + D+ +Y  + + L+  G +L    +LF  ME+ G  
Sbjct: 719 DLFATISAYGLVPDVETYCLIAENLIKEG-SLEELGVLFSAMEENGTA 765



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/551 (22%), Positives = 251/551 (45%), Gaps = 54/551 (9%)

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILR-RGRY-----MMAKRYFNKML---SEGIE 158
            +++K+FD++       SV +++ L   + R  GR+      +    F++M+   S+ + 
Sbjct: 133 HDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVA 192

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK- 217
           P R TY++++  F    +LE     F  +   G  ++ + +N ++ G    K++DEA   
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM---KSFDVKPNAVTYTALLP 274
           L   M E    P V+SY T++KG+    RA++AL +   M   +     P+ V+Y  ++ 
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G    G++ +   +  +M++R IPP D   +  ++   CK+  ++ A  V + M+   + 
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPP-DVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVK 371

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS--YNPMIQHLCH 392
              G Y  LI  +     +   ++LL+++          ST D+E     Y  ++ +LC 
Sbjct: 372 PSNGTYNCLIHGYLSTGKWKEVVRLLEEM----------STHDLEPDCFIYALLLDYLCK 421

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           NG+  +A   F  +++KG+               +   D A  I   M ++G+  +   Y
Sbjct: 422 NGRCTEARNIFDSVIRKGI-------------KPDAMIDEAVCIFDKMRQQGLSPNVVNY 468

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI++  + G   DA    + MI + +             L    + + A  ++  M++
Sbjct: 469 GALIDALCKLGRVDDAILKFNQMINEVY------------GLCTVEKWEKAEELVFEMLD 516

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           +G++ ++ +   ++  L   G V EA   I+LM++ G  P+   +++L+      G+T  
Sbjct: 517 QGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDE 576

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A KLLD  +      +  +Y  +L     A +  +AYS+L +++  G   D  + + ++ 
Sbjct: 577 AAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILH 636

Query: 630 GLNQEGNTKQA 640
           GL Q G   +A
Sbjct: 637 GLFQTGRFSEA 647



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 130/569 (22%), Positives = 236/569 (41%), Gaps = 65/569 (11%)

Query: 37  EHALQFFRWVERAGLFNHDRETHL---KMIEILGRVGKLNHARCILL-DMPKKGVQWDED 92
           EH    F  + + G     R  H+   ++++ L    +L+ A  ILL  MP+ G   +  
Sbjct: 212 EHGFAVFGLILKTGW----RVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVV 267

Query: 93  MFEVLIESYGKKGIVQESVKIFDIM---KQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
            +  L++ +  +   +E++++  +M   + L     V SY+ +     R G+   A   F
Sbjct: 268 SYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLF 327

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
            +M+  GI P   TYN ++ G   +  ++ A   F+ M  +G+     TYN +I+GY   
Sbjct: 328 LQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLST 387

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMI---------------------KGYVAVERAD 248
            K  E  +L  EM   ++EP    Y  ++                     KG       D
Sbjct: 388 GKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMID 447

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK-----------------MVEVQK---- 287
           +A+ IFD+M+   + PN V Y AL+  LC  G+                 +  V+K    
Sbjct: 448 EAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKA 507

Query: 288 --VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
             ++ EM+++ I   D  VF  L+   C+ G +  A  +++ M+R+ +  +   Y  L++
Sbjct: 508 EELVFEMLDQGIR-LDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVD 566

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             C     D A KLLD +V   I L+P         +YN ++   C   +   A    R+
Sbjct: 567 GHCLTGRTDEAAKLLDVMVS--IGLKPNEF------TYNTLLHGYCKARRIDDAYSLLRE 618

Query: 406 LMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           ++  G   D V +N ++ G  + G    A E+   M       D   Y  ++    +   
Sbjct: 619 MLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNC 678

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +A     S+   G       F  ++ +L + G+ + A  +  ++   G+  +++    
Sbjct: 679 VDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCL 738

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           I E L+  G +EE       M ++G+ PN
Sbjct: 739 IAENLIKEGSLEELGVLFSAMEENGTAPN 767



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 143/319 (44%), Gaps = 2/319 (0%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L  V K   A  ++ +M  +G++ D  +F  L+    ++G V E+ ++ ++M ++GV   
Sbjct: 498 LCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPD 557

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V SY+ L       GR   A +  + M+S G++P   TYN +L G+  + +++ A     
Sbjct: 558 VISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLR 617

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M   G + DVVTYNT+++G  +  +  EA++L+  M     +  + +Y  ++ G     
Sbjct: 618 EMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNN 677

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             D+A ++F  + S  ++ + +T+  ++  L   GK  +   +   +    + P D   +
Sbjct: 678 CVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVP-DVETY 736

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             +     K G L     +  AM        +     L+  F       RA   L KL E
Sbjct: 737 CLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDE 796

Query: 366 KEIILRPQSTLDMEASSYN 384
           K   L   ST  M  S Y+
Sbjct: 797 KNFSLE-ASTASMLISLYS 814



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 136/300 (45%), Gaps = 7/300 (2%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L R G++  A+ ++  M + GV+ D   +  L++ +   G   E+ K+ D+M  +G++ +
Sbjct: 533 LCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPN 592

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y+ L     +  R   A     +ML  G  P   TYN +L G F + +   A   + 
Sbjct: 593 EFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYL 652

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M +     D+ TYN ++NG  +   +DEA K+F  +  K ++  +I++  MI   +   
Sbjct: 653 NMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGG 712

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD---N 302
           + +DA+ +F  + ++ + P+  TY  +   L   G + E+  +   M E    P     N
Sbjct: 713 KKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLN 772

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           ++  + L      G ++ A   L  +   +   EA    +LI  + + E    A  L +K
Sbjct: 773 ALVRRFL----HRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSLPEK 828



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/223 (20%), Positives = 94/223 (42%), Gaps = 5/223 (2%)

Query: 23  HNLVYN-VLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           +   YN +LHG   A+  + A    R +   G    D  T+  ++  L + G+ + A+ +
Sbjct: 592 NEFTYNTLLHGYCKARRIDDAYSLLREMLMNGP-TPDVVTYNTILHGLFQTGRFSEAKEL 650

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
            L+M     QWD   + +++    K   V E+ K+F  +   G++  + +++ +   +L+
Sbjct: 651 YLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLK 710

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G+   A   F  + + G+ P   TY ++         LE     F  M+  G + +   
Sbjct: 711 GGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRM 770

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            N ++  +     +  A    +++ EKN      + + +I  Y
Sbjct: 771 LNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLY 813


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 218/467 (46%), Gaps = 45/467 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R+  ++ A  ++  M K G+Q D   F  LI     +G ++E+V +F+ M   G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E +V SY+ +   + + G  +MA R F KM     +P   TYN ++        +  A+
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE-------------------- 221
            F  +M  RGI  DVVTYNT+++G+    +++EA +LF E                    
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 222 ---------------MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
                          M EK  EP   +Y  ++ GY    + D+A+++   M      PN 
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            +Y  L+ G C + +M E +++L EM E+ + P D   +  L+   C+ G    A ++ K
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTP-DTVTYSTLMQGLCQVGRPREALNLFK 435

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M    +  +   Y IL++ FCK    D A+KLL ++ E+ I  +P   L      Y  +
Sbjct: 436 EMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI--KPNIIL------YTIL 487

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I+ +   G+   A+  F +L   G+  D   +N +I+G  KEG  D A+E  + M   G 
Sbjct: 488 IRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGF 547

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
             D+ +Y  +I+ +L+  + + A   +D M+    S  SS F+ +++
Sbjct: 548 LPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 233/505 (46%), Gaps = 13/505 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F   + S  KK     +V + + M   GV  +V S + L   + R      A     KM 
Sbjct: 99  FGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMF 158

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             GI+P   T+N ++ G     K++ A+  F +M   G   +V++YNT+ING  +     
Sbjct: 159 KLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTI 218

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A ++F +M++   +P V++Y T+I         ++A+    EM    + P+ VTY  +L
Sbjct: 219 MAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTIL 278

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  G++ E  ++ +EMV R + P D   F  L+   CK G ++ A  V + M     
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMP-DTVTFNILVDGLCKEGMVSEARCVSETMTEKGA 337

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
              A  Y  L++ +C     D AIK+L  ++ K     P        SSYN +I   C +
Sbjct: 338 EPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC--APN------LSSYNILINGYCKS 389

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A+    ++ +K +  D V ++ L++G  + G P  A  + K M   G+  D  AY
Sbjct: 390 KRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAY 449

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L++ + + G   +A   L  M E    P   L+  ++  +F  G+++ A  +   +  
Sbjct: 450 SILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSA 509

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G++ ++     +++ LL  G  +EA      M   G +P+   ++ ++    +   +  
Sbjct: 510 DGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSST 569

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLD 594
           A++L+D  +G+    D ++++ +LD
Sbjct: 570 AIQLIDEMVGKRFSADSSTFQMLLD 594



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 219/462 (47%), Gaps = 10/462 (2%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           GV  +     VLI    +   V  +V +   M +LG++    +++ L   +   G+   A
Sbjct: 126 GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEA 185

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
              FN+M+  G EP   +YN ++ G   +     A+R F  M+      +VVTYNT+I+ 
Sbjct: 186 VGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDS 245

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             + + ++EA +  +EM ++ I P V++Y T++ G+ ++ + ++A R+F EM   +V P+
Sbjct: 246 LCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            VT+  L+ GLC  G + E + V   M E+   P +   +  L+   C    ++ A  VL
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP-NAYTYNALMDGYCLHNQMDEAIKVL 364

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             MI          Y ILI  +CK++  + A +LL ++ EK   L P +       +Y+ 
Sbjct: 365 GIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN--LTPDTV------TYST 416

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++Q LC  G+  +A   F+++   G+L D +A++ L+ G  K G+ D A +++K M  R 
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +  +   Y  LI      G+   AK     +  DG  P    +  +++ L ++G    A 
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
              + M + G   +      I++  L       A+  ID M+
Sbjct: 537 EFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMV 578



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 216/472 (45%), Gaps = 19/472 (4%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +  +A+     M   G++ +V + N +IN   R   +D A  +  +M +  I+P  I++ 
Sbjct: 111 QYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFN 170

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           T+I G     +  +A+ +F+EM     +PN ++Y  ++ GLC  G  +   +V R+M + 
Sbjct: 171 TLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQN 230

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P +   +  ++   CK   +N A + L  M+   IP +   Y  ++  FC     + 
Sbjct: 231 RGKP-NVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNE 289

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           A +L  ++V + ++  P +       ++N ++  LC  G   +A      + +KG  +P 
Sbjct: 290 ATRLFKEMVGRNVM--PDTV------TFNILVDGLCKEGMVSEARCVSETMTEKGA-EPN 340

Query: 416 A--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           A  +N L+ G+      D A +++ IM  +G   +  +Y  LI  Y +     +AK  L 
Sbjct: 341 AYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLS 400

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M E   +P +  + ++M+ L + GR + A  + K M   G+  +L   + +L+     G
Sbjct: 401 EMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHG 460

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAA----VKLLDFCLGRDCI-IDLAS 588
           H++EAL  +  M +    PN   +L  +  +G  IA      K L   L  D I  D+ +
Sbjct: 461 HLDEALKLLKEMHERRIKPNI--ILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWT 518

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           Y  ++  LL  G +  AY    K+ + G + D  S + +I G  Q  ++  A
Sbjct: 519 YNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTA 570



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 213/459 (46%), Gaps = 59/459 (12%)

Query: 3   ERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE---TH 59
           E  W+    N I        +N V N L    N+  A++ FR +E+    N  +    T+
Sbjct: 191 EMVWSGHEPNVI-------SYNTVINGLCKNGNTIMAVRVFRKMEQ----NRGKPNVVTY 239

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             +I+ L +   +N A   L +M  +G+  D   +  ++  +   G + E+ ++F  M  
Sbjct: 240 NTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVG 299

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
             V     +++ L   + + G    A+     M  +G EP  +TYN ++ G+ L  +++ 
Sbjct: 300 RNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDE 359

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           AI+    M  +G + ++ +YN +INGY + K+M+EA++L +EM EKN+ P  ++Y+T+++
Sbjct: 360 AIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQ 419

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G   V R  +AL +F EM S  + P+ + Y+ LL G C  G + E  K+L+EM ER I P
Sbjct: 420 GLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKP 479

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
             N +                                   Y ILI     A   + A +L
Sbjct: 480 --NIIL----------------------------------YTILIRGMFIAGKLEVAKEL 503

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
             KL    I  RP      +  +YN MI+ L   G + +A  FFR++   G L D  ++N
Sbjct: 504 FSKLSADGI--RP------DIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYN 555

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
            +I+G  +  +  +A +++  M  +    D+  +  L++
Sbjct: 556 VIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 207/470 (44%), Gaps = 13/470 (2%)

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           + ++ A+  F  M        VV +   +    + K+   A  L  +M    +   V S 
Sbjct: 75  ISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSL 134

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I     +   D A+ +  +M    ++P+A+T+  L+ GLC+ GK+ E   +  EMV 
Sbjct: 135 NVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVW 194

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P   S    + G+ CK+G+   A  V + M +         Y  +I++ CK  + +
Sbjct: 195 SGHEPNVISYNTVINGL-CKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN 253

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A++ L ++V++ I   P   +     +YN ++   C  GQ  +A   F++++ + V+ D
Sbjct: 254 EAVEFLSEMVDRGI---PPDVV-----TYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V FN L+ G  KEG    A  + + M  +G   +A  Y  L++ Y    +  +A   L 
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            MI  G +P  S +  ++    +  R+  A R++  M EK +  +    + +++ L   G
Sbjct: 366 IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
              EAL     M  SG +P+   +  LL    + G    A+KLL     R    ++  Y 
Sbjct: 426 RPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYT 485

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            ++  +  AGK   A  +  K+   G   D  + + +I GL +EG + +A
Sbjct: 486 ILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEA 535


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 235/497 (47%), Gaps = 13/497 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G+  +   + +LI  + ++  +  ++ +   M +LG E S+ +  +L        R
Sbjct: 36  MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A    ++M+  G  P   T+  ++ G FL  K   A+   + M  RG   ++VTY  
Sbjct: 96  ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++NG  +   +D A  L  +M+   IE  V+ + T+I         DDAL +F EM++  
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           ++PN VTY++L+  LC  G+  +  ++L +M+E+ I P +   F  L+    K G    A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP-NLVTFNALIDAFVKEGKFVEA 274

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   MI+ SI  +   Y  LI  FC  +  D+A ++ + +V K+    P      +  
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF--P------DLD 326

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +I+  C + +       FR++  +G++ D V +  LI+G   +G+ D+A ++ K M
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              GVP D   Y  L++     G+   A    D M +        ++ +++E + + G+V
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
                +  S+  KGVK N+     ++  L  +  ++EA   +  M + G +P+   +++L
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506

Query: 558 LSVLSEKGKTIAAVKLL 574
           +      G   A+ +L+
Sbjct: 507 IRAHLRDGDKAASAELI 523



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 210/441 (47%), Gaps = 13/441 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            L++ +    K SE      R V+R    N    T+  ++  L + G ++ A  +L  M 
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPN--LVTYGVVVNGLCKRGDIDLAFNLLNKME 177

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
              ++ D  +F  +I+S  K   V +++ +F  M+  G+  +V +Y +L   +   GR+ 
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A +  + M+ + I P   T+N ++  F    K   A +  +DM  R I  D+ TYN++I
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG+    ++D+A+++F  M  K+  P + +Y T+IKG+   +R +D   +F EM    + 
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            + VTYT L+ GL   G     QKV ++MV   +PP D   +  LL   C +G L  A +
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTYSILLDGLCNNGKLEKALE 416

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V   M +  I  +   Y  +IE  CKA   D    L   L  K +  +P         +Y
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV--KPN------VVTY 468

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N MI  LC      +A    +++ + G L D   +N LIR H ++G+  ++ E+++ M  
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528

Query: 443 RGVPRDADAYICLIESYLRKG 463
                DA + I L+ + L  G
Sbjct: 529 CRFVGDA-STIGLVANMLHDG 548



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 228/503 (45%), Gaps = 11/503 (2%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           K R L   F+ N + + +   K  +  +     ++R G+ +H+  T+  +I    R  ++
Sbjct: 3   KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI-SHNLYTYNILINCFCRRSQI 61

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  +L  M K G +        L+  Y     + ++V + D M ++G      ++  L
Sbjct: 62  SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              +    +   A    ++M+  G +P   TY V++ G      ++ A      M++  I
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             DVV +NT+I+   +++ +D+A  LF EM+ K I P V++Y+++I    +  R  DA +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +  +M    + PN VT+ AL+      GK VE +K+  +M++R I P D   +  L+   
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP-DIFTYNSLINGF 300

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           C    L+ A  + + M+      +   Y  LI+ FCK++  +   +L  ++  + ++   
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV--- 357

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
                 +  +Y  +IQ L H+G    A+  F+Q++  GV  D + ++ L+ G    G  +
Sbjct: 358 -----GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A E+   M +  +  D   Y  +IE   + G+  D      S+   G  P    + +++
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472

Query: 492 ESLFEDGRVQTASRVMKSMVEKG 514
             L     +Q A  ++K M E G
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDG 495



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 217/509 (42%), Gaps = 44/509 (8%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+  ++ L   I +  ++ +      KM   GI    +TYN+++  F    ++  A+   
Sbjct: 9   SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
             M   G    +VT ++++NGY   K++ +A  L  +M E    P  I++TT+I G    
Sbjct: 69  GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            +A +A+ + D M     +PN VTY  ++ GLC  G +     +L +M    I   D  +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA-DVVI 187

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           F  ++   CK  H++ A ++ K M    I      Y  LI   C    +  A +LL  ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIR 422
           EK+I   P         ++N +I      G+  +AE     ++K+ + DP    +N+LI 
Sbjct: 248 EKKI--NPNLV------TFNALIDAFVKEGKFVEAEKLHDDMIKRSI-DPDIFTYNSLIN 298

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G       D A ++ + M  +    D D Y  LI+ + +     D       M   G   
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            +  + ++++ LF DG    A +V K MV  GV  ++   + +L+ L   G +E+AL   
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418

Query: 543 DLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           D M +S                      +KL           D+  Y  +++ +  AGK 
Sbjct: 419 DYMQKS---------------------EIKL-----------DIYIYTTMIEGMCKAGKV 446

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            + + +   +  KG   +  + + +I+GL
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGL 475



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 6/241 (2%)

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN L+   +K    D    + + M R G+  +   Y  LI  + R+ + + A   L  M+
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           + G+ P+     S++       R+  A  ++  MVE G + +      ++  L +     
Sbjct: 73  KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA+  +D M+Q G  PN   +  +++ L ++G    A  LL+         D+  +  ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192

Query: 594 DALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGEM 651
           D+L       +A + LFK ME  G+  +  +   LI+ L   G    A  +LS MI  ++
Sbjct: 193 DSLCKYRHVDDALN-LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251

Query: 652 S 652
           +
Sbjct: 252 N 252


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 149/632 (23%), Positives = 277/632 (43%), Gaps = 53/632 (8%)

Query: 48  RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV 107
           RAG F  D   +   +    R G L HA  + + MP +G       +  L+      G+V
Sbjct: 100 RAG-FAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMV 158

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
           +E++ +F  M+  G       Y  +   +   GR   A+   +  ++EG EP    YN +
Sbjct: 159 REAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNAL 218

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           + G+     LE A+  FE M   G S +V TY  +I+G+ + +K+D A  LF+ M +  +
Sbjct: 219 IDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGL 278

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P V++YT +I+G  +  + D A R+   M++  + PN  T + L+  LC   ++ E Q 
Sbjct: 279 VPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQL 338

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +L  ++++ I   +  V+  L+   CK+G   AA  +++ ++      +A  Y  LI+  
Sbjct: 339 LLGSLIQKGI-KVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGL 397

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRP---------------------------QSTLDMEA 380
           C+ +    A+ +LD ++EK +   P                            + +  + 
Sbjct: 398 CRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDV 457

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y   ++  CH G+   AE     ++  GV  + V +N LI G++  G    AF   K 
Sbjct: 458 FTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKH 517

Query: 440 MGRRGVPRDADAYICLIESYLRKGE----PADAKTA------------LDSMIEDGHSPA 483
           M   G   + ++Y  L+   ++K      PA++ +             L+ M++      
Sbjct: 518 MVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSE 577

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
             ++   + SL    R+  A  ++  M    +  + D+   I+        + EAL  +D
Sbjct: 578 IDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVD 637

Query: 544 LMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M++SG +P  +S   ++S L E+G    A ++    L ++   +  ++  ++D LL  G
Sbjct: 638 SMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKG 697

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
                 S+L  + EK    +++ SD L A L 
Sbjct: 698 YVAECSSLLSVMEEK----NYRPSDALYARLT 725



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 207/474 (43%), Gaps = 10/474 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I      G L  ++  L  + + G   D   +   +  Y + G++  + ++F +M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G  R+  +Y AL   +   G    A   F  M ++G  P  H Y  M+ G   + + 
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A     D  + G   +VV YN +I+GY     ++ A  +F  M      P V +YT +
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G+    + D A+ +F  M    + PN VTYTAL+ G C  G++    ++L+ M    +
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P + +  + L+   CK   +  A  +L ++I+  I      Y  LI+  CKA  +  A 
Sbjct: 314 VPNEWTCSV-LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAAD 372

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
           +L+  LV +  +  P      +A +Y+ +I  LC   +  +A +    +M+KGV   PV 
Sbjct: 373 RLMQTLVSQGFV--P------DAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVT 424

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  +I    +E   D + +I+  M   G+  D   Y   + SY  +G   DA+  +  M+
Sbjct: 425 YTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMV 484

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
           + G  P    + +++      G    A    K MV  G K N +    +L  L+
Sbjct: 485 DHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLI 538



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/516 (23%), Positives = 220/516 (42%), Gaps = 22/516 (4%)

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
           R++++Y  L       G    +KR+ + +L  G  P  H Y   + G+  +  L  A R 
Sbjct: 70  RNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRL 129

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  M  RG      TY  +++G      + EA  +FA M+     P    Y TM+ G   
Sbjct: 130 FVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCG 189

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             R  +A  +  +  +   +PN V Y AL+ G C+ G +     V   M      P   +
Sbjct: 190 AGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRT 249

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            + +L+   CKS  L+ A  +   M+   +      Y  LI+  C     D A +LL  +
Sbjct: 250 -YTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSM 308

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIR 422
                     S L     + + +I  LC + + G+A++    L++KG+ ++ + + +LI 
Sbjct: 309 --------ENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLID 360

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  K G   +A  +++ +  +G   DA  Y  LI+   R+ E ++A   LD M+E G  P
Sbjct: 361 GLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQP 420

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
           +   +  +++ L  +     + +++  M+  G+K ++      + +    G +E+A   +
Sbjct: 421 SPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMM 480

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             M+  G  PN   +++L+   +  G T  A       +   C  +  SY  +L  L+  
Sbjct: 481 LHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKK 540

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSD-KLIAGLNQE 634
             + N        +    V+ WK ++ K + GL +E
Sbjct: 541 ESSNN--------IPANSVSIWKIAEMKYLHGLLEE 568



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 221/487 (45%), Gaps = 29/487 (5%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A+  F  +  AGL   +  T+  +I+     G+L+ A  +L  M   G+  +E    V
Sbjct: 264 DRAMMLFSRMVDAGLVP-NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSV 322

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI++  K   V E+  +   + Q G++ +   Y +L   + + GR+  A R    ++S+G
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P  HTY+ ++ G     +L  A+   +DM  +G+    VTY  +I+   R    D ++
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSK 442

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           K+  +M    I+P V +YT  ++ Y    R +DA  +   M    V PN VTY AL+ G 
Sbjct: 443 KILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGY 502

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNS--VFMKLLGVQCKSGHLNAAA------------ 322
            + G   +     + MV     P + S  V ++LL  +  S ++ A +            
Sbjct: 503 ANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYL 562

Query: 323 -DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +L+ M++L +P+E   Y   + + C+          +D+L E +I+L    + ++  S
Sbjct: 563 HGLLEEMVKLQLPSEIDIYNCFLTSLCR----------VDRLDEAKILLIEMQSANLTPS 612

Query: 382 S--YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVK 438
              Y  +I   C      +A  F   ++K G +  + ++ ++I    +EG+  +A ++  
Sbjct: 613 EDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFG 672

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  +    +  A+  LI+  L+KG  A+  + L  M E  + P+ +L+  +   + +  
Sbjct: 673 DMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDAN 732

Query: 499 RVQTASR 505
            +Q  +R
Sbjct: 733 DIQEIAR 739



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 106/478 (22%), Positives = 210/478 (43%), Gaps = 15/478 (3%)

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           L  F ++L     +   E   SR  + ++ TY T+IN Y     +  +++  + +     
Sbjct: 44  LNAFLMALARHRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGF 103

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P   +YT+ + GY        A R+F  M        A TYTALL GLC AG + E   
Sbjct: 104 APDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMS 163

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           V   M      P D  V+  ++   C +G    A  +L   +          Y  LI+ +
Sbjct: 164 VFAGMQADGCAP-DPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGY 222

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           C     + A+ + +++          +       +Y  +I   C + +  +A + F +++
Sbjct: 223 CNVGDLELAVDVFERM--------DVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274

Query: 408 KKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYICLIESYLRKGEP 465
             G++ + V +  LI+G   +G  D A+ +++ M   G VP +    + LI++  +    
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSV-LIDALCKHERV 333

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            +A+  L S+I+ G      ++ S+++ L + GR   A R+M+++V +G   +    + +
Sbjct: 334 GEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSL 393

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAA---VKLLDFCLGRDC 582
           ++ L  +  + EA+  +D MM+ G  P+  +   ++ E  + + A    K+LD  +    
Sbjct: 394 IDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGI 453

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             D+ +Y   + +    G+  +A  ++  +++ G   +  + + LI G    G T QA
Sbjct: 454 KPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQA 511


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 155/621 (24%), Positives = 266/621 (42%), Gaps = 76/621 (12%)

Query: 4   RAWTTRLQNKIRA---LVPQFDHNLVYNVLHGAK---NSEHALQFFRWVERAGLFNHDRE 57
           R  +TR  NK RA   L P      V ++        +   AL FF WV R   F H   
Sbjct: 30  RVISTRRWNKGRAYKRLAPSVTAAHVADLFRAPVAPLDPATALAFFEWVARRPGFRHTAA 89

Query: 58  THLKMIEILGRV-------------------------------------GKLNHARCILL 80
           +H  ++++L R                                      G L  A  +L+
Sbjct: 90  SHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMREAVDAIQAIRRVGGDLRKACWLLM 149

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            MP  G + +E  + +LI+   +   V+E++ +  +M Q G   ++ +Y  L K + + G
Sbjct: 150 MMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEG 209

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A+R   +M   G+ P+  TYN M+ G+  S +++ A+     M+  G + D  TYN
Sbjct: 210 RIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYN 269

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I G    +K DEAE+L  +   +   PTVI++T +I GY   ER DDALR+   M S 
Sbjct: 270 ILIYGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSS 328

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           + K +   Y  L+  L    +  E ++ + EM    + P +  ++  ++   CK G + A
Sbjct: 329 NCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAP-NVVIYTSIIDGYCKVGKVGA 387

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII----------- 369
           A +V + M        A  Y  LI    + +   +A+ L+ K+ E  I            
Sbjct: 388 ALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQ 447

Query: 370 ----------------LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VL 412
                           +  Q+ L  +  +YN +   LC   ++G+AE  +  L++KG VL
Sbjct: 448 GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALC---KSGRAEEAYSFLVRKGVVL 504

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             V + +L+ G SK GN D A  +++ M   G   D+  Y  L+++  ++ +  +A + L
Sbjct: 505 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSIL 564

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D M   G       +  ++  + ++G+   A  +   M+  G K +       + +    
Sbjct: 565 DQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKI 624

Query: 533 GHVEEALGRIDLMMQSGSVPN 553
           G +EEA   I  M + G  P+
Sbjct: 625 GQIEEAEHLIGEMERDGVAPD 645



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 147/651 (22%), Positives = 277/651 (42%), Gaps = 58/651 (8%)

Query: 14  IRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG-K 71
           +R +VP  + +N + +    +   + AL     +ER G  N D  T+   I I G  G K
Sbjct: 223 LRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGC-NPDDWTY--NILIYGLCGEK 279

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
            + A  +L D   +G       F  +I  Y K   + +++++   M     +  +++Y  
Sbjct: 280 PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGV 339

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L  +++++ R+  AK   ++M + G+ P    Y  ++ G+    K+  A+  F  M+  G
Sbjct: 340 LINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG 399

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
              +  TY+++I G  + +K+ +A  L  +M+E  I P VI+YTT+I+G       D+A 
Sbjct: 400 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 459

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+F+ M+   + P+   Y  L   LC +G+  E    L     R         +  L+  
Sbjct: 460 RLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLV----RKGVVLTKVTYTSLVDG 515

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL-------- 363
             K+G+ + AA +++ M+      ++  Y +L++  CK +  + A+ +LD++        
Sbjct: 516 FSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCN 575

Query: 364 -VEKEIILRP------------------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
            V   II+                     S     A++Y   I   C  GQ  +AE    
Sbjct: 576 IVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIG 635

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           ++ + GV  D V +N  I G    G  D AF  +K M       +   Y  L++ +L+  
Sbjct: 636 EMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMS 695

Query: 464 ----------------EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
                           E       L+ M++ G +P +  + S++    +  R++ A  + 
Sbjct: 696 LVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLF 755

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEK 564
             M  K +  N ++   +++         +A+  +  M++ G  P+ +S   L+  L ++
Sbjct: 756 DHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDE 815

Query: 565 GKTIAAVKLLDFCLG-RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
           G    A  L    LG  D   +  +++ + D LL AG  ++  S L   ME
Sbjct: 816 GDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGH-VDFCSQLLSAME 865


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 150/600 (25%), Positives = 265/600 (44%), Gaps = 33/600 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL- 97
           A +FF+W      F H  E++  +  IL        A  +L +M     + D D+F+VL 
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLS--KADCDVFDVLW 182

Query: 98  ------IESYG----------KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
                 +  +G            G+++E+++ F  MK+  V    +S + L     + G+
Sbjct: 183 STRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGK 242

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
               KR+F  M+  G  PT  TYN+M+        +E A   FE+MK RG+  D VTYN+
Sbjct: 243 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNS 302

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           MI+G+ +  ++D+    F EMK+   EP VI+Y  +I  +    +    L  + EMK   
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           +KPN V+Y+ L+   C  G M +  K   +M    + P + + +  L+   CK G+L+ A
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT-YTSLIDANCKIGNLSDA 421

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   M+++ +      Y  LI+  C AE    A +L  K+    +I  P        +
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI--PN------LA 473

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           SYN +I          +A     +L  +G+  D + +   I G       ++A  ++  M
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  ++  Y  L+++Y + G P +    LD M E         F  +++ L ++  V
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593

Query: 501 QTASRVMKSMVEK-GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
             A      +    G++ N  +   +++ L     VE A    + M+Q G VP+   + S
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L+    ++G  + A+ L D        +DL +Y  ++  L    +   A S L +++ +G
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 224/483 (46%), Gaps = 46/483 (9%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  MI+ + + G +  AR +  +M  +G+  D   +  +I+ +GK G + ++V  F+ M
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K +  E  V +Y+AL     + G+  +   ++ +M   G++P   +Y+ ++  F     +
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383

Query: 178 ETAIRFFEDMK-----------------------------------SRGISLDVVTYNTM 202
           + AI+F+ DM+                                     G+  +VVTY  +
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G    ++M EAE+LF +M    + P + SY  +I G+V  +  D AL + +E+K   +
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS-VFMKLLGVQCKSGHLNAA 321
           KP+ + Y   + GLC   K+   + V+ EM E  I  K NS ++  L+    KSG+    
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI--KANSLIYTTLMDAYFKSGNPTEG 561

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +L  M  L I      + +LI+  CK ++  +A+   +++            L   A+
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN-------DFGLQANAA 614

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            +  MI  LC + Q   A   F Q+++KG++ D  A+ +L+ G+ K+GN   A  +   M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  D  AY  L+       +   A++ L+ MI +G  P   L  SV++  +E G +
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 734

Query: 501 QTA 503
             A
Sbjct: 735 DEA 737



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 135/281 (48%), Gaps = 6/281 (2%)

Query: 27  YNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           YN L HG   AKN + AL+    ++  G+   D   +   I  L  + K+  A+ ++ +M
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGI-KPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G++ +  ++  L+++Y K G   E + + D MK+L +E +V ++  L   + +    
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593

Query: 143 MMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             A  YFN++ ++ G++     +  M+ G     ++E A   FE M  +G+  D   Y +
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G  +   + EA  L  +M E  ++  +++YT+++ G     +   A    +EM    
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
           + P+ V   ++L    + G + E  ++   +++  +   DN
Sbjct: 714 IHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDN 754


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 145/558 (25%), Positives = 268/558 (48%), Gaps = 31/558 (5%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGL----FNHDRETHLKMIEILGRVGKL 72
             P  +  LV  V+   KN  HAL FF W          ++H    ++ + ++L   G  
Sbjct: 108 FAPFLNPXLVIQVIKSQKNPYHALFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGLF 167

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  +L    +   +  +      +++YG +G ++ ++  F   K++   R + SY+A+
Sbjct: 168 STASSLL----QSHHRLSDFAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAI 223

Query: 133 FKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
             + ++  R M+A+  F++++ EG ++P   TY  ++ G+     +E A   F++M   G
Sbjct: 224 LGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---G 280

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE-KNIEPTVISYTTMIKGYVAVERADDA 250
              ++VTYNTMING+ +   M+ A K+  +M E ++  P  ++YTT+I GY      ++A
Sbjct: 281 CKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEA 340

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN-SVFMKLL 309
           ++  +EM S + +PN +TY A++ GLC  G + E ++++  M  R    KDN +    +L
Sbjct: 341 MKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRM--RLNGLKDNVATHTSIL 398

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G L+ AA  LK M+ L +  +A  YG+++  +CK    D AI LL ++  + I 
Sbjct: 399 KGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGI- 457

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK-E 427
                  +   SS+N + + L  +G+T KA +  RQ+ + G   + ++++ +I G  K +
Sbjct: 458 -------NPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAK 510

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G      E V  M R G   DA  Y  L++ Y   G    A      M++ G+      F
Sbjct: 511 GRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESF 570

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            + ++ L    +     +  + M  +    ++    +IL+  L +       GR +    
Sbjct: 571 LAFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILDEHLCK---NLGNGRREHQQN 627

Query: 548 SGSVPNFDSLLSVLSEKG 565
           +  VP   +L+S+L+  G
Sbjct: 628 TKGVPK--TLVSILNCHG 643



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 192/463 (41%), Gaps = 93/463 (20%)

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMI 238
           AI +F   K       + +YN ++  + +  ++  A  +F ++ KE  ++P V +YTT+I
Sbjct: 201 AIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTII 260

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           +GY  +   ++A  +FDEM     KPN VTY  ++ G C  G M    K++ +M E    
Sbjct: 261 RGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTE---- 313

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
                                   D +   +          Y  LI+ +CK    + A+K
Sbjct: 314 ----------------------TEDCMPDTVT---------YTTLIDGYCKRGELEEAMK 342

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-F 417
            ++++V +          +    +YN +I  LC NG   +A+    ++   G+ D VA  
Sbjct: 343 YMEEMVSRNC--------EPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATH 394

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
            ++++G    G  D A   +K M   G+  DA AY  ++  Y + G+  DA + L  M  
Sbjct: 395 TSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKS 454

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL-------- 529
            G +P+ S F +V   L E G+   A  +++ M + G   N    + +++ L        
Sbjct: 455 RGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMH 514

Query: 530 -----------------------LMRGHVEEALGRIDL-------MMQSGSVPNFDSLLS 559
                                  L++G+ E+  G  D+       M+  G V N +S L+
Sbjct: 515 EVEEFVDDMCRNGHHLDASMYSWLVKGYCED--GNADMAMRLFCEMLDMGYVINLESFLA 572

Query: 560 V---LSEKGKTIAAVKLLDFCLGRDCI-IDLASYEKVLDALLA 598
               LS K K     K  +  + R C  ID+  Y ++LD  L 
Sbjct: 573 FVKGLSAKEKAFEVEKFFEE-MSRRCPGIDIHKYRRILDEHLC 614



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 13/296 (4%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  ++  F KA     A  + D++V KE +++P      + S+Y  +I+  C  G    A
Sbjct: 220 YNAILGVFVKANRIMLARAVFDQIV-KEGVVKP------DVSTYTTIIRGYCKMGMIENA 272

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-RGVPRDADAYICLIES 458
           +  F ++  K  L  V +N +I G  K+G  +SA +IV  M        D   Y  LI+ 
Sbjct: 273 KNVFDEMGCKPNL--VTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDG 330

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           Y ++GE  +A   ++ M+     P    + +++  L  +G V  A R+M  M   G+K+N
Sbjct: 331 YCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDN 390

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEK---GKTIAAVKLLD 575
           +     IL+ L + G +++A   +  M+  G   +  +   V++E    GK   A+ LL 
Sbjct: 391 VATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLK 450

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
               R     ++S+  V   L+ +GKT  A  IL ++ + G   ++ S   +I GL
Sbjct: 451 EMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGL 506


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 218/465 (46%), Gaps = 9/465 (1%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R G +  A  IL +M  KG   DE  +  L+  Y K+G   +++ I   M + G
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  SV +Y AL   + +      A  +F++M   G+ P   TY  ++ GF     L  A 
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R   +M   G S  VVTYN  I+G+   ++M+EA  +  EM EK + P V+SY+T+I G+
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 D A ++  EM    V P+AVTY++L+ GLC+  ++ E   + +EM++  +PP D
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP-D 528

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   C  G LN A  +   MI      +A  Y +LI    K      A +LL 
Sbjct: 529 EFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLF 588

Query: 362 KLVEKEIILRP-------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
           KL+ +E +          ++  ++E  S   +I+  C  G   +A+  F  ++++     
Sbjct: 589 KLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPG 648

Query: 415 VA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            A +N +I GH + GN   AF + K M   G        I LI++  ++G   +    + 
Sbjct: 649 EAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 708

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             +       + L + ++E   ++G ++    V+  M + G+  N
Sbjct: 709 DTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/537 (23%), Positives = 254/537 (47%), Gaps = 33/537 (6%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           AE  +   +++++   V  + +N++          +  L  F  +ER G    +  T+  
Sbjct: 198 AEEVYREMIRSRVSPNV--YTYNILIRGFCSVGELQKGLGCFGEMERNGCLP-NVVTYNT 254

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   ++G+++ A  +L  M  KG+Q +   + V+I    ++G ++E+ +I + M   G
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
                 +Y+ L     + G +  A     +M+  G+ P+  TY  ++     +  L  A+
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            FF+ M+ RG+  +  TY T+I+G++R   ++EA ++  EM E    P+V++Y   I G+
Sbjct: 375 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 434

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             +ER ++AL +  EM    + P+ V+Y+ ++ G C  G++    ++ +EMVE+ + P D
Sbjct: 435 CVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSP-D 493

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   C+   L  A D+ + M+ + +P +   Y  LI  +C     ++A+ L D
Sbjct: 494 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 553

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE-IFFRQLMKKGVLDPVAFNNL 420
           +++ K  +         +A +Y+ +I  L    +T +A+ + F+ + ++ V   V ++ L
Sbjct: 554 EMIHKGFL--------PDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 605

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I     E   +  F+ V               + LI+ +  KG   +A    +SM+E  H
Sbjct: 606 I-----ENCSNIEFKSV---------------VALIKGFCMKGLMHEADRVFESMVERNH 645

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            P  +++  ++      G +  A  + K M+  G   +   V  +++AL   G  EE
Sbjct: 646 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 702



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 227/488 (46%), Gaps = 50/488 (10%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR-RGRY-MMAKRYFN 150
           +F+++++SY    ++ ++V   ++ K  G    V SY+++   I+R RG   + A+  + 
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +M+   + P  +TYN+++ GF    +L+  +  F +M+  G   +VVTYNT+I+ Y +  
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           ++DEA  L   M  K ++P +ISY  +I G        +A  I +EM      P+ VTY 
Sbjct: 264 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 323

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM-I 329
            LL G C  G   +   +  EMV   + P     +  L+   CK+ +LN A +    M I
Sbjct: 324 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSV-VTYTALINSMCKARNLNRAMEFFDQMRI 382

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           R   P E   Y  LI+ F +  + + A ++L+++ E               S ++P +  
Sbjct: 383 RGLRPNERT-YTTLIDGFSRQGLLNEAYRILNEMTE---------------SGFSPSV-- 424

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
                                    V +N  I GH      + A  +V+ M  +G+  D 
Sbjct: 425 -------------------------VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDV 459

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
            +Y  +I  + RKGE   A      M+E G SP +  + S+++ L E  R+  A  + + 
Sbjct: 460 VSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQE 519

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M++ G+  +      ++ A  + G + +AL   D M+  G +P+   +  L++ L+++ +
Sbjct: 520 MLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQAR 579

Query: 567 TIAAVKLL 574
           T  A +LL
Sbjct: 580 TREAKRLL 587


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 162/617 (26%), Positives = 272/617 (44%), Gaps = 25/617 (4%)

Query: 16  ALVPQFDHNLVYNVLHGAK---NSEHALQFFRWVERA--GLFNHDRETHLKMIEILGRVG 70
           A V  F+H L  NV+  A+    SE A+  F  + RA       D  T+  +     R+G
Sbjct: 47  ASVRAFNHLL--NVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLG 104

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSY 129
           ++ H       + K G + +E +   L+        V E++ I    M + G   +V S 
Sbjct: 105 RIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSC 164

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           + L K +    R   A    + M  +G     P   TYN ++ G   +  ++ A    + 
Sbjct: 165 NTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQH 224

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M  +G+ LDVVTY+T+I+G  + + +D AE +   M +K ++P V++Y T+I G    + 
Sbjct: 225 MIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 284

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            D A  +   M    VKP+ VTY  ++ GLC A  +     VL+ M+++ + P D   + 
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKP-DIQTYN 343

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+     +G        L+ M    +  +   Y +L++  CK      A K+   ++ K
Sbjct: 344 CLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRK 403

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHS 425
            I  +P  T+      Y  ++      G           ++  G+  +   FN ++  ++
Sbjct: 404 GI--KPNVTI------YGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYA 455

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K+   D A  I   M + G+  D   Y  LI++  + G   DA    + MI DG +P S 
Sbjct: 456 KKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSV 515

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
           +F S++  L    R + A  +   M ++GV+ N+     I+  L   G V  A   ID M
Sbjct: 516 VFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
            + G  PN   +++L+      G+T  A +LLD  +      DL SY+ +L      G+ 
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635

Query: 603 LNAYSILFKIMEKGGVT 619
            NAY  LF+ M + GVT
Sbjct: 636 DNAYC-LFREMLRKGVT 651



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 140/617 (22%), Positives = 262/617 (42%), Gaps = 66/617 (10%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  +I+   K   V  +  +   M   GV+  V +Y  +   + +      A+     M+
Sbjct: 202 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMI 261

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G++P   TYN ++ G   +  ++ A    + M  +G+  DVVTYNT+I+G  + + +D
Sbjct: 262 DKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 321

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A+ +   M +K+++P + +Y  +I GY++     + +R  +EM +  + P+ VTY+ LL
Sbjct: 322 RADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLL 381

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPK--------------------------------- 300
             LC  GK  E +K+   M+ + I P                                  
Sbjct: 382 DYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGIS 441

Query: 301 -DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            +N +F  +L    K   ++ A  +   M +  +  +   YGILI+  CK    D A+  
Sbjct: 442 PNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLK 501

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN 419
            ++++   +   P S +      +N ++  LC   +  KAE  F ++  +GV   V F N
Sbjct: 502 FNQMINDGVT--PNSVV------FNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFN 553

Query: 420 LIRGH-SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            I  +   EG    A  ++  M R GV  +  +Y  LI  +   G   +A   LD M+  
Sbjct: 554 TIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSV 613

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P    + +++    + GR+  A  + + M+ KGV       + IL+ L       EA
Sbjct: 614 GLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEA 673

Query: 539 LGRIDLMMQSGS---VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
                 M++SG    +  ++ +L+ L +      A K+      +D   ++ ++  ++D 
Sbjct: 674 KELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDV 733

Query: 596 LLAAGKTLNA------------------YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
           L   G+  +A                  Y I+ K + + G+ D    D L   + + G T
Sbjct: 734 LFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLD--EFDNLFLAMEKSGCT 791

Query: 638 KQADILSRMIRGEMSRG 654
             + +L+ +IR  + RG
Sbjct: 792 PDSVMLNAIIRSLLGRG 808



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/568 (23%), Positives = 249/568 (43%), Gaps = 59/568 (10%)

Query: 46  VERA-GLFNH--------DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           V+RA G+  H        D  T+  +I+ L +   ++ A  +L  M  K V+ D   +  
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI  Y   G  +E V+  + M   G++  V +Y  L   + + G+   A++ F  M+ +G
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKG 404

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I+P    Y ++L G+     +       + M + GIS +   +N ++  Y +   +DEA 
Sbjct: 405 IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAM 464

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +F+ M +  + P V++Y  +I     + R DDA+  F++M +  V PN+V + +L+ GL
Sbjct: 465 HIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGL 524

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ-CKSGHLNAAADVLKAMIRLSIPT 335
           C   +  + +++  EM ++ + P  N VF   +    C  G +  A  ++ +M R+ +  
Sbjct: 525 CTVDRWEKAEELFFEMWDQGVRP--NVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRP 582

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  LI   C A   D A +LLD +V   + L+P      +  SY+ +++  C  G+
Sbjct: 583 NVISYNTLIGGHCLAGRTDEAAQLLDVMV--SVGLKP------DLISYDTLLRGYCKTGR 634

Query: 396 TGKAEIFFRQLMKKGVL------------------------------------DPVAFNN 419
              A   FR++++KGV                                     D   +N 
Sbjct: 635 IDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNI 694

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           ++ G  K    D AF+I + +  + +  +   +  +I+   + G   DA     S+   G
Sbjct: 695 ILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG 754

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA- 538
             P    +  +M+++ ++G +     +  +M + G   +  ++  I+ +LL RG +  A 
Sbjct: 755 LVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAG 814

Query: 539 --LGRIDLMMQSGSVPNFDSLLSVLSEK 564
             L +ID M  S        L+S+ S +
Sbjct: 815 AYLSKIDEMNFSLEASTTSLLISLFSRE 842



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 251/579 (43%), Gaps = 55/579 (9%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V   + +Y  L     R GR       F  +L  G        N +L G   + +++ A+
Sbjct: 86  VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145

Query: 182 R-FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK---NIEPTVISYTTM 237
                 M   G   +VV+ NT++ G    K+++EA +L   M E    N  P V++Y T+
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G    +  D A  +   M    VK + VTY+ ++ GLC A  +   + VL+ M+++ +
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV 265

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  ++   CK+  ++ A  VL+ MI   +  +   Y  +I+  CKA+  DRA 
Sbjct: 266 KP-DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--V 415
            +L  +++K++  +P      +  +YN +I      G+  +      ++  +G LDP  V
Sbjct: 325 GVLQHMIDKDV--KP------DIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG-LDPDVV 375

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            ++ L+    K G    A +I   M R+G+  +   Y  L+  Y  +G  AD    LD M
Sbjct: 376 TYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLM 435

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           + +G SP + +F  V+ +  +   +  A  +   M + G+  ++     +++AL   G V
Sbjct: 436 VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRV 495

Query: 536 EEALGRIDLMMQSGSVPN--------------------------------------FDSL 557
           ++A+ + + M+  G  PN                                      F+++
Sbjct: 496 DDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTI 555

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  L  +G+ + A +L+D         ++ SY  ++     AG+T  A  +L  ++  G 
Sbjct: 556 MCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGL 615

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADILSR-MIRGEMSRGS 655
             D  S D L+ G  + G    A  L R M+R  ++ G+
Sbjct: 616 KPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGA 654



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 7/296 (2%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G++  A+ ++  M + GV+ +   +  LI  +   G   E+ ++ D+M  +G++  + SY
Sbjct: 563 GQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISY 622

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           D L +   + GR   A   F +ML +G+ P   TY+ +L G F + +   A   + +M  
Sbjct: 623 DTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIK 682

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G   D+ TYN ++NG  +   +DEA K+F  +  K++ P +I++T MI       R  D
Sbjct: 683 SGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKD 742

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD---NSVFM 306
           A+ +F  + S  + PN VTY  ++  +   G + E   +   M +    P     N++  
Sbjct: 743 AMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIR 802

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
            LLG     G +  A   L  +  ++   EA    +LI  F + E  + A  L +K
Sbjct: 803 SLLG----RGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSLPEK 854



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 107/483 (22%), Positives = 182/483 (37%), Gaps = 113/483 (23%)

Query: 248 DDALRIFDEM---------KSFD--------------------------------VKPNA 266
           DDAL++FDE+         ++F+                                V+P+ 
Sbjct: 31  DDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDL 90

Query: 267 VTYTALLPGLCDAGK-----------------------------MVEVQKV-------LR 290
            TY+ L    C  G+                             + + ++V       LR
Sbjct: 91  CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR---LSIPTEAGHYGILIENF 347
            M E    P   S    L G+ C    +  A ++L  M      +       Y  +I+  
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGL-CNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 348 CKAEMYDRAIKLLDKLVEKEIIL-------------------RPQSTLDM--------EA 380
           CKA+  DRA  +L  +++K + L                   R +  L          + 
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +YN +I  LC      +AE   + ++ KGV  D V +N +I G  K    D A  +++ 
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  + V  D   Y CLI  YL  GE  +    L+ M   G  P    +  +++ L ++G+
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
              A ++   M+ KG+K N+ +   +L     RG + +    +DLM+ +G  PN   F+ 
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           +L   ++K     A+ +           D+ +Y  ++DAL   G+  +A  + F  M   
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAV-LKFNQMIND 508

Query: 617 GVT 619
           GVT
Sbjct: 509 GVT 511


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/650 (23%), Positives = 302/650 (46%), Gaps = 28/650 (4%)

Query: 11  QNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           Q  I+       ++++ + L   +  + A + F+ ++  G+   D  ++  +I    R G
Sbjct: 112 QYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMP-DVISYTSLIHGFCRSG 170

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           K   A+C+  +M   G++ D     +LI+   K+G V E+ ++ ++M Q G    + +Y 
Sbjct: 171 KWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYS 230

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS- 189
            L K +  + R   A R F  M   G  P    Y  ++ G   +  + TA++  ++M + 
Sbjct: 231 TLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLND 290

Query: 190 ---RGISL--DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
               GI     +++Y+ +I+G  + ++ DEA +LF EMK + I P VISYTT+I G+   
Sbjct: 291 TGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLS 350

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            + + A  +F+EM    ++P+  T + L+  LC  GK++E  K+L  +++R   P D   
Sbjct: 351 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIP-DVVT 409

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
              L+   C    ++ A  +   M +L           L++  C++     A++L   ++
Sbjct: 410 CTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML 469

Query: 365 EKE----IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
                  I  +P       A SY+ +I  LC  G+  +A   F+++   GV+ D +++ +
Sbjct: 470 SDTSPYGINCKPN------AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 523

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  + G    A  +   M   GV  D   +  LI+   ++G+  +A   L+ MI+ G
Sbjct: 524 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 583

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P +  + ++++ L  + R+  A+++   M + G   ++     +++ L   G+++ AL
Sbjct: 584 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 643

Query: 540 GRIDLMM----QSGS-----VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
                M+    Q G+     V ++  ++  L + G+   A +L         I ++ SY 
Sbjct: 644 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT 703

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            ++     +GK  +A  +  +++++G   +  +   +I G  +EG   +A
Sbjct: 704 SLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/549 (23%), Positives = 252/549 (45%), Gaps = 31/549 (5%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M  +G++  V +   L  +  + G+ + A      M+  G      TY+ ++ G  +  +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN------IEPT 230
           +  A + F  MK  G   D + Y T++ G  +  K++ A  L  EM           +PT
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           ++SY+ +I G     R D+A  +F EMK+  + P+ ++YT+L+ G C +GK  + + +  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           EM++  I   D +    L+ + CK G +  A ++L+ MI+     +   Y  LI+  C  
Sbjct: 181 EMLDVGI-RSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMK 239

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM--- 407
                A +L   +  +++  RP      +A +Y  +++ LC  G    A    ++++   
Sbjct: 240 HRISEATRLFMSM--QKLGCRP------DAIAYGTLMKGLCQTGNINTALQLHQEMLNDT 291

Query: 408 -KKGV-LDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            + G+   P  ++++ +I G  K+   D A E+ K M  +G+  D  +Y  LI  +   G
Sbjct: 292 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSG 351

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           +   AK   + M++ G  P  +    +++ L + G+V  A+++++ ++++G   ++    
Sbjct: 352 KWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCT 411

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCL-- 578
            +++ L M+  + +A      M + G +PN     +L+  L + G    A++L    L  
Sbjct: 412 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 471

Query: 579 ----GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
               G +C  +  SY  ++D L   G+   A  +  ++   G + D  S   LI G  + 
Sbjct: 472 TSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRS 531

Query: 635 GNTKQADIL 643
           G  K A  L
Sbjct: 532 GKWKDAKYL 540



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 162/711 (22%), Positives = 300/711 (42%), Gaps = 126/711 (17%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I++  + GK+  A  +L  M ++G   D   +  LI+    K  + E+ ++F
Sbjct: 9   DVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLF 68

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE----GIE--PTRHTYNVML 168
             MK+LG      +Y  L K + + G+  +A     +ML++    GI+  PT  +Y++++
Sbjct: 69  MSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIII 128

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G     + + A   F++MK++G+  DV++Y ++I+G+ R  K ++A+ LF EM +  I 
Sbjct: 129 DGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIR 188

Query: 229 PTV-----------------------------------ISYTTMIKGYVAVERADDALRI 253
             V                                   ++Y+T+IKG     R  +A R+
Sbjct: 189 SDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRL 248

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE---RY---IPPKDNSVFMK 307
           F  M+    +P+A+ Y  L+ GLC  G +    ++ +EM+    RY     P   S  + 
Sbjct: 249 FMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSII 308

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA-----------EMYDRA 356
           + G+ CK    + A ++ K M    I  +   Y  LI  FC +           EM D  
Sbjct: 309 IDGL-CKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 367

Query: 357 IK--------LLDKLVEKEIILRPQSTLDM--------EASSYNPMIQHLCHNGQTGKAE 400
           I+        L+D L +K  ++     L++        +  +   +++ LC   +  KA 
Sbjct: 368 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKAT 427

Query: 401 IFFRQLMKKGVL------------------------------------------DPVAFN 418
             F ++ K G +                                          + ++++
Sbjct: 428 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 487

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            +I G  K G  D A E+ K M   GV  D  +Y  LI  + R G+  DAK   + M++ 
Sbjct: 488 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 547

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P  + F  +++ L ++G+V  A+ +++ M+++G   N      +++ L M   + EA
Sbjct: 548 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 607

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL------GRDCIIDLASY 589
                 M + G +P+   + +L+  L + G    A++L    L      G +   D+ SY
Sbjct: 608 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 667

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             ++D L   G+   A  +  ++   G + +  S   LI G  + G  + A
Sbjct: 668 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 718



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 141/582 (24%), Positives = 274/582 (47%), Gaps = 24/582 (4%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G+Q D     VLI+ + K+G V E+ ++ ++M Q G    + +Y  L K +  + R   A
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM----KSRGISL--DVVTY 199
            + F  M   G  P    Y  ++ G   + K+  A+   ++M       GI     +V+Y
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + +I+G  + ++ DEA +LF EMK + + P VISYT++I G+    + + A  +F+EM  
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             ++ +  T + L+  LC  GK++E  ++L  M++R     D   +  L+   C    ++
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL-DIVTYSTLIKGLCMKHRIS 243

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK--EIILRPQSTLD 377
            A  +  +M +L    +A  YG L++  C+    + A++L  +++       ++ + TL 
Sbjct: 244 EATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL- 302

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
               SY+ +I  LC + +  +A   F+++  +G++ D +++  LI G    G  + A  +
Sbjct: 303 ---ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 359

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G+  D      LI+   +KG+  +A   L+ +I+ G  P      ++++ L  
Sbjct: 360 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCM 419

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV----- 551
             R+  A+++   M + G   N+   A +++ L   G+++ AL     M+   S      
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479

Query: 552 -PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
            PN   +  ++  L + G+   A +L         I D+ SY  ++     +GK  +A  
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539

Query: 608 ILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIR 648
           +  ++++ G   D  +   LI  L +EG   +A+ +L  MI+
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 581



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 258/584 (44%), Gaps = 88/584 (15%)

Query: 44  RWVERAGLFNH--------DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           +W +   LFN         D  T   +I+IL + GK+  A  +L  M ++G   D   + 
Sbjct: 171 KWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYS 230

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI+    K  + E+ ++F  M++LG      +Y  L K + + G    A +   +ML++
Sbjct: 231 TLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLND 290

Query: 156 ----GIE--PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
               GI+  PT  +Y++++ G     + + A   F++MK++GI  DV++Y T+I+G+   
Sbjct: 291 TGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLS 350

Query: 210 KKMDEAEKLFAEMKEKNIEPTV-----------------------------------ISY 234
            K ++A+ LF EM +  I+P V                                   ++ 
Sbjct: 351 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTC 410

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM---VEVQKVLRE 291
           TT++KG     R   A ++F +M+     PN VT   L+ GLC +G +   +E+ K +  
Sbjct: 411 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 470

Query: 292 MVERY-IPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
               Y I  K N++ +  ++   CK G  + A ++ K M  L +  +   Y  LI  FC+
Sbjct: 471 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 530

Query: 350 A-----------EMYDRAIK--------LLDKLVEKEIILRPQSTLDM--------EASS 382
           +           EM D  ++        L+D L ++  ++     L++           +
Sbjct: 531 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 590

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM- 440
           Y  +++ LC N +  +A   F ++ K G L D V +  L++G  + GN  +A E+ K M 
Sbjct: 591 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650

Query: 441 ---GRRGV--PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
              G+ G     D  +Y  +I+   + G   +A+     M   G  P    + S++    
Sbjct: 651 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 710

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             G+++ A  +   MV++GV+ N    + ++      G +++AL
Sbjct: 711 RSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 143/575 (24%), Positives = 263/575 (45%), Gaps = 51/575 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F +L+ ++  KG + +++     M+  G+   V +Y+ L K   R+G    A+    +M 
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            EGI PTR TYN ++  +     ++ A    E M + G   D+ TYN +  G  +  K+D
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332

Query: 214 EAEKLFAEMKEKNI-EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           EA KL  EM+  +I  P V++Y T++      +R+ DAL + +EM+   VK + VT+  +
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GLC  G++ E    L+ M E  + P                       DV+       
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAP-----------------------DVIT------ 423

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
                  Y  LI+ +CKA    +A  L+D++V        +S L M+  + N ++ +LC 
Sbjct: 424 -------YNTLIDAYCKARNVAKAFVLMDEMV--------RSGLKMDTFTLNTLLYNLCK 468

Query: 393 NGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  +AE   R   ++G V D V++  ++  + KE  P+ A  +   M +R +      
Sbjct: 469 EKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYT 528

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+     G+  +A   L+ +++ G  P  + +  ++ +  ++G ++ A +    M+
Sbjct: 529 YNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTI 568
           E   K ++     ++  L + G +E+A+   +   + G    V  +++L+  L + G   
Sbjct: 589 ENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVD 648

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A+        R    D  +Y  VL AL  AG++  A ++L K+ E G +++ + S  LI
Sbjct: 649 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSE-RFSYPLI 707

Query: 629 AGLNQEGNT-KQADILSRMIRGEMSRGSQKEKKQK 662
               +E  T K  ++ S    G  ++G  +E   K
Sbjct: 708 KSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNK 742



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 258/568 (45%), Gaps = 15/568 (2%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L  A   L  M   G+  D   +  L++++ +KG++ E+  +   MK+ G+  +  +Y
Sbjct: 224 GTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATY 283

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     R G    A      M + G EP   TYNV+  G   + K++ A +  ++M+ 
Sbjct: 284 NTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEH 343

Query: 190 RGI-SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             I S DVVTYNT+++   ++++  +A  L  EM++K ++ +++++  ++KG     + +
Sbjct: 344 LSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLE 403

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +AL     M    + P+ +TY  L+   C A  + +   ++ EMV   +   D      L
Sbjct: 404 EALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL-KMDTFTLNTL 462

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           L   CK      A ++L++  +     +   YG ++  + K    + A+ L D++ +++ 
Sbjct: 463 LYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRK- 521

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKE 427
                  L     +YN +I+ LC  G+  +A     +LMKKG V D   +N +I  + KE
Sbjct: 522 -------LTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKE 574

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G+ + AF+    M       D      L+      G+   A    +S  E G       +
Sbjct: 575 GDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITY 634

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            +++++L +DG V TA      M  +G++ +      +L AL   G  EEA   +  + +
Sbjct: 635 NTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694

Query: 548 SGSVPNFDS--LLSVLSEKGKTIAAVKLLDFCL--GRDCIIDLASYEKVLDALLAAGKTL 603
           SG +    S  L+   +E+ KT    ++   C   G     D  SY K +  L   G+  
Sbjct: 695 SGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLK 754

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            A ++L ++M+KG   D  +   L+ GL
Sbjct: 755 EAKAVLDEMMQKGMSVDSSTYITLMEGL 782



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/517 (24%), Positives = 225/517 (43%), Gaps = 51/517 (9%)

Query: 56  RETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD 115
           R T+  ++    R+G +  A  ++  M   G + D   + VL     + G V E+ K+ D
Sbjct: 280 RATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKD 339

Query: 116 IMKQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            M+ L  V   V +Y+ L     +  R   A     +M  +G++ +  T+N+++ G    
Sbjct: 340 EMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCRE 399

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK-----------------KMD---- 213
            +LE A+   + M   G++ DV+TYNT+I+ Y + +                 KMD    
Sbjct: 400 GQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTL 459

Query: 214 --------------EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
                         EAE+L     ++   P  +SY T++  Y    + + AL ++DEM  
Sbjct: 460 NTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSK 519

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+  TY  L+ GLC  GK+ E    L E++++ + P D++ +  ++   CK G L 
Sbjct: 520 RKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVP-DDTTYNIIIHAYCKEGDLE 578

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A      M+      +      L+   C     ++AIKL +   EK           ++
Sbjct: 579 KAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEK--------GKKVD 630

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NNLIRGHSKEGNPDSAFEIV 437
             +YN +IQ LC +G    A  FF  +  +G L P AF  N ++   S+ G  + A  ++
Sbjct: 631 VITYNTLIQALCKDGDVDTALHFFADMEARG-LQPDAFTYNVVLSALSEAGRSEEAQNML 689

Query: 438 KIMGRRGVPRDADAYICLIESY--LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
             +   G   +  +Y  +  S   ++ G+  + K+  +S          S  +SV E L 
Sbjct: 690 HKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKE-LC 748

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             G+++ A  V+  M++KG+  +      ++E L+ R
Sbjct: 749 VGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKR 785



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 110/509 (21%), Positives = 219/509 (43%), Gaps = 17/509 (3%)

Query: 2   AERAWTTRLQNKIRALVP-QFDHNL-VYNVLHG----AKNSEHALQFFRWVERAGLFNHD 55
           A   W  +  N + A+    F+ +L  YNVL      A   + A +    +E   + + D
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPD 350

Query: 56  RETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD 115
             T+  +++   +  + + A  +L +M  KGV+       ++++   ++G ++E++    
Sbjct: 351 VVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLK 410

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           +M + G+   V +Y+ L     +      A    ++M+  G++    T N +L+      
Sbjct: 411 MMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 470

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           + E A         RG   D V+Y T++  Y +  K + A  L+ EM ++ + P++ +Y 
Sbjct: 471 RYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYN 530

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           T+IKG   + +  +A+   +E+    + P+  TY  ++   C  G + +  +   +M+E 
Sbjct: 531 TLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLEN 590

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
           Y  P D      L+   C  G L  A  + ++        +   Y  LI+  CK    D 
Sbjct: 591 YFKP-DVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDT 649

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           A+     +  +         L  +A +YN ++  L   G++ +A+    +L + G L   
Sbjct: 650 ALHFFADMEAR--------GLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSER 701

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR--DADAYICLIESYLRKGEPADAKTALD 473
               LI+  ++E       E+       G  +  D ++Y   ++     G+  +AK  LD
Sbjct: 702 FSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLD 761

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            M++ G S  SS + ++ME L +  + QT
Sbjct: 762 EMMQKGMSVDSSTYITLMEGLIKRQKRQT 790


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/613 (22%), Positives = 284/613 (46%), Gaps = 19/613 (3%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
           +A+  FR++   G+F    +T   ++  L +  +L  +  +   M ++GV  D  +F   
Sbjct: 262 NAIGVFRFLANKGVF-PTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTA 319

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           I ++ K G V++++++F  M++LGV  +V +Y+ L   + + G    A R+  KM+ +G+
Sbjct: 320 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 379

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
             T  TY+V++ G     K   A    ++   +G + + V YNT+I+GY +   + +A +
Sbjct: 380 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 439

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM--KSFDVKPNAVTYTALLPG 275
           +  +M  K I P  ++  ++I+G+  + + + A  I +EM  + F + P A  +T ++  
Sbjct: 440 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA--FTTIIHW 497

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC   +     + LREM+ R + P D  +   L+G  CK G  + A ++   ++      
Sbjct: 498 LCMNSRFESALRFLREMLLRNMRPND-GLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA 556

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
                  LI   CK      A++LL K++E+  +L        +  +YN +I   C  G+
Sbjct: 557 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL--------DKITYNTLISGCCKEGK 608

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +      +++K+G+  D   +N LI G  + G  D A  +      R +  +   Y  
Sbjct: 609 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I+ Y +  +  + +     ++       S ++ +++ +   +G    A ++   M  KG
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 728

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           +       + ++  +   G +E+A   ID M + G +PN   + +L+    + G+    V
Sbjct: 729 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 788

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            +L      D   +  +Y  ++D    +G    A  +L +++ KG V D  + + L  G 
Sbjct: 789 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 848

Query: 632 NQEGNTKQADILS 644
            +EG  ++  +L+
Sbjct: 849 CKEGKIEEGKLLA 861



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 164/325 (50%), Gaps = 3/325 (0%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           LV  +    K+S+    +FR +E+   F  +  T   +I  L + G +  A  +L  M +
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKG--FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 586

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +G   D+  +  LI    K+G V+E  K+   M + G+E    +Y+ L   + R G+   
Sbjct: 587 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 646

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   +N+  S  + P  +TY VM+ G+  + K+E   + F ++ ++ + L+ V YNT+I 
Sbjct: 647 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 706

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            Y R     EA KL  +M+ K I PT  +Y+++I G   + R +DA  + DEM+   + P
Sbjct: 707 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 766

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N V YTAL+ G C  G+M +V  VL+EM    I P   +  + + G   KSG +  AA +
Sbjct: 767 NVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS-KSGDMKTAAKL 825

Query: 325 LKAMIRLSIPTEAGHYGILIENFCK 349
           L  M+   I  +   Y +L   FCK
Sbjct: 826 LHEMVGKGIVPDTVTYNVLTNGFCK 850



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 143/653 (21%), Positives = 285/653 (43%), Gaps = 30/653 (4%)

Query: 7   TTRLQNKIRALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           +T+ +  I  L P QFD   V+  +    N + AL FF +   +  F     ++  ++  
Sbjct: 131 STQCKQLIPHLSPHQFDS--VFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRS 188

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI-VQESVKIFDIMKQLGVER 124
           L   G ++ AR +L+ +  + +        VL      + I +  ++   + + + GV  
Sbjct: 189 LIVSGFVSPARLLLIRLIDRKL-------PVLFGDPKNRHIEIASAMADLNEVGESGV-- 239

Query: 125 SVKSYDALFKLILRRGR---YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +V + D L  +   + R   +  A   F  + ++G+ PT  T   +L     + +LE + 
Sbjct: 240 AVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSY 299

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             FE M+ +G+S DV  ++T IN + +  K+++A +LF +M++  + P V++Y  +I G 
Sbjct: 300 WVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGL 358

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 D+A R  ++M    V    +TY+ L+ GL    K  E   VL+E +E+   P +
Sbjct: 359 CKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNE 418

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             V+  L+   CK G+L  A  +   M+   I   +     +I+ FCK    ++A  +L+
Sbjct: 419 -VVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILE 477

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           +++ +   + P         ++  +I  LC N +   A  F R+++ + +  +      L
Sbjct: 478 EMLSRGFSINP--------GAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTL 529

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G  KEG    A E+   +  +G   +      LI    + G   +A   L  M+E G 
Sbjct: 530 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 589

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
                 + +++    ++G+V+   ++   MV++G++ +      ++  +   G ++EA+ 
Sbjct: 590 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVN 649

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
             +       VPN   +  ++    +  K     KL    L ++  ++   Y  ++ A  
Sbjct: 650 LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 709

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
             G T+ A+ +   +  KG      +   LI G+   G  + A  L   +R E
Sbjct: 710 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKE 762


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 153/653 (23%), Positives = 272/653 (41%), Gaps = 69/653 (10%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR---VGKLN 73
           L P+   + V N+L   KN++  L+FF W+ R   F HD    + M+  L R       +
Sbjct: 72  LSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPAD 131

Query: 74  HARCILLDMP------KKGVQWDEDM------------FEVLIESYGKKGIVQESVKIFD 115
           H R +++         K+  Q+  ++            F  L+   GK  +V  +  ++ 
Sbjct: 132 HVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYI 191

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
            M   G+  S+ +++ +  ++ ++GR   AK   + +      P   TY  ++ G   + 
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
            L+ A   F+ M   G   + VTY+T+ING     +++EA  +  EM +K IEPTV +YT
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYT 311

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
             +        + +A+ +  +MK     PN  T+TAL+ GL   GK      +  +M+  
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            + P     +  L+   C  G    A  + K M+          Y  +I+ FC      +
Sbjct: 372 GLVPT-TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQK 430

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           A+ + DK+++               SS N                              +
Sbjct: 431 AMVIFDKMLKA-------------GSSPN-----------------------------VI 448

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N LI G+ K+GN ++A  +++IM   G+  DA  Y  LI  + R G+   A +    M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +E G SP    + ++++  F   +V  A  +   MVE G   +      ++        +
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
            EA      M++ G +PN   + S +  L   G+T  A K+      R+   +L +Y  +
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628

Query: 593 LDALLAAGKTLNA--YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           +  L   G+  +A  Y++L ++   G   +  +   L+ GL  EG   +AD L
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQL 681



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 254/538 (47%), Gaps = 15/538 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L   G+L  A  +L +M +KG++     + + + S    G   E+V++   M
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+ G   +++++ AL   + R G++ +A   ++KML++G+ PT  TYN ++    +  + 
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           ETA   F+ M S G      TYN +I  +     + +A  +F +M +    P VI+Y T+
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY      ++A+R+ + MK   +KP+A TYT L+ G    GK+     +   M+E  I
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P ++  +  ++        ++ A  +   M+       +  Y ++I  F K      A 
Sbjct: 514 SP-NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-A 416
               K+V++ ++  P         +Y   I  LC NG+TG A   F ++ K+     +  
Sbjct: 573 NFCGKMVKQGLL--PN------VITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 417 FNNLIRGHSKEGNPDSA--FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           +++LI G  +EG  + A  + ++  +   G   + D Y  L++    +G   +A   + S
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M + G  P+  ++R+++    ++ +V++A  +  SM   G + +L     ++ AL     
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 535 VEEALGRIDLMMQ---SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           +EEA      M++   +     +  LL  L ++G+T   +KLL     R+C ++  +Y
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 200/447 (44%), Gaps = 20/447 (4%)

Query: 16  ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
            LVP    +N + N L      E A   F+W+   G      +T+ ++I+    +G +  
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP-STQTYNEIIKCFCLMGDIQK 430

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  I   M K G   +   +  LI  Y K+G +  ++++ +IMK  G++    +Y  L  
Sbjct: 431 AMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
              R G+   A   F  M+  GI P   TY  ++ G+F   K++ A+  F  M   G   
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLP 550

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
              TYN MI+G+++   + EAE    +M ++ + P VI+YT+ I G     R   A +IF
Sbjct: 551 SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF 610

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKM--VEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
            EM+  +  PN  TY++L+ GLC  G+    E+  +L  +      P  ++ +  L+   
Sbjct: 611 HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDT-YTTLVKGL 669

Query: 313 CKSGHLNAAADVLKAMIRLSI-PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           C  G    A  ++ +M +  + P+E  +  +LI   CK    + A+           I  
Sbjct: 670 CGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGE-CKNLKVESALN----------IFY 718

Query: 372 PQSTL--DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
              TL   +  S Y  +I  LC      +A+  F+ +++K    D VA+  L+ G  KEG
Sbjct: 719 SMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEG 778

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICL 455
             D   +++ +M  R    +   Y+ L
Sbjct: 779 ETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 203/484 (41%), Gaps = 25/484 (5%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           +T   +I  L R GK   A  +   M   G+      +  LI     +G  + +  IF  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M   G   S ++Y+ + K     G    A   F+KML  G  P   TYN +++G+     
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           L  A+R  E MK  G+  D  TY  +I+G++R  K++ A  LF  M E  I P  ++YT 
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I GY  + + DDAL +F +M      P++ TY  ++ G      + E +    +MV++ 
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK------A 350
           + P +   +   +   C++G    A  +   M + +       Y  LI   C+      A
Sbjct: 583 LLP-NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
           EMY+   +L     E  +             +Y  +++ LC  G+  +A+     + KKG
Sbjct: 642 EMYNLLARLTHYGCEPNV------------DTYTTLVKGLCGEGRCYEADQLVVSMQKKG 689

Query: 411 VLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
            L P    +  L+ G  K    +SA  I   M   G       Y  LI +  ++    +A
Sbjct: 690 -LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEA 748

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD---LVAKI 525
           +    +M+E   +     +  +++ L ++G      +++  M  +    N     ++A+ 
Sbjct: 749 QCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARE 808

Query: 526 LEAL 529
           L AL
Sbjct: 809 LSAL 812



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 131/582 (22%), Positives = 245/582 (42%), Gaps = 15/582 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI IL + G++  A+ I+  + +     +   +  LI  + +   +  +  +FD M + G
Sbjct: 208 MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG 267

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + +  +Y  L   +   GR   A     +M+ +GIEPT +TY + L     +     A+
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
                MK RG   ++ T+  +I+G +R  K + A  L+ +M    + PT ++Y  +I   
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R + A  IF  M S    P+  TY  ++   C  G + +   +  +M++    P +
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP-N 446

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK G+LN A  +L+ M    +  +A  Y  LI  F +    + A  L  
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            ++E  I   P         +Y  +I    +  +   A   F ++++ G L     +N +
Sbjct: 507 GMMEHGI--SPNHV------TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G SK  +   A      M ++G+  +   Y   I+   R G    A      M +  +
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 481 SPASSLFRSVMESLFEDGRVQTAS--RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            P    + S++  L ++GR + A    ++  +   G + N+D    +++ L   G   EA
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678

Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI---IDLASYEKVLDA 595
              +  M + G  P+ +   ++L  + K +     L+     D +   + L+ Y+ ++ A
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
           L        A  I   ++EK   +D  +   L+ GL +EG T
Sbjct: 739 LCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGET 780


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 154/607 (25%), Positives = 279/607 (45%), Gaps = 27/607 (4%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K+I  L R G+ + A  +L      G   D   +  L+  Y + G +  + ++   M   
Sbjct: 80  KLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP-- 137

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
            V     +Y  L +++  RGR   A    + ML  G +P   TY V+L     +   E A
Sbjct: 138 -VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQA 196

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +   ++M+++G + ++VTYN +ING  R  ++D+A  L   +     +P  +SYTT++KG
Sbjct: 197 MAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKG 256

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
             A +R DD   +F EM   +  PN VT+  L+   C  G +    +VL++M E      
Sbjct: 257 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECA-T 315

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           + ++   ++   CK G ++ A   L  M       +   Y  +++  C+AE ++ A +LL
Sbjct: 316 NTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELL 375

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
            ++V       P + +     ++N  I  LC  G   +A +   Q+ + G  +  V +N 
Sbjct: 376 KEMVRNNC---PPNEV-----TFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNA 427

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS-MIED 478
           L+ G   +G+ DSA E+ + M  +    +   Y  L+   L   E  DA   L + M+  
Sbjct: 428 LVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLLTG-LCNAERLDAAAELVAEMLHR 483

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
              P    F  ++    + G +  A  +++ M+E G   NL     + + +      E+A
Sbjct: 484 DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDA 543

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS--YEKVL 593
           L  +  ++  G  P+   F S++ +LS++ +   A+++  F L +D  +   +  Y K+L
Sbjct: 544 LELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQM--FHLAQDIGMRPKALVYNKIL 601

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI-RGEM 651
             L    +  NA   L  ++  G + +  +   LI GL +EG  K+A D+LS +  RG +
Sbjct: 602 LGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661

Query: 652 SRGSQKE 658
           S+   +E
Sbjct: 662 SKNLIEE 668



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 226/500 (45%), Gaps = 13/500 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I +L   G++  A  +L DM ++G Q +   + VL+E+  K    ++++ + 
Sbjct: 141 DAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVL 200

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M+  G   ++ +Y+ +   + R GR   A+   N++ S G +P   +Y  +L G   S
Sbjct: 201 DEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCAS 260

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + +     F +M  +    + VT++ +I  + R   ++ A ++  +M E          
Sbjct: 261 KRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLC 320

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I       R DDA +  + M S+   P+ ++YT +L GLC A +  + +++L+EMV 
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVR 380

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
              PP + + F   + + C+ G +  A  +++ M           Y  L+  FC     D
Sbjct: 381 NNCPPNEVT-FNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID 439

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ-TGKAEIFFRQLMKKGVLD 413
            A++L      + +  +P +       +Y  ++  LC+  +    AE+    L +    +
Sbjct: 440 SALELF-----RSMPCKPNTI------TYTTLLTGLCNAERLDAAAELVAEMLHRDCPPN 488

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V FN L+    ++G  D A E+V+ M   G   +   Y  L +   +     DA   L 
Sbjct: 489 VVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            ++  G SP    F S++  L ++ RV+ A ++     + G++    +  KIL  L  R 
Sbjct: 549 GLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRH 608

Query: 534 HVEEALGRIDLMMQSGSVPN 553
            ++ A+  +  M+ +G +PN
Sbjct: 609 EIDNAIDFLAYMVSNGCMPN 628



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/514 (21%), Positives = 212/514 (41%), Gaps = 50/514 (9%)

Query: 177 LETAIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           L  A R  E   SR G + DV     +I    R  +  +A ++    +       V +Y 
Sbjct: 55  LAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYN 114

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           T++ GY      D A R+   M    V P+A TYT L+  LCD G++ +   +L +M+ R
Sbjct: 115 TLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR 171

Query: 296 YIPPK------------DNSVFMKLLGV----------------------QCKSGHLNAA 321
              P              NS F + + V                       C+ G ++ A
Sbjct: 172 GCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 231

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            D+L  +       +   Y  L++  C ++ +D   +L  +++EK  +   + T DM   
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN-EVTFDM--- 287

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL-IRGHSKEGNPDSAFEIVKIM 440
               +I+  C  G   +A    +Q+ +          N+ I    K+G  D AF+ +  M
Sbjct: 288 ----LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNM 343

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
           G  G   D  +Y  +++   R     DAK  L  M+ +   P    F + +  L + G +
Sbjct: 344 GSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLI 403

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
           + A  +++ M E G    +     ++    ++GH++ AL     M    +   + +LL+ 
Sbjct: 404 EQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTG 463

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L    +  AA +L+   L RDC  ++ ++  +++     G    A  ++ ++ME G   +
Sbjct: 464 LCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPN 523

Query: 621 WKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
             + + L  G+ ++ +++ A     ++ G +S+G
Sbjct: 524 LITYNTLFDGITKDCSSEDA---LELLHGLVSKG 554



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 158/346 (45%), Gaps = 5/346 (1%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N+V N +      + A +F   +   G  N D  ++  +++ L R  + N A+ +L +M 
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMGSYGC-NPDTISYTTVLKGLCRAERWNDAKELLKEMV 379

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +     +E  F   I    +KG++++++ + + M++ G    V +Y+AL      +G   
Sbjct: 380 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID 439

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F  M     +P   TY  +L G   + +L+ A     +M  R    +VVT+N ++
Sbjct: 440 SALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLV 496

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           N + +   +DEA +L  +M E    P +I+Y T+  G      ++DAL +   + S  V 
Sbjct: 497 NFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVS 556

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ +T+++++  L    ++ E  ++     +  + PK   V+ K+L   CK   ++ A D
Sbjct: 557 PDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPK-ALVYNKILLGLCKRHEIDNAID 615

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
            L  M+          Y ILIE   +  +   A  LL  L  + ++
Sbjct: 616 FLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/662 (22%), Positives = 304/662 (45%), Gaps = 17/662 (2%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           AW  +L+ K+R L+      LV  VL    +   AL FF W +R   + HD   +  M++
Sbjct: 32  AWNHKLEGKMRHLLRGLKPRLVCAVLLSQSDERVALDFFFWSDRQWRYRHDPIVYCVMLD 91

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           +L +      AR +L  M ++G+Q     F  ++ SY + G ++ ++++  +M++ G+E 
Sbjct: 92  VLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEP 151

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           ++   +    +++       A R+  +M   GI P   TYN ++ G+    ++E A+   
Sbjct: 152 NLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELI 211

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M  +G S D V+Y T++    + +++ E   +  +M++  +    ++Y T+I      
Sbjct: 212 SEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKH 271

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
           + AD+AL+   E +    + + V Y+A++   C  G+M + ++++ EM  R   P D   
Sbjct: 272 QHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIP-DVVT 330

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  ++    ++G +  A  +L+ M +         Y   ++  C+      A +++    
Sbjct: 331 YTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMK--A 388

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
            +E    P       A +Y+ ++      G+   A    R+++ KG    PV  N L++ 
Sbjct: 389 SEEQWWTPN------AITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQS 442

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             + G  D A + ++     G   +A  +  +I  + ++ +   A + LD M      P 
Sbjct: 443 LCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPD 502

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
           +  + +++++L + GR++ A+ +   M++KG+         ++      G VE+ L  +D
Sbjct: 503 AVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLD 562

Query: 544 LMMQSGSVPN-FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
            M+        F+ ++  L   G   AA KLL   L     ID  +   ++++ L  G  
Sbjct: 563 KMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIP 622

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD--ILSRMIRGEMS----RGSQ 656
           L+AY +  ++  +  + D K  +K+   L QEG +++AD   L  + RG +S    R SQ
Sbjct: 623 LSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNISSHCLRHSQ 682

Query: 657 KE 658
            E
Sbjct: 683 TE 684


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/537 (25%), Positives = 242/537 (45%), Gaps = 54/537 (10%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           +E  +  LI    K G + ++ ++ D M+  G+   V  ++ + K + + GR+  A  YF
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYF 88

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL-DVVTYNTMINGYNR 208
             +      P   T+N+++     S ++E A + FE M +    L +VVTY T+ING  +
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             K+D A +L   M E    P VI+Y+ +++G     R D    +  EM     +P+ + 
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  LL GL                                    CKS  L+ A ++++ M
Sbjct: 209 YNTLLNGL------------------------------------CKSRRLDEALELVQLM 232

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           IR         Y  L+E FC+++  DRA +L+  + E+     P   ++     YN +I 
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGC---PPDVIN-----YNTVIA 284

Query: 389 HLCHNGQTGKAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPD------SAFEIVKIMG 441
            LC + +   A+   +Q++  + V D + ++ +I G  K+   D      +A EI+++M 
Sbjct: 285 GLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           + G P +A  Y  +IE   R  +   A   L  MI+    P  S F  V+ SL +   + 
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS--GSVPNFDSLLS 559
            A ++   M E+  K N    A +++ L   G V++A+   +LM++S    V  ++S+L 
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLD 464

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
            L   G+   AV++++  + ++C  D ASY  ++  L        AY +   +  KG
Sbjct: 465 GLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 208/464 (44%), Gaps = 17/464 (3%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N++ + L  +   E A Q F  +  +     +  T+  +I  L + GKL+ A  +L  M 
Sbjct: 104 NILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMN 163

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           + G   +   + VL+E   K G   +   +   M + G +  V  Y+ L   + +  R  
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLD 223

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A      M+  G  PT  TYN ++  F  S +++ A R  + M  RG   DV+ YNT+I
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD------DALRIFDEM 257
            G  R  ++D+A+ L  +M      P VI+Y+T+I G     R D       A  I + M
Sbjct: 284 AGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMM 343

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           K     PNA TY  ++ GLC A K  +   +LR M++  + P D S F  ++G  CKS  
Sbjct: 344 KQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP-DLSSFSMVIGSLCKSHD 402

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           L+AA  +   M           Y  LI+   K    D+A+++ + +VE     RP     
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES---FRPG---- 455

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
              ++YN ++  LC  G+  +A      ++ K    D  ++  LIRG  +    + A+E+
Sbjct: 456 --VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYEL 513

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
            + +  +G   +   Y  L+    +K   +DA    + +IE G+
Sbjct: 514 FQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 132/570 (23%), Positives = 254/570 (44%), Gaps = 59/570 (10%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N   N+L  A     A+Q FR  ER      +  T+  +I  L + GKL+ A  +L +M 
Sbjct: 2   NCALNLLVRAGQHGQAVQLFRE-ERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 84  KKGV-----------------------------------QWDEDMFEVLIESYGKKGIVQ 108
            +G+                                     D   F +L+++  K G V+
Sbjct: 58  DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 109 ESVKIFDIMKQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
           E+ +IF+ M        +V +Y  +   + + G+   A    + M   G  P   TY+V+
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           + G   + + +      ++M  RG   DV+ YNT++NG  + +++DEA +L   M     
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            PTV++Y ++++ +   ++ D A R+   M      P+ + Y  ++ GLC   ++ + Q 
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 288 VLREMV-ERYIPPKDNSVFMKLLGVQCKSGH------LNAAADVLKAMIRLSIPTEAGHY 340
           +L++MV  R +P  D   +  ++   CK         L AA ++L+ M +   P  AG Y
Sbjct: 298 LLKQMVAARCVP--DVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA- 399
            ++IE  C+A    +A+ LL ++++ E++         + SS++ +I  LC +     A 
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVV--------PDLSSFSMVIGSLCKSHDLDAAY 407

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
           +IF     ++   +PVA+  LI G SK G  D A  + ++M     P  A  Y  +++  
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVA-TYNSVLDGL 466

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
              G   +A   ++ MI     P  + + +++  L     V+ A  + +++  KG    +
Sbjct: 467 CGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEV 526

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSG 549
            +   ++  L  +  + +A G  + ++++G
Sbjct: 527 GVYNVLVNELCKKKRLSDAHGVANKLIEAG 556


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 224/454 (49%), Gaps = 23/454 (5%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M++ G   +  +Y+AL   +   GR   A+  + +M+  G  P   TYN +L GF    +
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           L+ A++ F+    RG   DVVTYN +ING+ +  K+DEA+++   M  +N+ P V++Y +
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVER 295
           ++ G     R D+A R+    K F   PN +TY+ L+ GLC   + V E  K+   ++++
Sbjct: 121 LVNGLCKNGRVDEA-RMLIVDKGF--SPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 296 -YIP--PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
            Y P  P  N +   LL    K   +N A ++   +++  +  +A  Y + I+  CKA  
Sbjct: 178 GYEPEVPTYNILIDGLL----KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            + A+ +L  + EK  +         +  S+N +I  LC   +  +AE+    +  KG  
Sbjct: 234 VEDALLMLKDMDEKGCV--------PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 285

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR---KGEPADA 468
            + ++FN LI G  + G    A    K M +RGV      Y  L++   +   +G   +A
Sbjct: 286 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
            T  D+MIE G  P    + ++++ L + G++  A R++ +M  KG   N+     ++  
Sbjct: 346 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 405

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
           L     V+EAL     M++ G VP+  +  +++S
Sbjct: 406 LCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 221/456 (48%), Gaps = 28/456 (6%)

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M   G  P R TYN +L G     ++  A   +E M   G S DVVTYNT+++G+ +  +
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           +DEA K+F    ++   P V++Y  +I G+   ++ D+A RI   M S ++ P+ VTY +
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK-----SGHLNAAADVLK 326
           L+ GLC  G++ E + ++   V++   P +   +  L+   C+     S  L     VLK
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSP-NVITYSTLISGLCRELRGVSEALKLFGSVLK 176

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
                 +PT    Y ILI+   K +  + A +L   LV        +  L+ +A +Y   
Sbjct: 177 QGYEPEVPT----YNILIDGLLKEDRVNEAFELFSGLV--------KHGLEPDAITYTVF 224

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC  G+   A +  + + +KG V D V+ N +I G  KE   D A  ++  M  +G 
Sbjct: 225 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 284

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF---EDGRVQT 502
             +A ++  LI    R G+   A T    M++ G  P    +  +++ L    ++GR++ 
Sbjct: 285 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 344

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A  +  +M+EKG   ++   + +++ L   G +++A   +  M   G +PN   ++SL+S
Sbjct: 345 AITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 404

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
            L    K   A++L    + + C+ D  +Y  ++ A
Sbjct: 405 GLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 217/450 (48%), Gaps = 23/450 (5%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  +R T+  ++  L   G+++ A+ +   M K G   D   +  L+  + K G + E++
Sbjct: 6   FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEAL 65

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           KIFD   + G    V +Y+AL     +  +   A+R   +M+SE + P   TYN ++ G 
Sbjct: 66  KIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGL 125

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR-FKKMDEAEKLFAEMKEKNIEPT 230
             + +++ A     D   +G S +V+TY+T+I+G  R  + + EA KLF  + ++  EP 
Sbjct: 126 CKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPE 182

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V +Y  +I G +  +R ++A  +F  +    ++P+A+TYT  + GLC AG++ +   +L+
Sbjct: 183 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 242

Query: 291 EMVERYIPP---KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +M E+   P     N+V   L    CK   ++ A  +L  M        A  +  LI   
Sbjct: 243 DMDEKGCVPDVVSHNAVINGL----CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQ 298

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK---AEIFFR 404
           C+A  + +A+    +++++ +  +P         +YN ++  LC   Q G+   A   F 
Sbjct: 299 CRAGKWKKAMTTFKEMLKRGV--KPTVV------TYNILVDGLCKARQEGRIKEAITLFD 350

Query: 405 QLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            +++KG V D V ++ LI G  K G  D A  ++  M  +G   +   Y  LI       
Sbjct: 351 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLE 410

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMES 493
           +  +A     +M+E G  P +  + +++ +
Sbjct: 411 KVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 209/451 (46%), Gaps = 20/451 (4%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M+  G   + +TYN +++G     +M +A+ L+  M +    P V++Y T++ G+  V  
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            D+AL+IFD        P+ VTY AL+ G C A K+ E Q++L+ MV   + P D   + 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVP-DVVTYN 119

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA-EMYDRAIKLLDKLVE 365
            L+   CK+G ++ A  ++   +          Y  LI   C+       A+KL   +++
Sbjct: 120 SLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
           +          + E  +YN +I  L    +  +A   F  L+K G+  D + +   I G 
Sbjct: 177 Q--------GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGL 228

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K G  + A  ++K M  +G   D  ++  +I    ++    +A+  L  M   G SP +
Sbjct: 229 CKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNA 288

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL---MRGHVEEALGR 541
             F +++      G+ + A    K M+++GVK  +     +++ L      G ++EA+  
Sbjct: 289 ISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL 348

Query: 542 IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
            D M++ G VP+   + +L+  L + GK   A +LL     + CI ++ +Y  ++  L  
Sbjct: 349 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 408

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
             K   A  +   ++EKG V D  +   +I+
Sbjct: 409 LEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 199/452 (44%), Gaps = 17/452 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K G   +   +  L+      G + ++  +++ M + G    V +Y+ L     + G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A + F+  +  G  P   TYN ++ GF  + KL+ A R  + M S  +  DVVTYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA-DDALRIFDEMKSF 260
           ++NG  +  ++DEA  L     +K   P VI+Y+T+I G     R   +AL++F  +   
Sbjct: 121 LVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             +P   TY  L+ GL    ++ E  ++   +V+  + P D   +   +   CK+G +  
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEP-DAITYTVFIDGLCKAGRVED 236

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +LK M       +   +  +I   CK +  D A  LL  +  K             A
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK--------GCSPNA 288

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSK---EGNPDSAFEI 436
            S+N +I   C  G+  KA   F++++K+GV    V +N L+ G  K   EG    A  +
Sbjct: 289 ISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL 348

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M  +G   D   Y  LI+   + G+  DA+  L +M   G  P    + S++  L  
Sbjct: 349 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 408

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
             +V  A  +  +MVEKG   +      I+ A
Sbjct: 409 LEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 205/448 (45%), Gaps = 24/448 (5%)

Query: 21  FDHNLVYNVL-----HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
           + + + YN L     +G + S+    + R + +AG ++ D  T+  ++    +VG+L+ A
Sbjct: 7   WPNRITYNALLSGLCNGGRMSDAQALYERMI-KAG-YSPDVVTYNTLLHGFCKVGELDEA 64

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             I     K+G   D   +  LI  + K   + E+ +I   M    +   V +Y++L   
Sbjct: 65  LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNG 124

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK-LETAIRFFEDMKSRGISL 194
           + + GR   A+     ++ +G  P   TY+ ++ G    L+ +  A++ F  +  +G   
Sbjct: 125 LCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEP 181

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           +V TYN +I+G  +  +++EA +LF+ + +  +EP  I+YT  I G     R +DAL + 
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            +M      P+ V++ A++ GLC   ++ E + +L  M  +   P   S F  L+  QC+
Sbjct: 242 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAIS-FNTLICGQCR 300

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR---AIKLLDKLVEKEIILR 371
           +G    A    K M++  +      Y IL++  CKA    R   AI L D ++EK  +  
Sbjct: 301 AGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV-- 358

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNP 430
                  +  +Y+ +I  L   G+   A      +  KG +  V  +N+LI G       
Sbjct: 359 ------PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKV 412

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIES 458
           D A E+   M  +G   D   Y  +I +
Sbjct: 413 DEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 178/415 (42%), Gaps = 49/415 (11%)

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M+     PN +TY ALL GLC+ G+M + Q +   M++    P D   +  LL   CK G
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSP-DVVTYNTLLHGFCKVG 59

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L+ A  +    ++     +   Y  LI  FCKA+  D A ++L ++V + ++       
Sbjct: 60  ELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLV------- 112

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIF---------------------------------F 403
             +  +YN ++  LC NG+  +A +                                  F
Sbjct: 113 -PDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLF 171

Query: 404 RQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
             ++K+G    V  +N LI G  KE   + AFE+   + + G+  DA  Y   I+   + 
Sbjct: 172 GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 231

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G   DA   L  M E G  P      +V+  L ++ RV  A  ++  M  KG   N    
Sbjct: 232 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 291

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS---EKGKTIAAVKLLDF 576
             ++      G  ++A+     M++ G  P    ++ L+  L    ++G+   A+ L D 
Sbjct: 292 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 351

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            + +  + D+ +Y  ++D L  AGK  +A  +L  +  KG + +  + + LI+GL
Sbjct: 352 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL 406



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 10/268 (3%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN ++  LC+ G+   A+  + +++K G   D V +N L+ G  K G  D A +I    
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            +RG   D   Y  LI  + +  +  +A+  L  M+ +   P    + S++  L ++GRV
Sbjct: 72  VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALL--MRGHVEEALGRIDLMMQSG---SVPNFD 555
             A  ++   V+KG   N+   + ++  L   +RG V EAL     +++ G    VP ++
Sbjct: 132 DEARMLI---VDKGFSPNVITYSTLISGLCRELRG-VSEALKLFGSVLKQGYEPEVPTYN 187

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            L+  L ++ +   A +L    +      D  +Y   +D L  AG+  +A  +L  + EK
Sbjct: 188 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 247

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           G V D  S + +I GL +E    +A++L
Sbjct: 248 GCVPDVVSHNAVINGLCKEKRVDEAEVL 275


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 233/492 (47%), Gaps = 18/492 (3%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT +TYN+++  +  + + +  +  F  +   G+  DV +YN +I+G+++  ++D+A  L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F +M+E+ I P V++Y+++I G    +  D A R+  +M    V+PN +TY  L+ G   
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 279 AGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           +G   E  +V +EM    + P   + + FM  L   CK G +  A D+  +M+      +
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTAL---CKHGRIKEARDIFDSMVLKGPKPD 363

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              YG L+  +  A        L + +V + ++         +   +N +I      G  
Sbjct: 364 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVV--------PDRHVFNTLINAYARLGMM 415

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            K+ + F  + K+GV  D + F+ +I    + G  D A E    M   GVP D   Y CL
Sbjct: 416 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCL 475

Query: 456 IESYLRKGEPADAKTALDSMIEDG-HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           I+    + +   AK  +  M+  G   P    F S++ +L ++GRV     V+  ++  G
Sbjct: 476 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 535

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
            + NL     +++   + G+++EA+G +D M   G  P+   +++L+    + G+   A+
Sbjct: 536 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 595

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            L    L +   +   SY  +L  L  A +T+ A  +  +++E G      +   ++ GL
Sbjct: 596 TLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 655

Query: 632 NQEGNTKQADIL 643
            +   T +A++L
Sbjct: 656 CRNNCTDEANML 667



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 122/554 (22%), Positives = 245/554 (44%), Gaps = 13/554 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N + +        + A   F  +E  G+   +  T+  +I  L +  +++ A  +L 
Sbjct: 225 FSYNALIDGFSKEGEVDKAHDLFYKMEEQGIM-PNVVTYSSLINGLCKTKEMDKAERVLR 283

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   GV+ +   +  LI  Y   G+ +ESV++F  M    +   V + ++    + + G
Sbjct: 284 QMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHG 343

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A+  F+ M+ +G +P   +Y  +L G+  +  +      F  M   G+  D   +N
Sbjct: 344 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 403

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+IN Y R   MD++  +F +M ++ + P +I+++T+I  +  + R DDA+  F+ M   
Sbjct: 404 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 463

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+   Y+ L+ G C+   +V+ ++++ +M+ + IPP     F  ++   CK G +  
Sbjct: 464 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAE 523

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
             DV+  +I          +  L++ +C       A+ LLD +  + + + P      + 
Sbjct: 524 GKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSM--ESVGVEP------DI 575

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +YN ++   C +G+   A   FR ++ K V L  V++N ++ G  +      A E+   
Sbjct: 576 YTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHE 635

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G+      Y  ++    R     +A   L+ +           F  V+ ++F+ GR
Sbjct: 636 MIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGR 695

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
            Q A  +  ++   G+   +     ++  L+     E+A      M +S   P+    + 
Sbjct: 696 RQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNE 755

Query: 557 LLSVLSEKGKTIAA 570
           ++ +L  KG+   A
Sbjct: 756 IIRMLLNKGEVAKA 769



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/575 (21%), Positives = 249/575 (43%), Gaps = 31/575 (5%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           + G+  D   +  LI+ + K+G V ++  +F  M++ G+  +V +Y +L   + +     
Sbjct: 217 RTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMD 276

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A+R   +M+  G+ P   TYN ++ G+  S   + ++R F++M S  +  DV   N+ +
Sbjct: 277 KAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFM 336

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
               +  ++ EA  +F  M  K  +P VISY  ++ GY           +F+ M    V 
Sbjct: 337 TALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVV 396

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+   +  L+      G M +   +  +M ++ + P D   F  ++   C+ G L+ A +
Sbjct: 397 PDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNP-DIITFSTVISAFCRLGRLDDAME 455

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
               MI   +P +   Y  LI+  C      +A +L+  ++ K I   P   +      +
Sbjct: 456 KFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGI---PPPCIKF----F 508

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             +I +LC  G+  + +     ++  G   + + FN+L+ G+   GN   A  ++  M  
Sbjct: 509 TSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES 568

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            GV  D   Y  L++ Y + G   DA T    M+    +  S  +  ++  LF+  R   
Sbjct: 569 VGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIV 628

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLS 559
           A  +   M+E G+  ++   A +L  L      +EA   L ++  M     +  F+ ++ 
Sbjct: 629 AKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIR 688

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            + + G+   A +L            +++Y  V         T+  Y ++   + K    
Sbjct: 689 AMFKVGRRQEAKELF---------AAISTYGLV--------PTILTYRVMITNLIKE--E 729

Query: 620 DWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
            ++ +D L + + +   T  + IL+ +IR  +++G
Sbjct: 730 SFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKG 764



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 120/248 (48%), Gaps = 2/248 (0%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VG +  A  +L  M   GV+ D   +  L++ Y K G + +++ +F  M    V  +  S
Sbjct: 553 VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS 612

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y+ +   + +  R ++AK  F++M+  G+  + HTY  +L G   +   + A    E + 
Sbjct: 613 YNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLF 672

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           S  +  D++T+N +I    +  +  EA++LFA +    + PT+++Y  MI   +  E  +
Sbjct: 673 SMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFE 732

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFM 306
           DA  +F  M+     P++     ++  L + G++ +    L ++ ++ I P+    S+ +
Sbjct: 733 DADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792

Query: 307 KLLGVQCK 314
            L  V  K
Sbjct: 793 YLFSVNGK 800


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/590 (24%), Positives = 273/590 (46%), Gaps = 46/590 (7%)

Query: 25  LVYN-VLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN V+HG      +  A   F  + R G+   D  T+  +I+ L +   ++ A  +L 
Sbjct: 266 VAYNTVIHGFFKEGETGKACSLFHEMTRQGV-KPDVVTYNLIIDALCKARAMDKAELVLR 324

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G Q D   +  +I  Y   G ++E+ K+F  MK  G+  ++   ++    + + G
Sbjct: 325 QMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHG 384

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A   F+ M ++G +P   +Y  +L G+         I  F  MKS GI+ D   +N
Sbjct: 385 RSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFN 444

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+ Y +   +D+A  +F EM+++ + P V++Y+T+I  +  + R  DA+  F++M + 
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            ++PN   Y +++ G C  G +V+ ++++ EM+ + IP  D   F  ++   CK G +  
Sbjct: 505 GIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMD 564

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL----VEKEIILRPQSTL 376
           A D+   +  +    +   +  LI+ +C     D+A K+LD +    VE +I+    STL
Sbjct: 565 AHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIV--TYSTL 622

Query: 377 ------------------DME-------ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
                             +M+         +Y  M+  L   G+T  A   F ++++ G 
Sbjct: 623 LDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGT 682

Query: 412 LDPVAFNNLIRGHSKEGN-PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
              V+   +I G     N  D A  + + +G   V         +I +  +     +AK 
Sbjct: 683 TVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKE 742

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
              ++   G  P  S +  ++ +L +DG V+ A+ +  SM + G+     L+ +I+  LL
Sbjct: 743 LFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLL 802

Query: 531 MRGHVEEA---LGRID---LMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
            +G + +A   L ++D   +++++ +      +LS+ S KGK    +KLL
Sbjct: 803 EKGEIAKAGNYLSKVDGKRILLEASTT---SLMLSLFSRKGKYHEDMKLL 849



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 221/504 (43%), Gaps = 21/504 (4%)

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKL 135
           CIL    + G++  +     L++        +E+V +    M +LG   +V SY  + K 
Sbjct: 182 CIL----RTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKG 237

Query: 136 ILRRGRYMMAKRYFNKMLSEG--IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           +        A   F  M  EG    P    YN ++ GFF   +   A   F +M  +G+ 
Sbjct: 238 LCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVK 297

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DVVTYN +I+   + + MD+AE +  +M     +P  ++Y  MI GY  + R  +A ++
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKM 357

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F +MKS  + PN V   + L  LC  G+  E  ++   M  +   P D   +  LL    
Sbjct: 358 FRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKP-DIVSYCTLLHGYA 416

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
             G       +  +M    I  +   + ILI  + K  M D A+ +  ++         Q
Sbjct: 417 SEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM--------QQ 468

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDS 432
             +  +  +Y+ +I      G+   A   F Q++ +G+    A ++++I+G    G    
Sbjct: 469 QGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVK 528

Query: 433 AFEIVKIMGRRGVPR-DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           A E+V  M  +G+PR D   +  +I S  + G   DA    D + + G  P    F S++
Sbjct: 529 AKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLI 588

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           +     G++  A +++ +M   GV+ ++   + +L+     G + + L     M + G  
Sbjct: 589 DGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVK 648

Query: 552 PN---FDSLLSVLSEKGKTIAAVK 572
           PN   +  +L+ L   G+T+AA K
Sbjct: 649 PNTVTYGIMLAGLFRAGRTVAARK 672



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 213/500 (42%), Gaps = 53/500 (10%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG--ISLDVVTYNTMINGY 206
            ++M   G  P   +Y+++L G   +   + A+  F+ M   G   S +VV YNT+I+G+
Sbjct: 216 LHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGF 275

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +  +  +A  LF EM  + ++P V++Y  +I         D A  +  +M +   +P+ 
Sbjct: 276 FKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDT 335

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VTY  ++ G    G++ E  K+ R+M  R + P +  +    L   CK G    AA++  
Sbjct: 336 VTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIP-NIVICNSFLASLCKHGRSKEAAEIFD 394

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
           +M      T  GH                         + +I+            SY  +
Sbjct: 395 SM------TAKGH-------------------------KPDIV------------SYCTL 411

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           +      G        F  +   G+  D   FN LI  ++K G  D A  I   M ++GV
Sbjct: 412 LHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGV 471

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  +I ++ R G   DA    + M+  G  P ++++ S+++     G +  A  
Sbjct: 472 SPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKE 531

Query: 506 VMKSMVEKGV-KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
           ++  M+ KG+ + ++     ++ +L   G V +A    DL+   G  P+   F SL+   
Sbjct: 532 LVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGY 591

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TD 620
              GK   A K+LD         D+ +Y  +LD     G+ +N    LF+ M++ GV  +
Sbjct: 592 CLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR-INDGLTLFREMQRKGVKPN 650

Query: 621 WKSSDKLIAGLNQEGNTKQA 640
             +   ++AGL + G T  A
Sbjct: 651 TVTYGIMLAGLFRAGRTVAA 670



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/465 (21%), Positives = 198/465 (42%), Gaps = 19/465 (4%)

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           E    R + L V TY+ +++   R ++ D    LF  +    ++   I+ +T++K     
Sbjct: 146 EQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYA 205

Query: 245 ERADDALRIF-DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
            R ++A+ +    M      PN  +Y+ +L GLCD         + + M +       N 
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNV 265

Query: 304 V-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           V +  ++    K G    A  +   M R  +  +   Y ++I+  CKA   D+A      
Sbjct: 266 VAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKA------ 319

Query: 363 LVEKEIILRPQST--LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
               E++LR  +T     +  +YN MI      G+  +A   FR++  +G++ + V  N+
Sbjct: 320 ----ELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNS 375

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            +    K G    A EI   M  +G   D  +Y  L+  Y  +G  AD     +SM  +G
Sbjct: 376 FLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNG 435

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            +    +F  ++ +  + G V  A  +   M ++GV  ++   + ++ A    G + +A+
Sbjct: 436 IAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAM 495

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI-IDLASYEKVLDA 595
            + + M+  G  PN   + S++      G  + A +L+   + +     D+  +  V+++
Sbjct: 496 EKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINS 555

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           L   G+ ++A+ I   + + G   D  +   LI G    G   +A
Sbjct: 556 LCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKA 600



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 88/220 (40%), Gaps = 9/220 (4%)

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
           G R VP     Y  L++   R   P         ++  G         ++++ L    R 
Sbjct: 149 GPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRT 208

Query: 501 QTASRVM-KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV--PN---F 554
           + A  V+   M E G   N+   + IL+ L      + AL    +M + G    PN   +
Sbjct: 209 EEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAY 268

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
           ++++    ++G+T  A  L      +    D+ +Y  ++DAL  A     A  +L ++  
Sbjct: 269 NTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT 328

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
            G   D  + + +I G    G  K+A   ++M R   SRG
Sbjct: 329 NGAQPDTVTYNCMIHGYATLGRLKEA---AKMFRKMKSRG 365


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 183/787 (23%), Positives = 330/787 (41%), Gaps = 157/787 (19%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILG 67
           R  N I  L   F  ++V  VL   + N   +L FF++V +   F  + +++ K++ IL 
Sbjct: 54  RRCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILS 113

Query: 68  RVGKLNHARCIL---LDMPK----KGVQWDE------------DMFEVLIESYGKKGIVQ 108
           R    +  R  L   +D+ K      V WDE             +F+++++ Y +KG+ +
Sbjct: 114 RGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTK 173

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
            ++ +FD M + G   S++S ++L   +++ G    A   + +M+  GI P     ++M+
Sbjct: 174 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 233

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
             F    K++ A  F + M++ G+  ++VTY+++INGY     ++ A+ +   M EK + 
Sbjct: 234 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS 293

Query: 229 PTVISYTTMIKGY----------------------VAVERA--------------DDALR 252
             V++YT +IKGY                      V  ERA              DDA+R
Sbjct: 294 RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVR 353

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           + DEM    +K N     +L+ G C  G++ E + V+  MV+  + P D+  +  LL   
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP-DSYSYNTLLDGY 412

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK-------------- 358
           C+ GH + A ++   M++  I      Y  L++  C+   +D A++              
Sbjct: 413 CREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDE 472

Query: 359 -----LLDKLVEKEIILRPQSTL--DMEAS-------SYNPMIQHLCHNGQTGKAEIFFR 404
                LLD L + E      STL  D+ A        ++N MI  LC  G+  +AE  F 
Sbjct: 473 VGYSTLLDGLFKMEN-FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531

Query: 405 QLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI--------------------------- 436
           ++   G   D + +  LI G+ K  N   AF++                           
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSR 591

Query: 437 --------VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
                   +  MG RG+  +   Y  LI+ + ++G    A ++   M E+G S    +  
Sbjct: 592 RLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 651

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKG--------------------VKENLDLVAKI--- 525
           +++  L+  GR+  A+ +M+ MV+ G                    + ++LD   K    
Sbjct: 652 TMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLL 711

Query: 526 ---------LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
                    +  L   G V++A     ++   G VP+   + +L+   S  G    A +L
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
            D  L R  + ++ +Y  +++ L  +     A  +  K+ +KG   +  + + LI G  +
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831

Query: 634 EGNTKQA 640
            GN   A
Sbjct: 832 IGNMDAA 838



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 238/511 (46%), Gaps = 38/511 (7%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+++ A  ++  M    ++ D   +  L++ Y ++G   E+  + D M Q G+E +V +Y
Sbjct: 381 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L K + R G +  A + ++ M+  G+ P    Y+ +L G F     E A   ++D+ +
Sbjct: 441 NTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           RG +   +T+NTMI+G  +  KM EAE++F +MK+    P  I+Y T+I GY        
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 560

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A ++   M+   + P+   Y +L+ GL  + ++VE   +L EM  R + P +   +  L+
Sbjct: 561 AFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTP-NIVTYGALI 619

Query: 310 GVQCKSGHLNAA-------------------ADVLKAMIRLSIPTEAG-------HYGIL 343
              CK G L+ A                   + ++  + RL    EA         +G  
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679

Query: 344 IENFC--KAEMYDRAI-KLLDKLVEK-EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
            ++ C  K+++   AI K+ D L E  +  L P + +      YN  I  LC  G+   A
Sbjct: 680 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV------YNIAIAGLCKTGKVDDA 733

Query: 400 EIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
             FF  L  KG V D   +  LI G+S  GN D AF +   M RRG+  +   Y  LI  
Sbjct: 734 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING 793

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             +      A+     + + G  P    + ++++   + G +  A ++   M+E+G+  +
Sbjct: 794 LCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 853

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           +   + ++  L   G +E ++  ++ M+++G
Sbjct: 854 VVTYSALINGLCKHGDIERSMKLLNQMIKAG 884



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 125/233 (53%), Gaps = 3/233 (1%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+  L R+G+++ A  ++  M   G   D + F   ++S  +   +Q+     D   +  
Sbjct: 653 MVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTF 709

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +   Y+     + + G+   A+R+F+ +  +G  P   TY  ++ G+  +  ++ A 
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R  ++M  RG+  ++VTYN +ING  + + +D A++LF ++ +K + P V++Y T+I GY
Sbjct: 770 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 829

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +   D A ++ D+M    + P+ VTY+AL+ GLC  G +    K+L +M++
Sbjct: 830 CKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIK 882



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 33/313 (10%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L +M  +G+  +   +  LI+ + K+G++ ++   +  M + G+  ++     +   + 
Sbjct: 599 LLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY 658

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHT--------------------------------YN 165
           R GR   A     KM+  G  P                                    YN
Sbjct: 659 RLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYN 718

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
           + + G   + K++ A RFF  +  +G   D  TY T+I+GY+    +DEA +L  EM  +
Sbjct: 719 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            + P +++Y  +I G    E  D A R+F ++    + PN VTY  L+ G C  G M   
Sbjct: 779 GLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAA 838

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            K+  +M+E  I P     +  L+   CK G +  +  +L  MI+  + ++   Y  L++
Sbjct: 839 FKLKDKMIEEGISPS-VVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897

Query: 346 NFCKAEMYDRAIK 358
              K   Y+   K
Sbjct: 898 GGFKTSNYNEMSK 910



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 2/210 (0%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++ + I    K G V ++ + F ++   G      +Y  L       G    A R  ++M
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L  G+ P   TYN ++ G   S  ++ A R F  +  +G+  +VVTYNT+I+GY +   M
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D A KL  +M E+ I P+V++Y+ +I G       + ++++ ++M    V    + Y  L
Sbjct: 836 DAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTL 895

Query: 273 LPGLCDAGKMVEVQK--VLREMVERYIPPK 300
           + G        E+ K   L++ +  ++ PK
Sbjct: 896 VQGGFKTSNYNEMSKPEALKQNMNCFLLPK 925



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 91/175 (52%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L + GK++ AR     +  KG   D   +  LI  Y   G V E+ ++ D M + G+  +
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           + +Y+AL   + +      A+R F+K+  +G+ P   TYN ++ G+     ++ A +  +
Sbjct: 784 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            M   GIS  VVTY+ +ING  +   ++ + KL  +M +  ++  +I Y T+++G
Sbjct: 844 KMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 7/236 (2%)

Query: 23  HNLVYNV----LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           +N+VYN+    L      + A +FF  +   G F  D  T+  +I      G ++ A  +
Sbjct: 713 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG-FVPDNFTYCTLIHGYSAAGNVDEAFRL 771

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
             +M ++G+  +   +  LI    K   V  + ++F  + Q G+  +V +Y+ L     +
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G    A +  +KM+ EGI P+  TY+ ++ G      +E +++    M   G+   ++ 
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           Y T++ G  +    +E  K   E  ++N+   ++        +V V   D  +RIF
Sbjct: 892 YCTLVQGGFKTSNYNEMSK--PEALKQNMNCFLLPKFKHSWKFVGVVALDCPIRIF 945


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 233/492 (47%), Gaps = 18/492 (3%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT +TYN+++  +  + + +  +  F  +   G+  DV +YN +I+G+++  ++D+A  L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F +M+E+ I P V++Y+++I G    +  D A R+  +M    V+PN +TY  L+ G   
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 279 AGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           +G   E  +V +EM    + P   + + FM  L   CK G +  A D+  +M+      +
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTAL---CKHGRIKEARDIFDSMVLKGPKPD 292

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              YG L+  +  A        L + +V + ++         +   +N +I      G  
Sbjct: 293 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVV--------PDRHVFNTLINAYARLGMM 344

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            K+ + F  + K+GV  D + F+ +I    + G  D A E    M   GVP D   Y CL
Sbjct: 345 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCL 404

Query: 456 IESYLRKGEPADAKTALDSMIEDG-HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           I+    + +   AK  +  M+  G   P    F S++ +L ++GRV     V+  ++  G
Sbjct: 405 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 464

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
            + NL     +++   + G+++EA+G +D M   G  P+   +++L+    + G+   A+
Sbjct: 465 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 524

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            L    L +   +   SY  +L  L  A +T+ A  +  +++E G      +   ++ GL
Sbjct: 525 TLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 584

Query: 632 NQEGNTKQADIL 643
            +   T +A++L
Sbjct: 585 CRNNCTDEANML 596



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 122/554 (22%), Positives = 245/554 (44%), Gaps = 13/554 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N + +        + A   F  +E  G+   +  T+  +I  L +  +++ A  +L 
Sbjct: 154 FSYNALIDGFSKEGEVDKAHDLFYKMEEQGIM-PNVVTYSSLINGLCKTKEMDKAERVLR 212

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   GV+ +   +  LI  Y   G+ +ESV++F  M    +   V + ++    + + G
Sbjct: 213 QMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHG 272

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A+  F+ M+ +G +P   +Y  +L G+  +  +      F  M   G+  D   +N
Sbjct: 273 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 332

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+IN Y R   MD++  +F +M ++ + P +I+++T+I  +  + R DDA+  F+ M   
Sbjct: 333 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 392

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+   Y+ L+ G C+   +V+ ++++ +M+ + IPP     F  ++   CK G +  
Sbjct: 393 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAE 452

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
             DV+  +I          +  L++ +C       A+ LLD +  + + + P      + 
Sbjct: 453 GKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSM--ESVGVEP------DI 504

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +YN ++   C +G+   A   FR ++ K V L  V++N ++ G  +      A E+   
Sbjct: 505 YTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHE 564

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G+      Y  ++    R     +A   L+ +           F  V+ ++F+ GR
Sbjct: 565 MIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGR 624

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
            Q A  +  ++   G+   +     ++  L+     E+A      M +S   P+    + 
Sbjct: 625 RQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNE 684

Query: 557 LLSVLSEKGKTIAA 570
           ++ +L  KG+   A
Sbjct: 685 IIRMLLNKGEVAKA 698



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/575 (21%), Positives = 249/575 (43%), Gaps = 31/575 (5%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           + G+  D   +  LI+ + K+G V ++  +F  M++ G+  +V +Y +L   + +     
Sbjct: 146 RTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMD 205

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A+R   +M+  G+ P   TYN ++ G+  S   + ++R F++M S  +  DV   N+ +
Sbjct: 206 KAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFM 265

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
               +  ++ EA  +F  M  K  +P VISY  ++ GY           +F+ M    V 
Sbjct: 266 TALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVV 325

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+   +  L+      G M +   +  +M ++ + P D   F  ++   C+ G L+ A +
Sbjct: 326 PDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNP-DIITFSTVISAFCRLGRLDDAME 384

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
               MI   +P +   Y  LI+  C      +A +L+  ++ K I   P   +      +
Sbjct: 385 KFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGI---PPPCIKF----F 437

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             +I +LC  G+  + +     ++  G   + + FN+L+ G+   GN   A  ++  M  
Sbjct: 438 TSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES 497

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            GV  D   Y  L++ Y + G   DA T    M+    +  S  +  ++  LF+  R   
Sbjct: 498 VGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIV 557

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLS 559
           A  +   M+E G+  ++   A +L  L      +EA   L ++  M     +  F+ ++ 
Sbjct: 558 AKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIR 617

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            + + G+   A +L            +++Y  V         T+  Y ++   + K    
Sbjct: 618 AMFKVGRRQEAKELF---------AAISTYGLV--------PTILTYRVMITNLIKE--E 658

Query: 620 DWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
            ++ +D L + + +   T  + IL+ +IR  +++G
Sbjct: 659 SFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKG 693



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 120/248 (48%), Gaps = 2/248 (0%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VG +  A  +L  M   GV+ D   +  L++ Y K G + +++ +F  M    V  +  S
Sbjct: 482 VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS 541

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y+ +   + +  R ++AK  F++M+  G+  + HTY  +L G   +   + A    E + 
Sbjct: 542 YNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLF 601

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           S  +  D++T+N +I    +  +  EA++LFA +    + PT+++Y  MI   +  E  +
Sbjct: 602 SMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFE 661

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFM 306
           DA  +F  M+     P++     ++  L + G++ +    L ++ ++ I P+    S+ +
Sbjct: 662 DADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721

Query: 307 KLLGVQCK 314
            L  V  K
Sbjct: 722 YLFSVNGK 729


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 153/653 (23%), Positives = 272/653 (41%), Gaps = 69/653 (10%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR---VGKLN 73
           L P+   + V N+L   KN++  L+FF W+ R   F HD    + M+  L R       +
Sbjct: 72  LSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPAD 131

Query: 74  HARCILLDMP------KKGVQWDEDM------------FEVLIESYGKKGIVQESVKIFD 115
           H R +++         K+  Q+  ++            F  L+   GK  +V  +  ++ 
Sbjct: 132 HVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYI 191

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
            M   G+  S+ +++ +  ++ ++GR   AK   + +      P   TY  ++ G   + 
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
            L+ A   F+ M   G   + VTY+T+ING     +++EA  +  EM +K IEPTV +YT
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYT 311

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
             +        + +A+ +  +MK     PN  T+TAL+ GL   GK      +  +M+  
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            + P     +  L+   C  G    A  + K M+          Y  +I+ FC      +
Sbjct: 372 GLVPT-TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQK 430

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           A+ + DK+++               SS N                              +
Sbjct: 431 AMVIFDKMLKA-------------GSSPN-----------------------------VI 448

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N LI G+ K+GN ++A  +++IM   G+  DA  Y  LI  + R G+   A +    M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +E G SP    + ++++  F   +V  A  +   MVE G   +      ++        +
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
            EA      M++ G +PN   + S +  L   G+T  A K+      R+   +L +Y  +
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628

Query: 593 LDALLAAGKTLNA--YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           +  L   G+  +A  Y++L ++   G   +  +   L+ GL  EG   +AD L
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQL 681



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 254/538 (47%), Gaps = 15/538 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L   G+L  A  +L +M +KG++     + + + S    G   E+V++   M
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+ G   +++++ AL   + R G++ +A   ++KML++G+ PT  TYN ++    +  + 
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           ETA   F+ M S G      TYN +I  +     + +A  +F +M +    P VI+Y T+
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY      ++A+R+ + MK   +KP+A TYT L+ G    GK+     +   M+E  I
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P ++  +  ++        ++ A  +   M+       +  Y ++I  F K      A 
Sbjct: 514 SP-NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-A 416
               K+V++ ++  P         +Y   I  LC NG+TG A   F ++ K+     +  
Sbjct: 573 NFCGKMVKQGLL--PN------VITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 417 FNNLIRGHSKEGNPDSA--FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           +++LI G  +EG  + A  + ++  +   G   + D Y  L++    +G   +A   + S
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M + G  P+  ++R+++    ++ +V++A  +  SM   G + +L     ++ AL     
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           +EEA      M++     +   +  LL  L ++G+T   +KLL     R+C ++  +Y
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 204/484 (42%), Gaps = 25/484 (5%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           +T   +I  L R GK   A  +   M   G+      +  LI     +G  + +  IF  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M   G   S ++Y+ + K     G    A   F+KML  G  P   TYN +++G+     
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           L  A+R  E MK  G+  D  TY  +I+G++R  K++ A  LF  M E  I P  ++YT 
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I GY  + + DDAL +F +M      P++ TY  ++ G      + E +    +MV++ 
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK------A 350
           + P +   +   +   C++G    A  +   M + +       Y  LI   C+      A
Sbjct: 583 LLP-NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
           EMY+   +L     E  +             +Y  +++ LC  G+  +A+     + KKG
Sbjct: 642 EMYNLLARLTHYGCEPNV------------DTYTTLVKGLCGEGRCYEADQLVVSMQKKG 689

Query: 411 VLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
            L P    +  L+ G  K    +SA  I   M   G       Y  LI +  ++    +A
Sbjct: 690 -LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEA 748

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD---LVAKI 525
           +    +M+E   +    ++  +++ L ++G      +++  M  +    N     ++A+ 
Sbjct: 749 QCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARE 808

Query: 526 LEAL 529
           L AL
Sbjct: 809 LSAL 812



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 199/447 (44%), Gaps = 20/447 (4%)

Query: 16  ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
            LVP    +N + N L      E A   F+W+   G      +T+ ++I+    +G +  
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP-STQTYNEIIKCFCLMGDIQK 430

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  I   M K G   +   +  LI  Y K+G +  ++++ +IMK  G++    +Y  L  
Sbjct: 431 AMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
              R G+   A   F  M+  GI P   TY  ++ G+F   K++ A+  F  M   G   
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLP 550

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
              TYN MI+G+++   + EAE    +M ++ + P VI+YT+ I G     R   A +IF
Sbjct: 551 SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF 610

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKM--VEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
            EM+  +  PN  TY++L+ GLC  G+    E+  +L  +      P  ++ +  L+   
Sbjct: 611 HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDT-YTTLVKGL 669

Query: 313 CKSGHLNAAADVLKAMIRLSI-PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           C  G    A  ++ +M +  + P+E  +  +LI   CK    + A+           I  
Sbjct: 670 CGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGE-CKNLKVESALN----------IFY 718

Query: 372 PQSTL--DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
              TL   +  S Y  +I  LC      +A+  F+ +++K    D V +  L+ G  KEG
Sbjct: 719 SMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEG 778

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICL 455
             D   +++ +M  R    +   Y+ L
Sbjct: 779 ETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 131/582 (22%), Positives = 244/582 (41%), Gaps = 15/582 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI IL + G++  A+ I+  + +     +   +  LI  + +   +  +  +FD M + G
Sbjct: 208 MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG 267

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + +  +Y  L   +   GR   A     +M+ +GIEPT +TY + L     +     A+
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
                MK RG   ++ T+  +I+G +R  K + A  L+ +M    + PT ++Y  +I   
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R + A  IF  M S    P+  TY  ++   C  G + +   +  +M++    P +
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP-N 446

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK G+LN A  +L+ M    +  +A  Y  LI  F +    + A  L  
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            ++E  I   P         +Y  +I    +  +   A   F ++++ G L     +N +
Sbjct: 507 GMMEHGI--SPNHV------TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G SK  +   A      M ++G+  +   Y   I+   R G    A      M +  +
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 481 SPASSLFRSVMESLFEDGRVQTAS--RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            P    + S++  L ++GR + A    ++  +   G + N+D    +++ L   G   EA
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678

Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI---IDLASYEKVLDA 595
              +  M + G  P+ +   ++L  + K +     L+     D +   + L+ Y+ ++ A
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
           L        A  I   ++EK   +D      L+ GL +EG T
Sbjct: 739 LCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGET 780


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/655 (22%), Positives = 289/655 (44%), Gaps = 51/655 (7%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           AW  +L+ ++R L+       V  VL    +   AL+FF W +R   + HD   +  M+E
Sbjct: 83  AWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLE 142

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           IL +      A+ +L  M K+ ++   + F  ++ SY + G ++ +++   +M++ G+E 
Sbjct: 143 ILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEP 202

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
            +   +    +++   R   A R+  +M    I P   TYN ++ G+    +LE A    
Sbjct: 203 DLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELI 262

Query: 185 EDMKSRGISLDVVTYNTMIN-----------------------------GYNRFKKM--- 212
            +M  +G S D ++Y T++                               YN F  M   
Sbjct: 263 AEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSK 322

Query: 213 ----DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
               DEA +   E +E+      + Y+ ++  +    R D A  I +EM S    P+ VT
Sbjct: 323 HGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVT 382

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           YT+++ GLC   K+ + +K+LR+M +    P   S +  LL   CK+G+   A +++   
Sbjct: 383 YTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVS-YTALLNGLCKNGNSLEAREMMNMS 441

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
                   A  Y +L+  F +      A  L+ ++++K     P           N +IQ
Sbjct: 442 EEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTP--------VEINLLIQ 493

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC   +  +A+ F  Q +  G  ++ V F  +I G  ++ + ++A  ++  M       
Sbjct: 494 SLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHP 553

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  +I++  +KG   +A      M+  G  P    +R+V+      GRV+   +++
Sbjct: 554 DVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLL 613

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEK 564
           + M+ +  +E      +++E L   G++E+A   +  ++++ S  + ++   L+     K
Sbjct: 614 EKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSK 671

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           G  + +  +      R+ I DL   EKV   L+  GK+  A  ++ + +E+G ++
Sbjct: 672 GIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRIS 726


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/592 (24%), Positives = 261/592 (44%), Gaps = 15/592 (2%)

Query: 30  LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
           L    +   AL+ F    +   F+ +   + +++  LGR G  +  + IL DM     + 
Sbjct: 57  LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
               F +LIESY +  +  E + + D M  + G++     Y+ +  L++      + +  
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
             KM   GI+P   T+NV++     + +L  AI   EDM S G+  D  T+ T++ GY  
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAV 267
              +D A ++  +M E     + +S   ++ G+    R +DAL    EM + D   P+  
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           T+  L+ GLC AG +    +++  M++    P D   +  ++   CK G +  A +VL  
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP-DVYTYNSVISGLCKLGEVKEAVEVLDQ 355

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           MI          Y  LI   CK    + A +L   L  K I+         +  ++N +I
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL--------PDVCTFNSLI 407

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
           Q LC       A   F ++  KG   D   +N LI     +G  D A  ++K M   G  
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
           R    Y  LI+ + +  +  +A+   D M   G S  S  + ++++ L +  RV+ A+++
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           M  M+ +G K +      +L      G +++A   +  M  +G  P+   + +L+S L +
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            G+   A KLL     +   +   +Y  V+  L    KT  A ++  +++E+
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 224/473 (47%), Gaps = 31/473 (6%)

Query: 3   ERAWTTRLQN-----------KIRALVPQFD---HNLVYNVL-HG---AKNSEHALQFFR 44
           E+ +TT +Q            +IR  + +F     N+  NV+ HG       E AL F +
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283

Query: 45  WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKK 104
            +     F  D+ T   ++  L + G + HA  I+  M ++G   D   +  +I    K 
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
           G V+E+V++ D M       +  +Y+ L   + +  +   A      + S+GI P   T+
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N ++ G  L+     A+  FE+M+S+G   D  TYN +I+      K+DEA  +  +M+ 
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
                +VI+Y T+I G+    +  +A  IFDEM+   V  N+VTY  L+ GLC + ++ +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             +++ +M+     P D   +  LL   C+ G +  AAD+++AM       +   YG LI
Sbjct: 524 AAQLMDQMIMEGQKP-DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
              CKA   + A KLL  +  K I L P         +YNP+IQ L    +T +A   FR
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPH--------AYNPVIQGLFRKRKTTEAINLFR 634

Query: 405 QLMKKGVLDP--VAFNNLIRGHSKEGNP--DSAFEIVKIMGRRGVPRDADAYI 453
           +++++    P  V++  + RG    G P  ++   +V+++ +  VP  +  Y+
Sbjct: 635 EMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYM 687



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/575 (22%), Positives = 252/575 (43%), Gaps = 55/575 (9%)

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
           LK++EI       +HA+     M   G++ D   F VLI++  +   ++ ++ + + M  
Sbjct: 170 LKLVEI-------SHAK-----MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G+    K++  + +  +  G    A R   +M+  G   +  + NV++ GF    ++E 
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277

Query: 180 AIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           A+ F ++M ++ G   D  T+NT++NG  +   +  A ++   M ++  +P V +Y ++I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G   +    +A+ + D+M + D  PN VTY  L+  LC   ++ E  ++ R +  + I 
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D   F  L+   C + +   A ++ + M       +   Y +LI++ C     D A+ 
Sbjct: 398 P-DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
           +L ++   E+    +S +     +YN +I   C   +T +AE  F ++   GV  + V +
Sbjct: 457 MLKQM---ELSGCARSVI-----TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI G  K    + A +++  M   G   D   Y  L+  + R G+   A   + +M  
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           +G  P    + +++  L + GRV+ AS++++S+  KG+         +++ L  +    E
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A+     M++    P                                D  SY  V   L 
Sbjct: 629 AINLFREMLEQNEAPP-------------------------------DAVSYRIVFRGLC 657

Query: 598 AAGKTL-NAYSILFKIMEKGGVTDWKSSDKLIAGL 631
             G  +  A   L +++EKG V ++ S   L  GL
Sbjct: 658 NGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 151/332 (45%), Gaps = 12/332 (3%)

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           +SG  +    +L+ M           + ILIE++ + E+ D  + ++D +++ E  L+P 
Sbjct: 95  RSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMID-EFGLKPD 153

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDS 432
           +        YN M+  L         EI   ++   G+  D   FN LI+   +      
Sbjct: 154 THF------YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  +++ M   G+  D   +  +++ Y+ +G+   A    + M+E G S ++     ++ 
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267

Query: 493 SLFEDGRVQTASRVMKSMVEK-GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
              ++GRV+ A   ++ M  + G   +      ++  L   GHV+ A+  +D+M+Q G  
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P+   ++S++S L + G+   AV++LD  + RDC  +  +Y  ++  L    +   A  +
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              +  KG + D  + + LI GL    N + A
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419


>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/563 (25%), Positives = 263/563 (46%), Gaps = 63/563 (11%)

Query: 82  MPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           MP   G   DE +F  ++   G+  +V++ +K+ D++ + G   S+K ++++  ++++  
Sbjct: 1   MPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKED 60

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
             +  + Y  KM+  G+    +T+ +++ G  L+ ++  A +  + MKSRG + + V YN
Sbjct: 61  IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYN 120

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           TMI+   +  K+  A  L  EM    +EP+ +++  +I  Y   E    AL + ++  S 
Sbjct: 121 TMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSM 176

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+ VT T ++  LC AG++ E  +VL E VE      D   +  L+   C  G    
Sbjct: 177 GFVPDVVTATKVVGILCKAGRVTEGVEVL-ERVESMGGVVDVVAYNTLIKGFCMLGKAKV 235

Query: 321 AADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
              VLK M I+  +P     Y IL   +C + M D AI L + +    I        +  
Sbjct: 236 GHRVLKDMEIKGCLP-NVDTYNILASGYCDSGMLDSAIDLFNDMKTDGI--------NWN 286

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFR--QLMKK------GVLDPVAFNNLIRGHSKEGNPD 431
             +Y+ +I+ LC     G+ E  F+  +LM++      G + P  +N++I G  K+   +
Sbjct: 287 FMTYDTLIRGLCSG---GRMEDGFKILELMEESRGGAGGRISP--YNSIIYGLYKKNQFE 341

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A E +  M  +  PR  D  +  I  +  +G   DAK   D MI++G  P+  ++  ++
Sbjct: 342 EALEFLTKM-EKLFPRAVDRSL-RILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLI 399

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
               +DG V+ A  ++  MV+ G                                   + 
Sbjct: 400 HGFCQDGNVREAFELINEMVDHGYFP--------------------------------TA 427

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
           P F++L+S    +GK  +A+KL++  +GR C+ D+ SY  ++DAL   G    A  +  +
Sbjct: 428 PTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQ 487

Query: 612 IMEKGGVTDWKSSDKLIAGLNQE 634
           ++EK  + D+ + + ++  L QE
Sbjct: 488 MVEKDILPDYSTWNSMLLCLTQE 510



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 173/379 (45%), Gaps = 20/379 (5%)

Query: 24  NLVYNVLHGAKNSEHAL-QFFRWVERAGL--FNHDRETHLKMIEILGRVGKLNHARCILL 80
           ++ +NVL  A   E  L Q    +E++    F  D  T  K++ IL + G++     +L 
Sbjct: 147 DVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLE 206

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            +   G   D   +  LI+ +   G  +   ++   M+  G   +V +Y+ L       G
Sbjct: 207 RVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSG 266

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVT- 198
               A   FN M ++GI     TY+ ++ G     ++E   +  E M +SRG +   ++ 
Sbjct: 267 MLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISP 326

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN++I G  +  + +EA +   +M++  + P  +  +  I G+       DA R++D+M 
Sbjct: 327 YNSIIYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMI 384

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGH 317
                P+ + Y  L+ G C  G + E  +++ EMV+  Y P      F  L+   C  G 
Sbjct: 385 KEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTA--PTFNALISAFCGQGK 442

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           + +A  +++ M+      + G Y  +++  C    + +A++L  ++VEK+I+        
Sbjct: 443 VGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDIL-------- 494

Query: 378 MEASSYNPMIQHLCHNGQT 396
            + S++N M+  LC   +T
Sbjct: 495 PDYSTWNSML--LCLTQET 511



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 1/164 (0%)

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+ +G S     F  +M+ L    R+  A ++++ M  +G   N  +   ++ AL   G 
Sbjct: 72  MMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGK 131

Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           V  A   ++ M++   V  F+ L+S   ++   + A+ LL+       + D+ +  KV+ 
Sbjct: 132 VGRARSLMNEMVEPSDV-TFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVG 190

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
            L  AG+      +L ++   GGV D  + + LI G    G  K
Sbjct: 191 ILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAK 234



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 3/197 (1%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N +   L+     E AL+F   +E+  LF    +  L+++      G +  A+ +   M
Sbjct: 327 YNSIIYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNE-GSIGDAKRVYDQM 383

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K+G      ++  LI  + + G V+E+ ++ + M   G   +  +++AL      +G+ 
Sbjct: 384 IKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKV 443

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +    M+  G  P   +Y+ M+         + A+R F  M  + I  D  T+N+M
Sbjct: 444 GSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSM 503

Query: 203 INGYNRFKKMDEAEKLF 219
           +    +     E + LF
Sbjct: 504 LLCLTQETVWLEGDNLF 520



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 45/214 (21%), Positives = 93/214 (43%), Gaps = 10/214 (4%)

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           K M   GV  D   +  L++         DA   L  M   G +P + ++ +++ +L ++
Sbjct: 70  KKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKN 129

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKIL-EALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
           G+V  A  +M  MVE       D+   +L  A     ++ +AL  ++     G VP+  +
Sbjct: 130 GKVGRARSLMNEMVEPS-----DVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVT 184

Query: 557 ---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
              ++ +L + G+    V++L+       ++D+ +Y  ++      GK    + +L  + 
Sbjct: 185 ATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDME 244

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
            KG + +  + + L +G    G    A D+ + M
Sbjct: 245 IKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDM 278


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 154/620 (24%), Positives = 279/620 (45%), Gaps = 17/620 (2%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  +L    +   A  +F+ V +   F H  +    M+EIL    ++     +   M KK
Sbjct: 101 VMTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKK 160

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
            +  +   +  + ++   KG +  +      M ++G   +  SY+ L  L+L  G    A
Sbjct: 161 VIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL-PGFCNEA 219

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            + + +M+SEG++P+  TY+ ++            +   E+MKS G+  ++ TY   I  
Sbjct: 220 LKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRA 279

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             R +++D+A  +F EM ++   P VI+YT +I    A  + D A  ++ +M++    P+
Sbjct: 280 LGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPD 339

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
            VTY  L+      G +  V++   EM V+ Y P  D   +  L+   CKSG ++ A D+
Sbjct: 340 RVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAP--DVVTYTILIEALCKSGDVDRAFDM 397

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L  M    I      Y  +I    KA   D A++LL+ +  + + ++P       A SY 
Sbjct: 398 LDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENM--ESLGVKPT------AFSYV 449

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL-IRGHSKEGNPDSAFEIVKIMGRR 443
             I +   +G   KA   F  + K+G++  +A  N  +   ++ G    A +I   + + 
Sbjct: 450 LFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKC 509

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  D+  Y  L++ Y + G+   A   L  MI  G  P   +  S++ +L++ GRV  A
Sbjct: 510 GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
            ++   +    +   +     +L  L   G + +AL     M +SG  PN   F+SLL  
Sbjct: 570 WKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDC 629

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           LS+      A+K+       +C  D+ +Y  ++  L+  G+   A+   F  M+K    D
Sbjct: 630 LSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAF-WFFHQMKKFLSPD 688

Query: 621 WKSSDKLIAGLNQEGNTKQA 640
           + +   LI G+ + G  + A
Sbjct: 689 YVTLCTLIPGVVRHGRVEDA 708



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 142/614 (23%), Positives = 267/614 (43%), Gaps = 47/614 (7%)

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            L   G+++ A  I  D+ K G+  D   + +L++ Y K G + ++ ++   M   G E  
Sbjct: 490  LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
            V   ++L   + + GR   A + F ++ +  + PT  TYN++L G     K+  A+  F 
Sbjct: 550  VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFG 609

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
             M   G   + +T+N++++  ++   +D A K+F  M   N  P V++Y T+I G +   
Sbjct: 610  SMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREG 669

Query: 246  RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
            R D A   F +MK F + P+ VT   L+PG+   G++ +  KV+ E V +     ++  +
Sbjct: 670  RIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFW 728

Query: 306  MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             +L+        +  A    + ++  S+  +      LI+  CK +    A  + DK   
Sbjct: 729  GELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFT- 787

Query: 366  KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
            K + + P  TL+    SYN ++  L  +  T KA   F  +   G   +   +N L+  H
Sbjct: 788  KNLGIHP--TLE----SYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAH 841

Query: 425  SKEGNPDSAFEIVKIMGRRGVPRDA--------------------DAYI----------- 453
             K    +  +++   M  RG   +A                    D Y            
Sbjct: 842  GKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTP 901

Query: 454  C----LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
            C    LI+  L+ G    A    + M++ G  P S ++  ++    + G +  A  + K 
Sbjct: 902  CTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKK 961

Query: 510  MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
            MV++G++ +L     ++E L + G ++EA+   + +  +G  P+   ++ +++ L +  +
Sbjct: 962  MVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRR 1021

Query: 567  TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
               A+ L      R    DL +Y  ++  L  AGK   A  +  ++   G      + + 
Sbjct: 1022 LDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNA 1081

Query: 627  LIAGLNQEGNTKQA 640
            LI G +  GN  QA
Sbjct: 1082 LIRGHSLSGNKDQA 1095



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 162/695 (23%), Positives = 295/695 (42%), Gaps = 62/695 (8%)

Query: 6   WTTRLQNKIRALVPQFDHN-LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           +  R   ++  ++  + +N L++ +L G  N   AL+ ++ +   G+     +T+  ++ 
Sbjct: 187 FALRKMTEVGFILNAYSYNGLIHLLLPGFCN--EALKVYKRMISEGM-KPSMKTYSALMV 243

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
            LGR G       +L +M   G++ +   + + I + G+   + ++  IF  M   G   
Sbjct: 244 ALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGP 303

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
            V +Y  L   +   G+   AK  + KM +    P R TY  ++  F     LET  RF+
Sbjct: 304 DVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFW 363

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M+  G + DVVTY  +I    +   +D A  +   M  K I P + +Y TMI G +  
Sbjct: 364 NEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKA 423

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            R D+AL + + M+S  VKP A +Y   +     +G   +       M +R I P   + 
Sbjct: 424 RRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAAC 483

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
              L  +  ++G ++ A D+   + +  +  ++  Y +L++ + KA   D+A +LL +++
Sbjct: 484 NASLYTLA-ETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI 542

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIR 422
            K          + +    N +I  L   G+   A   F +L K   L P  V +N L+ 
Sbjct: 543 SKGC--------EPDVMIINSLINTLYKAGRVDAAWKMFGRL-KNLKLAPTVVTYNILLT 593

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD--------------- 467
           G  KEG    A E+   M   G P +   +  L++  L K +  D               
Sbjct: 594 GLGKEGKILKALELFGSMTESGCPPNTITFNSLLDC-LSKNDAVDLALKMFCRMTMMNCN 652

Query: 468 -----AKTALDSMIEDGH---------------SPASSLFRSVMESLFEDGRVQTASRVM 507
                  T +  +I +G                SP      +++  +   GRV+ A +V+
Sbjct: 653 PDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVV 712

Query: 508 KSMVEKG-VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD----SLLSVLS 562
              V +  ++ N     +++E +L    +EEA+   ++++   SV   D     L+ VL 
Sbjct: 713 MEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILV-CNSVCQDDHVMLPLIKVLC 771

Query: 563 EKGKTIAAVKLLD-FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
           ++ K + A  + D F         L SY  ++D LL +  T  A   LF+ M+  G    
Sbjct: 772 KRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALE-LFEDMKSAGTHPN 830

Query: 622 KSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQ 656
             +  L+  L+  G +K+ + L  +     SRG +
Sbjct: 831 NFTYNLL--LDAHGKSKRINKLYDLYSEMRSRGCE 863



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 177/380 (46%), Gaps = 13/380 (3%)

Query: 87   VQWDEDMFEVLIESYGKKGIVQESVKIFD-IMKQLGVERSVKSYDALFKLILRRGRYMMA 145
            V  D+ +   LI+   K+    ++  +FD   K LG+  +++SY+ L   +L       A
Sbjct: 756  VCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKA 815

Query: 146  KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
               F  M S G  P   TYN++L     S ++      + +M+SRG   + +T+N +I+ 
Sbjct: 816  LELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISA 875

Query: 206  YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
              +   +++A  L+ E+   +  PT  +Y  +I G +   R++ A++IF+EM  +   PN
Sbjct: 876  LVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPN 935

Query: 266  AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            +V Y  L+ G   +G++    ++ ++MV+  I P D   +  L+   C +G ++ A    
Sbjct: 936  SVIYNILINGFGKSGEIDFACELFKKMVKEGIRP-DLKSYTILVECLCITGRIDEAVQYF 994

Query: 326  KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
            + +    +  +   Y  +I    K+   D A+ L  ++  + I          +  +YN 
Sbjct: 995  EELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGI--------SPDLYTYNA 1046

Query: 386  MIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I HL   G+   A   + +L   G L+P  F  N LIRGHS  GN D AF + K M   
Sbjct: 1047 LILHLGIAGKVDVAVKMYEELQLVG-LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVV 1105

Query: 444  GVPRDADAYICLIESYLRKG 463
            G   + + +  L   Y R G
Sbjct: 1106 GCSPNTETFAQLPNKYPRAG 1125



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 144/661 (21%), Positives = 276/661 (41%), Gaps = 52/661 (7%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + + +    L  A+  + A   F+ ++  G    D  T+  +I+ L   GKL+ A+ + +
Sbjct: 271 YTYTICIRALGRARRIDDAWGIFKEMDDEGC-GPDVITYTVLIDALCAAGKLDKAKELYV 329

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M       D   +  L++ +GK G ++   + ++ M+  G    V +Y  L + + + G
Sbjct: 330 KMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSG 389

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A    + M ++GI P  HTYN M+ G   + +L+ A+   E+M+S G+     +Y 
Sbjct: 390 DVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYV 449

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
             I+ Y +     +A   F  MK++ I P++ +    +       R  +A  IF+++   
Sbjct: 450 LFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKC 509

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P++VTY  L+     AG++ +  ++L EM+ +   P D  +   L+    K+G ++A
Sbjct: 510 GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEP-DVMIINSLINTLYKAGRVDA 568

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +   +  L +      Y IL+    K     +A++L   + E      P +T+    
Sbjct: 569 AWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGC---PPNTI---- 621

Query: 381 SSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            ++N ++  L  N     A ++F R  M     D + +N +I G  +EG  D AF     
Sbjct: 622 -TFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQ 680

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADA-KTALDSMIEDGHSPASSLFRSVMESLFEDG 498
           M +   P D      LI   +R G   DA K  ++ + +      S  +  +ME +  + 
Sbjct: 681 MKKFLSP-DYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEA 739

Query: 499 RVQTA---------------SRVMKSMVEK---------------------GVKENLDLV 522
            ++ A                 VM  +++                      G+   L+  
Sbjct: 740 EIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESY 799

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDF---CLG 579
             +++ LL     E+AL   + M  +G+ PN  +   +L   GK+    KL D       
Sbjct: 800 NCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRS 859

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
           R C  +  ++  ++ AL+ +     A  + +++M         +   LI GL + G ++Q
Sbjct: 860 RGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQ 919

Query: 640 A 640
           A
Sbjct: 920 A 920



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 1/250 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            HN++ + L  + N   AL  + +   +G F+    T+  +I+ L + G+   A  I  +M
Sbjct: 869  HNIIISALVKSNNLNKALDLY-YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM 927

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G   +  ++ +LI  +GK G +  + ++F  M + G+   +KSY  L + +   GR 
Sbjct: 928  LDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRI 987

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A +YF ++   G++P   +YN ++ G   S +L+ A+  F +MK+RGIS D+ TYN +
Sbjct: 988  DEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNAL 1047

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I       K+D A K++ E++   +EP+V +Y  +I+G+      D A  +F +M     
Sbjct: 1048 ILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGC 1107

Query: 263  KPNAVTYTAL 272
             PN  T+  L
Sbjct: 1108 SPNTETFAQL 1117



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 136/274 (49%), Gaps = 3/274 (1%)

Query: 23   HNLVYNVL---HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
            +N  YN+L   HG     + L       R+     +  TH  +I  L +   LN A  + 
Sbjct: 830  NNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLY 889

Query: 80   LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             ++           +  LI+   K G  ++++KIF+ M   G   +   Y+ L     + 
Sbjct: 890  YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKS 949

Query: 140  GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
            G    A   F KM+ EGI P   +Y +++    ++ +++ A+++FE++K  G+  D V+Y
Sbjct: 950  GEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSY 1009

Query: 200  NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            N +ING  + +++DEA  LF+EMK + I P + +Y  +I       + D A+++++E++ 
Sbjct: 1010 NFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQL 1069

Query: 260  FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
              ++P+  TY AL+ G   +G   +   V ++M+
Sbjct: 1070 VGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMM 1103



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 139/284 (48%), Gaps = 1/284 (0%)

Query: 81   DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            DM   G   +   + +L++++GK   + +   ++  M+  G E +  +++ +   +++  
Sbjct: 821  DMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSN 880

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                A   + +++S    PT  TY  ++ G   + + E A++ FE+M   G   + V YN
Sbjct: 881  NLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYN 940

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
             +ING+ +  ++D A +LF +M ++ I P + SYT +++      R D+A++ F+E+K  
Sbjct: 941  ILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLT 1000

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             + P+ V+Y  ++ GL  + ++ E   +  EM  R I P D   +  L+     +G ++ 
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISP-DLYTYNALILHLGIAGKVDV 1059

Query: 321  AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
            A  + + +  + +      Y  LI     +   D+A  +  K++
Sbjct: 1060 AVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMM 1103



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 95/190 (50%), Gaps = 5/190 (2%)

Query: 23   HNLVYNVL-HGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
            ++++YN+L +G   S   + A + F+ + + G+   D +++  ++E L   G+++ A   
Sbjct: 935  NSVIYNILINGFGKSGEIDFACELFKKMVKEGI-RPDLKSYTILVECLCITGRIDEAVQY 993

Query: 79   LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
              ++   G+  D   +  +I   GK   + E++ +F  MK  G+   + +Y+AL   +  
Sbjct: 994  FEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGI 1053

Query: 139  RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             G+  +A + + ++   G+EP+  TYN ++ G  LS   + A   F+ M   G S +  T
Sbjct: 1054 AGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTET 1113

Query: 199  YNTMINGYNR 208
            +  + N Y R
Sbjct: 1114 FAQLPNKYPR 1123


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 245/541 (45%), Gaps = 49/541 (9%)

Query: 13  KIRALVPQFDHNLVYNVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           KI  L  Q D      +LHG         AL  F  + R  +      T   ++  L R 
Sbjct: 137 KITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVV-----TFTTLMNGLCRE 191

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG-VERSVKS 128
           G++  A  +L  M + G+Q ++  +  +++   K G    ++ +   M+++  ++ +V  
Sbjct: 192 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVI 251

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y A+   + + GR+  A   + +M  +GI P   TYN M+ GF  S +   A R  ++M 
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            R I+ +VVTY+ +IN Y + +K  EAE+L+ EM  + I P  I+Y +MI G+    R D
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLD 371

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A  +F  M +    P+  T+  L+ G C A ++ +  ++L EM E  +   D + +  L
Sbjct: 372 AAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLV-ADTTTYNTL 430

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   C  G LNAA D+ + MI   +  +      L++  C       A+++   + + ++
Sbjct: 431 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490

Query: 369 IL---RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL------------- 412
            L   RP + ++ +  +YN +I  L + G+  +AE  ++++  +G++             
Sbjct: 491 DLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGL 550

Query: 413 -----------------------DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
                                  D V FN L+ G+ K G  D   E+   MGRRG+  DA
Sbjct: 551 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADA 610

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             YI LI  + + G    A      MI  G  P +   RS++  L+    ++ A  +++ 
Sbjct: 611 ITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLED 670

Query: 510 M 510
           +
Sbjct: 671 L 671



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 242/557 (43%), Gaps = 36/557 (6%)

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           + ++  M++  +   V S++ L K      +   A   F K+   G +P   T++ +L G
Sbjct: 97  ISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHG 156

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
             +  ++  A+  F  M       +VVT+ T++NG  R  ++ EA  L   M E  ++P 
Sbjct: 157 LCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPN 212

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            I+Y T++ G   +     AL +  +M+    +KPN V Y+A++ GL   G+  +   + 
Sbjct: 213 QITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLY 272

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            EM E+ I P D   +  ++   C SG  + A  +L+ M+   I      Y  LI  + K
Sbjct: 273 TEMQEKGIFP-DLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVK 331

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
              +  A +L D+++ + II  P +       +YN MI   C   +   AE  F  +  K
Sbjct: 332 ERKFFEAEELYDEMLPRGII--PNTI------TYNSMIDGFCKQNRLDAAEHMFYVMATK 383

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G   D   FN LI G+      D   E++  M   G+  D   Y  LI  +   G   D 
Sbjct: 384 GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVG---DL 440

Query: 469 KTALD---SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE-----------KG 514
             ALD    MI  G  P      ++++ L ++G+++ A  + K+M +            G
Sbjct: 441 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNG 500

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           V+ ++     ++  L+  G   EA      M   G VPN   + S+++ L ++ +   A 
Sbjct: 501 VEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEAT 560

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           ++ D    +    D+ ++  ++     AG+  +   +  ++  +G V D  +   LI G 
Sbjct: 561 QMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGF 620

Query: 632 NQEGNTKQA-DILSRMI 647
            + GN   A DI   MI
Sbjct: 621 RKVGNINGALDIFQEMI 637



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/502 (22%), Positives = 209/502 (41%), Gaps = 53/502 (10%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF-------- 133
           M +K +  D   F +LI+ +     +  ++  F  + +LG +  V ++  L         
Sbjct: 103 MERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDR 162

Query: 134 -----------------------KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
                                    + R GR + A    ++M+ +G++P + TY  ++ G
Sbjct: 163 VSEALDLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 222

Query: 171 FFLSLKLETAIRFFEDMKSRG-ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
                   +A+     M+    I  +VV Y+ +I+G  +  +  +A  L+ EM+EK I P
Sbjct: 223 MCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFP 282

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            + +Y  MI G+ +  R  +A R+  EM    + PN VTY+AL+       K  E +++ 
Sbjct: 283 DLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELY 342

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            EM+ R I P +   +  ++   CK   L+AA  +   M       +   +  LI+ +C 
Sbjct: 343 DEMLPRGIIP-NTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCG 401

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
           A+  D   +LL ++ E  ++         + ++YN +I   C  G    A    +Q++  
Sbjct: 402 AKRIDDGTELLHEMTETGLV--------ADTTTYNTLIHGFCLVGDLNAALDLSQQMISS 453

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-----------RGVPRDADAYICLIE 457
           GV  D V  N L+ G    G    A E+ K M +            GV  D   Y  LI 
Sbjct: 454 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILIS 513

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
             + +G+  +A+     M   G  P +  + S++  L +  R+  A+++  SM  K    
Sbjct: 514 GLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 573

Query: 518 NLDLVAKILEALLMRGHVEEAL 539
           ++     ++      G V++ L
Sbjct: 574 DVVTFNTLVSGYCKAGRVDDGL 595



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/493 (22%), Positives = 216/493 (43%), Gaps = 31/493 (6%)

Query: 170 GFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
           GF     LE AI  F DM +SR +   V+ +N ++    R ++ D    L+ +M+ K I 
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLP-SVIDFNKLMGVVVRMERPDLVISLYQKMERKQIP 109

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
             V S+  +IK + +  +   AL  F ++     +P+ VT++ LL GLC   ++ E   +
Sbjct: 110 CDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDL 169

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             +M    +       F  L+   C+ G +  A  +L  M+   +      YG +++  C
Sbjct: 170 FHQMCRPNV-----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 224

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A+ LL K+ E   I +P   +      Y+ +I  L  +G+   A   + ++ +
Sbjct: 225 KIGDTVSALNLLRKMEEMSHI-KPNVVI------YSAIIDGLWKDGRHSDAHNLYTEMQE 277

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KG+  D   +N +I G    G    A  +++ M  R +  +   Y  LI +Y+++ +  +
Sbjct: 278 KGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFE 337

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+   D M+  G  P +  + S+++   +  R+  A  +   M  KG   ++     +++
Sbjct: 338 AEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLID 397

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                  +++    +  M ++G V +   +++L+      G   AA+ L    +      
Sbjct: 398 GYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 457

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEK------------GGVTDWKSSDKLIAGLN 632
           D+ +   +LD L   GK  +A   +FK M+K            G   D ++ + LI+GL 
Sbjct: 458 DIVTCNTLLDGLCDNGKLKDALE-MFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLI 516

Query: 633 QEGNTKQADILSR 645
            EG   +A+ L +
Sbjct: 517 NEGKFLEAEELYK 529



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 88/176 (50%)

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           P  GV+ D   + +LI     +G   E+ +++  M   G+  +  +Y ++   + ++ R 
Sbjct: 497 PFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRL 556

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A + F+ M S+   P   T+N ++ G+  + +++  +  F +M  RGI  D +TY T+
Sbjct: 557 DEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITL 616

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           I+G+ +   ++ A  +F EM    + P  I+  +M+    + E    A+ + ++++
Sbjct: 617 IHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  MI  L +  +L+ A  +   M  K    D   F  L+  Y K G V + +++F  M
Sbjct: 542 TYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEM 601

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G+     +Y  L     + G    A   F +M+S G+ P   T   ML   +   +L
Sbjct: 602 GRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEEL 661

Query: 178 ETAIRFFEDMK 188
           + A+   ED++
Sbjct: 662 KRAVAMLEDLQ 672


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 153/634 (24%), Positives = 286/634 (45%), Gaps = 44/634 (6%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL---GRVGKLNHARCILLDM 82
           V ++L  A +   AL+ F    R     H  E+   M+E++   GRVG +     +   M
Sbjct: 71  VVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQ---VFDLM 127

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K+ V+ +   F  +    G +G ++ +     +M++ G+  +  +Y+ L   +++ G  
Sbjct: 128 QKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFD 187

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   +  M+ +GI P+  TY+V++  F     ++T +    +M++RG+  +V +Y   
Sbjct: 188 AEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTIC 247

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I    +  + DEA  +  +M++   +P V+++T +I+      R  DA  +F +MK+ D 
Sbjct: 248 IRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQ 307

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMV-ERYIPPKDNSV-FMKLLGVQCKSGHLNA 320
           KP+ VTY  LL    D+G    V +V   MV + Y    DN V +  ++   C+ G ++ 
Sbjct: 308 KPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGY---NDNIVSYTAVVDALCQVGRVDE 364

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  V   M    +  E   Y  LI  F KA+M+DRA++L +                M A
Sbjct: 365 ALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNH---------------MNA 409

Query: 381 SSYNP-------MIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI----RGHSKEGN 429
              +P        I +   +GQ+ KA   +  +  KG++  VA  N +     G  + G 
Sbjct: 410 CGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGM 469

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
               F  +K M   GV  D   Y  +I+   +  +  +A      M+E G  P      S
Sbjct: 470 AKRVFYELKAM---GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNS 526

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++++L++ G+   A ++   + E  ++        +L  L   G V+E +  ++ M ++ 
Sbjct: 527 LIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTI 586

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
             PN   ++++L  LS+ G+   A+ +L     + C  DL+SY  V+  L+   +   A+
Sbjct: 587 YPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAF 646

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             +F  M+K    D+ +   ++    + G  K+A
Sbjct: 647 R-MFCQMKKILAPDYATLCTILPSFVKNGLMKEA 679



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 142/617 (23%), Positives = 265/617 (42%), Gaps = 36/617 (5%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           +N +  ++  +++ L +VG+++ A  +  +M +KG+  ++  +  LI  + K  +   ++
Sbjct: 342 YNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRAL 401

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++F+ M   G   +  ++        + G+ + A + +  M S+GI P     N +L+  
Sbjct: 402 ELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSL 461

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             S +L  A R F ++K+ G+S D +TY  MI   ++  K DEA   F++M E    P V
Sbjct: 462 AGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDV 521

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++  ++I       + ++A ++F ++K   ++P   TY  LL GL   GK+ EV ++L E
Sbjct: 522 LALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEE 581

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M  R I P +   +  +L    K+G +N A D+L +M       +   Y  ++    K E
Sbjct: 582 MT-RTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEE 640

Query: 352 MYDRAIKLLDKL-----------------------------VEKEIILRPQSTLDMEASS 382
             + A ++  ++                               KE IL+    +D   SS
Sbjct: 641 RLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVD--KSS 698

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           ++ +++ +       K+  F   +  +G+ L+      LIR   K      A ++     
Sbjct: 699 FHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFK 758

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
             GV     +Y  LI   + +     A+     M   G  P    +  +++++ +  RV+
Sbjct: 759 GLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVE 818

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLL 558
              +V K M  KG +        I+  L+    +E+A+     +M  G  P    +  LL
Sbjct: 819 EMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLL 878

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
             L + GK + A  L +  L   C  +   Y  +L+    AG T N   +  K++E+G  
Sbjct: 879 DGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGIN 938

Query: 619 TDWKSSDKLIAGLNQEG 635
            D KS   LI  L   G
Sbjct: 939 PDIKSYTILIDTLCTAG 955



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 209/442 (47%), Gaps = 21/442 (4%)

Query: 16   ALVPQFDHN-LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
             ++P F  N L+   LH  K          ++ +AG  N D+ +   ++E + +   +  
Sbjct: 665  TILPSFVKNGLMKEALHTVK---------EYILKAGC-NVDKSSFHSLMEGILKKAGVEK 714

Query: 75   ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
            +     ++  +G+  ++     LI    K     E+ ++F+  K LGV     SY++L +
Sbjct: 715  SIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIR 774

Query: 135  LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
             ++      +A+  F +M   G  P   TYN++L     S+++E  ++  ++M  +G   
Sbjct: 775  GLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYES 834

Query: 195  DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
              VTYNT+I+G  + K++++A  L+  +  +   PT  +Y  ++ G +   +  DA  +F
Sbjct: 835  TYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLF 894

Query: 255  DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            +EM  +  +PN   Y  LL G   AG    V ++  +MVE+ I P D   +  L+   C 
Sbjct: 895  NEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINP-DIKSYTILIDTLCT 953

Query: 315  SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            +G LN      + +  L +  +   Y +LI+   K+E  + A+ L +++ +K II     
Sbjct: 954  AGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGII----- 1008

Query: 375  TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSA 433
                   +YN +I HL   G+  +A   + +L++KG    V  +N LIRG+S  G+ D+A
Sbjct: 1009 ---PNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNA 1065

Query: 434  FEIVKIMGRRGVPRDADAYICL 455
            +     M   G   ++  Y+ L
Sbjct: 1066 YAAYGQMIVGGCQPNSSTYMQL 1087



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 149/686 (21%), Positives = 285/686 (41%), Gaps = 62/686 (9%)

Query: 1    MAERAWTTRLQNKIRALVPQ---FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE 57
            M +RA    L N + A  P    + H L  N    +  S  A+Q +  ++  G+      
Sbjct: 396  MFDRAL--ELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAA 453

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
             +  +  + G  G+L  A+ +  ++   GV  D   + ++I+   K     E++  F  M
Sbjct: 454  ANAVLYSLAGS-GRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM 512

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
             + G    V + ++L   + + G+   A + F+K+    IEPT  TYN +L G     K+
Sbjct: 513  VESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKV 572

Query: 178  ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            +  ++  E+M       +++TYNT+++  ++  +++ A  +   M EK   P + SY T+
Sbjct: 573  KEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTV 632

Query: 238  IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
            + G +  ER ++A R+F +MK   + P+  T   +LP     G M E    ++E + +  
Sbjct: 633  MYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAG 691

Query: 298  PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
               D S F  L+    K   +  + +  + +    I         LI + CK +    A 
Sbjct: 692  CNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAH 751

Query: 358  KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG------- 410
            +L +K     + L+          SYN +I+ L        AE  F ++ + G       
Sbjct: 752  QLFNKFKGLGVSLK--------TGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFT 803

Query: 411  ---VLDP--------------------------VAFNNLIRGHSKEGNPDSAFEIVKIMG 441
               +LD                           V +N +I G  K    + A ++   + 
Sbjct: 804  YNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLM 863

Query: 442  RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
              G       Y  L++  L+ G+  DA+   + M+E G  P  +++  ++      G  +
Sbjct: 864  SEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTE 923

Query: 502  TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
               ++ + MVE+G+  ++     +++ L   G + + L     + + G  P+   ++ L+
Sbjct: 924  NVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLI 983

Query: 559  SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
              L +  +   AV L +    +  I +L +Y  ++  L  AGK   A  +  +++ KG  
Sbjct: 984  DGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKG-- 1041

Query: 619  TDWKSS----DKLIAGLNQEGNTKQA 640
              WK S    + LI G +  G+T  A
Sbjct: 1042 --WKPSVFTYNALIRGYSVSGSTDNA 1065



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 117/578 (20%), Positives = 228/578 (39%), Gaps = 87/578 (15%)

Query: 24   NLVYNVLHGAKNSE----HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
            N  YN L      E      +Q    + R  ++  +  T+  +++ L + G++N A  +L
Sbjct: 556  NGTYNTLLSGLGREGKVKEVMQLLEEMTRT-IYPPNLITYNTVLDCLSKNGEVNCAIDML 614

Query: 80   LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
              M +KG   D   +  ++    K+  ++E+ ++F  MK++ +     +   +    ++ 
Sbjct: 615  YSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKN 673

Query: 140  GRYMMAKRYFNK-MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G    A     + +L  G    + +++ ++ G      +E +I F E++ SRGI L+   
Sbjct: 674  GLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFF 733

Query: 199  YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
               +I    + KK  EA +LF + K   +     SY ++I+G V     D A  +F EMK
Sbjct: 734  LCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMK 793

Query: 259  SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
                 P+  TY  +L  +   GK + V+++L+                            
Sbjct: 794  RLGCGPDEFTYNLILDAM---GKSMRVEEMLK---------------------------- 822

Query: 319  NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
                 V K M R    +    Y  +I    K++  ++AI L   L+ +     P      
Sbjct: 823  -----VQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP------ 871

Query: 379  EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
               +Y P++  L  +G+   AE  F ++++ G   +   +N L+ GH   GN ++  ++ 
Sbjct: 872  --CTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLF 929

Query: 438  KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
            + M  +G+  D  +Y  LI++    G   D       + E G  P   ++  +++ L + 
Sbjct: 930  EKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKS 989

Query: 498  GRVQTASRVMKSMVEKGVKENLDLVAKILEAL---------------------------- 529
             R++ A  +   M +KG+  NL     ++  L                            
Sbjct: 990  ERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTY 1049

Query: 530  --LMRGH-----VEEALGRIDLMMQSGSVPNFDSLLSV 560
              L+RG+      + A      M+  G  PN  + + +
Sbjct: 1050 NALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 97/182 (53%), Gaps = 1/182 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N++ N    A N+E+  Q F  +   G+ N D +++  +I+ L   G+LN   C    +
Sbjct: 909  YNILLNGHRIAGNTENVCQLFEKMVEQGI-NPDIKSYTILIDTLCTAGRLNDGLCYFRQL 967

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + G++ D  ++ +LI+  GK   ++E+V +F+ MK+ G+  ++ +Y++L   + + G+ 
Sbjct: 968  HELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKA 1027

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A + + ++L +G +P+  TYN ++ G+ +S   + A   +  M   G   +  TY  +
Sbjct: 1028 AEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087

Query: 203  IN 204
             N
Sbjct: 1088 PN 1089


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/545 (23%), Positives = 238/545 (43%), Gaps = 17/545 (3%)

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
           Q ++  F      G + S  + +   + +L  G        F +ML  G  P  +TY+++
Sbjct: 107 QTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLV 166

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           +       +++ A    +  K RG   +V  Y  +   + +  ++ +A ++F     +NI
Sbjct: 167 IKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF-----RNI 221

Query: 228 -EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             P  I+Y  +I G+      D AL    EM    V P+  TY  L+ GLC A K  +  
Sbjct: 222 PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKAS 281

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           ++L EMV+R + P D   F  ++   CK+G    A  +L  M   +       Y  LI  
Sbjct: 282 EMLHEMVDRGVTP-DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISG 340

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK +  DRA  L+D+ V    +         +  +Y+ +   LC  G+  +A    +++
Sbjct: 341 LCKQQNVDRAKDLVDEFVSSGFV--------PDVVTYSILADGLCKRGRIDEAFELVKEM 392

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
             KG   + V +N LI G  K    + A+E+++ +   G   D   Y  +++   ++G  
Sbjct: 393 SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL 452

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A   ++ M++ G +P+   + ++ME L   GRV  A  + K MV K    +      +
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 512

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           +         +EA   +D +  +  +  +++L+    ++G+      + +    R C+ +
Sbjct: 513 VNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 572

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
           + +Y  V+D L   GK   A+  L  +   G V D  S + +I GL +    K+A  +L 
Sbjct: 573 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 632

Query: 645 RMIRG 649
           +MI+ 
Sbjct: 633 QMIQA 637



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 277/604 (45%), Gaps = 28/604 (4%)

Query: 7   TTRLQNKIRAL--VPQFDHNLVYN-VLHG---AKNSEHALQFFRWVERAGLFNHDRETHL 60
           T RL++ +     +P  D  + YN ++HG     + + AL+F + +    +   D  T+ 
Sbjct: 208 TGRLKDALEIFRNIPSPDA-IAYNAIIHGHCRKNDCDGALEFLKEMNERKV-APDVFTYN 265

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            +I+ L +  K + A  +L +M  +GV  D   F  +++   K G  + +  +  +M + 
Sbjct: 266 ILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 325

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
               S  +Y+ L   + ++     AK   ++ +S G  P   TY+++  G     +++ A
Sbjct: 326 NCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEA 385

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
               ++M  +G + ++VTYNT+I+G  +  K ++A +L   +      P V++YT ++ G
Sbjct: 386 FELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDG 445

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                R D AL++ + M      P+ +TYTAL+ GLC  G++ E   + +EMV +     
Sbjct: 446 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC-TA 504

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   ++ L+   CKS     A  V+   IR +   +   Y  L++ +CK    D    + 
Sbjct: 505 DALAYVSLVNGYCKSSRTKEAQKVVDG-IRGTPYIDV--YNALMDGYCKEGRLDEIPNVF 561

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNN 419
           + +  +  +            +YN ++  LC +G+  +A  F   +   G V D V++N 
Sbjct: 562 EDMACRGCV--------PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 613

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +I G  K   P  A +++  M + G+P DA  Y  L+  + ++    DA   L +MI+ G
Sbjct: 614 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG-VKENLDLVAKILEALLMRGHVEEA 538
             P +  + +++  L +  R+  A  +M  M+  G V         I++ L   G +++A
Sbjct: 674 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQA 733

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           L  +D M   G   N   ++  +  L ++G+   A  LL      D + D  SY  V+  
Sbjct: 734 LLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS---EMDTLRDEVSYTTVIIG 790

Query: 596 LLAA 599
           L  A
Sbjct: 791 LCKA 794



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 150/689 (21%), Positives = 292/689 (42%), Gaps = 73/689 (10%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F  N     L    +S+     F  +  AG +  D  T+  +I+ L ++ +++ A  +L 
Sbjct: 126 FTRNCFLQTLLENGSSDRIPAMFERMLDAG-YAPDSYTYHLVIKSLCQMNQIDKAFTMLD 184

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
               +G + +  ++ +L  ++ K G ++++++IF   + +    ++ +Y+A+     R+ 
Sbjct: 185 KAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF---RNIPSPDAI-AYNAIIHGHCRKN 240

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A  +  +M    + P   TYN+++ G   + K + A     +M  RG++ D VT+N
Sbjct: 241 DCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFN 300

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA---VERA---------- 247
           ++++G  +  K + A  L A M E+N  P+  +Y T+I G      V+RA          
Sbjct: 301 SIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSS 360

Query: 248 ----------------------DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
                                 D+A  +  EM      PN VTY  L+ GLC A K  + 
Sbjct: 361 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKA 420

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            ++L  +V     P D   +  ++   CK G L+ A  +++ M++         Y  L+E
Sbjct: 421 YELLESLVSSGFVP-DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALME 479

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRP-----------QSTLDMEASS------------ 382
             C+    D A  +  ++V K+                +S+   EA              
Sbjct: 480 GLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYID 539

Query: 383 -YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIM 440
            YN ++   C  G+  +    F  +  +G +  +  +N ++ G  K G  D AF  ++ M
Sbjct: 540 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 599

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G   D  +Y  +I+   +  +P +A+  LD MI+ G  P +  + ++M    ++ R 
Sbjct: 600 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 659

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV----PNFDS 556
             A  ++K+M++ GV  +      ++  L     + +A   +  M+++G V      +++
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 719

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           ++  L ++G    A+ L+D   G     +  +Y   +D L   G+   A S+L    E  
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL---SEMD 776

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            + D  S   +I GL +     +A  L+R
Sbjct: 777 TLRDEVSYTTVIIGLCKAEQLDRASKLAR 805



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 162/662 (24%), Positives = 281/662 (42%), Gaps = 73/662 (11%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P  F +N++ + L  A  ++ A +    +   G+   D  T   +++ L + GK  
Sbjct: 255 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV-TPDTVTFNSIMDGLCKAGKFE 313

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +L  M ++  +     +  LI    K+  V  +  + D     G    V +Y  L 
Sbjct: 314 RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILA 373

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + +RGR   A     +M  +G  P   TYN ++ G   + K E A    E + S G  
Sbjct: 374 DGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFV 433

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DVVTY  +++G  +  ++D+A K+   M ++   P+VI+YT +++G     R D+A  I
Sbjct: 434 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 493

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F EM S D   +A+ Y +L+ G C + +  E QKV+  +  R  P  D  V+  L+   C
Sbjct: 494 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGTPYID--VYNALMDGYC 549

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL---------V 364
           K G L+   +V + M           Y I+++  CK    D A   L+ +         V
Sbjct: 550 KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVV 609

Query: 365 EKEIIL-------RP-----------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
              II+       +P           Q+ +  +A +YN ++   C   +   A    + +
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 669

Query: 407 MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYICLIESYLRKG 463
           +K GV DP  V +N LI G S+      A+E++  M R G V      Y  +I+   ++G
Sbjct: 670 IKAGV-DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 728

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM-----------VE 512
               A   +D M   G    +  +   ++ L ++GR+  AS ++  M           V 
Sbjct: 729 CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVI 788

Query: 513 KGV--KENLDLVAKI------LEALLMRGH--------------VEEALGRIDLMMQSGS 550
            G+   E LD  +K+      ++ L +  H              ++EAL  + LM+Q G 
Sbjct: 789 IGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGC 848

Query: 551 VPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
            P+   ++ +++ L +  K   A +L D    R  +    SY  ++  L   G+   A  
Sbjct: 849 SPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQ 908

Query: 608 IL 609
           +L
Sbjct: 909 VL 910



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 197/455 (43%), Gaps = 16/455 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++E L R G+++ A  I  +M  K    D   +  L+  Y K    +E+ K+ D +
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 532

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +       +  Y+AL     + GR       F  M   G  P   TYN+++ G     K+
Sbjct: 533 RGTPY---IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 589

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A  F E M S G   DVV+YN +I+G  +  K  EA ++  +M +  I P  ++Y T+
Sbjct: 590 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 649

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +  +   ER DDA+ I   M    V P+ VTY  L+ GL    ++ +  +++ EM+    
Sbjct: 650 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 709

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
                + +  ++   CK G L  A  ++  M    +      Y I I+  CK    D A 
Sbjct: 710 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 769

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGV-LDPV 415
            LL ++           TL  E  SY  +I  LC   Q  +A    R+++  KG+ +   
Sbjct: 770 SLLSEM----------DTLRDEV-SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 818

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            FN LI   +K    D A  ++ +M +RG       Y  +I    +  +   A    D M
Sbjct: 819 TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
              G   +S  +  ++  L   GR + A +V++ M
Sbjct: 879 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 121/530 (22%), Positives = 235/530 (44%), Gaps = 21/530 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L  A  +E A +    +  +G F  D  T+  +++ L + G+L+ A  ++  M
Sbjct: 404 YNTLIDGLCKASKTEKAYELLESLVSSG-FVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K+G       +  L+E   + G V E+  IF  M          +Y +L     +  R 
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRT 522

Query: 143 MMAKRYFNKMLSEGIEPTRH--TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
             A++     + +GI  T +   YN ++ G+    +L+     FEDM  RG   ++ TYN
Sbjct: 523 KEAQK-----VVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYN 577

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +++G  +  K+DEA      M      P V+SY  +I G     +  +A ++ D+M   
Sbjct: 578 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 637

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+AVTY  L+   C   +  +   +L+ M++  + P DN  +  L+    ++  L  
Sbjct: 638 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP-DNVTYNTLISGLSQTNRLGD 696

Query: 321 AADVLKAMIRL-SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           A +++  M+R   + +    Y  +I+  CK     +A+ L+D +    +        +  
Sbjct: 697 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGV--------EAN 748

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
             +YN  I  LC  G+  +A     ++    + D V++  +I G  K    D A ++ + 
Sbjct: 749 TVTYNIFIDRLCKEGRLDEASSLLSEM--DTLRDEVSYTTVIIGLCKAEQLDRASKLARE 806

Query: 440 M-GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
           M   +G+   +  +  LI+++ +     +A T L  M++ G SP+   +  V+  L +  
Sbjct: 807 MVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLD 866

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           +V  A  +   M  +G+  +      ++  L  +G  +EAL  ++ M  S
Sbjct: 867 KVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASS 916



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 198/447 (44%), Gaps = 19/447 (4%)

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           R K    A   F    ++  + +  +    ++  +    +D    +F+ M      P++ 
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           TY  ++  LC   ++ +   +L +   R   P + SV+  L    CK+G L  A ++ + 
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKP-EVSVYTILTRAFCKTGRLKDALEIFR- 219

Query: 328 MIRLSIPT-EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
               +IP+ +A  Y  +I   C+    D A++ L ++ E+++          +  +YN +
Sbjct: 220 ----NIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVA--------PDVFTYNIL 267

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC   +T KA     +++ +GV  D V FN+++ G  K G  + A  ++ +M  R  
Sbjct: 268 IDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNC 327

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
                 Y  LI    ++     AK  +D  +  G  P    +  + + L + GR+  A  
Sbjct: 328 RPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFE 387

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           ++K M  KG   NL     +++ L      E+A   ++ ++ SG VP+   +  ++  L 
Sbjct: 388 LVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLC 447

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           ++G+   A+K+++  L R C   + +Y  +++ L   G+   A+ I  +++ K    D  
Sbjct: 448 KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADAL 507

Query: 623 SSDKLIAGLNQEGNTKQADILSRMIRG 649
           +   L+ G  +   TK+A  +   IRG
Sbjct: 508 AYVSLVNGYCKSSRTKEAQKVVDGIRG 534



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 10/270 (3%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEH----ALQFFRWVERAGLFNHDRETHLKMIEI 65
           L+N I+A V     N+ YN L    +  +    A +    + R G       T+  +I+ 
Sbjct: 666 LKNMIKAGVDP--DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDR 723

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L + G L  A  ++  M   GV+ +   + + I+   K+G + E+  +   M  L   R 
Sbjct: 724 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RD 780

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLS-EGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
             SY  +   + +  +   A +   +M++ +G+  T HT+N+++  F  + +L+ A+   
Sbjct: 781 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
             M  RG S  V+TYN +I    +  K+D+A +LF EM  + I  + +SYT +I G    
Sbjct: 841 GLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 900

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLP 274
            R  +AL++ +EM S D + + + +  + P
Sbjct: 901 GRGKEALQVLEEMASSDCEIDDLKWEDVAP 930



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 154/358 (43%), Gaps = 8/358 (2%)

Query: 14  IRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
            R  VP    +N+V + L      + A  F   +  AG    D  ++  +I+ L +  K 
Sbjct: 566 CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCV-PDVVSYNIIIDGLFKASKP 624

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
             AR +L  M + G+  D   +  L+  + K+    ++V I   M + GV+    +Y+ L
Sbjct: 625 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 684

Query: 133 FKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
              + +  R   A    ++ML  G +     TYN ++        L+ A+   + M   G
Sbjct: 685 ISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG 744

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           +  + VTYN  I+   +  ++DEA  L +EM     E   +SYTT+I G    E+ D A 
Sbjct: 745 VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDE---VSYTTVIIGLCKAEQLDRAS 801

Query: 252 RIFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           ++  EM +   +   + T+  L+       ++ E   +L  MV+R   P   +  M ++ 
Sbjct: 802 KLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNM-VIT 860

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
             CK   ++ A ++   M    I   +  Y +LI   C       A+++L+++   + 
Sbjct: 861 CLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 918


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 226/486 (46%), Gaps = 47/486 (9%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR-RGRYMMAKRYFNK 151
           +F+++++S      +++++ I D+ K  G    V SY+A+   I+R R   + A++ + +
Sbjct: 134 VFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYRE 193

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M++ G+     +YN+++ GF  +  LE  +RFFE+M+      +VVTYNT+I  Y + K+
Sbjct: 194 MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           +DEA KL   M  + +EP +++Y  +I G   V R ++   +  EM      P+ VTY  
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           L+ G C  G   +   +  EM+   +PP D   +  L+   CK+G+LN A +    M   
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPP-DVVTYTSLINTMCKAGNLNRAMEFFDQMHVR 372

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            +      Y  LI  F +    D A ++ D+++                S + P I    
Sbjct: 373 GLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIR---------------SGFPPTI---- 413

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                                  V +N L+ GH   G  + A  +++ M  +G+  D  +
Sbjct: 414 -----------------------VTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVS 450

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  +I  + R  E   A      M+E G SP +  + S+++ L E  R+  A  + + M+
Sbjct: 451 YSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEML 510

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
            K +  +      ++      G + EAL   D M++ G +P+   ++ L++ L+++ +T 
Sbjct: 511 NKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTR 570

Query: 569 AAVKLL 574
            A +LL
Sbjct: 571 EAKRLL 576



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 232/497 (46%), Gaps = 25/497 (5%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   GV  +   + +LI  +   G ++  ++ F+ M++     +V +Y+ +     +  
Sbjct: 193 EMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLK 252

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A +    M  EG+EP   TYN+++ G     ++E       +M  +G + D VTYN
Sbjct: 253 RIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYN 312

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T++NGY +     +A  L +EM    + P V++YT++I         + A+  FD+M   
Sbjct: 313 TLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR 372

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            ++PN VTYT+L+ G    G M E  ++  EM+    PP     +  LL   C SG +  
Sbjct: 373 GLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTI-VTYNALLNGHCVSGRMEE 431

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +L+ M    +  +   Y  +I  FC+ +  DRA ++  ++VEK +          +A
Sbjct: 432 AIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV--------SPDA 483

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y+ +IQ LC   +  +A   F++++ K +L D   + +LI G+ KEG+ + A  +   
Sbjct: 484 ITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDE 543

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE--- 496
           M ++G   D   Y  LI    ++    +AK  L  +  D   P    + +++ES  +   
Sbjct: 544 MIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEF 603

Query: 497 ------------DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
                        G +  A +V +SM+++  K N  +   I+      G+V +A      
Sbjct: 604 KSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKE 663

Query: 545 MMQSGSVPNFDSLLSVL 561
           M+  G +P+  ++++++
Sbjct: 664 MVDFGFIPHTVTIIALV 680



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 234/502 (46%), Gaps = 14/502 (2%)

Query: 25  LVYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN + GA    K  + A +  R +   GL   +  T+  +I  L RVG++     +L 
Sbjct: 239 VTYNTVIGAYCKLKRIDEAFKLLRSMGLEGL-EPNLLTYNMVINGLCRVGRIEETSGVLA 297

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M +KG   D   +  L+  Y K G   +++ +   M + G+   V +Y +L   + + G
Sbjct: 298 EMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAG 357

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A  +F++M   G+ P   TY  ++ GF     ++ A R +++M   G    +VTYN
Sbjct: 358 NLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYN 417

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            ++NG+    +M+EA  L   M+ K + P V+SY+T+I G+   +  D A ++  EM   
Sbjct: 418 ALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEK 477

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+A+TY++L+ GLC+  ++ E   + +EM+ + + P D   +  L+   CK G LN 
Sbjct: 478 GVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLP-DEFTYTSLINGYCKEGDLNE 536

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP-------Q 373
           A ++   MI+     +   Y +LI    K      A +LL KL   E I          +
Sbjct: 537 ALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE 596

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDS 432
           S  D+E  S   +I+  C  G   +A+  F  ++K+    +   +N +I GH ++GN   
Sbjct: 597 SCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHK 656

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A ++ K M   G        I L+++   +G        +  ++       + L +++++
Sbjct: 657 AHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQ 716

Query: 493 SLFEDGRVQTASRVMKSMVEKG 514
              ++G +     ++  M + G
Sbjct: 717 INHKEGNIDAVFNLLTEMAKDG 738


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/564 (25%), Positives = 255/564 (45%), Gaps = 57/564 (10%)

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           + +L R G+  H + + L   ++ V  +E  +  LI    K G + ++ ++ D M+  G+
Sbjct: 5   LNLLVRAGQ--HGQAVQLFREERCVP-NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
              V  ++ + + + + GR+  A  YF  +      P   T+N+++     S ++E A +
Sbjct: 62  PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 183 FFEDMKSRGISL-DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            FE M +    L +VVTY T+ING  +  K+D A +L   M E    P VI+Y+ +++G 
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R D    +  EM     +P+ + Y  LL GL                         
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL------------------------- 216

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
                      CKS  L+ A ++++ MIR         Y  L+E FC+++  DRA +L+ 
Sbjct: 217 -----------CKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAFNNL 420
            + E+     P   ++     YN +I  LC + +   A+   +Q++  + V D + ++ +
Sbjct: 266 VMSERGC---PPDVIN-----YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317

Query: 421 IRGHSKEGNPD------SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           I G  K+   D      +A EI+++M + G P +A  Y  +IE   R  +   A   L  
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           MI+    P  S F  V+ SL +   +  A ++   M E+  K N    A +++ L   G 
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437

Query: 535 VEEALGRIDLMMQS--GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           V++A+   +LM++S    V  ++S+L  L   G+   AV++++  + ++C  D ASY  +
Sbjct: 438 VDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 593 LDALLAAGKTLNAYSILFKIMEKG 616
           +  L        AY +   +  KG
Sbjct: 498 IRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 208/464 (44%), Gaps = 17/464 (3%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N++ + L  +   E A Q F  +  +     +  T+  +I  L + GKL+ A  +L  M 
Sbjct: 104 NILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMN 163

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           + G   +   + VL+E   K G   +   +   M + G +  V  Y+ L   + +  R  
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLD 223

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A      M+  G  PT  TYN ++  F  S +++ A R  + M  RG   DV+ YNT+I
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD------DALRIFDEM 257
            G  R  ++D+A+ L  +M      P VI+Y+T+I G     R D       A  I + M
Sbjct: 284 AGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMM 343

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           K     PNA TY  ++ GLC A K  +   +LR M++  + P D S F  ++G  CKS  
Sbjct: 344 KQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP-DLSSFSMVIGSLCKSHD 402

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           L+AA  +   M           Y  LI+   K    D+A+++ + +VE     RP     
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES---FRPG---- 455

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
              ++YN ++  LC  G+  +A      ++ K    D  ++  LIRG  +    + A+E+
Sbjct: 456 --VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYEL 513

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
            + +  +G   +   Y  L+    +K   +DA    + +IE G+
Sbjct: 514 FQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 132/570 (23%), Positives = 254/570 (44%), Gaps = 59/570 (10%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N   N+L  A     A+Q FR  ER      +  T+  +I  L + GKL+ A  +L +M 
Sbjct: 2   NCALNLLVRAGQHGQAVQLFRE-ERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 84  KKGV-----------------------------------QWDEDMFEVLIESYGKKGIVQ 108
            +G+                                     D   F +L+++  K G V+
Sbjct: 58  DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 109 ESVKIFDIMKQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
           E+ +IF+ M        +V +Y  +   + + G+   A    + M   G  P   TY+V+
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           + G   + + +      ++M  RG   DV+ YNT++NG  + +++DEA +L   M     
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            PTV++Y ++++ +   ++ D A R+   M      P+ + Y  ++ GLC   ++ + Q 
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 288 VLREMV-ERYIPPKDNSVFMKLLGVQCKSGH------LNAAADVLKAMIRLSIPTEAGHY 340
           +L++MV  R +P  D   +  ++   CK         L AA ++L+ M +   P  AG Y
Sbjct: 298 LLKQMVAARCVP--DVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA- 399
            ++IE  C+A    +A+ LL ++++ E++         + SS++ +I  LC +     A 
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVV--------PDLSSFSMVIGSLCKSHDLDAAY 407

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
           +IF     ++   +PVA+  LI G SK G  D A  + ++M     P  A  Y  +++  
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVA-TYNSVLDGL 466

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
              G   +A   ++ MI     P  + + +++  L     V+ A  + +++  KG    +
Sbjct: 467 CGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEV 526

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSG 549
            +   ++  L  +  + +A G  + ++++G
Sbjct: 527 GVYNVLVNELCKKKRLSDAHGVANKLIEAG 556


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 212/430 (49%), Gaps = 12/430 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + L+  +    K SE  +   R VE       D  T+  ++  + R G  + A  +L  M
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENG--CQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ V+ D   +  +I+S  + G +  ++ +F  M+  G++ SV +Y++L + + + G++
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                    M+S  I P   T+NV+L  F    KL+ A   +++M +RGIS +++TYNT+
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++GY    ++ EA  +   M      P ++++T++IKGY  V+R DD +++F  +    +
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             NAVTY+ L+ G C +GK+   +++ +EMV   + P D   +  LL   C +G L  A 
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGILLDGLCDNGKLEKAL 458

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++ + + +  +      Y  +IE  CK    + A  L   L        P   +     +
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL--------PCKGVKPNVMT 510

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  MI  LC  G   +A I  R++ + G   +   +N LIR H ++G+  ++ ++++ M 
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570

Query: 442 RRGVPRDADA 451
             G   DA +
Sbjct: 571 SCGFSADASS 580



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 250/545 (45%), Gaps = 19/545 (3%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D +  ++ +   K     L F + +E  G+  H+  T   MI    R  K   
Sbjct: 83  RPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI-AHNIYTLNIMINCFCRCCKTCF 141

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +L  + K G + D   F  LI+    +G V E+V + D M + G +  V +Y+++  
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            I R G   +A     KM    ++    TY+ ++        ++ AI  F++M+++GI  
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            VVTYN+++ G  +  K ++   L  +M  + I P VI++  ++  +V   +  +A  ++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM +  + PN +TY  L+ G C   ++ E   +L  MV     P D   F  L+   C 
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP-DIVTFTSLIKGYCM 380

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              ++    V + + +  +   A  Y IL++ FC++     A +L  ++V   ++  P  
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL--P-- 436

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
               +  +Y  ++  LC NG+  KA   F  L K  + L  V +  +I G  K G  + A
Sbjct: 437 ----DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           + +   +  +GV  +   Y  +I    +KG  ++A   L  M EDG++P    + +++ +
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552

Query: 494 LFEDGRVQTASRVMKSMVEKG-------VKENLDLVAKILEALLMRGHVEE-ALGRIDLM 545
              DG +  ++++++ M   G       +K  +D++   ++ L +R  + + +  R DL+
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLL 612

Query: 546 MQSGS 550
             SGS
Sbjct: 613 ELSGS 617



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 237/506 (46%), Gaps = 16/506 (3%)

Query: 113 IFDIMKQL---GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
           + D  KQL   G+  ++ + + +     R  +   A     K++  G EP   T+N ++ 
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G FL  K+  A+   + M   G   DVVTYN+++NG  R      A  L  +M+E+N++ 
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            V +Y+T+I         D A+ +F EM++  +K + VTY +L+ GLC AGK  +   +L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
           ++MV R I P +   F  LL V  K G L  A ++ K MI   I      Y  L++ +C 
Sbjct: 287 KDMVSREIVP-NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
                 A  +LD +V      R + + D+   ++  +I+  C   +       FR + K+
Sbjct: 346 QNRLSEANNMLDLMV------RNKCSPDI--VTFTSLIKGYCMVKRVDDGMKVFRNISKR 397

Query: 410 G-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G V + V ++ L++G  + G    A E+ + M   GV  D   Y  L++     G+   A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
               + + +        ++ +++E + + G+V+ A  +  S+  KGVK N+     ++  
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           L  +G + EA   +  M + G+ PN   +++L+      G   A+ KL++         D
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577

Query: 586 LASYEKVLDALLAAGKTLNAYSILFK 611
            +S + V+D LL+A K L     L K
Sbjct: 578 ASSIKMVIDMLLSAMKRLTLRYCLSK 603



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/529 (20%), Positives = 228/529 (43%), Gaps = 52/529 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAK----RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           S+ + +  F+  LR G   + K      F +M+     P+   ++        + +    
Sbjct: 48  SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 107

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           + F + ++  GI+ ++ T N MIN + R  K   A  +  ++ +   EP   ++ T+IKG
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                +  +A+ + D M     +P+ VTY +++ G+                        
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI------------------------ 203

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
                       C+SG  + A D+L+ M   ++  +   Y  +I++ C+    D AI L 
Sbjct: 204 ------------CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
            ++  K I             +YN +++ LC  G+     +  + ++ + ++ + + FN 
Sbjct: 252 KEMETKGI--------KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+    KEG    A E+ K M  RG+  +   Y  L++ Y  +   ++A   LD M+ + 
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            SP    F S+++      RV    +V +++ ++G+  N    + +++     G ++ A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
                M+  G +P+   +  LL  L + GK   A+++ +        + +  Y  +++ +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
              GK  +A+++   +  KG   +  +   +I+GL ++G+  +A+IL R
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 251/549 (45%), Gaps = 50/549 (9%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+E   K+G V+E++ +   + + GV  ++  Y+AL   + +   +  A+  F++M   G
Sbjct: 338 LVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIG 397

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TY++++  F    KL+TA+ F  +M   G+   V  YN++ING+ +F  +  AE
Sbjct: 398 LCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAE 457

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L AEM  K +EPTV++YT+++ GY +  + + ALR++ EM    + P+  T+T LL GL
Sbjct: 458 SLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGL 517

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
             AG + +  K+  EM E  + P   +  + + G  C+ G+++ A + L  MI   I  +
Sbjct: 518 FRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEG-YCEEGNMSKAFEFLNEMIEKGIVPD 576

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y                              RP             +I  LC  GQ 
Sbjct: 577 TYSY------------------------------RP-------------LIHGLCLTGQA 593

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A++F   L K    L+ + +  L+ G  +EG  + A  + + MG RGV  D   Y  L
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVL 653

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+  L+  +       L  M + G  P   ++ S++++  + G  + A  +   M+ +G 
Sbjct: 654 IDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK-GKTIAAV 571
             N      ++  L   G V EA      M    SVPN   +   L +L++  G    AV
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAV 773

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           +L +  L +  + + A+Y  ++      G+   A  ++ +++  G   D  +   +I+ L
Sbjct: 774 ELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISEL 832

Query: 632 NQEGNTKQA 640
            +  + K+A
Sbjct: 833 CRRNDVKKA 841



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 230/537 (42%), Gaps = 48/537 (8%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N + + L   +N + A   F  + + GL  +D  T+  +I++  R GKL+ A   L 
Sbjct: 368 FVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDV-TYSILIDMFCRRGKLDTALSFLG 426

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G++     +  LI  + K G +  +  +   M    +E +V +Y +L      +G
Sbjct: 427 EMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKG 486

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A R +++M  +GI P+ +T+  +L G F +  +  A++ F +M    +  + VTYN
Sbjct: 487 KINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYN 546

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            MI GY     M +A +   EM EK I P   SY  +I G     +A +A    D +   
Sbjct: 547 VMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKV-------------------------------- 288
           + + N + YT LL G C  GK+ E   V                                
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVF 666

Query: 289 ---LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL-SIPTEAGHYGILI 344
              L+EM +R + P D+ ++  ++  + K+G    A  +   MI    +P E   Y  +I
Sbjct: 667 LGLLKEMHDRGLKP-DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVI 724

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN-GQTGKAEIFF 403
              CKA   + A  L  K       +RP +++  +  +Y   +  L    G   KA    
Sbjct: 725 NGLCKAGFVNEAEILCSK-------MRPGNSVPNQV-TYGCFLDILTKGVGDMKKAVELH 776

Query: 404 RQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
             ++K  + +   +N LIRG  ++G  + A E++  M   GV  D   Y  +I    R+ 
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRN 836

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           +   A    +SM E G  P    + +++      G +  A+ +   M+ +G+K N +
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTE 893



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 228/510 (44%), Gaps = 16/510 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           F++LI+ Y +   V + V +F +M  ++ +   V++  AL   +++   + +A   F+ M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           ++ GI P  + Y  ++        L  A      M++ G  +++V YN +I+G  + +K+
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            EA  +  ++  K ++P V++Y T++ G   V+  +  L + DEM      P+    ++L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GL   GK+ E   +++ + E  + P +  V+  L+   CK  + + A  +   M ++ 
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSP-NIFVYNALIDSLCKGRNFDEAELLFDRMGKIG 397

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y ILI+ FC+    D A+  L +++  ++ L+P          YN +I   C 
Sbjct: 398 LCPNDVTYSILIDMFCRRGKLDTALSFLGEMI--DMGLKPS------VYPYNSLINGHCK 449

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            G    AE    +++ K  L+P  V + +L+ G+  +G  + A  +   M  +G+     
Sbjct: 450 FGDISAAESLMAEMINKK-LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIY 508

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +  L+    R G   DA      M E    P    +  ++E   E+G +  A   +  M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEM 568

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
           +EKG+  +      ++  L + G   EA   +D + +     N   +  LL     +GK 
Sbjct: 569 IEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
             A+ +      R   +DL  Y  ++D  L
Sbjct: 629 EEALSVCQDMGLRGVDLDLVCYGVLIDGSL 658


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 212/430 (49%), Gaps = 12/430 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + L+  +    K SE  +   R VE       D  T+  ++  + R G  + A  +L  M
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGC--QPDVVTYNSIVNGICRSGDTSLALDLLRKM 219

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ V+ D   +  +I+S  + G +  ++ +F  M+  G++ SV +Y++L + + + G++
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                    M+S  I P   T+NV+L  F    KL+ A   +++M +RGIS +++TYNT+
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++GY    ++ EA  +   M      P ++++T++IKGY  V+R DD +++F  +    +
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             NAVTY+ L+ G C +GK+   +++ +EMV   + P D   +  LL   C +G L  A 
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGILLDGLCDNGKLEKAL 458

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++ + + +  +      Y  +IE  CK    + A  L   L        P   +     +
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL--------PCKGVKPNVMT 510

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  MI  LC  G   +A I  R++ + G   +   +N LIR H ++G+  ++ ++++ M 
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570

Query: 442 RRGVPRDADA 451
             G   DA +
Sbjct: 571 SCGFSADASS 580



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/517 (24%), Positives = 236/517 (45%), Gaps = 11/517 (2%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D +  ++ +   K     L F + +E  G+  H+  T   MI    R  K   
Sbjct: 83  RPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI-AHNIYTLNIMINCFCRCCKTCF 141

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +L  + K G + D   F  LI+    +G V E+V + D M + G +  V +Y+++  
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            I R G   +A     KM    ++    TY+ ++        ++ AI  F++M+++GI  
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            VVTYN+++ G  +  K ++   L  +M  + I P VI++  ++  +V   +  +A  ++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM +  + PN +TY  L+ G C   ++ E   +L  MV     P D   F  L+   C 
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP-DIVTFTSLIKGYCM 380

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              ++    V + + +  +   A  Y IL++ FC++     A +L  ++V   ++  P  
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL--P-- 436

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
               +  +Y  ++  LC NG+  KA   F  L K  + L  V +  +I G  K G  + A
Sbjct: 437 ----DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           + +   +  +GV  +   Y  +I    +KG  ++A   L  M EDG++P    + +++ +
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
              DG +  ++++++ M   G   +   +  +++ LL
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 219/514 (42%), Gaps = 48/514 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+  +   F  I R  ++ +   +  ++   GI    +T N+M+  F    K   A    
Sbjct: 87  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146

Query: 185 EDMKSRGISLDVVTYNTMI-----------------------------------NGYNRF 209
             +   G   D  T+NT+I                                   NG  R 
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
                A  L  +M+E+N++  V +Y+T+I         D A+ +F EM++  +K + VTY
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
            +L+ GLC AGK  +   +L++MV R I P +   F  LL V  K G L  A ++ K MI
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
              I      Y  L++ +C       A  +LD +V      R + + D+   ++  +I+ 
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV------RNKCSPDI--VTFTSLIKG 377

Query: 390 LCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
            C   +       FR + K+G V + V ++ L++G  + G    A E+ + M   GV  D
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  L++     G+   A    + + +        ++ +++E + + G+V+ A  +  
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
           S+  KGVK N+     ++  L  +G + EA   +  M + G+ PN   +++L+      G
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
              A+ KL++         D +S + V+D LL+ 
Sbjct: 558 DLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/529 (20%), Positives = 228/529 (43%), Gaps = 52/529 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAK----RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           S+ + +  F+  LR G   + K      F +M+     P+   ++        + +    
Sbjct: 48  SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 107

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           + F + ++  GI+ ++ T N MIN + R  K   A  +  ++ +   EP   ++ T+IKG
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                +  +A+ + D M     +P+ VTY +++ G+                        
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI------------------------ 203

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
                       C+SG  + A D+L+ M   ++  +   Y  +I++ C+    D AI L 
Sbjct: 204 ------------CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
            ++  K I             +YN +++ LC  G+     +  + ++ + ++ + + FN 
Sbjct: 252 KEMETKGI--------KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+    KEG    A E+ K M  RG+  +   Y  L++ Y  +   ++A   LD M+ + 
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            SP    F S+++      RV    +V +++ ++G+  N    + +++     G ++ A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
                M+  G +P+   +  LL  L + GK   A+++ +        + +  Y  +++ +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
              GK  +A+++   +  KG   +  +   +I+GL ++G+  +A+IL R
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 151/609 (24%), Positives = 271/609 (44%), Gaps = 27/609 (4%)

Query: 16  ALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
           AL+P+     V  V+   KN   AL+ F  V++   F H   T+  MIE LG  G+    
Sbjct: 4   ALLPKH----VAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAM 59

Query: 76  RCILLDMPKKGVQWDEDMFEVL----IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
             +L +     +  D  + E +    + +YG+KG +QE+V +F+ M     E SV+SY+A
Sbjct: 60  EEVLAETR---MNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNA 116

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           +  +++    +  A + + +M  +GI P  +T+ + +  F  + +   A R   +M S+G
Sbjct: 117 IMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQG 176

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
                V Y T+I G+       EA +LF EM    I P ++++  +I          ++ 
Sbjct: 177 CESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESE 236

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +++    V PN  T    + G C    + E  ++L + V R + P D   +  L+  
Sbjct: 237 RLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLL-DGVGRGLTP-DVITYNTLICG 294

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK+  +  A   L+ M+      +   Y  +I+ +CK  M   A ++L     K  +  
Sbjct: 295 LCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFV-- 352

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGN 429
           P      + S+Y  +I  LC +G   +A   F + M+KG L P  V  N L++G S++G 
Sbjct: 353 P------DESTYCSLINGLCQDGDIDRAINVFNEAMEKG-LKPNLVLCNTLVKGLSQQGL 405

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
              A +++  M   G   D   Y  +I    + G  +DA   +   I  GH P    F +
Sbjct: 406 ILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNT 465

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           +++   +  ++  A  ++  M   GV  ++     IL  L   G  E+ +G   LMM+ G
Sbjct: 466 LIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKG 525

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
            VPN   ++ L     +  K   A+ L++    +    D+ ++  ++      G    AY
Sbjct: 526 CVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAY 585

Query: 607 SILFKIMEK 615
            +  ++ E+
Sbjct: 586 QLFKRVDEQ 594



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/538 (23%), Positives = 252/538 (46%), Gaps = 14/538 (2%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K+I  L R G +  +  +L  + K+GV  +     + I+ + ++ ++ E++++ D + + 
Sbjct: 221 KLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR- 279

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+   V +Y+ L   + +  + + A+ Y  KM++EG EP   TYN ++ G+     ++ A
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA 339

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            +   D   +G   D  TY ++ING  +   +D A  +F E  EK ++P ++   T++KG
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                    AL++ +EM      P+  TY  ++ GLC  G + +   ++ + + +   P 
Sbjct: 400 LSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLP- 458

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  L+   CK   L+ A +++  M    +  +   Y  ++   CKA  Y+  +   
Sbjct: 459 DVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTF 518

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
             ++EK  +  P         +YN + +  C   +  +A     ++  KG+  D V F  
Sbjct: 519 KLMMEKGCV--PNII------TYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGT 570

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRR-GVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           L++G    G+ D A+++ K +  +         Y  +I ++  K     A+   + M E+
Sbjct: 571 LMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCEN 630

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G SP S  +R +++   + G + +    +   +EKG+  +L    ++L  L ++  V EA
Sbjct: 631 GFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEA 690

Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
           +G I LM+  G VP  + + ++     K +AA K++   L +   I   +YE + D +
Sbjct: 691 VGIIHLMVHKGIVP--EVVNTIFEADKKEVAAPKIVVENLMKKGHITYFAYEILHDGI 746



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 238/520 (45%), Gaps = 27/520 (5%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN---KMLSEGIEPTRHTY-NVMLWGFF 172
           +K L +  SVK  D  FK  L   + M+ K  F+   + + E +  TR    N +L G +
Sbjct: 21  LKALEIFNSVKKEDG-FKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVY 79

Query: 173 LSL--------KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           +          K++ A+  FE M        V +YN ++N    ++  D+A K++  M++
Sbjct: 80  IGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRD 139

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
           K I P V ++T  +K +    R   A R+ + M S   + +AV Y  ++ G  +    VE
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE 199

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             ++  EM+   I P D   F KL+   C+ GH+  +  +L  +++  +        I I
Sbjct: 200 AHELFEEMLGLGICP-DIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFI 258

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + FC+  M + AI+LLD +            L  +  +YN +I  LC N +  +AE + R
Sbjct: 259 QGFCQRAMLNEAIRLLDGV---------GRGLTPDVITYNTLICGLCKNFKVVEAEHYLR 309

Query: 405 QLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++ +G   D   +N++I G+ K G   +A +I++    +G   D   Y  LI    + G
Sbjct: 310 KMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDG 369

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           +   A    +  +E G  P   L  ++++ L + G +  A ++M  M E G   ++    
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYN 429

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            ++  L   G V +A   +   +  G +P+   F++L+    +K K   A++++D     
Sbjct: 430 LVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNH 489

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
               D+ +Y  +L+ L  AGK  +       +MEKG V +
Sbjct: 490 GVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPN 529



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/376 (21%), Positives = 177/376 (47%), Gaps = 9/376 (2%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T+  +I  L + G ++ A  +  +  +KG++ +  +   L++   ++G++ +++
Sbjct: 351 FVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQAL 410

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K+ + M + G    + +Y+ +   + + G    A       +++G  P   T+N ++ G+
Sbjct: 411 KLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGY 470

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
              LKL+ AI   + M + G+S DV+TYN+++NG  +  K ++    F  M EK   P +
Sbjct: 471 CKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNI 530

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I+Y  + + +    + ++AL + +EM++  + P+ V +  L+ G CD G +    ++ + 
Sbjct: 531 ITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKR 590

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           + E+Y      + +  ++       ++N A  +   M       ++  Y ++I+ FCK  
Sbjct: 591 VDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTG 650

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             +     L   +EK +I  P  T      ++  ++  LC   +  +A      ++ KG+
Sbjct: 651 NINSGYSFLLVKIEKGLI--PSLT------TFGRVLNCLCLKRRVHEAVGIIHLMVHKGI 702

Query: 412 LDPVAFNNLIRGHSKE 427
           + P   N +     KE
Sbjct: 703 V-PEVVNTIFEADKKE 717



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 81/396 (20%), Positives = 168/396 (42%), Gaps = 14/396 (3%)

Query: 250 ALRIFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           AL IF+ +K  D  K   +TY  ++  L   G+   +++VL E            V++  
Sbjct: 23  ALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGA 82

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +    + G +  A DV + M   +       Y  ++    +   +D+A K+  ++ +K I
Sbjct: 83  MRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGI 142

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           +  P      +  ++   ++  C   +   A      +  +G     VA+  +I G  +E
Sbjct: 143 V--P------DVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEE 194

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
            +   A E+ + M   G+  D  A+  LI +  RKG   +++  L+ +++ G SP     
Sbjct: 195 NHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTV 254

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
              ++   +   +  A R++   V +G+  ++     ++  L     V EA   +  M+ 
Sbjct: 255 NIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVN 313

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  P+   ++S++    + G    A ++L     +  + D ++Y  +++ L   G    
Sbjct: 314 EGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDR 373

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           A ++  + MEKG   +    + L+ GL+Q+G   QA
Sbjct: 374 AINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQA 409


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 216/439 (49%), Gaps = 12/439 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + L+  +    K SE  +   R VE       D  T+  ++  + R G  + A  +L  M
Sbjct: 152 NTLIKGLFLEGKVSEAVVLVDRMVENG--CQPDVVTYNSIVNGICRSGDTSLALDLLRKM 209

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ V+ D   +  +I+S  + G +  ++ +F  M+  G++ SV +Y++L + + + G++
Sbjct: 210 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 269

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                    M+S  I P   T+NV+L  F    KL+ A   +++M +RGIS +++TYNT+
Sbjct: 270 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 329

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++GY    ++ EA  +   M      P ++++T++IKGY  V+R DD +++F  +    +
Sbjct: 330 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 389

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             NAVTY+ L+ G C +GK+   +++ +EMV   + P D   +  LL   C +G L  A 
Sbjct: 390 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGILLDGLCDNGKLEKAL 448

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++ + + +  +      Y  +IE  CK    + A  L   L        P   +     +
Sbjct: 449 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL--------PCKGVKPNVMT 500

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  MI  LC  G   +A I  R++ + G   +   +N LIR H ++G+  ++ ++++ M 
Sbjct: 501 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 560

Query: 442 RRGVPRDADAYICLIESYL 460
             G   DA +   +I+  L
Sbjct: 561 SCGFSADASSIKMVIDMLL 579



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 238/506 (47%), Gaps = 16/506 (3%)

Query: 113 IFDIMKQL---GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
           + D  KQL   G+  ++ + + +     R  +   A     K++  G EP   T+N ++ 
Sbjct: 97  VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 156

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G FL  K+  A+   + M   G   DVVTYN+++NG  R      A  L  +M+E+N++ 
Sbjct: 157 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 216

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            V +Y+T+I         D A+ +F EM++  +K + VTY +L+ GLC AGK  +   +L
Sbjct: 217 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 276

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
           ++MV R I P +   F  LL V  K G L  A ++ K MI   I      Y  L++ +C 
Sbjct: 277 KDMVSREIVP-NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 335

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
                 A  +LD      +++R + + D+   ++  +I+  C   +       FR + K+
Sbjct: 336 QNRLSEANNMLD------LMVRNKCSPDI--VTFTSLIKGYCMVKRVDDGMKVFRNISKR 387

Query: 410 G-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G V + V ++ L++G  + G    A E+ + M   GV  D   Y  L++     G+   A
Sbjct: 388 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 447

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
               + + +        ++ +++E + + G+V+ A  +  S+  KGVK N+     ++  
Sbjct: 448 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 507

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           L  +G + EA   +  M + G+ PN   +++L+      G   A+ KL++         D
Sbjct: 508 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 567

Query: 586 LASYEKVLDALLAAGKTLNAYSILFK 611
            +S + V+D LL+A K L     L K
Sbjct: 568 ASSIKMVIDMLLSAMKRLTLRYCLSK 593



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 250/545 (45%), Gaps = 19/545 (3%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D +  ++ +   K     L F + +E  G+  H+  T   MI    R  K   
Sbjct: 73  RPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI-AHNIYTLNIMINCFCRCCKTCF 131

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +L  + K G + D   F  LI+    +G V E+V + D M + G +  V +Y+++  
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            I R G   +A     KM    ++    TY+ ++        ++ AI  F++M+++GI  
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            VVTYN+++ G  +  K ++   L  +M  + I P VI++  ++  +V   +  +A  ++
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM +  + PN +TY  L+ G C   ++ E   +L  MV     P D   F  L+   C 
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP-DIVTFTSLIKGYCM 370

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              ++    V + + +  +   A  Y IL++ FC++     A +L  ++V   ++  P  
Sbjct: 371 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL--P-- 426

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
               +  +Y  ++  LC NG+  KA   F  L K  + L  V +  +I G  K G  + A
Sbjct: 427 ----DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 482

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           + +   +  +GV  +   Y  +I    +KG  ++A   L  M EDG++P    + +++ +
Sbjct: 483 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 542

Query: 494 LFEDGRVQTASRVMKSMVEKG-------VKENLDLVAKILEALLMRGHVEE-ALGRIDLM 545
              DG +  ++++++ M   G       +K  +D++   ++ L +R  + + +  R DL+
Sbjct: 543 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLL 602

Query: 546 MQSGS 550
             SGS
Sbjct: 603 ELSGS 607



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/529 (20%), Positives = 228/529 (43%), Gaps = 52/529 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAK----RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           S+ + +  F+  LR G   + K      F +M+     P+   ++        + +    
Sbjct: 38  SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 97

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           + F + ++  GI+ ++ T N MIN + R  K   A  +  ++ +   EP   ++ T+IKG
Sbjct: 98  LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 157

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                +  +A+ + D M     +P+ VTY +++ G+                        
Sbjct: 158 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI------------------------ 193

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
                       C+SG  + A D+L+ M   ++  +   Y  +I++ C+    D AI L 
Sbjct: 194 ------------CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
            ++  K I             +YN +++ LC  G+     +  + ++ + ++ + + FN 
Sbjct: 242 KEMETKGI--------KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+    KEG    A E+ K M  RG+  +   Y  L++ Y  +   ++A   LD M+ + 
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            SP    F S+++      RV    +V +++ ++G+  N    + +++     G ++ A 
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
                M+  G +P+   +  LL  L + GK   A+++ +        + +  Y  +++ +
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
              GK  +A+++   +  KG   +  +   +I+GL ++G+  +A+IL R
Sbjct: 474 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 522



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 131/332 (39%), Gaps = 45/332 (13%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GKL  A  I  D+ K  +     M+  +IE   K G V+++  +F  +   GV+ +V +Y
Sbjct: 442 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 501

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             +   + ++G    A     KM  +G  P   TYN ++        L  + +  E+MKS
Sbjct: 502 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 561

Query: 190 RGISLDVVTYNTMIN--------------------GYNRFKKMDEAEKL------FAEMK 223
            G S D  +   +I+                          ++  +EK+      F +M 
Sbjct: 562 CGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMF 621

Query: 224 EKNIEPTVISYTTM-IKGYVAVERADD--ALR---IFDEMKSFDVKPNAVTYTALLPGLC 277
             N   T ++  T+  +G  + E   D   LR   +  + K+ DV+   VT   L  GL 
Sbjct: 622 PCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRV-LVTNELLTWGLE 680

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH---LNAAADVLKAMIRLSIP 334
           DA   + V   L         P D   +    G   + G    +  A ++ K MI+  I 
Sbjct: 681 DAECDLMVDLEL---------PTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIA 731

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
                Y  LI+ FCK    D A ++LD +V K
Sbjct: 732 PNTITYSSLIDGFCKENRLDEANQMLDLMVTK 763


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 147/592 (24%), Positives = 259/592 (43%), Gaps = 15/592 (2%)

Query: 30  LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
           L    +   AL+ F    +   F+ +   + +++  LGR G  +  R IL DM   G + 
Sbjct: 57  LRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEM 116

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
               F +LIESY +  +  E + +   M    G++     Y+ +  L++      + +  
Sbjct: 117 GTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIA 176

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
             KM   GI+P   T+NV++     + +L  AI   EDM S G+  D  T+ T++ GY  
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIE 236

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAV 267
              +D A ++  +M E     + +S   ++ G+    R +DAL    EM + D   P+  
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           T+  L+ GLC AG +    +++  M++    P D   +  ++   CK G +  A + L  
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP-DVYTYNSVISGLCKLGEVKEAVEFLDQ 355

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           MI          Y  LI   CK    + A +L   L  K I+         +  ++N +I
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL--------PDVCTFNSLI 407

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
           Q LC       A   F ++  KG   D   +N LI     +G  D A  ++K M   G  
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
           R    Y  LI+ + +  +  +A+   D M   G S  S  + ++++ L +  RV+ AS++
Sbjct: 468 RSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQL 527

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           M  M+ +G K +      +L      G +++A   +  M  +G  P+   + +L+S L +
Sbjct: 528 MDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            G+   A KLL     +   +   +Y  V+  L    KT  A ++  +++E+
Sbjct: 588 AGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 223/473 (47%), Gaps = 31/473 (6%)

Query: 3   ERAWTTRLQN-----------KIRALVPQFD---HNLVYNVL-HG---AKNSEHALQFFR 44
           E+ +TT +Q            +IR  + +F     N+  NV+ HG       E AL F +
Sbjct: 224 EKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283

Query: 45  WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKK 104
            +     F  D+ T   ++  L + G + HA  I+  M ++G   D   +  +I    K 
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
           G V+E+V+  D M       +  +Y+ L   + +  +   A      + S+GI P   T+
Sbjct: 344 GEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N ++ G  L+     A+  FE+M+S+G   D  TYN +I+      K+DEA  +  +M+ 
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
                +VI+Y T+I G+    +  +A  IFDEM+   V  N+VTY  L+ GLC + ++ +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             +++ +M+     P D   +  LL   C+ G +  AAD+++AM       +   YG LI
Sbjct: 524 ASQLMDQMIMEGQKP-DKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
              CKA   + A KLL  +  K I L P         +YNP+IQ L    +T +A   FR
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGIALTPH--------AYNPVIQGLFRKRKTTEAINLFR 634

Query: 405 QLMKK--GVLDPVAFNNLIRGHSKEGNP--DSAFEIVKIMGRRGVPRDADAYI 453
           +++++     D V++  + RG    G P  ++   +V+++ +  VP  +  Y+
Sbjct: 635 EMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYM 687



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/532 (23%), Positives = 235/532 (44%), Gaps = 48/532 (9%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I+ L R  +L  A  +L DMP  G+  DE  F  +++ Y ++G +  +++I 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIR 247

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGR----------------YMMAKRYFNK------- 151
           + M + G   S  S + +     + GR                +   +  FN        
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 152 -------------MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
                        ML EG +P  +TYN ++ G     +++ A+ F + M +R  S + VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVT 367

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YNT+I+   +  +++EA +L   +  K I P V ++ ++I+G         A+ +F+EM+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           S   +P+  TY  L+  LC  GK+ E   +L++M E     +    +  L+   CK+  +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKI 486

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A ++   M    +   +  Y  LI+  CK+   + A +L+D++     I+  Q     
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM-----IMEGQKP--- 538

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
           +  +YN ++ H C  G   KA    + +   G   D V +  LI G  K G  + A +++
Sbjct: 539 DKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH-SPASSLFRSVMESLFE 496
           + +  +G+     AY  +I+   RK +  +A      M+E    +P +  +R V   L  
Sbjct: 599 RSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCN 658

Query: 497 -DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             G ++ A   +  ++EKG       +  + E LL     E  +  ++++MQ
Sbjct: 659 GGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 710



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 149/332 (44%), Gaps = 12/332 (3%)

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           +SG  +    +L+ M           + ILIE++ + E+ D  + ++  +++ +  L+P 
Sbjct: 95  RSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMID-DFGLKPD 153

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDS 432
           +        YN M+  L         EI   ++   G+  D   FN LI+   +      
Sbjct: 154 THF------YNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  +++ M   G+  D   +  +++ Y+ +G+   A    + M+E G S ++     ++ 
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267

Query: 493 SLFEDGRVQTASRVMKSMVEK-GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
              ++GRV+ A   ++ M  + G   +      ++  L   GHV+ A+  +D+M+Q G  
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P+   ++S++S L + G+   AV+ LD  + RDC  +  +Y  ++  L    +   A  +
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              +  KG + D  + + LI GL    N + A
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 178/710 (25%), Positives = 300/710 (42%), Gaps = 78/710 (10%)

Query: 26  VYNVLHGAKNSEHALQFFRWVER----AGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           +YN++  +   E  +  F W+ +    AG+       +L +I  L   G+   AR +   
Sbjct: 118 LYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNL-LIAGLCDSGRFEDAREVFDK 176

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  KG + +E  F +L+  Y + G+   ++++ D M   GV+ +   Y+ L     R GR
Sbjct: 177 MGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGR 236

Query: 142 YMMAKRYFNKMLSEGI---------------------------------------EPTRH 162
              A+R   +M  +G+                                        P   
Sbjct: 237 NEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNIT 296

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           T+N+ML GF     LE A    E MK  G  +++ +YN  + G  R  K+ EA+    EM
Sbjct: 297 TFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEM 356

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
            +K IEP + S+ T++ G        DA  I   M S  + P+ VTY+ LL G C  GK+
Sbjct: 357 VDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKV 416

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
           ++   +L EM+ R   P   +  + LL    K G +  A  +L+ M   S   +     I
Sbjct: 417 LKANNILHEMMRRGCSPNTYTCNI-LLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNI 475

Query: 343 LIENFCKAEMYDRAIKL-----------LDKLVEKEIILRPQSTLDMEA----SSYNPMI 387
           +I+  CK+   D A+++           L  L    I L   S+   +      +Y+ +I
Sbjct: 476 VIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIII 535

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             LC  G+  +A   F +++ K +  D + ++  I    K G   SAF ++K M +RG  
Sbjct: 536 NGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCN 595

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
           +    Y  LI     K +  +    LD M E G +P    + +++  L E GR++ A+ +
Sbjct: 596 KSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSL 655

Query: 507 MKSMVEKGVKENLDLVAKILEALLMR---GHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
           +  M++KG+  N+     +++A       G V+E    I L +       +  + + L  
Sbjct: 656 LDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVF-EIALSICGHKEALYSLMFNELLI 714

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLAS--YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
            G+   A +L D  L R    DL +  Y  +++ L       NA  IL K+++KG   D 
Sbjct: 715 GGEVSEAKELFDAALDR--CFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDP 772

Query: 622 KSSDKLIAGLNQEGNTKQADILSR---------MIRGEMSRGSQKEKKQK 662
            S   +I GL + G    AD L+          M+  +++R      +QK
Sbjct: 773 ASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKITRNESAFNRQK 822


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 145/620 (23%), Positives = 272/620 (43%), Gaps = 79/620 (12%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V N L    N   AL FF+ +  +  F H   T+  MI+ LG    ++  + +L  M  +
Sbjct: 43  VLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLE 102

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G+  +ED+F ++I +Y + G+ ++++K F  + + G + SVK Y+ +   +L   ++ M 
Sbjct: 103 GISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMI 162

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT------- 198
              +N M  +GIE   +TYN++L     + +++ A +   +M  +G   D V+       
Sbjct: 163 NGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSS 222

Query: 199 -----------------------YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
                                  YN +ING+ R  KM+E  +LF EM  + I+P VI+Y+
Sbjct: 223 MCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYS 282

Query: 236 TMI-----------------------------------KGYVAVERADDALRIFDEMKSF 260
           T+I                                   KGY    R  +AL +++ M   
Sbjct: 283 TVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQE 342

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             +PN V Y  L+ GLC  GKMVE   V ++M    + P + + +  L+    K+G L  
Sbjct: 343 GSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNE-TTYSTLIDGFAKAGDLVG 401

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A+++   MI          Y  +++  C+  M++ A+ L++ +        P +T+    
Sbjct: 402 ASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNC---PPNTI---- 454

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKI 439
            ++N  I+ LC +G+T  A     Q+ + G    V  +N ++ G         A +IV  
Sbjct: 455 -TFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGE 513

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +    +  +   Y  ++  +   G    A      ++  G  P S  + +V+ +  + G 
Sbjct: 514 IEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGE 573

Query: 500 VQTASRVMKSMVEKGVK-ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           V+TA +++  + +KG    ++     +L  +     V+EA+  +D M+  G  PN   ++
Sbjct: 574 VKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWN 633

Query: 556 SLLSVLSEKGKTIAAVKLLD 575
           +L+  L  K   +  + ++D
Sbjct: 634 ALVRGLFSKLGHLGPIHIVD 653



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 189/420 (45%), Gaps = 22/420 (5%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEH----ALQFFRWVERAGLFNHDRETHLKMIEI 65
           L  +I++ VP      VYN L      EH      + F  +   G+ + D  T+  +I  
Sbjct: 235 LSMRIKSFVP------VYNALINGFCREHKMEEVFELFNEMAVEGI-DPDVITYSTVINT 287

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L  +G +  A  +L  M  +G   +   F  L++ Y   G + E++ +++ M Q G E +
Sbjct: 288 LSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPN 347

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y+ L   +   G+ + A     KM   G+ P   TY+ ++ GF  +  L  A   + 
Sbjct: 348 TVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWN 407

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M + G   +VV Y  M++   R    + A  L   M   N  P  I++ T IKG     
Sbjct: 408 KMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSG 467

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV- 304
           + + A+++ ++M+ +   PN  TY  +L GL +A +  E  +++ E+ E  I  K N V 
Sbjct: 468 KTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEI--KSNLVT 525

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  +L   C +G    A  +   ++      ++  Y  +I  +CK      AI+L+D+L 
Sbjct: 526 YNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLT 585

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
           +K      +   D+   +Y  ++  +C+     +A +   +++ +G+  +   +N L+RG
Sbjct: 586 KK-----GEGYPDV--FTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRG 638



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/513 (22%), Positives = 219/513 (42%), Gaps = 20/513 (3%)

Query: 143 MMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           ++A  +F  +  S   + T  TY  M+        ++      + MK  GIS +   +  
Sbjct: 54  LLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVI 113

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +IN Y R    ++A K F  + E   +P+V  Y  ++   ++  +      I++ MK   
Sbjct: 114 VINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDG 173

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           ++ N  TY  LL  LC   ++   +K+L EM  +   P D   +  ++   C+ G +  A
Sbjct: 174 IELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIP-DAVSYTTVVSSMCRLGKVEEA 232

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            + L   I+  +P     Y  LI  FC+    +   +L +++  + I        D +  
Sbjct: 233 RE-LSMRIKSFVPV----YNALINGFCREHKMEEVFELFNEMAVEGI--------DPDVI 279

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y+ +I  L   G    A     ++  +G    V  F +L++G+   G    A ++   M
Sbjct: 280 TYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRM 339

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            + G   +  AY  LI      G+  +A +    M  +G  P  + + ++++   + G +
Sbjct: 340 IQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDL 399

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             AS +   M+  G   N+ +   +++ L        AL  I+ M      PN   F++ 
Sbjct: 400 VGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTF 459

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  L   GKT  A+K+L+      C  ++ +Y +VLD L  A +T  A  I+ +I E   
Sbjct: 460 IKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEI 519

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRG 649
            ++  + + +++G    G  K A  I  +++ G
Sbjct: 520 KSNLVTYNTILSGFCHAGMFKGALQIAGKLLVG 552



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 5/190 (2%)

Query: 6   WTTRLQNKIR--ALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKM 62
           W  ++ N++R     P    +N V + L  AK +  ALQ    +E   +   +  T+  +
Sbjct: 471 WAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEI-KSNLVTYNTI 529

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           +      G    A  I   +   G + D   +  +I +Y K+G V+ ++++ D + + G 
Sbjct: 530 LSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGE 589

Query: 123 ERS-VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               V +Y +L   +        A  + +KM++EGI P R T+N ++ G F  L     I
Sbjct: 590 GYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPI 649

Query: 182 RFFEDMKSRG 191
              +++ + G
Sbjct: 650 HIVDNILANG 659


>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 213/459 (46%), Gaps = 40/459 (8%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F H  +T   MI  L        A  +L  M ++     ED+F  +  +YG+     ++V
Sbjct: 46  FRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAV 105

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++F  MK+   E S KSY  +F +++   +  +A R++  M   GI P+  + NV++   
Sbjct: 106 RVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKAL 165

Query: 172 FL-SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
              S  ++ A+R F +M +RG      TY T+I G  R  K+ EA++LF EM+ K   PT
Sbjct: 166 CKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPT 225

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V++Y ++I G    +  D A+R+ +EM S  +KPN  TY++L+ G C +G      ++L 
Sbjct: 226 VVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLD 285

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            MV R   P +   +  L+   CK G L  A ++L  M    +  +AG YG +I  FC  
Sbjct: 286 MMVSRRHLP-NMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDI 344

Query: 351 EMYDRAIKLLDKLVEKEIILRPQS-TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
             +  A   LD++V   I   P   T  +    +N ++Q LC                  
Sbjct: 345 CKFHEAANFLDEMVLGGI--SPNRLTWSLHVRIHNIVVQGLCTE---------------- 386

Query: 410 GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
                              +P+ AF++   M  RG+  DA  +  L+  +  KG+   A 
Sbjct: 387 -------------------HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAA 427

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
             +D M+ DG  P    + +V+ + ++  +V+ ++ +++
Sbjct: 428 HLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELVQ 466



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 179/412 (43%), Gaps = 24/412 (5%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           T++ MI+          AE+L   MKE+    T   + ++ + Y  V +  DA+R+F +M
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKM 111

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK-SG 316
           K ++ +P+  +Y  +   L    ++    +  R M E  IPP   S+ + L+   CK SG
Sbjct: 112 KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNV-LIKALCKNSG 170

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            ++AA  + + M     P  +  YG LI   C+      A +L  ++  K          
Sbjct: 171 TMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETK--------AC 222

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFE 435
                +Y  +I  LC +     A     ++  KG+   V  +++L+ GH K G    A E
Sbjct: 223 SPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALE 282

Query: 436 IVKIM-GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           ++ +M  RR +P +   Y  L+    ++G+  +A   LD M   G  P + L+  ++   
Sbjct: 283 LLDMMVSRRHLP-NMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGF 341

Query: 495 FEDGRVQTASRVMKSMVEKGVKEN---LDLVAKILEALLMRGHVEEALGR---IDLMMQS 548
            +  +   A+  +  MV  G+  N     L  +I   ++++G   E   R   + L M++
Sbjct: 342 CDICKFHEAANFLDEMVLGGISPNRLTWSLHVRI-HNIVVQGLCTEHPNRAFQLYLSMRT 400

Query: 549 GSVP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             +      FDSL++    KG    A  L+D  +   CI D  ++  V+ A 
Sbjct: 401 RGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAF 452


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 133/555 (23%), Positives = 252/555 (45%), Gaps = 43/555 (7%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D     +++ S   +G + ++  +   MK   +  +V +Y+ +    +++GR   A R  
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAV-TYNTILNWYVKKGRCKSALRIL 287

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
           + M   GIE   +TYN+M+       +   A    + M+   ++ D  +YNT+I+G+   
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
            K++ A  +F +M  ++++P+V +YT +I GY    R D+A R+  EM+   V+P+ +TY
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           +ALL G C   K+     +++ +  R I   + +++  L+   C+ G ++ A  +LK M+
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISI-NRTMYTILIDGFCQLGEVSKAKQILKCML 466

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
              I  +   Y  LI   CK  M     ++L ++ +  ++  P + L      Y  ++ +
Sbjct: 467 ADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVL--PNNVL------YTTLVFY 518

Query: 390 LCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
            C  G   +A  +F  + + G V + V  N L+    +EG    A +  + M R  +  D
Sbjct: 519 FCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFD 578

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
             ++ C+I+SY ++G   +A +  D+M+  G  P    + S++  L + G +  A   M 
Sbjct: 579 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 638

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTI 568
            ++EK    +   +  +L  +   G ++EAL   + M+    +P                
Sbjct: 639 YLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILP---------------- 682

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
                           D  +Y  +LD     GK + A  +L  ++EKG V D  +   L+
Sbjct: 683 ----------------DTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLL 726

Query: 629 AGLNQEGNTKQADIL 643
            GL  EG  K A  +
Sbjct: 727 NGLVNEGQVKAASYM 741



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 283/637 (44%), Gaps = 30/637 (4%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           F  N + N L G   SE+   F +  ++R   F  D  T   ++  L   GKL+ A  +L
Sbjct: 196 FSCNNILNALVGINKSEYVWLFLKESLDRK--FPLDVTTCNIVLNSLCTQGKLSKAESML 253

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             M K     +   +  ++  Y KKG  + +++I D M++ G+E  + +Y+ +   + + 
Sbjct: 254 QKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKL 312

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
            R   A     +M    + P   +YN ++ GFF   K+  AI  F  M  + +   V TY
Sbjct: 313 KRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATY 372

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
             +I+GY R  + DEA ++  EM+   + P+ ++Y+ ++ GY    +   AL +   ++S
Sbjct: 373 TALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRS 432

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             +  N   YT L+ G C  G++ + +++L+ M+   I P D   +  L+   CK G ++
Sbjct: 433 RSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDP-DVITYSALINGMCKMGMIH 491

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
              ++L  M +  +      Y  L+  FCKA     A+K    +         +S L   
Sbjct: 492 ETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIY--------RSGLVAN 543

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMK--KGVLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           +  +N ++      G   +AE  F+Q M   K   D  +FN +I  + + GN   AF + 
Sbjct: 544 SVIHNALLCSFYREGMIAEAEQ-FKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVY 602

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M R G P D   Y  L+    + G    AK  +  ++E   +       +++  + + 
Sbjct: 603 DNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKH 662

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G +  A  + + MV + +  +      +L+    RG V  AL  + +M++ G VP+   +
Sbjct: 663 GTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAY 722

Query: 555 DSLLSVLSEKGKTIAAVKLLD--FC---LGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
             LL+ L  +G+  AA  +     C   L  DCI    +Y  +++  L  G+ +N    L
Sbjct: 723 TCLLNGLVNEGQVKAASYMFQEIICKEGLYADCI----AYNSMMNGYLKGGQ-INEIERL 777

Query: 610 FKIMEKGGVTDWKSS-DKLIAGLNQEGNTKQADILSR 645
            + M +  V    +S + L+ G  ++G   +   L R
Sbjct: 778 MRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 814



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 134/615 (21%), Positives = 269/615 (43%), Gaps = 65/615 (10%)

Query: 85   KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            + +  +  M+ +LI+ + + G V ++ +I   M   G++  V +Y AL   + + G    
Sbjct: 433  RSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHE 492

Query: 145  AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
             K   ++M   G+ P    Y  +++ F  +   + A+++F D+   G+  + V +N ++ 
Sbjct: 493  TKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLC 552

Query: 205  GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
             + R   + EAE+    M    I   V S+  +I  Y       +A  ++D M      P
Sbjct: 553  SFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPP 612

Query: 265  NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
            +  TY +LL GLC  G +V+ ++ +  ++E+     + ++   L+G+ CK G L+ A D+
Sbjct: 613  DICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGI-CKHGTLDEALDL 671

Query: 325  LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
             + M+  +I  +   Y IL++ FCK      A+ LL  ++EK ++  P +       +Y 
Sbjct: 672  CEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV--PDTI------AYT 723

Query: 385  PMIQHLCHNGQTGKAEIFFRQLMKKGVL--DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             ++  L + GQ   A   F++++ K  L  D +A+N+++ G+ K G  +    +++ M  
Sbjct: 724  CLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHE 783

Query: 443  RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
              V   + +Y  L+  Y++KG+ +        M+++G  P +  +R ++  L E G ++ 
Sbjct: 784  NEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEI 843

Query: 503  ASRVMKSMVEKGV-KENL--DLVAK----------------------------------- 524
            A + ++ MV +GV  +NL  D++ K                                   
Sbjct: 844  AVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMK 903

Query: 525  -------------ILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTI 568
                         I+  L   G VEEA+     +M++G VP    F +L+  L ++ K  
Sbjct: 904  ALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKID 963

Query: 569  AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
             A  L          +D+ +Y  ++  L       +A  +  ++  KG + +  +   L 
Sbjct: 964  DAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLT 1023

Query: 629  AGLNQEGNTKQADIL 643
              +   G  +  + L
Sbjct: 1024 GAMYATGTMQDGEKL 1038



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/510 (21%), Positives = 224/510 (43%), Gaps = 25/510 (4%)

Query: 68   RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
            + G    A    +D+ + G+  +  +   L+ S+ ++G++ E+ +    M ++ +   V 
Sbjct: 521  KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVA 580

Query: 128  SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
            S++ +     +RG  + A   ++ M+  G  P   TY  +L G      L  A  F   +
Sbjct: 581  SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 640

Query: 188  KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
              +  ++D  T NT++ G  +   +DEA  L  +M  +NI P   +YT ++ G+    + 
Sbjct: 641  LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKV 700

Query: 248  DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
              AL +   M    + P+ + YT LL GL + G++     + +E++ +     D   +  
Sbjct: 701  VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 760

Query: 308  LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
            ++    K G +N    +++ M    +   +  Y IL+  + K     R + L   +V++ 
Sbjct: 761  MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 820

Query: 368  IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
            I  +P +       +Y  +I  LC  G    A  F  +++ +GV  D +AF+ LI+  S+
Sbjct: 821  I--KPDNV------TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSE 872

Query: 427  E----------------GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            +                G+ D AFE+ + M   GV     A   ++    + G+  +A  
Sbjct: 873  KSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAII 932

Query: 471  ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
               S++  G  P  + F ++M  L ++ ++  A  + + M   G+K ++     ++  L 
Sbjct: 933  VFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLC 992

Query: 531  MRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
             +  + +AL   + M   G +PN  + +++
Sbjct: 993  NKKCICDALDLYEEMKSKGLLPNITTYITL 1022



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 114/524 (21%), Positives = 218/524 (41%), Gaps = 46/524 (8%)

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +M S+ +   RH   + L GF  S    + +R      SR    ++ + + ++N Y +  
Sbjct: 122 QMPSQAMSVLRH---LALTGFSCSAIFSSLLRTI----SRCDPTNLFSVDLLVNAYVKEG 174

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           K+ +A      M E   + ++ S   ++   V + +++       E        +  T  
Sbjct: 175 KVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCN 234

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMI 329
            +L  LC  GK+ + + +L++M    +P   N+V +  +L    K G   +A  +L  M 
Sbjct: 235 IVLNSLCTQGKLSKAESMLQKMKNCRLP---NAVTYNTILNWYVKKGRCKSALRILDDME 291

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP----------------- 372
           +  I  +   Y I+I+  CK +   RA  LL ++  +E+ L P                 
Sbjct: 292 KNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRM--REVNLTPDECSYNTLIHGFFGEGK 349

Query: 373 ------------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
                       + +L    ++Y  +I   C NG+T +A     ++   GV    + ++ 
Sbjct: 350 INLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSA 409

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+ G+ K      A +++K +  R +  +   Y  LI+ + + GE + AK  L  M+ DG
Sbjct: 410 LLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADG 469

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    + +++  + + G +     ++  M + GV  N  L   ++      GH +EAL
Sbjct: 470 IDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEAL 529

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
                + +SG V N    ++LL     +G    A +   +        D+AS+  ++D+ 
Sbjct: 530 KYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSY 589

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              G  L A+S+   ++  G   D  +   L+ GL Q G+  QA
Sbjct: 590 CQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 633



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/346 (20%), Positives = 156/346 (45%), Gaps = 18/346 (5%)

Query: 55   DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
            D  T+  +++   + GK+  A  +L  M +KG+  D   +  L+     +G V+ +  +F
Sbjct: 683  DTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMF 742

Query: 115  -DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
             +I+ + G+     +Y+++    L+ G+    +R    M    + P+  +YN+++ G+  
Sbjct: 743  QEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIK 802

Query: 174  SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
              +L   +  + DM   GI  D VTY  +I G   +  ++ A K   +M  + + P  ++
Sbjct: 803  KGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLA 862

Query: 234  YTTMIKGYVAVERADDALRIF----------------DEMKSFDVKPNAVTYTALLPGLC 277
            +  +IK +    +  +AL++F                ++MK+  V P+ V  ++++ GLC
Sbjct: 863  FDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLC 922

Query: 278  DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
              GK+ E   V   ++   + P   + F  L+   CK   ++ A  + + M    +  + 
Sbjct: 923  KCGKVEEAIIVFSSIMRAGMVPTI-ATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDV 981

Query: 338  GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
              Y +LI   C  +    A+ L +++  K ++    + + +  + Y
Sbjct: 982  VTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMY 1027



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 16/246 (6%)

Query: 70   GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
            G+L+    +  DM K+G++ D   + +LI    + G+++ +VK  + M   GV     ++
Sbjct: 804  GQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAF 863

Query: 130  DALFKLILRRGRYMMAKRYFNKM-----------LSE-----GIEPTRHTYNVMLWGFFL 173
            D L K    + +   A + F+ M           L E     G+ P+    + ++ G   
Sbjct: 864  DILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCK 923

Query: 174  SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
              K+E AI  F  +   G+   + T+ T+++G  +  K+D+A  L   M+   ++  V++
Sbjct: 924  CGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVT 983

Query: 234  YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
            Y  +I G    +   DAL +++EMKS  + PN  TY  L   +   G M + +K+L+++ 
Sbjct: 984  YNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIE 1043

Query: 294  ERYIPP 299
            +R I P
Sbjct: 1044 DRGIVP 1049



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 21/259 (8%)

Query: 27   YNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            YN+L HG          L  +R + + G+   D  T+  +I  L   G +  A   L  M
Sbjct: 793  YNILMHGYIKKGQLSRTLYLYRDMVKEGI-KPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 851

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-------DI---------MKQLGVERSV 126
              +GV  D   F++LI+++ +K  +  ++++F       DI         MK LGV  S 
Sbjct: 852  VLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSE 911

Query: 127  KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
             +  ++ + + + G+   A   F+ ++  G+ PT  T+  ++ G     K++ A    + 
Sbjct: 912  VAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQL 971

Query: 187  MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
            M+S G+ +DVVTYN +I G    K + +A  L+ EMK K + P + +Y T+     A   
Sbjct: 972  MESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGT 1031

Query: 247  ADDALRIFDEMKSFDVKPN 265
              D  ++  +++   + P+
Sbjct: 1032 MQDGEKLLKDIEDRGIVPS 1050


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 233/472 (49%), Gaps = 14/472 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++L+ +Y +     E+++ F ++K+ G   ++++ + +  L L+  R  MA   + +M
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM 207

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
               I  + +T+N+M+       KL+ A  F   M++ G+  +VVTYNT+I+G+    K 
Sbjct: 208 FRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKF 267

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
             A  +F  MK+K +EP   +Y + I G     R ++A  +  +M    + PNAVTY AL
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNAL 327

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           + G C+ G + +      EM+ + I       ++F+  L ++   G +  A +++K M  
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFME---GRMGDADNMIKEMRE 384

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +  +A  + ILI  +C+     RA  LLD++V K I    Q TL     +Y  +I  L
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGI----QPTL----VTYTSLIYVL 436

Query: 391 CHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
               +  +A+  F ++ ++G+L D + FN LI GH   GN D AF+++K M    V  D 
Sbjct: 437 GKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDE 496

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  L++ Y R+G+  +A+  LD M   G  P    + +++    + G ++ A RV   
Sbjct: 497 ITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDE 556

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
           M+  G    +     +++ L      E A   +  M+  G  P+  + LS++
Sbjct: 557 MMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 201/420 (47%), Gaps = 16/420 (3%)

Query: 45  WVERAGLFNHDRETHLK----MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
           WV  A +F  +  + L     MI +L + GKL  A+  +  M   GV+ +   +  +I  
Sbjct: 201 WVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHG 260

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
           +  +G  Q +  IF  MK  G+E    +Y++    + + GR   A     KML  G+ P 
Sbjct: 261 HCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPN 320

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
             TYN ++ G+     L+ A  + ++M S+GI   +VTYN  I+      +M +A+ +  
Sbjct: 321 AVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIK 380

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           EM+EK + P  +++  +I GY     A  A  + DEM    ++P  VTYT+L+  L    
Sbjct: 381 EMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRN 440

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           +M E   +  ++ +  + P D  VF  L+   C +G+++ A  +LK M  + +  +   Y
Sbjct: 441 RMKEADALFSKIQQEGLLP-DIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITY 499

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             L++ +C+    + A +LLD++  + I  +P         SYN +I      G    A 
Sbjct: 500 NTLMQGYCREGKVEEARQLLDEMKRRGI--KPDHI------SYNTLISGYSKRGDMKDAF 551

Query: 401 IFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
               ++M  G  DP  + +N LI+G  K    + A E++K M  +G+  D   Y+ +IE+
Sbjct: 552 RVRDEMMTTG-FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEA 610



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 213/462 (46%), Gaps = 11/462 (2%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           K    AL+ F  ++  G F  + ET  +M+ +  ++ +   A  +  +M +  ++     
Sbjct: 160 KKPNEALECFYLIKEKG-FVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYT 218

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F ++I    K+G ++++ +    M+ LGV+ +V +Y+ +      RG++  A+  F  M 
Sbjct: 219 FNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMK 278

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G+EP  +TYN  + G     +LE A      M   G+  + VTYN +I+GY     +D
Sbjct: 279 DKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLD 338

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A     EM  K I  ++++Y   I       R  DA  +  EM+   + P+AVT+  L+
Sbjct: 339 KAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILI 398

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  G       +L EMV + I P     +  L+ V  K   +  A  +   + +  +
Sbjct: 399 NGYCRCGDAKRAFGLLDEMVGKGIQPT-LVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   +  LI+  C     DRA +LL ++   +++         +  +YN ++Q  C  
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVL--------PDEITYNTLMQGYCRE 509

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+  +A     ++ ++G+  D +++N LI G+SK G+   AF +   M   G       Y
Sbjct: 510 GKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTY 569

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
             LI+   +  E   A+  L  M+  G +P  S + S++E++
Sbjct: 570 NALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 182/403 (45%), Gaps = 39/403 (9%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           MA   +    +  IR+ +  F  N++ NVL      + A +F   +E  G+   +  T+ 
Sbjct: 199 MAWVLYAEMFRMNIRSSLYTF--NIMINVLCKEGKLKKAKEFIGHMETLGV-KPNVVTYN 255

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            +I      GK   AR I   M  KG++ D   +   I    K+G ++E+  +   M + 
Sbjct: 256 TIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG 315

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+  +  +Y+AL      +G    A  Y ++M+S+GI  +  TYN+ +   F+  ++  A
Sbjct: 316 GLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDA 375

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRF------------------------------- 209
               ++M+ +G+  D VT+N +INGY R                                
Sbjct: 376 DNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYV 435

Query: 210 ----KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
                +M EA+ LF++++++ + P +I +  +I G+ A    D A ++  EM +  V P+
Sbjct: 436 LGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPD 495

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            +TY  L+ G C  GK+ E +++L EM  R I P D+  +  L+    K G +  A  V 
Sbjct: 496 EITYNTLMQGYCREGKVEEARQLLDEMKRRGIKP-DHISYNTLISGYSKRGDMKDAFRVR 554

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
             M+          Y  LI+  CK +  + A +LL ++V K I
Sbjct: 555 DEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGI 597



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 101/458 (22%), Positives = 203/458 (44%), Gaps = 16/458 (3%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
            + ++ ++  Y   KK +EA + F  +KEK   P + +   M+  ++ + R   A  ++ 
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM   +++ +  T+  ++  LC  GK+ + ++ +  M    + P +   +  ++   C  
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKP-NVVTYNTIIHGHCLR 264

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G    A  + + M    +  +   Y   I   CK    + A  L+ K++E  ++  P   
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLV--PN-- 320

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAF 434
               A +YN +I   C+ G   KA  +  +++ KG++   V +N  I     EG    A 
Sbjct: 321 ----AVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDAD 376

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            ++K M  +G+  DA  +  LI  Y R G+   A   LD M+  G  P    + S++  L
Sbjct: 377 NMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVL 436

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            +  R++ A  +   + ++G+  ++ +   +++     G+++ A   +  M     +P+ 
Sbjct: 437 GKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDE 496

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             +++L+     +GK   A +LLD    R    D  SY  ++      G   +A+ +  +
Sbjct: 497 ITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDE 556

Query: 612 IMEKGGVTDWKSSDKLIAGL--NQEGNTKQADILSRMI 647
           +M  G      + + LI GL  NQEG   + ++L  M+
Sbjct: 557 MMTTGFDPTILTYNALIQGLCKNQEGEHAE-ELLKEMV 593



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 98/192 (51%), Gaps = 3/192 (1%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I +LG+  ++  A  +   + ++G+  D  +F  LI+ +   G +  + ++   M
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
             + V     +Y+ L +   R G+   A++  ++M   GI+P   +YN ++ G+     +
Sbjct: 488 DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDM 547

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A R  ++M + G    ++TYN +I G  + ++ + AE+L  EM  K I P   +Y ++
Sbjct: 548 KDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSI 607

Query: 238 IKGYVAVERADD 249
           I+   A+E  DD
Sbjct: 608 IE---AMETVDD 616



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/235 (20%), Positives = 97/235 (41%), Gaps = 3/235 (1%)

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           F+ L+R + +   P+ A E   ++  +G   + +    ++  +L+      A      M 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
                 +   F  ++  L ++G+++ A   +  M   GVK N+     I+    +RG  +
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
            A      M   G  P+   ++S +S L ++G+   A  L+   L    + +  +Y  ++
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           D     G    AY+   +++ KG +    + +  I  L  EG    AD + + +R
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMR 383


>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
 gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 240/508 (47%), Gaps = 12/508 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++   I SY K G++  +VK+FD M           Y+    +++R  R+ +A  Y++KM
Sbjct: 11  IYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKM 70

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
              G   +  TY+  + G   + +        +DM+      D+  +N  +N   R  + 
Sbjct: 71  APLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENRE 130

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A ++F  M E+  EP V+++T +I G   +++ D A++ +  M    ++P+     AL
Sbjct: 131 ESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVAL 190

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
             GLCD G++    +++  ++   +      V+  L+   C++G ++ A  ++  M R  
Sbjct: 191 AVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTG 250

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              +   Y +L+   C   M++ A+KLL K+          S ++ +  SYN +++  C 
Sbjct: 251 CKPDLVTYNVLLNYCCNEFMFEEAVKLLKKM--------ECSAIEPDVYSYNQLLKAHCK 302

Query: 393 NGQTGKAEIFF-RQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                KA +F   +++ KG  D V++N +I+      N   A+++ + MGR+G+  D   
Sbjct: 303 ANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVT 362

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +  LI+++LR+G    AK  LD M   G  P    + ++++   + G+V+ A  +   MV
Sbjct: 363 FTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMV 422

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           EKG+  ++     ++        V E +   + M+Q GS P+   +  ++  L  + K  
Sbjct: 423 EKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLS 482

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDAL 596
            A ++ D  + R   +D    E +++A+
Sbjct: 483 DACRVWDQMMERGLTLDRGISEMLINAI 510



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/462 (21%), Positives = 199/462 (43%), Gaps = 16/462 (3%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           D+N    VL      + A  ++  +   G F+    T+ + I  L +  +      +L D
Sbjct: 46  DYNRFIGVLIRHSRFDLAHHYYSKMAPLG-FSLSSFTYSRFISGLCQTKEFTFIDNLLKD 104

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K     D   F + +    ++   + ++++F  M + G E  V ++  +   + +  +
Sbjct: 105 MEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKK 164

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS-LDVVTYN 200
           +  A +++  ML +GI P       +  G     +++ A      + S G+S +  + YN
Sbjct: 165 FDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYN 224

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G+ R  ++D+A  + + M     +P +++Y  ++         ++A+++  +M+  
Sbjct: 225 ALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECS 284

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQCKSGHL 318
            ++P+  +Y  LL   C A       K    MV + +P    D   +  ++   C   + 
Sbjct: 285 AIEPDVYSYNQLLKAHCKAN---HPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNN 341

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A  + + M R  I  +   + ILI+ F +    D A KLLD +    ++  P      
Sbjct: 342 RRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLL--PDRIF-- 397

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
               Y  +I H C +G+   A   F  +++KG+  D V++N LI G  K         + 
Sbjct: 398 ----YTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLY 453

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           + M +RG   D   Y  +I + +R+ + +DA    D M+E G
Sbjct: 454 EQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERG 495



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 178/443 (40%), Gaps = 20/443 (4%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + Y T I  Y +   +D A K+F EM         I Y   I   +   R D A   + +
Sbjct: 10  LIYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSK 69

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M       ++ TY+  + GLC   +   +  +L++M + +  P D   F   L +  +  
Sbjct: 70  MAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVP-DIWAFNIYLNLLFREN 128

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
              +A +V   M+      +   + I+I+  CK + +D A++    +++K I  RP +  
Sbjct: 129 REESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGI--RPDN-- 184

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV--LDPVAFNNLIRGHSKEGNPDSAF 434
                +   +   LC  GQ   A      ++  G+  +  + +N LI G  + G  D A 
Sbjct: 185 ----KACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKAL 240

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +V  M R G   D   Y  L+     +    +A   L  M      P    +  ++++ 
Sbjct: 241 AMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAH 300

Query: 495 FEDGRVQTASRVMKS-MVEKGVKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSV 551
            +      A   M + MV KG     D+V+   I++A     +   A    + M + G  
Sbjct: 301 CKANHPDKAYLFMVTKMVPKGF---CDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIA 357

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P+   F  L+     +G +  A KLLD   G   + D   Y  ++D    +GK   A+SI
Sbjct: 358 PDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSI 417

Query: 609 LFKIMEKGGVTDWKSSDKLIAGL 631
              ++EKG   D  S + LI G 
Sbjct: 418 FCDMVEKGITPDVVSYNALINGF 440



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 3/284 (1%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I    R G+++ A  ++  M + G + D   + VL+     + + +E+VK+   M+   
Sbjct: 226 LISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSA 285

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYF-NKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           +E  V SY+ L K   +      A  +   KM+ +G      +YN ++  F        A
Sbjct: 286 IEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVV-SYNTIIKAFCSISNNRRA 344

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            + FE+M  +GI+ DVVT+  +I  + R    D A+KL   M    + P  I YTT+I  
Sbjct: 345 YKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDH 404

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +    + + A  IF +M    + P+ V+Y AL+ G C + ++ EV  +  +M++R   P 
Sbjct: 405 HCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFP- 463

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
           D   +  ++G   +   L+ A  V   M+   +  + G   +LI
Sbjct: 464 DEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLI 507



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 1/183 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N +        N+  A + F  + R G+   D  T   +I+   R G  + A+ +L  M
Sbjct: 328 YNTIIKAFCSISNNRRAYKLFEEMGRKGI-APDVVTFTILIKAFLREGNSDMAKKLLDLM 386

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G+  D   +  +I+ + K G V+ +  IF  M + G+   V SY+AL     +  R 
Sbjct: 387 AGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRV 446

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 + +ML  G  P   TY +++       KL  A R ++ M  RG++LD      +
Sbjct: 447 GEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEML 506

Query: 203 ING 205
           IN 
Sbjct: 507 INA 509



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 80/418 (19%), Positives = 157/418 (37%), Gaps = 43/418 (10%)

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y T I  YV     D A+++FDEM   + +   + Y   +  L    +         +M 
Sbjct: 12  YRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMA 71

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
                    + + + +   C++       ++LK M +L    +   + I +    +    
Sbjct: 72  PLGFSLSSFT-YSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENRE 130

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           + A+++  ++VE+          + +  ++  +I  LC   +   A  F+  ++ KG+  
Sbjct: 131 ESALEVFGRMVER--------GREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRP 182

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD-AYICLIESYLRKGEPADAKTA 471
           D  A   L  G    G  D A+E++  +   G+   +   Y  LI  + R G    A   
Sbjct: 183 DNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAM 242

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           +  M   G  P    +  ++     +   + A +++K M    ++ ++    ++L+A   
Sbjct: 243 VSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCK 302

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
             H ++A     L M +  VP           KG          FC       D+ SY  
Sbjct: 303 ANHPDKAY----LFMVTKMVP-----------KG----------FC-------DVVSYNT 330

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
           ++ A  +      AY +  ++  KG   D  +   LI    +EGN+  A  L  ++ G
Sbjct: 331 IIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAG 388


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 230/502 (45%), Gaps = 46/502 (9%)

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           +LI    +   V  SV +   M +LG+     +++AL   +   G+   A   FN+M+  
Sbjct: 133 ILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKR 192

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G EP   +Y  ++ G   +     A+  F+ M+  G   +VVTY+T+I+   + + +++A
Sbjct: 193 GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDA 252

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            +  +EM E+ I P V +Y +++ G+  + + ++A R+F EM   DV PN VT+T L+ G
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC  G + E + V   M E+ + P D S +  L+   C    +N A  V + MIR     
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEP-DISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAP 371

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
            A  Y ILI  +CK+   D A  LL ++  K         L+ +  +Y+ ++Q LC    
Sbjct: 372 GAHSYNILINGYCKSRRMDEAKSLLAEMYHK--------ALNPDTVTYSTLMQGLC---- 419

Query: 396 TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
                    QL                     G P  A  + K M   G   +   Y+ L
Sbjct: 420 ---------QL---------------------GRPKEALNLFKEMCSYGPHPNLVTYVIL 449

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           ++ + + G   +A   L SM E    P    +  ++E +F  G+++ A  +   +   G 
Sbjct: 450 LDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGT 509

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
           + ++     +++ LL  G  +EA      M   G +PN   ++ ++    +   +  A++
Sbjct: 510 RPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 569

Query: 573 LLDFCLGRDCIIDLASYEKVLD 594
           L+D  +G+   ++L++++ +LD
Sbjct: 570 LIDEMVGKRFSVNLSTFQMLLD 591



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 215/468 (45%), Gaps = 12/468 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R+  ++ +  +L  M K G+  D   F  LI     +G ++E+V++F+ M + G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E +V SY  +   + + G   MA   F KM   G +P   TY+ ++        +  A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            F  +M  RGI  +V TYN++++G+    +++EA +LF EM  +++ P  +++T ++ G 
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                  +A  +F+ M    V+P+  TY AL+ G C    M E +KV   M+ +   P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +S +  L+   CKS  ++ A  +L  M   ++  +   Y  L++  C+      A+ L  
Sbjct: 374 HS-YNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFK 432

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
           ++        P   L     +Y  ++   C +G   +A    +  MK+  L+P  V +  
Sbjct: 433 EMCS----YGPHPNL----VTYVILLDGFCKHGHLDEALKLLKS-MKEKKLEPNIVHYTI 483

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G    G  + A E+   +   G   D   Y  +I+  L++G   +A      M +DG
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 543

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
             P S  +  +++   ++    TA R++  MV K    NL     +L+
Sbjct: 544 FLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/496 (23%), Positives = 219/496 (44%), Gaps = 13/496 (2%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F +M+     P+   +   L  F    +  T +     M    ++ +V + N +IN   R
Sbjct: 81  FYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCR 140

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
              +D +  +  +M +  I P  I++  +I G     +  +A+ +F+EM     +PN ++
Sbjct: 141 LNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVIS 200

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           YT ++ GLC  G       V ++M +    P +   +  ++   CK   +N A + L  M
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKP-NVVTYSTIIDSLCKDRLVNDAMEFLSEM 259

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +   IP     Y  ++  FC     + A +L  ++V ++++  P +       ++  ++ 
Sbjct: 260 VERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVM--PNTV------TFTILVD 311

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G   +A + F  + +KGV  D   +N L+ G+  +   + A ++ +IM R+G   
Sbjct: 312 GLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAP 371

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
            A +Y  LI  Y +     +AK+ L  M     +P +  + ++M+ L + GR + A  + 
Sbjct: 372 GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLF 431

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           K M   G   NL     +L+     GH++EAL  +  M +    PN   +  L+  +   
Sbjct: 432 KEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIA 491

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           GK   A +L     G     D+ +Y  ++  LL  G +  AY +  K+ + G + +  S 
Sbjct: 492 GKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSY 551

Query: 625 DKLIAGLNQEGNTKQA 640
           + +I G  Q  ++  A
Sbjct: 552 NVMIQGFLQNQDSSTA 567



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 188/388 (48%), Gaps = 11/388 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           ++  +I  L + G  + A  +   M + G + +   +  +I+S  K  +V ++++    M
Sbjct: 200 SYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEM 259

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G+  +V +Y+++       G+   A R F +M+   + P   T+ +++ G      +
Sbjct: 260 VERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMV 319

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A   FE M  +G+  D+ TYN +++GY   + M+EA+K+F  M  K   P   SY  +
Sbjct: 320 SEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNIL 379

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY    R D+A  +  EM    + P+ VTY+ L+ GLC  G+  E   + +EM   Y 
Sbjct: 380 INGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCS-YG 438

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           P  +   ++ LL   CK GHL+ A  +LK+M    +     HY ILIE    A   + A 
Sbjct: 439 PHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAK 498

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
           +L  KL       RP      +  +Y  MI+ L   G + +A   FR++   G L +  +
Sbjct: 499 ELFSKLFGDGT--RP------DIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCS 550

Query: 417 FNNLIRGHSKEGNPDSAFEIV-KIMGRR 443
           +N +I+G  +  +  +A  ++ +++G+R
Sbjct: 551 YNVMIQGFLQNQDSSTAIRLIDEMVGKR 578



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 181/378 (47%), Gaps = 12/378 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +  V N L    N+  A+  F+ +E+ G    +  T+  +I+ L +   +N A   L +M
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGC-KPNVVTYSTIIDSLCKDRLVNDAMEFLSEM 259

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++G+  +   +  ++  +   G + E+ ++F  M    V  +  ++  L   + + G  
Sbjct: 260 VERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMV 319

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F  M  +G+EP   TYN ++ G+ L   +  A + FE M  +G +    +YN +
Sbjct: 320 SEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNIL 379

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           INGY + ++MDEA+ L AEM  K + P  ++Y+T+++G   + R  +AL +F EM S+  
Sbjct: 380 INGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGP 439

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAA 321
            PN VTY  LL G C  G + E  K+L+ M E+ + P  N V +  L+     +G L  A
Sbjct: 440 HPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEP--NIVHYTILIEGMFIAGKLEVA 497

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            ++   +       +   Y ++I+   K  + D A  L  K+ +   +  P S       
Sbjct: 498 KELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL--PNSC------ 549

Query: 382 SYNPMIQHLCHNGQTGKA 399
           SYN MIQ    N  +  A
Sbjct: 550 SYNVMIQGFLQNQDSSTA 567



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 208/456 (45%), Gaps = 14/456 (3%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VV +   +  + + K+      L  +M    +   V S   +I     +   D ++ +  
Sbjct: 93  VVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLG 152

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           +M    + P+A+T+ AL+ GLC+ GK+ E  ++  EMV+R   P   S +  ++   CK+
Sbjct: 153 KMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVIS-YTTVINGLCKT 211

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G+ + A DV K M +         Y  +I++ CK  + + A++ L ++VE+ I   P + 
Sbjct: 212 GNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGI---PPNV 268

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
                 +YN ++   C+ GQ  +A   F++++ + V+ + V F  L+ G  KEG    A 
Sbjct: 269 F-----TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEAR 323

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            + + M  +GV  D   Y  L++ Y  +    +AK   + MI  G +P +  +  ++   
Sbjct: 324 LVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGY 383

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF 554
            +  R+  A  ++  M  K +  +    + +++ L   G  +EAL     M   G  PN 
Sbjct: 384 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNL 443

Query: 555 DS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
            +   LL    + G    A+KLL     +    ++  Y  +++ +  AGK   A  +  K
Sbjct: 444 VTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSK 503

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           +   G   D ++   +I GL +EG + +A D+  +M
Sbjct: 504 LFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKM 539


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 150/661 (22%), Positives = 302/661 (45%), Gaps = 14/661 (2%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           AW  +L+  +R L+       V  VL    +   AL FF W  R   + HD   +  M++
Sbjct: 85  AWNAKLEGDLRRLLRSLKPRQVCAVLQLQSDERIALDFFYWAGRQWRYRHDPIVYYMMLQ 144

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           +L +      AR +L  M ++G+    + F  ++ SY + G ++ ++++  +M++ GVE 
Sbjct: 145 VLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEP 204

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           ++   +    +++   +   A R+  +M   GI P   TYN ++ G+    ++E A+   
Sbjct: 205 NLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELI 264

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVA 243
            +M  +G   D V+Y T++    + K++ E   L  +M K+  + P  ++Y T++     
Sbjct: 265 AEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSK 324

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
              AD+AL    E +    + + V Y+A++   C  G+M   ++++ EM+ +   P D  
Sbjct: 325 HGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSP-DVV 383

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  ++   CK G +  A  +L+ M +         Y  L+   C+      A ++++  
Sbjct: 384 TYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMN-- 441

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
             +E    P       A +Y+ ++  L   G+  +A    R+++ KG    PV  N LI+
Sbjct: 442 TSEEDWWTPN------AITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIK 495

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
               E   + A + ++    RG   +A  +  +I  + +      A + LD M  +   P
Sbjct: 496 SLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHP 555

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            +  F +++++L + GR++ A+     M++KG+         ++      G VEE +  +
Sbjct: 556 DAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLL 615

Query: 543 DLMM-QSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
             M+ +S     ++ ++  L   G   AA K++   L     ID  +   ++++ L+ G 
Sbjct: 616 GKMLSRSKCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGI 675

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD--ILSRMIRGEMSRGSQKEK 659
            L+AY +  ++ ++  + D K  +KL   L  EG  ++AD  +L  + RG +S  S +  
Sbjct: 676 PLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNISPDSSQHL 735

Query: 660 K 660
           K
Sbjct: 736 K 736


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 223/472 (47%), Gaps = 17/472 (3%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           LVP    +LV  V+H   +   A + F+W  +   F H+R T   ++ +  +  ++  A 
Sbjct: 67  LVP----DLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAH 122

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
                  K   + DE  +  L+  + K G V++++ +F  MK  G+   ++S++ + + +
Sbjct: 123 LFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGL 181

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
              G+  MA   F  M S    P   +Y +M+ G   S K++ AI  F+ M  + I  DV
Sbjct: 182 CSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDV 240

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VTY  +I+G  + +++ EA  LF E + K   PTV++Y TMI G     R ++AL ++D+
Sbjct: 241 VTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDD 300

Query: 257 M-KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           M +   +KP+  TY+AL+ GL  + +  +  ++  EM++    P D   +  LL   CKS
Sbjct: 301 MVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSP-DVVTYNTLLDGLCKS 359

Query: 316 GHLNAAADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           G  + A ++ + M +          Y +LI+ FCK +    A+KL  ++  + ++     
Sbjct: 360 GCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLL----- 414

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAF 434
               +A ++  +IQ LC   +  +A   F  + K    D V FN ++ G+ K    D A 
Sbjct: 415 ---PDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAK 471

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           ++   M   G       Y  L+  + R G  +DA      MIE G  P   L
Sbjct: 472 KLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHL 523


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 153/642 (23%), Positives = 293/642 (45%), Gaps = 23/642 (3%)

Query: 20  QFDHNLV-YNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           +FD ++V YNVL HG         AL+  + +   GL   D  T+  ++    RV + + 
Sbjct: 248 RFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGL-KEDVVTYCTLVLGFCRVQQFDD 306

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
             C++ +M + G    E     L++   KKG +  +  +   + + G   ++  Y+AL  
Sbjct: 307 GICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALIN 366

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + +      A+  +  M S  +     TY++++  F     L+ A  +F  M   GI  
Sbjct: 367 ALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRE 426

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            +  YN++ING+ +F  +  AE L+ +M  + +EPT  ++TT+I GY    + + A +++
Sbjct: 427 TIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLY 486

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM   ++ P+  T+TAL+ GLC   +M E  K+  EMVER I P + +  + + G  CK
Sbjct: 487 REMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEG-YCK 545

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           + +++ A ++L+ M+   +  +   Y  LI   C       A   +D L +K        
Sbjct: 546 AHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK-------- 597

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
            L +    Y+ ++   C  G+  +A     +++++G+ +D V    LI G  K+ +    
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRL 657

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           F ++K M  +G+  D+  Y  +I++Y ++G    +   LD M+ +   P    + + M  
Sbjct: 658 FGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNG 717

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS--GSV 551
           L + G +  A  + + M+   +  N       L++L   G+++EA      M++    + 
Sbjct: 718 LCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANT 777

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++ L+    + G+ I A K+L          D  +Y  ++     +G    A  +   
Sbjct: 778 ATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDT 837

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA-----DILSRMIR 648
           ++ KG   D  + + LI G    G   +A     D+LSR ++
Sbjct: 838 MLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLK 879



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 135/630 (21%), Positives = 265/630 (42%), Gaps = 38/630 (6%)

Query: 16  ALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
            L P     ++ N LH   +S+ AL+FF ++      NH   +   ++  L +      A
Sbjct: 59  TLKPHHVEQVLINTLH---DSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPA 115

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             +L  +  +G    + +FE  +ES+          K       LG +  V SY      
Sbjct: 116 NSLLHTLLLRGSD-PKFVFEKFLESH----------KQCKFSSTLGFDFLVHSY------ 158

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
            L+  R   A      ML   + P   T + +L G     K       F++  + G+  D
Sbjct: 159 -LQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPD 217

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
             T + +I      K    A++    M+    + ++++Y  +I G        +AL +  
Sbjct: 218 PYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRK 277

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
            ++   +K + VTY  L+ G C   +  +   ++ EMVE    P + +V   + G++ K 
Sbjct: 278 SLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLR-KK 336

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G++++A D++  + R         Y  LI   CK E  D+A          E++ +   +
Sbjct: 337 GNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKA----------ELLYKNMHS 386

Query: 376 LDMEAS--SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDS 432
           +++  +  +Y+ +I   C  G    AE +F ++++ G+ + +  +N+LI GH K G+  +
Sbjct: 387 MNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSA 446

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  +   M   G+   A  +  LI  Y +  +   A      M E   +P+   F +++ 
Sbjct: 447 AEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIY 506

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
            L     +  AS++   MVE+ +K        ++E      ++++A   ++ M+ +G VP
Sbjct: 507 GLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVP 566

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +   +  L+S L   G+  AA   +D    ++  ++   Y  +L      G+   A S  
Sbjct: 567 DTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSAS 626

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
            +++++G   D      LI G  ++ + K+
Sbjct: 627 CEMIQRGINMDLVCHAVLIDGAMKQQDMKR 656



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 181/444 (40%), Gaps = 57/444 (12%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  L    ++  A  +  +M ++ ++  E  + V+IE Y K   + ++ ++ + M
Sbjct: 500 TFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDM 559

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+     +Y  L   +   GR   AK + + +  + ++     Y+ +L G+    +L
Sbjct: 560 LHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRL 619

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+    +M  RGI++D+V +  +I+G  + + M     L  +M ++ + P  + YT+M
Sbjct: 620 TEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSM 679

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  Y        +    D M +    PN VTYTA + GLC  G++     +  +M+   I
Sbjct: 680 IDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANI 739

Query: 298 PPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
            P  NSV +   L    K G++  A D+   M++  +      Y ILI  FCK      A
Sbjct: 740 SP--NSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEA 796

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
            K+L ++ E  I   P      +  +Y+ +I   C +G  G A   +  +++KGV  D V
Sbjct: 797 TKVLSEMTENGIF--P------DCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSV 848

Query: 416 AFNNLI--------------------------------------------RGHSKEGNPD 431
           AFN LI                                             G    G  D
Sbjct: 849 AFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVD 908

Query: 432 SAFEIVKIMGRRGVPRDADAYICL 455
           +A  +   M  R V    + + CL
Sbjct: 909 TALRLYHSMLTRAVKLSLEMWKCL 932


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 200/427 (46%), Gaps = 11/427 (2%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D   +  LI  + K    Q++ ++ D M++ G+      Y+ + K +   GR   A  ++
Sbjct: 32  DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
             M      P+  TY +++     S ++  A    EDM   G + +VVTYNT+ING+ + 
Sbjct: 92  RDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
             MDEA  LF +M E +  P V +Y  +I GY   ER  D  ++  EM  +  +PN +TY
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 210

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
             L+  L  +GK ++   + + M+ R   P  +  F  ++ + CK G L+ A ++ + M 
Sbjct: 211 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS-HFTFNLMIDMFCKVGQLDLAYELFQLMT 269

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
                 +   Y I+I   C+A   D A +LL+++ E        +    +  +YN ++  
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE--------AGCPPDVVTYNSIVSG 321

Query: 390 LCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC   Q  +A   +  L   G  LD V  + LI G  K    D A ++++ M R G   D
Sbjct: 322 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 381

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
             AY  LI  + +  +   +      M++ G  P    +  V++ L +  RV+    ++K
Sbjct: 382 VVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 441

Query: 509 SMVEKGV 515
           +M+E+GV
Sbjct: 442 TMLERGV 448



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 208/457 (45%), Gaps = 16/457 (3%)

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N +L  F    K + A   F++      S D +TY+T+ING+ + +   +A +L  EM++
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
           + I P    Y T+IKG     R D AL  + +M+     P+ +TYT L+  LC + ++ +
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISD 120

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
              +L +M+E    P +   +  L+   CK G+++ A  +   M+  S   +   Y ILI
Sbjct: 121 ASLILEDMIEAGCAP-NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + +CK E      KLL ++V+      P         +YN ++  L  +G+   A     
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGC--EPNFI------TYNTLMDSLVKSGKYIDA-FNLA 230

Query: 405 QLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           Q+M +    P    FN +I    K G  D A+E+ ++M  RG   D   Y  +I    R 
Sbjct: 231 QMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRA 290

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
               DA+  L+ M E G  P    + S++  L +  +V  A  V + +   G   ++   
Sbjct: 291 NRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTC 350

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLG 579
           + +++ L     +++A   +  M ++GS P+   +  L+    +  +   ++      L 
Sbjct: 351 STLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLD 410

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           + C+  + +Y  V+D L  + +  +   +L  ++E+G
Sbjct: 411 KGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 187/407 (45%), Gaps = 30/407 (7%)

Query: 15  RALVPQFDHNLVYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           R +VP   HN VYN ++ G  ++   + AL  +R ++R         T+  +++ L +  
Sbjct: 62  RGIVP---HNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCA--PSVITYTILVDALCKSA 116

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           +++ A  IL DM + G   +   +  LI  + K G + E+V +F+ M +      V +Y+
Sbjct: 117 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 176

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L     ++ R     +   +M+  G EP   TYN ++     S K   A    + M  R
Sbjct: 177 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 236

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
                  T+N MI+ + +  ++D A +LF  M ++   P + +Y  MI G     R DDA
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
            ++ + M      P+ VTY +++ GLC A ++ E  +V   +       ++   F+ ++ 
Sbjct: 297 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL-------RNGGYFLDVVT 349

Query: 311 VQ------CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
                   CKS  L+ A  +L+ M R     +   Y ILI  FCKA+  D+++    +++
Sbjct: 350 CSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML 409

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
           +K  +  P         +Y+ +I  LC + +     +  + ++++GV
Sbjct: 410 DKGCV--PTVI------TYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/425 (22%), Positives = 179/425 (42%), Gaps = 11/425 (2%)

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L    +R+ +   A   F   L     P   TY+ ++ GF  +   + A R  ++M+ 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           RGI      YNT+I G     ++D A   + +M +++  P+VI+YT ++       R  D
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A  I ++M      PN VTY  L+ G C  G M E   +  +M+E    P D   +  L+
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSP-DVFTYNILI 179

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              CK       A +L+ M++         Y  L+++  K+  Y  A  L   ++ ++  
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC- 238

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
            +P         ++N MI   C  GQ   A   F+ +  +G L D   +N +I G  +  
Sbjct: 239 -KPSHF------TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 291

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             D A ++++ M   G P D   Y  ++    +  +  +A    + +   G+        
Sbjct: 292 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 351

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           ++++ L +  R+  A ++++ M   G   ++     ++        ++++L     M+  
Sbjct: 352 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 411

Query: 549 GSVPN 553
           G VP 
Sbjct: 412 GCVPT 416



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 147/323 (45%), Gaps = 11/323 (3%)

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A D+ K  +      ++  Y  LI  FCKA  + +A +LLD++ ++ I+  P + +    
Sbjct: 17  AYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIV--PHNAV---- 70

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
             YN +I+ LC NG+   A + +R + +      + +  L+    K      A  I++ M
Sbjct: 71  --YNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDM 128

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G   +   Y  LI  + + G   +A    + M+E+  SP    +  +++   +  R 
Sbjct: 129 IEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERP 188

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
           Q  +++++ MV+ G + N      ++++L+  G   +A     +M++    P+   F+ +
Sbjct: 189 QDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLM 248

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           + +  + G+   A +L      R C+ D+ +Y  ++     A +  +A  +L ++ E G 
Sbjct: 249 IDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGC 308

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA 640
             D  + + +++GL +     +A
Sbjct: 309 PPDVVTYNSIVSGLCKASQVDEA 331


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 230/494 (46%), Gaps = 47/494 (9%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P R+T+ V+L  F    KL    + FE M   GIS D + YN +I+GY +  ++DEA +L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           + EM    +EP++ +Y +++  +    +  +A+ +F  M     +P+ VTY+ ++ GLC 
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            GK+ E  ++L               F K++   C +   N  A                
Sbjct: 126 TGKVTEALEML---------------FHKMIERGCSA---NTVA---------------- 151

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI   CK E  +RA KLL+++  K  +  P +       +YN ++  LC  G+  +
Sbjct: 152 -YNALINGLCKDENIERAYKLLEEMASKGYV--PDNI------TYNTILSGLCRMGKVSE 202

Query: 399 AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A+ FF  +  +G   D VA+N L+    KEG  D A ++ K +  +G   D   Y  ++ 
Sbjct: 203 AKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILL 262

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
              RK    +A+     M+  G +P  + +  V+       +V  A +V++ M + G   
Sbjct: 263 GLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP 322

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           ++     +L+ L     V++A      M+ +G  P+   +  +L+ L +  K   A  L 
Sbjct: 323 DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLF 382

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           D  + R  + D+ ++  ++D L  AGK   A  +L ++   G   D+ + + L+ GL ++
Sbjct: 383 DRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQ 442

Query: 635 GNTKQADILSRMIR 648
           G   QAD L++ ++
Sbjct: 443 GRHIQADRLTQAMK 456



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 218/462 (47%), Gaps = 11/462 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           +R T   +++   + GKL     +   M   G+  D   + +LI+ Y KKG V E+ +++
Sbjct: 7   NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M  +G+E S+ +Y++L     +  +   A   F  M  +G EP   TY+ ++ G   +
Sbjct: 67  EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126

Query: 175 LKLETAIR-FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
            K+  A+   F  M  RG S + V YN +ING  + + ++ A KL  EM  K   P  I+
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y T++ G   + +  +A + FD M S    P+ V Y  LL  L   GK  E  K+ ++++
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
            +   P   +    LLG+  KS +++ A ++ K M+          Y I++   C+A+  
Sbjct: 247 AKGYMPDTVTYNSILLGLARKS-NMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           D A K+L+++   +I   P      +  +YN ++  LC      KA   F  ++  G   
Sbjct: 306 DDAHKVLEEM--SKIGAVP------DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D V+++ ++ G  K      A  +   M  R +  D   +  L++   + G+  +AK  L
Sbjct: 358 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 417

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           D M   G +P    + ++M  L + GR   A R+ ++M EKG
Sbjct: 418 DQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 217/452 (48%), Gaps = 16/452 (3%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           ++  + K   ++G+     + F +ML  GI P    YN+++ G+    +++ A R +E+M
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            S G+   + TYN+++N + +  KM EA +LF  M EK  EP V++Y+T+I G     + 
Sbjct: 70  VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129

Query: 248 DDALR-IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVF 305
            +AL  +F +M       N V Y AL+ GLC    +    K+L EM  + Y+P  DN  +
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP--DNITY 187

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             +L   C+ G ++ A     +M       +   Y  L++   K    D A+KL   ++ 
Sbjct: 188 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIA 247

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
           K  +  P +       +YN ++  L       +AE  F++++  G   +   ++ ++ GH
Sbjct: 248 KGYM--PDTV------TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGH 299

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            +    D A ++++ M + G   D   Y  L++   +      A     +M+++G +P  
Sbjct: 300 CRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 359

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             +  V+  L +  +V  A  +   M+E+ +  ++     +++ L   G ++EA   +D 
Sbjct: 360 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQ 419

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
           M  SG  P+   +++L++ L ++G+ I A +L
Sbjct: 420 MTCSGCAPDYVAYNTLMNGLRKQGRHIQADRL 451



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 185/393 (47%), Gaps = 11/393 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + +N + N        + A++ F+ +   G F  D  T+  +I  L + GK+  A  +L 
Sbjct: 79  YTYNSLLNAFCKETKMKEAMELFKTMAEKG-FEPDVVTYSTIISGLCKTGKVTEALEMLF 137

Query: 81  -DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             M ++G   +   +  LI    K   ++ + K+ + M   G      +Y+ +   + R 
Sbjct: 138 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRM 197

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G+   AK++F+ M S G  P    YN +L   +   K + A++ F+D+ ++G   D VTY
Sbjct: 198 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTY 257

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N+++ G  R   MDEAE++F +M      P   +Y+ ++ G+   ++ DDA ++ +EM  
Sbjct: 258 NSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSK 317

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               P+ VTY  LL GLC    + +  ++   MV+    P   S  + L G+ CK+  ++
Sbjct: 318 IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL-CKTNKVH 376

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  +   MI   +  +   + IL++  CKA   D A  LLD++          S    +
Sbjct: 377 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT--------CSGCAPD 428

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
             +YN ++  L   G+  +A+   + + +KG L
Sbjct: 429 YVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 461



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 183/393 (46%), Gaps = 15/393 (3%)

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           +  PN  T+  +L   C  GK+ +  K+  +M++  I P D   +  L+    K G ++ 
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISP-DGIEYNILIDGYAKKGRVDE 61

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  + + M+ + +      Y  L+  FCK      A++L   + EK          + + 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK--------GFEPDV 113

Query: 381 SSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
            +Y+ +I  LC  G+  +A E+ F +++++G   + VA+N LI G  K+ N + A+++++
Sbjct: 114 VTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLE 173

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  +G   D   Y  ++    R G+ ++AK   DSM   G+SP    +  ++++L+++G
Sbjct: 174 EMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG 233

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           +   A ++ K ++ KG   +      IL  L  + +++EA      M+ SG  PN   + 
Sbjct: 234 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYS 293

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            +LS      K   A K+L+       + D+ +Y  +LD L        A+ +   +++ 
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 353

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADIL-SRMI 647
           G   D  S   ++ GL +      A +L  RMI
Sbjct: 354 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 386


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 158/690 (22%), Positives = 301/690 (43%), Gaps = 68/690 (9%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           +++L+P    + V ++     +   ALQF  W+ +   F H+ +++  ++ ++     ++
Sbjct: 59  LKSLLPAITPSHVSSLFSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVS 118

Query: 74  HARCILLDMPKKGVQWDEDMF---------------------EVLIESYGKKGIVQESVK 112
               I++ M K      + +F                       L+    + G+V E  +
Sbjct: 119 DVPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQ 178

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           ++  M +  V   + +++ +  +  + G    AK++  KM+  G+ P   T    + G+ 
Sbjct: 179 LYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYC 238

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
            S  +++A R FE+M +R    + V+YN +I+G     ++DEA  LF  MK+    P V 
Sbjct: 239 RSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVY 294

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +YT +IKG +  +    A+ + DEM   ++ P+ +TY +L+ G C AG +    ++L  M
Sbjct: 295 TYTALIKG-LCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLM 353

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
            ER + P D   +   +   CKS  +  A  +  ++    +      Y +LI+ +CK   
Sbjct: 354 KERGLVP-DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            D A  L +K++ K     P       A ++N +I  LC  G   +A   F Q++K G+ 
Sbjct: 413 VDEAGCLFEKMLSKNC--SPN------AYTFNALIHGLCSAGNLKEALSLFDQMVKMGLK 464

Query: 413 DPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
             V  FN LI    K+G+ D A + ++ M   G    A  Y   IE Y   G+  +A+  
Sbjct: 465 PTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDM 524

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           +  M E+G  P    + S++++  + G   +A  V+KSM +   + +      +++ L  
Sbjct: 525 MVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFD 584

Query: 532 RGHVEEALGR--IDLMMQSGSVPN--------FDSLLSVLS--EKGKTIAAVKLLDFCLG 579
           + +V E  G   ++ +   G VP         FD ++ +    EK       K  +  + 
Sbjct: 585 KRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLIS 644

Query: 580 RDCIID----------------LASYEKVLDALLAAGKTLNAYSILFKIME----KGGVT 619
             C ++                ++  E V +A+++    L  Y     I+E     G   
Sbjct: 645 GICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSP 704

Query: 620 DWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
             +    LI GL +EG T++ + + + +RG
Sbjct: 705 QLEHCKTLICGLYEEGETERGNSVFKKLRG 734



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 235/522 (45%), Gaps = 46/522 (8%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+ L R   ++ A  +L +M ++ +  D   +  LI    + G +  + ++  +M
Sbjct: 295 TYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLM 353

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+ G+    ++Y      + +  R   A+R F+ +  EG+      Y+V++ G+    K+
Sbjct: 354 KERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKV 413

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A   FE M S+  S +  T+N +I+G      + EA  LF +M +  ++PTV ++  +
Sbjct: 414 DEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNIL 473

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I   +     DDA +   +M S   KP A TY A +   C AGK+ E + ++ +M E  +
Sbjct: 474 IGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGV 533

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           PP D+  +  L+    K G   +A DVLK+M       E  H+  L              
Sbjct: 534 PP-DDFTYTSLIKAYGKLGLTYSAFDVLKSM--FDADCEPSHHTFL-------------- 576

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF-----------FRQL 406
            L+ +L +K  ++       +E+ S         + G    + ++           F ++
Sbjct: 577 SLIKQLFDKRYVVEKSGETGVESVS---------NFGDVPGSNMWKMMEFDIVIELFEEM 627

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            K G   D   +  LI G  K  N   A +++  M + G+      +  +I    +  + 
Sbjct: 628 EKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKY 687

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA-K 524
            +A   ++ MI  GHSP     ++++  L+E+G  +  + V K +  +G   N D +A K
Sbjct: 688 GEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKL--RGCGYNDDEIAWK 745

Query: 525 IL-EALLMRGHVEEALGRIDLMMQSGSVPNFDS-LLSVLSEK 564
           IL + +L +G VEE     + M ++G   NF     S+L++K
Sbjct: 746 ILIDGMLKQGLVEEFSQLFEEMEKNGC--NFSPRTYSILTQK 785



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 203/476 (42%), Gaps = 62/476 (13%)

Query: 15  RALVPQFDHNLVYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           R LVP     + YN L      A + + A +    ++  GL   D+ T+   I+ L +  
Sbjct: 321 RNLVPDL---ITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVP-DQRTYGCFIDFLCKSN 376

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           ++  AR +   + ++GV  +  M+ VLI+ Y K G V E+  +F+ M       +  +++
Sbjct: 377 RVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFN 436

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
           AL   +   G    A   F++M+  G++PT +T+N+++         + A +  + M S 
Sbjct: 437 ALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSS 496

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G      TYN  I  Y    K+ EAE +  +MKE+ + P   +YT++IK Y  +     A
Sbjct: 497 GEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSA 556

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE------VQKV---------------- 288
             +   M   D +P+  T+ +L+  L D   +VE      V+ V                
Sbjct: 557 FDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMME 616

Query: 289 ------LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
                 L E +E++    D+  + KL+   CK  +L  A  +L  M +  I      +  
Sbjct: 617 FDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNA 676

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH-------LCHNGQ 395
           +I   CK + Y  A  +++               DM  S ++P ++H       L   G+
Sbjct: 677 VISCCCKLQKYGEAANIVE---------------DMICSGHSPQLEHCKTLICGLYEEGE 721

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV---PR 447
           T +    F++L   G   D +A+  LI G  K+G  +   ++ + M + G    PR
Sbjct: 722 TERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPR 777


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 234/513 (45%), Gaps = 50/513 (9%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           ++SE A + F  +    +F  +      MI+ L + G L  AR +L  M   G   D   
Sbjct: 177 RSSELAWRLFEQLPAPNVFTFN-----IMIDFLCKEGDLAEARALLARMKAIGCSPDVVT 231

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI+ YGK G ++E  K+   M+  G    V +Y+AL     + GR   A  YF +M 
Sbjct: 232 YNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMK 291

Query: 154 SEGI-----------------------------------EPTRHTYNVMLWGFFLSLKLE 178
            EG+                                   +P   TY  ++ G   + +L+
Sbjct: 292 REGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLD 351

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+    +M  +G+ L+VVTY  +++G  +  K+ EAE +F  M+   I    + YTT+I
Sbjct: 352 DALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLI 411

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G+   + ++ AL +  EMK   ++ +   Y AL+ GLC+  K+ E + +L +M E  + 
Sbjct: 412 HGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLK 471

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +N ++  ++    K+   + A  +L+ M+          Y  L++  CKA   D AI 
Sbjct: 472 P-NNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAIS 530

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
             +K+V  ++ L P         +Y  ++  LC NG+  KA +   +++ KG+ LD V  
Sbjct: 531 HFNKMV--DLGLEPN------VQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVC 582

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
            +L+ GH K+GN   AF +   M   G+  D   Y C +  +       +A+  L  MIE
Sbjct: 583 TSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIE 642

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           +G +P + ++  ++    + G ++ A+ +   M
Sbjct: 643 NGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 150/653 (22%), Positives = 284/653 (43%), Gaps = 74/653 (11%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           RL + ++A VP  DH L     H   +S H       + RA LF H R     ++  L  
Sbjct: 49  RLLHSLQA-VPA-DHLLS----HPLPSSAHLCLAAHILARARLFPHSR----SLLSRLLA 98

Query: 69  VGKLNHARCILLDM---------PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
            G   H    L+D+         P++       + + L+     +G++ ++V     +++
Sbjct: 99  PGHHPHLAASLVDLLHRAALALGPRRSAL--PSVVDTLLSLLADRGLLDDAVLALARVRE 156

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           L V  + ++ + +   + R     +A R F ++ +    P   T+N+M+        L  
Sbjct: 157 LRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAE 212

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A      MK+ G S DVVTYN++I+GY +  +++E EKL  EM+     P V++Y  ++ 
Sbjct: 213 ARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVN 272

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
            +    R + A   F EMK   V  N VT++  +   C  G + E  K+  +M  + + P
Sbjct: 273 CFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKP 332

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            + +                                    Y  L++  CKA   D A+ L
Sbjct: 333 NEVT------------------------------------YTCLVDGTCKAGRLDDALVL 356

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
            +++V++ + L           +Y  ++  LC  G+  +AE  FR + + G+  + + + 
Sbjct: 357 TNEMVQQGVPL--------NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYT 408

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            LI GH    N + A  ++  M  +G+  D   Y  LI       +  +AK+ L+ M E 
Sbjct: 409 TLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDEC 468

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P + ++ ++M++ F+  +   A  +++ M++ G + N+     +++ L   G ++EA
Sbjct: 469 GLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEA 528

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           +   + M+  G  PN   + +L+  L + G+   AV LLD  + +   +D      ++D 
Sbjct: 529 ISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDG 588

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            L  G   +A+++  K++  G   D       + G       ++A ++LS MI
Sbjct: 589 HLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMI 641



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 208/462 (45%), Gaps = 12/462 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F ++I+   K+G + E+  +   MK +G    V +Y++L     + G     ++   +M 
Sbjct: 197 FNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMR 256

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P   TYN ++  F    ++E A  +F +MK  G+  +VVT++T ++ + +   + 
Sbjct: 257 GCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVR 316

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA KLFA+M+ K ++P  ++YT ++ G     R DDAL + +EM    V  N VTYT L+
Sbjct: 317 EAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLV 376

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC  GK+ E + V R M ER     +  ++  L+       +   A  +L  M    +
Sbjct: 377 DGLCKEGKVAEAEDVFRLM-ERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   YG LI   C  +  D A  LL+K+   E  L+P + +          I   C  
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKM--DECGLKPNNVIYTN-------IMDACFK 486

Query: 394 GQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            +     I   Q M      P  V +  L+ G  K G+ D A      M   G+  +  A
Sbjct: 487 ARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQA 546

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  L++   + G    A   LD MI+ G S  + +  S+M+   + G +Q A  +   M+
Sbjct: 547 YTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMI 606

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             G++ +L      +        ++EA   +  M+++G  P+
Sbjct: 607 NSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPD 648



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 186/415 (44%), Gaps = 17/415 (4%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N        E A  +F  ++R G+   +  T    ++   + G +  A  +   M
Sbjct: 267 YNALVNCFCKFGRMERAYSYFAEMKREGVM-ANVVTFSTFVDAFCKNGMVREAMKLFAQM 325

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG++ +E  +  L++   K G + +++ + + M Q GV  +V +Y  L   + + G+ 
Sbjct: 326 RMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKV 385

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F  M   GI      Y  ++ G F+    E A+    +MK +G+ LDV  Y  +
Sbjct: 386 AEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGAL 445

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G    +K+DEA+ L  +M E  ++P  + YT ++       +  +A+ +  +M     
Sbjct: 446 IWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGF 505

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +PN VTY AL+ GLC AG + E      +MV+  + P +   +  L+   CK+G L+ A 
Sbjct: 506 RPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEP-NVQAYTALVDGLCKNGRLDKAV 564

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK---LLDKLVEKEIILRPQSTLDME 379
            +L  MI           G+ ++N     + D  +K   L D    K  ++   S L ++
Sbjct: 565 LLLDEMI---------DKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMI--NSGLQLD 613

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
              Y   +   C+     +A     ++++ G+  D V +N LI    K GN + A
Sbjct: 614 LYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEA 668



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 86/189 (45%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  M   G + +   +  L++   K G + E++  F+ M  LG+E +V++Y AL   + 
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLC 555

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A    ++M+ +G+         ++ G      L+ A      M + G+ LD+ 
Sbjct: 556 KNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLY 615

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            Y   + G+     + EA ++ +EM E  I P  + Y  +I     +   ++A  + +EM
Sbjct: 616 GYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675

Query: 258 KSFDVKPNA 266
           +S     NA
Sbjct: 676 ESLLSCTNA 684



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 5/205 (2%)

Query: 23  HNLVY-NVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           +N++Y N++     A+    A+   + +  +G F  +  T+  +++ L + G ++ A   
Sbjct: 473 NNVIYTNIMDACFKARKESEAIALLQKMMDSG-FRPNIVTYCALVDGLCKAGSIDEAISH 531

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
              M   G++ +   +  L++   K G + ++V + D M   G+        +L    L+
Sbjct: 532 FNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLK 591

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           +G    A     KM++ G++   + Y   +WGF     ++ A     +M   GI+ D V 
Sbjct: 592 QGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVV 651

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMK 223
           YN +IN   +   M+EA  L  EM+
Sbjct: 652 YNCLINKCQKLGNMEEAAILQNEME 676


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/609 (22%), Positives = 281/609 (46%), Gaps = 19/609 (3%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
           +A+  FR++   G+F    +T   ++  L +  +L  +  +   M ++GV  D  +F   
Sbjct: 195 NAIGVFRFLANKGVF-PTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTA 252

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           I ++ K G V++++++F  M++LGV  +V +Y+ L   + + G    A R+  KM+ +G+
Sbjct: 253 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
             T  TY+V++ G     K   A    ++   +G + + V YNT+I+GY +   + +A +
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM--KSFDVKPNAVTYTALLPG 275
           +  +M  K I P  ++  ++I+G+  + + + A  I +EM  + F + P A  +T ++  
Sbjct: 373 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA--FTTIIHW 430

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC   +     + LREM+ R + P D  +   L+G  CK G  + A ++   ++      
Sbjct: 431 LCMNSRFESALRFLREMLLRNMRPND-GLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA 489

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
                  LI   CK      A++LL K++E+  +L        +  +YN +I   C  G+
Sbjct: 490 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL--------DKITYNTLISGCCKEGK 541

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +      +++K+G+  D   +N LI G  + G  D A  +      R +  +   Y  
Sbjct: 542 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 601

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I+ Y +  +  + +     ++       S ++ +++ +   +G    A ++   M  KG
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 661

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           +       + ++  +   G +E+A   ID M + G +PN   + +L+    + G+    V
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 721

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            +L      D   +  +Y  ++D    +G    A  +L +++ KG V D  + + L  G 
Sbjct: 722 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 781

Query: 632 NQEGNTKQA 640
            +EG  ++ 
Sbjct: 782 CKEGKIEEG 790



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 173/346 (50%), Gaps = 3/346 (0%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           LV  +    K+S+    +FR +E+   F  +  T   +I  L + G +  A  +L  M +
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKG--FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 519

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +G   D+  +  LI    K+G V+E  K+   M + G+E    +Y+ L   + R G+   
Sbjct: 520 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 579

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   +N+  S  + P  +TY VM+ G+  + K+E   + F ++ ++ + L+ V YNT+I 
Sbjct: 580 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 639

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            Y R     EA KL  +M+ K I PT  +Y+++I G   + R +DA  + DEM+   + P
Sbjct: 640 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 699

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N V YTAL+ G C  G+M +V  VL+EM    I P   +  + + G   KSG +  AA +
Sbjct: 700 NVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS-KSGDMKTAAKL 758

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
           L  M+   I  +   Y +L   FCK    +   K+ D + ++ + L
Sbjct: 759 LHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPL 804



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 195/443 (44%), Gaps = 45/443 (10%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKG-----------VQW------------ 89
           N +  T   +I+   ++G++  A CIL +M  +G           + W            
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 442

Query: 90  ------------DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
                       ++ +   L+    K+G   ++V+++  + + G   ++ + +AL   + 
Sbjct: 443 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 502

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G    A R   KML  G    + TYN ++ G     K+E   +   +M  +GI  D  
Sbjct: 503 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 562

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN +I+G  R  K+DEA  L+ E K +++ P V +Y  MI GY   ++ ++  ++F E+
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            + +++ N+V Y  L+   C  G  VE  K+  +M  + IPP   + +  L+   C  G 
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT-TATYSSLIHGMCNIGR 681

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  ++  M +  +      Y  LI  +CK    D+ + +L ++   +I   P     
Sbjct: 682 MEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI--HPNKI-- 737

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
               +Y  MI     +G    A     +++ KG++ D V +N L  G  KEG  +  F+I
Sbjct: 738 ----TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793

Query: 437 VKIMGRRGVPRDADAYICLIESY 459
              M + G+P D   Y  L+  +
Sbjct: 794 CDYMSQEGLPLDEITYTTLVHGW 816



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 141/652 (21%), Positives = 284/652 (43%), Gaps = 28/652 (4%)

Query: 7   TTRLQNKIRALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           +T+ +  I  L P QFD   V+  +    N + AL FF +   +  F     ++  ++  
Sbjct: 64  STQCKQLIPHLSPHQFDS--VFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRS 121

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L   G ++ AR +L+ +       D  +  +  +   +   +  ++   + + + GV  +
Sbjct: 122 LIVSGFVSPARLLLIRL------IDRKLPVLFGDPKNRHIEIASAMADLNEVGESGV--A 173

Query: 126 VKSYDALFKLILRRGR---YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
           V + D L  +   + R   +  A   F  + ++G+ PT  T   +L     + +LE +  
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 233

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            FE M+ +G+S DV  ++T IN + +  K+++A +LF +M++  + P V++Y  +I G  
Sbjct: 234 VFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 292

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                D+A R  ++M    V    +TY+ L+ GL    K  E   VL+E +E+   P + 
Sbjct: 293 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNE- 351

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
            V+  L+   CK G+L  A  +   M+   I   +     +I+ FCK    ++A  +L++
Sbjct: 352 VVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEE 411

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLI 421
           ++ +   + P         ++  +I  LC N +   A  F R+++ + +  +      L+
Sbjct: 412 MLSRGFSINP--------GAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 463

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G  KEG    A E+   +  +G   +      LI    + G   +A   L  M+E G  
Sbjct: 464 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 523

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
                + +++    ++G+V+   ++   MV++G++ +      ++  +   G ++EA+  
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583

Query: 542 IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
            +       VPN   +  ++    +  K     KL    L ++  ++   Y  ++ A   
Sbjct: 584 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 643

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
            G T+ A+ +   +  KG      +   LI G+   G  + A  L   +R E
Sbjct: 644 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKE 695



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 78/159 (49%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  +  +G++  A+C++ +M K+G+  +   +  LI  Y K G + + V +   M
Sbjct: 668 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 727

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
               +  +  +Y  +     + G    A +  ++M+ +GI P   TYNV+  GF    K+
Sbjct: 728 SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKI 787

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           E   +  + M   G+ LD +TY T+++G+ +   +   E
Sbjct: 788 EEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALTNQE 826


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 153/688 (22%), Positives = 298/688 (43%), Gaps = 81/688 (11%)

Query: 35  NSEHALQFFRWV-ERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK--------- 84
           + + AL  FR    R  L      +H +++ IL R  + + AR +L  +P          
Sbjct: 83  DPDAALHLFRLAPSRPSLV-----SHAQLLHILARARRFHDARALLSSLPPHAEPLFPHL 137

Query: 85  ----KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
               +   +    F++L+ ++   G +  ++ +FD M ++G   S++S + L   +++ G
Sbjct: 138 AEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSG 197

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
              MA   + +M   G+ P   T  +M   +    ++  A+ F E+M+  G+ +++V Y+
Sbjct: 198 DPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYH 257

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY------------------- 241
            +++ Y      ++A ++   ++ K + P V++YT ++KGY                   
Sbjct: 258 AVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKET 317

Query: 242 --VAVE---------------RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
             + V+               R DDA R+ +EM+   +  N   Y  ++ GLC  G+M E
Sbjct: 318 GDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEE 377

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
           VQKVL+EM +  + P D   +  L+   C+ G +  A ++ + M+R  +      Y  L+
Sbjct: 378 VQKVLQEMEDVGMRP-DKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + FC     D A++L   ++++ +   P         S + ++  L   G+T +A   ++
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVA--PNEI------SCSTLLDGLFKAGKTEQALNLWK 488

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           + + +G+  + + FN +I G  K G    A E++  M     P D+  Y  L + Y + G
Sbjct: 489 ETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           +   A   ++ M   G +P+  +F S +   F   +    + +   M  +G+  NL    
Sbjct: 549 QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGK----TIAAVKLLDF 576
            ++      G++ EA      M+ +G  PN     +L+S   ++GK     +   KL++ 
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 577 CLGRDCIIDLASYEKVLDAL--LAAGKTLNA----YSILFKIMEKGGVTDWKSSDKLIAG 630
            +   C I     +K+   +  +A G   +A      I+F + + G + D KS   L   
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKS---LFES 725

Query: 631 LNQEGNTKQADILSRMIRGEMSRGSQKE 658
           L  +         S +I G  + GS  E
Sbjct: 726 LRNKRFLPDNFTYSSLIHGCAASGSIDE 753



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/519 (23%), Positives = 245/519 (47%), Gaps = 39/519 (7%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI  L ++G++   + +L +M   G++ D+  +  LI+ Y ++G ++++ ++  +M + G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +  +Y+ L K          A R +  ML  G+ P   + + +L G F + K E A+
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             +++  +RG++ +V+T+NT+ING  +  +M EAE+L   MKE    P  ++Y T+  GY
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             + +   A  + ++M+     P+   + + + G   A +  +V  +  EM  R + P +
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSP-N 603

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK G+L+ A ++   M+   +         L+  F K    D A  +L 
Sbjct: 604 LVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663

Query: 362 KLVEKEIILRPQ-STLDMEASS-----------------YNPMIQHLCHNGQTGKAEIFF 403
           KLV  ++I     ST++++  S                 +N +I  LC +G+   A+  F
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLF 723

Query: 404 RQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
             L  K  L D   +++LI G +  G+ D AF +  +M   G+  +   Y  LI    + 
Sbjct: 724 ESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS 783

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G+ + A    + +   G SP    + ++++   ++G+   A ++ + MVE+G        
Sbjct: 784 GKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG-------- 835

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
                      ++EEA+  +D M+++   PN+ +  +++
Sbjct: 836 -----------YMEEAIKLLDQMIENNVDPNYITYCTLI 863



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 145/633 (22%), Positives = 265/633 (41%), Gaps = 74/633 (11%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
            A++F   +E  GL  +    H  M    G +G    AR IL  + +KG+  +   + +L
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCG-MGWTEDARRILESLQRKGLSPNVVTYTLL 294

Query: 98  IESYGKKGIVQESVKIFDIMKQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++ Y K G ++E+ ++   MK+ G +     +Y  +     +RGR   A R  N+M   G
Sbjct: 295 VKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAG 354

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I      YN M+ G     ++E   +  ++M+  G+  D  +YNT+I+GY R   M +A 
Sbjct: 355 IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAF 414

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           ++   M    +  T ++Y T++KG+ ++   DDALR++  M    V PN ++ + LL GL
Sbjct: 415 EMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGL 474

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
             AGK  +   + +E + R +  K+   F  ++   CK G +  A ++L  M  L  P +
Sbjct: 475 FKAGKTEQALNLWKETLARGLA-KNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
           +  Y  L + +CK      A  L++K               ME   + P ++        
Sbjct: 534 SLTYRTLFDGYCKLGQLGTATHLMNK---------------MEHLGFAPSVE-------- 570

Query: 397 GKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
                               FN+ I GH          +I   M  RG+  +   Y  LI
Sbjct: 571 -------------------MFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE---- 512
             + ++G   +A      M+ +G +P   +  ++M   +++G+V  A+ V++ +V     
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMI 671

Query: 513 ----------KGVKENLDLVAK------------ILEALLMRGHVEEALGRIDLMMQSGS 550
                       +   +D +A             I+  L   G + +A    + +     
Sbjct: 672 PGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731

Query: 551 VPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
           +P+   + SL+   +  G    A  L D  L      ++ +Y  ++  L  +GK   A +
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791

Query: 608 ILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +  K+  KG   +  + + LI    +EG T +A
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA 824



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 19/209 (9%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           M+ V+I    K G + ++  +F+ ++         +Y +L       G    A    + M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS G+ P   TYN +++G   S KL  A+  F  ++S+GIS + +TYNT+I+ Y +  K 
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKT 821

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            EA KL    K+K +E          +GY+     ++A+++ D+M   +V PN +TY  L
Sbjct: 822 TEAFKL----KQKMVE----------EGYM-----EEAIKLLDQMIENNVDPNYITYCTL 862

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           + G   +G M E+ K+  EM  R + P +
Sbjct: 863 IHGYIKSGNMEEISKLYDEMHIRGLLPTN 891



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 16/181 (8%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L + G++  A+ +   +  K    D   +  LI      G + E+  + D+M   G+  +
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML----------WGFFLSL 175
           + +Y++L   + + G+   A   FNK+ S+GI P   TYN ++            F L  
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829

Query: 176 KL------ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           K+      E AI+  + M    +  + +TY T+I+GY +   M+E  KL+ EM  + + P
Sbjct: 830 KMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889

Query: 230 T 230
           T
Sbjct: 890 T 890


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 261/565 (46%), Gaps = 55/565 (9%)

Query: 14  IRALVPQFDHNLVY-NVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           I+ L P    +L+   +L   K S+ ALQF   +   GL   D +T    + ++ R    
Sbjct: 73  IKHLAPNLSPSLISATLLSLHKKSDLALQFVTHIGFKGL---DIKTKCLAVAVVSRSPSP 129

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLI---ESYGKKGIV---------------QESVKIF 114
                +L    +  V   +D+F  L    +  G K  +                ++ + F
Sbjct: 130 KSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECF 189

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D+MK+ GV   +++++A+  L L+  +       + +M    I+ T +T+N+M+      
Sbjct: 190 DMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKE 249

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL+ A  F   M++ G+  +VVTYNT+I+GY    +++ A  +   MK + +EP   +Y
Sbjct: 250 GKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTY 309

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            ++I G     + ++A  I ++MK   + P AVTY  L+ G C+ G +V+      EMV 
Sbjct: 310 GSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVR 369

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R I P   S +  L+      G ++ A  ++K M    I  ++  Y ILI  +C+     
Sbjct: 370 RAILPT-VSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAK 428

Query: 355 RAIKLLDKLVEKEI-----------------------------ILRPQSTLDMEASSYNP 385
           +A  L D+++ K I                             I+R  ++ D+    +N 
Sbjct: 429 KAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIM--FNA 486

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I   C NG   +A    +++ K+ ++ D V +N L++G  +EG  + A E++K M RRG
Sbjct: 487 LIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG 546

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +  D  +Y  LI  Y ++G+  DA T  D M+  G +P    + ++++ L ++ +   A 
Sbjct: 547 IRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAE 606

Query: 505 RVMKSMVEKGVKENLDLVAKILEAL 529
            ++K MV KG+  +      ++E +
Sbjct: 607 ELLKEMVSKGITPDDSTYFSLIEGI 631



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 207/420 (49%), Gaps = 23/420 (5%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           KI++ V  F  N++ NVL      + A  F   +E  G+   +  T+  +I      G++
Sbjct: 231 KIKSTVYTF--NIMINVLCKEGKLKKAKDFIGSMENLGV-KPNVVTYNTVIHGYCSRGRV 287

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
             AR +L  M  +GV+ D   +  LI    K G ++E+  I + MK++G+  +  +Y+ L
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
                 +G  + A  Y ++M+   I PT  TYN+++   FL  K++ A    +DM   GI
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGI 407

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER-----A 247
             D +TYN +INGY R     +A  L  EM  K I+PT+++YT++I  YV  +R     A
Sbjct: 408 VPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLI--YVLSKRNRMKAA 465

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           DD   +F+++      P+ + + AL+ G C  G +     +L+EM +R I P D   +  
Sbjct: 466 DD---LFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVP-DEVTYNT 521

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+  +C+ G +  A ++LK M R  I  +   Y  LI  + K    + A  + D+++   
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEML--S 579

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
           I   P         +YN +IQ LC N Q   AE   ++++ KG+  D   + +LI G  K
Sbjct: 580 IGFNPT------LLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 194/415 (46%), Gaps = 15/415 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI +L + GKL  A+  +  M   GV+ +   +  +I  Y  +G V+ +  + DIMK  G
Sbjct: 242 MINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRG 301

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           VE    +Y +L   + + G+   A     KM   G+ PT  TYN ++ G+     L  A 
Sbjct: 302 VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAF 361

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            + ++M  R I   V TYN +I+      KMDEA+ +  +M +  I P  I+Y  +I GY
Sbjct: 362 GYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGY 421

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                A  A  + DEM S  ++P  VTYT+L+  L    +M     +  +++     P D
Sbjct: 422 CRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASP-D 480

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             +F  L+   C +G+L+ A  +LK M + +I  +   Y  L++  C+    + A +LL 
Sbjct: 481 LIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLK 540

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
           ++  + I  RP         SYN +I      G    A     +++  G  +P  + +N 
Sbjct: 541 EMKRRGI--RPDHI------SYNTLISGYSKRGDINDAFTIRDEMLSIG-FNPTLLTYNA 591

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           LI+G  K    D A E++K M  +G+  D   Y  LIE     G+  D+  A DS
Sbjct: 592 LIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI---GKVDDSSEASDS 643



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 210/462 (45%), Gaps = 16/462 (3%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + ++ +I      K+ D+A + F  MKEK + P + ++  M+  ++ + + +    ++ E
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    +K    T+  ++  LC  GK+ + +  +  M    + P +   +  ++   C  G
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKP-NVVTYNTVIHGYCSRG 285

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            +  A  VL  M    +  ++  YG LI   CK    + A  +L+K+  KEI L P    
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM--KEIGLLPT--- 340

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFE 435
              A +YN +I   C+ G   KA  +  +++++ +L  V+ +N LI     EG  D A  
Sbjct: 341 ---AVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADG 397

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           ++K MG  G+  D+  Y  LI  Y R G    A    D MI  G  P    + S++  L 
Sbjct: 398 MIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLS 457

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           +  R++ A  + + ++ +G   +L +   +++     G+++ A   +  M +   VP+  
Sbjct: 458 KRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEV 517

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            +++L+     +GK   A +LL     R    D  SY  ++      G   +A++I  ++
Sbjct: 518 TYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           +  G      + + LI GL +    +Q D+   +++  +S+G
Sbjct: 578 LSIGFNPTLLTYNALIQGLCK---NQQGDLAEELLKEMVSKG 616


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 239/517 (46%), Gaps = 15/517 (2%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERA-GLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           +V  V++  K+++ AL FFRW   +   F+H   +   ++++L R  K   A  +     
Sbjct: 45  IVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSEL 104

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
               + D   + ++I  +   G +  ++++ + MK  G      ++  +   +   G   
Sbjct: 105 LASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD 164

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A  +   M   G +P   TY  ++  F  + KLE A++  E+M+ RG   ++VTYN ++
Sbjct: 165 GAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLV 221

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +   +   +  A+ +  +M E    P V+++ +++ G+      DDA ++   M +  ++
Sbjct: 222 DALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR 281

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           PN VTY+AL+ GLC + K +E ++VL EM  R + P D   +  L+   CK+  +  A  
Sbjct: 282 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTP-DAFTYSALIHGLCKADKIEEAEQ 340

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +L+ M       +   Y  +I  FCK+     A K L +       +R Q     +  +Y
Sbjct: 341 MLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE-------MRKQRK-SPDVVTY 392

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           N +I  LC  G+  +A++   Q+ + G + P  V ++ +I G  K      A +++  M 
Sbjct: 393 NTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMC 452

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           + G   D   Y  +I+   + G   +A+  L  M   G +P    + +++  L +  +V 
Sbjct: 453 KAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVD 512

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            A RVM+ M   G   NL     ++  L + G ++EA
Sbjct: 513 EAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEA 549



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 223/495 (45%), Gaps = 54/495 (10%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F H  +   +  A + + A+   R +      + +  T+  +I    R  KL  A  +L 
Sbjct: 148 FTHTPIITAMANAGDLDGAMDHLRSMG----CDPNVVTYTALIAAFARAKKLEEAMKLLE 203

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M ++G   +   + VL+++  K  +V  +  +   M + G   +V ++++L     +RG
Sbjct: 204 EMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRG 263

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A++    M+++G+ P   TY+ ++ G   S K   A    E+MK+RG++ D  TY+
Sbjct: 264 NVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYS 323

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G  +  K++EAE++   M      P V+ Y+++I  +    +  +A +   EM+  
Sbjct: 324 ALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ 383

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+ VTY  ++ GLC  GK+ E Q +L +M E                          
Sbjct: 384 RKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQE-------------------------- 417

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           + DVL  ++          Y  +I   CK++M   A KLLD++         ++  + + 
Sbjct: 418 SGDVLPDVVT---------YSTVINGLCKSDMLVEAQKLLDRMC--------KAGCNPDV 460

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVK 438
            +Y  +I  LC  G+  +AE +  Q MK+    P  V +  LI G  K    D A  +++
Sbjct: 461 VTYTTIIDGLCKCGRLEEAE-YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 519

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH---SPASSLFRSVMESLF 495
            M   G P +   Y  ++      G   +A+  +  M +DG    SP ++ +R+++ +L 
Sbjct: 520 EMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM-KDGRAECSPDAATYRTIVNALM 578

Query: 496 EDGRVQTASRVMKSM 510
               VQ A ++++ M
Sbjct: 579 SSDLVQEAEQLLEQM 593



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 207/487 (42%), Gaps = 44/487 (9%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G   T  ++N +L       K   A   F          DV +YN +I+G+     +  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            +L  EMK     P   ++T +I    A+  A D     D ++S    PN VTYTAL+  
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPII---TAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAA 188

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
              A K+ E  K+L EM ER  PP +   +  L+   CK   + AA DV+K MI      
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPP-NLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 247

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               +  L++ FCK    D A KLL  +V K   +RP         +Y+ +I  LC + +
Sbjct: 248 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG--MRPNVV------TYSALIDGLCKSQK 299

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A+    ++  +GV  D   ++ LI G  K    + A ++++ M   G   D   Y  
Sbjct: 300 FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I ++ + G+  +A+  L  M +   SP    + +V++ L + G++  A  +++ M E G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
                D++  ++                           + ++++ L +    + A KLL
Sbjct: 420 -----DVLPDVV--------------------------TYSTVINGLCKSDMLVEAQKLL 448

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           D      C  D+ +Y  ++D L   G+   A  +L  +   G   +  +   LI+GL + 
Sbjct: 449 DRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKA 508

Query: 635 GNTKQAD 641
               +A+
Sbjct: 509 RKVDEAE 515



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/419 (22%), Positives = 197/419 (47%), Gaps = 17/419 (4%)

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
           T  S+ ++++  V  ++  +A  +F        +P+  +Y  ++ G C+AG +    ++L
Sbjct: 76  TAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELL 135

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            EM      P D      ++     +G L+ A D L++M           Y  LI  F +
Sbjct: 136 EEMKSAGFAP-DAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFAR 191

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
           A+  + A+KLL+++ E+     P + +     +YN ++  LC     G A+   +++++ 
Sbjct: 192 AKKLEEAMKLLEEMRERGC---PPNLV-----TYNVLVDALCKLSMVGAAQDVVKKMIEG 243

Query: 410 GVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G    V  FN+L+ G  K GN D A +++ IM  +G+  +   Y  LI+   +  +  +A
Sbjct: 244 GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 303

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           K  L+ M   G +P +  + +++  L +  +++ A ++++ M   G   ++ + + I+ A
Sbjct: 304 KEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHA 363

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD-FCLGRDCII 584
               G + EA   +  M +    P+   +++++  L + GK   A  +L+      D + 
Sbjct: 364 FCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLP 423

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           D+ +Y  V++ L  +   + A  +L ++ + G   D  +   +I GL + G  ++A+ L
Sbjct: 424 DVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 482



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 3/208 (1%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKG-VQWDEDMFEVLIESYGKKGIVQESVKI 113
           D  T+  +I+ L ++GK+  A+ IL  M + G V  D   +  +I    K  ++ E+ K+
Sbjct: 388 DVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 447

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
            D M + G    V +Y  +   + + GR   A+     M   G  P   TY  ++ G   
Sbjct: 448 LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 507

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE--PTV 231
           + K++ A R  E+M++ G   ++VTYNTM+NG     ++ EA++L   MK+   E  P  
Sbjct: 508 ARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDA 567

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKS 259
            +Y T++   ++ +   +A ++ ++MKS
Sbjct: 568 ATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 127/274 (46%), Gaps = 7/274 (2%)

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFR-QLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
           A S+N ++Q L    +  +A   FR +L+     D  ++N +I G    G+  +A E+++
Sbjct: 77  AFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLE 136

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G   DA  +  +I +    G   D   A+D +   G  P    + +++ +     
Sbjct: 137 EMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSMGCDPNVVTYTALIAAFARAK 193

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           +++ A ++++ M E+G   NL     +++AL     V  A   +  M++ G  PN   F+
Sbjct: 194 KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 253

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           SL+    ++G    A KLL   + +    ++ +Y  ++D L  + K L A  +L ++  +
Sbjct: 254 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTR 313

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
           G   D  +   LI GL +    ++A+ + R + G
Sbjct: 314 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 347


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 153/688 (22%), Positives = 298/688 (43%), Gaps = 81/688 (11%)

Query: 35  NSEHALQFFRWV-ERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK--------- 84
           + + AL  FR    R  L      +H +++ IL R  + + AR +L  +P          
Sbjct: 83  DPDAALHLFRLAPSRPSLV-----SHAQLLHILARARRFHDARALLSSLPPHAEPLFPHL 137

Query: 85  ----KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
               +   +    F++L+ ++   G +  ++ +FD M ++G   S++S + L   +++ G
Sbjct: 138 AEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSG 197

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
              MA   + +M   G+ P   T  +M   +    ++  A+ F E+M+  G+ +++V Y+
Sbjct: 198 DPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYH 257

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY------------------- 241
            +++ Y      ++A ++   ++ K + P V++YT ++KGY                   
Sbjct: 258 AVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKET 317

Query: 242 --VAVE---------------RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
             + V+               R DDA R+ +EM+   +  N   Y  ++ GLC  G+M E
Sbjct: 318 GDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEE 377

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
           VQKVL+EM +  + P D   +  L+   C+ G +  A ++ + M+R  +      Y  L+
Sbjct: 378 VQKVLQEMEDVGMRP-DKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + FC     D A++L   ++++ +   P         S + ++  L   G+T +A   ++
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVA--PNEI------SCSTLLDGLFKAGKTEQALNLWK 488

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           + + +G+  + + FN +I G  K G    A E++  M     P D+  Y  L + Y + G
Sbjct: 489 ETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           +   A   ++ M   G +P+  +F S +   F   +    + +   M  +G+  NL    
Sbjct: 549 QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGK----TIAAVKLLDF 576
            ++      G++ EA      M+ +G  PN     +L+S   ++GK     +   KL++ 
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 577 CLGRDCIIDLASYEKVLDAL--LAAGKTLNA----YSILFKIMEKGGVTDWKSSDKLIAG 630
            +   C I     +K+   +  +A G   +A      I+F + + G + D KS   L   
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKS---LFES 725

Query: 631 LNQEGNTKQADILSRMIRGEMSRGSQKE 658
           L  +         S +I G  + GS  E
Sbjct: 726 LRNKRFLPDNFTYSSLIHGCAASGSIDE 753



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/519 (23%), Positives = 254/519 (48%), Gaps = 20/519 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI  L ++G++   + +L +M   G++ D+  +  LI+ Y ++G ++++ ++  +M + G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +  +Y+ L K          A R +  ML  G+ P   + + +L G F + K E A+
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             +++  +RG++ +V+T+NT+ING  +  +M EAE+L   MKE    P  ++Y T+  GY
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             + +   A  + ++M+     P+   + + + G   A +  +V  +  EM  R + P +
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSP-N 603

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK G+L+ A ++   M+   +         L+  F K    D A  +L 
Sbjct: 604 LVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663

Query: 362 KLVEKEIILRPQ-STLDMEASS-----------------YNPMIQHLCHNGQTGKAEIFF 403
           KLV  ++I     ST++++  S                 +N +I  LC +G+   A+  F
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLF 723

Query: 404 RQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
             L  K  L D   +++LI G +  G+ D AF +  +M   G+  +   Y  LI    + 
Sbjct: 724 ESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS 783

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G+ + A    + +   G SP    + ++++   ++G+   A ++ + MVE+G++  +   
Sbjct: 784 GKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITY 843

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
           + ++  L  +G++EEA+  +D M+++   PN+ +  +++
Sbjct: 844 SILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 206/493 (41%), Gaps = 45/493 (9%)

Query: 25  LVYNVLHGAKNSEHALQ-----FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           L YN L     S HA+      +F  ++R    N    + L  ++ L + GK   A  + 
Sbjct: 430 LTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTL--LDGLFKAGKTEQALNLW 487

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +   +G+  +   F  +I    K G + E+ ++ D MK+L       +Y  LF    + 
Sbjct: 488 KETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKL 547

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G+   A    NKM   G  P+   +N  + G F++ +         +M +RG+S ++VTY
Sbjct: 548 GQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTY 607

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
             +I G+ +   + EA  L+ EM    + P V   + ++  +    + D+A  +  ++ +
Sbjct: 608 GALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVN 667

Query: 260 FDVKPNA--------------------------VTYTALLPGLCDAGKMVEVQKVLREMV 293
            D+ P                            V +  ++ GLC +G++ + + +   + 
Sbjct: 668 IDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLR 727

Query: 294 -ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
            +R++P  DN  +  L+     SG ++ A  +   M+   +      Y  LI   CK+  
Sbjct: 728 NKRFLP--DNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGK 785

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
             RA+ L +KL  K I   P         +YN +I   C  G+T +A    ++++++G+ 
Sbjct: 786 LSRAVNLFNKLQSKGI--SPNGI------TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQ 837

Query: 413 DPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
             V  ++ LI G   +G  + A +++  M    V  +   Y  LI  Y++ G   +    
Sbjct: 838 PTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 897

Query: 472 LDSMIEDGHSPAS 484
            D M   G  P +
Sbjct: 898 YDEMHIRGLLPTN 910


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 145/567 (25%), Positives = 252/567 (44%), Gaps = 19/567 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M ++ V  D   + +LI+   K G + ++  +F  +   GV  S  +Y +L   +     
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A+  F  M   G  P+  TYNVM+        LE A    + M   G   DVVTYNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G  +  +++EA  LF EM+     P   S+ T+I G     + D A ++F EM++ D
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P++ +Y  L+ GL  AGK+ E  K+ + M++  I P   +  + + G+ C +  L+ A
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM-CLAYTLDEA 239

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            ++ K+M           + ILI+  CK    D A +LL ++ +   +         +  
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV--------PDVV 291

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-NNLIRGHSKEGNPDSAFEIVKIM 440
           +Y+ +I  LC   +   A      ++K+     V   N LI G  K G    A E++  M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G   D   Y  L+  + R G+   A+  L  M+  G +P    + +++  L +  R+
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A  V   M   G   NL     ++      G V+  L     M+ +G  P+   + +L
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLA----SYEKVLDALLAAGKTLNAYSILFKIM 613
            + L + G++  A+++L    GR+ +   A     Y   +D LL AGK   A   +  ++
Sbjct: 472 AAELCKSGRSARALEILRE--GRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMV 529

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             G +   +    L+AGL + G   +A
Sbjct: 530 RGGQLPAPERCASLVAGLCKSGQGGEA 556



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 236/525 (44%), Gaps = 17/525 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            +  +I  L      + AR +  DM ++G       + V+I++  K+G+++E+  +   M
Sbjct: 47  AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 106

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G    V +Y+ +   + +  R   A   FN+M   G  P R ++N ++ G     K+
Sbjct: 107 IEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKI 166

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A + F +M+++ I  D  +Y  +I+G  +  K++EA KLF  M +  I P+ ++Y  +
Sbjct: 167 DQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVV 226

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-Y 296
           I G       D+AL +F  M+S   +P+  T+  L+   C  GK+ E  ++L+ M +  +
Sbjct: 227 IHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGH 286

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +P  D   +  L+   C    ++ A  +L+ M++            LI   CKA     A
Sbjct: 287 VP--DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
            ++LD +V         S    +  +YN ++   C  GQT +A      ++ +G+  + V
Sbjct: 345 REVLDAMV--------SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +  L+ G  K      A  +   M   G   +   Y  LI  +   G+          M
Sbjct: 397 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 456

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL-DLVAKI-LEALLMRG 533
           +  G SP   ++ ++   L + GR   A  +++   E    E   D V +  ++ LL  G
Sbjct: 457 VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAG 516

Query: 534 HVEEALGRIDLMMQSGSVPNFD---SLLSVLSEKGKTIAAVKLLD 575
            +E ALG +  M++ G +P  +   SL++ L + G+   A  +L+
Sbjct: 517 KMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 561



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 229/524 (43%), Gaps = 54/524 (10%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V + L  +   E AL  F  +ER G    +R +H  +I  L +  K++ A  +  +M
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGC-TPNRRSHNTIILGLCQQSKIDQACQVFHEM 176

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K +  D   + +LI+   K G + E+ K+                             
Sbjct: 177 EAKDIPPDSWSYGILIDGLAKAGKLNEAYKL----------------------------- 207

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 F +ML  GI P+  TYNV++ G  L+  L+ A+  F+ M+S+G      T+N +
Sbjct: 208 ------FQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+ + +  K+DEA +L   M +    P V++Y+T+I G  ++ R DDA  + ++M     
Sbjct: 262 IDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           KP  VT   L+ GLC AG++ E ++VL  MV     P D   +  L+   C++G    A 
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP-DVVTYNTLVHGHCRAGQTERAR 380

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++L  M+   +      Y  L+   CKA     A  +  ++          S       +
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM--------KSSGCAPNLFT 432

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  +I   C  GQ       F +++  G+  D V +  L     K G    A EI++  G
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR-EG 491

Query: 442 RRGVPRDA---DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
           R  +  +A   + Y   ++  L  G+   A   +  M+  G  PA     S++  L + G
Sbjct: 492 RESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551

Query: 499 RVQTASRVMKSMVE--KGVKENLDLVAKILEALLMRGH-VEEAL 539
           +   A  V++ +++   G K      AK +E ++ +G+ +E+A+
Sbjct: 552 QGGEARAVLEEIMDLAYGGKAR-GKAAKFVEEMVGKGYEIEDAV 594


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 208/434 (47%), Gaps = 13/434 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K  +  D   + +LI    K    Q+++ +FD M   G+  +   Y  +   + +  +
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A+R F+KM + G      TYNV+L GF  S  L+ A    + +   G  L V+ Y  
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +ING  R ++ +EA   + +M  +NI+P V+ YT MI+G     R  +AL +  EM    
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           ++P+ + Y AL+ G CD G + E + +  E+ +    P +++  + + G+ CK+G +N A
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGM-CKNGLINKA 427

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM--- 378
             + K M +L        +  LI   CKA   + A +LL    + EI+ +P   L +   
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA-RLL--FYQMEIVRKPSLFLRLSQG 484

Query: 379 -----EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
                + +S   M++ LC +G   KA     QL+  GVL D   +N LI G  K GN + 
Sbjct: 485 TDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNING 544

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           AF++ K M  +G   D+  Y  LI+   R G   DA    + M++ G  P SS ++++M 
Sbjct: 545 AFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMT 604

Query: 493 SLFEDGRVQTASRV 506
               +  +  A  V
Sbjct: 605 WSCRENNISLALSV 618



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 202/457 (44%), Gaps = 35/457 (7%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L +  K+  A+ +   M   G   D   + VL+  + K G + ++  +  ++ + G    
Sbjct: 243 LCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILG 302

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V  Y  L   + R  RY  A  ++ KML E I+P    Y +M+ G     ++  A+    
Sbjct: 303 VIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLG 362

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M  RG+  D + YN +I G+     +DEAE L  E+ + +  P   +Y+ +I G     
Sbjct: 363 EMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNG 422

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             + A  IF EM+     P+ VT+ +L+ GLC A ++ E + +  +M     P    S+F
Sbjct: 423 LINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKP----SLF 478

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
           ++L      S   +   D+                 +++E  C++ M  +A KLL +LV+
Sbjct: 479 LRL------SQGTDKVFDI-------------ASLQVMMERLCESGMILKAYKLLMQLVD 519

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
             ++  P      +  +YN +I   C  G    A   F+++  KG + D V +  LI G 
Sbjct: 520 SGVL--P------DIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGL 571

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            + G  + A EI + M ++G   ++  Y  ++    R+   + A +     + D      
Sbjct: 572 YRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWED 631

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
              R V ES F++  +QTA R +  M  K   +N DL
Sbjct: 632 EKVRVVAES-FDNEELQTAIRRLLEMDIKS--KNFDL 665



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 119/540 (22%), Positives = 240/540 (44%), Gaps = 40/540 (7%)

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
           R+V+  D +   +++   + +  +   ++ +  I+ +   ++V++  +  +   E A+  
Sbjct: 93  RTVQ--DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVES 150

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  M+      D+  +N +++   R +    A  ++ +M + N+ P V++Y  +I G   
Sbjct: 151 FGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCK 210

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             +  DAL +FDEM    + PN + Y+ +L GLC A K+ + Q++  +M       +D  
Sbjct: 211 TCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGC-NRDLI 269

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH------YGILIENFCKAEMYDRAI 357
            +  LL   CKSG+L+ A  +L+ +      T+ GH      YG LI    +A  Y+ A 
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQLL------TKDGHILGVIGYGCLINGLFRARRYEEAH 323

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
               K++ + I  +P   L      Y  MI+ L   G+  +A     ++ ++G+  D + 
Sbjct: 324 MWYQKMLRENI--KPDVML------YTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTIC 375

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N LI+G    G  D A  +   + +     +   Y  LI    + G    A+     M 
Sbjct: 376 YNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEME 435

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM-----------VEKGVKENLDLVA-- 523
           + G  P+   F S++  L +  R++ A  +   M           + +G  +  D+ +  
Sbjct: 436 KLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQ 495

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            ++E L   G + +A   +  ++ SG +P+   ++ L++   + G    A KL      +
Sbjct: 496 VMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLK 555

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             + D  +Y  ++D L  AG+  +A  I  ++++KG V +  +   ++    +E N   A
Sbjct: 556 GHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLA 615



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 115/279 (41%), Gaps = 35/279 (12%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+E L   G +  A  +L+ +   GV  D   + +LI  + K G +  + K+F  M+  G
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY-NVMLWGF---FLSLKL 177
                 +Y  L   + R GR   A   F +M+ +G  P   TY  +M W      +SL L
Sbjct: 557 HMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616

Query: 178 ETAIRF------FEDMKSRGI--SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
              +++      +ED K R +  S D     T I    R  +MD        +K KN + 
Sbjct: 617 SVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAI---RRLLEMD--------IKSKNFD- 664

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            +  YT  + G V  +R  +A  IF  +K F +  ++ +   L+  LC    +     V 
Sbjct: 665 -LAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVF 723

Query: 290 REMVE---RYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
              +E   R +PP  N +   LL       HL+   D L
Sbjct: 724 LFTLERGFRLMPPICNQLLCNLL-------HLDRKDDAL 755


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 136/572 (23%), Positives = 244/572 (42%), Gaps = 53/572 (9%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           +N    L FF  +  +  F H   T+  MIE LGR  +++  + IL  M   G+   ED+
Sbjct: 52  RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  +I  Y + G  ++++K+F  + + G + +V+ Y+ L   +L   ++ M    +  M 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G+ P   TYN++L     + +++ A + F +M ++G   D VTY TM++   +  K+D
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A +L    K     P+V  Y  +I G     R + A+++  EM    V PN V+Y+ ++
Sbjct: 232 DARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC +G +     +  +M  R      ++ F  L+      G L  A D+ K MI+   
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHT-FTPLIKGCFMRGKLYEALDLWKLMIQDGC 345

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  LI   C     + A+++ D                                
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCD-------------------------------- 373

Query: 394 GQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
                      Q+ + G L  V  ++ LI G +K G+   A E    M   G   +   Y
Sbjct: 374 -----------QMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
            C+++   +      A + ++ M  +G +P +  F + ++ L  +GRV+ A ++++ M  
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G   N+    ++L+AL      EEA G    +      PN   ++++L   S  G    
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 542

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           A++L    L R    D  +Y  ++ A    GK
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/542 (23%), Positives = 234/542 (43%), Gaps = 37/542 (6%)

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           K+ ++QES    D++K+L  +R++ S    F  I                 S   + T  
Sbjct: 35  KQQLLQES----DVLKRLKTDRNLSSVLGFFSAIAN---------------SNAFQHTAS 75

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           TY VM+       +++      + MK  GI+     +  +INGY R    ++A K+F  +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
            E   +PTV  Y  ++   ++  +      ++  MK   + PN  TY  LL  LC   ++
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
               K+  EM  +  PP D   +  ++   CK+G ++ A + L    + S+P     Y  
Sbjct: 196 DAAHKLFVEMSNKGCPP-DAVTYTTMVSSLCKAGKIDDARE-LAGRFKPSVPV----YNA 249

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           LI+  CK    + AIKLL ++++  +        D    SY+ +I  LC +G    A   
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGV--------DPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 403 FRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           F Q+  +G    +  F  LI+G    G    A ++ K+M + G   +  AY  LI     
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
            G   +A    D M   G  P  + +  +++   + G +  AS     M+  G + N+  
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL 578
              +++ L      ++A   ++ M   G  PN   F++ +  L   G+   A+KLL+   
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
           G  C+ ++ +Y ++LDAL    K   A+ +  +I  +    +  + + ++ G ++ G   
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541

Query: 639 QA 640
           +A
Sbjct: 542 EA 543



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 131/281 (46%), Gaps = 6/281 (2%)

Query: 25  LVYNVL-HGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN L HG  ++   E ALQ    ++R+G    +  T+  +I+   + G L  A     
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCL-PNVTTYSILIDGFAKSGDLVGASETWN 408

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G + +   +  +++   K  +  ++  + + M   G   +  +++   K +   G
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNG 468

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A +   +M   G  P   TYN +L   F   K E A   F+++++R +  ++VTYN
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T++ G++R   M EA +LF +   +   P  I+Y TMI  Y    +   A ++ + + S 
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSM 588

Query: 261 -DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
            +  P+ +TYT+L+ G C+   + E    L + + + I P 
Sbjct: 589 KEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPN 629



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 108/217 (49%), Gaps = 1/217 (0%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  M+++L +    + A  ++  M  +G   +   F   I+     G V+ ++K+ + M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +  G   ++ +Y+ L   + R  +Y  A   F ++ +  ++P   TYN +L+GF  +  +
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE-KNIEPTVISYTT 236
             A++ F     RG + D +TYNTMI+ Y +  K+  A +L   +   K   P +I+YT+
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +I G       ++A+   D+  +  + PN  T+ AL+
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637


>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Brachypodium distachyon]
          Length = 821

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 162/656 (24%), Positives = 282/656 (42%), Gaps = 72/656 (10%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           A + +HA+  FRW++    +    + +  MI +  R  +++ AR +  +M +   + D D
Sbjct: 132 AGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDAD 191

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++  LI ++ + G  + ++ I D M +  +  S  +Y+ +       G +  A     KM
Sbjct: 192 IYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKM 251

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
              G+ P   T+N++L  F    +   AI +FE MK   I+ D  T N +I+   +  + 
Sbjct: 252 TRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQY 311

Query: 213 DEAEKLFAEMKEKNIE--PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
            EA +L   M+EK  +  P V++YT+++  Y    + +D   +FD M +  VKPN V+Y 
Sbjct: 312 GEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYN 371

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           ALL      G   +   + + + +  + P D   +  LL    +SG    A +  K M +
Sbjct: 372 ALLGAYASRGMHADALGIFKLLKQNGLRP-DVVSYTTLLNAYGRSGQPEKAREAFKEMRK 430

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII----------------LRPQS 374
            S       Y  LI+ +  A M+  AI LL ++ EK+ I                 R  +
Sbjct: 431 NSCRPNIVSYNALIDAYGSAGMFKEAISLLHEM-EKDGIPPDVVSISTLLTACGRCRQIT 489

Query: 375 TLD--MEAS----------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLI 421
            +D  +EA+           YN  I    + G  GKA   +  +M   V  D V +N LI
Sbjct: 490 KIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILI 549

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G  K G    + +  + M    +P   + Y  LI SY+++G+  +A++   SM E G  
Sbjct: 550 SGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCL 609

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P    + +++E+  +DG  + A  + K M    V+ +  + + ++EAL      E  L  
Sbjct: 610 PDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQL 669

Query: 542 IDLM--------------------------------------MQSGSVPNFDSLLSVLSE 563
           ++LM                                      + S SV   + LL+ L +
Sbjct: 670 MELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGK 729

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            GKT   +KL    +     + +++Y  +L  LLA GK    Y  + + ME  GV+
Sbjct: 730 CGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGK-WRKYIEVLQWMEDAGVS 784



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 160/383 (41%), Gaps = 19/383 (4%)

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           AG +     V R M  +      N ++  ++ +  +   ++ A  +   M       +A 
Sbjct: 132 AGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDAD 191

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI    +A  +  AI ++D ++   I   P S      ++YN +I      G   K
Sbjct: 192 IYNSLIHAHARAGQWRWAINIMDDMLRAAI---PPSR-----TTYNNVINACGAAGNWKK 243

Query: 399 AEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDS-AFEIVKIMGRRGVPRDADAYICLIE 457
           A    +++ + GV   +  +N++    K G+  S A    ++M    +  D      +I 
Sbjct: 244 ALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIH 303

Query: 458 SYLRKGEPADAKTALDSMIE--DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
             ++ G+  +A   L+SM E      P    + S+M S +  G+V+    V   MV +GV
Sbjct: 304 CLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGV 363

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
           K N+     +L A   RG   +ALG   L+ Q+G  P+   + +LL+     G+   A +
Sbjct: 364 KPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKARE 423

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGL 631
                    C  ++ SY  ++DA  +AG    A S+L + MEK G+  D  S   L+   
Sbjct: 424 AFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHE-MEKDGIPPDVVSISTLLTAC 482

Query: 632 NQEGNTKQADILSRMIRGEMSRG 654
              G  +Q   +  ++    SRG
Sbjct: 483 ---GRCRQITKIDTILEAAKSRG 502



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 1/261 (0%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+ +  V  A   N D  T+  +I  L +VGK   +     DM    +   ++++  LI
Sbjct: 526 ALELYA-VMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLI 584

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            SY K+G + E+   F  MK+ G    V +Y A+ +     G +  A   F +M    ++
Sbjct: 585 CSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQ 644

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P     + ++       + E  ++  E MK + I L+   Y  +I   +  +    A ++
Sbjct: 645 PDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEI 704

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              +       +V +   ++       + +  +++F +M S        TYT LL  L  
Sbjct: 705 IEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLA 764

Query: 279 AGKMVEVQKVLREMVERYIPP 299
            GK  +  +VL+ M +  + P
Sbjct: 765 VGKWRKYIEVLQWMEDAGVSP 785


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 160/651 (24%), Positives = 285/651 (43%), Gaps = 59/651 (9%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  +L   KN   A   F    R   + H    +  ++  L     + H   I+  +  +
Sbjct: 13  VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQ 72

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMM 144
             + DED+   +I++YGK  +   ++ +F  M+++ G E  ++SY+ L    +   +++ 
Sbjct: 73  ECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVK 132

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
            +  F    + G+ P   TYNV++       + E A  F   M   G   DV +Y+T+IN
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVIN 192

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV---------------------- 242
              +  K+D+A +LF EM E+ + P V  Y  +I G++                      
Sbjct: 193 DLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVY 252

Query: 243 --------------AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
                            R DD L+I+D MK  + + +  TY++L+ GLCD G + + + V
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESV 312

Query: 289 LREMVER--YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM-IRLSIPTEAGHYGILIE 345
             E+VER  +I   D   +  +LG  C+ G +  + ++ + M  R S+   +  Y ILI+
Sbjct: 313 FNELVERKAFI---DVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVS--YNILIK 367

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
              +    D A  +          L P      + ++Y   I  LC NG   KA    ++
Sbjct: 368 GLLENGKIDEATMIWR--------LMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQE 419

Query: 406 LMKK-GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +  K G LD  A+ ++I    K+   + A  +VK M + GV  ++     LI   +R   
Sbjct: 420 VESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
            +DA   +  M ++G  P    +  ++  L E G+   AS  +K M+E G+K +L   + 
Sbjct: 480 LSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSI 539

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           +L  L     +E AL      +QSG  P+    + L+  L   GK   A+ ++     R+
Sbjct: 540 LLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGL 631
           C  +L +Y  +++      +  N  ++++  M K G+  D  S + ++ GL
Sbjct: 600 CTANLVTYNTLMEGYFKV-RDSNRATVIWGYMYKMGLQPDIISYNTILKGL 649



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 174/397 (43%), Gaps = 30/397 (7%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L   G ++ A  +  ++ ++    D   +  ++  + + G ++ES++++
Sbjct: 289 DLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW 348

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            IM+Q     ++ SY+ L K +L  G+   A   +  M ++G      TY + + G  ++
Sbjct: 349 RIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVN 407

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A+   ++++S+G  LDV  Y ++I+   + ++++EA  L  EM +  +E      
Sbjct: 408 GYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVC 467

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I G +   R  DA  +   M      P  V+Y  L+ GLC+AGK  E    ++EM+E
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D   +  LLG  C+   +  A ++    ++  +  +   + ILI   C     D
Sbjct: 528 NGLKP-DLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLD 586

Query: 355 RAIKLL---------------DKLVEKEIILRPQST------------LDMEASSYNPMI 387
            A+ ++               + L+E    +R  +             L  +  SYN ++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTIL 646

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRG 423
           + LC   +   A  FF      G+   V  +N L+R 
Sbjct: 647 KGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRA 683



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 77/177 (43%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L   GK   A   + +M + G++ D   + +L+    +   ++ +++++    Q G+E  
Sbjct: 509 LCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPD 568

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V  ++ L   +   G+   A      M          TYN ++ G+F       A   + 
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWG 628

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            M   G+  D+++YNT++ G     ++  A + F + +   I PTV ++  +++  V
Sbjct: 629 YMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 26  VYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            Y++L G     +  E AL+ +    ++GL   D   H  +I  L  VGKL+ A  ++ +
Sbjct: 536 TYSILLGGLCRDRKIELALELWHQFLQSGL-EPDVMMHNILIHGLCSVGKLDDAMTVMAN 594

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  +    +   +  L+E Y K      +  I+  M ++G++  + SY+ + K +    R
Sbjct: 595 MEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHR 654

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVML 168
              A  +F+   + GI PT +T+N+++
Sbjct: 655 VSYAIEFFDDARNHGIFPTVYTWNILV 681


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 143/613 (23%), Positives = 260/613 (42%), Gaps = 63/613 (10%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           +Y +L    N   +++ F W      + H  + +  +I  LG  G+      +L+ M  +
Sbjct: 81  LYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDE 140

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMM 144
           G+ + E +F  ++  Y K G   ++ ++   M+ +   E + KSY+ + ++++    + +
Sbjct: 141 GIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKV 200

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   F  MLS  I PT  T+ V++  F    ++++A+    DM   G   + V Y T+I+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
             ++  +++EA +L  EM      P   ++  +I G    +R ++A ++ + M      P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320

Query: 265 NAVTYTALLPGLC-----DA--------------------------GKMVEVQKVLREMV 293
           + +TY  L+ GLC     DA                          G++ + + VL +MV
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
             Y    D   +  L+    K G +  A +VL  M           Y IL++ FCK    
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440

Query: 354 DRAIKLLD-------------------------KLVEKEIILR--PQSTLDMEASSYNPM 386
           D A  +L+                         ++ E   I R  P+     +  ++N +
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC   +   A    R ++ +GV+ + V +N LI    + G    A ++V  M  +G 
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
           P D   Y  LI+   R GE   A++  + M+ DGH+P++     ++  L   G V+ A  
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
             K MV +G   ++     ++  L   G +E+ L     +   G  P+   F++L+S L 
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680

Query: 563 EKGKTIAAVKLLD 575
           + G    A  LLD
Sbjct: 681 KGGFVYDACLLLD 693



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 254/559 (45%), Gaps = 32/559 (5%)

Query: 7   TTRLQNKIRALV---PQF-DHNLVYNVL-HGAKNSEHALQFFRWVER---AGLFNHDRET 58
           TTRL  ++R +    P F  +N+V  +L  G  +   A  F+  + R     LF     T
Sbjct: 165 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLF-----T 219

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
              +++    V +++ A  +L DM K G   +  +++ LI S  K   V E++++ + M 
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
            +G     ++++ +   + +  R   A +  N+ML  G  P   TY  ++ G     +++
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTM 237
            A    +D+  R    ++V +NT+I+G+    ++D+A+ + ++M     I P V +Y ++
Sbjct: 340 AA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY        AL +  +M++   KPN  +YT L+ G C  GK+ E   VL EM    +
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455

Query: 298 PPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
            P  N+V F  L+   CK   +  A ++ + M R     +   +  LI   C+ +    A
Sbjct: 456 KP--NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           + LL  ++ + ++            +YN +I      G+  +A     +++ +G  LD +
Sbjct: 514 LWLLRDMISEGVV--------ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYICLIESYLRKGEPADAKTALDS 474
            +N+LI+G  + G  D A  + + M R G  P +    I LI    R G   +A      
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI-LINGLCRSGMVEEAVEFQKE 624

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+  G +P    F S++  L   GR++    + + +  +G+  +      ++  L   G 
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684

Query: 535 VEEALGRIDLMMQSGSVPN 553
           V +A   +D  ++ G VPN
Sbjct: 685 VYDACLLLDEGIEDGFVPN 703



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 204/442 (46%), Gaps = 15/442 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D ET   +I  L +  ++N A  ++  M  +G   D+  +  L+    K G V  +  +F
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFL 173
             + +      +  ++ L    +  GR   AK   + M+ S GI P   TYN +++G++ 
Sbjct: 346 YRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
              +  A+    DM+++G   +V +Y  +++G+ +  K+DEA  +  EM    ++P  + 
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           +  +I  +    R  +A+ IF EM     KP+  T+ +L+ GLC+  ++     +LR+M+
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
              +   +   +  L+    + G +  A  ++  M+    P +   Y  LI+  C+A   
Sbjct: 522 SEGVV-ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VL 412
           D+A  L +K++         S +     S N +I  LC +G   +A  F ++++ +G   
Sbjct: 581 DKARSLFEKMLRDG---HAPSNI-----SCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D V FN+LI G  + G  +    + + +   G+P D   +  L+    + G   DA   L
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692

Query: 473 DSMIEDGHSPASSLFRSVMESL 494
           D  IEDG  P    +  +++S+
Sbjct: 693 DEGIEDGFVPNHRTWSILLQSI 714



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 13/312 (4%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L DM  KG + +   + +L++ + K G + E+  + + M   G++ +   ++ L     
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           +  R   A   F +M  +G +P  +T+N ++ G     +++ A+    DM S G+  + V
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYNT+IN + R  ++ EA KL  EM  +      I+Y ++IKG       D A  +F++M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
                 P+ ++   L+ GLC +G + E  +  +EMV R   P D   F  L+   C++G 
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP-DIVTFNSLINGLCRAGR 649

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK---------EI 368
           +     + + +    IP +   +  L+   CK      A  LLD+ +E           I
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709

Query: 369 ILR---PQSTLD 377
           +L+   PQ TLD
Sbjct: 710 LLQSIIPQETLD 721



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 144/298 (48%), Gaps = 1/298 (0%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           ++  +++   ++GK++ A  +L +M   G++ +   F  LI ++ K+  + E+V+IF  M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G +  V ++++L   +        A      M+SEG+     TYN ++  F    ++
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A +   +M  +G  LD +TYN++I G  R  ++D+A  LF +M      P+ IS   +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G       ++A+    EM      P+ VT+ +L+ GLC AG++ +   + R++    I
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
           PP D   F  L+   CK G +  A  +L   I          + IL+++    E  DR
Sbjct: 666 PP-DTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 128/251 (50%), Gaps = 5/251 (1%)

Query: 27  YNVLHGAKNSEH----ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N L  A   EH    A++ FR + R G    D  T   +I  L  V ++ HA  +L DM
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDM 520

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +GV  +   +  LI ++ ++G ++E+ K+ + M   G      +Y++L K + R G  
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F KML +G  P+  + N+++ G   S  +E A+ F ++M  RG + D+VT+N++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING  R  ++++   +F +++ + I P  +++ T++          DA  + DE      
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700

Query: 263 KPNAVTYTALL 273
            PN  T++ LL
Sbjct: 701 VPNHRTWSILL 711


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 258/556 (46%), Gaps = 37/556 (6%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
             L  AR     M   GV  +   + +L+ +   +G  +E++ I   M+  G   +V +Y
Sbjct: 169 ASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTY 228

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     R G    A+R    M   G++P   T+N M+ G   + K+E A + F++M  
Sbjct: 229 NTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVR 288

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G++ D V+YNT++ GY +     EA  +FAEM +K I P V+++T++I         + 
Sbjct: 289 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLER 348

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A+ +  +M+   ++ N VT+TAL+ G C  G + +    +R M +  I P     +  L+
Sbjct: 349 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPS-VVCYNALI 407

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G ++ A ++L  M    +  +   Y  +I  +CK      A +L  +++EK ++
Sbjct: 408 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL 467

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
                    +A +Y+ +I+ LC   +   A + F+ ++K G+  D   + +LI GH KEG
Sbjct: 468 --------PDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 519

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           N +SA  +   M + GV  D   Y  LI    +     +A+  L  +  +   PA++ + 
Sbjct: 520 NVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYD 579

Query: 489 SVMESLFE---------------DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           ++M    +                G +  A +V +SM+++    +  + + ++      G
Sbjct: 580 ALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAG 639

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSV---LSEKGKTIAA----VKLLDFCLGRD----- 581
           +V +AL     M+Q G  PN  S +S+   L E G  + A     +LL++C   D     
Sbjct: 640 NVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASK 699

Query: 582 CIIDLASYEKVLDALL 597
            +IDL   E  +DA+L
Sbjct: 700 ALIDLNLNEGNVDAVL 715



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 246/540 (45%), Gaps = 47/540 (8%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAG---LFNHDRETHLK--------MIEILGRVGKLN 73
           + YN L  A        FFR  E  G   L    RE  LK        M+  + + GK+ 
Sbjct: 226 VTYNTLVAA--------FFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKME 277

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            AR +  +M ++G+  D   +  L+  Y K G   E++ +F  M Q G+   V ++ +L 
Sbjct: 278 DARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI 337

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
            ++ + G    A     +M   G++    T+  ++ GF     L+ A+     MK   I 
Sbjct: 338 HVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIK 397

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
             VV YN +INGY    +MDEA +L  EM+ K ++P V++Y+T+I  Y        A  +
Sbjct: 398 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 457

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
             +M    V P+A+TY++L+  LC   ++ +   + + M++  + P D   +  L+   C
Sbjct: 458 NQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP-DEFTYTSLIDGHC 516

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G++ +A  +   M++  +  +   Y +LI    K+     A +LL KL  ++ I  P 
Sbjct: 517 KEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPI--PA 574

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSA 433
           +T       Y+ ++ H C      KAE+       K VL       L++G   +G  + A
Sbjct: 575 NT------KYDALM-HCCR-----KAEL-------KSVLA------LLKGFCMKGLMNEA 609

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            ++ + M  R    D   Y  LI  + R G    A +    M++ G +P S+   S++  
Sbjct: 610 DKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRG 669

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           LFE+G V  A +V++ ++      + +    +++  L  G+V+  L  +  M + G +P+
Sbjct: 670 LFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 5/197 (2%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN ++  L     T  A  FF  ++  GV   V  +N L+R     G+   A  I++ M
Sbjct: 158 AYNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDM 216

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G   +   Y  L+ ++ R GE   A+  +  M E G  P    F S++  + + G++
Sbjct: 217 RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKM 276

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
           + A +V   MV +G+  +      ++      G   EAL     M Q G +P+   F SL
Sbjct: 277 EDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 336

Query: 558 LSVLSEKGKTIAAVKLL 574
           + V+ + G    AV L+
Sbjct: 337 IHVMCKAGNLERAVTLV 353


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 157/658 (23%), Positives = 290/658 (44%), Gaps = 52/658 (7%)

Query: 18  VPQFDH-NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           +P +   N + + L  AK+ +H +     +    +F         +IE      K + A 
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLS-ALIESFVNTQKPSFAF 114

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            +L  + K+G   +   F +L++ + + G   +++ +F +MK+  +     SY+ +   +
Sbjct: 115 GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            +  R + AK  F +M     +P   T++ ++ GF  +  +E      E+M+  G+  DV
Sbjct: 175 CKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDV 234

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
             Y+ +I+G+     ++  ++LF EM  KN+ P V++Y+ ++      ++  +A ++ D 
Sbjct: 235 FVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDT 294

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    V+P+ V YT L  GL   G+  +  KVL  MV+R   P +N  +  ++   CK G
Sbjct: 295 MTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEP-NNVTYNAIINGLCKEG 353

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            ++ A  +L+ M +     +   Y  L++  C     D A+ LL+ L+ KE  ++P    
Sbjct: 354 RVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKP---- 409

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
             +  ++N +IQ LC   +   A+  +  ++++G   + V +N LI G+   G    A E
Sbjct: 410 --DVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALE 467

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           + K     G+  +A  Y  LI    +    + AK   +     G  P  S + ++M SL 
Sbjct: 468 LWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLC 527

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVA--KILEALLMRGHVEEA--------------- 538
            +  V+ A  + + M  +    + D+V+   I++  L  G VE A               
Sbjct: 528 RESSVEQARNLFQEM--RNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPD 585

Query: 539 -------------LGRID-------LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
                        LG++D        M+  G VP+   FDSLL   S KGKT   V +L 
Sbjct: 586 NITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQ 645

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
               +D ++D      +L  L    K ++   IL K  +   V      ++L+  LN+
Sbjct: 646 QMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKCNELLMKLNK 703



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 202/436 (46%), Gaps = 17/436 (3%)

Query: 125 SVKSYDALFKLI--LRRGR-YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           S+ SY +   LI  LR+ + Y       +KM S  + P   + + ++  F  + K   A 
Sbjct: 55  SIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAF 114

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
                +  RG  L+V  +N ++ G+ +     +A  LF  MK   + P  +SY T+I G 
Sbjct: 115 GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +R  +A  +F EMK  + KPN+VT++AL+ G C  G + E   +L EM E+     D
Sbjct: 175 CKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEM-EKMGLEGD 233

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             V+  L+   C  G +    ++   M+R ++      Y  L+   CK + +  A ++LD
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
            +   ++  RP      +  +Y  +   L  NG+   A      ++K+G  +P  V +N 
Sbjct: 294 TMTGCKV--RP------DVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE-EPNNVTYNA 344

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD-SMIED 478
           +I G  KEG  D A  I++ M ++G   D   Y  L++     G+  +A   L+  M ++
Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404

Query: 479 GH-SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            H  P    F  V++ L +  R++ A RV  +MVE+G   N+     +++  L  G + +
Sbjct: 405 FHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTK 464

Query: 538 ALGRIDLMMQSGSVPN 553
           AL      + SG  PN
Sbjct: 465 ALELWKDAVDSGISPN 480



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/429 (21%), Positives = 173/429 (40%), Gaps = 82/429 (19%)

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
           N  P+  S  T+I      +  D  + +  +M S  V P   + +AL             
Sbjct: 54  NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSAL------------- 100

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSG-HLNAAADVLKAMIRLSIPTEAGHYGILI 344
                  +E ++  +  S    +LG+  K G HLN                   ++ +L+
Sbjct: 101 -------IESFVNTQKPSFAFGVLGLIMKRGFHLNVY-----------------NFNLLL 136

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + FC++    +A+ L          +  ++ L  +  SYN +I  LC   +  +A+  F+
Sbjct: 137 KGFCQSGDSHKAMDLF--------CMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFK 188

Query: 405 QLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           + MK G   P  V F+ LI G  K G+ +  F +++ M + G+  D   Y  LI  +  K
Sbjct: 189 E-MKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSK 247

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G+    K   + M+    +P    +  +M +L +  + + A++++ +M   G K   D+V
Sbjct: 248 GDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT--GCKVRPDVV 305

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           A                              +  L   LS+ G+   A+K+LD  + R  
Sbjct: 306 A------------------------------YTVLADGLSKNGRASDAIKVLDLMVKRGE 335

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-D 641
             +  +Y  +++ L   G+  +A  IL  + +KG   D  +   L+ GL   G   +A D
Sbjct: 336 EPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVD 395

Query: 642 ILSRMIRGE 650
           +L+ ++  E
Sbjct: 396 LLNLLMSKE 404


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 136/587 (23%), Positives = 276/587 (47%), Gaps = 33/587 (5%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM-MAKRYFNK 151
           +F+++++SY +  ++ +++ I  + +  G    V SY+A+    +R  R +  A+  F +
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           ML   + P   TYN+++ GF  +  ++ A+  F+ M+++G   +VVTYNT+I+GY + +K
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           +D+  KL   M  K +EP +ISY  +I G     R  +   +  EM       + VTY  
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM-IR 330
           L+ G C  G   +   +  EM+   + P   + +  L+   CK+G++N A + L  M +R
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT-YTSLIHSMCKAGNMNRAMEFLDQMRVR 374

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
              P E   Y  L++ F +    + A ++L ++ +        +       +YN +I   
Sbjct: 375 GLCPNERT-YTTLVDGFSQKGYMNEAYRVLREMND--------NGFSPSVVTYNALINGH 425

Query: 391 CHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C  G+   A      + +KG+  D V+++ ++ G  +  + D A  + + M  +G+  D 
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  LI+ +  +    +A    + M+  G  P    + +++ +   +G ++ A ++   
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---------------F 554
           MVEKGV  ++   + ++  L  +    EA   +  +    SVP+               F
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605

Query: 555 DSLLSVL---SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
            S++S++     KG    A ++ +  LG++   D  +Y  ++     AG    AY++  +
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRG-EMSRGSQ 656
           +++ G +    +   L+  L++EG   + + ++  ++R  E+S   Q
Sbjct: 666 MVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQ 712



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 217/465 (46%), Gaps = 9/465 (1%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R G++     +L +M ++G   DE  +  LI+ Y K+G   +++ +   M + G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  SV +Y +L   + + G    A  + ++M   G+ P   TY  ++ GF     +  A 
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R   +M   G S  VVTYN +ING+    KM++A  +  +MKEK + P V+SY+T++ G+
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 D+ALR+  EM    +KP+ +TY++L+ G C+  +  E   +  EM+   +PP D
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP-D 519

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   C  G L  A  +   M+   +  +   Y +LI    K      A +LL 
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579

Query: 362 KLVEKEIILRP-------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLD 413
           KL  +E +          ++  ++E  S   +I+  C  G   +A+  F  ++ K    D
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
             A+N +I GH + G+   A+ + K M + G        I L+++  ++G+  +  + + 
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
            ++       +   + ++E    +G +     V+  M + G   N
Sbjct: 700 HVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 135/582 (23%), Positives = 269/582 (46%), Gaps = 49/582 (8%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           AE  +   L++++   V  F +N++      A N + AL  F  +E  G    +  T+  
Sbjct: 189 AENVFKEMLESQVSPNV--FTYNILIRGFCFAGNIDVALTLFDKMETKGCLP-NVVTYNT 245

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   ++ K++    +L  M  KG++ +   + V+I    ++G ++E   +   M + G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
                 +Y+ L K   + G +  A     +ML  G+ P+  TY  ++     +  +  A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            F + M+ RG+  +  TY T+++G+++   M+EA ++  EM +    P+V++Y  +I G+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               + +DA+ + ++MK   + P+ V+Y+ +L G C +  + E  +V REMVE+ I P D
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP-D 484

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   C+      A D+ + M+R+ +P +   Y  LI  +C     ++A++L +
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE-IFFRQLMKKGVLDPVAFNNL 420
           ++VEK ++  P      +  +Y+ +I  L    +T +A+ +  +   ++ V   V ++ L
Sbjct: 545 EMVEKGVL--P------DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I     E   +  F+ V               + LI+ +  KG   +A    +SM+   H
Sbjct: 597 I-----ENCSNIEFKSV---------------VSLIKGFCMKGMMTEADQVFESMLGKNH 636

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P  + +  ++      G ++ A  + K MV+ G   +   V  +++AL   G V E   
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696

Query: 541 RIDLMMQSGSVP----------------NFDSLLSVLSEKGK 566
            I  +++S  +                 N D +L VL+E  K
Sbjct: 697 VIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 212/440 (48%), Gaps = 11/440 (2%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           ++ D  T+  +I+   + G  + A  +  +M + G+      +  LI S  K G +  ++
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           +  D M+  G+  + ++Y  L     ++G    A R   +M   G  P+  TYN ++ G 
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
            ++ K+E AI   EDMK +G+S DVV+Y+T+++G+ R   +DEA ++  EM EK I+P  
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I+Y+++I+G+    R  +A  +++EM    + P+  TYTAL+   C  G + +  ++  E
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           MVE+ + P   +  + + G+  +S    A   +LK     S+P++   Y  LIEN C   
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT-YHTLIEN-CSNI 603

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDM--------EASSYNPMIQHLCHNGQTGKAEIFF 403
            +   + L+     K ++       +         + ++YN MI   C  G   KA   +
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLY 663

Query: 404 RQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           ++++K G +L  V    L++   KEG  +    ++  + R     +A+    L+E   R+
Sbjct: 664 KEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHRE 723

Query: 463 GEPADAKTALDSMIEDGHSP 482
           G        L  M +DG  P
Sbjct: 724 GNMDVVLDVLAEMAKDGFLP 743



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 218/464 (46%), Gaps = 14/464 (3%)

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           ++ A  +  +M +  V  +   + +LI  +   G +  ++ +FD M+  G   +V +Y+ 
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L     +  +     +    M  +G+EP   +YNV++ G     +++       +M  RG
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
            SLD VTYNT+I GY +     +A  + AEM    + P+VI+YT++I         + A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
              D+M+   + PN  TYT L+ G    G M E  +VLREM +    P   + +  L+  
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT-YNALING 424

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            C +G +  A  VL+ M    +  +   Y  ++  FC++   D A+++  ++VEK I  +
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI--K 482

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNP 430
           P +       +Y+ +IQ  C   +T +A   + ++++ G+  D   +  LI  +  EG+ 
Sbjct: 483 PDTI------TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           + A ++   M  +GV  D   Y  LI    ++    +AK  L  +  +   P+   + ++
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           +E+   +   ++   ++K    KG+    D   ++ E++L + H
Sbjct: 597 IENC-SNIEFKSVVSLIKGFCMKGMMTEAD---QVFESMLGKNH 636


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 136/572 (23%), Positives = 244/572 (42%), Gaps = 53/572 (9%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           +N    L FF  +  +  F H   T+  MIE LGR  +++  + IL  M   G+   ED+
Sbjct: 52  RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  +I  Y + G  ++++K+F  + + G + +V+ Y+ L   +L   ++ M    +  M 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G+ P   TYN++L     + +++ A + F +M ++G   D VTY TM++   +  K+D
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A +L    K     P+V  Y  +I G     R + A+++  EM    V PN V+Y+ ++
Sbjct: 232 DARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC +G +     +  +M  R      ++ F  L+      G L  A D+ K MI+   
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHT-FTPLIKGCFMRGKLYEALDLWKLMIQDGC 345

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  LI   C     + A+++ D                                
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCD-------------------------------- 373

Query: 394 GQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
                      Q+ + G L  V  ++ LI G +K G+   A E    M   G   +   Y
Sbjct: 374 -----------QMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
            C+++   +      A + ++ M  +G +P +  F + ++ L  +GRV+ A ++++ M  
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G   N+    ++L+AL      EEA G    +      PN   ++++L   S  G    
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 542

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           A++L    L R    D  +Y  ++ A    GK
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/542 (23%), Positives = 234/542 (43%), Gaps = 37/542 (6%)

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           K+ ++QES    D++K+L  +R++ S    F  I                 S   + T  
Sbjct: 35  KQQLLQES----DVLKRLKTDRNLSSVLGFFSAIAN---------------SNAFQHTAS 75

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           TY VM+       +++      + MK  GI+     +  +INGY R    ++A K+F  +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
            E   +PTV  Y  ++   ++  +      ++  MK   + PN  TY  LL  LC   ++
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
               K+  EM  +  PP D   +  ++   CK+G ++ A + L    + S+P     Y  
Sbjct: 196 DAAHKLFVEMSNKGCPP-DAVTYTTMVSSLCKAGKIDDARE-LAGRFKPSVPV----YNA 249

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           LI+  CK    + AIKLL ++++  +        D    SY+ +I  LC +G    A   
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGV--------DPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 403 FRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           F Q+  +G    +  F  LI+G    G    A ++ K+M + G   +  AY  LI     
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
            G   +A    D M   G  P  + +  +++   + G +  AS     M+  G + N+  
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL 578
              +++ L      ++A   ++ M   G  PN   F++ +  L   G+   A+KLL+   
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
           G  C+ ++ +Y ++LDAL    K   A+ +  +I  +    +  + + ++ G ++ G   
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541

Query: 639 QA 640
           +A
Sbjct: 542 EA 543



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 131/281 (46%), Gaps = 6/281 (2%)

Query: 25  LVYNVL-HGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN L HG  ++   E ALQ    ++R+G    +  T+  +I+   + G L  A     
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCL-PNVTTYSILIDGFAKSGDLVGASETWN 408

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G + +   +  +++   K  +  ++  + + M   G   +  +++   K +   G
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNG 468

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A +   +M   G  P   TYN +L   F   K E A   F+++++R +  ++VTYN
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T++ G++R   M EA +LF +   +   P  I+Y TMI  Y    +   A ++ + + S 
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSM 588

Query: 261 -DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
            +  P+ +TYT+L+ G C+   + E    L + + + I P 
Sbjct: 589 KEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPN 629



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 108/217 (49%), Gaps = 1/217 (0%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  M+++L +    + A  ++  M  +G   +   F   I+     G V+ ++K+ + M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +  G   ++ +Y+ L   + R  +Y  A   F ++ +  ++P   TYN +L+GF  +  +
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE-KNIEPTVISYTT 236
             A++ F     RG + D +TYNTMI+ Y +  K+  A +L   +   K   P +I+YT+
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +I G       ++A+   D+  +  + PN  T+ AL+
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 148/641 (23%), Positives = 285/641 (44%), Gaps = 39/641 (6%)

Query: 11  QNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
            +++  L+P+   + V N+L    N+E  L+FF WV R   F HD    + M+  L R  
Sbjct: 66  SSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDR 125

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSY 129
                    L +P   V+       ++I+S   +G V+  +++  +I        ++ S+
Sbjct: 126 ---------LFVPADNVRI------LMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSF 170

Query: 130 DALFKLILRRGRYMM---AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
                L+++ G++ M    +  + +ML+ GI P   T+N M+       K++ A      
Sbjct: 171 ST---LLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGH 227

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           +   G   D  TY ++I G+ +   +D A ++F  M +   +P  ++Y+ +I G  +  R
Sbjct: 228 IFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGR 287

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            ++A+ + +EM    ++P    YT  +  LCDAG+  E  K+L +M +R   P +   + 
Sbjct: 288 LEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGP-NVQTYT 346

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+    + G    A  V   M+   +   A  Y  LI        ++ A+ + + ++  
Sbjct: 347 ALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSH 406

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHS 425
           + +  P +       +YN +I+  C  G   KA   F Q++K G   + + +N +I  + 
Sbjct: 407 DSL--PNT------ETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYF 458

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K+G  ++A  ++++M   G+  D   Y  LI  + R G+   A +  + M+E G SP   
Sbjct: 459 KQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVV 518

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            + +++       +V  A  +   MVE G   +      ++        + EA      M
Sbjct: 519 TYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKM 578

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           ++ G +PN   + S +  L + G+T  A K+      RD   +L +Y  ++D L   G+ 
Sbjct: 579 VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQA 638

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            +A     ++++ G   +  +   L+ GL  +G   +AD L
Sbjct: 639 EDAE----RLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQL 675



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 255/572 (44%), Gaps = 36/572 (6%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI+IL   GK+  A  I+  +   G   D   +  LI  + K G +  + ++FD M + G
Sbjct: 208 MIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDG 267

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + +  +Y AL   +   GR   A     +M+ +GIEPT H Y + +     + +   A+
Sbjct: 268 CDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAV 327

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +    MK RG   +V TY  +I+G +R  K + A  ++ +M    + PT ++Y+ +I   
Sbjct: 328 KLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQL 387

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R + AL IF+ M S D  PN  TY  ++ G C  G + +   +  +M+ +  P  +
Sbjct: 388 YVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML-KAGPSPN 446

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++ +  K G++N A  +L+ M    +  +   Y  LI  F +    + A  L +
Sbjct: 447 VITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFN 506

Query: 362 KLVEKEI----------------ILRPQSTLDM-----------EASSYNPMIQHLCHNG 394
           ++VE  I                + +    L +            + +YN MI       
Sbjct: 507 EMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTN 566

Query: 395 QTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +AE F  +++K+G+L + + + + I G  K G    AF+I   M +R    +   Y 
Sbjct: 567 RISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYS 626

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI+   ++G+  DA+  LD    DG  P    + +++  L   GR   A ++++SM +K
Sbjct: 627 SLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKK 682

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAA 570
           G++ + ++   +L        VE AL   D M+ +G  P   ++ +L+  L +      A
Sbjct: 683 GLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKA 742

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
             +    L +    D   +  +LD LL  G+T
Sbjct: 743 QCMFQTMLKKHWNSDEVVWTVLLDGLLKEGET 774



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 255/553 (46%), Gaps = 23/553 (4%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L   G+L  A  +L +M  KG++     + + I S    G   E+VK+   M
Sbjct: 274 TYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKM 333

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+ G   +V++Y AL   + R G++ +A   ++KML++G+ PT  TY+ ++   ++  + 
Sbjct: 334 KKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRF 393

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           ETA+  FE M S     +  TYN +I G+     + +A  +F +M +    P VI+Y  +
Sbjct: 394 ETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNII 453

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  Y      ++A+R+ + MK   +K +  TY  L+ G    GK+     +  EMVE  I
Sbjct: 454 IHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGI 513

Query: 298 PPK---DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
            P     N++    L V      ++ A  +   M+       +G Y ++I  F K     
Sbjct: 514 SPNVVTYNAIINGYLTV----AKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRIS 569

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A     K+V++ ++  P         +Y   I  LC NG+T  A   F ++ K+    +
Sbjct: 570 EAENFCGKMVKQGLL--PN------VITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPN 621

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              +++LI G  +EG  + A  ++      G   + D Y  L+     KG   +A   ++
Sbjct: 622 LCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVE 677

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           SM + G  P+  ++R+++    ++  V++A ++  SMV  G +  L     ++ AL    
Sbjct: 678 SMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKAN 737

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
             ++A      M++     +   +  LL  L ++G+T  +++LL     R+C ++  +  
Sbjct: 738 FRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRV 797

Query: 591 KVLDALLAAGKTL 603
            +   L A G ++
Sbjct: 798 MLARELSALGCSI 810



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 203/436 (46%), Gaps = 24/436 (5%)

Query: 16  ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDR----ETHLKMIEILGRVG 70
            LVP    ++ + N L+     E AL  F W     + +HD     ET+  +I+    +G
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEW-----MLSHDSLPNTETYNVIIKGFCSIG 426

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            +  A  I   M K G   +   + ++I  Y K+G +  ++++ ++MK  G++    +Y 
Sbjct: 427 YIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYA 486

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L     R G+   A   FN+M+  GI P   TYN ++ G+    K++ A+  F  M   
Sbjct: 487 NLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES 546

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G      TYN MI+G+++  ++ EAE    +M ++ + P VI+YT+ I G     R   A
Sbjct: 547 GNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLA 606

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
            +IF EMK  D  PN  TY++L+ GLC  G+  + +++L +  E   P  D   +  L+ 
Sbjct: 607 FKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCE---PNVD--TYTTLVR 661

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             C  G    A  ++++M +  +      Y  L+   CK    + A+K+ D +V      
Sbjct: 662 GLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGF-- 719

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGN 429
             Q  L    S Y  +I  LC      KA+  F+ ++KK    D V +  L+ G  KEG 
Sbjct: 720 --QPCL----SDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGE 773

Query: 430 PDSAFEIVKIMGRRGV 445
            D + E++ +M  R  
Sbjct: 774 TDLSLELLHVMESRNC 789



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 214/500 (42%), Gaps = 47/500 (9%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           +T+  +I  L R GK   A  +   M   G+      +  LI     +G  + ++ IF+ 
Sbjct: 343 QTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEW 402

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M       + ++Y+ + K     G    A   F++ML  G  P   TYN+++  +F    
Sbjct: 403 MLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGY 462

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +  A+R  E MK  G+ LD  TY  +I+G++R  K++ A  LF EM E  I P V++Y  
Sbjct: 463 MNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNA 522

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I GY+ V + DDAL +F +M      P++ TY  ++ G     ++ E +    +MV++ 
Sbjct: 523 IINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQG 582

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P +   +   +   CK+G  + A  +   M +         Y  LI+  C+    + A
Sbjct: 583 LLP-NVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA 641

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA 416
            +LLD   E  +             +Y  +++ LC  G+  +A+                
Sbjct: 642 ERLLDDGCEPNV------------DTYTTLVRGLCGKGRCYEAD---------------- 673

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
                             ++V+ M ++G+    + Y  L+    +  E   A    DSM+
Sbjct: 674 ------------------QLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMV 715

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P  S +++++ +L +    Q A  + ++M++K    +  +   +L+ LL  G  +
Sbjct: 716 TTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETD 775

Query: 537 EALGRIDLMMQSGSVPNFDS 556
            +L  + +M       NF +
Sbjct: 776 LSLELLHVMESRNCTLNFQT 795


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 152/634 (23%), Positives = 277/634 (43%), Gaps = 15/634 (2%)

Query: 8   TRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILG 67
           T   N    L P F    + + L   ++S   +  F W  +   F        +++  LG
Sbjct: 41  TTTTNSATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLG 100

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK-QLGVERSV 126
           + G+ +  + IL +M       D D   V IESY   G+  E ++  D M+ + GV  + 
Sbjct: 101 KAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANT 160

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
             Y+ L  +++   +  + +   + M+S GI P   T+N+++     + ++  AI   E+
Sbjct: 161 HFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEE 220

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M+  G+  D  T+ T++ G+     +D A ++  +M E     T ++   ++ G+    R
Sbjct: 221 MEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGR 280

Query: 247 ADDALRIFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
            ++ALR  +EM   +   P+  T+  L+ GL   G +    +V+  M+     P D   +
Sbjct: 281 IEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP-DIYTY 339

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             L+   CK G ++ A  VL  MI          Y  +I   CK    + A KL   L  
Sbjct: 340 NSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTG 399

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
           K I+  P      +  +YN +IQ LC +     A   ++++  KG   D   +N LI   
Sbjct: 400 KGIL--P------DVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSL 451

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
              G    A  ++K M   G  R+   Y  LI+ + +    A+A+   D M   G S  S
Sbjct: 452 CFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNS 511

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             + ++++ L +  RV+ AS++M  M+ +G++ +      +L      G +++A   +  
Sbjct: 512 VTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQT 571

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M   G  P+   + +L++ L + G+  AA KLL     +   +   +Y  V+ AL    +
Sbjct: 572 MASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKR 631

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
           +  A  +  +++EK    D  +   +  GL Q G
Sbjct: 632 SKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 204/421 (48%), Gaps = 14/421 (3%)

Query: 37  EHALQFFRWVE-RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           E AL+F   +  R G F  D+ T   ++  L + G + HA  ++  M ++G   D   + 
Sbjct: 282 EEALRFIEEMSLREGFFP-DKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYN 340

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI    K G V E+VK+ + M +     +  +Y+ +   + +  +   A +    +  +
Sbjct: 341 SLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGK 400

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           GI P   TYN ++ G  LS     A+  +++MK++G   D  TYN +I+      K+ EA
Sbjct: 401 GILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEA 460

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             L  EM+       VI+Y T+I G+   +R  +A  IFD+M+   V  N+VTY  L+ G
Sbjct: 461 LNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDG 520

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC + ++ E  +++ +M+   + P D   +  LL   CK+G +  AAD+++ M       
Sbjct: 521 LCKSERVEEASQLMDQMIMEGLRP-DKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEP 579

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   YG LI   CKA   + A KLL  +  K I L P         +YNP+IQ L    +
Sbjct: 580 DIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPH--------AYNPVIQALFRRKR 631

Query: 396 TGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP-DSAFEIVKIMGRRG-VPRDADAY 452
           + +A   FR++++K    D V +  + RG  + G P   A + V  M  RG VP  +  Y
Sbjct: 632 SKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFY 691

Query: 453 I 453
           +
Sbjct: 692 M 692



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 127/546 (23%), Positives = 251/546 (45%), Gaps = 15/546 (2%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  +G++ D   F +LI++  +   ++ ++ + + M+  G+    K++  + +  +  G
Sbjct: 185 NMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEG 244

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR-GISLDVVTY 199
               A R   +M+  G   T  T NV++ GF    ++E A+RF E+M  R G   D  T+
Sbjct: 245 NLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTF 304

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N ++NG ++   +  A ++   M  +  +P + +Y ++I G   +   D+A+++ ++M  
Sbjct: 305 NMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIE 364

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
            D  PN VTY  ++  LC   ++ E  K+   +  + I P D   +  L+   C S +  
Sbjct: 365 RDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILP-DVCTYNSLIQGLCLSRNHT 423

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A ++ K M       +   Y +LI++ C       A+ LL    E E+     S     
Sbjct: 424 VAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLK---EMEV-----SGCARN 475

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +YN +I   C N +  +AE  F Q+  +GV  + V +N LI G  K    + A +++ 
Sbjct: 476 VITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMD 535

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G+  D   Y  L+  + + G+   A   + +M  DG  P    + +++  L + G
Sbjct: 536 QMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAG 595

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           RV+ A+++++++  KG+         +++AL  R   +EA+     M++    P+   + 
Sbjct: 596 RVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYK 655

Query: 556 SLLSVLSEKGKTIA-AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            +   L + G  I  AV  +   L R  + + +S+  + + L +         ++  +ME
Sbjct: 656 IVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVME 715

Query: 615 KGGVTD 620
           K   +D
Sbjct: 716 KAKFSD 721



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 231/465 (49%), Gaps = 15/465 (3%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           ++  N++ N L    + +HAL+    + R G F+ D  T+  +I  L ++G+++ A  +L
Sbjct: 301 KYTFNMLVNGLSKTGHVKHALEVMDMMLREG-FDPDIYTYNSLISGLCKLGEVDEAVKVL 359

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             M ++    +   +  +I +  K+  V+E+ K+  ++   G+   V +Y++L + +   
Sbjct: 360 NQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLS 419

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
             + +A   + +M ++G  P   TYN+++       KL+ A+   ++M+  G + +V+TY
Sbjct: 420 RNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITY 479

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+I+G+ + K++ EAE++F +M+ + +    ++Y T+I G    ER ++A ++ D+M  
Sbjct: 480 NTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIM 539

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             ++P+  TY +LL   C AG + +   +++ M      P D   +  L+   CK+G + 
Sbjct: 540 EGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEP-DIVTYGTLIAGLCKAGRVE 598

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           AA  +L+ +    I      Y  +I+   + +    A++L  +++EK            +
Sbjct: 599 AATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEK--------AEAPD 650

Query: 380 ASSYNPMIQHLCH-NGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           A +Y  + + LC   G  G+A  F  +++++G V +  +F  L  G        +  +++
Sbjct: 651 AVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLI 710

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
            ++  +   + +D  + +I  +L+  +  DA   L  ++ D   P
Sbjct: 711 DMVMEKA--KFSDNEVTMIRGFLKISKYQDALATLGGIL-DSRKP 752


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 224/455 (49%), Gaps = 22/455 (4%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M KKG   DE    V + +  + G V   ++ F  M  L VE +V S   +   + +RG 
Sbjct: 181 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 240

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             M ++  +++ ++G++    TYN  + G+F  L L         M+  G++ +VVTY  
Sbjct: 241 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTL 300

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G++   K++EA++LF EM+EK IE  V  YT++I           AL +FDEM    
Sbjct: 301 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 360

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P+A TY AL+ G+C AG+M   Q ++ EM  + I   +  +F  L+   C+SG ++ A
Sbjct: 361 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL-NPVIFNTLIDGYCESGMVDEA 419

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   M +  + ++   Y  +    CK    D A  LL  +VE+ +   P +       
Sbjct: 420 LRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV--SPNTM------ 471

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           S+  +I   C  G   +A+  FR++ +KG V + + +N LI G+SK GN   A ++   +
Sbjct: 472 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531

Query: 441 GRRG-VPRDADAYICLIESYLRKGEPADAKTAL-----DSMIEDGHSPASSLFRSVMESL 494
             RG +P   D Y C   + L  GE  D K  +     D M + G  P    + +++  L
Sbjct: 532 ENRGLIP---DVYTC---TSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 585

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
            +DGR + A ++   M E G+  +  + + ++ +L
Sbjct: 586 SKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 239/481 (49%), Gaps = 23/481 (4%)

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV---ERSVKSYDALFKLILRRGRYM- 143
           ++ E  F++L   Y    +  E+++ F+ M++ G    ERS      ++ L LRRG  + 
Sbjct: 152 KFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSC----LVYLLALRRGGQVD 207

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
              R+F +M++  +E T ++  ++L G      +E   +  +++ ++G+  +VVTYN  I
Sbjct: 208 SCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFI 267

Query: 204 NGYNRFKKMD--EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            GY  FK++D     ++   M+++ +   V++YT +I G+  + + ++A R+F+EM+   
Sbjct: 268 EGY--FKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 325

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           ++ +   YT+++   C +G +     +  EM ++ + P  ++    + GV CK+G + AA
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGV-CKAGQMEAA 384

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             ++  M    I      +  LI+ +C++ M D A++L       ++++  +  L+ +  
Sbjct: 385 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRL-------QVVMEKKG-LESDVF 436

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +   LC   +  +A+     ++++GV  + ++F  LI  + KEGN   A  + + M
Sbjct: 437 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREM 496

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G   +   Y  LI+ Y ++G   +A    D +   G  P      S++     DG+V
Sbjct: 497 EEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKV 556

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
             A ++   M ++G+  N+     ++  L   G  EEA    D M ++G  P+ D++ S 
Sbjct: 557 DMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPD-DTVYSS 615

Query: 561 L 561
           L
Sbjct: 616 L 616



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 209/488 (42%), Gaps = 83/488 (17%)

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           K +D LF++      +  A   F  M  +G      +  V L       ++++ +RFF  
Sbjct: 156 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRR 215

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M +  + + V +   +++G  +   ++   KL  E+  K ++  V++Y   I+GY     
Sbjct: 216 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 275

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
                 I   M+   V  N VTYT L+ G  + GK+ E Q++  EM E+ I   D  V+ 
Sbjct: 276 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEA-DVYVYT 334

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            ++   C+SG++                                    RA+ L D++ +K
Sbjct: 335 SIISCNCRSGNVK-----------------------------------RALVLFDEMTDK 359

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHS 425
            +I  P       A +Y  +I  +C  GQ   A++   ++  KG+ L+PV FN LI G+ 
Sbjct: 360 GLI--PS------AHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYC 411

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           + G  D A  +  +M ++G+  D  AY  +     +     +AK  L SM+E G SP + 
Sbjct: 412 ESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 471

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL------ 539
            F ++++   ++G    A RV + M EKG   N+     +++    RG+++EA       
Sbjct: 472 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531

Query: 540 ----------------------GRIDL-------MMQSGSVPN---FDSLLSVLSEKGKT 567
                                 G++D+       M Q G VPN   + +++S LS+ G++
Sbjct: 532 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 591

Query: 568 IAAVKLLD 575
             A KL D
Sbjct: 592 EEAFKLYD 599



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 179/382 (46%), Gaps = 45/382 (11%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           IL  M K+GV  +   + +LI  +   G ++E+ ++F+ M++ G+E  V  Y ++     
Sbjct: 282 ILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNC 341

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G    A   F++M  +G+ P+ HTY  ++ G   + ++E A     +M+ +GI L+ V
Sbjct: 342 RSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV 401

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +NT+I+GY     +DEA +L   M++K +E  V +Y ++  G   + R D+A  +   M
Sbjct: 402 IFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM 461

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               V PN +++T L+   C  G  VE ++V REM E+   P                  
Sbjct: 462 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVP------------------ 503

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                         +I T    Y +LI+ + K      A KL D+L  + +I  P     
Sbjct: 504 --------------NIIT----YNVLIDGYSKRGNMKEAHKLKDELENRGLI--P----- 538

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
            +  +   +I   C +G+   A   F ++ ++G++ + V +  +I G SK+G  + AF++
Sbjct: 539 -DVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 597

Query: 437 VKIMGRRGVPRDADAYICLIES 458
              M   G+  D   Y  L+ S
Sbjct: 598 YDEMKETGLTPDDTVYSSLVGS 619



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 212/472 (44%), Gaps = 11/472 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           +L++ V    K    AL+ F  +E+ G F+ D  + L  +  L R G+++        M 
Sbjct: 159 DLLFRVYADNKMFGEALEAFEHMEKKG-FHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
              V+       ++++   K+G V+   K+ D +   GV+ +V +Y+A  +   +R    
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
                   M  EG+     TY +++ GF    K+E A R FE+M+ +GI  DV  Y ++I
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +   R   +  A  LF EM +K + P+  +Y  +I G     + + A  + +EM+   + 
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 397

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N V +  L+ G C++G MV+    L+ ++E+     D   +  +    CK    + A  
Sbjct: 398 LNPVIFNTLIDGYCESG-MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 456

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +L +M+   +      +  LI+ +CK   +  A ++  ++ EK  +  P         +Y
Sbjct: 457 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV--PNII------TY 508

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I      G   +A     +L  +G++ D     +LI G   +G  D A ++   M +
Sbjct: 509 NVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ 568

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           RG+  +   Y  +I    + G   +A    D M E G +P  +++ S++ SL
Sbjct: 569 RGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 154/313 (49%), Gaps = 38/313 (12%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           A+R +    +  I A V  +   +  N   G  N + AL  F  +   GL      T+  
Sbjct: 314 AQRLFEEMREKGIEADVYVYTSIISCNCRSG--NVKRALVLFDEMTDKGLI-PSAHTYGA 370

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  + + G++  A+ ++ +M  KG+  +  +F  LI+ Y + G+V E++++  +M++ G
Sbjct: 371 LIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKG 430

Query: 122 VERSVKSYDA-----------------LFKLILR------------------RGRYMMAK 146
           +E  V +Y++                 LF ++ R                   G ++ AK
Sbjct: 431 LESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAK 490

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
           R F +M  +G  P   TYNV++ G+     ++ A +  +++++RG+  DV T  ++I+G 
Sbjct: 491 RVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGE 550

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
               K+D A KLF EM ++ + P V++YT MI G     R+++A +++DEMK   + P+ 
Sbjct: 551 CIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDD 610

Query: 267 VTYTALLPGLCDA 279
             Y++L+  L  A
Sbjct: 611 TVYSSLVGSLHSA 623



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 101/473 (21%), Positives = 193/473 (40%), Gaps = 21/473 (4%)

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL--FAEMKEKNIEPTVI 232
           L  E+ + FF  ++      D+  Y T+I    R +K D+  K   FAE++        +
Sbjct: 66  LTAESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHL-FNCAAV 124

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
                +   V     DDA    +E K    K     +  L     D     E  +    M
Sbjct: 125 DDGLRVPVTVIASLVDDAC---NESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHM 181

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
            ++     + S  + LL ++ + G +++     + M+ L +        I+++  CK   
Sbjct: 182 EKKGFHIDERSCLVYLLALR-RGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 240

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            +   KL+D++  K +             +YN  I+        G        + K+GV 
Sbjct: 241 VEMGRKLMDEVAAKGV--------KANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 292

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            + V +  LI G S  G  + A  + + M  +G+  D   Y  +I    R G    A   
Sbjct: 293 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 352

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            D M + G  P++  + +++  + + G+++ A  ++  M  KG+  N  +   +++    
Sbjct: 353 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 412

Query: 532 RGHVEEALGRIDLMMQ----SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            G V+EAL R+ ++M+       V  ++S+ S L +  +   A  LL   + R    +  
Sbjct: 413 SGMVDEAL-RLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 471

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           S+  ++D     G  + A  +  ++ EKG V +  + + LI G ++ GN K+A
Sbjct: 472 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 524


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 155/659 (23%), Positives = 285/659 (43%), Gaps = 68/659 (10%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I    R+G+L H       + K G + +  +   L++       ++E++ I 
Sbjct: 93  DLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDIL 152

Query: 115 -DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML-SEG--IEPTRHTYNVMLWG 170
              M +LG    V SY+ L K      R   A    + M  S+G    P   +Y  ++ G
Sbjct: 153 IKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVING 212

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           FF   +++ A   F +M  RGI  +VVTY T+I+G  + + +D AE +F +M +K ++P 
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
             +Y  +I GY+++ +  + +R+ +EM +  +KP+  TY +LL  LC+ G+  E +    
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFD 332

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            M+ + I P + +++  L+      G L+   D+L  M+   +  +   + I+   + K 
Sbjct: 333 SMIRKGIKP-NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
            M D A+ + +K+         Q  L  +  ++  +I  LC  G+   A + F Q+M +G
Sbjct: 392 AMIDEAMHIFNKM--------KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443

Query: 411 VLDPV-AFNNLIRG--------HSKEG---------NPDSAF------------------ 434
           V   +  FN+L+ G         +KE           PD  F                  
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ 503

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            ++ +M R G   D  +Y  LI  +   G   +A  +LD M+  G  P    + +++   
Sbjct: 504 RLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGY 563

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
              GR+  A  V + M+  G+   +   + IL  L       EA      M+ SG   N 
Sbjct: 564 CRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNI 623

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++ +L+ LS+      A KL      +D  +++ ++  ++ AL  +G+  +A  +   
Sbjct: 624 WIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFAT 683

Query: 612 IMEKGGVTD----------------WKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           I   G V D                 +  D L + + + G T  + +L+ ++R  + RG
Sbjct: 684 ISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRG 742



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 196/417 (47%), Gaps = 10/417 (2%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L+    +L  M + G+  D  +F ++  +Y KK ++ E++ IF+ MKQ G+   V ++
Sbjct: 357 GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNF 416

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            AL   + + GR   A   FN+M++EG+ P    +N +++G     K E A  F+ +M +
Sbjct: 417 GALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +GI  DVV +NT++       ++ +A++L   M+     P VISYTT+I G+  V R D+
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDE 536

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A +  D M S  +KP+  TY  LL G C AG++ +   V REM+   I P   +    L 
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILH 596

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
           G+   +   + A ++   MI          Y I++    K    D A KL   L  K+  
Sbjct: 597 GLF-TTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKD-- 653

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGH-SKEG 428
                   +E +++N MI  L  +G+   A   F  +   G++  V    LI  +  +EG
Sbjct: 654 ------FQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
             +   ++   M + G   ++     L+   L +G+   A   L  + E   S  +S
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEAS 764



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/564 (24%), Positives = 245/564 (43%), Gaps = 31/564 (5%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK-- 127
           G L HAR      P   + ++  +   +    G++    ES  +  +  ++  E ++K  
Sbjct: 39  GLLTHAR------PASIIAFNH-LLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91

Query: 128 ----SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
               +Y  L     R GR       F  +L  G        N +L G   + +L  A+  
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 184 F-EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF---AEMKEKNIEPTVISYTTMIK 239
             + M   G + DVV+YNT++ G+   K+ +EA +L    A+ + ++  P V+SY T+I 
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G+    + D A  +F EM    ++PN VTYT ++ GLC A  +   + V ++M+++ + P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            DN  +  L+      G       +L+ M    +  +   YG L+   C       A   
Sbjct: 272 -DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
            D ++ K I  +P   +      Y  +I      G   +       +++ G+  D   FN
Sbjct: 331 FDSMIRKGI--KPNVAI------YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFN 382

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            +   ++K+   D A  I   M ++G+  D   +  LI++  + G   DA    + M+ +
Sbjct: 383 IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNE 442

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G +P   +F S++  L    + + A      M+ +G++ ++     IL  L  +G V +A
Sbjct: 443 GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKA 502

Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEK---GKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
              IDLM + G+ P+  S  +++      G+   A K LD  L      D  +Y  +L  
Sbjct: 503 QRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHG 562

Query: 596 LLAAGKTLNAYSILFKIMEKGGVT 619
              AG+  +AY + F+ M + G+T
Sbjct: 563 YCRAGRIDDAYGV-FREMLRNGIT 585



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 114/544 (20%), Positives = 243/544 (44%), Gaps = 51/544 (9%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+ L +   ++ A  +   M  KGV+ D D +  LI  Y   G  +E V++ + M
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF------ 171
              G++    +Y +L   +   GR   A+ +F+ M+ +GI+P    Y +++ G+      
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 172 -----FLSLKLET------------------------AIRFFEDMKSRGISLDVVTYNTM 202
                 L+L +E                         A+  F  MK +G+S DVV +  +
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGAL 419

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+   +  ++D+A   F +M  + + P +  + +++ G   V++ + A   + EM +  +
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI 479

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P+ V +  +L  LC  G++++ Q+++ +++ER     D   +  L+G  C  G ++ AA
Sbjct: 480 RPDVVFFNTILCNLCTKGQVMKAQRLI-DLMERVGTRPDVISYTTLIGGHCLVGRIDEAA 538

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
             L  M+ + +  +   Y  L+  +C+A   D A  +  +++   I   P         +
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGIT--PG------VVT 590

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y+ ++  L    +  +A+  +  ++  G   +   +N ++ G SK    D AF++ + + 
Sbjct: 591 YSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLC 650

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            +    +   +  +I +  + G   DA     ++   G  P    +  + E+L E+G ++
Sbjct: 651 SKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLE 710

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRID---LMMQSGSVPNFD 555
               +  +M + G   N  ++  ++  LL RG +  A   L ++D     +++ +     
Sbjct: 711 EFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLI 770

Query: 556 SLLS 559
           SLLS
Sbjct: 771 SLLS 774



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/476 (21%), Positives = 202/476 (42%), Gaps = 10/476 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L   G+   AR     M +KG++ +  ++ +LI  Y  KG + E   + 
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           ++M + G+      ++ +F    ++     A   FNKM  +G+ P    +  ++      
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKL 426

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +++ A+  F  M + G++ ++  +N+++ G     K ++A++ + EM  + I P V+ +
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++       +   A R+ D M+    +P+ ++YT L+ G C  G++ E  K L  M+ 
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D   +  LL   C++G ++ A  V + M+R  I      Y  ++        + 
Sbjct: 547 VGLKP-DEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            A +L   ++         S        YN ++  L  N    +A   F+ L  K   L+
Sbjct: 606 EAKELYLNMI--------TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              FN +I    K G  + A  +   +   G+  D   Y  + E+ + +G   +      
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFS 717

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
           +M + G +P S +  +++  L   G +  A   +  + EK         A ++  L
Sbjct: 718 AMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLL 773


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 150/651 (23%), Positives = 300/651 (46%), Gaps = 27/651 (4%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           +++ +  L P     +V +V+   +  E   +FF W  R   F     TH  +I++L + 
Sbjct: 51  MEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVIDMLAKD 109

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
              +    IL ++    +Q     F VLI +Y K G+ +++V+ F  MK  G +  V +Y
Sbjct: 110 DGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTY 169

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           +++  +++++  +++A   +N+ML     P R T+ ++L G   + K + A++ F++M  
Sbjct: 170 NSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQ 229

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +GI  + + Y  +++G  + K+ D+  +L   MK     P  I+   ++ G+  + + D+
Sbjct: 230 KGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDE 289

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A  +    +          Y++L+ GL  A +  EVQ+  R+M +  I P D  ++  L+
Sbjct: 290 AFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEP-DVVLYTILI 348

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C+ G ++ A ++L  M +  +  +   Y  LI+ FC   + D+A  L  ++ + +  
Sbjct: 349 RGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCF 408

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEG 428
             P S       +Y  +I  +C NG   +A   F Q+   G    +  FN LI G  K G
Sbjct: 409 --PTS------CTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAG 460

Query: 429 NPDSAFEIVKIMGRRGVP-------RDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
             + A  +   M     P       + AD  +     + R     DA   LD M+++G +
Sbjct: 461 ELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCT 520

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA--- 538
           P+S++++ +M      G++  A  +    + + +    D   K+ E    +G +E+A   
Sbjct: 521 PSSAVYKCLMTWSCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLAEEHFEKGELEKAVRC 579

Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL--ASYEKVLDAL 596
           L  ++  + +  +  +   L  L +  ++  A+K+  F + ++C +D+   S   +++ L
Sbjct: 580 LLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKI--FLVLKECQMDVNPPSCVMLINGL 637

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
              G    A  I    +EKG +   +  ++L+  L  +   K A D+L+RM
Sbjct: 638 CKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRM 688


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 145/567 (25%), Positives = 252/567 (44%), Gaps = 19/567 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M ++ V  D   + +LI+   K G + ++  +F  +   GV  S  +Y +L   +     
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A+  F  M   G  P+  TYNV++        LE A    + M   G   DVVTYNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G  +  +++EA  LF EM+     P   S+ T+I G     + D A ++F EM++ D
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P++ +Y  L+ GL  AGK+ E  K+ R M++  I P   +  + + G+ C +  L+ A
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM-CLAYTLDEA 239

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            ++ K+M           + ILI+  CK    D A +LL ++ +   +         +  
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV--------PDVV 291

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-NNLIRGHSKEGNPDSAFEIVKIM 440
           +Y+ +I  LC   +   A      ++K+     V   N LI G  K G    A E++  M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G   D   Y  L+  + R G+   A+  L  M+  G +P    + +++  L +  R+
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A  V   M   G   NL     ++      G V+  L     M+ +G  P+   + +L
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLA----SYEKVLDALLAAGKTLNAYSILFKIM 613
            + L + G++  A+++L    GR+ +   A     Y   +D LL AGK   A   +  ++
Sbjct: 472 AAELCKSGRSARALEILRE--GRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMV 529

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             G +   +    L+AGL + G   +A
Sbjct: 530 RGGQLPAPERCASLVAGLCKSGQGGEA 556



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/525 (24%), Positives = 237/525 (45%), Gaps = 17/525 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            +  +I  L      + AR +  DM ++G       + V+I++  K+G+++E+  +   M
Sbjct: 47  AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKM 106

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G    V +Y+ +   + + GR   A   FN+M   G  P R ++N ++ G     K+
Sbjct: 107 IEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKI 166

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A + F +M++R I  D  +Y  +I+G  +  K++EA KLF  M +  I P+ ++Y  +
Sbjct: 167 DQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVV 226

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-Y 296
           I G       D+AL +F  M+S   +P+  T+  L+   C  GKM E  ++L+ M +  +
Sbjct: 227 IHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGH 286

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +P  D   +  L+   C    ++ A  +L+ M++            LI   CKA     A
Sbjct: 287 VP--DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
            ++LD +V         S    +  +YN ++   C  GQT +A      ++ +G+  + V
Sbjct: 345 REVLDAMV--------SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +  L+ G  K      A  +   M   G   +   Y  LI  +   G+          M
Sbjct: 397 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 456

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL-DLVAKI-LEALLMRG 533
           +  G SP   ++ ++   L + GR   A  +++   E    E   D V +  ++ LL  G
Sbjct: 457 VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAG 516

Query: 534 HVEEALGRIDLMMQSGSVPNFD---SLLSVLSEKGKTIAAVKLLD 575
            +E ALG +  M++ G +P  +   SL++ L + G+   A  +L+
Sbjct: 517 KMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 561



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 209/462 (45%), Gaps = 14/462 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +++ L + G++  A  +  +M + G   +      +I    ++  + ++ ++F
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+   +     SY  L   + + G+   A + F +ML  GI P+  TYNV++ G  L+
Sbjct: 174 HEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLA 233

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L+ A+  F+ M+S+G      T+N +I+ + +  KMDEA +L   M +    P V++Y
Sbjct: 234 YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTY 293

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           +T+I G  ++ R DDA  + ++M     KP  VT   L+ GLC AG++ E ++VL  MV 
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P D   +  L+   C++G    A ++L  M+   +      Y  L+   CKA    
Sbjct: 354 SGQSP-DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            A  +  ++          S       +Y  +I   C  GQ       F +++  G+  D
Sbjct: 413 EACGVFAQM--------KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA---DAYICLIESYLRKGEPADAKT 470
            V +  L     K G    A EI++  GR  +  +A   + Y   ++  L  G+   A  
Sbjct: 465 HVVYGTLAAELCKSGRSARALEILR-EGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALG 523

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
            +  M+  G  PA     S++  L + G+   A  V++ +++
Sbjct: 524 FVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 187/431 (43%), Gaps = 49/431 (11%)

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M E+N+ P   SY  +I G     + +DA  +F ++    V P+ V YT+L+ GL     
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGL----- 55

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
                                          C +   + A ++   M R   P     Y 
Sbjct: 56  -------------------------------CMANSFDDARELFADMNRRGCPPSPVTYN 84

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
           ++I+  CK  M + A  L+ K++E   +         +  +YN ++  LC +G+  +A +
Sbjct: 85  VIIDASCKRGMLEEACDLIKKMIEDGHV--------PDVVTYNTVMDGLCKSGRVEEALL 136

Query: 402 FFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F ++ + G   +  + N +I G  ++   D A ++   M  R +P D+ +Y  LI+   
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLA 196

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           + G+  +A      M++ G +P++  +  V+  +     +  A  + KSM  KG + +  
Sbjct: 197 KAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRF 256

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
               +++A   RG ++EA   +  M   G VP+   + +L+S L    +   A  LL+  
Sbjct: 257 TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
           + R C   + +   ++  L  AG+   A  +L  ++  G   D  + + L+ G  + G T
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376

Query: 638 KQA-DILSRMI 647
           ++A ++LS M+
Sbjct: 377 ERARELLSDMV 387



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 39/279 (13%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           SY  +I  L   G+   A   F++L+  GV    VA+ +LI G     + D A E+   M
Sbjct: 12  SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            RRG P                                   P+   +  ++++  + G +
Sbjct: 72  NRRGCP-----------------------------------PSPVTYNVIIDASCKRGML 96

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
           + A  ++K M+E G   ++     +++ L   G VEEAL   + M + G  PN    +++
Sbjct: 97  EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTI 156

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  L ++ K   A ++      RD   D  SY  ++D L  AGK   AY +  ++++ G 
Sbjct: 157 ILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGI 216

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQ 656
                + + +I G+       +A  L + +R +  R S+
Sbjct: 217 TPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 224/455 (49%), Gaps = 22/455 (4%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M KKG   DE    V + +  + G V   ++ F  M  L VE +V S   +   + +RG 
Sbjct: 185 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 244

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             M ++  +++ ++G++    TYN  + G+F  L L         M+  G++ +VVTY  
Sbjct: 245 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTL 304

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G++   K++EA++LF EM+EK IE  V  YT++I           AL +FDEM    
Sbjct: 305 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 364

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P+A TY AL+ G+C AG+M   Q ++ EM  + I   +  +F  L+   C+SG ++ A
Sbjct: 365 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL-NPVIFNTLIDGYCESGMVDEA 423

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   M +  + ++   Y  +    CK    D A  LL  +VE+ +   P +       
Sbjct: 424 LRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV--SPNTM------ 475

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           S+  +I   C  G   +A+  FR++ +KG V + + +N LI G+SK GN   A ++   +
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 535

Query: 441 GRRG-VPRDADAYICLIESYLRKGEPADAKTAL-----DSMIEDGHSPASSLFRSVMESL 494
             RG +P   D Y C   + L  GE  D K  +     D M + G  P    + +++  L
Sbjct: 536 ENRGLIP---DVYTC---TSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 589

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
            +DGR + A ++   M E G+  +  + + ++ +L
Sbjct: 590 SKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 243/492 (49%), Gaps = 25/492 (5%)

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV---ERSVKSYDALFKLILRRGRYM- 143
           ++ E  F++L   Y    +  E+++ F+ M++ G    ERS      ++ L LRRG  + 
Sbjct: 156 KFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSC----LVYLLALRRGGQVD 211

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
              R+F +M++  +E T ++  ++L G      +E   +  +++ ++G+  +VVTYN  I
Sbjct: 212 SCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFI 271

Query: 204 NGYNRFKKMD--EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            GY  FK++D     ++   M+++ +   V++YT +I G+  + + ++A R+F+EM+   
Sbjct: 272 EGY--FKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 329

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           ++ +   YT+++   C +G +     +  EM ++ + P  ++    + GV CK+G + AA
Sbjct: 330 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGV-CKAGQMEAA 388

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             ++  M    I      +  LI+ +C++ M D A++L       ++++  +  L+ +  
Sbjct: 389 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRL-------QVVMEKKG-LESDVF 440

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +   LC   +  +A+     ++++GV  + ++F  LI  + KEGN   A  + + M
Sbjct: 441 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREM 500

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G   +   Y  LI+ Y ++G   +A    D +   G  P      S++     DG+V
Sbjct: 501 EEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKV 560

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A ++   M ++G+  N+     ++  L   G  EEA    D M ++G  P+   + SL
Sbjct: 561 DMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSL 620

Query: 558 LSVLSEKGKTIA 569
           +  L    ++I+
Sbjct: 621 VGSLHSADESIS 632



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 179/382 (46%), Gaps = 45/382 (11%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           IL  M K+GV  +   + +LI  +   G ++E+ ++F+ M++ G+E  V  Y ++     
Sbjct: 286 ILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNC 345

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G    A   F++M  +G+ P+ HTY  ++ G   + ++E A     +M+ +GI L+ V
Sbjct: 346 RSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV 405

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +NT+I+GY     +DEA +L   M++K +E  V +Y ++  G   + R D+A  +   M
Sbjct: 406 IFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM 465

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               V PN +++T L+   C  G  VE ++V REM E+   P                  
Sbjct: 466 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVP------------------ 507

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                         +I T    Y +LI+ + K      A KL D+L  + +I  P     
Sbjct: 508 --------------NIIT----YNVLIDGYSKRGNMKEAHKLKDELENRGLI--P----- 542

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
            +  +   +I   C +G+   A   F ++ ++G++ + V +  +I G SK+G  + AF++
Sbjct: 543 -DVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 601

Query: 437 VKIMGRRGVPRDADAYICLIES 458
              M   G+  D   Y  L+ S
Sbjct: 602 YDEMKETGLTPDDTVYSSLVGS 623



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/518 (23%), Positives = 222/518 (42%), Gaps = 83/518 (16%)

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           K +D LF++      +  A   F  M  +G      +  V L       ++++ +RFF  
Sbjct: 160 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRR 219

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M +  + + V +   +++G  +   ++   KL  E+  K ++  V++Y   I+GY     
Sbjct: 220 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 279

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
                 I   M+   V  N VTYT L+ G  + GK+ E Q++  EM E+ I   D  V+ 
Sbjct: 280 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEA-DVYVYT 338

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            ++   C+SG++                                    RA+ L D++ +K
Sbjct: 339 SIISCNCRSGNVK-----------------------------------RALVLFDEMTDK 363

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHS 425
            +I  P       A +Y  +I  +C  GQ   A++   ++  KG+ L+PV FN LI G+ 
Sbjct: 364 GLI--PS------AHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYC 415

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           + G  D A  +  +M ++G+  D  AY  +     +     +AK  L SM+E G SP + 
Sbjct: 416 ESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 475

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            F ++++   ++G    A RV + M EKG   N+     +++    RG+++EA    D +
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 535

Query: 546 MQSGSVPNFDSLLSVLSEK---GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
              G +P+  +  S++  +   GK   A+KL D                           
Sbjct: 536 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD--------------------------- 568

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
                   ++ ++G V +  +   +I+GL+++G +++A
Sbjct: 569 --------EMPQRGLVPNVVTYTAMISGLSKDGRSEEA 598



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 212/472 (44%), Gaps = 11/472 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           +L++ V    K    AL+ F  +E+ G F+ D  + L  +  L R G+++        M 
Sbjct: 163 DLLFRVYADNKMFGEALEAFEHMEKKG-FHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
              V+       ++++   K+G V+   K+ D +   GV+ +V +Y+A  +   +R    
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
                   M  EG+     TY +++ GF    K+E A R FE+M+ +GI  DV  Y ++I
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +   R   +  A  LF EM +K + P+  +Y  +I G     + + A  + +EM+   + 
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 401

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N V +  L+ G C++G MV+    L+ ++E+     D   +  +    CK    + A  
Sbjct: 402 LNPVIFNTLIDGYCESG-MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 460

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +L +M+   +      +  LI+ +CK   +  A ++  ++ EK  +  P         +Y
Sbjct: 461 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV--PNII------TY 512

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I      G   +A     +L  +G++ D     +LI G   +G  D A ++   M +
Sbjct: 513 NVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ 572

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           RG+  +   Y  +I    + G   +A    D M E G +P  +++ S++ SL
Sbjct: 573 RGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 158/320 (49%), Gaps = 38/320 (11%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           A+R +    +  I A V  +   +  N   G  N + AL  F  +   GL      T+  
Sbjct: 318 AQRLFEEMREKGIEADVYVYTSIISCNCRSG--NVKRALVLFDEMTDKGLI-PSAHTYGA 374

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  + + G++  A+ ++ +M  KG+  +  +F  LI+ Y + G+V E++++  +M++ G
Sbjct: 375 LIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKG 434

Query: 122 VERSVKSYDA-----------------LFKLILR------------------RGRYMMAK 146
           +E  V +Y++                 LF ++ R                   G ++ AK
Sbjct: 435 LESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAK 494

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
           R F +M  +G  P   TYNV++ G+     ++ A +  +++++RG+  DV T  ++I+G 
Sbjct: 495 RVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGE 554

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
               K+D A KLF EM ++ + P V++YT MI G     R+++A +++DEMK   + P+ 
Sbjct: 555 CIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDD 614

Query: 267 VTYTALLPGLCDAGKMVEVQ 286
             Y++L+  L  A + + +Q
Sbjct: 615 TVYSSLVGSLHSADESISMQ 634



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 101/473 (21%), Positives = 193/473 (40%), Gaps = 21/473 (4%)

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL--FAEMKEKNIEPTVI 232
           L  E+ + FF  ++      D+  Y T+I    R +K D+  K   FAE++        +
Sbjct: 70  LTAESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHL-FNCAAV 128

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
                +   V     DDA    +E K    K     +  L     D     E  +    M
Sbjct: 129 DDGLRVPVTVIASLVDDAC---NESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHM 185

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
            ++     + S  + LL ++ + G +++     + M+ L +        I+++  CK   
Sbjct: 186 EKKGFHIDERSCLVYLLALR-RGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 244

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            +   KL+D++  K +             +YN  I+        G        + K+GV 
Sbjct: 245 VEMGRKLMDEVAAKGV--------KANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 296

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            + V +  LI G S  G  + A  + + M  +G+  D   Y  +I    R G    A   
Sbjct: 297 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 356

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            D M + G  P++  + +++  + + G+++ A  ++  M  KG+  N  +   +++    
Sbjct: 357 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 416

Query: 532 RGHVEEALGRIDLMMQ----SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            G V+EAL R+ ++M+       V  ++S+ S L +  +   A  LL   + R    +  
Sbjct: 417 SGMVDEAL-RLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 475

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           S+  ++D     G  + A  +  ++ EKG V +  + + LI G ++ GN K+A
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 528


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 212/430 (49%), Gaps = 12/430 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + L+  +    K S+  +   R VE       D  T+  ++  + R G  + A  +L  M
Sbjct: 162 NTLINGLCLEGKVSKAVVLVDRMVENG--CQPDMVTYNSIVNGICRSGDTSLAFDMLRKM 219

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ V+ D   +  +I+S  + G +  ++ +F  M+  G++ SV +Y++L + + + G++
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                    M+S  I P   T+NV+L  F    KL+ A   +++M +RGIS +++TYNT+
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++GY    ++ EA  +   M      P ++++T++IKGY  V+R DD +++F  +    +
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             NAVTY+ L+ G C +GK+   +++ +EMV   + P D   +  LL   C +G L  A 
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGILLDGLCDNGKLEKAL 458

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++ + + +  +      Y  +IE  CK    + A  L   L        P   +     +
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL--------PCKGVKPNVMT 510

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  MI  LC  G   +A I  R++ + G   +   +N LIR H ++G+  ++ ++++ M 
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570

Query: 442 RRGVPRDADA 451
             G   DA +
Sbjct: 571 SCGFSADASS 580



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/517 (23%), Positives = 235/517 (45%), Gaps = 11/517 (2%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D +  ++ +   K     L F + +E  G+  H+  T   MI    R  K   
Sbjct: 83  RPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI-AHNIYTLNIMINCFCRCCKTCF 141

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +L  + K G + D   F  LI     +G V ++V + D M + G +  + +Y+++  
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            I R G   +A     KM    ++    TY+ ++        ++ AI  F++M+++GI  
Sbjct: 202 GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            VVTYN+++ G  +  K ++   L  +M  + I P VI++  ++  +V   +  +A  ++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM +  + PN +TY  L+ G C   ++ E   +L  MV     P D   F  L+   C 
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP-DIVTFTSLIKGYCM 380

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              ++    V + + +  +   A  Y IL++ FC++     A +L  ++V   ++  P  
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL--P-- 436

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
               +  +Y  ++  LC NG+  KA   F  L K  + L  V +  +I G  K G  + A
Sbjct: 437 ----DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           + +   +  +GV  +   Y  +I    +KG  ++A   L  M EDG++P    + +++ +
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
              DG +  ++++++ M   G   +   +  +++ LL
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 123/510 (24%), Positives = 219/510 (42%), Gaps = 48/510 (9%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           +   F  I R  ++ +   +  ++   GI    +T N+M+  F    K   A      + 
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 189 SRGISLDVVTYNTMING----------------------------YN-------RFKKMD 213
             G   D  T+NT+ING                            YN       R     
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A  +  +M+E+N++  V +Y+T+I         D A+ +F EM++  +K + VTY +L+
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC AGK  +   +L++MV R I P +   F  LL V  K G L  A ++ K MI   I
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  L++ +C       A  +LD +V      R + + D+   ++  +I+  C  
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMV------RNKCSPDI--VTFTSLIKGYCMV 381

Query: 394 GQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +       FR + K+G V + V ++ L++G  + G    A E+ + M   GV  D   Y
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L++     G+   A    + + +        ++ +++E + + G+V+ A  +  S+  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           KGVK N+     ++  L  +G + EA   +  M + G+ PN   +++L+      G   A
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
           + KL++         D +S + V+D LL+ 
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLSG 591



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 218/478 (45%), Gaps = 15/478 (3%)

Query: 173 LSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           + +K + AI  F++M +SR +   +V ++   +   R K+ +       +++   I   +
Sbjct: 65  VDIKKDDAIALFQEMIRSRPLP-GLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +   MI  +    +   A  +  ++     +P+  T+  L+ GLC  GK+ +   ++  
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDR 183

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           MVE    P D   +  ++   C+SG  + A D+L+ M   ++  +   Y  +I++ C+  
Sbjct: 184 MVENGCQP-DMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             D AI L  ++  K I             +YN +++ LC  G+     +  + ++ + +
Sbjct: 243 CIDAAISLFKEMETKGI--------KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294

Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
           + + + FN L+    KEG    A E+ K M  RG+  +   Y  L++ Y  +   ++A  
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            LD M+ +  SP    F S+++      RV    +V +++ ++G+  N    + +++   
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G ++ A      M+  G +P+   +  LL  L + GK   A+++ +        + + 
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            Y  +++ +   GK  +A+++   +  KG   +  +   +I+GL ++G+  +A+IL R
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 141/614 (22%), Positives = 290/614 (47%), Gaps = 44/614 (7%)

Query: 21  FDHNLVYNVL--HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           F +N + N+L  +G  N  H  + +  ++  G+   D  T    I+   R  +   A  +
Sbjct: 112 FSYNAIMNILVEYGYFNQAH--KVYLRMKHEGI-APDVCTFTIRIKSFCRTKRPLAALRL 168

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           L +MP +G + +  ++  +I  + ++    E+ ++F+ M +LG+   + +++ L  ++ +
Sbjct: 169 LNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCK 228

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI-------RFFEDMKSRG 191
           +G     ++  NK+L  G+ P   T+N+ + G      LE A         +   M ++G
Sbjct: 229 KGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKG 288

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           +  D  TYNT+I GY++  K+ +A ++  + K K   P   +Y ++I G       D AL
Sbjct: 289 LEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHAL 348

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            +F+E     +KP+ V Y  L+ GL   G +++  +++ +M +  + P D   +  ++  
Sbjct: 349 ALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSP-DIWTYNLVING 407

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL----VEKE 367
            CK G ++ A ++L A I      +   +  LI+ +CK    D AI +LD +    V  +
Sbjct: 408 LCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPD 467

Query: 368 IIL------------RPQSTLD-----MEAS------SYNPMIQHLCHNGQTGKAEIFFR 404
           +I             +P+  ++     ME        +YN +I+ LC   +  +A     
Sbjct: 468 VITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLE 527

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR-GVPRDADAYICLIESYLRK 462
           ++  +G++ DPV+F  +I G    G+ D A+++ + M ++  +      Y  +I ++  K
Sbjct: 528 EIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEK 587

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
            +   A+     M + G  P S  +R +++   + G V +    +   +E G   +L   
Sbjct: 588 LDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTF 647

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
            +++  L ++  V EA+G + LM+++G VP  ++++++     K +AA K++   L +  
Sbjct: 648 GRVINCLCVQHRVHEAVGIVHLMVRTGVVP--EAVVTIFDADKKAVAAPKIIVEDLLKKS 705

Query: 583 IIDLASYEKVLDAL 596
            I   +YE + D +
Sbjct: 706 HITYYAYELLYDGI 719



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 165/667 (24%), Positives = 286/667 (42%), Gaps = 54/667 (8%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
           VL   K+   AL  F  V++   F H   T+ +MIE LG  G+ +    +L++M    + 
Sbjct: 13  VLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMR---LN 69

Query: 89  WDEDMFEVL----IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            D  + E +    + +YG+KG VQE+V +F+ M     E S+ SY+A+  +++  G +  
Sbjct: 70  VDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQ 129

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A + + +M  EGI P   T+ + +  F  + +   A+R   +M S+G  L+ V Y T+I+
Sbjct: 130 AHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVIS 189

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G+       EA +LF +M    I P + ++  ++          +  ++ +++    V P
Sbjct: 190 GFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCP 249

Query: 265 NAVTYTALLPGLCDAG-------KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           N  T+   + GLC  G       K+VE +  L +MV + + P D +    + G   K G 
Sbjct: 250 NLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYS-KVGK 308

Query: 318 LNAAADVLK-AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
           +  A+ +LK A  +  +P E   Y  LI   C+    D A+ L ++ + K   L+P   L
Sbjct: 309 IQDASRILKDAKFKGFVPDEFT-YCSLIIGVCQDGDIDHALALFEEALGKG--LKPSIVL 365

Query: 377 ----------------------DMEAS-------SYNPMIQHLCHNGQTGKAEIFFRQLM 407
                                 DM          +YN +I  LC  G    A       +
Sbjct: 366 YNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAI 425

Query: 408 KKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
            KG L D   FN LI G+ K    D+A  I+  M   GV  D   Y  ++    +  +P 
Sbjct: 426 AKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPE 485

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           D       ++E G  P    +  ++ESL +  +V  A  +++ +  +G+  +      ++
Sbjct: 486 DVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVI 545

Query: 527 EALLMRGHVEEALGRIDLMMQ----SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
                 G ++EA      M Q      +V  ++ +++  SEK     A KL      + C
Sbjct: 546 SGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGC 605

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-D 641
             D  +Y  ++D     G   + Y  L K +E G V    +  ++I  L  +    +A  
Sbjct: 606 DPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVG 665

Query: 642 ILSRMIR 648
           I+  M+R
Sbjct: 666 IVHLMVR 672


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 159/670 (23%), Positives = 293/670 (43%), Gaps = 67/670 (10%)

Query: 19  PQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL--KMIEILGRVGKLNHA 75
           P F  + ++   L  A+  E AL+  R ++  G   ++   HL   ++  L R G++  A
Sbjct: 43  PAFSAYTVLIGALAEARRPERALELLRQMQEVG---YEVGVHLFTTLVRALAREGQVADA 99

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             ++ ++    ++ D  ++ V I+ +GK G V  + K F  +K  G++    SY ++  +
Sbjct: 100 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWV 159

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           + + GR   A+  F +M +E   P  + YN M+ G+  + + E A +  E ++ RG    
Sbjct: 160 LCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 219

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VV++N+++    + +K+DEA  LF  MK K+ EP   +Y  +I       R ++A RI D
Sbjct: 220 VVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILD 278

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM+   + PN +T   ++  LC A K+ E  K+     +R   P D   +  L+    K 
Sbjct: 279 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP-DCVTYCSLIDGLGKK 337

Query: 316 GHLNAAADVLKAMIRLSIPTEAGH------YGILIENFCKAEMYDRAIKLLDKLVEKEII 369
           G ++ A  + + M+      +AGH      Y  LI NF      +   K+  +L+ +   
Sbjct: 338 GQVDEAYRLFEKML------DAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC- 390

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEG 428
            +P  TL       N  +  +   G+  K  + F  +   G L  V +++ LI G +K G
Sbjct: 391 -KPDLTL------LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 443

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
                  I   M ++G   DA AY  +++ + + G+   A   L+ M E    P  + + 
Sbjct: 444 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 503

Query: 489 SVMESL------------FED-----------------------GRVQTASRVMKSMVEK 513
           ++++ L            FE+                       GR+  A  +++ M++K
Sbjct: 504 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 563

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G+  N+     +L+AL+    + EAL     M +    PN   +  L++ L    K   A
Sbjct: 564 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA 623

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
                    +  + ++ +Y  ++  L   G   +AYS+  +    GG+ D  S + LI G
Sbjct: 624 FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 683

Query: 631 LNQEGNTKQA 640
           ++      +A
Sbjct: 684 MSNANRAMEA 693



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 194/413 (46%), Gaps = 11/413 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N++ + L  A+  E A + F    + G  N D  T+  +I+ LG+ G+++ A  +   M 
Sbjct: 293 NIMVDRLCKARKLEEAYKIFESASQRGC-NPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 351

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
             G   +  ++  LI ++   G  ++  K+F  + + G +  +   +     + + G   
Sbjct: 352 DAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 411

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
             +  F  + S G  P   +Y++++ G   + +       F  MK +G +LD   YN ++
Sbjct: 412 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 471

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G+ +  K+ +A ++  EMKEK ++PTV +Y  ++ G   ++R D+A  +F+E KS  ++
Sbjct: 472 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 531

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N V Y++L+ G    G++ E   +L EM+++ + P +   +  LL    K+  +N A  
Sbjct: 532 LNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP-NVYTWNSLLDALVKAEEINEALV 590

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
             ++M  +  P     Y ILI   C+ + Y++A      + ++ ++  P         +Y
Sbjct: 591 CFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV--PNVV------TY 642

Query: 384 NPMIQHLCHNGQ-TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFE 435
             MI  L   G  T    +F R     G+ D  +FN LI G S       A++
Sbjct: 643 TTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 119/548 (21%), Positives = 232/548 (42%), Gaps = 17/548 (3%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + ++V    +M++L    +  +Y  L   +    R   A     +M   G E   H +  
Sbjct: 26  LDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTT 85

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++       ++  A+   +++K   +  D+V YN  I+ + +   +D A K F E+K + 
Sbjct: 86  LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQG 145

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           ++P  +SYT+MI       R  +A  +F +M++    P A  Y  ++ G   AG+  +  
Sbjct: 146 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 205

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           K+L  + ER   P   S F  +L    K   ++ A  + + M + + P  +  Y I+I+ 
Sbjct: 206 KLLERLRERGCIPSVVS-FNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS-TYNIIIDM 263

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C     + A ++LD++          ++L     + N M+  LC   +  +A   F   
Sbjct: 264 LCLGGRVEEAYRILDEM--------EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 315

Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            ++G   D V + +LI G  K+G  D A+ + + M   G   +   Y  LI ++   G  
Sbjct: 316 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 375

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            D       +I  G  P  +L  + M+ +F+ G V+    + + +   G   ++   + +
Sbjct: 376 EDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 435

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           +  L   G   E       M Q G   +   +++++    + GK   A ++L+  +   C
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE-MKEKC 494

Query: 583 I-IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           +   +A+Y  ++D L    +   AY +  +   KG   +      LI G  + G   +A 
Sbjct: 495 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 554

Query: 642 -ILSRMIR 648
            IL  M++
Sbjct: 555 LILEEMMK 562



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 108/477 (22%), Positives = 197/477 (41%), Gaps = 74/477 (15%)

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD------------------- 248
           R +++D+A    A M+     P   +YT +I       R +                   
Sbjct: 22  RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 81

Query: 249 ----------------DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
                           DAL + DE+K   ++P+ V Y   +     AG +    K   E+
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM-IRLSIPTEAGHYGILIENFCKAE 351
             + + P D S +  ++ V CK+G L  A ++   M    S+P  A  Y  +I  +  A 
Sbjct: 142 KAQGLKPDDVS-YTSMIWVLCKAGRLGEAEELFAQMEAERSVPC-AYAYNTMIMGYGSAG 199

Query: 352 MYDRAIKLLDKLVEKEII------------LRPQSTLD--------------MEASSYNP 385
            ++ A KLL++L E+  I            L  +  +D                +S+YN 
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNI 259

Query: 386 MIQHLCHNGQTGKAEIFFRQL--MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           +I  LC  G+  +A   +R L  M+   L P  +  N ++    K    + A++I +   
Sbjct: 260 IIDMLCLGGRVEEA---YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           +RG   D   Y  LI+   +KG+  +A    + M++ GH+    ++ S++ + F  GR +
Sbjct: 317 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 376

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LL 558
              +V K ++ +G K +L L+   ++ +   G VE+     + +   G +P+  S   L+
Sbjct: 377 DGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 436

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
             L++ G+      +      +   +D  +Y  V+D    +GK   AY IL ++ EK
Sbjct: 437 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 493



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 179/437 (40%), Gaps = 49/437 (11%)

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           V   R DDA+     M+    +P    YT L+  L +A +     ++LR+M E       
Sbjct: 21  VRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGV 80

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           + +F  L+    + G +  A  ++  +    +  +   Y + I+ F KA   D A K   
Sbjct: 81  H-LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL-MKKGVLDPVAFNNL 420
           +L  K   L+P         SY  MI  LC  G+ G+AE  F Q+  ++ V    A+N +
Sbjct: 140 EL--KAQGLKPDDV------SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 191

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G+   G  + A+++++ +  RG      ++  ++    +K +  +A +  + M +D  
Sbjct: 192 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE 251

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P SS +  +++ L   GRV+ A R++  M    +  NL  V  +++ L     +EEA  
Sbjct: 252 -PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 310

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD---------------------F 576
             +   Q G  P+   + SL+  L +KG+   A +L +                     F
Sbjct: 311 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 370

Query: 577 CLGRD--------------CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
             GR               C  DL      +D +  AG+      I   I   G + D +
Sbjct: 371 IHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 430

Query: 623 SSDKLIAGLNQEGNTKQ 639
           S   LI GL + G  ++
Sbjct: 431 SYSILIHGLTKAGQARE 447



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/344 (21%), Positives = 143/344 (41%), Gaps = 15/344 (4%)

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           N     L     ++  L+ A   +  M RL        Y +LI    +A   +RA++LL 
Sbjct: 10  NQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLR 69

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
           ++ E           ++    +  +++ L   GQ   A     ++ K   L+P  V +N 
Sbjct: 70  QMQE--------VGYEVGVHLFTTLVRALAREGQVADALALVDEV-KGSCLEPDIVLYNV 120

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            I    K GN D A +    +  +G+  D  +Y  +I    + G   +A+     M  + 
Sbjct: 121 CIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 180

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P +  + +++      GR + A ++++ + E+G   ++     IL  L  +  V+EAL
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 240

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
              ++M +    PN   ++ ++ +L   G+   A ++LD         +L +   ++D L
Sbjct: 241 SLFEVMKKDAE-PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 299

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             A K   AY I     ++G   D  +   LI GL ++G   +A
Sbjct: 300 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEA 343


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 220/474 (46%), Gaps = 10/474 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  L++SY K G VQ+ + +   M++ G   +  +Y+ L   + ++G +  AK    +ML
Sbjct: 237 YNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEML 296

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G++ + +TYN +++G+F    L  A+   E+M  +G S  V TYN+ I G  +  +M 
Sbjct: 297 KTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMS 356

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A +  ++M   N+ P V+SY T+I GY  +     A  +FDE++S  + P  VTY  LL
Sbjct: 357 DAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLL 416

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC  G++   Q++  EM+   I P D   +  L+   CK G L+ A +    M+   +
Sbjct: 417 DGLCRQGELEVAQQLKVEMINEGIAP-DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             ++  Y   I    K     RA  L ++++ K     P   +      YN ++  LC  
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG--FPPDLII------YNVVVDGLCKL 527

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G   +A    ++++  GV+ D V + ++I  H + G      EI   M  +G+      Y
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTY 587

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI  +  KG    A      M E G  P    + S++  L +  R+  A      MVE
Sbjct: 588 TVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVE 647

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGK 566
           KG+  N      ++      G+ +EAL     M+  G  P+  +  ++L + GK
Sbjct: 648 KGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/632 (22%), Positives = 282/632 (44%), Gaps = 28/632 (4%)

Query: 22  DHNLVYNVLHGAKNSEH-ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL- 79
           D +L   VL   + S   AL+ FRW E    F         ++EIL +   +  A  ++ 
Sbjct: 80  DPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVME 139

Query: 80  ----------LDMPKKGVQWDE---DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
                     +D+   G    E    + ++LI  Y KK +V++ + +FD M +  +   V
Sbjct: 140 RVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDV 199

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           K+ + + +++  +     A   +  M   GI+PT  TYN +L  +    K++  +    +
Sbjct: 200 KNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSE 259

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M+ RG + + VTYN +ING ++  + ++A+ L  EM +  ++ +  +Y  +I GY     
Sbjct: 260 MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGM 319

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
             +AL + +EM      P   TY + + GLC  G+M +  + L +M+   + P D   + 
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP-DVVSYN 378

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+   C+ G+L  A  +   +  + +      Y  L++  C+    + A +L  +++ +
Sbjct: 379 TLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINE 438

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHS 425
            I          +  +Y  ++   C  G    A+ FF +++ +G+ LD  A+   I G  
Sbjct: 439 GIA--------PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K G+   AF + + M  +G P D   Y  +++   + G   +A   L  M+ DG  P   
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            + S++ +  E+GR++    +   M+ KG+  ++     ++     +G +E A      M
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
            + G +PN   ++SL++ L +  +   A       + +    +  SY  +++     G  
Sbjct: 611 QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
             A S+  +++++G   D  +   L+  L ++
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/413 (21%), Positives = 167/413 (40%), Gaps = 43/413 (10%)

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I  Y      +  L +FD+M    + P+      +L  L D   M +  +V R M E  
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P   + +  LL   CK G +    D+L  M R         Y +LI    K   +++A
Sbjct: 230 IKPTIVT-YNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA 416
             L+ +++        ++ L + A +YNP+I    + G   +A     +++ KG    VA
Sbjct: 289 KGLIGEML--------KTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVA 340

Query: 417 -FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N+ I G  K G    A + +  M    +  D  +Y  LI  Y R G    A    D +
Sbjct: 341 TYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                 P    + ++++ L   G ++ A ++   M+ +G+  ++     +   +L+ G  
Sbjct: 401 RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI-----VTYTILVNGSC 455

Query: 536 EEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           +  +G + +                         A +  D  L     +D  +Y   +  
Sbjct: 456 K--MGSLSM-------------------------AQEFFDEMLHEGLELDSYAYATRIVG 488

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            L  G T  A+S+  +++ KG   D    + ++ GL + GN ++A ++L +M+
Sbjct: 489 ELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMV 541



 Score = 45.4 bits (106), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 3/178 (1%)

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           +M E G  P    + ++++S  + G+VQ    ++  M  +G   N      ++  L  +G
Sbjct: 224 TMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG 283

Query: 534 HVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
             E+A G I  M+++G   S   ++ L+     KG    A+ L +  + +     +A+Y 
Sbjct: 284 EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYN 343

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
             +  L   G+  +A   L  ++    + D  S + LI G  + GN  +A +L   +R
Sbjct: 344 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401



 Score = 39.3 bits (90), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 87/182 (47%), Gaps = 19/182 (10%)

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV----------AKIL 526
           + G   +  +F +++E L ++  +++A  VM+ ++   +   +D++           KIL
Sbjct: 108 QPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKIL 167

Query: 527 EALLM----RGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLG 579
           + L+     +  VE+ L   D M++S   P   N + +L +L +K     AV++    +G
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYR-TMG 226

Query: 580 RDCI-IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
              I   + +Y  +LD+    GK      +L ++  +G   +  + + LI GL+++G  +
Sbjct: 227 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286

Query: 639 QA 640
           QA
Sbjct: 287 QA 288


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 259/557 (46%), Gaps = 19/557 (3%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           AG       T+  +I    R G+L+     L ++ KKG + D   F  L++         
Sbjct: 85  AGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTS 144

Query: 109 ESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE---GIEPTRHTY 164
           +++ I    M +LG    V SY+ L K +    R   A    + M  +   G  P   +Y
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N +L GFF     + A   + +M  RGI  DVVTY+++I    + + MD+A ++   M +
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
             + P  ++Y +++ GY +  +  +A+    +M+S  V+PN VTY++L+  LC  G+  E
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +K+   M +R + P D + +  LL      G L     +L  M+R  I  +   + ILI
Sbjct: 325 ARKIFDSMTKRGLEP-DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             + K E  D+A+ +  K+         Q  L+     Y  +I  LC +G    A ++F 
Sbjct: 384 CAYAKQEKVDQAMLVFSKM--------RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435

Query: 405 QLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           Q++ +G L P  + + +LI G       D A E++  M  RG+  +   +  +I+S+ ++
Sbjct: 436 QMIDEG-LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G   +++   D M+  G  P    + ++++     G++  A++++ SMV  GVK ++   
Sbjct: 495 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 554

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLG 579
             ++        +++AL     M+ SG  PN   ++ +L  L    +T AA +L      
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614

Query: 580 RDCIIDLASYEKVLDAL 596
               ++L++Y  +L  L
Sbjct: 615 SGTQLELSTYNIILHGL 631



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/548 (24%), Positives = 241/548 (43%), Gaps = 38/548 (6%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V N      +S+ A   +  +   G+   D  T+  +I  L +   ++ A  +L  M
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGIL-PDVVTYSSIIAALCKAQAMDKAMEVLNTM 262

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K GV  D   +  ++  Y   G  +E++     M+  GVE +V +Y +L   + + GR 
Sbjct: 263 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRS 322

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A++ F+ M   G+EP   TY  +L G+     L       + M   GI  D   +N +
Sbjct: 323 TEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNIL 382

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  Y + +K+D+A  +F++M++  + P V+ Y T+I         DDA+  F++M    +
Sbjct: 383 ICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGL 442

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSGHLNAA 321
            PN + YT+L+ GLC   K  + ++++ EM++R I    N++F   ++   CK G +  +
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL--NTIFFNSIIDSHCKEGRVIES 500

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE---------------- 365
             +   M+R+ +  +   Y  LI+  C A   D A KLL  +V                 
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560

Query: 366 --------------KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
                         KE++    S +     +YN ++Q L H  +T  A+  +  + K G 
Sbjct: 561 YCRVSRMDDALALFKEMV---SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT 617

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            L+   +N ++ G  K    D A  + + +    +  +   +  +I + L+ G   +AK 
Sbjct: 618 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 677

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
              +   +G  P    +  + E+L E G ++    +  SM E G   +  ++  I+  LL
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737

Query: 531 MRGHVEEA 538
            RG +  A
Sbjct: 738 QRGDITRA 745



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 217/468 (46%), Gaps = 17/468 (3%)

Query: 28  NVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGV 87
           N L     S  A + F  + + GL   D  T+  +++     G L     +L  M + G+
Sbjct: 314 NYLCKNGRSTEARKIFDSMTKRGL-EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
           Q D  +F +LI +Y K+  V +++ +F  M+Q G+  +V  Y  +  ++ + G    A  
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           YF +M+ EG+ P    Y  ++ G     K + A     +M  RGI L+ + +N++I+ + 
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           +  ++ E+EKLF  M    ++P +I+Y T+I G     + D+A ++   M S  VKP+ V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           TY  L+ G C   +M +   + +EMV   + P   +  + L G+   +    AA ++  +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF-HTRRTAAAKELYVS 611

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           + +     E   Y I++   CK  + D A+++   L   +        L +E  ++N MI
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--------LQLETRTFNIMI 663

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             L   G+  +A+  F      G++  V  ++ +     ++G+ +   ++   M   G  
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGH-----SPASSLFRS 489
            D+     ++   L++G+   A T L  MI++ H     S AS L  S
Sbjct: 724 ADSRMLNSIVRKLLQRGDITRAGTYL-FMIDEKHFSLEASTASFLLES 770



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 146/616 (23%), Positives = 259/616 (42%), Gaps = 59/616 (9%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM---KQLGVERSVKSYDALFK 134
           +L  M + G   D   +  L++    +   QE++++  +M   +  G    V SY+ +  
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
              + G    A   +++ML  GI P   TY+ ++     +  ++ A+     M   G+  
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D +TYN++++GY    +  EA     +M+   +EP V++Y++++       R+ +A +IF
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG---- 310
           D M    ++P+  TY  LL G    G +VE+  +L  MV   I P D+ VF  L+     
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP-DHHVFNILICAYAK 388

Query: 311 -------------------------------VQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
                                          V CKSG ++ A    + MI   +      
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI   C  + +D+A +L+ +++++ I L            +N +I   C  G+  ++
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICL--------NTIFFNSIIDSHCKEGRVIES 500

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           E  F  +++ GV  D + +N LI G    G  D A +++  M   GV  D   Y  LI  
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           Y R     DA      M+  G SP    +  +++ LF   R   A  +  S+ + G +  
Sbjct: 561 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 620

Query: 519 LDLVAKILEALLMRGHVEEAL------GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
           L     IL  L      +EAL         DL +++ +   F+ ++  L + G+   A  
Sbjct: 621 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT---FNIMIGALLKCGRMDEAKD 677

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGL 631
           L         + D+ +Y  + + L+  G +L     LF  ME+ G + D +  + ++  L
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQG-SLEELDDLFLSMEENGCSADSRMLNSIVRKL 736

Query: 632 NQEGNTKQADILSRMI 647
            Q G+  +A     MI
Sbjct: 737 LQRGDITRAGTYLFMI 752



 Score = 42.4 bits (98), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 41/196 (20%), Positives = 89/196 (45%), Gaps = 11/196 (5%)

Query: 464 EPADAKTALDSMIEDGH---SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
            PA A +  + M   G    +P    +  ++      GR+      + ++V+KG + +  
Sbjct: 69  SPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAI 128

Query: 521 LVAKILEALLMRGHVEEALGRI-DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
               +L+ L       +A+  +   M + G +P+   +++LL  L ++ ++  A++LL  
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 577 CL---GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                G     D+ SY  VL+     G +  AYS   +++++G + D  +   +IA L +
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248

Query: 634 -EGNTKQADILSRMIR 648
            +   K  ++L+ M++
Sbjct: 249 AQAMDKAMEVLNTMVK 264


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/624 (23%), Positives = 281/624 (45%), Gaps = 35/624 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           ++  F+W      + H  + +  +I+ LG   +      +LL + ++G+ + E +F  ++
Sbjct: 85  SMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIM 144

Query: 99  ESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           + YG+  +  ++ ++   MK +   E + KSY+ +  +++      +A   F +MLS+G+
Sbjct: 145 KYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGV 204

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
            PT +T+ V++    +  +++ A     DM   G   + V Y T+I+  ++  +++EA K
Sbjct: 205 IPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALK 264

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           L  EM      P V ++  +I G   + R  +  ++ D M      PN +TY  L+ GLC
Sbjct: 265 LLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLC 324

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA-ADVLKAMIRLSIPTE 336
             GK+ E Q +L +     +P  ++  F  L+    KSG L+ A A +   MI+     +
Sbjct: 325 RVGKVDEAQVLLNK-----VPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPD 379

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS-------SYNPMIQH 389
              +  LI   CK  +   A+ +++               DM A+       +Y  ++  
Sbjct: 380 VFTFNTLIHGLCKKGLMGSAVDMVN---------------DMSANGCTPNLITYTTLLDG 424

Query: 390 LCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
            C   Q  +A     ++  KG  L+ + +N L+R   K G    A +++  M  +G   D
Sbjct: 425 FCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPD 484

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              +  LI    +     DA      M+ DG    +  + +++ +    G +Q A +++ 
Sbjct: 485 IFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVN 544

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKG 565
            M+ +G   +      +++A    G  E+ALG  D M++   VP+  S   L++ L   G
Sbjct: 545 DMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVG 604

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           K   A++LL   + R    D+ +Y  +++ L   G    A+++  K+  +G   D  + +
Sbjct: 605 KVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYN 664

Query: 626 KLIAGLNQEGNTKQADILSRMIRG 649
            LI    + G    A +L  ++RG
Sbjct: 665 TLICWHCRAGMFDDAYLL--LLRG 686



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 196/418 (46%), Gaps = 25/418 (5%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQES- 110
           F  +  T+  ++  L RVGK++ A+ +L  +P      ++  F +LI  Y K G + E+ 
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTP----NDVHFTILINGYVKSGRLDEAN 364

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             ++D M + G    V +++ L   + ++G    A    N M + G  P   TY  +L G
Sbjct: 365 AFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDG 424

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           F    +LE A     +M ++G  L+++ YN ++    +  K+ +A  +  EM +K  +P 
Sbjct: 425 FCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPD 484

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           + ++ T+I G   V+R +DAL ++ +M    V  N VTY  L+      G + E  K++ 
Sbjct: 485 IFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVN 544

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           +M+ R   P D   +  L+   CK G    A  +   M+R  +        +LI   C+ 
Sbjct: 545 DMLFRGC-PLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRV 603

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
                A++LL  ++ +   L P      +  +YN +I  LC  G   +A   F +L  +G
Sbjct: 604 GKVCNALELLRDMIHRG--LAP------DVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV-----PRDADAYICLIESYLRK 462
           +  D + +N LI  H + G  D A+    ++  RGV     P D   YI L+ +++++
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAY----LLLLRGVENAFIPNDVTWYI-LVSNFIKE 708


>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 230/489 (47%), Gaps = 41/489 (8%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFF--RWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           Q  ++LV  ++   K+   A+  F     E    F HD ET   +I  L  V +   A  
Sbjct: 12  QITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEG 71

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  M ++     ED+F  +   YG+     +++++F  M+   +  + K+Y  +  +++
Sbjct: 72  MLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILV 131

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK-LETAIRFFEDMKSRGISLDV 196
                  A  ++ +M   GI  +  + N+++     + + +++A+R F++M +RG   D 
Sbjct: 132 EENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDS 191

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
            TY T+ING  R   + EA++LF EM++K    +V++YT++I G       D+A+ + +E
Sbjct: 192 YTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEE 251

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           MK  D++PN  TY++L+ GLC  G   +  ++L  M +++  P +   +  L+   CK  
Sbjct: 252 MKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLP-NMVTYSTLINGLCKER 310

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP-QST 375
            L  A ++L  M    +   AG YG +I   C A  Y  A   +D++V   I   P +++
Sbjct: 311 KLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGI--SPNRAS 368

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFE 435
             +    +N ++Q LC+N                                   +P  AF+
Sbjct: 369 WSLHVRMHNMVVQGLCNN----------------------------------VDPPRAFQ 394

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   M  R +  + D + CL++ + ++G+   A   L+ M+ DG  P   ++  V+  L+
Sbjct: 395 LYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLW 454

Query: 496 EDGRVQTAS 504
           +  +V+ A+
Sbjct: 455 DRKKVREAT 463



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 46/365 (12%)

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G   D  T+  +I+      +   AE +   MK++    T   + ++ +GY  V R  DA
Sbjct: 45  GFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDA 104

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           +R+F +M+ F ++P    Y                                    + +L 
Sbjct: 105 IRVFHKMEGFQLRPTQKAY------------------------------------LTILD 128

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK-AEMYDRAIKLLDKLVEKEII 369
           +  +  H+  A    + M  L IP+      ILI+  CK  E  D A+++  ++      
Sbjct: 129 ILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEM------ 182

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
             P      ++ +Y  +I  LC  G   +A+  F+++ +KG     V + +LI G  +  
Sbjct: 183 --PNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSN 240

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           N D A  +++ M R  +  +   Y  L++   + G  + A   L+ M +  H P    + 
Sbjct: 241 NLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYS 300

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           +++  L ++ +++ A  ++  M  +G+K N  L  KI+  L   G  +EA   ID M+  
Sbjct: 301 TLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLG 360

Query: 549 GSVPN 553
           G  PN
Sbjct: 361 GISPN 365



 Score = 40.8 bits (94), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 5/213 (2%)

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   D + +  +I   +   +   A+  L+ M ++       +F S+        R   A
Sbjct: 45  GFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDA 104

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSV 560
            RV   M    ++        IL+ L+   HV+ A+G    M + G   SV + + L+  
Sbjct: 105 IRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKA 164

Query: 561 LSEKGKTI-AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           L +  +T+ +A+++      R C  D  +Y  +++ L   G    A  +  ++ +KG   
Sbjct: 165 LCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSA 224

Query: 620 DWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEM 651
              +   LI GL Q  N  +A  +L  M R ++
Sbjct: 225 SVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDI 257


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 149/614 (24%), Positives = 274/614 (44%), Gaps = 35/614 (5%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   MI    R GKL  A     +   KGV+ D   + ++IE+  KK     ++ + 
Sbjct: 223 DCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLL 282

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  G       +  +  + +++G+ + A +   +MLS G          ++ G+   
Sbjct: 283 REMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQ 342

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L++A+  F+ M   GI  + VTY  +I    +   MD+A +++ +MK K+I PTV + 
Sbjct: 343 GDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNV 402

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            ++I+GY+     ++A ++FDE  +  +  N  TY +LL  LC  GKM E   +  +MV 
Sbjct: 403 NSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVR 461

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + + P   S    +LG  C+ G +++A  V   M+   +      Y +L++ + K    +
Sbjct: 462 KGVRPSVVSYNNMILG-HCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTE 520

Query: 355 RAIKLLDKLVEKEI-------------ILRPQSTLDME--------------ASSYNPMI 387
            A  L D++  + I             + +   T + +                +YN +I
Sbjct: 521 YAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCII 580

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
                 G    A   + ++ K GV   V  + NLI G  K  N D A +++  M  +G+ 
Sbjct: 581 DGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIE 640

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D   Y  LI+ + RKG+  +A   L  + E G SP   ++ S++    +   ++ A  +
Sbjct: 641 LDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHL 700

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
            K M+ +G+  +L +   ++  LL  G +  A      M+  G +P+   +  L+  L  
Sbjct: 701 HKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCN 760

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLAS-YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           KG+   A K+L+  + R C+      Y  ++      G    A+ +  ++++KG V D  
Sbjct: 761 KGQLENAQKILED-MDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDT 819

Query: 623 SSDKLIAGLNQEGN 636
           + D L+ G  ++GN
Sbjct: 820 TYDILVNGKVKDGN 833



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 254/563 (45%), Gaps = 15/563 (2%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D  +F  L+ SY K   + ++V  F+ + +  +   +   +     +++      A+  +
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
           NKM S+G++    T +VM+       KLE A  +F + K++G+ LD   Y+ +I    + 
Sbjct: 213 NKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKK 272

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
                A  L  EM++K   P  + +T +I   +   +  +A+++  EM S     N V  
Sbjct: 273 PDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVA 332

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           T L+ G C  G +    ++  +M E  I P +N  +  ++   CK+G+++ A ++   M 
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICP-NNVTYAVIIEWCCKNGNMDKAYEIYNQMK 391

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
              I     +   LI  + KA   + A KL D+ V   I             +YN ++  
Sbjct: 392 NKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI---------ANVFTYNSLLSW 442

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC  G+  +A   + ++++KGV    V++NN+I GH ++G+ DSA  +   M  +G+  +
Sbjct: 443 LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPN 502

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  L++ Y +KG+   A    D M  +  +P+      ++  L + GR   +   +K
Sbjct: 503 LITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLK 562

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
            +V++G          I++  +  G V  AL     M + G  PN   + +L++   +  
Sbjct: 563 KLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSN 622

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
               A+K++D    +   +D+  Y  ++D     G  +NA  +L ++ E G   +     
Sbjct: 623 NMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYS 682

Query: 626 KLIAGLNQEGNTKQA-DILSRMI 647
            +I+G  +  N + A  +  RMI
Sbjct: 683 SMISGFRKLQNMEAALHLHKRMI 705



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 216/464 (46%), Gaps = 15/464 (3%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           ++A+    Q K + + P  F+ N +      A++ E A + F      G+ N    T+  
Sbjct: 381 DKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIAN--VFTYNS 438

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L + GK++ A  I   M +KGV+     +  +I  + ++G +  +  +F  M + G
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ ++ +Y  L     ++G    A   +++M  E I P+  T N+++ G   + +   + 
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQ 558

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              + +   G     +TYN +I+G+ +   ++ A  ++ EM +  + P V +YT +I G+
Sbjct: 559 DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGF 618

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 D AL++ DEMK+  ++ +   Y AL+ G C  G MV   ++L E+ E  + P +
Sbjct: 619 CKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSP-N 677

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             V+  ++    K  ++ AA  + K MI   IP +   Y  LI    K      A +L  
Sbjct: 678 KVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYA 737

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NN 419
           +++ K I+         +  +Y+ +I  LC+ GQ   A+     + +K  + P  F  N 
Sbjct: 738 EMLAKGIM--------PDLITYSVLIHGLCNKGQLENAQKILEDMDRK-CMTPTVFIYNT 788

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           LI GH KEGN   AF +   M  +G+  D   Y  L+   ++ G
Sbjct: 789 LITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 148/302 (49%), Gaps = 2/302 (0%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F  N++ N L  A  +  +    + + + G F     T+  +I+   + G +N A  +  
Sbjct: 539 FTCNIIINGLCKAGRTSESQDRLKKLVQEG-FIPTCMTYNCIIDGFVKEGSVNSALAVYT 597

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M K GV  +   +  LI  + K   +  ++K+ D MK  G+E  V  Y AL     R+G
Sbjct: 598 EMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKG 657

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
             + A +  +++   G+ P +  Y+ M+ GF     +E A+   + M + GI  D+  Y 
Sbjct: 658 DMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYT 717

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+I+G  +  K+  A +L+AEM  K I P +I+Y+ +I G     + ++A +I ++M   
Sbjct: 718 TLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRK 777

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P    Y  L+ G    G + E  ++  EM+++ + P D++ +  L+  + K G+L +
Sbjct: 778 CMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVP-DDTTYDILVNGKVKDGNLFS 836

Query: 321 AA 322
            A
Sbjct: 837 GA 838



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 148/332 (44%), Gaps = 14/332 (4%)

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
           A ++++  RL   +++  +  L+ ++ K +  + A+   + L+EK+I+  P  T+     
Sbjct: 139 ARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIV--PCLTV----- 191

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
             N  +  L  N    +A   + ++  KGV  D    + +IR   +EG  + A    +  
Sbjct: 192 -MNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREA 250

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +GV  DA AY  +IE+  +K +   A   L  M + G  P   +F  V+    + G++
Sbjct: 251 KNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKM 310

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A +V   M+  G   N+ +   +++    +G ++ AL   D M ++G  PN   +  +
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVI 370

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +    + G    A ++ +    +D    + +   ++   L A ++    S LF      G
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKA-RSPEEASKLFDEAVACG 429

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           + +  + + L++ L +EG   +A  I  +M+R
Sbjct: 430 IANVFTYNSLLSWLCKEGKMSEACSIWEKMVR 461



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 155/380 (40%), Gaps = 30/380 (7%)

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D+ VF  LL    K+  +N A D   ++I   I        I +    K  M   A  + 
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212

Query: 361 DKLVEK---------EIILRP------------------QSTLDMEASSYNPMIQHLCHN 393
           +K+  K          +++R                      ++++A +Y+ +I+ +C  
Sbjct: 213 NKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKK 272

Query: 394 GQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
             +  A    R++  KG V   V F  +I    K+G    A ++   M   G P +    
Sbjct: 273 PDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVA 332

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L++ Y ++G+   A    D M E+G  P +  +  ++E   ++G +  A  +   M  
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--SVPNFDSLLSVLSEKGKTIAA 570
           K +   +  V  ++   L     EEA    D  +  G  +V  ++SLLS L ++GK   A
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEA 452

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             + +  + +     + SY  ++      G   +A  +  +++EKG   +  +   L+ G
Sbjct: 453 CSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDG 512

Query: 631 LNQEGNTKQADILSRMIRGE 650
             ++G+T+ A  L   +RGE
Sbjct: 513 YFKKGDTEYAFGLYDRMRGE 532


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 152/631 (24%), Positives = 281/631 (44%), Gaps = 31/631 (4%)

Query: 44  RWVERAGLFNHDRETHL--KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           R V+RA       + +L  K+I  L R G+ + A  +L    + G   D   +  L+  Y
Sbjct: 64  RLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGY 123

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
            + G +  + ++   M    V     +Y  + + +  RGR   A    + ML  G +P+ 
Sbjct: 124 CRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 180

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
            TY V+L     S     A+   ++M+++G + ++VTYN +ING  R  ++D+A +    
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 240

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           +     +P  +SYTT++KG  A +R +D   +F EM   +  PN VT+  L+   C  G 
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           +    +VL +M   +    + ++   ++   CK G ++ A   L  M       +   Y 
Sbjct: 301 VERAIQVLEQM-SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 359

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            +++  C+AE ++ A +LL ++V K     P + +     ++N  I  LC  G   +A +
Sbjct: 360 TVLKGLCRAERWEDAKELLKEMVRKNC---PPNEV-----TFNTFICILCQKGLIEQATM 411

Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
              Q+ + G  ++ V +N L+ G   +G  DSA E+   M  +    +   Y  L+    
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGLC 468

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
                  A   L  M++   +P    F  ++    + G +  A  +++ M+E G   NL 
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL--- 574
               +L+ +    + EEAL  +  ++ +G  P+   + S++ VLS + +   A+K+    
Sbjct: 529 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 588

Query: 575 -DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
            D  +    +I    Y K+L AL     T  A      ++  G + +  +   LI GL  
Sbjct: 589 QDLGMRPKAVI----YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLAN 644

Query: 634 EGNTKQA-DILSRMI-RGEMSRGSQKEKKQK 662
           E   K+  D+L  +  RG +++   +E + K
Sbjct: 645 EDFLKETRDLLRELCSRGVLNKNLLEEWRPK 675



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 228/517 (44%), Gaps = 13/517 (2%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S    +A  + ++ R     A R  ++  S G  P  +    ++       +   A R  
Sbjct: 42  SPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVL 101

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
              +  G ++DV  YNT++ GY R+ ++D A +L A M    + P   +YT +I+G    
Sbjct: 102 RAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDR 158

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            R  +AL + D+M     +P+ VTYT LL  +C +    +  +VL EM  +   P +   
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP-NIVT 217

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  ++   C+ G ++ A + L  +       +   Y  +++  C A+ ++   +L  +++
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMM 277

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL-IRG 423
           EK  +   + T DM       +++  C  G   +A     Q+   G        N+ I  
Sbjct: 278 EKNCMPN-EVTFDM-------LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT 329

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K+G  D AF+ +  MG  G   D  +Y  +++   R     DAK  L  M+     P 
Sbjct: 330 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              F + +  L + G ++ A+ +++ M E G + N+     ++    ++G V+ AL    
Sbjct: 390 EVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFY 449

Query: 544 LMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
            M    +   + +LL+ L    +  AA +LL   L +DC  ++ ++  ++      G   
Sbjct: 450 SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            A  ++ ++ME G   +  + + L+ G+ ++ N+++A
Sbjct: 510 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEA 546



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 1/182 (0%)

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
           A+A   +D     G +P   L   ++ +L   GR   A+RV+++    G   ++     +
Sbjct: 60  AEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTL 119

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           +      G ++ A   I  M  +     +  ++  L ++G+   A+ LLD  L R C   
Sbjct: 120 VAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPS 179

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
           + +Y  +L+A+  +     A  +L ++  KG   +  + + +I G+ +EG    A + L+
Sbjct: 180 VVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLN 239

Query: 645 RM 646
           R+
Sbjct: 240 RL 241


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 197/410 (48%), Gaps = 9/410 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R G +  A  IL +M  KG   DE  +  L+  Y K+G   +++ I   M + G
Sbjct: 86  IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 145

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  SV +Y AL   + +      A  +F++M   G+ P   TY  ++ GF     L  A 
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 205

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R   +M   G S  VVTYN  I+G+   ++M+EA  +  EM EK + P V+SY+T+I G+
Sbjct: 206 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 D A ++  EM    V P+AVTY++L+ GLC+  ++ E   + +EM++  +PP D
Sbjct: 266 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP-D 324

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   C  G LN A  +   MI      +A  Y +LI    K      A +LL 
Sbjct: 325 EFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLF 384

Query: 362 KLVEKEIILRP-------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
           KL+ +E +          ++  ++E  S   +I+  C  G   +A+  F  ++++     
Sbjct: 385 KLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPG 444

Query: 415 VA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            A +N +I GH + GN   AF + K M   G        I LI++  ++G
Sbjct: 445 EAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 494



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 245/518 (47%), Gaps = 31/518 (5%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + +N++          +  L  F  +ER G    +  T+  +I+   ++G+++ A  +L 
Sbjct: 11  YTYNILIRGFCSVGELQKGLGCFGEMERNGCL-PNVVTYNTLIDAYCKMGRIDEAFGLLK 69

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M  KG+Q +   + V+I    ++G ++E+ +I + M   G      +Y+ L     + G
Sbjct: 70  SMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG 129

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
            +  A     +M+  G+ P+  TY  ++     +  L  A+ FF+ M+ RG+  +  TY 
Sbjct: 130 NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT 189

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+I+G++R   ++EA ++  EM E    P+V++Y   I G+  +ER ++AL +  EM   
Sbjct: 190 TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 249

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+ V+Y+ ++ G C  G++    ++ +EMVE+ + P D   +  L+   C+   L  
Sbjct: 250 GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSP-DAVTYSSLIQGLCEMRRLTE 308

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A D+ + M+ + +P +   Y  LI  +C     ++A+ L D+++ K  +         +A
Sbjct: 309 ACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL--------PDA 360

Query: 381 SSYNPMIQHLCHNGQTGKAE-IFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y+ +I  L    +T +A+ + F+ + ++ V   V ++ LI   S     +  F+ V  
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS-----NIEFKSV-- 413

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
                        + LI+ +  KG   +A    +SM+E  H P  +++  ++      G 
Sbjct: 414 -------------VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGN 460

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           +  A  + K M+  G   +   V  +++AL   G  EE
Sbjct: 461 LPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 498



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 234/519 (45%), Gaps = 29/519 (5%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +LI  +   G +Q+ +  F  M++ G   +V +Y+ L     + GR   A      M 
Sbjct: 13  YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 72

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S+G++P   +YNV++ G      ++ A    E+M  +G + D VTYNT++NGY +     
Sbjct: 73  SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 132

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  + AEM    + P+V++YT +I         + A+  FD+M+   ++PN  TYT L+
Sbjct: 133 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 192

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G    G + E  ++L EM E    P     +   +   C    +  A  V++ M+   +
Sbjct: 193 DGFSRQGLLNEAYRILNEMTESGFSPSV-VTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y  +I  FC+    DRA ++  ++VEK +          +A +Y+ +IQ LC  
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV--------SPDAVTYSSLIQGLCEM 303

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A    ++++  G+  D   +  LI  +  EG+ + A  +   M  +G   DA  Y
Sbjct: 304 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 363

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE---------------D 497
             LI    ++    +AK  L  +I +   P+   + +++E+                   
Sbjct: 364 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMK 423

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G +  A RV +SMVE+  K    +   I+      G++ +A      M+ SG VP+    
Sbjct: 424 GLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTV 483

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
            +L+  L ++G      +++   L R C ++ A   KVL
Sbjct: 484 ITLIKALFKEGMNEEMSEVIGDTL-RSCRLNEAELAKVL 521



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 193/427 (45%), Gaps = 48/427 (11%)

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M+   + P  +TYN+++ GF    +L+  +  F +M+  G   +VVTYNT+I+ Y +  +
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           +DEA  L   M  K ++P +ISY  +I G        +A  I +EM      P+ VTY  
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM-IR 330
           LL G C  G   +   +  EMV   + P     +  L+   CK+ +LN A +    M IR
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSV-VTYTALINSMCKARNLNRAMEFFDQMRIR 179

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
              P E   Y  LI+ F +  + + A ++L+++ E               S ++P +   
Sbjct: 180 GLRPNER-TYTTLIDGFSRQGLLNEAYRILNEMTE---------------SGFSPSV--- 220

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
                                   V +N  I GH      + A  +V+ M  +G+  D  
Sbjct: 221 ------------------------VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVV 256

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           +Y  +I  + RKGE   A      M+E G SP +  + S+++ L E  R+  A  + + M
Sbjct: 257 SYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM 316

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
           ++ G+  +      ++ A  + G + +AL   D M+  G +P+   +  L++ L+++ +T
Sbjct: 317 LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 376

Query: 568 IAAVKLL 574
             A +LL
Sbjct: 377 REAKRLL 383



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 185/402 (46%), Gaps = 25/402 (6%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T+  ++    + G  + A  I  +M + GV      +  LI S  K   +  ++
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 170

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           + FD M+  G+  + ++Y  L     R+G    A R  N+M   G  P+  TYN  + G 
Sbjct: 171 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 230

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
            +  ++E A+   ++M  +G++ DVV+Y+T+I+G+ R  ++D A ++  EM EK + P  
Sbjct: 231 CVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDA 290

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++Y+++I+G   + R  +A  +  EM    + P+  TYT L+   C  G + +   +  E
Sbjct: 291 VTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE 350

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN----- 346
           M+ +   P   +  + + G+  ++    A   + K +   S+P++   Y  LIEN     
Sbjct: 351 MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV-TYDTLIENCSNIE 409

Query: 347 ----------FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
                     FC   +   A ++ + +VE+    +P   +      YN +I   C  G  
Sbjct: 410 FKSVVALIKGFCMKGLMHEADRVFESMVERN--HKPGEAV------YNVIIHGHCRGGNL 461

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIV 437
            KA   +++++  G V   V    LI+   KEG  +   E++
Sbjct: 462 PKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 503


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 263/598 (43%), Gaps = 31/598 (5%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           +  KG+         L+ S  K   V+ S ++FDIM   GV   V  +  +       GR
Sbjct: 153 LANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGR 212

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F KM   G+ P   TYN ++ G   + +L+ A +F E M+   +   +VTY  
Sbjct: 213 VDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGV 272

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +ING  + ++ DEA  +  EM ++   P  + Y T+I GY  +     AL+I D+M S  
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNG 332

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + PN+VT  +L+ G C + +M   + +L EM+       +   F  ++   C     ++A
Sbjct: 333 ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG-GVINQGTFTSVIHRLCLKCRFDSA 391

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
              +  M+  +     G   +L+   C+      AI+L  +L+EK       ++      
Sbjct: 392 LLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTS------ 445

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
             N +I  LC  G   +A    ++++++G VLD +++N LI    KEG  +  F++ + M
Sbjct: 446 --NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEM 503

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            RRG+  D   Y  L+      G+  +A        ++G+ P +  +  +++   +  RV
Sbjct: 504 VRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRV 563

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP----NFDS 556
           +   ++ + MV   +++N  +   ++ A    G++ EA  R+   M+S  +P     + S
Sbjct: 564 EEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAF-RLRDDMRSRGIPQTSATYSS 622

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL------- 609
           L+  LS  G   +A +LLD         ++  Y  ++      G+     SIL       
Sbjct: 623 LIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINN 682

Query: 610 -------FKIMEKGG--VTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKE 658
                  + IM  G   + + K++ KL+  + Q+G    A   + +  G    G  +E
Sbjct: 683 VHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEE 740



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/605 (20%), Positives = 274/605 (45%), Gaps = 14/605 (2%)

Query: 40  LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIE 99
            + F  +   GLF   +  +  ++  L +  ++  +  +   M   GV  D  +F  ++ 
Sbjct: 147 FELFSLLANKGLFPSLKTCNF-LLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205

Query: 100 SYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
           ++   G V +++++F  M+++GV  +V +Y+ +   + + GR   A ++  KM  E ++P
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
           +  TY V++ G     + + A    ++M  RG + + V YNT+I+GY R   +  A ++ 
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIR 325

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
            +M    I P  ++  ++I+GY    + + A  + +EM +     N  T+T+++  LC  
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
            +       + EM+ R   P D  + + + G+ C++G  + A ++   ++          
Sbjct: 386 CRFDSALLFIMEMLLRNFKPNDGLLTLLVSGL-CQNGKQSEAIELWYRLLEKGFAANTVT 444

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
              LI   C+A   + A KLL +++E+ ++L        ++ SYN +I   C  G+  + 
Sbjct: 445 SNALIHGLCEAGSKEEAAKLLKEMLERGLVL--------DSISYNTLILACCKEGKVEEG 496

Query: 400 EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                +++++G+  D   +N L+ G    G  + A  +     + G   DA  Y  +I+ 
Sbjct: 497 FKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDG 556

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           Y +     + +     M+       + ++ +++ +  E+G ++ A R+   M  +G+ + 
Sbjct: 557 YCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQT 616

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
               + ++  L   G V+ A   +D M + G  PN   + +L+    + G+      +L 
Sbjct: 617 SATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQ 676

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
                +   +  +Y  +++     G    A  +L ++ +KG V D  + + L  G  +EG
Sbjct: 677 EMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEG 736

Query: 636 NTKQA 640
             ++A
Sbjct: 737 KMEEA 741



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 137/572 (23%), Positives = 249/572 (43%), Gaps = 46/572 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+      G+++ A  +   M K GV  +   +  +I    K G + E+ +  + M++  
Sbjct: 203 MVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER 262

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V+ S+ +Y  L   +++  R+  A     +M   G  P    YN ++ G+     + TA+
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTAL 322

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +  +DM S GIS + VT N++I GY +  +M+ AE L  EM          ++T++I   
Sbjct: 323 QIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRL 382

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R D AL    EM   + KPN    T L+ GLC  GK  E  ++   ++E+      
Sbjct: 383 CLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANT 442

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +    + G+ C++G    AA +LK M+   +  ++  Y  LI   CK    +   KL +
Sbjct: 443 VTSNALIHGL-CEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKE 501

Query: 362 KLVEKEIILRPQ-STLDM----------------------------EASSYNPMIQHLCH 392
           ++V + I  +P   T +M                            +A +Y  MI   C 
Sbjct: 502 EMVRRGI--QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCK 559

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  + E  F++++   +  + V +  LIR + + GN   AF +   M  RG+P+ +  
Sbjct: 560 ANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSAT 619

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI      G    A   LD M ++G SP    + +++    + G++     +++ M 
Sbjct: 620 YSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMS 679

Query: 512 EKGVKENLDLVAKILEALLMRGH-----VEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
              V  N     KI   +++ GH     ++ A   ++ M Q G VP+   +++L +   +
Sbjct: 680 INNVHPN-----KITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCK 734

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           +GK   A+K+ D        +D  +Y  ++D 
Sbjct: 735 EGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 167/337 (49%), Gaps = 3/337 (0%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           LV  +    K SE    ++R +E+   F  +  T   +I  L   G    A  +L +M +
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKG--FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLE 470

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +G+  D   +  LI +  K+G V+E  K+ + M + G++  + +Y+ L   +   G+   
Sbjct: 471 RGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEE 530

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   +++    G  P  +TY +M+ G+  + ++E   + F++M +  I  + V Y T+I 
Sbjct: 531 AGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIR 590

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            Y     M EA +L  +M+ + I  T  +Y+++I G   +   D A ++ DEM+   + P
Sbjct: 591 AYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP 650

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N V YTAL+ G C  G+M +V  +L+EM    + P +   +  ++   CK G++ AAA +
Sbjct: 651 NVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHP-NKITYTIMINGHCKLGNMKAAAKL 709

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           L  M +  I  +A  Y  L   FCK    + A+K+ D
Sbjct: 710 LNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCD 746



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 196/429 (45%), Gaps = 18/429 (4%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           +++EH L+    +   G+ N    T   +I  L    + + A   +++M  +  + ++ +
Sbjct: 354 EHAEHLLE--EMLTGGGVINQG--TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGL 409

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
             +L+    + G   E+++++  + + G   +  + +AL   +   G    A +   +ML
Sbjct: 410 LTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEML 469

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+     +YN ++       K+E   +  E+M  RGI  D+ TYN +++G     K++
Sbjct: 470 ERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIE 529

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  L+ E K+    P   +Y  MI GY    R ++  ++F EM +  ++ NAV Y  L+
Sbjct: 530 EAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI 589

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
              C+ G M E  ++  +M  R I P+ ++ +  L+      G +++A  +L  M +  +
Sbjct: 590 RAYCENGNMREAFRLRDDMRSRGI-PQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGL 648

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS--SYNPMIQHLC 391
                 Y  LI  +CK          L ++ + + IL+  S  ++  +  +Y  MI   C
Sbjct: 649 SPNVVCYTALIGGYCK----------LGQMHKVDSILQEMSINNVHPNKITYTIMINGHC 698

Query: 392 HNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G    A     ++ +KG++ D V +N L  G  KEG  + A ++  +M   G+  D  
Sbjct: 699 KLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDI 758

Query: 451 AYICLIESY 459
            Y  LI+ +
Sbjct: 759 TYTTLIDGW 767



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 76/151 (50%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L  +G ++ A  +L +M K+G+  +   +  LI  Y K G + +   I   M
Sbjct: 619 TYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEM 678

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
               V  +  +Y  +     + G    A +  N+M  +GI P   TYN +  GF    K+
Sbjct: 679 SINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKM 738

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           E A++  + M + GISLD +TY T+I+G+++
Sbjct: 739 EEALKVCDLMSTGGISLDDITYTTLIDGWHK 769


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 208/434 (47%), Gaps = 13/434 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K  +  D   + +LI    K    Q+++ +FD M   G+  +   Y  +   + +  +
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A+R F+KM + G      TYNV+L GF  S  L+ A    + +   G  L V+ Y  
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +ING  R ++ +EA   + +M  +NI+P V+ YT MI+G     R  +AL +  EM    
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           ++P+ + Y AL+ G CD G + E + +  E+ +    P +++  + + G+ CK+G +N A
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGM-CKNGLINKA 427

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM--- 378
             + K M +L        +  LI   CKA   + A +LL    + EI+ +P   L +   
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA-RLL--FYQMEIVRKPSLFLRLSQG 484

Query: 379 -----EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
                + +S   M++ LC +G   KA     QL+  GVL D   +N LI G  K GN + 
Sbjct: 485 TDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNING 544

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           AF++ K M  +G   D+  Y  LI+   R G   DA    + M++ G  P SS ++++M 
Sbjct: 545 AFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMT 604

Query: 493 SLFEDGRVQTASRV 506
               +  +  A  V
Sbjct: 605 WSCRENNISLALSV 618



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 201/457 (43%), Gaps = 35/457 (7%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L +  K+  A+ +   M   G   D   + VL+  + K G + ++  +  ++ + G    
Sbjct: 243 LCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILG 302

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V  Y  L   + R  RY  A  ++ KML E I+P    Y +M+ G     ++  A+    
Sbjct: 303 VIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLG 362

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M  RG+  D + YN +I G+     +DEAE L  E+ + +  P   +Y+ +I G     
Sbjct: 363 EMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNG 422

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             + A  IF EM+     P+ VT+ +L+ GLC A ++ E + +  +M     P    S+F
Sbjct: 423 LINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKP----SLF 478

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
           ++L      S   +   D+                 +++E  C++ M  +A KLL +LV+
Sbjct: 479 LRL------SQGTDKVFDI-------------ASLQVMMERLCESGMILKAYKLLMQLVD 519

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
             ++         +  +YN +I   C  G    A   F+++  KG + D V +  LI G 
Sbjct: 520 SGVL--------PDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGL 571

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            + G  + A EI + M ++G   ++  Y  ++    R+   + A +     + D      
Sbjct: 572 YRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWED 631

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
              R V ES F++  +QTA R +  M  K   +N DL
Sbjct: 632 EKVRVVAES-FDNEELQTAIRRLLEMDIKS--KNFDL 665



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 119/540 (22%), Positives = 240/540 (44%), Gaps = 40/540 (7%)

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
           R+V+  D +   +++   + +  +   ++ +  I+ +   ++V++  +  +   E A+  
Sbjct: 93  RTVQ--DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVES 150

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  M+      D+  +N +++   R +    A  ++ +M + N+ P V++Y  +I G   
Sbjct: 151 FSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCK 210

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             +  DAL +FDEM    + PN + Y+ +L GLC A K+ + Q++  +M       +D  
Sbjct: 211 TCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGC-NRDLI 269

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH------YGILIENFCKAEMYDRAI 357
            +  LL   CKSG+L+ A  +L+ +      T+ GH      YG LI    +A  Y+ A 
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQLL------TKDGHILGVIGYGCLINGLFRARRYEEAH 323

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
               K++ + I  +P   L      Y  MI+ L   G+  +A     ++ ++G+  D + 
Sbjct: 324 MWYQKMLRENI--KPDVML------YTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTIC 375

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N LI+G    G  D A  +   + +     +   Y  LI    + G    A+     M 
Sbjct: 376 YNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEME 435

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM-----------VEKGVKENLDLVA-- 523
           + G  P+   F S++  L +  R++ A  +   M           + +G  +  D+ +  
Sbjct: 436 KLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQ 495

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            ++E L   G + +A   +  ++ SG +P+   ++ L++   + G    A KL      +
Sbjct: 496 VMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLK 555

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             + D  +Y  ++D L  AG+  +A  I  ++++KG V +  +   ++    +E N   A
Sbjct: 556 GHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLA 615



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 115/279 (41%), Gaps = 35/279 (12%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+E L   G +  A  +L+ +   GV  D   + +LI  + K G +  + K+F  M+  G
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY-NVMLWGF---FLSLKL 177
                 +Y  L   + R GR   A   F +M+ +G  P   TY  +M W      +SL L
Sbjct: 557 HMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616

Query: 178 ETAIRF------FEDMKSRGI--SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
              +++      +ED K R +  S D     T I    R  +MD        +K KN + 
Sbjct: 617 SVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAI---RRLLEMD--------IKSKNFD- 664

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            +  YT  + G V  +R  +A  IF  +K F +  ++ +   L+  LC    +     V 
Sbjct: 665 -LAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVF 723

Query: 290 REMVE---RYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
              +E   R +PP  N +   LL       HL+   D L
Sbjct: 724 LFTLERGFRLMPPICNQLLCNLL-------HLDRKDDAL 755


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 155/659 (23%), Positives = 285/659 (43%), Gaps = 68/659 (10%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I    R+G+L H       + K G + +  +   L++       + E++ I 
Sbjct: 93  DPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDIL 152

Query: 115 -DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML-SEG--IEPTRHTYNVMLWG 170
              M +LG    V SY+ L K      R   A    + M  S+G    P   +Y +++ G
Sbjct: 153 VKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVING 212

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           FF   +++ A   F +M  RGI  +VVTY T+I+G  + + +D AE +F +M +K ++P 
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
             +Y  +I GY+++ +  + +R+ +EM +  +KP+  TY +LL  LC+ G+  E + +  
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFD 332

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            M+ + I P + +++  L+      G L+   D+L  M+   +  +   + I+   + K 
Sbjct: 333 SMIRKGIKP-NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
            M D A+ + +K+         Q  L  +  +Y  +I  LC  G+   A + F Q+M +G
Sbjct: 392 AMIDEAMHIFNKM--------KQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEG 443

Query: 411 VLDPV-AFNNLIRG--------HSKEG---------NPDSAF------------------ 434
           V   +  FN+L+ G         +KE           PD  F                  
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ 503

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            ++ +M R G      +Y  LI  +   G   +A  +LD M+  G  P    + +++   
Sbjct: 504 RLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGY 563

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
              GR+  A  V + M+  G+   +   + IL  L       EA      M+ SG   N 
Sbjct: 564 CRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNI 623

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++ +L+ LS+      A KL      +D  +++ ++  ++ AL  +G+  +A  +   
Sbjct: 624 WIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFAT 683

Query: 612 IMEKGGVTD----------------WKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           I   G V D                 +  D L + + + G T  + +L+ ++R  + RG
Sbjct: 684 ISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRG 742



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 189/405 (46%), Gaps = 29/405 (7%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L+    +L  M + G+  D  +F ++  +Y KK ++ E++ IF+ MKQ G+   V +Y
Sbjct: 357 GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNY 416

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            AL   + + GR   A   FN+M++EG+ P    +N +++G     K E A  F+ +M +
Sbjct: 417 GALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +GI  DVV +NT++       ++ +A++L   M+     P VISYTT+I G+  V R D+
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDE 536

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A +  D M S  +KP+  TY  LL G C AG++ +   V REM+   I P   +    L 
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILH 596

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
           G+   +   + A ++   MI          Y I++    K    D A KL   L  K+  
Sbjct: 597 GLF-TTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKD-- 653

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-------------- 415
                   +E +++N MI  L  +G+   A   F  +   G++  V              
Sbjct: 654 ------FQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707

Query: 416 ---AFNNLIRGHSKEG-NPDSAF--EIVKIMGRRGVPRDADAYIC 454
               F++L     K G  P+S     +V+ +  RG    A AY+C
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLC 752



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 245/564 (43%), Gaps = 31/564 (5%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK-- 127
           G L HAR      P   + ++  +   +    G++    ES  +  +  ++  E ++K  
Sbjct: 39  GLLTHAR------PASVIAFNH-LLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91

Query: 128 ----SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
               +Y  L     R GR       F  +L  G        N +L G   + +L  A+  
Sbjct: 92  PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151

Query: 184 F-EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF---AEMKEKNIEPTVISYTTMIK 239
             + M   G + DVV+YNT++ G+   K+ +EA +L    A+ + ++  P V+SY  +I 
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G+    + D A  +F EM    ++PN VTYT ++ GLC A  +   + V ++M+++ + P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            DN  +  L+      G       +L+ M    +  +   YG L+   C       A  L
Sbjct: 272 -DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
            D ++ K I  +P   +      Y  +I      G   +       +++ G+  D   FN
Sbjct: 331 FDSMIRKGI--KPNVAI------YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFN 382

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            +   ++K+   D A  I   M ++G+  D   Y  LI++  + G   DA    + M+ +
Sbjct: 383 IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNE 442

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G +P   +F S++  L    + + A      M+ +G++ ++     IL  L  +G V +A
Sbjct: 443 GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKA 502

Query: 539 LGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
              IDLM + G+ P   ++ +L+      G+   A K LD  L      D  +Y  +L  
Sbjct: 503 QRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHG 562

Query: 596 LLAAGKTLNAYSILFKIMEKGGVT 619
              AG+  +AY + F+ M + G+T
Sbjct: 563 YCRAGRIDDAYGV-FREMLRNGIT 585



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/517 (20%), Positives = 229/517 (44%), Gaps = 45/517 (8%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+ L +   ++ A  +   M  KGV+ D D +  LI  Y   G  +E V++ + M
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF------ 171
              G++    +Y +L   +   GR   A+  F+ M+ +GI+P    Y +++ G+      
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 172 -----FLSLKLET------------------------AIRFFEDMKSRGISLDVVTYNTM 202
                 L+L +E                         A+  F  MK +G+S DVV Y  +
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGAL 419

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+   +  ++D+A   F +M  + + P +  + +++ G   V++ + A   + EM +  +
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI 479

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P+ V +  +L  LC  G++++ Q+++ +++ER         +  L+G  C  G ++ AA
Sbjct: 480 RPDVVFFNTILCNLCTKGQVMKAQRLI-DLMERVGTRPGVISYTTLIGGHCLVGRIDEAA 538

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
             L  M+ + +  +   Y  L+  +C+A   D A  +  +++   I   P         +
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGIT--PG------VVT 590

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y+ ++  L    +  +A+  +  ++  G   +   +N ++ G SK    D AF++ + + 
Sbjct: 591 YSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLC 650

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            +    +   +  +I +  + G   DA     ++   G  P    +  + E+L E+G ++
Sbjct: 651 SKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLE 710

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
               +  +M + G   N  ++  ++  LL RG +  A
Sbjct: 711 EFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/476 (21%), Positives = 202/476 (42%), Gaps = 10/476 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L   G+   AR +   M +KG++ +  ++ +LI  Y  KG + E   + 
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           ++M + G+      ++ +F    ++     A   FNKM  +G+ P    Y  ++      
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKL 426

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +++ A+  F  M + G++ ++  +N+++ G     K ++A++ + EM  + I P V+ +
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++       +   A R+ D M+    +P  ++YT L+ G C  G++ E  K L  M+ 
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D   +  LL   C++G ++ A  V + M+R  I      Y  ++        + 
Sbjct: 547 VGLKP-DEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            A +L   ++         S        YN ++  L  N    +A   F+ L  K   L+
Sbjct: 606 EAKELYLNMI--------TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              FN +I    K G  + A  +   +   G+  D   Y  + E+ + +G   +      
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFS 717

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
           +M + G +P S +  +++  L   G +  A   +  + EK         A ++  L
Sbjct: 718 AMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLL 773


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/570 (24%), Positives = 267/570 (46%), Gaps = 37/570 (6%)

Query: 7   TTRLQNKIRALVPQFDHNLVYNVLHGAKNSEH-ALQFFRWVERAGLFNHDRETHLKMIEI 65
           T +  NK        +  L+  VL+  +N    AL+FFRW ER   F     ++  +++I
Sbjct: 31  TLQYNNKFLFHAAVAEPKLLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDI 90

Query: 66  LGRVGKLNHARCIL--------------------LDMPKKGVQWDEDMFEVLIESYGKKG 105
           L R G +  A C++                    + MP   +     + ++L+  Y KK 
Sbjct: 91  LARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKL-----ILDLLLWIYVKKS 145

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM-MAKRYFNKMLSEGIEPTRHTY 164
           ++++ + +F  M   G+   VK+ + + +L+  R   + +A+  +N M+  GI PT  TY
Sbjct: 146 LLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTY 205

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N ML  F     ++ A++    M++ G S + VTYN ++NG +   +M++A++L  +M  
Sbjct: 206 NTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLR 265

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
             +E +V +Y  +I+GY    + ++A R+ +EM S    P  VTY  ++ GLC  G++ +
Sbjct: 266 LGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSD 325

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +K+L  MV + + P D   +  L+    + G++  A  +   +   S+      Y  LI
Sbjct: 326 ARKLLDVMVNKNLMP-DLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLI 384

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           +  C+    D A++L D+++        +   D +  ++   ++  C  G    A+  F 
Sbjct: 385 DGLCRLGDLDVAMRLKDEMI--------KHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD 436

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++ +G+  D  A+   I G  K G+P  AF + + M  RG P D   Y   I+   + G
Sbjct: 437 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 496

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              +A   +  M+ +G  P    + S++ +    G ++ A  +   M+ KG+  ++    
Sbjct: 497 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYT 556

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            ++ +  +RG ++ A+     M + G  PN
Sbjct: 557 VLIHSYAVRGRLKLAILHFFEMHEKGVHPN 586



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 223/485 (45%), Gaps = 30/485 (6%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  M++   + G +  A  +L  M   G   ++  + VL+      G ++++ ++   M
Sbjct: 204 TYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDM 263

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            +LG+E SV +YD L +    +G+   A R   +MLS G  PT  TYN +++G     ++
Sbjct: 264 LRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRV 323

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A +  + M ++ +  D+V+YNT+I GY R   + EA  LFAE++ +++ P+V++Y T+
Sbjct: 324 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTL 383

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G   +   D A+R+ DEM      P+  T+T  + G C  G +   +++  EM+ R +
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGL 443

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P   +   +++G + K G  + A  + + M+    P +   Y + I+   K      A 
Sbjct: 444 QPDRFAYITRIVG-ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 502

Query: 358 KLLDKLVEKEII------------------LRPQSTLDMEASS---------YNPMIQHL 390
           +L+ K++   ++                  LR    L +E  S         Y  +I   
Sbjct: 503 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSY 562

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              G+   A + F ++ +KGV  + + +N LI G  K    D A+     M  +G+  + 
Sbjct: 563 AVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNK 622

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  LI      G   +A      M++    P S   RS+++ L +D ++    R +++
Sbjct: 623 YTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVV-RHLEN 681

Query: 510 MVEKG 514
           ++  G
Sbjct: 682 VIAAG 686



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 229/501 (45%), Gaps = 11/501 (2%)

Query: 40  LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIE 99
           L F++ V + GL    +  +  +  +  R   ++ AR +   M + G+      +  +++
Sbjct: 152 LVFYKMVSK-GLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLD 210

Query: 100 SYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
           S+ KKG+VQE++++   M+ +G   +  +Y+ L   +   G    AK     ML  G+E 
Sbjct: 211 SFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEV 270

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
           + +TY+ ++ G+    ++E A R  E+M SRG    VVTYNT++ G  ++ ++ +A KL 
Sbjct: 271 SVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLL 330

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
             M  KN+ P ++SY T+I GY  +    +A  +F E++   + P+ VTY  L+ GLC  
Sbjct: 331 DVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRL 390

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
           G +    ++  EM+ ++ P  D   F   +   CK G+L  A ++   M+   +  +   
Sbjct: 391 GDLDVAMRLKDEMI-KHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFA 449

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y   I    K     +A  + ++++ +     P   +     +YN  I  L   G   +A
Sbjct: 450 YITRIVGELKLGDPSKAFGMQEEMLARGF---PPDLI-----TYNVFIDGLHKLGNLKEA 501

Query: 400 EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
               ++++  G++ D V + ++I  H   G+   A  +   M  +G+      Y  LI S
Sbjct: 502 SELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHS 561

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           Y  +G    A      M E G  P    + +++  L +  ++  A      M  KG+  N
Sbjct: 562 YAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPN 621

Query: 519 LDLVAKILEALLMRGHVEEAL 539
                 ++      GH +EAL
Sbjct: 622 KYTYTILINENCNLGHWQEAL 642



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 95/188 (50%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T+   I+ L ++G L  A  ++  M   G+  D   +  +I ++   G ++++ 
Sbjct: 478 FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKAR 537

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            +F  M   G+  SV +Y  L      RGR  +A  +F +M  +G+ P   TYN ++ G 
Sbjct: 538 ALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 597

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               K++ A  FF +M+++GIS +  TY  +IN         EA +L+ +M ++ I+P  
Sbjct: 598 CKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 657

Query: 232 ISYTTMIK 239
            ++ +++K
Sbjct: 658 CTHRSLLK 665



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/364 (20%), Positives = 164/364 (45%), Gaps = 16/364 (4%)

Query: 288 VLREMVERYIPP--KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           V  +MV + + P  K+ +  ++LL  + +  +++ A +V   M+   I      Y  +++
Sbjct: 153 VFYKMVSKGLLPDVKNCNRVLRLL--RDRDNNIDVAREVYNVMVECGICPTVVTYNTMLD 210

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
           +FCK  M   A++LL ++  + +   P         +YN ++  L H+G+  +A+   + 
Sbjct: 211 SFCKKGMVQEALQLLFQM--QAMGCSPNDV------TYNVLVNGLSHSGEMEQAKELIQD 262

Query: 406 LMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +++ G+ +    ++ LIRG+ ++G  + A  + + M  RG       Y  ++    + G 
Sbjct: 263 MLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGR 322

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
            +DA+  LD M+     P    + +++      G +  A  +   +  + +  ++     
Sbjct: 323 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNT 382

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           +++ L   G ++ A+   D M++ G  P+   F + +    + G    A +L D  L R 
Sbjct: 383 LIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRG 442

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
              D  +Y   +   L  G    A+ +  +++ +G   D  + +  I GL++ GN K+A 
Sbjct: 443 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 502

Query: 642 ILSR 645
            L +
Sbjct: 503 ELVK 506



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 116/250 (46%), Gaps = 9/250 (3%)

Query: 398 KAEIFFRQLMKKGVLDPVAFNN----LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           K  + F +++ KG+L  V   N    L+R   ++ N D A E+  +M   G+      Y 
Sbjct: 149 KCLLVFYKMVSKGLLPDVKNCNRVLRLLR--DRDNNIDVAREVYNVMVECGICPTVVTYN 206

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            +++S+ +KG   +A   L  M   G SP    +  ++  L   G ++ A  +++ M+  
Sbjct: 207 TMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRL 266

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G++ ++     ++     +G +EEA    + M+  G+VP    +++++  L + G+   A
Sbjct: 267 GLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDA 326

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            KLLD  + ++ + DL SY  ++      G    A+ +  ++  +       + + LI G
Sbjct: 327 RKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDG 386

Query: 631 LNQEGNTKQA 640
           L + G+   A
Sbjct: 387 LCRLGDLDVA 396


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 152/631 (24%), Positives = 281/631 (44%), Gaps = 31/631 (4%)

Query: 44  RWVERAGLFNHDRETHL--KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           R V+RA       + +L  K+I  L R G+ + A  +L    + G   D   +  L+  Y
Sbjct: 64  RLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGY 123

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
            + G +  + ++   M    V     +Y  + + +  RGR   A    + ML  G +P+ 
Sbjct: 124 CRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 180

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
            TY V+L     S     A+   ++M+++G + ++VTYN +ING  R  ++D+A +    
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 240

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           +     +P  +SYTT++KG  A +R +D   +F EM   +  PN VT+  L+   C  G 
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           +    +VL +M   +    + ++   ++   CK G ++ A   L  M       +   Y 
Sbjct: 301 VERAIQVLEQM-SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 359

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            +++  C+AE ++ A +LL ++V K     P + +     ++N  I  LC  G   +A +
Sbjct: 360 TVLKGLCRAERWEDAKELLKEMVRKNC---PPNEV-----TFNTFICILCQKGLIEQATM 411

Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
              Q+ + G  ++ V +N L+ G   +G  DSA E+   M  +    +   Y  L+    
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGLC 468

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
                  A   L  M++   +P    F  ++    + G +  A  +++ M+E G   NL 
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL--- 574
               +L+ +    + EEAL  +  ++ +G  P+   + S++ VLS + +   A+K+    
Sbjct: 529 TYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 588

Query: 575 -DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
            D  +    +I    Y K+L AL     T  A      ++  G + +  +   LI GL  
Sbjct: 589 QDLGMRPKAVI----YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLAN 644

Query: 634 EGNTKQA-DILSRMI-RGEMSRGSQKEKKQK 662
           E   K+  D+L  +  RG +++   +E + K
Sbjct: 645 EDFLKETRDLLRELCSRGVLNKNLLEEWRPK 675



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 227/517 (43%), Gaps = 13/517 (2%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S    +A  + ++ R     A R  ++  S G  P  +    ++       +   A R  
Sbjct: 42  SPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVL 101

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
              +  G ++DV  YNT++ GY R+ ++D A +L A M    + P   +YT +I+G    
Sbjct: 102 RAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDR 158

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            R  +AL + D+M     +P+ VTYT LL  +C +    +  +VL EM  +   P +   
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP-NIVT 217

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  ++   C+ G ++ A + L  +       +   Y  +++  C A+ ++   +L  +++
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMM 277

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL-IRG 423
           EK  +   + T DM       +++  C  G   +A     Q+   G        N+ I  
Sbjct: 278 EKNCMPN-EVTFDM-------LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT 329

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K+G  D AF+ +  MG  G   D  +Y  +++   R     DAK  L  M+     P 
Sbjct: 330 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              F + +  L + G ++ A+ +++ M E G + N+     ++    ++G V+ AL    
Sbjct: 390 EVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFY 449

Query: 544 LMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
            M    +   + +LL+ L    +  AA +LL   L +DC  ++ ++  ++      G   
Sbjct: 450 SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            A  ++ ++ME G   +  + + L+ G+  + N+++A
Sbjct: 510 EAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEA 546



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 1/182 (0%)

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
           A+A   +D     G +P   L   ++ +L   GR   A+RV+++    G   ++     +
Sbjct: 60  AEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTL 119

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           +      G ++ A   I  M  +     +  ++  L ++G+   A+ LLD  L R C   
Sbjct: 120 VAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPS 179

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
           + +Y  +L+A+  +     A  +L ++  KG   +  + + +I G+ +EG    A + L+
Sbjct: 180 VVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLN 239

Query: 645 RM 646
           R+
Sbjct: 240 RL 241


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 153/660 (23%), Positives = 281/660 (42%), Gaps = 52/660 (7%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W + ++N++  L    +  LV  VL   K+  +A+ +FRW ER     H RE +  ++ +
Sbjct: 80  WGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMV 139

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQES--------------- 110
           + R  K N    IL +M   G     +    ++ S+ K   ++E+               
Sbjct: 140 MARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPA 199

Query: 111 --------------------VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
                               + +F  M++LG   +V  +  L ++  R GR   A    +
Sbjct: 200 FSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLD 259

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +M S  +EP    YNV +  F  + K++ A +FF +MK+ G+ LD VTY +MI    +  
Sbjct: 260 EMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKAD 319

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +++EA +LF  M +    P   +Y TMI GY    + +DA  + +  +     P+ V+Y 
Sbjct: 320 RLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYN 379

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            +L  L   G++ E  K   EM +  IP  + S +  ++ + CK+G L  A  V  AM  
Sbjct: 380 CILSCLGRKGQVDEALKKFEEMKKDAIP--NLSTYNIMIDMLCKAGKLETALVVRDAMKD 437

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +        I+++  CKA+  D A  + + L  K    RP      +A +Y  +I+ L
Sbjct: 438 AGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK--TCRP------DAVTYCSLIEGL 489

Query: 391 CHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
             +G+  +A   + Q++    + + V + +LIR   K G  +   +I   M R G   D 
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
                 ++   + GE    +     +   G  P +  +  ++  L + G    A  +  +
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT 609

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGK 566
           M E+G   +      +++     G V +A   ++ M   G  P    + S++  L++  +
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDR 669

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG---GVTDWKS 623
              A  L +    +   +++  Y  ++D     G+   AY I+ ++M+KG    V  W  
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 150/633 (23%), Positives = 283/633 (44%), Gaps = 22/633 (3%)

Query: 19  PQFD--HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL--KMIEILGRVGKLNH 74
           P F    NL+   L  +++S+  L  F+ ++  G   +    HL   +I +  R G+++ 
Sbjct: 198 PAFSAYTNLI-GALSTSRDSDCMLTLFQQMQELG---YAVNVHLFTTLIRVFAREGRVDA 253

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +L +M    ++ D  ++ V I+ +GK G V  + K F  MK  G+     +Y ++  
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIG 313

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
           ++ +  R   A   F  M      P  + YN M+ G+ ++ K E A    E  + +G   
Sbjct: 314 VLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            VV+YN +++   R  ++DEA K F EMK+  I P + +Y  MI       + + AL + 
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVR 432

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           D MK   + PN +T   ++  LC A ++ +   +   +  +   P D   +  L+    +
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP-DAVTYCSLIEGLGR 491

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G ++ A  + + M+  +    A  Y  LI NF K    +   K+ +++      LR   
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM------LRLGC 545

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
           + D+     N  +  +   G+  K    F+++   G + D  ++  LI G  K G    A
Sbjct: 546 SPDLLL--LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA 603

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           +E+   M  +G   D  AY  +I+ + + G+   A   L+ M   GH P    + SV++ 
Sbjct: 604 YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L +  R+  A  + +    KG++ N+ + + +++     G ++EA   ++ +MQ G  PN
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 723

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              ++ LL  L +  +   A+          C  +  +Y  ++  L    K   A+    
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           ++ ++G   +  +   +I+GL + GN  +AD L
Sbjct: 784 EMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 211/464 (45%), Gaps = 13/464 (2%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A   R   K   L P     N++ + L  A+  + A   F  ++       D  T+  
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC-RPDAVTYCS 484

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +IE LGR G+++ A  +   M       +  ++  LI ++ K G  ++  KI++ M +LG
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG 544

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               +   +     + + G     +  F ++ + G  P   +Y +++ G   +     A 
Sbjct: 545 CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAY 604

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F  MK +G  LD   YNT+I+G+ +  K+++A +L  EMK K  EPTV++Y ++I G 
Sbjct: 605 ELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             ++R D+A  +F+E KS  ++ N V Y++L+ G    G++ E   ++ E++++ + P +
Sbjct: 665 AKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP-N 723

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  LL    K+  ++ A    ++M  L        Y ILI   CK   +++A     
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPVAFNNL 420
           ++ ++    +P         +Y  MI  L   G   +A+  F +  +K GV D   +N +
Sbjct: 784 EMQKQG--FKPN------VFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAI 835

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           I G S       A+ + +    +G        + L++S L K E
Sbjct: 836 IEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDS-LHKAE 878



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/536 (23%), Positives = 225/536 (41%), Gaps = 33/536 (6%)

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           ++Y++L  ++ R  ++   ++   +M   G  P+ +T   ++  F  S KL  A  F + 
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M+          Y  +I   +  +  D    LF +M+E      V  +TT+I+ +    R
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            D AL + DEMKS  ++P+ V Y   +     AGK+    K   EM    +   D+  + 
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVL-DDVTYT 309

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            ++GV CK+  LN A ++ + M +      A  Y  +I  +  A  ++ A  LL++   K
Sbjct: 310 SMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRK 369

Query: 367 EII----------------------LRPQSTLDMEA----SSYNPMIQHLCHNGQTGKAE 400
             I                      L+    +  +A    S+YN MI  LC  G+   A 
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETA- 428

Query: 401 IFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           +  R  MK   L P  +  N ++    K    D A  I + +  +    DA  Y  LIE 
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             R G   +A    + M++    P + ++ S++ + F+ GR +   ++   M+  G   +
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           L L+   ++ +   G +E+       +   G +P+   +  L+  L + G    A +L  
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
               + C++D  +Y  V+D    +GK   AY +L ++  KG      +   +I GL
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/529 (24%), Positives = 247/529 (46%), Gaps = 20/529 (3%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L P   + N +   L  A+++  A+  F  +   G  NH   T+  +I  L +   L+
Sbjct: 40  RGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNH--TTYYNLIHPLCKARLLD 97

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +LLDM  +G+     +  V+I    + G ++ ++ ++  M          +Y  L 
Sbjct: 98  EAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLV 156

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + GR   A +   +M+S    P   T  V++    L  +++ A    E+M  RG++
Sbjct: 157 HGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMA 216

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLF-AEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
            + +TY+ +++G  + +++DEA  L   E+  +   P +++Y+T+I G     R  DA+ 
Sbjct: 217 ANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 276

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           IF+EM      P A+TY +L+ G C AG M E  ++L +MV+    P D   +  L+   
Sbjct: 277 IFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAP-DVITYTTLMSAF 332

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           CK G L+ A ++ + M+   +  +   +  L++  C     + A++LL+++  +     P
Sbjct: 333 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC---P 389

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPD 431
            +       +YN ++   C + Q  KAE        +G V + V +N L+ G  + G  D
Sbjct: 390 PTIY-----TYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 444

Query: 432 SAFEIVKIMGRRG--VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            A + +  +   G   P     Y  ++++  R G   DA    + MI+ G+ PA++ F +
Sbjct: 445 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 504

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           V+ +L +  + Q A  +++ M++ G          ++ A    G +++A
Sbjct: 505 VVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 140/603 (23%), Positives = 260/603 (43%), Gaps = 53/603 (8%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQES 110
           +  D  T   ++  L    KL H   +LLD +  +G+  D      ++           +
Sbjct: 6   YPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTA 65

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYM-MAKRYFNKMLSEGIEPTRHTYNVMLW 169
           + +FD M +LG       Y+ +  L   + R +  A      M S G+ P    +NV++ 
Sbjct: 66  MALFDKMAELGAVNHTTYYNLIHPLC--KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIG 123

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G   + +L  A+  +  M       D +TY  +++G ++  ++ +A ++  EM      P
Sbjct: 124 GLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVP 182

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE-VQKV 288
              + T +++     +R DDA  + +EM    +  NA+TY+AL+ GLC   ++ E V  +
Sbjct: 183 DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALL 242

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L E+  R   P D   +  ++   CK+G L  A D+ + M   S    A  Y  LI  +C
Sbjct: 243 LGEVTRRGFTP-DIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYC 298

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM- 407
           +A   D AI+LL K+V+             +  +Y  ++   C  G+   A   F+Q++ 
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCA--------PDVITYTTLMSAFCKMGRLDDAYELFQQMVA 350

Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            K   D V F +L+ G   EG  + A E+++ + RRG P     Y C+++ Y +  +   
Sbjct: 351 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRK 410

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG--VKENLDLVAKI 525
           A+  +      G  P +  +  ++      GR   A + +  +  +G     ++ + A I
Sbjct: 411 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAII 470

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           L+AL   G  ++A+   + M+Q G VP                AA               
Sbjct: 471 LDALCRDGRTDDAVQFYEEMIQRGYVP----------------AA--------------- 499

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            A++  V+ AL  A +   A+ +L ++++ G      + D +++   + G  ++AD L+ 
Sbjct: 500 -ATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELAS 558

Query: 646 MIR 648
            +R
Sbjct: 559 ELR 561



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 207/492 (42%), Gaps = 49/492 (9%)

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKL-ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           ML  G      T+ V+L G   S KL        ++++ RG+S D V  NT++      +
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
               A  LF +M E        +Y  +I         D+A+ +  +MKS  + P  + + 
Sbjct: 61  DTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            ++ GLC AG++     V R+M + +  P D   + KL+    K+G L  A  VL+ M+ 
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAH--PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVS 177

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
                +     +++++ C  +  D A +L+++++ + +           A +Y+ ++  L
Sbjct: 178 ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMA--------ANAITYSALVDGL 229

Query: 391 CHNGQTGKA-EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           C   +  +A  +   ++ ++G   D V ++ +I G  K G    A +I + M        
Sbjct: 230 CKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPT 286

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
           A  Y  LI  Y R G+  +A   L  M++D  +P    + ++M +  + GR+  A  + +
Sbjct: 287 AITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQ 346

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTI 568
            MV   +                                S  V  F SL+  L  +G+  
Sbjct: 347 QMVANKL--------------------------------SPDVVTFTSLVDGLCGEGRME 374

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A++LL+    R C   + +Y  V+D    + +   A  ++     +G V +  + + L+
Sbjct: 375 DALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILV 434

Query: 629 AGLNQEGNTKQA 640
           AG  + G T QA
Sbjct: 435 AGCCRAGRTDQA 446



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 99/219 (45%), Gaps = 8/219 (3%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           A   + D  T   +++ L   G++  A  +L ++ ++G       +  +++ Y K   V+
Sbjct: 350 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVR 409

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE-PTR-HTYNV 166
           ++ ++    +  G   +  +Y+ L     R GR   A +Y +++ SEG   PT    Y +
Sbjct: 410 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 469

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           +L       + + A++F+E+M  RG      T+ T++    +  +  +A +L  EM +  
Sbjct: 470 ILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG 529

Query: 227 IEPTVISYTTMIKGYV---AVERADD---ALRIFDEMKS 259
             P   +   ++  Y     +++AD+    LR++ +  S
Sbjct: 530 HTPGPGTCDAVVSAYCRAGMIQKADELASELRLYTDKSS 568


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/586 (22%), Positives = 260/586 (44%), Gaps = 36/586 (6%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K+I  L R G+ + A  +L      G   D   +  L+  Y + G +  + ++   M   
Sbjct: 79  KLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP-- 136

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
            V     +Y  + + +  RGR   A    + ML  G +P+  TY V+L     S     A
Sbjct: 137 -VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEA 195

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +   ++M+++G + ++VTYN +ING  R  ++D+A+++   +     +P ++SYTT++KG
Sbjct: 196 MNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKG 255

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
             A  R DD   +F EM      PN VT+  L+   C  G +    +VL++M +    P 
Sbjct: 256 LCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTP- 314

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           + ++   ++   CK G ++ A D L  M       +   Y  ++   C+A  ++ A +LL
Sbjct: 315 NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374

Query: 361 DKLVEKE---------------------------IILRPQSTLDMEASSYNPMIQHLCHN 393
            ++V K                            I L P+    +   +YN ++   C  
Sbjct: 375 PEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQ 434

Query: 394 GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           G+   A   F  L  +   + + +  L+ G       D+A E++  M ++  P +A  + 
Sbjct: 435 GRVDSALELFNNLPCEP--NTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFN 492

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            L+  + +KG   +A   ++ M+E G +P    F ++++ + +D   + A  ++  +V K
Sbjct: 493 VLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK 552

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           GV  +    + +++ L      EEA+  +  +   G  P    ++ +L  L ++ +T  A
Sbjct: 553 GVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQA 612

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           +    + +   C+ + ++Y  +++ L   G    A  +L ++  KG
Sbjct: 613 IDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 658



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 131/566 (23%), Positives = 249/566 (43%), Gaps = 55/566 (9%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           L+ N+    + S+ A +  R  E +G    D   +  ++    R G+L+ AR ++  MP 
Sbjct: 80  LIRNLCRRGRTSDAA-RVLRTAEASGA-PVDVFAYNTLVAGYCRYGRLDAARRLIASMP- 136

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
             V  D   +  +I     +G V +++ + D M Q G + SV +Y  L + + +   +  
Sbjct: 137 --VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGE 194

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A    ++M ++G  P   TYNV++ G     +++ A      + S G   D+V+Y T++ 
Sbjct: 195 AMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLK 254

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV---AVERA-------------- 247
           G    ++ D+ + LFAEM +K   P  +++  +++ +     VERA              
Sbjct: 255 GLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTP 314

Query: 248 ------------------DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
                             DDA    + M  +   P+ ++YT +L GLC AG+    +++L
Sbjct: 315 NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            EMV +  PP + + F   + + C+ G +  A  +++ M           Y  L+  FC 
Sbjct: 375 PEMVRKNCPPNEVT-FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCV 433

Query: 350 AEMYDRAIKLLDKL-VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ-TGKAEIFFRQLM 407
               D A++L + L  E   I            +Y  ++  LCH  +    AE+    + 
Sbjct: 434 QGRVDSALELFNNLPCEPNTI------------TYTTLLTGLCHAERLDAAAELLAGMIQ 481

Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           K   L+ V FN L+    ++G  + A E+V  M   G   +   +  L++   +     +
Sbjct: 482 KDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEE 541

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A   L  ++  G S  +  + SV++ L  + R + A +++ ++ + G++  + +  KIL 
Sbjct: 542 ALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILF 601

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN 553
           AL  R   ++A+     M+ +G +PN
Sbjct: 602 ALCKRCETDQAIDFFAYMVSNGCMPN 627



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/511 (22%), Positives = 225/511 (44%), Gaps = 16/511 (3%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A R      S G  P  +    ++       +   A R     ++ G  +DV  YNT++ 
Sbjct: 58  AARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVA 117

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           GY R+ ++D A +L A M    + P   +YT +I+G     R  DAL + D+M     +P
Sbjct: 118 GYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQP 174

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + VTYT LL  +C +    E   VL EM  +   P +   +  ++   C+ G ++ A ++
Sbjct: 175 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP-NIVTYNVIINGMCREGRVDDAKEI 233

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L  +       +   Y  +++  C A  +D    L  ++V+K+ +   + T DM      
Sbjct: 234 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPN-EVTFDM------ 286

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL-IRGHSKEGNPDSAFEIVKIMGRR 443
            +++  C  G   +A    +Q+ + G        N+ I    K+G  D A++ +  MG  
Sbjct: 287 -LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   D  +Y  ++    R G    AK  L  M+     P    F + +  L + G ++ A
Sbjct: 346 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 405

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
            ++++ M E G    +     ++    ++G V+ AL   + +    +   + +LL+ L  
Sbjct: 406 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCH 465

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
             +  AA +LL   + +DC ++  ++  ++      G    A  ++ ++ME G   +  +
Sbjct: 466 AERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLIT 525

Query: 624 SDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
            + L+ G+ ++ N+++A     ++ G +S+G
Sbjct: 526 FNTLLDGITKDCNSEEA---LELLHGLVSKG 553



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/465 (21%), Positives = 204/465 (43%), Gaps = 48/465 (10%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  ++  +++ L    + +  + +  +M  K    +E  F++L+  + + G+V+ ++
Sbjct: 242 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAI 301

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++   M Q G   +    + +   I ++GR   A  + N M   G  P   +Y  +L G 
Sbjct: 302 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGL 361

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + + E A     +M  +    + VT+NT I    +   +++A KL   M E      +
Sbjct: 362 CRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGI 421

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++Y  ++ G+    R D AL +F+ +     +PN +TYT LL GLC A            
Sbjct: 422 VTYNALVHGFCVQGRVDSALELFNNLPC---EPNTITYTTLLTGLCHA------------ 466

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
             ER                      L+AAA++L  MI+   P  A  + +L+  FC+  
Sbjct: 467 --ER----------------------LDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKG 502

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             + A++L+++++E      P         ++N ++  +  +  + +A      L+ KGV
Sbjct: 503 FVEEAMELVNQMMEHGCT--PNLI------TFNTLLDGITKDCNSEEALELLHGLVSKGV 554

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            LD + +++++   S+E   + A +++  +   G+      Y  ++ +  ++ E   A  
Sbjct: 555 SLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAID 614

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
               M+ +G  P  S +  ++E L  +G ++ A  V+  +  KGV
Sbjct: 615 FFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 164/380 (43%), Gaps = 35/380 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++    R G +  A  +L  M + G   +  +  ++I +  K+G V ++    + M   G
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
                 SY  + + + R GR+  AK    +M+ +   P   T+N  +        +E AI
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 406

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +  E M   G S+ +VTYN +++G+    ++D A +LF  +     EP  I+YTT++ G 
Sbjct: 407 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGL 463

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              ER D A  +   M   D   NAVT+  L+   C  G + E  +++ +M+E    P +
Sbjct: 464 CHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP-N 522

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  LL    K  +   A ++L  ++   +  +   Y  +++   + +  + AI++L 
Sbjct: 523 LITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLH 582

Query: 362 KLVEKEIILRPQ------------------STLDMEA-----------SSYNPMIQHLCH 392
            +  +++ +RP+                    +D  A           S+Y  +I+ L H
Sbjct: 583 AV--QDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAH 640

Query: 393 NGQTGKAEIFFRQLMKKGVL 412
            G   +A     +L  KGVL
Sbjct: 641 EGLLKEARYVLSELYAKGVL 660



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 165/370 (44%), Gaps = 6/370 (1%)

Query: 1   MAERAWTTRLQNKIRALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
           M ERA     Q       P     N+V N +      + A  F   +   G  N D  ++
Sbjct: 296 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC-NPDTISY 354

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             ++  L R G+  HA+ +L +M +K    +E  F   I    +KG++++++K+ ++M +
Sbjct: 355 TTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPE 414

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G    + +Y+AL      +GR   A   FN +     EP   TY  +L G   + +L+ 
Sbjct: 415 YGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDA 471

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A      M  +   L+ VT+N +++ + +   ++EA +L  +M E    P +I++ T++ 
Sbjct: 472 AAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLD 531

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G      +++AL +   + S  V  + +TY++++  L    +  E  ++L  + +  + P
Sbjct: 532 GITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRP 591

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
           K   ++ K+L   CK    + A D    M+          Y ILIE      +   A  +
Sbjct: 592 K-VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYV 650

Query: 360 LDKLVEKEII 369
           L +L  K ++
Sbjct: 651 LSELYAKGVL 660



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 167/396 (42%), Gaps = 16/396 (4%)

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +A R+ +   S    P+    T L+  LC  G+  +  +VLR   E    P D   +  L
Sbjct: 57  EAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRT-AEASGAPVDVFAYNTL 115

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   C+ G L+AA  ++ +M    +P +A  Y  +I   C       A+ LLD ++++  
Sbjct: 116 VAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGC 172

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
             +P         +Y  +++ +C +   G+A     ++  KG   + V +N +I G  +E
Sbjct: 173 --QPSVV------TYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 224

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G  D A EI+  +   G   D  +Y  +++         D K     M++    P    F
Sbjct: 225 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 284

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++      G V+ A +V++ M + G   N  L   ++ A+  +G V++A   ++ M  
Sbjct: 285 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 344

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  P+   + ++L  L   G+   A +LL   + ++C  +  ++   +  L   G    
Sbjct: 345 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 404

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           A  ++  + E G      + + L+ G   +G    A
Sbjct: 405 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA 440


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 153/641 (23%), Positives = 280/641 (43%), Gaps = 71/641 (11%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR----------VGKLNHARCILLDMP 83
           ++ + AL+FFRW +    F    E++  ++ IL            + +L  +R IL    
Sbjct: 107 QDPKLALKFFRWAKTKFGFCLTTESYCLLVHILFYARMYFDANFFLKELISSRRILPGFD 166

Query: 84  KKGVQWDE--------DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
              V W           +F+ L   + + G+++E+ + F  M +  V    +S +A    
Sbjct: 167 VFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYR 226

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           + + G+  ++ ++F  M+  GI  +  TYN+M+        + TA   F  MK  G++ D
Sbjct: 227 LAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPD 286

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           +VTYN++I+GY +   +DE+  LF EMK+   EP VI+Y  +I  +   E+   A     
Sbjct: 287 IVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLH 346

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EMK+  +KPN VTY+ L+  LC    + +  K L +M    + P + + +  L+   CK+
Sbjct: 347 EMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFT-YTSLIDANCKA 405

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G+L+ A  +   M+++ +      Y  L++  CK                          
Sbjct: 406 GYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCK-------------------------- 439

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
                             G+  +AE  FR ++K GV   +  +  L+ GH K    ++A 
Sbjct: 440 -----------------EGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENAL 482

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           E++K +  + +  D   Y  +I     + +  + +  +  M   G    S ++   M++ 
Sbjct: 483 ELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAY 542

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI----DLMMQSGS 550
           F+ G+   A  +++ M + GV+  +     +++ L  +G VEEA+       D  +Q  +
Sbjct: 543 FKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNN 602

Query: 551 VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
           V    +L+  L +     AA KL D    ++ + D  +Y  ++D  L       A +I  
Sbjct: 603 VAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRS 662

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEM 651
           ++ E G   D  +   L+ GL+Q    +QA    RM   EM
Sbjct: 663 RMSELGMELDLHAYTSLVWGLSQGNLVQQA----RMFLNEM 699



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 195/415 (46%), Gaps = 10/415 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N     +    A  F   ++ +GL   +  T+  +I+ L +   L  A   LLDM
Sbjct: 325 YNALINCFCKYEQMPKAFHFLHEMKNSGL-KPNVVTYSTLIDALCKEHMLQQAIKFLLDM 383

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G+  +E  +  LI++  K G + +++K+ D M Q+ V  +V +Y  L   + + GR 
Sbjct: 384 RRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRM 443

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
           M A+  F  M+  G+ P   TY  ++ G   + ++E A+   +++K + I  D++ Y T+
Sbjct: 444 MEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTI 503

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G     K++E E + +EMK   I    + YT  +  Y    +  +AL +  EM    V
Sbjct: 504 IWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGV 563

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +   VT+  L+ GLC  G + E       M +  + P + +V   L+   CK+ ++ AA 
Sbjct: 564 EVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAK 623

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   M   ++  +   Y  LI+   K + +  A+ +  ++ E          ++++  +
Sbjct: 624 KLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSEL--------GMELDLHA 675

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
           Y  ++  L       +A +F  +++ KG++ D +    L+R + + G+ D A E+
Sbjct: 676 YTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIEL 730



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/226 (20%), Positives = 106/226 (46%), Gaps = 1/226 (0%)

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           KL     ++ +M   G++ +  ++ + +++Y K G   E++ +   M  LGVE ++ ++ 
Sbjct: 512 KLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFC 571

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTR-HTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            L   + ++G    A  YF +M    ++P        ++ G   +  +E A + F++M+ 
Sbjct: 572 VLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQD 631

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           + +  D + Y  +I+G  + K   EA  + + M E  +E  + +YT+++ G         
Sbjct: 632 KNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQ 691

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           A    +EM    + P+ +    LL    + G + E  ++  E++++
Sbjct: 692 ARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 1/191 (0%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE-RSV 126
           + GK   A  +L +M   GV+     F VLI+   KKG+V+E++  F  M    ++  +V
Sbjct: 544 KTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNV 603

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
               AL   + +      AK+ F++M  + + P +  Y  ++ G       + A+     
Sbjct: 604 AVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSR 663

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M   G+ LD+  Y +++ G ++   + +A     EM  K I P  I    +++ Y  +  
Sbjct: 664 MSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGS 723

Query: 247 ADDALRIFDEM 257
            D+A+ + DE+
Sbjct: 724 IDEAIELHDEL 734


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/619 (23%), Positives = 269/619 (43%), Gaps = 42/619 (6%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR---VGKLNHARCILLDM 82
           V  +++   N++ ALQFF W+ +   + HD    + M+  L +   +   +H R +++  
Sbjct: 74  VSKIINTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKA 133

Query: 83  PKK------------GVQWDED--------MFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
            +             G+   +          F  L+   GK  +V  +  ++  +   GV
Sbjct: 134 CRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGV 193

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
           + S+ +++ +  ++ ++G+   A   FNK+    + P   TY  ++ G   + KL+ A  
Sbjct: 194 KPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFE 253

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            F+ M   G + + VTY+T+ING     ++ EA  +  EM EK IEPTV +YT  I    
Sbjct: 254 VFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLC 313

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
            + R DDA+ +   M      P+  TYTA++ GL  AGKM     +  +M++  + P + 
Sbjct: 314 DIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVP-NT 372

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +  L+   C  G    A  +   M        A  Y  +I+     +  ++A+ + +K
Sbjct: 373 VTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNK 432

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
           +++      P  T+     +YN +I      G    A  F   +MK+   +P    +  L
Sbjct: 433 MLKD----GPSPTV----VTYNTLIVENLKRGYLNNATRFL-YMMKESNCEPDERTYCEL 483

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  K G  DSA      M + G+  +   Y  +I+ Y ++G+   A +  + M E+G 
Sbjct: 484 ISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGC 543

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           S +   + +++  L +  R   A +    M E+G++ N      ++  L        A  
Sbjct: 544 SASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFK 603

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
               M +   +PN   + SL+  L ++GK  AA +L +      C   + +Y  ++  L 
Sbjct: 604 IFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEPTIDTYSTLVSGLC 659

Query: 598 AAGKTLNAYSILFKIMEKG 616
             G++  A  ++  + EKG
Sbjct: 660 REGRSNEASQLVENMKEKG 678



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/571 (24%), Positives = 257/571 (45%), Gaps = 18/571 (3%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A + F  + + G  N +  T+  +I  L   G++  A  +L +M +KG++     + V
Sbjct: 249 DKAFEVFDRMVKDGC-NPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTV 307

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
            I S    G V +++ +   M + G   SV++Y A+   + R G+  +A   ++KML EG
Sbjct: 308 PISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG 367

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TYN ++       +   A++ F+ M+  G   +  TYN +I G      +++A 
Sbjct: 368 LVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAM 427

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +F +M +    PTV++Y T+I   +     ++A R    MK  + +P+  TY  L+ G 
Sbjct: 428 VVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGF 487

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  GK+        EM++  I P +   +  ++   CK G ++ A  + + M        
Sbjct: 488 CKGGKLDSATSFFYEMLKCGISP-NQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSAS 546

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  +I    K   +  A K   K+ E+   L+P +       +Y  +I  LC N  T
Sbjct: 547 IETYNAIISGLSKGNRFSEAEKFCAKMTEQG--LQPNTI------TYTSLINGLCKNTAT 598

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A   F ++ KK  L +   + +LI G  +EG  D+A  + +     G     D Y  L
Sbjct: 599 NLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEPTIDTYSTL 654

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           +    R+G   +A   +++M E G SP+  ++ S++ +  +  +V  A  +   M  KG 
Sbjct: 655 VSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGF 714

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQ---SGSVPNFDSLLSVLSEKGKTIAAVK 572
           + +L +   ++ AL      EEAL     +++   +  +  +  L+  L ++G +   +K
Sbjct: 715 QPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMK 774

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
            L     R+C   L +Y  +   L   GK++
Sbjct: 775 FLYLMESRNCTPSLHTYIILARELSKVGKSI 805



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 141/584 (24%), Positives = 255/584 (43%), Gaps = 20/584 (3%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + N+L      + A+  F  + +  L   D  T+  +I    R  KL+ A  +   M 
Sbjct: 201 NTMINILCKKGKVQEAVLVFNKIFQFDLC-PDAFTYTSLILGHCRNRKLDKAFEVFDRMV 259

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K G   +   +  LI     +G + E++ + + M + G+E +V +Y      +   GR  
Sbjct: 260 KDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVD 319

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A      M  +G  P+  TY  ++ G F + K+E AI  +  M   G+  + VTYN +I
Sbjct: 320 DAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALI 379

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           N      +   A K+F  M+         +Y  +IKG   ++  + A+ +F++M      
Sbjct: 380 NELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPS 439

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P  VTY  L+      G +    + L  M E    P D   + +L+   CK G L++A  
Sbjct: 440 PTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP-DERTYCELISGFCKGGKLDSATS 498

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
               M++  I      Y  +I+ +CK    D A+ L +++ E        +       +Y
Sbjct: 499 FFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEE--------NGCSASIETY 550

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           N +I  L    +  +AE F  ++ ++G L P  + + +LI G  K    + AF+I   M 
Sbjct: 551 NAIISGLSKGNRFSEAEKFCAKMTEQG-LQPNTITYTSLINGLCKNTATNLAFKIFHEME 609

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           ++    +A  Y  LI    ++G+  DA    + + E+G  P    + +++  L  +GR  
Sbjct: 610 KKNCLPNAHTYTSLIYGLCQEGK-VDAA---ERLTENGCEPTIDTYSTLVSGLCREGRSN 665

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            AS+++++M EKG+  ++++   +L A      V+ AL   +LM   G  P+   +  L+
Sbjct: 666 EASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLI 725

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
             L    +   A+ +    L +    DL  +  ++D LL  G +
Sbjct: 726 CALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDS 769



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 206/445 (46%), Gaps = 22/445 (4%)

Query: 16  ALVPQFDHNLVYNVLHGAKNSEH----ALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
            LVP   + + YN L     +E     AL+ F W+E  G    + +T+ ++I+ L  +  
Sbjct: 367 GLVP---NTVTYNALINELCTEGRFGIALKIFDWMEGHGTL-ANAQTYNQIIKGLFGMDD 422

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           +  A  +   M K G       +  LI    K+G +  + +   +MK+   E   ++Y  
Sbjct: 423 IEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCE 482

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L     + G+   A  +F +ML  GI P + TY  M+ G+    K++ A+  FE M+  G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
            S  + TYN +I+G ++  +  EAEK  A+M E+ ++P  I+YT++I G       + A 
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           +IF EM+  +  PNA TYT+L+ GLC  GK+   +++     E  I       +  L+  
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTI-----DTYSTLVSG 657

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            C+ G  N A+ +++ M    +      Y  L+   CK+   D A+++ + +  K    +
Sbjct: 658 LCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKG--FQ 715

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNP 430
           P   +      Y  +I  LC   +  +A   F+ L+KK    D + +  L+ G  +EG+ 
Sbjct: 716 PHLFI------YKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDS 769

Query: 431 DSAFEIVKIMGRRGVPRDADAYICL 455
           D   + + +M  R        YI L
Sbjct: 770 DLCMKFLYLMESRNCTPSLHTYIIL 794



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 152/349 (43%), Gaps = 15/349 (4%)

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            F  ++ + CK G +  A  V   + +  +  +A  Y  LI   C+    D+A ++ D++
Sbjct: 199 TFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRM 258

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL--I 421
           V+      P S       +Y+ +I  LC+ G+ G+A     ++ +KG+ +P  +     I
Sbjct: 259 VKDGC--NPNSV------TYSTLINGLCNEGRIGEAMDMLEEMTEKGI-EPTVYTYTVPI 309

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
                 G  D A  +V+ MG++G       Y  +I    R G+   A      M+++G  
Sbjct: 310 SSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLV 369

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P +  + +++  L  +GR   A ++   M   G   N     +I++ L     +E+A+  
Sbjct: 370 PNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVV 429

Query: 542 IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
            + M++ G  P    +++L+    ++G    A + L      +C  D  +Y +++     
Sbjct: 430 FNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCK 489

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
            GK  +A S  +++++ G   +  +   +I G  +EG    A  +  RM
Sbjct: 490 GGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERM 538



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/416 (21%), Positives = 172/416 (41%), Gaps = 13/416 (3%)

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
           T+ S+ T++      +    A  ++ ++ S  VKP+ +T+  ++  LC  GK+ E   V 
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            ++ +  + P D   +  L+   C++  L+ A +V   M++      +  Y  LI   C 
Sbjct: 221 NKIFQFDLCP-DAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCN 279

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
                 A+ +L+++ EK I        +    +Y   I  LC  G+   A    R + KK
Sbjct: 280 EGRIGEAMDMLEEMTEKGI--------EPTVYTYTVPISSLCDIGRVDDAINLVRSMGKK 331

Query: 410 GVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G    V  +  +I G  + G  + A  +   M + G+  +   Y  LI     +G    A
Sbjct: 332 GCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIA 391

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
               D M   G    +  +  +++ LF    ++ A  V   M++ G    +     ++  
Sbjct: 392 LKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVE 451

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
            L RG++  A   + +M +S   P+   +  L+S   + GK  +A       L      +
Sbjct: 452 NLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPN 511

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
             +Y  ++D     GK   A S+  ++ E G     ++ + +I+GL++     +A+
Sbjct: 512 QWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAE 567



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 4/241 (1%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L +    N A  I  +M KK    +   +  LI    ++G V  + +    +
Sbjct: 584 TYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAER----L 639

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G E ++ +Y  L   + R GR   A +    M  +G+ P+   Y  +L     SLK+
Sbjct: 640 TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKV 699

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+  F  M  +G    +  Y  +I       + +EA  +F  + +K     +I +T +
Sbjct: 700 DCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVL 759

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G +    +D  ++    M+S +  P+  TY  L   L   GK +   ++   + E  +
Sbjct: 760 VDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLREVSL 819

Query: 298 P 298
           P
Sbjct: 820 P 820


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 259/557 (46%), Gaps = 19/557 (3%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           AG       T+  +I    R G+L+     L ++ KKG + D   F  L++         
Sbjct: 85  AGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTS 144

Query: 109 ESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE---GIEPTRHTY 164
           +++ I    M +LG    V SY+ L K +    R   A    + M  +   G  P   +Y
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N +L GFF     + A   + +M  RGI  DVVTY+++I    + + MD+A ++   M +
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
             + P  ++Y +++ GY +  +  +A+    +M+S  V+PN VTY++L+  LC  G+  E
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +K+   M +R + P D + +  LL      G L     +L  M+R  I  +   + ILI
Sbjct: 325 ARKIFDSMTKRGLEP-DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             + K E  D+A+ +  K+         Q  L+     Y  +I  LC +G    A ++F 
Sbjct: 384 CAYAKQEKVDQAMLVFSKM--------RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435

Query: 405 QLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           Q++ +G L P  + + +LI G       D A E++  M  RG+  +   +  +I+S+ ++
Sbjct: 436 QMIDEG-LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G   +++   D M+  G  P    + ++++     G++  A++++ SMV  GVK ++   
Sbjct: 495 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 554

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLG 579
             ++        +++AL     M+ SG  PN   ++ +L  L    +T AA +L      
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614

Query: 580 RDCIIDLASYEKVLDAL 596
               ++L++Y  +L  L
Sbjct: 615 SGTQLELSTYNIILHGL 631



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 132/548 (24%), Positives = 241/548 (43%), Gaps = 38/548 (6%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V N      +S+ A   +  +   G+   D  T+  +I  L +   ++ A  +L  M
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGIL-PDVVTYSSIIAALCKAQAMDKAMEVLNTM 262

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K GV  D   +  ++  Y   G  +E++     M+  GVE +V +Y +L   + + GR 
Sbjct: 263 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRS 322

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A++ F+ M   G+EP   TY  +L G+     L       + M   GI  D   +N +
Sbjct: 323 TEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNIL 382

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  Y + +K+D+A  +F++M++  + P V+ Y T+I         DDA+  F++M    +
Sbjct: 383 ICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGL 442

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSGHLNAA 321
            PN + YT+L+ GLC   K  + ++++ EM++R I    N++F   ++   CK G +  +
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL--NTIFFNSIIDSHCKEGRVIES 500

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE---------------- 365
             +   M+R+ +  +   Y  LI+  C A   D A KLL  +V                 
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560

Query: 366 --------------KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
                         KE++    S +     +YN ++Q L H  +T  A+  +  + K G 
Sbjct: 561 YCRVSRMDDALALFKEMV---SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT 617

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            L+   +N ++ G  K    D A  + + +    +  +   +  +I + L+ G   +AK 
Sbjct: 618 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 677

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
              +   +G  P    +  + E+L E G ++    +  SM E G   +  ++  I+  LL
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737

Query: 531 MRGHVEEA 538
            RG +  A
Sbjct: 738 QRGDITRA 745



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 146/616 (23%), Positives = 259/616 (42%), Gaps = 59/616 (9%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM---KQLGVERSVKSYDALFK 134
           +L  M + G   D   +  L++    +   QE++++  +M   +  G    V SY+ +  
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
              + G    A   +++ML  GI P   TY+ ++     +  ++ A+     M   G+  
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D +TYN++++GY    +  EA     +M+   +EP V++Y++++       R+ +A +IF
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL----- 309
           D M    ++P+  TY  LL G    G +VE+  +L  MV   I P D+ VF  L+     
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP-DHHVFNILICAYAK 388

Query: 310 ------------------------------GVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
                                          V CKSG ++ A    + MI   +      
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI   C  + +D+A +L+ +++++ I L            +N +I   C  G+  ++
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICL--------NTIFFNSIIDSHCKEGRVIES 500

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           E  F  +++ GV  D + +N LI G    G  D A +++  M   GV  D   Y  LI  
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           Y R     DA      M+  G SP    +  +++ LF   R   A  +  S+ + G +  
Sbjct: 561 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 620

Query: 519 LDLVAKILEALLMRGHVEEAL------GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
           L     IL  L      +EAL         DL +++ +   F+ ++  L + G+   A  
Sbjct: 621 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT---FNIMIGALLKCGRMDEAKD 677

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGL 631
           L         + D+ +Y  + + L+  G +L     LF  ME+ G + D +  + ++  L
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQG-SLEELDDLFLSMEENGCSADSRMLNSIVRKL 736

Query: 632 NQEGNTKQADILSRMI 647
            Q G+  +A     MI
Sbjct: 737 LQRGDITRAGTYLFMI 752



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 217/468 (46%), Gaps = 17/468 (3%)

Query: 28  NVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGV 87
           N L     S  A + F  + + GL   D  T+  +++     G L     +L  M + G+
Sbjct: 314 NYLCKNGRSTEARKIFDSMTKRGL-EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
           Q D  +F +LI +Y K+  V +++ +F  M+Q G+  +V  Y  +  ++ + G    A  
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           YF +M+ EG+ P    Y  ++ G     K + A     +M  RGI L+ + +N++I+ + 
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           +  ++ E+EKLF  M    ++P +I+Y T+I G     + D+A ++   M S  VKP+ V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           TY  L+ G C   +M +   + +EMV   + P   +  + L G+   +    AA ++  +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF-HTRRTAAAKELYVS 611

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           + +     E   Y I++   CK  + D A+++   L   +        L +E  ++N MI
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--------LQLETRTFNIMI 663

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             L   G+  +A+  F      G++  V  ++ +     ++G+ +   ++   M   G  
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGH-----SPASSLFRS 489
            D+     ++   L++G+   A T L  MI++ H     S AS L  S
Sbjct: 724 ADSRMLNSIVRKLLQRGDITRAGTYL-FMIDEKHFSLEASTASFLLES 770



 Score = 42.7 bits (99), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 41/196 (20%), Positives = 89/196 (45%), Gaps = 11/196 (5%)

Query: 464 EPADAKTALDSMIEDGH---SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
            PA A +  + M   G    +P    +  ++      GR+      + ++V+KG + +  
Sbjct: 69  SPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAI 128

Query: 521 LVAKILEALLMRGHVEEALGRI-DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
               +L+ L       +A+  +   M + G +P+   +++LL  L ++ ++  A++LL  
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 577 CL---GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                G     D+ SY  VL+     G +  AYS   +++++G + D  +   +IA L +
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248

Query: 634 -EGNTKQADILSRMIR 648
            +   K  ++L+ M++
Sbjct: 249 AQAMDKAMEVLNTMVK 264


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 233/486 (47%), Gaps = 14/486 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F +L+ ++  KG + +++     M+  G+     +Y+ L     R+G    A+    +M 
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMK 271

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            EGI PTR TYN ++  +     ++ A    E M + G   D+ TYN +  G  +  K+D
Sbjct: 272 KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 331

Query: 214 EAEKLFAEMKEKNI-EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           EA KL  EM++  I  P V++Y T++      +R+ DAL + +EM+   VK + VT+  +
Sbjct: 332 EAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNII 391

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GLC  G++ E    L  M E  + P D   +  L+   CK+G++  A  ++  M+R  
Sbjct: 392 VKGLCREGQLEEALGRLEMMTEEGLTP-DVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +      L+ N CK + Y+ A +LL           PQ     +  SY  ++     
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEAEELLRA--------PPQRGFVPDEVSYGTVMAAYFK 502

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +   A   + +++K+ +   ++ +N LI+G S  G    A + +  +   G+  D   
Sbjct: 503 EYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTT 562

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  +I +Y ++G+   A    + M+E+   P      ++M  L   GR++ A ++ +S V
Sbjct: 563 YNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWV 622

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           EKG K ++     +++AL     V+ AL     M   G  P+   ++ LLS LSE G+++
Sbjct: 623 EKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSV 682

Query: 569 AAVKLL 574
            A K+L
Sbjct: 683 EAQKML 688



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 143/570 (25%), Positives = 259/570 (45%), Gaps = 19/570 (3%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L  A   L  M   G+  D   +  L+ ++ +KG++ E+  +   MK+ G+  +  +Y
Sbjct: 223 GTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATY 282

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     R G    A      M + G EP   TYNV+  G   + K++ A +  ++M+ 
Sbjct: 283 NTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQ 342

Query: 190 RGI-SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            GI S DVVTYNT+++   + ++  +A  L  EM+EK ++ +++++  ++KG     + +
Sbjct: 343 LGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLE 402

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +AL   + M    + P+ +TY  L+   C AG + +   ++ EMV   +   D      L
Sbjct: 403 EALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGL-KMDTFTLNTL 461

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           L   CK      A ++L+A  +     +   YG ++  + K    + A+ L D++++++ 
Sbjct: 462 LYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRK- 520

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKE 427
                  L    S+YN +I+ L   G+  +A     +LM+ G V D   +N +I  + KE
Sbjct: 521 -------LTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKE 573

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G+ + AF+    M       D      L+      G    A    +S +E G       +
Sbjct: 574 GDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITY 633

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            +++++L +D  V TA R    M  +G++ ++     +L AL   G   EA   +  + +
Sbjct: 634 NTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNE 693

Query: 548 SGSV------PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           SG +      P+  S +  + E GK    VK     +G     D  SY K +  L   G+
Sbjct: 694 SGKLYGRFFYPSIKSSVEAV-ETGKD-PEVKSDIESVGNTQGDDQESYNKYIKELCIGGQ 751

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
              A ++L ++M+KG   D  +   L+ GL
Sbjct: 752 LKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 135/563 (23%), Positives = 245/563 (43%), Gaps = 68/563 (12%)

Query: 97  LIESYGKKGIVQESVKIFD-IMKQLGVERSVK---SYDALFKLILRRGRYMMAKRYFNKM 152
           L+ S+ ++G V+ S++  + ++  L    S     S DA   LI  R             
Sbjct: 158 LLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALR------------- 204

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
               + P  +T+N+++        L  A+     M+  G+S D VTYNT++N + R   +
Sbjct: 205 ----LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGML 260

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            EA  L A MK++ I PT  +Y T++  Y  +     A  + + M +F  +P+  TY  L
Sbjct: 261 GEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVL 320

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL----------------------G 310
             GLC AGK+ E  K+  EM +  I   D   +  L+                      G
Sbjct: 321 AAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKG 380

Query: 311 VQ-------------CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           V+             C+ G L  A   L+ M    +  +   Y  LI+  CKA    +A 
Sbjct: 381 VKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAF 440

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVA 416
            L+D++V        +S L M+  + N ++ +LC   +  +AE   R   ++G V D V+
Sbjct: 441 VLMDEMV--------RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVS 492

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  ++  + KE  P+ A  +   M +R +      Y  LI+     G+  +A   L+ ++
Sbjct: 493 YGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELM 552

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           E G  P  + +  ++ +  ++G ++ A +    MVE   K ++     ++  L + G +E
Sbjct: 553 EMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLE 612

Query: 537 EALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           +A+   +  ++ G    V  +++L+  L +      A++       R    D+ +Y  +L
Sbjct: 613 KAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLL 672

Query: 594 DALLAAGKTLNAYSILFKIMEKG 616
            AL  AG+++ A  +L K+ E G
Sbjct: 673 SALSEAGRSVEAQKMLHKLNESG 695



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 130/538 (24%), Positives = 226/538 (42%), Gaps = 85/538 (15%)

Query: 56  RETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD 115
           R T+  ++    R+G +  A  ++  M   G + D   + VL     + G V E+ K+ D
Sbjct: 279 RATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKD 338

Query: 116 IMKQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            M+QLG V   V +Y+ L     +  R   A     +M  +G++ +  T+N+++ G    
Sbjct: 339 EMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCRE 398

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMING----------------------------- 205
            +LE A+   E M   G++ DV+TYNT+I+                              
Sbjct: 399 GQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTL 458

Query: 206 ----YN--RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
               YN  + K+ +EAE+L     ++   P  +SY T++  Y    + + AL ++DEM  
Sbjct: 459 NTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIK 518

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+  TY  L+ GL   GK+ E    L E++E  + P D +                
Sbjct: 519 RKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTT---------------- 562

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
                               Y I+I  +CK    ++A +  +K+VE     +P      +
Sbjct: 563 --------------------YNIIIHAYCKEGDLEKAFQFHNKMVENS--FKP------D 594

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             + N ++  LC  G+  KA   F   ++KG  +D + +N LI+   K+ + D+A     
Sbjct: 595 VVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFA 654

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL--FE 496
            M  RG+  D   Y  L+ +    G   +A+  L  + E G       + S+  S+   E
Sbjct: 655 DMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVE 714

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-SVPN 553
            G+       ++S V     ++ +   K ++ L + G ++EA   +D MMQ G SV N
Sbjct: 715 TGKDPEVKSDIES-VGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDN 771



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/511 (21%), Positives = 228/511 (44%), Gaps = 21/511 (4%)

Query: 2   AERAWTTRLQNKIRALVP-QFDHNL-VYNVLHG----AKNSEHALQFFRWVERAGLFNHD 55
           A   W  +  + + A+    F+ +L  YNVL      A   + A +    +E+ G+ + D
Sbjct: 290 ARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPD 349

Query: 56  RETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD 115
             T+  +++   +  + + A  +L +M +KGV+       ++++   ++G ++E++   +
Sbjct: 350 VVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLE 409

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           +M + G+   V +Y+ L     + G    A    ++M+  G++    T N +L+      
Sbjct: 410 MMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 469

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           + E A         RG   D V+Y T++  Y +  K + A  L+ EM ++ + P++ +Y 
Sbjct: 470 RYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYN 529

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           T+IKG   + +  +A+   +E+    + P+  TY  ++   C  G + +  +   +MVE 
Sbjct: 530 TLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVEN 589

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P D      L+   C  G L  A  + ++ +      +   Y  LI+  CK    D 
Sbjct: 590 SFKP-DVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDT 648

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           A++    +  +   L+P      +  +YN ++  L   G++ +A+    +L + G L   
Sbjct: 649 ALRFFADMEVRG--LQP------DVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGR 700

Query: 416 AFNNLIRGHSKE----GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            F   I+   +      +P+   +I  +   +G   D ++Y   I+     G+  +AK  
Sbjct: 701 FFYPSIKSSVEAVETGKDPEVKSDIESVGNTQG--DDQESYNKYIKELCIGGQLKEAKAV 758

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           LD M++ G S  +S + ++ME L +  + QT
Sbjct: 759 LDEMMQKGMSVDNSTYITLMEGLIKRQKRQT 789


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 152/631 (24%), Positives = 281/631 (44%), Gaps = 31/631 (4%)

Query: 44  RWVERAGLFNHDRETHL--KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           R V+RA       + +L  K+I  L R G+ + A  +L    + G   D   +  L+  Y
Sbjct: 95  RLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGY 154

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
            + G +  + ++   M    V     +Y  + + +  RGR   A    + ML  G +P+ 
Sbjct: 155 CRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
            TY V+L     S     A+   ++M+++G + ++VTYN +ING  R  ++D+A +    
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 271

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           +     +P  +SYTT++KG  A +R +D   +F EM   +  PN VT+  L+   C  G 
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           +    +VL +M   +    + ++   ++   CK G ++ A   L  M       +   Y 
Sbjct: 332 VERAIQVLEQM-SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 390

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            +++  C+AE ++ A +LL ++V K     P + +     ++N  I  LC  G   +A +
Sbjct: 391 TVLKGLCRAERWEDAKELLKEMVRKNC---PPNEV-----TFNTFICILCQKGLIEQATM 442

Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
              Q+ + G  ++ V +N L+ G   +G  DSA E+   M  +    +   Y  L+    
Sbjct: 443 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGLC 499

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
                  A   L  M++   +P    F  ++    + G +  A  +++ M+E G   NL 
Sbjct: 500 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 559

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL--- 574
               +L+ +    + EEAL  +  ++ +G  P+   + S++ VLS + +   A+K+    
Sbjct: 560 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 619

Query: 575 -DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
            D  +    +I    Y K+L AL     T  A      ++  G + +  +   LI GL  
Sbjct: 620 QDLGMRPKAVI----YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLAN 675

Query: 634 EGNTKQA-DILSRMI-RGEMSRGSQKEKKQK 662
           E   K+  D+L  +  RG +++   +E + K
Sbjct: 676 EDFLKETRDLLRELCSRGVLNKNLLEEWRPK 706



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/497 (22%), Positives = 221/497 (44%), Gaps = 13/497 (2%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A R  ++  S G  P  +    ++       +   A R     +  G ++DV  YNT++ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           GY R+ ++D A +L A M    + P   +YT +I+G     R  +AL + D+M     +P
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + VTYT LL  +C +    +  +VL EM  +   P +   +  ++   C+ G ++ A + 
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP-NIVTYNVIINGMCREGRVDDAREF 268

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L  +       +   Y  +++  C A+ ++   +L  +++EK  +   + T DM      
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN-EVTFDM------ 321

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL-IRGHSKEGNPDSAFEIVKIMGRR 443
            +++  C  G   +A     Q+   G        N+ I    K+G  D AF+ +  MG  
Sbjct: 322 -LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   D  +Y  +++   R     DAK  L  M+     P    F + +  L + G ++ A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
           + +++ M E G + N+     ++    ++G V+ AL     M    +   + +LL+ L  
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCN 500

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
             +  AA +LL   L +DC  ++ ++  ++      G    A  ++ ++ME G   +  +
Sbjct: 501 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 560

Query: 624 SDKLIAGLNQEGNTKQA 640
            + L+ G+ ++ N+++A
Sbjct: 561 YNTLLDGITKDCNSEEA 577


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 225/486 (46%), Gaps = 10/486 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G++     +  L++SY K G VQ+ + +   M++ G   +  +Y+ L   + ++G 
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  AK    +ML  G++ + +TYN +++G+F    L  A+   E+M  +G S  V TYN+
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            I G  +  +M +A +  ++M   N+ P V+SY T+I GY  +     A  +FDE++S  
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P  VTY  LL GLC  G++   Q++  EM+   I P D   +  L+   CK G L+ A
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP-DIVTYTILVNGSCKMGSLSMA 463

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            +    M+   +  ++  Y   I    K     RA  L ++++ K     P   +     
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG--FPPDLII----- 516

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            YN ++  LC  G   +A    ++++  GV+ D V + ++I  H + G      EI   M
Sbjct: 517 -YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEM 575

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G+      Y  LI  +  KG    A      M E G  P    + S++  L +  R+
Sbjct: 576 LSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRM 635

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
             A      MVEKG+  N      ++      G+ +EAL     M+  G  P+  +  ++
Sbjct: 636 DQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSAL 695

Query: 561 LSEKGK 566
           L + GK
Sbjct: 696 LKQLGK 701



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 144/648 (22%), Positives = 288/648 (44%), Gaps = 28/648 (4%)

Query: 22  DHNLVYNVLHGAKNSEH-ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL- 79
           D +L   VL   + S   AL+ FRW E    F         ++EIL +   +  A  ++ 
Sbjct: 80  DPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVME 139

Query: 80  ----------LDMPKKGVQWDE---DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
                     +D+   G    E    + ++LI  Y KK +V++ + +FD M +  +   V
Sbjct: 140 RVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDV 199

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           K+ + + +++  +     A   +  M   GI+PT  TYN +L  +    K++  +    +
Sbjct: 200 KNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSE 259

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M+ RG + + VTYN +ING ++  + ++A+ L  EM +  ++ +  +Y  +I GY     
Sbjct: 260 MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGM 319

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
             +AL + +EM      P   TY + + GLC  G+M +  + L +M+   + P D   + 
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP-DVVSYN 378

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+   C+ G+L  A  +   +  + +      Y  L++  C+    + A +L  +++ +
Sbjct: 379 TLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINE 438

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHS 425
            I   P      +  +Y  ++   C  G    A+ FF +++ +G+ LD  A+   I G  
Sbjct: 439 GI--AP------DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K G+   AF + + M  +G P D   Y  +++   + G   +A   L  M+ DG  P   
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            + S++ +  E+GR++    +   M+ KG+  ++     ++     +G +E A      M
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
            + G +PN   ++SL++ L +  +   A       + +    +  SY  +++     G  
Sbjct: 611 QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
             A S+  +++++G   D  +   L+  L ++   +    L  ++  E
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLDSE 718


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/563 (25%), Positives = 241/563 (42%), Gaps = 50/563 (8%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F VLI+     G+++E+ + F  MK+  V    +S + L     + G+    KR+F  M
Sbjct: 69  LFSVLID----LGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 124

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G +PT  TYN+M+   +    +E A   FE+MK RG+  D VTYN+MI+GY +  ++
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D+    F EMK  + EP VI+Y ++I  +    +    L  + EMK   +KPN V+Y+ L
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTL 244

Query: 273 LPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           +   C    M +  K   +M    ++P  +   +  L+   CK G+L+ A  +   M+ +
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVP--NEFTYTSLVDANCKIGNLSDAFRLANEMLEV 302

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            +      Y  LI+  C AE    A KL  K+V   +I           +SYN +I    
Sbjct: 303 GVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVI--------PNLASYNALIHGFV 354

Query: 392 HNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
                 +A     +L  +G+  D + +   I G       ++A  ++  M   G+  +  
Sbjct: 355 KAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTL 414

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  L+++Y + G P +    L+ M E  H      F  +++ L ++  V  A      M
Sbjct: 415 IYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRM 474

Query: 511 VEK-GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA 569
               G++ N  +   +++ L     V+ A    + M Q G VP                 
Sbjct: 475 SNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVP----------------- 517

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
                          D  +Y  ++D  L  G  L A ++  K+ E G   D  +   L+ 
Sbjct: 518 ---------------DRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVW 562

Query: 630 GLNQEGNTKQA-DILSRMIRGEM 651
           G +Q    ++A   L  MI  E+
Sbjct: 563 GFSQCNQLQKARSFLEEMIGEEI 585



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 140/587 (23%), Positives = 265/587 (45%), Gaps = 45/587 (7%)

Query: 6   WTTRLQNKIRALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           W+TR        VP F   + +++VL      E A Q F  ++R  +F   R  +  ++ 
Sbjct: 53  WSTR-----NVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCN-GLLH 106

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
              ++GK +  +    DM   G +     + ++I+   K+G ++ +  +F+ MK  G+  
Sbjct: 107 KFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIP 166

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
              +Y+++     + GR      +F +M S   EP   TYN ++  F  S KL   + F+
Sbjct: 167 DTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFY 226

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +MK  G+  +VV+Y+T+++ + +   M +A K + +M+     P   +YT+++     +
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKI 286

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
               DA R+ +EM    V+ N VTYTAL+ GLCDA +M E +K+  +MV   + P   S 
Sbjct: 287 GNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLAS- 345

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+    K+ +++ A ++L  +    I  +   YG  I   C  E  + A  +++++ 
Sbjct: 346 YNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQ 405

Query: 365 EKEI-------------------------ILRPQSTLDMEAS--SYNPMIQHLCHNGQTG 397
           E  I                         +L     LD E +  ++  +I  LC N    
Sbjct: 406 ENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVS 465

Query: 398 KAEIFFRQLMKKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
           KA  +F ++     L P A  +  +I G  KE    +A  + + M + G+  D  AY  L
Sbjct: 466 KAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSL 525

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           ++  L++G   +A    D M E G       + S++    +  ++Q A   ++ M+ + +
Sbjct: 526 MDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEI 585

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQ--------SGSVPNF 554
             +  L   +L+     G ++EA+G    +M+        + ++PN+
Sbjct: 586 LPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLLTSDNNNALPNY 632


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/606 (23%), Positives = 273/606 (45%), Gaps = 22/606 (3%)

Query: 47  ERAGL---FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGK 103
           +RAG    ++H  +    +I+ LG VG       +L  M  +G+ + E +F ++++ YGK
Sbjct: 87  QRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGK 146

Query: 104 KGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
            G+  ++ ++  D+      + + KSY+ +  +++      +A   F  MLS G+ PT +
Sbjct: 147 AGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVY 206

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           T+ V++    +  ++++A     DM   G   + V Y T+I+      ++ EA +L  +M
Sbjct: 207 TFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDM 266

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
                EP V ++  +I G     R  +A ++ D M       +A+TY  L+ GLC  G++
Sbjct: 267 FLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQV 326

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL-KAMIRLSIPTEAGHYG 341
            E + +L +     IP  +  ++  L+     SG    A D+L   M+      +A  + 
Sbjct: 327 DEARALLNK-----IPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFN 381

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
           I+I+   K      A++LL+++V K          +    +Y  +I   C  G+  +A  
Sbjct: 382 IMIDGLVKKGYLVSALELLNEMVAKR--------FEPNVITYTILINGFCKQGRLEEAAE 433

Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
               +  KG+ L+ V +N LI    K+GN + A ++   M  +G   D   +  LI    
Sbjct: 434 IVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLC 493

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           +  +  +A +    M  +G    +  + +++ +      +Q A +++  M+ +G   +  
Sbjct: 494 KNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNI 553

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFC 577
               +++AL   G VE+ LG  + M+  G  P   S   L+S L   GK   A+K L   
Sbjct: 554 TYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM 613

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
           + R    D+ +Y  +++ L   G    A ++  K+  +G   D  + + LI+    EG  
Sbjct: 614 IHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMF 673

Query: 638 KQADIL 643
             A +L
Sbjct: 674 NDACLL 679



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 154/318 (48%), Gaps = 1/318 (0%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           +  D  T   MI+ L + G L  A  +L +M  K  + +   + +LI  + K+G ++E+ 
Sbjct: 373 YEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAA 432

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           +I + M   G+  +   Y+ L   + + G    A + F +M  +G +P  +T+N ++ G 
Sbjct: 433 EIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGL 492

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + K+E A+  + DM   G+  + VTYNT+++ +     + +A KL  EM  +      
Sbjct: 493 CKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDN 552

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I+Y  +IK        +  L +F+EM    + P  ++   L+ GLC  GK+ +  K L++
Sbjct: 553 ITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQD 612

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M+ R + P D   +  L+   CK GH+  A+++   +    I  +A  Y  LI   C   
Sbjct: 613 MIHRGLTP-DIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEG 671

Query: 352 MYDRAIKLLDKLVEKEII 369
           M++ A  LL K V+   I
Sbjct: 672 MFNDACLLLYKGVDSGFI 689



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 185/418 (44%), Gaps = 47/418 (11%)

Query: 28  NVLHGAKNSEHALQFFRWVERAGL--FNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           +V+HG   +    +  + ++R  L  F+ D  T+  ++  L R+G+++ AR +L  +P  
Sbjct: 280 DVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNP 339

Query: 86  --------------------------------GVQWDEDMFEVLIESYGKKGIVQESVKI 113
                                           G + D   F ++I+   KKG +  ++++
Sbjct: 340 NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALEL 399

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
            + M     E +V +Y  L     ++GR   A    N M ++G+      YN ++     
Sbjct: 400 LNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCK 459

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
              +E A++ F +M  +G   D+ T+N++ING  +  KM+EA  L+ +M  + +    ++
Sbjct: 460 DGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVT 519

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y T++  ++  +    A ++ DEM       + +TY  L+  LC  G + +   +  EM+
Sbjct: 520 YNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEML 579

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
            + I P   S  + + G+ C++G +N A   L+ MI   +  +   Y  LI   CK    
Sbjct: 580 GKGIFPTIISCNILISGL-CRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHV 638

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             A  L +KL  + I  RP      +A +YN +I   CH G    A +    L+ KGV
Sbjct: 639 QEASNLFNKLQSEGI--RP------DAITYNTLISRHCHEGMFNDACL----LLYKGV 684



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 1/251 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N +   L    N E ALQ F  +   G    D  T   +I  L +  K+  A  +  DM
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGC-KPDIYTFNSLINGLCKNHKMEEALSLYHDM 508

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +GV  +   +  L+ ++  +  +Q++ K+ D M   G      +Y+ L K + + G  
Sbjct: 509 FLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAV 568

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 F +ML +GI PT  + N+++ G   + K+  A++F +DM  RG++ D+VTYN++
Sbjct: 569 EKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSL 628

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING  +   + EA  LF +++ + I P  I+Y T+I  +      +DA  +  +      
Sbjct: 629 INGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGF 688

Query: 263 KPNAVTYTALL 273
            PN VT++ L+
Sbjct: 689 IPNEVTWSILI 699



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 1/238 (0%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + G +  A  +  +M  KG + D   F  LI    K   ++E++ ++  M   G
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  +  +Y+ L    L R     A +  ++ML  G      TYN ++     +  +E  +
Sbjct: 513 VIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGL 572

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             FE+M  +GI   +++ N +I+G  R  K+++A K   +M  + + P +++Y ++I G 
Sbjct: 573 GLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGL 632

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIP 298
             +    +A  +F++++S  ++P+A+TY  L+   C  G   +   +L + V+  +IP
Sbjct: 633 CKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIP 690


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 247/526 (46%), Gaps = 32/526 (6%)

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V + + +   +  +G+   A+    KM +  + P   TYN +L  +    + ++A+R  +
Sbjct: 230 VTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILD 288

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           DM+  GI  D+ TYN MI+   + K+   A  L   M+E N+ P   SY T+I G+    
Sbjct: 289 DMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEG 348

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           + + A+ IF++M    +KP+  TYTAL+ G C  G+  E ++VL EM    + P++    
Sbjct: 349 KINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPRE---- 404

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
                       ++ A  +LK M+   I  +   Y  LI   CK  M     ++L ++ +
Sbjct: 405 ------------VSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQK 452

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGH 424
             ++  P + L      Y  ++ + C  G   +A  +F  + + G V + V  N L+   
Sbjct: 453 SGVL--PNNVL------YTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSF 504

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            +EG    A +  + M R  +  D  ++ C+I+SY ++G   +A +  D+M+  G  P  
Sbjct: 505 YREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDI 564

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             + S++  L + G +  A   M  ++EK    +   +  +L  +   G ++EAL   + 
Sbjct: 565 CTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEK 624

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M+    +P+   +  LL    ++GK + A+ LL   L +  + D  +Y  +L+ L+  G+
Sbjct: 625 MVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 684

Query: 602 TLNAYSILFK--IMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            + A S +F+  I ++G   D  + + ++ G  + G   + + L R
Sbjct: 685 -VKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMR 729



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 136/582 (23%), Positives = 270/582 (46%), Gaps = 33/582 (5%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+   R G+ + AR +L +M   GV+  E               V ++ +I   M
Sbjct: 371 TYTALIDGYCRNGRTDEARRVLYEMQITGVRPRE---------------VSKAKQILKCM 415

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G++  V +Y AL   + + G     K   ++M   G+ P    Y  +++ F  +   
Sbjct: 416 LADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHA 475

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+++F D+   G+  + V +N ++  + R   + EAE+    M    I   V S+  +
Sbjct: 476 KEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCI 535

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  Y       +A  ++D M      P+  TY +LL GLC  G +V+ ++ +  ++E+  
Sbjct: 536 IDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKAC 595

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              + ++   L+G+ CK G L+ A D+ + M+  +I  +   Y IL++ FCK      A+
Sbjct: 596 AIDEKTLNTLLVGI-CKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPAL 654

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL--DPV 415
            LL  ++EK ++  P +       +Y  ++  L + GQ   A   F++++ K  L  D +
Sbjct: 655 ILLQMMLEKGLV--PDTI------AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCI 706

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           A+N+++ G+ K G  +    +++ M    V   + +Y  L+  Y++KG+ +        M
Sbjct: 707 AYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDM 766

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV--EKGVKENLDLVAKILEALLMRG 533
           +++G  P +  +R ++  L E G ++ A + ++ MV  E G++        ++ A    G
Sbjct: 767 VKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVG 826

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            ++ A    + M   G VP+     S++  L + GK   A+ +    +    +  +A++ 
Sbjct: 827 DIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFT 886

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGL 631
            ++  L    K  +A+  L ++ME  G+  D  + + LI GL
Sbjct: 887 TLMHGLCKEFKIDDAFH-LKQLMESCGLKVDVVTYNVLITGL 927



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 128/540 (23%), Positives = 233/540 (43%), Gaps = 35/540 (6%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           F  N + N L G   SE+   F +  ++R   F  D  T   ++  L   GKL+ A  +L
Sbjct: 196 FSCNNILNALVGINKSEYVWLFLKESLDRK--FPLDVTTCNIVLNSLCTQGKLSKAESML 253

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             M K     +   +  ++  Y KKG  + +++I D M++ G+E  + +Y+ +   + + 
Sbjct: 254 QKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKL 312

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
            R   A     +M    + P   +YN ++ GFF   K+  AI  F  M  + +   V TY
Sbjct: 313 KRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATY 372

Query: 200 NTMINGYNRFKKMDEAEKLFAEMK--------------------EKNIEPTVISYTTMIK 239
             +I+GY R  + DEA ++  EM+                       I+P VI+Y+ +I 
Sbjct: 373 TALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALIN 432

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G   +    +   I   M+   V PN V YT L+   C AG   E  K   + + R    
Sbjct: 433 GMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD-IYRSGLV 491

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            ++ +   LL    + G +  A    + M R+ I  +   +  +I+++C+      A  +
Sbjct: 492 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 551

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
            D +V        +     +  +Y  +++ LC  G   +A+ F   L++K   +D    N
Sbjct: 552 YDNMV--------RHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLN 603

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L+ G  K G  D A ++ + M  R +  D   Y  L++ + ++G+   A   L  M+E 
Sbjct: 604 TLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEK 663

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK-GVKENLDLVAKILEALLMRGHVEE 537
           G  P +  +  ++  L  +G+V+ AS + + ++ K G+  +      ++   L  G + E
Sbjct: 664 GLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 723



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 218/514 (42%), Gaps = 67/514 (13%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + G    A    +D+ + G+  +  +   L+ S+ ++G++ E+ +    M ++ +   V 
Sbjct: 471 KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVA 530

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           S++ +     +RG  + A   ++ M+  G  P   TY  +L G      L  A  F   +
Sbjct: 531 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 590

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
             +  ++D  T NT++ G  +   +DEA  L  +M  +NI P   +YT ++ G+    + 
Sbjct: 591 LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKI 650

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCD----------------------------- 278
             AL +   M    + P+ + YT LL GL +                             
Sbjct: 651 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 710

Query: 279 -------AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
                   G++ E+++++R M E  + P   S  + + G   K G L+    + + M++ 
Sbjct: 711 MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG-YIKKGQLSRTLYLYRDMVKE 769

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL--------------- 376
            I  +   Y +LI   C+  + + A+K L+K+V +E  L+P+ T                
Sbjct: 770 GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDID 829

Query: 377 -------DMEASSYNP-------MIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLI 421
                  DM+A    P       +++ LC  G+  +A I F  +M+ G++  +A F  L+
Sbjct: 830 GAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLM 889

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G  KE   D AF + ++M   G+  D   Y  LI     K    DA    + M   G  
Sbjct: 890 HGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLL 949

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           P  + + ++  +++  G +Q   +++K + ++G+
Sbjct: 950 PNITTYITLTGAMYATGTMQDGEKLLKDIEDRGI 983



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 134/608 (22%), Positives = 261/608 (42%), Gaps = 52/608 (8%)

Query: 63  IEILG-RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++I G R  +++ A+ IL  M   G+  D   +  LI    K G++ E+ +I   M++ G
Sbjct: 395 MQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSG 454

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  +   Y  L     + G    A +YF  +   G+      +N +L  F+    +  A 
Sbjct: 455 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAE 514

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +F + M    IS DV ++N +I+ Y +   + EA  ++  M      P + +Y ++++G 
Sbjct: 515 QFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 574

Query: 242 VA--------------VERA---------------------DDALRIFDEMKSFDVKPNA 266
                           +E+A                     D+AL + ++M + ++ P+ 
Sbjct: 575 CQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT 634

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            TYT LL G C  GK+V    +L+ M+E+ + P D   +  LL      G + AA+ + +
Sbjct: 635 YTYTILLDGFCKRGKIVPALILLQMMLEKGLVP-DTIAYTCLLNGLVNEGQVKAASYMFQ 693

Query: 327 AMI-RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
            +I +  +  +   Y  ++  + K    +   +L+  + E E+   P S      +SYN 
Sbjct: 694 EIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY--PSS------ASYNI 745

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK--IMGR 442
           ++      GQ  +    +R ++K+G+  D V +  LI G  + G  + A + ++  ++  
Sbjct: 746 LMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEE 805

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G+      YI LI +  R G+   A    + M   G  P+     S++  L + G+V+ 
Sbjct: 806 SGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 865

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLS 559
           A  V  S++  G+   +     ++  L     +++A     LM   G    V  ++ L++
Sbjct: 866 AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLIT 925

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            L  K     A+ L +    +  + ++ +Y  +  A+ A G   +   +L  I ++G V 
Sbjct: 926 GLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 985

Query: 620 DWKSSDKL 627
            +K  + L
Sbjct: 986 SYKHPESL 993



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 119/531 (22%), Positives = 221/531 (41%), Gaps = 49/531 (9%)

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            I++Q G++R    Y     ++++            +M S+ +   RH   + L GF  S
Sbjct: 97  SIVQQSGLDRITHIYCMAVHILVQA-----------QMPSQAMSVLRH---LALTGFSCS 142

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
               + +R      SR    ++ + + ++N Y +  K+ +A      M E   + ++ S 
Sbjct: 143 AIFSSLLRTI----SRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSC 198

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++   V + +++       E        +  T   +L  LC  GK+ + + +L++M  
Sbjct: 199 NNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKN 258

Query: 295 RYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
             +P   N+V +  +L    K G   +A  +L  M +  I  +   Y I+I+  CK +  
Sbjct: 259 CRLP---NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRS 315

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
            RA  LL ++  +E+ L P      +  SYN +I      G+   A   F Q++++ +  
Sbjct: 316 ARAYLLLKRM--REVNLTP------DECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKP 367

Query: 414 PVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
            VA +  LI G+ + G  D A  ++  M   GV               R  E + AK  L
Sbjct: 368 SVATYTALIDGYCRNGRTDEARRVLYEMQITGV---------------RPREVSKAKQIL 412

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M+ DG  P    + +++  + + G +     ++  M + GV  N  L   ++      
Sbjct: 413 KCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKA 472

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           GH +EAL     + +SG V N    ++LL     +G    A +   +        D+AS+
Sbjct: 473 GHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASF 532

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             ++D+    G  L A+S+   ++  G   D  +   L+ GL Q G+  QA
Sbjct: 533 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 583


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 169/694 (24%), Positives = 303/694 (43%), Gaps = 72/694 (10%)

Query: 14  IRALVPQFDHNL-VYNVLHGAKNSEHALQFFRWVER----AGLFNHDRETHLKMIEILGR 68
           +R+  P+   ++ +YN+L  +   E  ++F  W+ +     G+       +L +I  L  
Sbjct: 101 VRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNL-LIRALCD 159

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
              ++ AR +  +MP+KG + +E  F +L+  Y K G+  + +++ + M+  GV  +   
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGI------------------------------- 157
           Y+ +     R GR   +++   KM  EG+                               
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279

Query: 158 --------EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
                    P   TYN+ML GF     LE A   FE ++       + +YN  + G  R 
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
            K  EAE +  +M +K I P++ SY  ++ G   +    DA  I   MK   V P+AVTY
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
             LL G C  GK+   + +L+EM+     P   +  + LL    K G ++ A ++L+ M 
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI-LLHSLWKMGRISEAEELLRKMN 458

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKL-----------LDKLVEKEIILRPQSTLDM 378
                 +     I+++  C +   D+AI++           L  L    I L   S ++ 
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518

Query: 379 EA----SSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPDSA 433
                  +Y+ ++  LC  G+  +A+  F ++M +K   D VA+N  I    K+G   SA
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           F ++K M ++G  +  + Y  LI     K +  +    +D M E G SP    + + ++ 
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL------MRGHVEEALGRIDLMMQ 547
           L E  +V+ A+ ++  M++K +  N+     ++EA        M   V E    I    +
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE 698

Query: 548 SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
                 F+ LL+     G+ + A +LL+  L R   +    Y+ ++++L    +   A  
Sbjct: 699 GLYSLMFNELLAA----GQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754

Query: 608 ILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           IL K++++G   D  +   +I GL + GN K+A+
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEAN 788



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 113/512 (22%), Positives = 226/512 (44%), Gaps = 59/512 (11%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + ++++ + K G+++++  +F+ +++     S++SY+   + ++R G+++ A+    +M 
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +GI P+ ++YN+++ G      L  A      MK  G+  D VTY  +++GY    K+D
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A+ L  EM   N  P   +   ++     + R  +A  +  +M       + VT   ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473

Query: 274 PGLCDAG---KMVEVQKVLR--------EMVERYIPPKDNSV-----------FMKLLGV 311
            GLC +G   K +E+ K +R         +   YI   D+S+           +  LL  
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK----- 366
            CK+G    A ++   M+   +  ++  Y I I +FCK      A ++L  + +K     
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593

Query: 367 -----EIIL-----------------RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
                 +IL                   +  +     +YN  IQ+LC   +   A     
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653

Query: 405 QLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI----VKIMGRRGVPRDADAYICLIESY 459
           ++M+K +   V +F  LI    K  + D A E+    V I G++        Y  +    
Sbjct: 654 EMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK-----EGLYSLMFNEL 708

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
           L  G+   A   L+++++ G    + L++ ++ESL +   ++ AS ++  M+++G   + 
Sbjct: 709 LAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDP 768

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
             +  +++ L   G+ +EA    D MM+  SV
Sbjct: 769 AALMPVIDGLGKMGNKKEANSFADKMMEMASV 800



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 167/378 (44%), Gaps = 33/378 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L ++G+++ A  +L  M +KG   D     ++++     G + ++++I   M+  G
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496

Query: 122 -------------------VERS----VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
                              +E +    + +Y  L   + + GR+  AK  F +M+ E ++
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P    YN+ +  F    K+ +A R  +DM+ +G    + TYN++I G     ++ E   L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EMKEK I P + +Y T I+     E+ +DA  + DEM   ++ PN  ++  L+   C 
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
                  Q+V    V   I  +   ++  +      +G L  A ++L+A++         
Sbjct: 677 VPDFDMAQEVFETAVS--ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  L+E+ CK +  + A  +L K++++     P + +        P+I  L   G   +
Sbjct: 735 LYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALM--------PVIDGLGKMGNKKE 786

Query: 399 AEIFFRQLMKKGVLDPVA 416
           A  F  ++M+   +  VA
Sbjct: 787 ANSFADKMMEMASVGEVA 804



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 162/376 (43%), Gaps = 49/376 (13%)

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH---Y 340
           E+Q++   ++   I     S  + ++ +  KS H++ A    + ++R   P        Y
Sbjct: 57  EIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQ-LVRSRFPENKPSVYLY 115

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEII--LRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            +L+E+  K    +R ++ +  L +  ++  + PQ+       ++N +I+ LC +     
Sbjct: 116 NLLLESCIK----ERRVEFVSWLYKDMVLCGIAPQTY------TFNLLIRALCDSSCVDA 165

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A   F ++ +KG   +   F  L+RG+ K G  D   E++  M   GV  +   Y  ++ 
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
           S+ R+G   D++  ++ M E+G  P    F S + +L ++G+V  ASR+   M       
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM------- 278

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFC 577
                            ++E LG    + +  S+  ++ +L    + G    A  L +  
Sbjct: 279 ----------------ELDEYLG----LPRPNSI-TYNLMLKGFCKVGLLEDAKTLFESI 317

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
              D +  L SY   L  L+  GK + A ++L ++ +KG      S + L+ GL + G  
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377

Query: 638 KQADILSRMIRGEMSR 653
             A    + I G M R
Sbjct: 378 SDA----KTIVGLMKR 389


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 221/459 (48%), Gaps = 20/459 (4%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F  N V      + N E A + ++ +  +G +  D  ++  +I  L ++GKL+ +  IL 
Sbjct: 46  FAFNGVMQGFARSNNMEKAREVYQHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILS 104

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  +G       +  L+ +  K   V  +  +FD M + G       +  L   + + G
Sbjct: 105 EMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAG 164

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A   F +M   G +P    YNV+L G   S +LE A   F +MKS   S DVVTYN
Sbjct: 165 KVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYN 224

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++   + ++++E  KLF  M+     P VI+++T+I G       + AL +F  M   
Sbjct: 225 TLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 284

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             KPN  TYT L+ GLC A K+++ +++  +M +  IPP D   +  L+   CK G ++ 
Sbjct: 285 GCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPP-DAVAYNSLIAGYCKRGSMDE 343

Query: 321 AADVLKAM-----IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           A  + + M     ++ +I T    +  LI+ FCK     RA +L+ ++  K         
Sbjct: 344 AEKLYREMSGGAGLQPTIVT----FNTLIDGFCKLGKLGRANELVAEMGTK--------G 391

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPDSAF 434
           L  ++ +Y  +I  L    +  +A   ++Q+  KK +LDPV+  + + G  K GN D A+
Sbjct: 392 LAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAY 451

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + +   + G   + + +  L ES ++ G   DA+  ++
Sbjct: 452 AVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 219/486 (45%), Gaps = 17/486 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+ L +  K   +  +L +M   G   D   F  +++ + +   ++++ +++  M
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G +    SY  L   + + G+   + +  ++M+  G  P+   Y+ ++     + ++
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A   F++M   G   D + +  +I G  +  K+ +A + F +M +   +P V  Y  +
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERY 296
           + G  +  + + A  +F EMKS    P+ VTY  LL  +C A ++ E  K+   M    Y
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +P  +   F  L+   C++G L  A +V  +M+          Y  LI   C+AE   +A
Sbjct: 252 VP--NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQA 309

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            +L +K+         Q+ +  +A +YN +I   C  G   +AE  +R++     L P  
Sbjct: 310 RELFEKMT--------QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTI 361

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V FN LI G  K G    A E+V  MG +G+  D+  Y  LI    R  +  +A      
Sbjct: 362 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQ 421

Query: 475 MIEDGH--SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           M E      P S +  S +  L + G +  A  V ++  + G   N +    + E+L+  
Sbjct: 422 MREKKFLLDPVSCV--SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKL 479

Query: 533 GHVEEA 538
           G VE+A
Sbjct: 480 GRVEDA 485



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 226/508 (44%), Gaps = 20/508 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  K +  +   +  +I+S  K+   +ES K+ + M   G    V +++ + +   R   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A+  +  M+  G +P   +Y++++ G     KL+ +++   +M  RG +  +  Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++    + +++D A  LF EM      P  + +  +I G     +  DA   F +M    
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +PN   Y  LL GLC +G++ +   +  EM      P D   +  LL   CK+  +   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP-DVVTYNTLLDAVCKARRVEEG 239

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             + +AM           +  LI   C+    ++A+++   ++E     +P         
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGC--KPNKY------ 291

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y  +I  LC   +  +A   F ++ +  +  D VA+N+LI G+ K G+ D A ++ + M
Sbjct: 292 TYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351

Query: 441 -GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
            G  G+      +  LI+ + + G+   A   +  M   G +  S  +R ++  L    +
Sbjct: 352 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATK 411

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKI--LEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
           +  A  V K M EK  K  LD V+ +  +  L   G++++A    +   +SG+VPN ++ 
Sbjct: 412 LDEALEVYKQMREK--KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPET- 468

Query: 558 LSVLSEK----GKTIAAVKLLDFCLGRD 581
             +LSE     G+   A KL++    RD
Sbjct: 469 FRILSESLIKLGRVEDAQKLMEPAKARD 496



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 176/417 (42%), Gaps = 14/417 (3%)

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M++KNI   V +Y+++IK  V   + +++ ++ +EM +    P+   +  ++ G   +  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           M + ++V + MVE    P DN  +  L+    K G L+ +  +L  M+          Y 
Sbjct: 61  MEKAREVYQHMVESGYKP-DNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            L+    KA   D A  L D+++       P   +  E      +I  LC  G+   A  
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGG--HHPDRLMFYE------LILGLCQAGKVKDASE 171

Query: 402 FFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F+Q+ K G    V  +N L+ G    G  + A  +   M       D   Y  L+++  
Sbjct: 172 RFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVC 231

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           +     +     ++M   G+ P    F +++  L   G ++ A  V  SM+E G K N  
Sbjct: 232 KARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 291

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL-DF 576
               ++  L     V +A    + M Q+   P+   ++SL++   ++G    A KL  + 
Sbjct: 292 TYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
             G      + ++  ++D     GK   A  ++ ++  KG   D  +   LIAGL++
Sbjct: 352 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSR 408



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 137/297 (46%), Gaps = 3/297 (1%)

Query: 3   ERAWTTRLQNKIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E+A T   + K  +  P    +N + + +  A+  E   + F  +  AG +  +  T   
Sbjct: 202 EQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG-YVPNVITFST 260

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R G+L  A  +   M + G + ++  +  LI    +   V ++ ++F+ M Q  
Sbjct: 261 LIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQAC 320

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLS-EGIEPTRHTYNVMLWGFFLSLKLETA 180
           +     +Y++L     +RG    A++ + +M    G++PT  T+N ++ GF    KL  A
Sbjct: 321 IPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRA 380

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
                +M ++G++ D  TY  +I G +R  K+DEA +++ +M+EK      +S  + + G
Sbjct: 381 NELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGG 440

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
                  D A  +F+  +     PN  T+  L   L   G++ + QK++     R I
Sbjct: 441 LCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 497


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 171/704 (24%), Positives = 306/704 (43%), Gaps = 92/704 (13%)

Query: 14  IRALVPQFDHNL-VYNVLHGAKNSEHALQFFRWVERAGLF---NHDRETHLKMIEILGRV 69
           +R+  P+    + +YNVL  +   E  ++F  W+ +  +    + +  T   +I  L   
Sbjct: 101 VRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDS 160

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
             ++ AR +  +MP+KG + +E  F +L+  Y K G+  + +++ + M+  GV  +   Y
Sbjct: 161 SCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVY 220

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGI-------------------------------- 157
           + +     R GR   +++   KM  EG+                                
Sbjct: 221 NTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280

Query: 158 -------EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
                   P   TYN+ML GF     LE A   FE ++     + + +YN  + G  R  
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHG 340

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           K  EAE +  +M +K I P++ SY  ++ G   +    DA  I   MK   V P+AVTY 
Sbjct: 341 KFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYG 400

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            LL G C  GK+   + +L+EM+     P   +  + LL      G ++ A ++L+ M  
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI-LLHSLWNMGRISEAEELLRKMNE 459

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKL-----------LDKLVEKEIILRPQSTLDME 379
                +     I+++  C +   D+AI++           L  L    I L   S ++  
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519

Query: 380 A----SSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPDSAF 434
                 +Y+ ++  LC  G+  +A+  F ++M +K   D +A+N  I    K+G   SAF
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAF 579

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            ++K M ++G  +  + Y  LI     K +  +    +D M E G SP    + + ++ L
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYL 639

Query: 495 FEDGRVQTASRVMKSMVEKGVKENL----------------DLVAKILE-ALLMRGHVEE 537
            E G+V+ A+ ++  M++K +  N+                D+  ++ E A+ + G  E 
Sbjct: 640 CEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKE- 698

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
             G   LM        F+ LL+     G+ + A +LL+  L R   +    Y+ ++ +L 
Sbjct: 699 --GLYSLM--------FNELLAA----GQLLKATELLEAVLDRGFELGTFLYKDLVVSLC 744

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
              +   A  IL K+++KG   D  +   +I GL + GN K+A+
Sbjct: 745 KKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEAN 788



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 117/493 (23%), Positives = 214/493 (43%), Gaps = 35/493 (7%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L R GK   A  +L  M  KG+      + +L++   K G++ ++  I  +MK+ GV   
Sbjct: 336 LVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPD 395

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y  L       G+   AK    +M+     P  +T N++L   +   ++  A     
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLR 455

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M  +G  LD VT N +++G     ++D+A ++   M+              + G  A+ 
Sbjct: 456 KMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR--------------VHGSAALG 501

Query: 246 RADDAL--RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
              ++    + D +   +  P+ +TY+ LL GLC AG+  E + +  EM+   + P D+ 
Sbjct: 502 NLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQP-DSL 560

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +   +   CK G +++A  VLK M +         Y  LI              L+D++
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIR 422
            EK I   P         +YN  IQ+LC  G+   A     ++M+K +   V +F  LI 
Sbjct: 621 REKGI--SPN------ICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIG 672

Query: 423 GHSKEGNPDSAFEI----VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
              K  + D A E+    V I G++        Y  +    L  G+   A   L+++++ 
Sbjct: 673 AFCKVPDFDMAQEVFETAVSICGQK-----EGLYSLMFNELLAAGQLLKATELLEAVLDR 727

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G    + L++ ++ SL +   ++ AS ++  M++KG   +   +  +++ L   G+ +EA
Sbjct: 728 GFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEA 787

Query: 539 LGRIDLMMQSGSV 551
               + MM+  SV
Sbjct: 788 NNFAEKMMEMASV 800



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/378 (22%), Positives = 164/378 (43%), Gaps = 33/378 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L  +G+++ A  +L  M +KG   D     ++++     G + ++++I   M+  G
Sbjct: 437 LLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496

Query: 122 -------------------VERS----VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
                              +E +    + +Y  L   + + GR+  AK  F +M+ E ++
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQ 556

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P    YN+ +  F    K+ +A R  +DM+ +G    + TYN++I G     ++ E   L
Sbjct: 557 PDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM+EK I P + +Y T I+      + +DA  + DEM   ++ PN  ++  L+   C 
Sbjct: 617 MDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCK 676

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
                  Q+V    V   I  +   ++  +      +G L  A ++L+A++         
Sbjct: 677 VPDFDMAQEVFETAVS--ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  L+ + CK +  + A  +L K+++K     P + +        P+I  L   G   +
Sbjct: 735 LYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALM--------PVIDGLGKMGNKKE 786

Query: 399 AEIFFRQLMKKGVLDPVA 416
           A  F  ++M+   +  VA
Sbjct: 787 ANNFAEKMMEMASVGEVA 804


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 225/502 (44%), Gaps = 41/502 (8%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L R G++  A  ++  M ++G Q D   +  ++    K G    ++ +   M
Sbjct: 12  TFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKM 71

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            +  ++ +V  Y A+   + + G ++ A+  F +M  +GI P   TYN M+ G+    K 
Sbjct: 72  DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKW 131

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A +   DM  R I  DVVT++ +IN + +  K+  AE+L+ EM  +NI PT I+Y++M
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA-----------GKMVEVQ 286
           I G+    R +DA  +FD M S    P+ +T   L+ G C A           G +   Q
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQ 251

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            + +EM+   + P D      LL   C++G L  A ++ K   +  +  +     I+I  
Sbjct: 252 DLFQEMISNGVSP-DIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIING 310

Query: 347 FCKAEMYDRAIKLLDKL----VEKEII---------------LRPQST-LDM-------E 379
            CK    D A  L + L    VE +++               LR +   L+M        
Sbjct: 311 MCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPS 370

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +YN M+   C   +  +A      ++ +G   D V F+ LI+G+ K G  D   E+  
Sbjct: 371 TVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFS 430

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M +RG+  D   Y  LI  + + G+   A+   + M+  G  P +  FRS++  L    
Sbjct: 431 EMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKA 490

Query: 499 RVQTASRVMKSMVEKGVKENLD 520
            +Q    +++ + +K V   L+
Sbjct: 491 ELQKGLTMLEDL-QKSVDHELE 511



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/508 (22%), Positives = 220/508 (43%), Gaps = 57/508 (11%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M + G   +V ++  L   + R GR + A    ++M+ EG +P   TY  ++ G      
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
             +A+     M    I  +VV Y+ +++   +     +A+ +F EM EK I P V++Y  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI GY +  +  DA ++  +M   ++ P+ VT++AL+      GK+   +++ REM+ R 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 297 IPPKDNSV------FMK---------------------------------------LLGV 311
           I P   +       F K                                       L+  
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            C+ G++N A D+ + MI   +  +      L+   C+    ++A+++  K+ +K     
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMF-KVFQK----- 294

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNP 430
             S +D++ ++ N +I  +C   +  +A   F  L   GV  D V +N LI    KEGN 
Sbjct: 295 --SKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNF 352

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
             A +I   M  +G+      Y  +++ + ++    +A+  +DSM+ +G SP    F ++
Sbjct: 353 LRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTL 412

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           ++   + GRV     +   M ++G+  +      ++      G +  A    + M+ SG 
Sbjct: 413 IKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGV 472

Query: 551 VPN---FDSLLSVLSEKGKTIAAVKLLD 575
            P+   F S+L+ L  K +    + +L+
Sbjct: 473 CPDTITFRSMLAGLCTKAELQKGLTMLE 500


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 229/484 (47%), Gaps = 20/484 (4%)

Query: 43  FRWVERA-GLFNH--DRE---THLKMIEILGRVGKLNHARCILLDMPKK----GVQWDED 92
           FR ++ A   FNH   RE     ++  ++L  + K+      ++ + K+    G+  D  
Sbjct: 72  FRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIY 131

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
              +LI+ +     V  +  +F  M +LG++    +++ L   + + G++  A  +F+  
Sbjct: 132 TLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF 191

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            + G +PT +TY  ++ G     +   A   F+ M+  G   +VVTYN +I+   + K +
Sbjct: 192 EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLV 251

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +EA  +F+ MK K I P + +Y ++I+G     R  +A  + +EM S ++ PN  T+  L
Sbjct: 252 NEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVL 311

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  +C  GK+ E Q V + M E  + P D   +  L+        +  A  +  AMI   
Sbjct: 312 VDAICKEGKVSEAQGVFKTMTEMGVEP-DVVTYSSLMYGYSLRMEIVEARKLFDAMITKG 370

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              +A  Y ILI+ +CKA+  D A +L ++++ +   L P +       +YN +I  LC 
Sbjct: 371 CKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG--LTPDNV------NYNTLIHGLCQ 422

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+  +A+  F+ +   G L D   ++ L+ G  KEG    AF + ++M    +  D   
Sbjct: 423 LGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAM 482

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI++  + G   DA+     +   G  P   ++ +++ +L ++G +  A    ++M 
Sbjct: 483 YNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNME 542

Query: 512 EKGV 515
             G 
Sbjct: 543 GDGC 546



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 211/472 (44%), Gaps = 46/472 (9%)

Query: 44  RWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGK 103
           + +E AGL + D  T   +I+    + +++ A  +   M K G+Q D   F  LI    K
Sbjct: 119 KQMELAGL-SPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCK 177

Query: 104 KGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT 163
            G   ++V+ FD  +  G + +V +Y  +   + + G    A   F KM   G +P   T
Sbjct: 178 VGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVT 237

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK------------- 210
           YN+++        +  A+  F  MK++ IS D+ TYN++I G   F+             
Sbjct: 238 YNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMT 297

Query: 211 ----------------------KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
                                 K+ EA+ +F  M E  +EP V++Y++++ GY       
Sbjct: 298 SLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIV 357

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +A ++FD M +   KP+A +Y  L+ G C A ++ E +++  EM+ + + P DN  +  L
Sbjct: 358 EARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTP-DNVNYNTL 416

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   C+ G L  A D+ K M       +   Y +L++ FCK     +A +L    V +  
Sbjct: 417 IHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFR--VMQST 474

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKE 427
            L+P      + + YN +I  +C  G    A   F +L  +G+L  V  +  +I    KE
Sbjct: 475 YLKP------DIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKE 528

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           G  D A E  + M   G P D  +Y  +I  +L+  + + A   +  M + G
Sbjct: 529 GLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 199/427 (46%), Gaps = 11/427 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + N L        A++FF   E +G       T+  +I  L ++G+   A  +   M 
Sbjct: 169 NTLINGLCKVGKFAQAVEFFDDFEASGC-QPTVYTYTTIINGLCKIGETTAAAGLFKKME 227

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           + G Q +   + +LI+S  K  +V E++ IF  MK   +   + +Y++L + +    R+ 
Sbjct: 228 EAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWK 287

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A    N+M S  I P   T+NV++       K+  A   F+ M   G+  DVVTY++++
Sbjct: 288 EASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM 347

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            GY+   ++ EA KLF  M  K  +P   SY  +IKGY   +R D+A ++F+EM    + 
Sbjct: 348 YGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLT 407

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ V Y  L+ GLC  G++ E Q + + M      P D   +  LL   CK G+L  A  
Sbjct: 408 PDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLP-DLFTYSMLLDGFCKEGYLGKAFR 466

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + + M    +  +   Y ILI+  CK      A KL  +L  + ++   Q         Y
Sbjct: 467 LFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQ--------IY 518

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             +I +LC  G   +A   FR +   G   D  ++N +IRG  +  +   A +++  M  
Sbjct: 519 TTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRD 578

Query: 443 RGVPRDA 449
           RG   +A
Sbjct: 579 RGFVAEA 585



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/474 (21%), Positives = 200/474 (42%), Gaps = 48/474 (10%)

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           I   + M+  G+S D+ T + +I+ ++  +++D A  +F++M +  ++P  +++ T+I G
Sbjct: 115 ISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLING 174

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              V +   A+  FD+ ++   +P   TYT ++ GLC                       
Sbjct: 175 LCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC----------------------- 211

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
                        K G   AAA + K M           Y ILI++ CK ++ + A+ + 
Sbjct: 212 -------------KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIF 258

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNN 419
             +  K I          +  +YN +IQ LC+  +  +A     ++    ++  +  FN 
Sbjct: 259 SYMKAKRI--------SPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNV 310

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+    KEG    A  + K M   GV  D   Y  L+  Y  + E  +A+   D+MI  G
Sbjct: 311 LVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKG 370

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P +  +  +++   +  R+  A ++   M+ +G+  +      ++  L   G + EA 
Sbjct: 371 CKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQ 430

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
                M  +G++P+   +  LL    ++G    A +L           D+A Y  ++DA+
Sbjct: 431 DLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAM 490

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
              G   +A  +  ++  +G + + +    +I  L +EG   +A    R + G+
Sbjct: 491 CKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGD 544



 Score = 45.4 bits (106), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 39/207 (18%), Positives = 84/207 (40%), Gaps = 36/207 (17%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N++      AK  + A Q F  +   GL   D   +  +I  L ++G+L  A+ +  
Sbjct: 376 FSYNILIKGYCKAKRIDEAKQLFNEMIHQGL-TPDNVNYNTLIHGLCQLGRLREAQDLFK 434

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G   D   + +L++ + K+G + ++ ++F +M+   ++  +  Y+ L   + + G
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG 494

Query: 141 RYMMAKRYFNKMLSEGI-----------------------------------EPTRHTYN 165
               A++ F+++  +G+                                    P   +YN
Sbjct: 495 NLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYN 554

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGI 192
           V++ GF        A +   +M+ RG 
Sbjct: 555 VIIRGFLQYKDESRAAQLIGEMRDRGF 581


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 144/556 (25%), Positives = 257/556 (46%), Gaps = 37/556 (6%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
             L  AR     M   GV  +   + +LI +   +G  +E++ I   M+  G   +V +Y
Sbjct: 129 ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTY 188

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     R G    A+R    ML  G++P   T+N M+ G   + K+E A + F++M  
Sbjct: 189 NTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMR 248

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G++ D V+YNT++ GY +     EA  +FAEM +K I P V+++T++I         + 
Sbjct: 249 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEW 308

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A+ +  +M+   ++ N VT+TAL+ G C  G + +    +R M +  I P     +  L+
Sbjct: 309 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPS-VVCYNALI 367

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G ++ A ++L  M    +  +   Y  +I  +CK      A +L  +++EK ++
Sbjct: 368 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL 427

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
                    +A +Y+ +I+ LC   +   A + F+ ++K G+  D   + +LI GH KEG
Sbjct: 428 --------PDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 479

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           N + A  +   M + GV  D   Y  LI    +     +A+  L  +  +   PA++ + 
Sbjct: 480 NVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYD 539

Query: 489 SVMESLFE---------------DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           ++M    +                G +  A +V +SM+++    +  + + ++      G
Sbjct: 540 ALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAG 599

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSV---LSEKGKTIAA----VKLLDFCLGRD----- 581
           +V +AL     M+Q G  PN  S +S+   L E G  + A     +LL+ C   D     
Sbjct: 600 NVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASK 659

Query: 582 CIIDLASYEKVLDALL 597
            +IDL   E  +DA+L
Sbjct: 660 ALIDLNLNEGNVDAVL 675



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 246/535 (45%), Gaps = 35/535 (6%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           + FD M   GV  +V +Y+ L + +  RG    A      M   G  P   TYN ++  F
Sbjct: 136 RFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAF 195

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           F + +++ A R    M   G+  ++VT+N+M+NG  +  KM++A K+F EM  + + P  
Sbjct: 196 FRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDG 255

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           +SY T++ GY     + +AL +F EM    + P+ VT+T+L+  +C AG +     ++R+
Sbjct: 256 VSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQ 315

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M ER +   +   F  L+   CK G L+ A   ++ M +  I      Y  LI  +C   
Sbjct: 316 MRERGL-QMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVG 374

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             D A +LL ++  K   L+P      +  +Y+ +I   C N  T  A    +Q+++KGV
Sbjct: 375 RMDEARELLHEMEAKG--LKP------DVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 426

Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
           L D + +++LIR   +E     A  + K M + G+  D   Y  LI+ + ++G    A +
Sbjct: 427 LPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALS 486

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM-KSMVEKGVKENLDLVAKILEAL 529
             D M++ G  P    +  ++  L +  R   A +++ K   E+ +  N           
Sbjct: 487 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANT---------- 536

Query: 530 LMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL---SEKGKTIAAVKLLDFCLGRDCIIDL 586
                      + D +M         S+L++L     KG    A K+    L R+  +D 
Sbjct: 537 -----------KYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDG 585

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           + Y  ++     AG  + A S   +++++G   +  S+  LI GL + G   +AD
Sbjct: 586 SVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEAD 640



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 231/493 (46%), Gaps = 28/493 (5%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            M+  + + GK+  AR +  +M ++G+  D   +  L+  Y K G   E++ +F  M Q 
Sbjct: 225 SMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK 284

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+   V ++ +L  ++ + G    A     +M   G++    T+  ++ GF     L+ A
Sbjct: 285 GIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 344

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +     M+   I   VV YN +INGY    +MDEA +L  EM+ K ++P V++Y+T+I  
Sbjct: 345 LLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 404

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y        A  +  +M    V P+A+TY++L+  LC+  ++ +   + + M++  + P 
Sbjct: 405 YCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQP- 463

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+   CK G++  A  +   M++  +  +   Y +LI    K+     A +LL
Sbjct: 464 DEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
            KL  +E I  P +T       Y+ ++ H C      KAE+       K VL       L
Sbjct: 524 FKLYHEEPI--PANT------KYDALM-HCCR-----KAEL-------KSVLA------L 556

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           ++G   +G  + A ++ + M  R    D   Y  LI  + R G    A +    M++ G 
Sbjct: 557 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGF 616

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           +P S+   S++  LFE+G V  A +V++ ++      + +    +++  L  G+V+  L 
Sbjct: 617 APNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLD 676

Query: 541 RIDLMMQSGSVPN 553
            +  M + G +P+
Sbjct: 677 VLHGMAKDGLLPS 689



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 207/439 (47%), Gaps = 30/439 (6%)

Query: 27  YNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           YN L G    A  S  AL  F  + + G+   D  T   +I ++ + G L  A  ++  M
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMP-DVVTFTSLIHVMCKAGNLEWAVTLVRQM 316

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++G+Q +E  F  LI+ + KKG + +++     M+Q  ++ SV  Y+AL       GR 
Sbjct: 317 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRM 376

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+   ++M ++G++P   TY+ ++  +  +    +A    + M  +G+  D +TY+++
Sbjct: 377 DEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSL 436

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I      K++ +A  LF  M +  ++P   +YT++I G+      + AL + D+M    V
Sbjct: 437 IRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGV 496

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMV-ERYIPPKD--------------NSVFMK 307
            P+ VTY+ L+ GL  + + +E Q++L ++  E  IP                  SV   
Sbjct: 497 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLAL 556

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L G  C  G +N A  V ++M+  +   +   Y +LI   C+A    +A+    +++++ 
Sbjct: 557 LKGF-CMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
                 ST+         +I+ L  NG   +A+   +QL+    L D  A   LI  +  
Sbjct: 616 FAPNSTSTIS--------LIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLN 667

Query: 427 EGNPDSAFEIVKIMGRRGV 445
           EGN D+  +++  M + G+
Sbjct: 668 EGNVDAVLDVLHGMAKDGL 686



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 6/192 (3%)

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+   DSM+ DG +P    +  ++ +L   G  + A  +++ M   G   N+     ++ 
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 193

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           A    G V+ A   + +M+  G  PN   F+S+++ + + GK   A K+ D  +      
Sbjct: 194 AFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAP 253

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
           D  SY  ++     AG +  A S+  ++ +KG + D  +   LI  + + GN + A  L 
Sbjct: 254 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLV 313

Query: 645 RMIRGEMSRGSQ 656
           R +R    RG Q
Sbjct: 314 RQMR---ERGLQ 322



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 5/197 (2%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN ++  L  +     A  FF  ++  GV   V  +N LIR     G+   A  I++ M
Sbjct: 118 AYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDM 176

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G   +   Y  L+ ++ R GE   A+  +  M++ G  P    F S++  + + G++
Sbjct: 177 RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKM 236

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
           + A +V   M+ +G+  +      ++      G   EAL     M Q G +P+   F SL
Sbjct: 237 EDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 296

Query: 558 LSVLSEKGKTIAAVKLL 574
           + V+ + G    AV L+
Sbjct: 297 IHVMCKAGNLEWAVTLV 313


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 242/477 (50%), Gaps = 11/477 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A + FR     G+  +    ++ ++ +L ++GK+  A  +L+ M  +G   D   + V++
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNI-ILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIV 294

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + Y +   + + +K+ + +++ G++ +  +Y+++   + + GR + A++    M ++ I 
Sbjct: 295 DGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P    Y  ++ GF  S  +    + F++MK + I  D VTY +MI+G  +  K+ EA KL
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKL 414

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F+EM  K ++P  ++YT +I GY       +A  + ++M    + PN VTYTAL+ GLC 
Sbjct: 415 FSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCK 474

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G++    ++L EM E+ + P +   +  L+   CK G++  A  +++ M       +  
Sbjct: 475 CGEVDIANELLHEMSEKGLQP-NVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTI 533

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  +++ +CK     +A +LL  +++K +    Q T+     ++N ++   C +G    
Sbjct: 534 TYTTIMDAYCKMGEMAKAHELLRIMLDKGL----QPTI----VTFNVLMNGFCMSGMLED 585

Query: 399 AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
            E   + ++ KG++ +   FN+L++ +    N  +  EI K M  +GV  D + Y  LI+
Sbjct: 586 GERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIK 645

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
            + +     +A      M+E G S  ++ + S+++  ++  + + A ++ + M   G
Sbjct: 646 GHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 137/560 (24%), Positives = 253/560 (45%), Gaps = 51/560 (9%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            F+VL+E+    G++ E+ K+FD +   GV  SV S +    L L R             
Sbjct: 187 FFQVLVEA----GLLLEAGKLFDKLLNYGVLVSVDSCN----LFLAR------------- 225

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS   +  R                 TA R F +    G+  + V+YN +++   +  K+
Sbjct: 226 LSNSFDGIR-----------------TAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKV 268

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            EA  L  +M+ +   P V+SY+ ++ GY  VE+    L++ +E++   +KPN  TY ++
Sbjct: 269 KEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSI 328

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  G++VE ++VLR M  + I P DN V+  L+    KSG+++    +   M R  
Sbjct: 329 ISFLCKTGRVVEAEQVLRVMKNQRIFP-DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKK 387

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I  +   Y  +I   C+A     A KL  +++ K   L+P         +Y  +I   C 
Sbjct: 388 IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG--LKPDEV------TYTALIDGYCK 439

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+  +A     Q+++KG+  + V +  L+ G  K G  D A E++  M  +G+  +   
Sbjct: 440 AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCT 499

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI    + G    A   ++ M   G  P +  + ++M++  + G +  A  +++ M+
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           +KG++  +     ++    M G +E+    I  M+  G +PN   F+SL+     +    
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMR 619

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
           A +++      +  + D  +Y  ++     A     A+ +  +++EKG      S + LI
Sbjct: 620 ATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLI 679

Query: 629 AGLNQEGNTKQADILSRMIR 648
            G  +    ++A  L   +R
Sbjct: 680 KGFYKRKKFEEARKLFEEMR 699



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 229/477 (48%), Gaps = 48/477 (10%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
            L+    ++R GL   ++ T+  +I  L + G++  A  +L  M  + +  D  ++  LI
Sbjct: 306 VLKLMEELQRKGL-KPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLI 364

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             +GK G V    K+FD MK+  +     +Y ++   + + G+ + A++ F++MLS+G++
Sbjct: 365 SGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLK 424

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TY  ++ G+  + +++ A      M  +G++ +VVTY  +++G  +  ++D A +L
Sbjct: 425 PDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANEL 484

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM EK ++P V +Y  +I G   V   + A+++ +EM      P+ +TYT ++   C 
Sbjct: 485 LHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCK 544

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G+M +  ++LR M+++ + P                                +I T   
Sbjct: 545 MGEMAKAHELLRIMLDKGLQP--------------------------------TIVT--- 569

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC-HNGQTG 397
            + +L+  FC + M +   +L+  +++K I+  P +T      ++N +++  C  N    
Sbjct: 570 -FNVLMNGFCMSGMLEDGERLIKWMLDKGIM--PNAT------TFNSLMKQYCIRNNMRA 620

Query: 398 KAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
             EI ++ +  +GV+ D   +N LI+GH K  N   A+ + K M  +G    A +Y  LI
Sbjct: 621 TIEI-YKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLI 679

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           + + ++ +  +A+   + M   G      ++   ++  +E+G  +    +    +EK
Sbjct: 680 KGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEK 736



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 5/263 (1%)

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI--RGHSKEGNPDSAFEIVKIM 440
           ++   Q L   G   +A   F +L+  GVL  V   NL   R  +      +AF + +  
Sbjct: 184 FDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREY 243

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              GV  +  +Y  ++    + G+  +A + L  M   G+ P    +  +++   +  ++
Sbjct: 244 SEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQL 303

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
               ++M+ +  KG+K N      I+  L   G V EA   + +M      P+   + +L
Sbjct: 304 GKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTL 363

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +S   + G      KL D    +  + D  +Y  ++  L  AGK + A  +  +++ KG 
Sbjct: 364 ISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGL 423

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA 640
             D  +   LI G  + G  K+A
Sbjct: 424 KPDEVTYTALIDGYCKAGEMKEA 446


>gi|297832366|ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329905|gb|EFH60324.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1056

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/625 (22%), Positives = 281/625 (44%), Gaps = 63/625 (10%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           +  R W  +L++     VP  DH  +  ++   K++  AL+ FRW      F H R T+ 
Sbjct: 11  LTRRLWLPQLRSSSLLSVPSDDH--IVRLILDQKSASGALETFRWASTFPGFIHSRSTYR 68

Query: 61  KMIEILGRVGKLNHARCILLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
            +   L    + +    +L +MP+  G+  D+ +F  +I  +G+  + +  + + D++ +
Sbjct: 69  ALFYKLCVFRRFDTVYQLLDEMPESTGLPPDDAIFVTIIRGFGRARLTKRVISVVDLVSK 128

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G++ S+K ++++  ++++    +  + +  KM++ GI+   +TY +++ G  L+ ++  
Sbjct: 129 FGIKPSLKVFNSILDVLVKEDIDIAREFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGD 188

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
             +  + MK+ G++ + V YNT+++   +  K+  A  L +EMK    EP  +++  +I 
Sbjct: 189 GFKLLQIMKTCGVAPNTVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILIS 244

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
            Y   ++   ++ + ++  S  + P+ VT T ++  LC+ G++ E  +VL E VE     
Sbjct: 245 AYCNEQKLIQSMVLLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALEVL-ERVESKGGK 303

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D      L+   C  G +  A    + M R         Y +LI  FC   M D A+  
Sbjct: 304 VDVVACNTLVKGYCAVGKMRVAQRFFQEMERKGYLPNVETYNLLIAGFCDVGMLDSALDT 363

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK------GVLD 413
            + +            +    +++N +I+ L   G+T    I   +LM+         +D
Sbjct: 364 FNDM--------KTDAIRWNFATFNTLIRGLSVRGRTDDG-IKILELMQDSETVHGARID 414

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIV----------------------------------KI 439
           P  +N++I G  KE   + A E +                                  ++
Sbjct: 415 P--YNSVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDVKTAYDQM 472

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
            G  GVP    ++ CLI  Y ++G   +    ++ M+  G+ P SS F +V+    ++ +
Sbjct: 473 TGEGGVPSVIVSH-CLIHRYSQEGYMEETLELINDMVTRGYLPRSSTFNAVIIGFCKEDK 531

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           V    + ++ M E+G   + +    +LE L ++G +++A   + LM++   VP+   + S
Sbjct: 532 VMNGIKFVEDMAERGCVPDRESYNPLLEELCVKGDIQKAWLLLSLMVEKSIVPDSSMWSS 591

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRD 581
           L+  LS+K        L D    RD
Sbjct: 592 LMFCLSQKTAIHLNTSLQDIIENRD 616



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 95/231 (41%), Gaps = 7/231 (3%)

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D   F  +IRG  +         +V ++ + G+      +  +++  +++      +   
Sbjct: 99  DDAIFVTIIRGFGRARLTKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFR 158

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M+  G       +  +M+ L    R+    ++++ M   GV  N  +   +L AL   
Sbjct: 159 RKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMKTCGVAPNTVVYNTLLHALCKN 218

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G V    GR   +M     PN   F+ L+S    + K I ++ LL+ C     + D+ + 
Sbjct: 219 GKV----GRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGLVPDVVTV 274

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            KV++ L   G+   A  +L ++  KGG  D  + + L+ G    G  + A
Sbjct: 275 TKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVA 325


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 168/698 (24%), Positives = 299/698 (42%), Gaps = 68/698 (9%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLF---NHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +YNVL  +   E+ ++   W+ +  +    + +  T   +I +L   G L  AR +   M
Sbjct: 114 LYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKM 173

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           P +G + +E  F +L+  Y + G+  + +++   M+ +G+  +   Y+ L     + G+ 
Sbjct: 174 PARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKT 233

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK-SRGISL---DVVT 198
             A++  +KM  +G+ P   T+N  +     S K+  A R F DM+    + L   +V+T
Sbjct: 234 HDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVIT 293

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEK--------------------------------- 225
           Y  M+ G+ +   ++EA+ L   MK                                   
Sbjct: 294 YKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEML 353

Query: 226 --NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
              IEP + SY  ++ G        DA  +   M    + P+ VTY+ LL G C  GK+ 
Sbjct: 354 GIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVF 413

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E   +L EM+     P   +  + LL    K G ++ A ++L+ M       +     I+
Sbjct: 414 EANNLLHEMISNNCSPNTYTCNV-LLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNII 472

Query: 344 IENFCKAEMYDRAIKLLDKL-----------------VEKEIILRPQSTLDMEASSYNPM 386
           I   C     D+AI++++ +                 +  + I   + T D+   +Y+ +
Sbjct: 473 INALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDL--VTYSTI 530

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC  G+   A+  F ++M KG+  D   ++  I    +EG   SAF+++K M +RG 
Sbjct: 531 ISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGC 590

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
            +    Y  LI     K +  +    +D M E G SP    +  ++  L E GR+  A  
Sbjct: 591 NKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPS 650

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEA--LGRIDLMMQSGSVPNFDSLLSVLSE 563
           V+  M++KG+  N+     +++A       + +  +  I L +       +  + + L  
Sbjct: 651 VLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLV 710

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            GK   A +L +  L R   I    Y+ ++D L    K   A  +L ++++KG   D  S
Sbjct: 711 GGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPAS 770

Query: 624 SDKLIAGLNQEGNTKQADILS-RMIRGEMSRGSQKEKK 660
              +I G  + GN   AD L+ RM+  EM+  S KE K
Sbjct: 771 FMPVIDGFGKMGNKHVADELAERMM--EMASESNKENK 806



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/556 (23%), Positives = 236/556 (42%), Gaps = 70/556 (12%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVER--SVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
           L+    K G   +++  F  ++    E+  S+  Y+ L K  +R  R  +    +  M+ 
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
             + P  +T+N+++     S  LE A   F+ M +RG   +  T+  ++ GY R     +
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASK 200

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
             +L  +M+   I P  + Y T+I  +    +  DA ++ D+M+   + P+  T+ + + 
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRIS 260

Query: 275 GLCDAGKMVEVQKVLREMV--ERYIPPKDNSVFMKLLGVQ-CKSGHLNAAADVLKAMIRL 331
            LC +GK++E  ++ R+M   E    P  N +  KL+ +  CK G L  A  ++  M R 
Sbjct: 261 ALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRN 320

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLL-----DKLVEKEIILRPQSTLDMEAS--SYN 384
           +             NF   E Y+  I LL      KL+E  I+L+    + +E    SYN
Sbjct: 321 A-------------NFINLESYN--IWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYN 365

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
            ++  LC NG    A +    +++ G+L                 PD+            
Sbjct: 366 IVMDGLCKNGMLSDARMLMGLMIRNGIL-----------------PDTV----------- 397

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
                  Y  L+  Y  KG+  +A   L  MI +  SP +     ++ SL+++GR+  A 
Sbjct: 398 ------TYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAE 451

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEK 564
            +++ M EKG   +      I+ AL   G +++A+  ++ M   GS        + L   
Sbjct: 452 NLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGS--------AALGNL 503

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G +   + + D   G+ C  DL +Y  ++  L  AG+  +A     ++M KG   D    
Sbjct: 504 GNSFIGL-VDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIY 562

Query: 625 DKLIAGLNQEGNTKQA 640
           D  I    +EG    A
Sbjct: 563 DTFIHSFCREGKISSA 578


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/569 (24%), Positives = 262/569 (46%), Gaps = 16/569 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG---VERSVKSYDALFKLILR 138
           MP+ G   D   +  LI+    +   QE++++   M   G      +V SY+ +     +
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G    A   F++M+ +G+ P   TYN ++ G   +  ++ A+   + M  +G+  D  T
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRT 272

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN MI GY    +++EA +L  +M    ++P V++Y+ +I+ Y  + R  +A  +FD M 
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
               KPN+  Y  LL G    G +++V+ +L  M+   I P ++  F  L+    K G +
Sbjct: 333 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI-PFEHRAFNILICAYAKHGAV 391

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A      M +  +  +   Y  +I   CK    + A+   +++V +   L P      
Sbjct: 392 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG--LSPNII--- 446

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
              S+  +I  LC  G+  K E    +++ +G+  D +  N ++    KEG    A +  
Sbjct: 447 ---SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF 503

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
            ++   GV  D  +Y  LI+ Y   G+  ++   LD M+  G  P S  + S++   F++
Sbjct: 504 DMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKN 563

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNF 554
           GRV+ A  + + M  K VK        +L  L   G +  A      M+  G+   +  +
Sbjct: 564 GRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETY 623

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
           +++L  L E      A+++ +    ++  +D+ ++  V++ALL  G+   A S+   ++ 
Sbjct: 624 NTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVL 683

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           +G V D  +   +I    +EG  +++D L
Sbjct: 684 RGPVPDVITYSLMIKSHIEEGLLEESDNL 712



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 124/553 (22%), Positives = 248/553 (44%), Gaps = 24/553 (4%)

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILR-------RGRYMMAKRYFNKMLSEGIEPT 160
           ++++ +FD +       SV +++++  ++ R       R    +A   FN M+  G+   
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA-EKLF 219
                +++  F    +L+ A   F      G  +  VT N +I G     + D+A + +F
Sbjct: 91  AAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVF 150

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS---FDVKPNAVTYTALLPGL 276
             M E    P V SY  +IKG    +++ +AL +   M +   ++  PN V+Y  ++ G 
Sbjct: 151 RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGF 210

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
              G++ +   +  EM+ + +PP D   +  L+   CK+  ++ A  +L+ M    +  +
Sbjct: 211 FKEGEVDKAYFLFHEMMGQGLPP-DVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPD 269

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y I+I  +C     + A++LL K+          S L  +  +Y+ +IQ+ C  G+ 
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKM--------SGSGLQPDVVTYSLLIQYYCKIGRC 321

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A   F  +++KG   +   ++ L+ G++ +G      +++ +M R G+P +  A+  L
Sbjct: 322 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 381

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I +Y + G    A TA   M ++G  P    + +V+  L + GRV+ A      MV +G+
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             N+     ++  L   G  ++       M+  G  P+    ++++  L ++G+ + A  
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 501

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
             D  +      D+ SY  ++D     GK   +   L +++  G   D  + + L+ G  
Sbjct: 502 FFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYF 561

Query: 633 QEGNTKQADILSR 645
           + G  + A  L R
Sbjct: 562 KNGRVEDALALYR 574



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 135/562 (24%), Positives = 249/562 (44%), Gaps = 62/562 (11%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE--THLKMIEILGRVGKLNHARCI 78
           F +N +   L   K S+ AL+    +   G +N      ++  +I+   + G+++ A  +
Sbjct: 163 FSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFL 222

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
             +M  +G+  D   +  LI+   K   + ++V I   M   GV    ++Y+ + +    
Sbjct: 223 FHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCS 282

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR-------- 190
            G+   A R   KM   G++P   TY++++  +    +   A   F+ M  +        
Sbjct: 283 LGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI 342

Query: 191 ---------------------------GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
                                      GI  +   +N +I  Y +   +D+A   F EM+
Sbjct: 343 YHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMR 402

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           +  + P V+SY+T+I       R +DA+  F++M S  + PN +++T+L+ GLC  G+  
Sbjct: 403 QNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWK 462

Query: 284 EVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
           +V+++  EM+ R I P  +++FM  ++   CK G +  A D    +I + +  +   Y  
Sbjct: 463 KVEELAFEMINRGIHP--DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNT 520

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           LI+ +C     D +IK LD++V   I LRP S       +YN ++     NG+   A   
Sbjct: 521 LIDGYCFVGKMDESIKQLDRMV--SIGLRPDSW------TYNSLLNGYFKNGRVEDALAL 572

Query: 403 FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           +R++ +K V    +  N ++ G  + G   +A E+   M  RG     + Y  ++     
Sbjct: 573 YREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLC- 631

Query: 462 KGEPADAKTALDSMIEDGHSPASSL----FRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
             E +    AL  M ED  S    L    F  V+ +L + GR+  A  +  +MV +G   
Sbjct: 632 --ENSCVDEAL-RMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVP 688

Query: 518 NLDLVAKILEALLMRGHVEEAL 539
           ++     I  +L+++ H+EE L
Sbjct: 689 DV-----ITYSLMIKSHIEEGL 705



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 218/478 (45%), Gaps = 11/478 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A++  + +  +GL   D  T+  +I+   ++G+   AR +   M +KG + +  ++ +
Sbjct: 287 EEAVRLLKKMSGSGL-QPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 345

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+  Y  KG + +   + D+M + G+    ++++ L     + G    A   F +M   G
Sbjct: 346 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 405

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   +Y+ ++     + ++E A+  F  M S G+S +++++ ++I+G     +  + E
Sbjct: 406 LRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVE 465

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +L  EM  + I P  I   T++       R  +A   FD +    VKP+ V+Y  L+ G 
Sbjct: 466 ELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGY 525

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  GKM E  K L  MV   + P D+  +  LL    K+G +  A  + + M R  +   
Sbjct: 526 CFVGKMDESIKQLDRMVSIGLRP-DSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFC 584

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
           A    I++    +A     A +L  K+V++   LR +        +YN ++  LC N   
Sbjct: 585 AITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIE--------TYNTVLGGLCENSCV 636

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A   F  L  K   LD   F+ +I    K G  D A  +   M  RG   D   Y  +
Sbjct: 637 DEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLM 696

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           I+S++ +G   ++     SM ++G +  S +   ++  L E G V+ A   +  + EK
Sbjct: 697 IKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEK 754



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 123/549 (22%), Positives = 240/549 (43%), Gaps = 48/549 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L +   ++ A  IL  M  KGV  D   + ++I  Y   G ++E+V++ 
Sbjct: 234 DVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLL 293

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G++  V +Y  L +   + GR   A+  F+ M+ +G +P    Y+++L G+   
Sbjct: 294 KKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATK 353

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L       + M   GI  +   +N +I  Y +   +D+A   F EM++  + P V+SY
Sbjct: 354 GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSY 413

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC----------------- 277
           +T+I       R +DA+  F++M S  + PN +++T+L+ GLC                 
Sbjct: 414 STVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN 473

Query: 278 -----DA-------------GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
                DA             G++VE Q     ++   + P D   +  L+   C  G ++
Sbjct: 474 RGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP-DVVSYNTLIDGYCFVGKMD 532

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            +   L  M+ + +  ++  Y  L+  + K    + A+ L  ++  K++           
Sbjct: 533 ESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDV--------KFC 584

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
           A + N M+  L   G+   A   + +++ +G  L    +N ++ G  +    D A  + +
Sbjct: 585 AITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFE 644

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            +  +    D   +  +I + L+ G   +AK+   +M+  G  P    +  +++S  E+G
Sbjct: 645 DLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEG 704

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFD 555
            ++ +  +  SM + G   +  ++  I+  LL +G V  A   L +ID    S       
Sbjct: 705 LLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAA 764

Query: 556 SLLSVLSEK 564
            L+ ++SEK
Sbjct: 765 LLIPIVSEK 773


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 153/616 (24%), Positives = 270/616 (43%), Gaps = 39/616 (6%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   ++  L R  +L  AR +L  M + G   D+ ++  LI  Y K     ++ K  
Sbjct: 9   DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL 68

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M +     +V +Y  +   + + GR   A +  ++M  +G  P  +TYNV++ G    
Sbjct: 69  AEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEE 128

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL+ A +  E+M  RG   DVVTYN+ I G  +  ++DEA K  A M    + P V+SY
Sbjct: 129 RKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSY 185

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           TT+I G       D A R+ D+M +    P+ VTY++L+ G C  G++     +L  M++
Sbjct: 186 TTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 245

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P +   +  LLG   + GH+  A D+L  M R     +   Y   I+  CKAE   
Sbjct: 246 LGCRP-NMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 355 RAIKLLDKLVEKEIILRPQS------------------TLDMEASS---------YNPMI 387
           +A  + D++VE+       S                  TL  +A           Y  ++
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
             LC  G+  +A   F +++ + + +P  F  N ++  H K    D A +I K M  R  
Sbjct: 365 DGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC 424

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
                  I L+         +DA+T L +M+++G  P    + ++++++ + G+   A  
Sbjct: 425 CNVVTWNI-LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 483

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKG 565
           + +  V+ G   ++   + ++  L+     EEA     L+     V  +++++   +E G
Sbjct: 484 LFEEAVKGGCVPDVVTYSALITGLVHENMAEEAY----LLFTKLDVALWNAMILGYAENG 539

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG-VTDWKSS 624
                +KL    +  D   +  ++ K +   L   ++L     LF    KGG   D   +
Sbjct: 540 SGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVA 599

Query: 625 DKLIAGLNQEGNTKQA 640
           + LI    + G+ ++A
Sbjct: 600 NTLIDVFAKCGDLEEA 615



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 237/527 (44%), Gaps = 43/527 (8%)

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M+ +  +P   T+ ++L G   S +LE A +    MK  G   D   YN +I+GY++ K 
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
             +A K  AEM + +  PTV++YT ++ G     R  DA+++ DEM+     PN  TY  
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 272 LLPGLCDAGKMVEVQKVLREMVER-YIP------------------------------PK 300
           ++ GLC+  K+ E +K+L EM  R Y P                                
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  ++   CKSG L++A+ +L  M       +   Y  LI+ FCK    +RA+ LL
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           D +++  +  RP         +YN ++  L   G  GKAE    ++ ++G   D V++N 
Sbjct: 241 DSMLK--LGCRPNMV------AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            I G  K      A  +   M  RG   +A +Y  L+E   +K E  DA T ++   E  
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKY 352

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVM-KSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
                 L+  +++ L + GR   A  +  K + EK  + ++     +L++   R  +++A
Sbjct: 353 QIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 412

Query: 539 LGRIDLMMQ--SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
           L     M++    +V  ++ L+  L    +   A  +L   +    I D  +Y  ++DA+
Sbjct: 413 LQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAM 472

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
              GK+  A  +  + ++ G V D  +   LI GL  E   ++A +L
Sbjct: 473 CKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLL 519



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/560 (23%), Positives = 258/560 (46%), Gaps = 25/560 (4%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  K  Q D   F +L+    +   ++++ ++   MK++G       Y+AL     +   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A ++  +M+     PT  TY  ++ G   + + + A++  ++M+ +G S ++ TYN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++ G    +K+DEA+K+  EM  +   P V++Y + IKG    +R D+A +    M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V P+ V+YT ++ GLC +G +    ++L +M  R   P D   +  L+   CK G +  A
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTP-DVVTYSSLIDGFCKGGEVERA 236

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +L +M++L        Y  L+    +     +A    D LVE E   R   T D+   
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKA---EDMLVEME---RRGFTPDV--V 288

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           SYN  I  LC   +  KA+  F +++++G   +  +++ L+    K+   D A  +V+  
Sbjct: 289 SYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQA 348

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM-ESLFEDGR 499
             +    D   Y  L++   + G   +A      ++++        F +VM +S  +  +
Sbjct: 349 REKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 408

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DS 556
           +  A ++ K M+E+    N+     ++  L +   + +A   +  M+  G +P+F    +
Sbjct: 409 IDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 467

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L+  + + GK+ AA++L +  +   C+ D+ +Y  ++  L+       AY +  K+    
Sbjct: 468 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL---- 523

Query: 617 GVTDWKSSDKLIAGLNQEGN 636
            V  W +   +I G  + G+
Sbjct: 524 DVALWNA---MILGYAENGS 540



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 3/255 (1%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N +   LH   +   A      +ER G F  D  ++   I+ L +  ++  A+ +   M
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRG-FTPDVVSYNACIDGLCKAERVKKAKAVFDRM 313

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++G   +   + +L+E   KK  + +++ + +  ++      +  Y  L   + + GR+
Sbjct: 314 VERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRF 373

Query: 143 MMAKRYFNKMLSEGI-EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             A   F+K+L E I EP    YNVML       +++ A++  + M  R    +VVT+N 
Sbjct: 374 DEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNI 432

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G     ++ +AE +   M ++   P  ++Y T++       ++  AL +F+E     
Sbjct: 433 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 492

Query: 262 VKPNAVTYTALLPGL 276
             P+ VTY+AL+ GL
Sbjct: 493 CVPDVVTYSALITGL 507


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 153/671 (22%), Positives = 292/671 (43%), Gaps = 51/671 (7%)

Query: 13  KIRALVPQF---DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           K + LVP     + +  +  L    N + AL FF +V     F     ++  +I +L   
Sbjct: 74  KCKELVPHLSPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRFTARSYCVLIHLLVGN 133

Query: 70  GKLNHARCILLDM--------------------------------PKKGVQWDEDMFEVL 97
             L+ AR +L+ +                                P  GV+  + +  V 
Sbjct: 134 DLLSPARLLLIRLIDGKVPAFYARNFESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVY 193

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
              +   G    +  +F ++ + G+  S+K+   L   +++      +   ++ +   GI
Sbjct: 194 STQFKHLGF-GFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGI 252

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
            P  H ++ M+  F    + + AI  F  M+  G++ +VVTYN +I+G  +  ++DEA +
Sbjct: 253 IPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYR 312

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
              +M ++ + P++I+Y+  I G + +E+ D+A  +  EM      PN V Y  L+ G C
Sbjct: 313 FKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYC 372

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
             G + E  K+  +M+ + I P  NSV +  L+   CKS  +  A +VL+ MI   +P  
Sbjct: 373 KMGNISEALKIRDDMLSKGISP--NSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPIN 430

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
            G + ++I   C    +  A+  + +++ +   LRP   L         ++  LC  G+ 
Sbjct: 431 QGSFSMVINWLCLKFRFVTALHFIREMLLRN--LRPNDGL------LTTLVSGLCKAGKQ 482

Query: 397 GKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
           G+A E++ R L K  V + V  N LI G  K GN     ++++ M  RG+  D   Y  L
Sbjct: 483 GEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTL 542

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I    ++G+  +     + M++ G  P    F  ++  L    ++  ASR+     + G 
Sbjct: 543 ISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGY 602

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             N+     +++       VEE    ++ ++      N   ++SL+      G   AA +
Sbjct: 603 VPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFR 662

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           L D    R  ++  A+Y  ++  L   G   +A  +L ++ ++G + +      +I G +
Sbjct: 663 LRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYS 722

Query: 633 QEGNTKQADIL 643
           + G   + +I+
Sbjct: 723 KLGQMNKVNIV 733



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 147/613 (23%), Positives = 270/613 (44%), Gaps = 52/613 (8%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           + KKG+         L+ S  K   +++S +++D +   G+   V  +  +     +  R
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F+KM   G+ P   TYN ++ G   S +L+ A RF E M    +S  ++TY+ 
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSV 331

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            ING  + +K+DEA  +  EM E    P  + Y T+I GY  +    +AL+I D+M S  
Sbjct: 332 FINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + PN+VT  +L+ G C + ++ + + VL EM+ R +P    S F  ++   C       A
Sbjct: 392 ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGS-FSMVINWLCLKFRFVTA 450

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
              ++ M+  ++    G    L+   CKA     A++L  +L+ K  +    ++      
Sbjct: 451 LHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS------ 504

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
             N +I  LC  G   +     R ++++G V D + +N LI G  KEG     FE+ + M
Sbjct: 505 --NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEM 562

Query: 441 GRRGVPRD-------------AD----------------------AYICLIESYLRKGEP 465
            ++G+  D             AD                       Y  +I+ Y +  + 
Sbjct: 563 VKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKV 622

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            + +  L+ ++       S ++ S++ +   +G +  A R+   M  +GV  +    + +
Sbjct: 623 EEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSL 682

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           +  L   G V++A   +D M + G +PN   + +++   S+ G+      +L      + 
Sbjct: 683 MHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNI 742

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADI 642
             +  +Y  ++D     GKT  A  +L ++ EKG + D  + +    GL +EG  ++A  
Sbjct: 743 HPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEA-- 800

Query: 643 LSRMIRGEMSRGS 655
               +  EMS G+
Sbjct: 801 --FKVCDEMSSGA 811



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 136/574 (23%), Positives = 251/574 (43%), Gaps = 50/574 (8%)

Query: 28  NVLHGAKNSEHALQFFRWVER--AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           N++HG   S    + +R+ E+      +    T+   I  L ++ K++ A C+L +M + 
Sbjct: 296 NIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSEL 355

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G   +E ++  LI+ Y K G + E++KI D                              
Sbjct: 356 GFVPNEVVYNTLIDGYCKMGNISEALKIRD------------------------------ 385

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
                 MLS+GI P   T N ++ GF  S ++  A    E+M  RG+ ++  +++ +IN 
Sbjct: 386 -----DMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINW 440

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
                +   A     EM  +N+ P     TT++ G     +  +A+ ++  +      PN
Sbjct: 441 LCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPN 500

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            VT  AL+ GLC AG M E  K+LR+M+ER +   D   +  L+   CK G +    ++ 
Sbjct: 501 IVTSNALIHGLCKAGNMQETLKLLRDMLERGLV-FDRITYNTLISGCCKEGKVKEGFELK 559

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
           + M++  I  +   + +L+   C A+  D A +L  +  +   +  P         +Y  
Sbjct: 560 EEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYV--PN------VYTYGV 611

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           MI   C   +  + E    +L+ K + L+ V +N+LIR +   GN ++AF +   M  RG
Sbjct: 612 MIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V      Y  L+      G   DAK  LD M ++G  P    + +++    + G++   +
Sbjct: 672 VLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVN 731

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
            V++ M    +  N      +++     G  +EA   ++ M + G +P+   +++  + L
Sbjct: 732 IVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGL 791

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
            ++GK   A K+ D        +D  +Y  ++D 
Sbjct: 792 CKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 165/337 (48%), Gaps = 9/337 (2%)

Query: 15  RALVPQFDHNLVYN--VLHG---AKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGR 68
           R L   F  N+V +  ++HG   A N +  L+  R  +ER  +F  DR T+  +I    +
Sbjct: 491 RLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVF--DRITYNTLISGCCK 548

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
            GK+     +  +M KKG+Q D   F +L+        + E+ +++   K+ G   +V +
Sbjct: 549 EGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYT 608

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  +     +  +    +   N+++S+ +E     YN ++  + ++  +  A R  +DMK
Sbjct: 609 YGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMK 668

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           SRG+ L   TY+++++G      +D+A+ L  EM+++ + P V+ YTT+I GY  + + +
Sbjct: 669 SRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMN 728

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
               +  EM S ++ PN  TYT ++ G C  GK  E  K+L EM E+ I P D   +   
Sbjct: 729 KVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILP-DAVTYNAF 787

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
               CK G +  A  V   M   ++  +   Y  LI+
Sbjct: 788 TNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLID 824



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 1/255 (0%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           +  NL+ + L  A   + A + +   ++ G +  +  T+  MI+   +  K+     +L 
Sbjct: 572 YTFNLLLHGLCNADKIDEASRLWHECKKNG-YVPNVYTYGVMIDGYCKANKVEEGENLLN 630

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           ++  K ++ +  ++  LI +Y   G +  + ++ D MK  GV  S  +Y +L   +   G
Sbjct: 631 ELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIG 690

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               AK   ++M  EG+ P    Y  ++ G+    ++       ++M S  I  +  TY 
Sbjct: 691 LVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYT 750

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            MI+G+ +  K  EA KL  EM EK I P  ++Y     G     + ++A ++ DEM S 
Sbjct: 751 IMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSG 810

Query: 261 DVKPNAVTYTALLPG 275
            V  + +TYT L+ G
Sbjct: 811 AVCLDEITYTTLIDG 825


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 142/598 (23%), Positives = 268/598 (44%), Gaps = 22/598 (3%)

Query: 47  ERAGL---FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGK 103
           E+AGL   + H    +  +I+ LG VG+      +L  M  +G  + E +F +++  YGK
Sbjct: 82  EKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGK 141

Query: 104 KGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
            G+  ++ ++  D+      E + KSY+ + ++++      +A   F  MLS GI PT +
Sbjct: 142 AGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVY 201

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           T+ V++  F +  ++++A     DM   G   + + Y  +I+  +   +++EA KL  EM
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
                EP V ++  +I G     R  +A ++ D M   D   +A+    L+ GLC  GK+
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKV 321

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL-KAMIRLSIPTEAGHYG 341
            E + +L +     IP  +  ++  L+     SG    A D+L K M+      +A  + 
Sbjct: 322 DEARAMLSK-----IPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFN 376

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
           I+I+  CK      A++ LD++V+K          +    +Y  +I   C  G   +A  
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKK--------GFEPNVITYTILIDGFCKQGHFEEASK 428

Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
               +  KG+ L+ V +N LI    K+G    A ++   M  +G   D   +  LI    
Sbjct: 429 VVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLC 488

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           +  +  +A      M+ +G    +  + +++ +      +Q A +++  M  +G   +  
Sbjct: 489 KNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNI 548

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFC 577
               +++AL   G  E+ LG I+ M      P+ +S   L++     GK   A++ L   
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM 608

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
           + R    D+ +Y  +++ L   G+   A ++   +  KG   D  + + LI+    EG
Sbjct: 609 IQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEG 666



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 159/318 (50%), Gaps = 1/318 (0%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T   MI+ L + G L  A   L +M KKG + +   + +LI+ + K+G  +E+ 
Sbjct: 368 FEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K+ + M   G+  +   Y+ L   + + G+   A + + +M S+G +P  +T+N +++G 
Sbjct: 428 KVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGL 487

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + K+E A+  + DM   G+  + VTYNT+I+ + R + + +A+KL  EM+ +      
Sbjct: 488 CKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDN 547

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I+Y  +IK        +  L + ++M   ++ P+  +   L+   C  GK+ +  + LR+
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M++R + P D   +  L+   CK G    A ++   +    I  +A  Y  LI  +C   
Sbjct: 608 MIQRGLTP-DIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEG 666

Query: 352 MYDRAIKLLDKLVEKEII 369
           +++ A +LL K V    I
Sbjct: 667 LFNDACQLLFKGVSNGFI 684



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 206/460 (44%), Gaps = 22/460 (4%)

Query: 70  GKLNHARCILL-DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           G+   A+ +L  +M   G + D   F ++I+   KKG +  +++  D M + G E +V +
Sbjct: 350 GRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVIT 409

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  L     ++G +  A +  N M ++G+      YN ++       K++ A++ + +M 
Sbjct: 410 YTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMS 469

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           S+G   D+ T+N++I G  +  KM+EA  L+ +M  + +    ++Y T+I  ++ +E   
Sbjct: 470 SKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQ 529

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A ++  EM+      + +TY  L+  LC  G   +   ++ +M    I P  NS  + L
Sbjct: 530 QADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI-L 588

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   C++G +N A   L+ MI+  +  +   Y  LI   CK   +  A+ L + L  K I
Sbjct: 589 INSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI 648

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKE 427
              P      +A +YN +I   C+ G    A ++ F+ +    + + + ++ LI    K 
Sbjct: 649 --HP------DAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKN 700

Query: 428 GNPDSAFEIVKIMGRRG-----VPRDADAYICL-IESYLRKGEPADAKTALDSMIEDGHS 481
            +    F I  +MG  G     + R   +  C+ I  +   G P      L   +    +
Sbjct: 701 NSDSEQFTI--LMGNWGFWLAAIIRHVSSIGCIAIFMWQIFGFPPSIINNLHIAVSGNFA 758

Query: 482 PASSL---FRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             +SL   F   + +    GRV     ++ S +   +K N
Sbjct: 759 VDTSLLKDFVFAIHNFIGIGRVHEYLLLVISQIAATIKTN 798



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 122/251 (48%), Gaps = 5/251 (1%)

Query: 27  YNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           YN L GA       + ALQ +  +   G    D  T   +I  L +  K+  A  +  DM
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGC-KPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +GV  +   +  LI ++ +  ++Q++ K+   M+  G      +Y+ L K + + G  
Sbjct: 504 LLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGAT 563

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                   +M  E I P+ ++ N+++  F  + K+  A++F  DM  RG++ D+VTYN++
Sbjct: 564 EKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSL 623

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING  +  +  EA  LF  ++ K I P  ++Y T+I  Y      +DA ++  +  S   
Sbjct: 624 INGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGF 683

Query: 263 KPNAVTYTALL 273
            PN +T++ L+
Sbjct: 684 IPNEITWSILI 694



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 2/220 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           ++L+Y +    K  E AL  +R +   G+   +  T+  +I    R+  +  A  ++ +M
Sbjct: 481 NSLIYGLCKNDK-MEEALGLYRDMLLEGVI-ANTVTYNTLIHAFLRLELIQQADKLVGEM 538

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G   D   +  LI++  K G  ++ + + + M    +  S+ S + L     R G+ 
Sbjct: 539 RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKV 598

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A ++   M+  G+ P   TYN ++ G     + + A+  F  ++++GI  D VTYNT+
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTL 658

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
           I+ Y      ++A +L  +       P  I+++ +I  +V
Sbjct: 659 ISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFV 698



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 4/210 (1%)

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADA-KTALDSMIEDGHSPASSLFRSVMES 493
           +++K M   G       +I ++  Y + G P  A +  LD        P    +  V+E 
Sbjct: 115 KLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEI 174

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L      + A  V   M+ +G+   +     +++A  M   V+ A   +  M + G VPN
Sbjct: 175 LVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPN 234

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              +  L+  LSE  +   A+KLL+      C  D+ ++  V+  L  AG+   A  +  
Sbjct: 235 SIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHD 294

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +++ +    D      L+ GL + G   +A
Sbjct: 295 RMLLRDFTADALIQGYLMHGLCRMGKVDEA 324


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 153/646 (23%), Positives = 278/646 (43%), Gaps = 53/646 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           +R T+  +I    R+G L H       + K G + D  +   L+        V E++ + 
Sbjct: 93  NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152

Query: 115 -DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI---EPTRHTYNVMLWG 170
              M +LG      SY+ L K +    R   A    + M  + +    P   +Y+ ++ G
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           FF   +++     F +M  RGI  DVVTY T+I+G  + +  D AE +F +M +  ++P 
Sbjct: 213 FFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPN 272

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           + +Y  +I GY+++ +  + +R+ +EM +   KPN  TY +LL  LC  G+  E +    
Sbjct: 273 IDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFD 332

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            M+ + I P   +  + L G   K G L+   D+L  M+   I      + I    + K 
Sbjct: 333 SMIGKGIKPSVTTYGIMLHGYATK-GALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
            + D+A+ + +K+         Q  L  +A SY  +I  LC  G+   AE+ F Q++ +G
Sbjct: 392 GIIDKAMDIFNKM--------RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEG 443

Query: 411 VL-DPVAFNNLIRG----------------------H-------------SKEGNPDSAF 434
           V  D V F++L+ G                      H              KEG      
Sbjct: 444 VTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQ 503

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +V  +   GV  D  +Y  LI+ +   G   +A   L+ M+  G  P S  + +++   
Sbjct: 504 RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGY 563

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---V 551
            + GR+ +A    + M+  G+   +     IL  L       EA      M+ SG+   +
Sbjct: 564 CKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDI 623

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++ +L+ L +      A+K+      +   +++ ++  ++ ALL  G+  +A  +   
Sbjct: 624 YTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAA 683

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGEMSRGSQ 656
           I   G V +  +   ++  L +EG+ ++ D + S M +   +  SQ
Sbjct: 684 IPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 729



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 145/626 (23%), Positives = 275/626 (43%), Gaps = 57/626 (9%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L +    + A  +   M   GV+ + D +  LI  Y   G  +E V++ 
Sbjct: 237 DVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRML 296

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M   G + +  +Y +L   + + GR   A+ +F+ M+ +GI+P+  TY +ML G+   
Sbjct: 297 EEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATK 356

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L         M + GIS +   +N   + Y +   +D+A  +F +M+++ + P  +SY
Sbjct: 357 GALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSY 416

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I     + R DDA   F++M +  V P+ V +++L+ GLC   K  +V+++  EM+ 
Sbjct: 417 GALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLN 476

Query: 295 RYIPPKDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
             I P  N VF   +L   CK G +     ++ ++  + +  +   Y  LI+  C A   
Sbjct: 477 VGIHP--NIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTI 534

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           D A KLL+ +V   + L+P S       SYN ++   C  G+   A   FR+++  G+  
Sbjct: 535 DEASKLLEGMV--SVGLKPDSF------SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITP 586

Query: 413 -----------------------------------DPVAFNNLIRGHSKEGNPDSAFEIV 437
                                              D   +N ++ G  K    D A ++ 
Sbjct: 587 GVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMF 646

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           + +  +G+  +   +  +I + L+ G   DA     ++  +G       +R V+E+L E+
Sbjct: 647 QNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEE 706

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNF 554
           G ++    +  +M + G   N  ++  ++  LL RG +  A   L ++D    S      
Sbjct: 707 GSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTT 766

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
             L+S+ S       A  L      +  I++ A+   ++     A +  +AYS+  +++ 
Sbjct: 767 SMLISIFSSDEYQHHAKSLPK----KYRILNEANSSALIK---KARRIDDAYSLFREMLM 819

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQA 640
           KG   D  + + ++ GL Q G   +A
Sbjct: 820 KGLTPDVVTYNTILHGLFQTGRFSEA 845



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 137/610 (22%), Positives = 263/610 (43%), Gaps = 49/610 (8%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L+    +L  M   G+  +  +F +   +Y K GI+ +++ IF+ M+Q G+     SY
Sbjct: 357 GALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSY 416

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            AL   + + GR   A+  FN+M++EG+ P    ++ +++G     K E     F +M +
Sbjct: 417 GALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLN 476

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            GI  ++V +NT++    +  ++ E ++L   ++   + P VISY T+I G+      D+
Sbjct: 477 VGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDE 536

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP---KDNSVFM 306
           A ++ + M S  +KP++ +Y  LL G C AG++       R+M+   I P     N++  
Sbjct: 537 ASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILH 596

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L     ++   + A ++   MI      +   Y I++   CK+   D AIK+   L  K
Sbjct: 597 GLF----QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSK 652

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHS 425
                    L +   ++N MI  L   G+   A   F  +   G++ + V +  ++    
Sbjct: 653 --------GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLI 704

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           +EG+ +    +   M + G   ++     L+   L +G+ + A   L  + E   S  +S
Sbjct: 705 EEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAS 764

Query: 486 LFRSVMESLFEDG-----------------------------RVQTASRVMKSMVEKGVK 516
              S++ S+F                                R+  A  + + M+ KG+ 
Sbjct: 765 T-TSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLT 823

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            ++     IL  L   G   EA      M+ S +  N   ++ +L+ L +      A K+
Sbjct: 824 PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                 +   +++ ++  ++ ALL  G+  +A  +   I   G V D  +   +   L +
Sbjct: 884 FQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIE 943

Query: 634 EGNTKQADIL 643
           EG+ ++ D L
Sbjct: 944 EGSLEEFDGL 953



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 124/552 (22%), Positives = 247/552 (44%), Gaps = 31/552 (5%)

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRR-GRYMMAKR------YFNKMLSEG---IE 158
           +++K+FD +       SV +++ L   + R  GR             FN+M+ +    + 
Sbjct: 32  DALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVA 91

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA-EK 217
           P R TY++++  F     LE     F  +   G  +D +  N ++NG    K++ EA + 
Sbjct: 92  PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM---KSFDVKPNAVTYTALLP 274
           L   M E    P  +SY  ++KG    +RA++AL +   M   + +   PN V+Y+ ++ 
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G    G++ +   +  EM++R IPP D   +  ++   CK+   + A  V + MI   + 
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPP-DVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK 270

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                Y  LI  +     +   +++L+++        P+        +Y  ++ +LC NG
Sbjct: 271 PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGG----PKPN----CCTYGSLLNYLCKNG 322

Query: 395 QTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +A  FF  ++ KG+   V  +  ++ G++ +G      +++ +M   G+  +   + 
Sbjct: 323 RCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFN 382

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
               +Y + G    A    + M + G SP +  + +++++L + GRV  A      M+ +
Sbjct: 383 IFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINE 442

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           GV  ++ + + ++  L      E+       M+  G  PN   F+++L  L ++G+ +  
Sbjct: 443 GVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEG 502

Query: 571 VKLLDF--CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            +L+D   C+G     D+ SY  ++D    AG    A  +L  ++  G   D  S + L+
Sbjct: 503 QRLVDSIECMGVR--PDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 629 AGLNQEGNTKQA 640
            G  + G    A
Sbjct: 561 HGYCKAGRIDSA 572



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 213/477 (44%), Gaps = 28/477 (5%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           GV+ D   +  LI+ +   G + E+ K+ + M  +G++    SY+ L     + GR   A
Sbjct: 513 GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA 572

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
             +F KMLS GI P   TYN +L G F + +   A   + +M + G   D+ TYN ++NG
Sbjct: 573 YSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNG 632

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +   +DEA K+F  +  K ++  +I++  MI   +   R +DA+ +F  + +  +  N
Sbjct: 633 LCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQN 692

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD---NSVFMKLLGVQCKSGHLNAAA 322
            VTY  ++  L + G + E   +   M +    P     N++  +LL      G ++ A 
Sbjct: 693 VVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL----HRGDISRAG 748

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA------IKLLDKLVEKEIILRPQSTL 376
             L  +   +   EA    +LI  F   E    A       ++L++     +I + +   
Sbjct: 749 AYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRID 808

Query: 377 DM--------------EASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLI 421
           D               +  +YN ++  L   G+  +A E++   +  +  ++   +N ++
Sbjct: 809 DAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIL 868

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G  K    D AF++ + +  +G+  +   +  +I + L+ G   DA     ++  +G  
Sbjct: 869 NGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLV 928

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           P    +R V E+L E+G ++    +  +M + G   +  L+  ++  LL RG +  A
Sbjct: 929 PDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRA 985



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 106/520 (20%), Positives = 201/520 (38%), Gaps = 82/520 (15%)

Query: 27   YN-VLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            YN +LHG   A   + A   FR +   G+      T+  ++  L +  + + A+ + L+M
Sbjct: 556  YNTLLHGYCKAGRIDSAYSHFRKMLSNGI-TPGVVTYNTILHGLFQTKRFSEAKELYLNM 614

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G +WD   + +++    K   V E++K+F  +   G++ ++ +++ +   +L+ GR 
Sbjct: 615  INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A   F  + + G+     TY +++        LE     F  M+  G + +    N +
Sbjct: 675  EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 734

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE----------------- 245
            +        +  A    +++ E+N      + + +I  + + E                 
Sbjct: 735  VRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNE 794

Query: 246  -----------RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
                       R DDA  +F EM    + P+ VTY  +L GL   G+  E +++   M+ 
Sbjct: 795  ANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI- 853

Query: 295  RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
                                            +  +++I T    Y I++   CK+   D
Sbjct: 854  -------------------------------NSRTQMNIYT----YNIILNGLCKSNCVD 878

Query: 355  RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
             A K+   L  K         L +   ++N MI  L   G+   A   F  +   G++ D
Sbjct: 879  EAFKMFQSLCSK--------GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPD 930

Query: 414  PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
             V +  +     +EG+ +    +   M + G P D+     L+   L++G+ + A   L 
Sbjct: 931  VVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLS 990

Query: 474  SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
             + E   S  +S   S + SLF  G  Q  +   KS+ EK
Sbjct: 991  KLDEKNFSLEAST-TSELISLFSRGEYQHHA---KSLPEK 1026



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 9/215 (4%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q  + LV  +LH    S       +  ER   F+ +  T   +I I       +HA+   
Sbjct: 729 QMLNALVRRLLHRGDISRAGAYLSKLDERN--FSVEASTTSMLISIFSSDEYQHHAK--- 783

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             +PKK    +E     LI+   K   + ++  +F  M   G+   V +Y+ +   + + 
Sbjct: 784 -SLPKKYRILNEANSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 839

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           GR+  AK  +  M++   +   +TYN++L G   S  ++ A + F+ + S+G+ L+++T+
Sbjct: 840 GRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 899

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           N MI    +  + ++A  LFA +    + P V++Y
Sbjct: 900 NIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTY 934


>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
 gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 255/564 (45%), Gaps = 54/564 (9%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           L P F  + V   +   K  + AL+FF W  +   + H+ + ++  I++L   G L++ +
Sbjct: 59  LSPNF-VSFVLKSMELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVK 117

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            +       G   +      LI+S+G  G+V+E + ++  MK+ GV              
Sbjct: 118 SVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGV-------------- 163

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
                                EP+  TYN +L G   S+ +E+A R  E M++  I  DV
Sbjct: 164 ---------------------EPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDV 202

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VTYNTMI GY +  K  +A + F +M+ +N+ P  I+Y T+I+   A    D  L ++ E
Sbjct: 203 VTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHE 262

Query: 257 M--KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           M     ++ P+A  Y+ ++ GLC  GK VE   V  +M+++     + +++  L+    K
Sbjct: 263 MDENGLEIPPHA--YSLVIGGLCKEGKCVEGYAVFEKMIQKGC-KVNVAIYTALIDSNAK 319

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G++  A  + + M +  +  +   YG+++   CK+   D A++ L+            +
Sbjct: 320 CGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLE--------FCRVN 371

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
            + + A  Y+ +I  L   G+  +AE  F +++KKG   D   +N LI   +K G  D A
Sbjct: 372 GVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEA 431

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
               K M   G  +    Y  +I    R+ +  +A    D MI+ G +P ++ FR++   
Sbjct: 432 LAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIG 491

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-SVP 552
           L   G+V  A +++  +   GV         +L  L   G ++EA    D  +  G  +P
Sbjct: 492 LCLSGKVARACKLLDELAPMGVIPETAF-EDMLNVLCKAGRIKEACKLADGFVDRGREIP 550

Query: 553 N--FDSLLSVLSEKGKTIAAVKLL 574
                 L++ L + G    A+KL+
Sbjct: 551 GRVRTVLINALRKAGNADLALKLM 574



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 114/487 (23%), Positives = 213/487 (43%), Gaps = 21/487 (4%)

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           L+     F   +  G  ++V   N++I  +     ++E   ++  MKE  +EP++ +Y  
Sbjct: 113 LDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNF 172

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++ G V     + A R+ + M++  + P+ VTY  ++ G C  GK  +  +  R+M  R 
Sbjct: 173 LLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRN 232

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR--LSIPTEAGHYGILIENFCKAEMYD 354
           + P D   +M L+      G  +    +   M    L IP  A  Y ++I   CK     
Sbjct: 233 VAP-DKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHA--YSLVIGGLCKEGKCV 289

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
               + +K+++K           +  + Y  +I      G  G+A + F ++ K+G+  D
Sbjct: 290 EGYAVFEKMIQK--------GCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPD 341

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +  ++    K G  D A E ++     GV  +A  Y  LI+   + G   +A+   +
Sbjct: 342 VVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFE 401

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M++ G  P S  + +++++L + G+   A    K M ++G  + +     ++  L    
Sbjct: 402 EMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREH 461

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
             EEAL   D+M+  G  P    F +L   L   GK   A KLLD  L    +I   ++E
Sbjct: 462 KNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDE-LAPMGVIPETAFE 520

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
            +L+ L  AG+   A  +    +++G     +    LI  L + GN   AD+  +++  +
Sbjct: 521 DMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGN---ADLALKLMHSK 577

Query: 651 MSRGSQK 657
           +  G  +
Sbjct: 578 IGIGYDR 584



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 173/397 (43%), Gaps = 9/397 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  +I+ Y + G  Q++ + F  M+   V     +Y  L +     G + +    +++M 
Sbjct: 205 YNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMD 264

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+E   H Y++++ G     K       FE M  +G  ++V  Y  +I+   +   M 
Sbjct: 265 ENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMG 324

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  LF  MK++ +EP V++Y  ++       R D+A+   +  +   V  NA+ Y++L+
Sbjct: 325 EAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLI 384

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GL  AG++ E +K+  EMV++  PP D+  +  L+    K G  + A    K M     
Sbjct: 385 DGLGKAGRVHEAEKLFEEMVKKGCPP-DSYCYNALIDALAKCGKTDEALAFFKRMEDEGC 443

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y I+I    +    + A+K+ D +++K I   P       A+++  +   LC +
Sbjct: 444 DQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGIT--PT------AAAFRALSIGLCLS 495

Query: 394 GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           G+  +A     +L   GV+   AF +++    K G    A ++      RG         
Sbjct: 496 GKVARACKLLDELAPMGVIPETAFEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRT 555

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
            LI +  + G    A   + S I  G+    S+ R V
Sbjct: 556 VLINALRKAGNADLALKLMHSKIGIGYDRMGSVKRRV 592


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 241/529 (45%), Gaps = 18/529 (3%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F VLI+     G+++E+++ F  MK+  V    +S + L     + G+    KR+F  M
Sbjct: 66  LFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 121

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G  PT  TYN+M+        +E A   FE+MK RG+  D VTYN+MI+G+ +  ++
Sbjct: 122 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 181

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D+    F EMK+   EP VI+Y  +I  +    +    L  + EMK   +KPN V+Y+ L
Sbjct: 182 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 241

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +   C  G M +  K   +M    + P + + +  L+   CK G+L+ A  +   M+++ 
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT-YTSLIDANCKIGNLSDAFRLGNEMLQVG 300

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  LI+  C AE    A +L  K+    +I  P        +SYN +I     
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI--PN------LASYNALIHGFVK 352

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                +A     +L  +G+  D + +   I G       ++A  ++  M   G+  ++  
Sbjct: 353 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 412

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  L+++Y + G P +    LD M E         F  +++ L ++  V  A      + 
Sbjct: 413 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 472

Query: 512 EK-GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
              G++ N  +   +++ L     VE A    + M+Q G VP+   + SL+    ++G  
Sbjct: 473 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 532

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           + A+ L D        +DL +Y  ++  L    +   A S L +++ +G
Sbjct: 533 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 581



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 224/483 (46%), Gaps = 46/483 (9%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  MI+ + + G +  AR +  +M  +G+  D   +  +I+ +GK G + ++V  F+ M
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 191

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K +  E  V +Y+AL     + G+  +   ++ +M   G++P   +Y+ ++  F     +
Sbjct: 192 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 251

Query: 178 ETAIRFFEDMK-----------------------------------SRGISLDVVTYNTM 202
           + AI+F+ DM+                                     G+  +VVTY  +
Sbjct: 252 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 311

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G    ++M EAE+LF +M    + P + SY  +I G+V  +  D AL + +E+K   +
Sbjct: 312 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 371

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS-VFMKLLGVQCKSGHLNAA 321
           KP+ + Y   + GLC   K+   + V+ EM E  I  K NS ++  L+    KSG+    
Sbjct: 372 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI--KANSLIYTTLMDAYFKSGNPTEG 429

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +L  M  L I      + +LI+  CK ++  +A+   +++            L   A+
Sbjct: 430 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN-------DFGLQANAA 482

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            +  MI  LC + Q   A   F Q+++KG++ D  A+ +L+ G+ K+GN   A  +   M
Sbjct: 483 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 542

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  D  AY  L+       +   A++ L+ MI +G  P   L  SV++  +E G +
Sbjct: 543 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 602

Query: 501 QTA 503
             A
Sbjct: 603 DEA 605



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 222/521 (42%), Gaps = 57/521 (10%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           +DALF +++  G    A + F+KM    + P   + N +L  F    K +   RFF+DM 
Sbjct: 63  FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 122

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             G    V TYN MI+   +   ++ A  LF EMK + + P  ++Y +MI G+  V R D
Sbjct: 123 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 182

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           D +  F+EMK    +P+ +TY AL+   C  GK+    +  REM    + P   S +  L
Sbjct: 183 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS-YSTL 241

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   CK G +  A      M R+ +      Y  LI+  CK      A +L ++++    
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML---- 297

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKE 427
               Q  ++    +Y  +I  LC   +  +AE  F ++   GV+  +A +N LI G  K 
Sbjct: 298 ----QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 353

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
            N D A E++  +  RG+                                    P   L+
Sbjct: 354 KNMDRALELLNELKGRGI-----------------------------------KPDLLLY 378

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            + +  L    +++ A  VM  M E G+K N  +   +++A    G+  E L  +D M +
Sbjct: 379 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 438

Query: 548 ---SGSVPNFDSLLSVLSEKGKTIAAVKLL-----DFCLGRDCIIDLASYEKVLDALLAA 599
                +V  F  L+  L +      AV        DF L  +  I    +  ++D L   
Sbjct: 439 LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI----FTAMIDGLCKD 494

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +   A ++  ++++KG V D  +   L+ G  ++GN  +A
Sbjct: 495 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 535



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 135/281 (48%), Gaps = 6/281 (2%)

Query: 27  YNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           YN L HG   AKN + AL+    ++  G+   D   +   I  L  + K+  A+ ++ +M
Sbjct: 343 YNALIHGFVKAKNMDRALELLNELKGRGI-KPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 401

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G++ +  ++  L+++Y K G   E + + D MK+L +E +V ++  L   + +    
Sbjct: 402 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 461

Query: 143 MMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             A  YFN++ ++ G++     +  M+ G     ++E A   FE M  +G+  D   Y +
Sbjct: 462 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 521

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G  +   + EA  L  +M E  ++  +++YT+++ G     +   A    +EM    
Sbjct: 522 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 581

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
           + P+ V   ++L    + G + E  ++   +++  +   DN
Sbjct: 582 IHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDN 622


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/518 (23%), Positives = 236/518 (45%), Gaps = 13/518 (2%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K++  + ++ K +    +   M   G+  +   + +LI  + ++  +  ++ +   M +L
Sbjct: 86  KLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKL 145

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G E  + + ++L        R   A     +M+  G +P   T+N ++ G F   +   A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +   + M  +G   D+VTY  ++NG  +   +D A  L  +M++  IEP V+ Y T+I  
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +  +DAL +F EM +  ++PN VTY +L+  LC+ G+  +  ++L +M+ER I P 
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP- 324

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   F  L+    K G L  A  +   MI+ SI  +   Y  LI  FC  +  D A  + 
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + ++ K+    P         +YN +I+  C   +  +    FR++ ++G++ + V +  
Sbjct: 385 ELMISKDCF--PN------VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  +    D+A  + K M   GV  D   Y  L++     G+   A    + +    
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  ++E + + G+V+    +  S+  KGVK N+     ++     +G  EEA 
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
                M + G +P+   +++L+      G   A+ +L+
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 212/463 (45%), Gaps = 10/463 (2%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           +H+  T+  +I    R  +L+ A  +L  M K G + D      L+  +     + ++V 
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +   M ++G +    +++ L   + R  R   A    ++M+ +G +P   TY +++ G  
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               ++ A+   + M+   I   VV YNT+I+    +K +++A  LF EM  K I P V+
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y ++I+      R  DA R+  +M    + PN VT++AL+      GK+VE +K+  EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           ++R I P D   +  L+   C    L+ A  + + MI          Y  LI+ FCKA+ 
Sbjct: 353 IKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            D  ++L  ++ ++ ++            +Y  +I       +   A+I F+Q++  GVL
Sbjct: 412 VDEGMELFREMSQRGLV--------GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D + ++ L+ G    G  ++A  + + + R  +  D   Y  +IE   + G+  D    
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
             S+   G  P    + ++M      G  + A  + + M E+G
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 201/410 (49%), Gaps = 11/410 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L + G ++ A  +L  M +  ++    ++  +I++      V +++ +F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G+  +V +Y++L + +   GR+  A R  + M+   I P   T++ ++  F   
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL  A + +++M  R I  D+ TY+++ING+    ++DEA+ +F  M  K+  P V++Y
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+IKG+   +R D+ + +F EM    +  N VTYT L+ G   A +    Q V ++MV 
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D   +  LL   C +G +  A  V + + R  +  +   Y I+IE  CKA   +
Sbjct: 460 DGVLP-DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
               L   L  K +  +P         +Y  M+   C  G   +A+  FR++ ++G L D
Sbjct: 519 DGWDLFCSLSLKGV--KPN------VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
              +N LIR H ++G+  ++ E+++ M       DA   I L+ + L  G
Sbjct: 571 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVTNMLHDG 619



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 213/445 (47%), Gaps = 12/445 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           ++L+    HG + S+      + VE    +  D  T   +I  L R  + + A  ++  M
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMG--YQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG Q D   + +++    K+G +  ++ +   M+Q  +E  V  Y+ +   +      
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNV 272

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   F +M ++GI P   TYN ++       +   A R   DM  R I+ +VVT++ +
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+ + +  K+ EAEKL+ EM +++I+P + +Y+++I G+   +R D+A  +F+ M S D 
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN VTY  L+ G C A ++ E  ++ REM +R +   +   +  L+    ++   + A 
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL-VGNTVTYTTLIHGFFQARECDNAQ 451

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V K M+   +  +   Y IL++  C     + A+ + + L         +S ++ +  +
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL--------QRSKMEPDIYT 503

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN MI+ +C  G+       F  L  KGV  + V +  ++ G  ++G  + A  + + M 
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563

Query: 442 RRGVPRDADAYICLIESYLRKGEPA 466
             G   D+  Y  LI ++LR G+ A
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKA 588



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/492 (21%), Positives = 212/492 (43%), Gaps = 36/492 (7%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + ++V +F  M +     S+  +  L   I +  ++ +      +M + GI    +TY++
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    +L  A+     M   G   D+VT N+++NG+    ++ +A  L  +M E  
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P   ++ T+I G     RA +A+ + D M     +P+ VTY  ++ GLC  G +    
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +L++M +  I P    ++  ++   C   ++N A ++   M    I      Y  LI  
Sbjct: 242 SLLKKMEQGKIEPG-VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRP-----------------------------QSTLD 377
            C    +  A +LL  ++E++I   P                             + ++D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKI--NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
            +  +Y+ +I   C + +  +A+  F  ++ K    + V +N LI+G  K    D   E+
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
            + M +RG+  +   Y  LI  + +  E  +A+     M+ DG  P    +  +++ L  
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
           +G+V+TA  V + +    ++ ++     ++E +   G VE+       +   G  PN   
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538

Query: 554 FDSLLSVLSEKG 565
           + +++S    KG
Sbjct: 539 YTTMMSGFCRKG 550



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/516 (20%), Positives = 213/516 (41%), Gaps = 50/516 (9%)

Query: 175 LKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           LKL+ A+  F DM KSR     +V ++ +++   +  K D    L  +M+   I   + +
Sbjct: 60  LKLDDAVNLFGDMVKSRPFP-SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y+ +I  +    +   AL +  +M     +P+ VT  +LL G C   ++ +   ++ +MV
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           E    P D+  F  L+    +    + A  ++  M+      +   YGI++   CK    
Sbjct: 179 EMGYQP-DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           D A+ LL K+ + +I   P   +      YN +I  LC+      A   F ++  KG+  
Sbjct: 238 DLALSLLKKMEQGKI--EPGVVI------YNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           + V +N+LIR     G    A  ++  M  R +  +   +  LI++++++G+  +A+   
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D MI+    P    + S++       R+  A  + + M+ K    N+     +++     
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409

Query: 533 GHVEEALGRIDLMMQSGSVPN--------------------------------------F 554
             V+E +     M Q G V N                                      +
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
             LL  L   GK   A+ + ++        D+ +Y  +++ +  AGK  + + +   +  
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           KG   +  +   +++G  ++G  ++AD L R ++ E
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565


>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
 gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
          Length = 657

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 215/439 (48%), Gaps = 17/439 (3%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEH-ALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           L+  + AL P     +V  VLH  K++   + +FFRW   +G F H   T+ KM+ ILG+
Sbjct: 183 LEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLHILGK 242

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
             +      I+ +M K G     D F+V I+S+   G ++ +V +F++MK+ G +  V+S
Sbjct: 243 TRQFEMMVAIIQEMGKVGA-LSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVES 301

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           ++ L   +   G    A++ F+KM  +   P   +Y  ++  +  +  L  A R + +M 
Sbjct: 302 FNCLLVALANEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEML 360

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +G+  DVV +NTMI G  R ++  EA K+F  MK K   P V +YT +I+ +    + D
Sbjct: 361 EKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMD 420

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A+  F+EM+    +P+  TYT LL G  +A +M  V  VL EM ++  PP D   +  L
Sbjct: 421 MAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPP-DARTYNAL 479

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN-FCKAEMYDRAIKLLDKLVEKE 367
           + +       + AA + K MI+  +      Y +++++ F     Y     + +++  + 
Sbjct: 480 IKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRG 539

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSK 426
           I          + +SY   I     +G+  +A  +  +++ KG+  P + +N      SK
Sbjct: 540 ICP--------DVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAADFSK 591

Query: 427 EGNPDSAFEI---VKIMGR 442
            G PD  +E+   VK  G+
Sbjct: 592 AGKPDILYELALKVKFAGK 610



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 116/254 (45%), Gaps = 7/254 (2%)

Query: 404 RQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++ K G L   AF   I+  +  G   +A  + ++M + G     +++ CL+ +   +G
Sbjct: 254 QEMGKVGALSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEG 313

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              +A+   D M    +SP    + ++M +      +  A RV   M+EKG+K ++ +  
Sbjct: 314 LGREARQVFDKM-HGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHN 372

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            ++E LL      EAL   +LM   G  PN   +  L+    ++GK   A++  +     
Sbjct: 373 TMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEA 432

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            C  D+A+Y  +L     A +     ++L ++ +KG   D ++ + LI  L    N K  
Sbjct: 433 RCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLT---NRKMP 489

Query: 641 DILSRMIRGEMSRG 654
           D  +R+ +  + +G
Sbjct: 490 DDAARIYKKMIKKG 503



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/438 (19%), Positives = 166/438 (37%), Gaps = 54/438 (12%)

Query: 182 RFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           RFF     S G +   +TY  M++   + ++ +    +  EM +     ++ ++   IK 
Sbjct: 215 RFFRWATASGGFTHTTITYCKMLHILGKTRQFEMMVAIIQEMGKVGAL-SMDAFKVAIKS 273

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           + A     +A+ +F+ MK         ++  LL  L + G   E ++V  +M  +Y P  
Sbjct: 274 FAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQYSP-- 331

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+   C + +L  A  V   M                               L
Sbjct: 332 DLRSYTALMLAWCNARNLVEAGRVWNEM-------------------------------L 360

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNN 419
           +K ++ ++++            +N MI+ L    +  +A   F  +  KG    V  +  
Sbjct: 361 EKGMKPDVVV------------HNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTM 408

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LIR H K G  D A E  + M       D   Y CL+  Y            L+ M + G
Sbjct: 409 LIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKG 468

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P +  + ++++ L        A+R+ K M++KG++  +     ++++  + G    A+
Sbjct: 469 CPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFL-GDRNYAM 527

Query: 540 GRI--DLMMQSGSVPNFDSLLSVLS---EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           G    + M + G  P+ +S    ++     G+   A K ++  + +        Y K   
Sbjct: 528 GCAVWEEMHRRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAA 587

Query: 595 ALLAAGKTLNAYSILFKI 612
               AGK    Y +  K+
Sbjct: 588 DFSKAGKPDILYELALKV 605


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 157/648 (24%), Positives = 284/648 (43%), Gaps = 53/648 (8%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  +L   KN   A   F    R   + H    +  ++  L     +NH   I+  +  +
Sbjct: 13  VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMM 144
             + DED+   +I++YGK  +  +++ +F  M+++ G E +++SY+ L    +   +++ 
Sbjct: 73  ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
            +  F    + G+ P   TYNV++       + E A  F + M   G   DV +Y+T+IN
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV-------AVE------------ 245
              +  K+D+A +LF EM E+ + P V  Y  +I G++       A+E            
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252

Query: 246 -----------------RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
                            R DD L+I++ MK  + + +  TY++L+ GLCDAG + + + V
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             E+ ER     D   +  +LG  C+ G +  + ++ + M   +       Y ILI+   
Sbjct: 313 FNELDERK-ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLL 370

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +    D A  +          L P      + ++Y   I  LC NG   KA    +++  
Sbjct: 371 ENGKIDEATMIWR--------LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422

Query: 409 K-GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
             G LD  A+ ++I    K+   + A  +VK M + GV  ++     LI   +R     +
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A   L  M ++G  P    +  ++  L + G+   AS  +K M+E G K +L   + +L 
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542

Query: 528 ALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
            L     ++ AL      +QSG    V   + L+  L   GK   A+ ++     R+C  
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGL 631
           +L +Y  +++     G + N  ++++  M K G+  D  S + ++ GL
Sbjct: 603 NLVTYNTLMEGFFKVGDS-NRATVIWGYMYKMGLQPDIISYNTIMKGL 649



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 8/258 (3%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNH-DRETHLKMIEILGRVGKLNHARCIL 79
           F H L  N   G  N   AL   + VE +G   H D   +  +I+ L +  +L  A  ++
Sbjct: 400 FIHGLCVN---GYVNK--ALGVMQEVESSG--GHLDVYAYASIIDCLCKKKRLEEASNLV 452

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M K GV+ +  +   LI    +   + E+      M + G   +V SY+ L   + + 
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G++  A  +  +ML  G +P   TY+++L G     K++ A+  +      G+  DV+ +
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N +I+G     K+D+A  + A M+ +N    +++Y T+++G+  V  ++ A  I+  M  
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632

Query: 260 FDVKPNAVTYTALLPGLC 277
             ++P+ ++Y  ++ GLC
Sbjct: 633 MGLQPDIISYNTIMKGLC 650



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 1/292 (0%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK++ A  I   MP KG   D+  + + I      G V +++ +   ++  G    V +Y
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            ++   + ++ R   A     +M   G+E   H  N ++ G     +L  A  F  +M  
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G    VV+YN +I G  +  K  EA     EM E   +P + +Y+ ++ G     + D 
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           AL ++ +     ++ + + +  L+ GLC  GK+ +   V+  M  R     +   +  L+
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA-NLVTYNTLM 611

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
               K G  N A  +   M ++ +  +   Y  +++  C       A++  D
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 101/212 (47%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R  +L  A   L +M K G +     + +LI    K G   E+      M + G
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            +  +K+Y  L   + R  +  +A   +++ L  G+E     +N+++ G     KL+ A+
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M+ R  + ++VTYNT++ G+ +    + A  ++  M +  ++P +ISY T++KG 
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
                   A+  FD+ ++  + P   T+  L+
Sbjct: 650 CMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 76/177 (42%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L + GK   A   + +M + G + D   + +L+    +   +  +++++    Q G+E  
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V  ++ L   +   G+   A      M          TYN ++ GFF       A   + 
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWG 628

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            M   G+  D+++YNT++ G    + +  A + F + +   I PTV ++  +++  V
Sbjct: 629 YMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 70/149 (46%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D +T+  ++  L R  K++ A  +     + G++ D  M  +LI      G + +++ + 
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+      ++ +Y+ L +   + G    A   +  M   G++P   +YN ++ G  + 
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMI 203
             +  A+ FF+D ++ GI   V T+N ++
Sbjct: 653 RGVSYAMEFFDDARNHGIFPTVYTWNILV 681


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 150/625 (24%), Positives = 285/625 (45%), Gaps = 16/625 (2%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  VL    +   AL +F  +       H  ET   M+E L    K+     +   M KK
Sbjct: 92  VLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKK 151

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
            ++ D D +  + ++   +G +++   + + M++ G   +  SY+ L  L+++ G    A
Sbjct: 152 IIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEA 211

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
              + +M+SEG++P+  TY+ ++         E  +   ++M+  G+  +V T+   I  
Sbjct: 212 LEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRV 271

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             R  K+DEA ++F  M ++   P +++YT +I       + ++A  +F +MK+   KP+
Sbjct: 272 LGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPD 331

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
            V Y  LL    D G +   ++   +M  + Y+P  D   F  L+ V CK+   + A   
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP--DVVTFTILVDVLCKARDFDEAFAT 389

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              M +  I      Y  LI    +A   + A+KLL  +  + + ++P       A +YN
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM--ESVGVQPT------AYTYN 441

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
             I +   +G+TGKA   F ++  KG++ + VA N  +   ++ G    A  +   +   
Sbjct: 442 IFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  D+  Y  +++ Y + G+  +A   L  MI +G  P   +  S+++SL++ GRV  A
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
            ++   M +  +   +     +L  L   G V++A+   + M++    PN   F++LL  
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDC 621

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
             +  +   A+K+       DC  D+ +Y  V+  L+   K  +A+   F  ++K    D
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF-WFFHQLKKSMHPD 680

Query: 621 WKSSDKLIAGLNQEGNTKQADILSR 645
             +   L+ GL + G    A  ++R
Sbjct: 681 HVTICTLLPGLVKCGQIGDAISIAR 705



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 145/614 (23%), Positives = 270/614 (43%), Gaps = 47/614 (7%)

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            L  +G+L  A+ +   + + G+  D   + ++++ Y K G V E+V +   M + G E  
Sbjct: 482  LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
            V   ++L   + + GR   A + F++M    + PT  TYN +L G     +++ AI  FE
Sbjct: 542  VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
             M  +  S + +++NT+++ + +  +++ A K+F++M   + +P V++Y T+I G +   
Sbjct: 602  SMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKEN 661

Query: 246  RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
            + + A   F ++K   + P+ VT   LLPGL   G++ +   + R+ + +     + S +
Sbjct: 662  KVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFW 720

Query: 306  MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
              L+G       ++ A    + ++   I  E      L+   CK +    A ++ DK  +
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTK 780

Query: 366  KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
            K   L    TL    +SYN +I  L     T KA   F+ +   G   D   FN L+  H
Sbjct: 781  K---LGISPTL----ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 425  SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK---------------------- 462
             K G     FE+ K M  R    DA  Y  +I S  +                       
Sbjct: 834  GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 463  -------------GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
                         G   +A    + M + G  P  ++F  ++    + G  +TA ++ K 
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 510  MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTI- 568
            MV +G++ +L     +++ L + G V+EAL   + +  +G  P+F +   +++  GK+  
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 569  --AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
               A+ L +    R  + DL +Y  ++  L  AG    A  +  ++   G   D  + + 
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073

Query: 627  LIAGLNQEGNTKQA 640
            LI G +   N + A
Sbjct: 1074 LIRGYSLSENPEHA 1087



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 141/623 (22%), Positives = 268/623 (43%), Gaps = 15/623 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + ++ + L  A   E+A + F  ++  G    D+  ++ +++     G L+  +     M
Sbjct: 300 YTVLIDALCNAGQLENAKELFVKMKANG-HKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G   D   F +L++   K     E+   FD+M++ G+  ++ +Y+ L   +LR GR 
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +    M S G++PT +TYN+ +  F  S +   A+  FE MK++GI  ++V  N  
Sbjct: 419 EDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           +       ++ EA+ +F  ++E  + P  ++Y  M+K Y  V + D+A+ +  EM     
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P+ +   +L+  L  AG++ E  ++   M +  + P     +  LL    K G +  A 
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPT-VVTYNTLLSGLGKEGRVQKAI 597

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++ ++MI          +  L++ FCK +  + A+K+  K+   +   +P      +  +
Sbjct: 598 ELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC--KP------DVLT 649

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVK-IMG 441
           YN +I  L    +   A  FF QL K    D V    L+ G  K G    A  I +  M 
Sbjct: 650 YNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMY 709

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           +     +   +  L+   L + E   A    + ++ +G     S    ++  L +  R  
Sbjct: 710 QVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKREL 769

Query: 502 TASRVMKSMVEK-GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
            A ++     +K G+   L     ++  LL   + E+A      M   G  P+   F+ L
Sbjct: 770 YAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNML 829

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           L+V  + GK     +L    + R C  D  +Y  V+ +L  +     A    + ++    
Sbjct: 830 LAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDF 889

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA 640
               ++   LI GL + G  ++A
Sbjct: 890 RPTPRTYGPLIDGLAKVGRLEEA 912



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 130/250 (52%), Gaps = 1/250 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N+V + L  + N + AL FF  +  +  F     T+  +I+ L +VG+L  A  +  +M
Sbjct: 861  YNIVISSLAKSNNLDKALDFFYDLVSSD-FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G + +  +F +LI  YGK G  + + ++F  M   G+   +KSY  L   +   GR 
Sbjct: 920  SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A  YFN++ S G++P    YN ++ G   S ++E A+  + +M++RGI  D+ TYN++
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            +        +++A++++ E++   +EP V +Y  +I+GY   E  + A  ++  M     
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099

Query: 263  KPNAVTYTAL 272
             PN  TY  L
Sbjct: 1100 NPNIGTYAQL 1109



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 158/345 (45%), Gaps = 11/345 (3%)

Query: 110  SVKIFD-IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
            + +IFD   K+LG+  ++ SY+ L   +L       A   F  M + G  P   T+N++L
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 169  WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
                 S K+      +++M SR    D +TYN +I+   +   +D+A   F ++   +  
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 229  PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
            PT  +Y  +I G   V R ++A+R+F+EM  +  KPN   +  L+ G    G      ++
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 289  LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             + MV   I P D   +  L+   C +G ++ A      +    +  +   Y  +I    
Sbjct: 951  FKRMVNEGIRP-DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLG 1009

Query: 349  KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
            K++  + A+ L +++  + I+  P      +  +YN ++ +L   G   +A+  + +L  
Sbjct: 1010 KSQRMEEALALYNEMRNRGIV--P------DLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061

Query: 409  KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
             G+  D   +N LIRG+S   NP+ A+ + K M   G   +   Y
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 119/514 (23%), Positives = 209/514 (40%), Gaps = 65/514 (12%)

Query: 25   LVYN-VLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
            L YN V++G        HA  FF  ++++   + D  T   ++  L + G++  A  I  
Sbjct: 648  LTYNTVIYGLIKENKVNHAFWFFHQLKKS--MHPDHVTICTLLPGLVKCGQIGDAISIAR 705

Query: 81   DMPKK------GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
            D   +         W++ M   L+E+   K I+     + +     G+ R       L +
Sbjct: 706  DFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLN-----GICREDSFLIPLVR 760

Query: 135  LILRRGRYMMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
            ++ +  R + A + F+K   + GI PT  +YN ++         E A   F+DMK+ G +
Sbjct: 761  VLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCA 820

Query: 194  LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
             D  T+N ++  + +  K+ E  +L+ EM  +  +P  I+Y  +I         D AL  
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880

Query: 254  FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
            F ++ S D +P   TY  L+ GL   G++ E  ++  EM +    P              
Sbjct: 881  FYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP-------------- 926

Query: 314  KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
                 N A                  + ILI  + K    + A +L  ++V + I  RP 
Sbjct: 927  -----NCAI-----------------FNILINGYGKIGDTETACQLFKRMVNEGI--RP- 961

Query: 374  STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPD 431
                 +  SY  ++  LC  G+  +A  +F +L   G LDP  +A+N +I G  K    +
Sbjct: 962  -----DLKSYTILVDCLCLAGRVDEALYYFNELKSTG-LDPDFIAYNRIINGLGKSQRME 1015

Query: 432  SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
             A  +   M  RG+  D   Y  L+ +    G    AK   + +   G  P    + +++
Sbjct: 1016 EALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075

Query: 492  ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
                     + A  V K+M+  G   N+   A++
Sbjct: 1076 RGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 90/181 (49%), Gaps = 1/181 (0%)

Query: 24   NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            N++ N      ++E A Q F+ +   G+   D +++  +++ L   G+++ A     ++ 
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGI-RPDLKSYTILVDCLCLAGRVDEALYYFNELK 990

Query: 84   KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
              G+  D   +  +I   GK   ++E++ +++ M+  G+   + +Y++L   +   G   
Sbjct: 991  STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVE 1050

Query: 144  MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
             AKR + ++   G+EP   TYN ++ G+ LS   E A   +++M   G + ++ TY  + 
Sbjct: 1051 QAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLP 1110

Query: 204  N 204
            N
Sbjct: 1111 N 1111


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/567 (23%), Positives = 259/567 (45%), Gaps = 48/567 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  ++  Y KKG  + ++ + + M++  ++  + +Y+ +   + R  R   A     +M 
Sbjct: 192 YNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMR 251

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            + + P   TYN ++ GFF   K+  A   F  M  + +   V TY TMI+GY R +++D
Sbjct: 252 KDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRID 311

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  + +EM+   + P+ ++Y+ ++ GY  V     AL +  ++KS  +  N    T L+
Sbjct: 312 KALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILI 371

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  G++ + +++L+ M+E  I P D   +  L+   C+   ++   ++L  M +  I
Sbjct: 372 DGFCQVGEISKAKQILKSMLEDGIDP-DVVTYSALINGMCRMAKMHETKEILSRMQKSGI 430

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  LI  +CKA     A+K                              H    
Sbjct: 431 LPNDVLYTTLICYYCKAGYVKVALK------------------------------HF--- 457

Query: 394 GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
                 +I+ R L    V +PV  N L+R   +EG    A    + M R  +  ++ ++ 
Sbjct: 458 -----VDIYRRGL----VANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFN 508

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           C+I+SY  +G+  +A +  D M+  GHSP    +++++  L + G +  A + M  +++ 
Sbjct: 509 CIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDI 568

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAA 570
               +      +L  +   G ++EAL   + M+++  +P+  +   LLS    KGK + A
Sbjct: 569 PSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPA 628

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIA 629
           + +L   L +  + D  +Y  +L+ L+  G+   A  +  +I+ K G+  D  + + L+ 
Sbjct: 629 LVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMN 688

Query: 630 GLNQEGNTKQAD-ILSRMIRGEMSRGS 655
           G  + GN      ++S M + E+   S
Sbjct: 689 GYLKGGNVNTIKRMMSDMYQNEVYPNS 715



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 227/461 (49%), Gaps = 13/461 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++    +V  L  A  +++D+  +G+  ++ M  +LI+ + + G + ++ +I   M
Sbjct: 331 TYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSM 390

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G++  V +Y AL   + R  +    K   ++M   GI P    Y  ++  +  +  +
Sbjct: 391 LEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYV 450

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A++ F D+  RG+  + V +N ++  + R   + EAE     M   NI    +S+  +
Sbjct: 451 KVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCI 510

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  Y    +  +A  ++D+M  +   PN  TY  LL GLC  G +V+ ++ +  +++  I
Sbjct: 511 IDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLD--I 568

Query: 298 PPK-DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           P   D   F  LL   CK G L+ A D+ + M++ +   +   Y IL+  FC+      A
Sbjct: 569 PSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPA 628

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL--DP 414
           + +L  ++EK ++  P +       +Y  ++  L + GQ   A   F++++ K  L  D 
Sbjct: 629 LVMLQMMLEKGVV--PDTV------AYTCLLNGLINEGQVKAASYVFQEIICKEGLYADC 680

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           +A+N+L+ G+ K GN ++   ++  M +  V  ++ +Y  L+  Y+++G+ + +      
Sbjct: 681 IAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKY 740

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           M+  G  P +  +R ++  L E G +  A + ++ MV +G+
Sbjct: 741 MVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGI 781



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 139/596 (23%), Positives = 252/596 (42%), Gaps = 84/596 (14%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  MI+ L R+ +   A  +L  M K  +  DE  +  LI  +  +G +  +  +F
Sbjct: 223 DIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVF 282

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M +  +  SV +Y  +     R  R   A    ++M   G+ P+  TY+ +L G+   
Sbjct: 283 NHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKV 342

Query: 175 LKLETAIRFFEDMKSRGISL-----------------------------------DVVTY 199
             L  A+    D+KSRGI++                                   DVVTY
Sbjct: 343 SMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTY 402

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE--- 256
           + +ING  R  KM E +++ + M++  I P  + YTT+I  Y        AL+ F +   
Sbjct: 403 SALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYR 462

Query: 257 --------------------------------MKSFDVKPNAVTYTALLPGLCDAGKMVE 284
                                           M   ++  N+V++  ++   C  GK+VE
Sbjct: 463 RGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVE 522

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
              V  +MV RY    +   +  LL   C+ GHL  A   +  ++ +    +   +  L+
Sbjct: 523 AFSVYDDMV-RYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALL 581

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
              CK    D A+ + +K+V+   +  P      +  +Y  ++   C  G+   A +  +
Sbjct: 582 LGICKYGTLDEALDICEKMVKNNCL--P------DIHTYTILLSGFCRKGKILPALVMLQ 633

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK-IMGRRGVPRDADAYICLIESYLRK 462
            +++KGV+ D VA+  L+ G   EG   +A  + + I+ + G+  D  AY  L+  YL+ 
Sbjct: 634 MMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKG 693

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G     K  +  M ++   P S+ +  +M    + G+   +  + K MV KG++ +    
Sbjct: 694 GNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTY 753

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
             ++  L   G ++ A+  ++ M+  G  P+   FD L++  SEK K   A++L +
Sbjct: 754 RLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFN 809



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 113/525 (21%), Positives = 235/525 (44%), Gaps = 18/525 (3%)

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
            +D+ ++G+  +  +   L+ ++ ++G++ E+      M ++ +  +  S++ +      
Sbjct: 457 FVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCH 516

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           RG+ + A   ++ M+  G  P   TY  +L G      L  A +F   +     ++D  T
Sbjct: 517 RGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKT 576

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           +N ++ G  ++  +DEA  +  +M + N  P + +YT ++ G+    +   AL +   M 
Sbjct: 577 FNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMML 636

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
              V P+ V YT LL GL + G++     V +E++ +     D   +  L+    K G++
Sbjct: 637 EKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNV 696

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           N    ++  M +  +   +  Y IL+  + K   + +++ L   +V K I  RP +    
Sbjct: 697 NTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGI--RPDNV--- 751

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
              +Y  +I  L   G    A  F  +++ +G+  D + F+ LI   S++    +A  + 
Sbjct: 752 ---TYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLF 808

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M    +   +  +  +I   +RK     +   L  M++ G  P  + + +++ +    
Sbjct: 809 NCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRV 868

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NF 554
           G +  A R+ + M   G+       + I+  L   G +EEA+     MM+SG VP    F
Sbjct: 869 GEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATF 928

Query: 555 DSLLSVLSEKGKTIAAV---KLLDFCLGRDCIIDLASYEKVLDAL 596
            +L+  L ++ K   A+   +L++ C  +   +D+ SY  ++  L
Sbjct: 929 TTLMHSLCKESKIADALHLKRLMELCRLK---VDVVSYNVLITGL 970



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 223/504 (44%), Gaps = 55/504 (10%)

Query: 79   LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
            LLD+P      DE  F  L+    K G + E++ I + M +      + +Y  L     R
Sbjct: 565  LLDIPS---AVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCR 621

Query: 139  RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR-GISLDVV 197
            +G+ + A      ML +G+ P    Y  +L G     +++ A   F+++  + G+  D +
Sbjct: 622  KGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCI 681

Query: 198  TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
             YN+++NGY +   ++  +++ ++M +  + P   SY  ++ GYV   +   +L ++  M
Sbjct: 682  AYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYM 741

Query: 258  KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF------------ 305
                ++P+ VTY  L+ GL + G +    K L +MV   I P D  VF            
Sbjct: 742  VRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFP-DKLVFDILITSFSEKSK 800

Query: 306  ----------MKLLGVQCKS-------------GHLNAAADVLKAMIRLSIPTEAGHYGI 342
                      MK L +   S              +L+ + +VL  M+++ +     HY  
Sbjct: 801  MHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIA 860

Query: 343  LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
            L+   C+    DRA +L +++  K I + P    +      + +I+ LC  G+  +A I 
Sbjct: 861  LVNAKCRVGEIDRAFRLKEEM--KAIGIVPAEVAE------SSIIRGLCRCGKLEEAVIV 912

Query: 403  FRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
            F  +M+ G++  VA F  L+    KE     A  + ++M    +  D  +Y  LI    +
Sbjct: 913  FSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCK 972

Query: 462  KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
                +DA      M   G  P  + + ++  +++  GR+Q    +++ + E+G+      
Sbjct: 973  DKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAF-- 1030

Query: 522  VAKILEALLMRGHVEEALGRIDLM 545
              K LE L  R  +E+A+ R++++
Sbjct: 1031 --KQLENLERR--MEDAIRRLNMI 1050



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 120/560 (21%), Positives = 237/560 (42%), Gaps = 49/560 (8%)

Query: 39   ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
            AL+ F  + R GL   +   H  ++    R G +  A      M +  + ++   F  +I
Sbjct: 453  ALKHFVDIYRRGLVA-NPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCII 511

Query: 99   ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY---------- 148
            +SY  +G + E+  ++D M + G   +V +Y  L + + + G  + AK++          
Sbjct: 512  DSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSA 571

Query: 149  -----FN--------------------KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
                 FN                    KM+     P  HTY ++L GF    K+  A+  
Sbjct: 572  VDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVM 631

Query: 184  FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK-NIEPTVISYTTMIKGYV 242
             + M  +G+  D V Y  ++NG     ++  A  +F E+  K  +    I+Y +++ GY+
Sbjct: 632  LQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYL 691

Query: 243  AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                 +   R+  +M   +V PN+ +Y  L+ G    G+  +   + + MV + I P + 
Sbjct: 692  KGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNV 751

Query: 303  SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
            +  + +LG+  + G ++ A   L+ M+   I  +   + ILI +F +      A++L + 
Sbjct: 752  TYRLLILGLS-ECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNC 810

Query: 363  LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
            +  K + L P S       +++ MI  L       ++     ++++ G L P    +  L
Sbjct: 811  M--KCLHLSPSS------KTFSAMINGLIRKNYLDQSHEVLHEMLQVG-LQPNHTHYIAL 861

Query: 421  IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
            +    + G  D AF + + M   G+     A   +I    R G+  +A     +M+  G 
Sbjct: 862  VNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGM 921

Query: 481  SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
             P  + F ++M SL ++ ++  A  + + M    +K ++     ++  L    H+ +AL 
Sbjct: 922  VPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALD 981

Query: 541  RIDLMMQSGSVPNFDSLLSV 560
                M   G  PN  + +++
Sbjct: 982  LYGEMKSKGLWPNVTTYITL 1001



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 146/315 (46%), Gaps = 1/315 (0%)

Query: 70   GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
            G +N  + ++ DM +  V  +   + +L+  Y K+G   +S+ ++  M + G+     +Y
Sbjct: 694  GNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTY 753

Query: 130  DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
              L   +   G   +A ++  KM+ EGI P +  +++++  F    K+  A+R F  MK 
Sbjct: 754  RLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKC 813

Query: 190  RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
              +S    T++ MING  R   +D++ ++  EM +  ++P    Y  ++     V   D 
Sbjct: 814  LHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDR 873

Query: 250  ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
            A R+ +EMK+  + P  V  ++++ GLC  GK+ E   V   M+   + P   + F  L+
Sbjct: 874  AFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPT-VATFTTLM 932

Query: 310  GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
               CK   +  A  + + M    +  +   Y +LI   CK +    A+ L  ++  K + 
Sbjct: 933  HSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLW 992

Query: 370  LRPQSTLDMEASSYN 384
                + + +  + Y+
Sbjct: 993  PNVTTYITLTGAMYS 1007



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 99/473 (20%), Positives = 179/473 (37%), Gaps = 64/473 (13%)

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           + +  +IK YV   +  DA      M     K + V   ++L  L + G+   V   LRE
Sbjct: 86  VVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFLRE 145

Query: 292 MVERYIP---------------------------------PKDNSVFMKLLGVQCKSGHL 318
            + R  P                                   +++ +  +L    K G  
Sbjct: 146 SLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRF 205

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL-----DKLVEKEIILRP- 372
            AA  VL+ M R SI  +   Y I+I+  C+ +   RA  LL     D L   E      
Sbjct: 206 KAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTL 265

Query: 373 ---------------------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
                                + TL    ++Y  MI   C N +  KA     ++   GV
Sbjct: 266 INGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGV 325

Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
           +   + ++ L+ G+ K      A +++  +  RG+  +      LI+ + + GE + AK 
Sbjct: 326 MPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQ 385

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L SM+EDG  P    + +++  +    ++     ++  M + G+  N  L   ++    
Sbjct: 386 ILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYC 445

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G+V+ AL     + + G V N    ++LL     +G    A     +    +   +  
Sbjct: 446 KAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSV 505

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           S+  ++D+    GK + A+S+   ++  G   +  +   L+ GL Q G+  QA
Sbjct: 506 SFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQA 558



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 119/248 (47%), Gaps = 5/248 (2%)

Query: 21   FDHNLVYNVL---HGAKNSEH-ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
            F   LV+++L      K+  H AL+ F  ++   L +   +T   MI  L R   L+ + 
Sbjct: 782  FPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHL-SPSSKTFSAMINGLIRKNYLDQSH 840

Query: 77   CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
             +L +M + G+Q +   +  L+ +  + G +  + ++ + MK +G+  +  +  ++ + +
Sbjct: 841  EVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGL 900

Query: 137  LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
             R G+   A   F+ M+  G+ PT  T+  ++       K+  A+     M+   + +DV
Sbjct: 901  CRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDV 960

Query: 197  VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
            V+YN +I G  + K + +A  L+ EMK K + P V +Y T+     +  R  +   + ++
Sbjct: 961  VSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLED 1020

Query: 257  MKSFDVKP 264
            ++   + P
Sbjct: 1021 IEERGLIP 1028



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/273 (20%), Positives = 121/273 (44%), Gaps = 4/273 (1%)

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           ++ ++ N ++  LC NG+  KAE   +++    + +   +N ++  + K+G   +A  ++
Sbjct: 153 LDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRFKAALCVL 212

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           + M R  +  D   Y  +I+   R    A A   L  M +D  +P    + +++   F +
Sbjct: 213 EDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGE 272

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G++  A  V   M+ + +  ++     +++       +++AL  +  M  +G +P+   +
Sbjct: 273 GKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTY 332

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            +LL+   +      A+ L+     R   I+      ++D     G+   A  IL  ++E
Sbjct: 333 SALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLE 392

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
            G   D  +   LI G+ +     +  +ILSRM
Sbjct: 393 DGIDPDVVTYSALINGMCRMAKMHETKEILSRM 425


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 156/624 (25%), Positives = 282/624 (45%), Gaps = 29/624 (4%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL F   V   G F  ++ ++  +I  L + G+      +L  +    V+ D  M+  +I
Sbjct: 152 ALYFHDQVVAQG-FQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTII 210

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            S  K  ++ ++  ++  M   G+  +V +Y+AL       G    A    N+M  + I 
Sbjct: 211 HSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNIN 270

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   T+N ++       K++ A      M    I  DVVTYN++I+GY    K+  A+ +
Sbjct: 271 PDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYV 330

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M +  + P V +YTTMI G    +  D+A+ +F+EMK  ++ P+ VTYT+L+ GLC 
Sbjct: 331 FYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCK 390

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
              +     + ++M E+ I P D   +  LL   CK G L  A +  + ++         
Sbjct: 391 NHHLERAIALCKKMKEQGIQP-DVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQ 449

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y ++I   CKA+++  A+ L  K+  K  +  P      +A ++  +I  L    +  K
Sbjct: 450 TYNVMINGLCKADLFGEAMDLKSKMEGKGCM--P------DAITFKTIICALFEKDENDK 501

Query: 399 AEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           AE   R+++ +G+ +           +++     A  ++ +M +  +  D   Y  L++ 
Sbjct: 502 AEKILREMIARGLQE-----------ARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDG 550

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           Y    E   AK    SM + G +P    +  +++ L +   V  A  + + M  K +  N
Sbjct: 551 YFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPN 610

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLD 575
           +     +++AL    H+E A+  +  M + G  P+  S   LL  L + G+   A ++  
Sbjct: 611 IVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQ 670

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL-NQE 634
             L +   +++  Y  +++ L  AG    A  +  K+ +KG + D  + D +I  L  ++
Sbjct: 671 RLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKD 730

Query: 635 GNTKQADILSRMIRGEMSRGSQKE 658
            N K   IL  MI    +RG  KE
Sbjct: 731 ENDKAEKILXEMI----ARGLMKE 750



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 114/515 (22%), Positives = 212/515 (41%), Gaps = 49/515 (9%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F++ML     P    +N +L     +    T I  F+  +S G + D+ T N ++N +  
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
              +  A  + A + ++   P  I+  T+IKG         AL   D++ +   + N V+
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ GLC  G+   V ++LR++    + P D  ++  ++   CK+  L  A D+   M
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKP-DVVMYNTIIHSLCKNKLLGDACDLYSEM 229

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           I   I      Y  L+  FC       A  LL+++  K I               NP   
Sbjct: 230 IVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNI---------------NP--- 271

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
                                   D   FN LI    KEG   +A  ++ +M +  +  D
Sbjct: 272 ------------------------DVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPD 307

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  LI+ Y    +  +AK    SM + G +P    + ++++ L ++  V  A  + +
Sbjct: 308 VVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFE 367

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKG 565
            M  K +  ++     +++ L    H+E A+     M + G  P+  S   LL  L + G
Sbjct: 368 EMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGG 427

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +   A +     L +   +++ +Y  +++ L  A     A  +  K+  KG + D  +  
Sbjct: 428 RLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFK 487

Query: 626 KLIAGLNQEGNTKQADILSRMIRGEMSRGSQKEKK 660
            +I  L ++    +A+   +++R  ++RG Q+ +K
Sbjct: 488 TIICALFEKDENDKAE---KILREMIARGLQEARK 519



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 130/638 (20%), Positives = 245/638 (38%), Gaps = 111/638 (17%)

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
           +V  FD M  +        ++ +   ++    Y      F K  S G  P   T N+++ 
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYN----------------------------- 200
            F     +  A     ++  RG   + +T N                             
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 201 ------TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
                 T+ING  +  +     +L  +++  +++P V+ Y T+I      +   DA  ++
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM    + PN VTY AL+ G C  G + E   +L EM  + I P D   F  L+    K
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINP-DVCTFNTLIDALGK 285

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR--P 372
            G + AA  VL  M++  I  +   Y  LI+ +            L+K+   + +     
Sbjct: 286 EGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY----------FFLNKVKNAKYVFYSMA 335

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPD 431
           QS +     +Y  MI  LC      +A   F ++  K ++ D V + +LI G  K  + +
Sbjct: 336 QSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLE 395

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS---------- 481
            A  + K M  +G+  D  +Y  L+++  + G   +AK     ++  G+           
Sbjct: 396 RAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMI 455

Query: 482 -------------------------PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
                                    P +  F++++ +LFE      A ++++ M+ +G++
Sbjct: 456 NGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQ 515

Query: 517 ENLDL---VAKILEALLMRGHVEEALGRIDLMM--------------------QSGSVPN 553
           E   +    AKI+ A++ +  ++  +     +M                    Q G  PN
Sbjct: 516 EARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPN 575

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              +  ++  L +K     A+ L +    ++   ++ +Y  ++DAL        A ++L 
Sbjct: 576 VQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLK 635

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           ++ E G   D  S   L+ GL + G  + A +I  R++
Sbjct: 636 EMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLL 673


>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 472

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 219/482 (45%), Gaps = 40/482 (8%)

Query: 26  VYNVLHGAKNSEHALQFF--RWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           V  ++   K+ E ++  F     E A  + HD+ +   M+  L    K   A  I+  M 
Sbjct: 19  VIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAEDIVARMK 78

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            +     ED+   +   YG+     +S+++F  MK    + S K+Y  +  +++   +  
Sbjct: 79  IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLN 138

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS-LKLETAIRFFEDMKSRGISLDVVTYNTM 202
           +A +++  M   G+ PT  + NV++     +   ++  ++ F +M  RG   D  TY T+
Sbjct: 139 LAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTL 198

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  RF ++DEA+KLF EM EK+  PTV++YT++I G    +  D+A+R  +EMK   +
Sbjct: 199 ISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGI 258

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +PN  TY++L+ GLC  G+ ++  ++   M+ R   P +   +  L+   CK   +  A 
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP-NMVTYTTLITGLCKEQKIQEAV 317

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++L  M    +  +AG YG +I  FC    +  A   LD+++   I    + T ++   +
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPN-RLTWNIHVKT 376

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
            N +++ LC N                                    P  AF +   M  
Sbjct: 377 SNEVVRGLCTN-----------------------------------YPSRAFTLYLSMRS 401

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           RG+  + +    L++   +KGE   A   +D ++ DG  P    ++ ++    ++  V  
Sbjct: 402 RGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGE 461

Query: 503 AS 504
           AS
Sbjct: 462 AS 463



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 192/432 (44%), Gaps = 31/432 (7%)

Query: 177 LETAIRFFEDMKS---RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           +E +I  F+   +    G   D  ++  M++      K   AE + A MK   IE  V+S
Sbjct: 29  VEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAEDIVARMK---IENCVVS 85

Query: 234 ---YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
                ++ +GY  V R  D+LR+F +MK FD  P+   Y  +L  L +  ++    K  +
Sbjct: 86  EDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYK 145

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKS-GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            M E  +PP   S+ + L+   C++ G ++A   +   M +     ++  YG LI   C+
Sbjct: 146 NMREIGLPPTVASLNV-LIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCR 204

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
               D A KL  ++VEK+    P         +Y  +I  LC +    +A  +  ++  K
Sbjct: 205 FGRIDEAKKLFTEMVEKDC--APT------VVTYTSLINGLCGSKNVDEAMRYVEEMKGK 256

Query: 410 GVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G+   V  +++L+ G  K+G    A E+ ++M  RG   +   Y  LI    ++ +  +A
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN---LDLVAKI 525
              LD M   G  P + L+  V+       + + A+  +  M+  G+  N    ++  K 
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKT 376

Query: 526 LEALLMRGHVEEALGR---IDLMMQSGS----VPNFDSLLSVLSEKGKTIAAVKLLDFCL 578
              ++ RG       R   + L M+S      V   DSL+  L +KG+   AV+L+D  +
Sbjct: 377 SNEVV-RGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIV 435

Query: 579 GRDCIIDLASYE 590
              CI +  +++
Sbjct: 436 TDGCIPNKGTWK 447


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 216/455 (47%), Gaps = 34/455 (7%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           ILL +       +  + ++L+ +Y K    +   + F      G++ SV S + L   ++
Sbjct: 80  ILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLV 139

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G     +  + +M+   IEPT  ++N+++ G     KL  A    EDMK RG+S +V+
Sbjct: 140 KVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVI 199

Query: 198 TYNTMINGY---NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           TYNT+I+GY    +  KM +A+ +  EM+   I P  +++  +I G+   +    A+++F
Sbjct: 200 TYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVF 259

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM    VKPN VTY +L+ GLC+ GK+ E   +  +MV   + P +      LL   CK
Sbjct: 260 AEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKP-NIITHNALLNGFCK 318

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII--LRP 372
           +  +  A ++   M +  I      Y ILI+ +CK E  + A  L   ++ K +   +  
Sbjct: 319 NKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVST 378

Query: 373 QSTL--------DMEAS-----------------SYNPMIQHLCHNGQTGKAEIFFRQLM 407
            + L        D+EA+                 +YN +I  LC+ G+  KA     ++ 
Sbjct: 379 YNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMC 438

Query: 408 KKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           +KG L P  + +N +I G+ KEGN  +A  +   M + G   +   Y  LI+ + +K + 
Sbjct: 439 RKG-LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKL 497

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            DA   L+ M+E G  P    +  V E + E G V
Sbjct: 498 EDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 210/456 (46%), Gaps = 18/456 (3%)

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           ++++W +  +L+       F+     G+ L V + N +++G  +  ++ + E ++ EM  
Sbjct: 97  DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR 156

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA---GK 281
           + IEPT+IS+  +I G   V + + A  I ++MK   V  N +TY  L+ G C     GK
Sbjct: 157 RRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGK 216

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           M +   +L+EM    I P +   F  L+   CK  +++AA  V   M R  +      Y 
Sbjct: 217 MYKADAILKEMRADGICPNE-VTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYN 275

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            LI   C     + A  L D++V         S L     ++N ++   C N    +A  
Sbjct: 276 SLINGLCNNGKVNEATALRDQMV--------NSCLKPNIITHNALLNGFCKNKMVKQAGE 327

Query: 402 FFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F  + K+G+   V  +N LI  + K+ N + AF + +IM  +GV  D   Y CLI    
Sbjct: 328 LFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLC 387

Query: 461 RKGEPADAKTALDSMIEDGHSPASSL-FRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
           RKG+   A+  +  M +  H  A  + +  +++SL   G ++ A R++  M  KG+K + 
Sbjct: 388 RKGDLEAARNLVSEM-DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQ 446

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                +++     G++  AL     M + G + N   ++ L+    +K K   A  LL+ 
Sbjct: 447 LTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNE 506

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            L +  I +  +YE V + ++  G   +    L+K+
Sbjct: 507 MLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKV 542



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 164/304 (53%), Gaps = 1/304 (0%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           +G++GK+  A  IL +M   G+  +E  F +LI+ + K   V  ++K+F  M + GV+ +
Sbjct: 211 MGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V +Y++L   +   G+   A    ++M++  ++P   T+N +L GF  +  ++ A   F+
Sbjct: 271 VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFD 330

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           DM  +GI+ +V TYN +I+ Y + + M++A  L+  M  K + P V +Y  +I G     
Sbjct: 331 DMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG 390

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             + A  +  EM +  +K + +TY  L+  LC+ G+M +  ++L EM  + + P     +
Sbjct: 391 DLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQ-LTY 449

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             ++   CK G+L AA ++   M ++        Y +LI+ FCK +  + A  LL++++E
Sbjct: 450 NTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLE 509

Query: 366 KEII 369
           K +I
Sbjct: 510 KGLI 513



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 185/403 (45%), Gaps = 42/403 (10%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L +VGKLN A  I+ DM  +GV  +   +  LI+ Y K G + +  K   I+K+  
Sbjct: 169 VINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKE-- 226

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
                                         M ++GI P   T+N+++ GF     +  A+
Sbjct: 227 ------------------------------MRADGICPNEVTFNILIDGFCKDKNVSAAM 256

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F +M  +G+  +VVTYN++ING     K++EA  L  +M    ++P +I++  ++ G+
Sbjct: 257 KVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGF 316

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +    A  +FD+M    + PN  TY  L+   C    M +   + R M+ + + P D
Sbjct: 317 CKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCP-D 375

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            S +  L+   C+ G L AA +++  M    +  +   Y ILI++ C      +A++LLD
Sbjct: 376 VSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLD 435

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNL 420
           ++  K   L+P         +YN MI   C  G    A     Q+ K G L  VA +N L
Sbjct: 436 EMCRKG--LKPSQL------TYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVL 487

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           I+G  K+   + A  ++  M  +G+  +   Y  + E  + KG
Sbjct: 488 IKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 127/266 (47%), Gaps = 1/266 (0%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           KN   A++ F  + R G+   +  T+  +I  L   GK+N A  +   M    ++ +   
Sbjct: 250 KNVSAAMKVFAEMNRQGV-KPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIIT 308

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
              L+  + K  +V+++ ++FD M + G+  +V +Y+ L     +      A   +  ML
Sbjct: 309 HNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIML 368

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G+ P   TYN ++ G      LE A     +M ++ +  D++TYN +I+      +M 
Sbjct: 369 GKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMK 428

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A +L  EM  K ++P+ ++Y TMI GY        AL +  +M+      N  TY  L+
Sbjct: 429 KALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLI 488

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPP 299
            G C   K+ +   +L EM+E+ + P
Sbjct: 489 KGFCKKDKLEDANGLLNEMLEKGLIP 514



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 145/334 (43%), Gaps = 15/334 (4%)

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G +     V K MIR  I      + I+I   CK    ++A  +++ +  + +     
Sbjct: 140 KVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV----- 194

Query: 374 STLDMEASSYNPMIQHLCHNGQTGK---AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
                   +YN +I   C  G+ GK   A+   +++   G+  + V FN LI G  K+ N
Sbjct: 195 ---SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKN 251

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
             +A ++   M R+GV  +   Y  LI      G+  +A    D M+     P      +
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNA 311

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++    ++  V+ A  +   M ++G+  N+     +++A     ++E+A     +M+  G
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 371

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
             P+   ++ L++ L  KG   AA  L+     +    DL +Y  ++D+L   G+   A 
Sbjct: 372 VCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKAL 431

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +L ++  KG      + + +I G  +EGN + A
Sbjct: 432 RLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAA 465



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 5/178 (2%)

Query: 26  VYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            YN+L  A    +N E A   +R +   G+   D  T+  +I  L R G L  AR ++ +
Sbjct: 343 TYNILIDAYCKDENMEDAFALYRIMLGKGVC-PDVSTYNCLIAGLCRKGDLEAARNLVSE 401

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  K ++ D   + +LI+S   KG +++++++ D M + G++ S  +Y+ +     + G 
Sbjct: 402 MDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGN 461

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
              A    ++M   G      TYNV++ GF    KLE A     +M  +G+  + +TY
Sbjct: 462 LRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 63/113 (55%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L   G++  A  +L +M +KG++  +  +  +I+ Y K+G ++ ++ + 
Sbjct: 410 DLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLR 469

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
             M+++G   +V +Y+ L K   ++ +   A    N+ML +G+ P R TY ++
Sbjct: 470 SQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIV 522


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 260/557 (46%), Gaps = 39/557 (7%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
             L  AR     M   GV  +   + +L+ +   +G  +E++ +   M+  G + +  +Y
Sbjct: 136 ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTY 195

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     R G    A+R  + M   G++P   T+N ++ G   + ++E A + F++M  
Sbjct: 196 NTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVK 255

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G++ D V+YNT++ GY +     EA  +FAEM  K I P V+++T++I         + 
Sbjct: 256 EGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLER 315

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A+ +  EM+   ++ N +T+TAL+ G C  G + +    +REM +  I P     +  L+
Sbjct: 316 AVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPS-VVCYNALI 374

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G ++ A ++++ M    +  +   Y  ++  +CK      A +L  +++E  ++
Sbjct: 375 NGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVL 434

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
                    +A +Y+ +I+ LC   + G A + F+ ++  G+  D V + +LI GH KEG
Sbjct: 435 --------PDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEG 486

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           N + A  +   M + GV  D   Y  LI    +     +A+  L  +  +   PA+  + 
Sbjct: 487 NVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYD 546

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK-ILE----------ALLMRGHVEE 537
           ++M     +  +++   ++K    KG+    D V + IL+          ++L+ GH  E
Sbjct: 547 ALMRCC-RNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCRE 605

Query: 538 -----ALGRIDLMMQSGSVPNFDSLLSV---LSEKGKTIAA----VKLLDFCLGRD---- 581
                AL     M+Q G  PN  S +S+   L EKG  + A     +LL+ C   D    
Sbjct: 606 GNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEAS 665

Query: 582 -CIIDLASYEKVLDALL 597
             +IDL   E  +DA+L
Sbjct: 666 KALIDLNLKEGNVDAVL 682



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 251/535 (46%), Gaps = 35/535 (6%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           + FD M   GV  +V +Y+ L + +  RG    A      M   G +P   TYN ++  F
Sbjct: 143 RFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAF 202

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + +++ A R  + M+  G+  ++VT+N+++NG  +  +M++A K+F EM ++ + P  
Sbjct: 203 CRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDG 262

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           +SY T++ GY  V  + +AL +F EM    + P+ VT+T+L+  +C AG +     ++RE
Sbjct: 263 VSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVRE 322

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M ER +   +   F  L+   CK G L+ A   ++ M +  I      Y  LI  +C   
Sbjct: 323 MRERGL-QMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVG 381

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             D A +L+ ++  K +  +P      +  +Y+ ++   C NG T  A    +Q+++ GV
Sbjct: 382 RMDEARELVREMEAKGV--KP------DVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433

Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
           L D + +++LIR   +E     A  + K M   G+  D   Y  LI+ + ++G    A +
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALS 493

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM-KSMVEKGVKENLDLVAKILEAL 529
             D M++ G  P    +  ++  L +  R + A R++ K   E+ V  N+          
Sbjct: 494 LHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI---------- 543

Query: 530 LMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL---SEKGKTIAAVKLLDFCLGRDCIIDL 586
                      + D +M+        S+L++L     KG    A K+    L R+  +D 
Sbjct: 544 -----------KYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDG 592

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           + Y  ++      G  + A S   ++++ G   +  S+  LI GL ++G   +AD
Sbjct: 593 SVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEAD 647



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 134/568 (23%), Positives = 270/568 (47%), Gaps = 28/568 (4%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           A R + + L + +   V  + +N++   L G  + + AL   R +  AG  + +  T+  
Sbjct: 141 ARRFFDSMLSDGVAPNV--YTYNILVRALCGRGHRKEALSVLRDMRGAGC-DPNAVTYNT 197

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++    R G+++ A  ++  M + G++ +   F  ++    K G ++++ K+FD M + G
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +     SY+ L     + G    A   F +M  +GI P   T+  ++     +  LE A+
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAV 317

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M+ RG+ ++ +T+  +I+G+ +   +D+A     EM++  I+P+V+ Y  +I GY
Sbjct: 318 GLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGY 377

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             V R D+A  +  EM++  VKP+ VTY+ +L   C  G      ++ ++M+E  + P D
Sbjct: 378 CMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLP-D 436

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+ V C+   L  A  + K MI L +  +   Y  LI+  CK    +RA+ L D
Sbjct: 437 AITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHD 496

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE-IFFRQLMKKGVLDPVAFNNL 420
           ++V+  ++         +  +Y+ +I  L  + +T +A+ + F+   ++ V   + ++ L
Sbjct: 497 EMVKAGVL--------PDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDAL 548

Query: 421 IR---------------GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           +R               G   +G  + A ++ + +  R    D   Y  LI  + R+G  
Sbjct: 549 MRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNV 608

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A +    M++ G +P S+   S++  LFE G V  A +V++ ++      + +    +
Sbjct: 609 MKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKAL 668

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN 553
           ++  L  G+V+  L  +  M + G +P+
Sbjct: 669 IDLNLKEGNVDAVLDVLHGMARDGLLPS 696



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 195/419 (46%), Gaps = 20/419 (4%)

Query: 229 PTVISYTTMIKGYVAVERAD--DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           P+V++Y  ++   +A+  A    A R FD M S  V PN  TY  L+  LC  G   E  
Sbjct: 121 PSVLAYNAVL---LALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177

Query: 287 KVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            VLR+M      P  N+V +  L+   C++G ++ A  ++  M    +      +  ++ 
Sbjct: 178 SVLRDMRGAGCDP--NAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CKA   + A K+ D++V++         L  +  SYN ++   C  G + +A   F +
Sbjct: 236 GICKAGRMEDARKVFDEMVKE--------GLAPDGVSYNTLVGGYCKVGCSHEALSVFAE 287

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           + +KG++ D V F +LI    K GN + A  +V+ M  RG+  +   +  LI+ + +KG 
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             DA  A+  M +    P+   + +++      GR+  A  +++ M  KGVK ++   + 
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           IL A    G    A      M+++G +P+   + SL+ VL E+ +   A  L    +   
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              D  +Y  ++D     G    A S+  ++++ G + D  +   LI GL++   TK+A
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEA 526



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 88/174 (50%), Gaps = 5/174 (2%)

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G++P+   + +V+ +L  D  + +A R   SM+  GV  N+     ++ AL  RGH +EA
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           L  +  M  +G  PN   +++L++     G+   A +L+D         +L ++  V++ 
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           +  AG+  +A  +  +++++G   D  S + L+ G  + G + +A  + + M R
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTR 290



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 6/192 (3%)

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+   DSM+ DG +P    +  ++ +L   G  + A  V++ M   G   N      ++ 
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVA 200

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           A    G V+ A   +D+M + G  PN   F+S+++ + + G+   A K+ D  +      
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAP 260

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
           D  SY  ++      G +  A S+  ++  KG + D  +   LI  + + GN ++A  L 
Sbjct: 261 DGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLV 320

Query: 645 RMIRGEMSRGSQ 656
           R +R    RG Q
Sbjct: 321 REMR---ERGLQ 329


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/558 (23%), Positives = 252/558 (45%), Gaps = 14/558 (2%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI+S   K  +  ++   D++ Q G+   + +Y AL   + R G        +++MLSEG
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           ++P    YN ++        +  A    + +    +S D  TY +MI G+ R   +D A 
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           ++F +M ++  EP  ++Y+T+I G     R ++A  +  EM    + P A T T  +  L
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           CD G   +  ++  +M  +   P +   +  L+   C SG L  A  +   M R  +   
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEP-NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI    +      A  +L+        L  ++ L     +YN MI+  C  G  
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLN--------LMGRNGLFTNIVTYNEMIKGYCILGDP 611

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            KA +    ++++G   + V +N +I+G+   GN  SA  I+ +M   G   D  +Y  L
Sbjct: 612 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I  + +  +   A    + M++DG  P    + ++++   +D ++ TA+ +++ M   G 
Sbjct: 672 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
           + N+     ++  L  + +   A     +M++ G  PN   + +++  L + G T  A++
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           + +  + + C+ +L +Y  ++ AL   GK   A ++  ++   G + D  +  K+I    
Sbjct: 792 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851

Query: 633 QEGNTKQA-DILSRMIRG 649
             G  + A + L RMI+ 
Sbjct: 852 MSGKVEHAFNFLGRMIKA 869



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 152/612 (24%), Positives = 265/612 (43%), Gaps = 29/612 (4%)

Query: 37   EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
            + ALQ F  + + G    +  T+  +I  L   G++N A  ++ +M   G+         
Sbjct: 437  DSALQVFNQMAKEGC-EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495

Query: 97   LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
             I +    G  +++ ++F  MK  G E +V +Y AL   +   G   +A   F++M  +G
Sbjct: 496  PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555

Query: 157  IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
            + P   TYN ++     + +++ A      M   G+  ++VTYN MI GY       +A 
Sbjct: 556  VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615

Query: 217  KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
             +   M ++     +++Y T+IKGY        ALRI D M+    KP+  +YT L+ G 
Sbjct: 616  LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 675

Query: 277  CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
            C   KM     +  EMV+  + P + + +  L+   CK   L+ A  +L+ M R      
Sbjct: 676  CKISKMESAFGLFNEMVDDGLCPNEVT-YTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 734

Query: 337  AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
               Y +LI    K   +  A +L   ++E+ I   P         +Y  MI  LC NG T
Sbjct: 735  VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF--PNVV------TYTAMIDGLCKNGST 786

Query: 397  GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
              A   F +++++G L + + +++LIR   +EG  + A  +   + R G+  D   Y+ +
Sbjct: 787  SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 846

Query: 456  IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM-----ESLFEDGRVQTASRVMKSM 510
            IE+Y+  G+   A   L  MI+ G  P    +  ++     E L  D R+     V+ + 
Sbjct: 847  IEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNC 906

Query: 511  VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAA 570
                   + D V+      +M   + E    + + +Q       ++L+S LS  G+   A
Sbjct: 907  SFGYQTTDQDAVS------VMSAKLAELDPGLSVQVQ-------NALVSNLSTAGRWFEA 953

Query: 571  VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             +LL   + +    D  +Y  +L +LL       A  +   +  +G         +LI  
Sbjct: 954  NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 1013

Query: 631  LNQEGNTKQADI 642
            L Q    K+A I
Sbjct: 1014 LCQLHRRKEARI 1025



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/562 (24%), Positives = 251/562 (44%), Gaps = 16/562 (2%)

Query: 79  LLDM-PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
            LDM  + G++     +  L+    + G+    +  +  M   GV+ ++  Y+A+   + 
Sbjct: 337 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 396

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G    A+    K+    + P   TY  M+ G      L++A++ F  M   G   + V
Sbjct: 397 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 456

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TY+T+ING     +++EA  L  EM    I PT  + T  I     +   +DA R+F +M
Sbjct: 457 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 516

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           K+   +PN  TYTAL+ GLC +G +     +   M    + P +   +  L+ +  ++  
Sbjct: 517 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP-NTVTYNALINILVENRR 575

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  VL  M R  + T    Y  +I+ +C      +A+ +++ +++     R  S   
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ-----RGHSA-- 628

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFE 435
               +YN +I+  C +G T  A +    LM+ G   P   ++  LI G  K    +SAF 
Sbjct: 629 -NLVTYNTIIKGYCDSGNTTSA-LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 686

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   M   G+  +   Y  LI+ Y +  +   A + L+ M   G  P    +  ++  L 
Sbjct: 687 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 746

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           +      A  + K M+E+G+  N+     +++ L   G    AL   + M++ G +PN  
Sbjct: 747 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 806

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            + SL+  L ++GK   A  L         I D  +Y K+++A + +GK  +A++ L ++
Sbjct: 807 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 866

Query: 613 MEKGGVTDWKSSDKLIAGLNQE 634
           ++ G      +   LI GL  E
Sbjct: 867 IKAGCQPTLWTYGVLIKGLKNE 888



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 211/494 (42%), Gaps = 10/494 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + G +  A  I+  + +  +  D   +  +I  + +K  +  ++++F+ M + G
Sbjct: 391 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 450

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E +  +Y  L   +   GR   A     +M+  GI PT HT    +         E A 
Sbjct: 451 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 510

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R F DMK++G   +V TY  +I+G      +  A  LF  M    + P  ++Y  +I   
Sbjct: 511 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 570

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           V   R   A  + + M    +  N VTY  ++ G C  G   +   V+  M++R     +
Sbjct: 571 VENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG-HSAN 629

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++   C SG+  +A  +L  M       +   Y  LI  FCK    + A  L +
Sbjct: 630 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 689

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNL 420
           ++V+  +   P         +Y  +I   C + +   A      + + G    V  +N L
Sbjct: 690 EMVDDGLC--PNEV------TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 741

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G +K+ N   A E+ K+M   G+  +   Y  +I+   + G  + A    + MIE G 
Sbjct: 742 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 801

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    + S++ +L ++G+V+ A  +   +   G+  +     K++EA +M G VE A  
Sbjct: 802 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 861

Query: 541 RIDLMMQSGSVPNF 554
            +  M+++G  P  
Sbjct: 862 FLGRMIKAGCQPTL 875



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 221/496 (44%), Gaps = 25/496 (5%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N + N+L   +  ++A      + R GLF  +  T+ +MI+    +G    A  ++ +M
Sbjct: 563  YNALINILVENRRIKYAFVVLNLMGRNGLFT-NIVTYNEMIKGYCILGDPKKAMLVMNNM 621

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             ++G   +   +  +I+ Y   G    +++I D+M+  G +    SY  L     +  + 
Sbjct: 622  LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 681

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A   FN+M+ +G+ P   TY  ++ G+    KL+TA    E MK  G   +V TYN +
Sbjct: 682  ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 741

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I+G  +      AE+L   M E+ I P V++YT MI G         AL +F++M     
Sbjct: 742  IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 801

Query: 263  KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             PN +TY++L+  L   GK+ E + +  E+ ER+    D   ++K++     SG +  A 
Sbjct: 802  LPNLLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAF 860

Query: 323  DVLKAMIRLSIPTEAGHYGILIENFCKAE--MYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
            + L  MI+         YG+LI+   K E  + D+ +  L  +V          T D +A
Sbjct: 861  NFLGRMIKAGCQPTLWTYGVLIKGL-KNEYLLADQRLAALPDVVPNCSF--GYQTTDQDA 917

Query: 381  SSY-----------------NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
             S                  N ++ +L   G+  +A      ++ +G+  D  A+N+L+ 
Sbjct: 918  VSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 977

Query: 423  GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
               +  N D A  + K M  +G     + Y  LI +  +     +A+   ++M+    +P
Sbjct: 978  SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 1037

Query: 483  ASSLFRSVMESLFEDG 498
               +   +++ L  DG
Sbjct: 1038 DDVVQAVLIDGLLRDG 1053


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 243/543 (44%), Gaps = 42/543 (7%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
            D + +++V+   K  +  L   + +E  G+  H+  T   MI    R  KL+ A   + 
Sbjct: 73  IDFSRLFSVVARTKQYDLVLDLCKQMELKGI-AHNLYTLSIMINCCCRCRKLSLAFSAMG 131

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            + K G + D   F  LI     +G V E++++ D M ++G + ++ + +AL   +   G
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A    ++M+  G +P   TY  +L     S +   A+     M+ R I LD V Y+
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G  +   +D A  LF EM+ K  +  +I YTT+I+G+    R DD  ++  +M   
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+ V ++AL+      GK+ E +++ +EM++R I P D   +  L+   CK   L+ 
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP-DTVTYTSLIDGFCKENQLDK 370

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL----------------- 363
           A  +L  M+          + ILI  +CKA + D  ++L  K+                 
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430

Query: 364 ---------VEKEII-------LRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQL 406
                    V KE+        +RP      +  SY  ++  LC NG+  KA EIF +  
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRP------DIVSYKILLDGLCDNGEPEKALEIFEKIE 484

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
             K  LD   +N +I G       D A+++   +  +GV  D   Y  +I    +KG  +
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A      M EDGHSP    +  ++ +   +G    ++++++ +   G   +   V  ++
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604

Query: 527 EAL 529
           + L
Sbjct: 605 DML 607



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 197/436 (45%), Gaps = 10/436 (2%)

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           +LG E    ++  L   +   GR   A    ++M+  G +PT  T N ++ G  L+ K+ 
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+   + M   G   + VTY  ++    +  +   A +L  +M+E+ I+   + Y+ +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G       D+A  +F+EM+    K + + YT L+ G C AG+  +  K+LR+M++R I 
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D   F  L+    K G L  A ++ K MI+  I  +   Y  LI+ FCK    D+A  
Sbjct: 315 P-DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
           +LD +V K               ++N +I   C           FR++  +GV+ D V +
Sbjct: 374 MLDLMVSK--------GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI+G  + G  + A E+ + M  R V  D  +Y  L++     GEP  A    + + +
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
                   ++  ++  +    +V  A  +  S+  KGVK ++     ++  L  +G + E
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545

Query: 538 ALGRIDLMMQSGSVPN 553
           A      M + G  PN
Sbjct: 546 ADLLFRKMEEDGHSPN 561



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/522 (22%), Positives = 230/522 (44%), Gaps = 48/522 (9%)

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           +Y   L    + +K + A+  F++M        ++ ++ + +   R K+ D    L  +M
Sbjct: 39  SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM 98

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           + K I   + + + MI       +   A     ++     +P+ VT++ L+ GLC  G++
Sbjct: 99  ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV 158

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E  +++  MVE    P   ++   + G+ C +G ++ A  ++  M+          YG 
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGL-CLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           +++  CK+     A++LL K+ E++I         ++A  Y+ +I  LC +G    A   
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKI--------KLDAVKYSIIIDGLCKDGSLDNAFNL 269

Query: 403 FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           F ++  KG   D + +  LIRG    G  D   ++++ M +R +  D  A+  LI+ +++
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
           +G+  +A+     MI+ G SP +  + S+++   ++ ++  A+ ++  MV KG   N+  
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL 578
              ++        +++ L     M   G V +   +++L+    E GK   A +L    +
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI----ME-------------------- 614
            R    D+ SY+ +LD L   G+   A  I  KI    ME                    
Sbjct: 450 SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 509

Query: 615 -----------KGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
                      KG   D K+ + +I GL ++G+  +AD+L R
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 35/260 (13%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+   +  +L+ A  +L  M  KG   +   F +LI  Y K  ++ + +++F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   GV     +Y+ L +     G+  +AK  F +M+S  + P   +Y ++L G   +
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 175 LKLETAIRFFEDMKS-----------------------------------RGISLDVVTY 199
            + E A+  FE ++                                    +G+  DV TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N MI G  +   + EA+ LF +M+E    P   +Y  +I+ ++    A  + ++ +E+K 
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590

Query: 260 FDVKPNAVTYTALLPGLCDA 279
                +A T   ++  L D 
Sbjct: 591 CGFSVDASTVKMVVDMLSDG 610


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 150/625 (24%), Positives = 284/625 (45%), Gaps = 16/625 (2%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  VL    +   AL +F  +       H  ET   M+E L    K+     +   M KK
Sbjct: 92  VLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKK 151

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
            ++ D D +  + ++   +G +++   + + M++ G   +  SY+ L  L+++ G    A
Sbjct: 152 IIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEA 211

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
              + +M+SEG++P+  TY+ ++         E  +   ++M+  G+  +V T+   I  
Sbjct: 212 LEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRV 271

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             R  K+DEA ++F  M ++   P +++YT +I       + ++A  +F +MK+   KP+
Sbjct: 272 LGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPD 331

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
            V Y  LL    D G +   ++   +M  + Y+P  D   F  L+ V CK+   + A   
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP--DVVTFTILVDVLCKARDFDEAFAT 389

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              M +  I      Y  LI    +A   + A+KLLD +  + + ++P       A +Y 
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTM--ESVGVQPT------AYTYI 441

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
             I +   +G+TGKA   F ++  KG++ + VA N  +   ++ G    A  +   +   
Sbjct: 442 TFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  D+  Y  +++ Y + G+  +A   L  MI +G  P   +  S+++SL++ GRV  A
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
            ++   M +  +   +     +L  L   G V++A+   + M+     PN   F++LL  
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDC 621

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
             +  +   A+K+       DC  D+ +Y  V+  L+   K  +A+   F  ++K    D
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF-WFFHQLKKSMHPD 680

Query: 621 WKSSDKLIAGLNQEGNTKQADILSR 645
             +   L+ GL + G    A  ++R
Sbjct: 681 HVTICTLLPGLVKCGQIGDAISIAR 705



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 145/614 (23%), Positives = 270/614 (43%), Gaps = 47/614 (7%)

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            L  +G+L  A+ +   + + G+  D   + ++++ Y K G V E+V +   M + G E  
Sbjct: 482  LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
            V   ++L   + + GR   A + F++M    + PT  TYN +L G     +++ AI  FE
Sbjct: 542  VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
             M  +  S + +++NT+++ + +  +++ A K+F++M   + +P V++Y T+I G +   
Sbjct: 602  SMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKEN 661

Query: 246  RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
            + + A   F ++K   + P+ VT   LLPGL   G++ +   + R+ + +     + S +
Sbjct: 662  KVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFW 720

Query: 306  MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
              L+G       ++ A    + ++   I  E      L+   CK +    A ++ DK  +
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTK 780

Query: 366  KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
            K   L    TL    +SYN +I  L     T KA   F+ +   G   D   FN L+  H
Sbjct: 781  K---LGISPTL----ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 425  SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK---------------------- 462
             K G     FE+ K M  R    DA  Y  +I S  +                       
Sbjct: 834  GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 463  -------------GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
                         G   +A    + M + G  P  ++F  ++    + G  +TA ++ K 
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 510  MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTI- 568
            MV +G++ +L     +++ L + G V+EAL   + +  +G  P+F +   +++  GK+  
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 569  --AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
               A+ L +    R  + DL +Y  ++  L  AG    A  +  ++   G   D  + + 
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073

Query: 627  LIAGLNQEGNTKQA 640
            LI G +   N + A
Sbjct: 1074 LIRGYSLSENPEHA 1087



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 140/623 (22%), Positives = 267/623 (42%), Gaps = 15/623 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + ++ + L  A   E+A + F  ++  G    D+  ++ +++     G L+  +     M
Sbjct: 300 YTVLIDALCNAGQLENAKELFVKMKANG-HKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G   D   F +L++   K     E+   FD+M++ G+  ++ +Y+ L   +LR GR 
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +  + M S G++PT +TY   +  F  S +   A+  FE MK++GI  ++V  N  
Sbjct: 419 EDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           +       ++ EA+ +F  ++E  + P  ++Y  M+K Y  V + D+A+ +  EM     
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P+ +   +L+  L  AG++ E  ++   M +  + P     +  LL    K G +  A 
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPT-VVTYNTLLSGLGKEGRVQKAI 597

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++ ++MI          +  L++ FCK +  + A+K+  K+   +   +P      +  +
Sbjct: 598 ELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC--KP------DVLT 649

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVK-IMG 441
           YN +I  L    +   A  FF QL K    D V    L+ G  K G    A  I +  M 
Sbjct: 650 YNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMY 709

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           +     +   +  L+   L + E   A    + ++ +G     S    ++  L +  R  
Sbjct: 710 QVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKREL 769

Query: 502 TASRVMKSMVEK-GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
            A ++     +K G+   L     ++  LL   + E+A      M   G  P+   F+ L
Sbjct: 770 YAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNML 829

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           L+V  + GK     +L    + R C  D  +Y  V+ +L  +     A    + ++    
Sbjct: 830 LAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDF 889

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA 640
               ++   LI GL + G  ++A
Sbjct: 890 RPTPRTYGPLIDGLAKVGRLEEA 912



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 149/675 (22%), Positives = 265/675 (39%), Gaps = 69/675 (10%)

Query: 41   QFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
            +F+  +E  G +  D  T   ++++L +    + A      M K+G+  +   +  LI  
Sbjct: 353  EFWSQMEADG-YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411

Query: 101  YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
              + G +++++K+ D M+ +GV+ +  +Y        + G    A   F KM ++GI P 
Sbjct: 412  LLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471

Query: 161  RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
                N  L+      +L  A   F  ++  G++ D VTYN M+  Y++  ++DEA  L +
Sbjct: 472  IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531

Query: 221  EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
            EM     EP VI   ++I       R D+A ++FD MK   + P  VTY  LL GL   G
Sbjct: 532  EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG 591

Query: 281  KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            ++ +  ++   M+ +   P   S F  LL   CK+  +  A  +   M  +    +   Y
Sbjct: 592  RVQKAIELFESMIXKKCSPNTIS-FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTY 650

Query: 341  GILIENFCKAEMYDRAIKLLDKLVEKE-------IILRP--------------------Q 373
              +I    K    + A     +L +           L P                    Q
Sbjct: 651  NTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQ 710

Query: 374  STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-NNLIRGHSKEGNPDS 432
                +  S +  ++       +  KA IF  +L+  G+    +F   L+R   K      
Sbjct: 711  VRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELY 770

Query: 433  AFEIV-KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A++I  K   + G+     +Y CLI   L       A      M   G +P +  F  ++
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 492  ESLFEDGRVQTASRVMKSMVEKGVKEN------------------------LDLVAK--- 524
                + G++     + K M+ +  K +                         DLV+    
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 525  --------ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
                    +++ L   G +EEA+   + M   G  PN   F+ L++   + G T  A +L
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 574  LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                +      DL SY  ++D L  AG+   A     ++   G   D+ + +++I GL +
Sbjct: 951  FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010

Query: 634  EGNTKQADILSRMIR 648
                ++A  L   +R
Sbjct: 1011 SQRMEEALALYNEMR 1025



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 130/250 (52%), Gaps = 1/250 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N+V + L  + N + AL FF  +  +  F     T+  +I+ L +VG+L  A  +  +M
Sbjct: 861  YNIVISSLAKSNNLDKALDFFYDLVSSD-FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G + +  +F +LI  YGK G  + + ++F  M   G+   +KSY  L   +   GR 
Sbjct: 920  SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A  YFN++ S G++P    YN ++ G   S ++E A+  + +M++RGI  D+ TYN++
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            +        +++A++++ E++   +EP V +Y  +I+GY   E  + A  ++  M     
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099

Query: 263  KPNAVTYTAL 272
             PN  TY  L
Sbjct: 1100 NPNIGTYAQL 1109



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 158/345 (45%), Gaps = 11/345 (3%)

Query: 110  SVKIFD-IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
            + +IFD   K+LG+  ++ SY+ L   +L       A   F  M + G  P   T+N++L
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 169  WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
                 S K+      +++M SR    D +TYN +I+   +   +D+A   F ++   +  
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 229  PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
            PT  +Y  +I G   V R ++A+R+F+EM  +  KPN   +  L+ G    G      ++
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 289  LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             + MV   I P D   +  L+   C +G ++ A      +    +  +   Y  +I    
Sbjct: 951  FKRMVNEGIRP-DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLG 1009

Query: 349  KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
            K++  + A+ L +++  + I+  P      +  +YN ++ +L   G   +A+  + +L  
Sbjct: 1010 KSQRMEEALALYNEMRNRGIV--P------DLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061

Query: 409  KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
             G+  D   +N LIRG+S   NP+ A+ + K M   G   +   Y
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 119/514 (23%), Positives = 209/514 (40%), Gaps = 65/514 (12%)

Query: 25   LVYN-VLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
            L YN V++G        HA  FF  ++++   + D  T   ++  L + G++  A  I  
Sbjct: 648  LTYNTVIYGLIKENKVNHAFWFFHQLKKS--MHPDHVTICTLLPGLVKCGQIGDAISIAR 705

Query: 81   DMPKK------GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
            D   +         W++ M   L+E+   K I+     + +     G+ R       L +
Sbjct: 706  DFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLN-----GICREDSFLIPLVR 760

Query: 135  LILRRGRYMMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
            ++ +  R + A + F+K   + GI PT  +YN ++         E A   F+DMK+ G +
Sbjct: 761  VLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCA 820

Query: 194  LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
             D  T+N ++  + +  K+ E  +L+ EM  +  +P  I+Y  +I         D AL  
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880

Query: 254  FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
            F ++ S D +P   TY  L+ GL   G++ E  ++  EM +    P              
Sbjct: 881  FYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP-------------- 926

Query: 314  KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
                 N A                  + ILI  + K    + A +L  ++V + I  RP 
Sbjct: 927  -----NCAI-----------------FNILINGYGKIGDTETACQLFKRMVNEGI--RP- 961

Query: 374  STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPD 431
                 +  SY  ++  LC  G+  +A  +F +L   G LDP  +A+N +I G  K    +
Sbjct: 962  -----DLKSYTILVDCLCLAGRVDEALYYFNELKSTG-LDPDFIAYNRIINGLGKSQRME 1015

Query: 432  SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
             A  +   M  RG+  D   Y  L+ +    G    AK   + +   G  P    + +++
Sbjct: 1016 EALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075

Query: 492  ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
                     + A  V K+M+  G   N+   A++
Sbjct: 1076 RGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 90/181 (49%), Gaps = 1/181 (0%)

Query: 24   NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            N++ N      ++E A Q F+ +   G+   D +++  +++ L   G+++ A     ++ 
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGI-RPDLKSYTILVDCLCLAGRVDEALYYFNELK 990

Query: 84   KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
              G+  D   +  +I   GK   ++E++ +++ M+  G+   + +Y++L   +   G   
Sbjct: 991  STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVE 1050

Query: 144  MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
             AKR + ++   G+EP   TYN ++ G+ LS   E A   +++M   G + ++ TY  + 
Sbjct: 1051 QAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLP 1110

Query: 204  N 204
            N
Sbjct: 1111 N 1111


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 222/469 (47%), Gaps = 13/469 (2%)

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
           S+ +   M +LG E S+ +  +L        R   A    ++M+  G  P   T+  ++ 
Sbjct: 63  SLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 122

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G FL  K   A+   + M  RG   ++VTY  ++NG  +   +D A  L  +M+   IE 
Sbjct: 123 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 182

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            V+ + T+I         DDAL +F EM++  ++PN VTY++L+  LC  G+  +  ++L
Sbjct: 183 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 242

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            +M+E+ I P +   F  L+    K G    A  +   MI+ SI  +   Y  LI  FC 
Sbjct: 243 SDMIEKKINP-NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 301

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
            +  D+A ++ + +V K+    P      +  +YN +I+  C + +       FR++  +
Sbjct: 302 HDRLDKAKQMFEFMVSKDCF--P------DLDTYNTLIKGFCKSKRVEDGTELFREMSHR 353

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G++ D V +  LI+G   +G+ D+A ++ K M   GVP D   Y  L++     G+   A
Sbjct: 354 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 413

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
               D M +        ++ +++E + + G+V     +  S+  KGVK N+     ++  
Sbjct: 414 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 473

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           L  +  ++EA   +  M + G +P+   +++L+      G   A+ +L+
Sbjct: 474 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 522



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 210/441 (47%), Gaps = 13/441 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            L++ +    K SE      R V+R    N    T+  ++  L + G ++ A  +L  M 
Sbjct: 119 TLIHGLFLHNKASEAVALVDRMVQRGCQPN--LVTYGVVVNGLCKRGDIDLAFNLLNKME 176

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
              ++ D  +F  +I+S  K   V +++ +F  M+  G+  +V +Y +L   +   GR+ 
Sbjct: 177 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 236

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A +  + M+ + I P   T+N ++  F    K   A +  +DM  R I  D+ TYN++I
Sbjct: 237 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG+    ++D+A+++F  M  K+  P + +Y T+IKG+   +R +D   +F EM    + 
Sbjct: 297 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 356

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            + VTYT L+ GL   G     QKV ++MV   +PP D   +  LL   C +G L  A +
Sbjct: 357 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTYSILLDGLCNNGKLEKALE 415

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V   M +  I  +   Y  +IE  CKA   D    L   L  K +  +P         +Y
Sbjct: 416 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV--KPN------VVTY 467

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N MI  LC      +A    +++ + G L D   +N LIR H ++G+  ++ E+++ M  
Sbjct: 468 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527

Query: 443 RGVPRDADAYICLIESYLRKG 463
                DA + I L+ + L  G
Sbjct: 528 CRFVGDA-STIGLVANMLHDG 547



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 193/419 (46%), Gaps = 10/419 (2%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+  Y     + ++V + D M ++G      ++  L   +    +   A    ++M+  G
Sbjct: 85  LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 144

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
            +P   TY V++ G      ++ A      M++  I  DVV +NT+I+   +++ +D+A 
Sbjct: 145 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            LF EM+ K I P V++Y+++I    +  R  DA ++  +M    + PN VT+ AL+   
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
              GK VE +K+  +M++R I P D   +  L+   C    L+ A  + + M+      +
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSIDP-DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI+ FCK++  +   +L  ++  + ++         +  +Y  +IQ L H+G  
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV--------GDTVTYTTLIQGLFHDGDC 375

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A+  F+Q++  GV  D + ++ L+ G    G  + A E+   M +  +  D   Y  +
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           IE   + G+  D      S+   G  P    + +++  L     +Q A  ++K M E G
Sbjct: 436 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 207/444 (46%), Gaps = 12/444 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           +L+    HG + S+      + VE    +  D  T   +I  L    K + A  ++  M 
Sbjct: 84  SLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           ++G Q +   + V++    K+G +  +  + + M+   +E  V  ++ +   + +     
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F +M ++GI P   TY+ ++       +   A +   DM  + I+ ++VT+N +I
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           + + +  K  EAEKL  +M +++I+P + +Y ++I G+   +R D A ++F+ M S D  
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+  TY  L+ G C + ++ +  ++ REM  R +   D   +  L+      G  + A  
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL-VGDTVTYTTLIQGLFHDGDCDNAQK 380

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V K M+   +P +   Y IL++  C     ++A+++ D + + EI L        +   Y
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL--------DIYIY 432

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             MI+ +C  G+       F  L  KGV  + V +N +I G   +     A+ ++K M  
Sbjct: 433 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 492

Query: 443 RGVPRDADAYICLIESYLRKGEPA 466
            G   D+  Y  LI ++LR G+ A
Sbjct: 493 DGPLPDSGTYNTLIRAHLRDGDKA 516



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 211/461 (45%), Gaps = 13/461 (2%)

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           +++ A  ++  M + G + D   F  LI          E+V + D M Q G + ++ +Y 
Sbjct: 94  RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 153

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            +   + +RG   +A    NKM +  IE     +N ++        ++ A+  F++M+++
Sbjct: 154 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 213

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           GI  +VVTY+++I+    + +  +A +L ++M EK I P ++++  +I  +V   +  +A
Sbjct: 214 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
            ++ D+M    + P+  TY +L+ G C   ++ + +++   MV +   P D   +  L+ 
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP-DLDTYNTLIK 332

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             CKS  +    ++ + M    +  +   Y  LI+        D A K+  ++V   +  
Sbjct: 333 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV-- 390

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGN 429
            P   +     +Y+ ++  LC+NG+  KA   F  + K  + LD   +  +I G  K G 
Sbjct: 391 -PPDIM-----TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 444

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            D  +++   +  +GV  +   Y  +I     K    +A   L  M EDG  P S  + +
Sbjct: 445 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 504

Query: 490 VMESLFEDGRVQTAS---RVMKSMVEKGVKENLDLVAKILE 527
           ++ +   DG    ++   R M+S    G    + LVA +L 
Sbjct: 505 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 545



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 191/447 (42%), Gaps = 44/447 (9%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M   G    +VT ++++NGY   K++ +A  L  +M E    P  I++TT+I G     +
Sbjct: 70  MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 129

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
           A +A+ + D M     +PN VTY  ++ GLC  G +     +L +M    I   D  +F 
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA-DVVIFN 188

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            ++   CK  H++ A ++ K M    I      Y  LI   C    +  A +LL  ++EK
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGH 424
           +I   P         ++N +I      G+  +AE     ++K+ + DP    +N+LI G 
Sbjct: 249 KI--NPNLV------TFNALIDAFVKEGKFVEAEKLHDDMIKRSI-DPDIFTYNSLINGF 299

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
                 D A ++ + M  +    D D Y  LI+ + +     D       M   G    +
Sbjct: 300 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 359

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             + ++++ LF DG    A +V K MV  GV  ++   + +L+ L   G +E+AL   D 
Sbjct: 360 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 419

Query: 545 MMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
           M +S                      +KL           D+  Y  +++ +  AGK  +
Sbjct: 420 MQKS---------------------EIKL-----------DIYIYTTMIEGMCKAGKVDD 447

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGL 631
            + +   +  KG   +  + + +I+GL
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGL 474


>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
 gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 216/458 (47%), Gaps = 8/458 (1%)

Query: 26  VYNVLHGAKNSEHALQFF--RWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           V  ++   ++ + AL  F     E A  F HD  T   MI  L    +   A  +L  M 
Sbjct: 47  VQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAETLLDRMK 106

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           ++ +   ED+   +  +YG+     +S+++F  M+    + + KSY ++  +++   +  
Sbjct: 107 EEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLK 166

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFL-SLKLETAIRFFEDMKSRGISLDVVTYNTM 202
            A R++  M   GI PT  + NV++  F   S  ++ A+  F  M + G   D  TY T+
Sbjct: 167 SAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTL 226

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING  RF+ + EA++L  EM+ K   P+V++YT++I G   +   D+A+R+ ++MK  ++
Sbjct: 227 INGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNI 286

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +PN  TY++L+ G C  G     + +L  M+++ + P   S +  LL   C  G +N A 
Sbjct: 287 EPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMIS-YSTLLNGLCNEGKINEAL 345

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS-TLDMEAS 381
           ++   M       +AG YG ++   C    +  A   LD++V   I  +P   T  +   
Sbjct: 346 EIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGI--KPNRITWSLHVR 403

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIM 440
           ++N +I  LC    + +A   +  ++ +G+   V  FN+L++    + +      I+  M
Sbjct: 404 THNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEM 463

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
              G     + +  ++  +  + +  DA   L   + D
Sbjct: 464 VINGCIPQGEMWSTMVNCFCDERKACDAMKLLQLQLMD 501



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 189/440 (42%), Gaps = 35/440 (7%)

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           + G   D+ T++ MI+      +   AE L   MKE+ I+ T     ++ + Y  + +  
Sbjct: 72  ANGFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPL 131

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           D++R+F +M+ F  KP   +Y ++L  L +  ++    +  R+M +  IPP   S+ + L
Sbjct: 132 DSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNV-L 190

Query: 309 LGVQCK-SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           +   CK SG ++ A  + + M       ++  YG LI   C+             +VE +
Sbjct: 191 IKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCR----------FRSIVEAK 240

Query: 368 IILRPQSTLDMEAS--SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGH 424
            +L+   T     S  +Y  +I  LC      +A      +  K +   V  +++L+ G 
Sbjct: 241 ELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGF 300

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K G+   A +I+++M ++ +  +  +Y  L+     +G+  +A    D M   G  P +
Sbjct: 301 CKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDA 360

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH--VEEALGRI 542
            L+  ++  L +  R Q A+  +  MV  G+K N     +I  +L +R H  V   L  I
Sbjct: 361 GLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPN-----RITWSLHVRTHNRVIHGLCTI 415

Query: 543 D-------LMMQ------SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           +       L +       S +V  F+SLL     K       ++LD  +   CI     +
Sbjct: 416 NNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMW 475

Query: 590 EKVLDALLAAGKTLNAYSIL 609
             +++      K  +A  +L
Sbjct: 476 STMVNCFCDERKACDAMKLL 495


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 222/485 (45%), Gaps = 40/485 (8%)

Query: 26  VYNVLHGAKNSEHALQFF--RWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           V  ++   K+ E ++  F     E A  + HD+ +   M+  L    K   A  +++ M 
Sbjct: 19  VIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMK 78

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            +     ED+   +   YG+     +S+++F  MK    + S K+Y  +  +++   +  
Sbjct: 79  IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLN 138

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS-LKLETAIRFFEDMKSRGISLDVVTYNTM 202
           +A +++  M   G+ PT  + NV++     +   ++  ++ F +M  RG   D  TY T+
Sbjct: 139 LAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTL 198

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  RF ++DEA+KLF EM EK+  PTV++YT++I G    +  D+A+R  +EMKS  +
Sbjct: 199 ISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +PN  TY++L+ GLC  G+ ++  ++   M+ R   P +   +  L+   CK   +  A 
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP-NMVTYTTLITGLCKEQKIQEAV 317

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++L  M    +  +AG YG +I  FC    +  A   LD+++   I    + T ++   +
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN-RLTWNIHVKT 376

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
            N +++ LC N                                    P  AF +   M  
Sbjct: 377 SNEVVRGLCAN-----------------------------------YPSRAFTLYLSMRS 401

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           RG+  + +    L++   +KGE   A   +D ++ DG  P+   ++ ++    +   V  
Sbjct: 402 RGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGE 461

Query: 503 ASRVM 507
           AS  +
Sbjct: 462 ASDTL 466



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 176/392 (44%), Gaps = 31/392 (7%)

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVIS---YTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           N+FK    AE L   MK   IE  V+S     ++ +GY  V R  D+LR+F +MK FD  
Sbjct: 65  NKFKA---AEDLIVRMK---IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCD 118

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS-GHLNAAA 322
           P+   Y  +L  L +  ++    K  + M E  +PP   S+ + L+   C++ G ++A  
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV-LIKALCRNDGTVDAGL 177

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   M +     ++  YG LI   C+    D A KL  ++VEK+    P         +
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC--APT------VVT 229

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  +I  LC +    +A  +  ++  KG+   V  +++L+ G  K+G    A E+ ++M 
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            RG   +   Y  LI    ++ +  +A   LD M   G  P + L+  V+       + +
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349

Query: 502 TASRVMKSMVEKGVKEN---LDLVAKILEALLMRGHVEEALGR---IDLMMQSGS----V 551
            A+  +  M+  G+  N    ++  K    ++ RG       R   + L M+S      V
Sbjct: 350 EAANFLDEMILGGITPNRLTWNIHVKTSNEVV-RGLCANYPSRAFTLYLSMRSRGISVEV 408

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
              +SL+  L +KG+   AV+L+D  +   CI
Sbjct: 409 ETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI 440



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 183/396 (46%), Gaps = 23/396 (5%)

Query: 172 FLSLKLETAIRF--FEDMKSR-GISLDVVTYNTMIN---GYNRFKKMDEAEKLFAEMKEK 225
           ++ L+L +A +F   ED+  R  I   VV+ + +++   GY R  +  ++ ++F +MK+ 
Sbjct: 56  YMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
           + +P+  +Y T++   V   + + A + +  M+   + P   +   L+  LC     V+ 
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175

Query: 286 Q-KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             K+  EM +R   P D+  +  L+   C+ G ++ A  +   M+          Y  LI
Sbjct: 176 GLKIFLEMPKRGCDP-DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
              C ++  D A++ L+++  K I        +    +Y+ ++  LC +G++ +A   F 
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGI--------EPNVFTYSSLMDGLCKDGRSLQAMELFE 286

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            +M +G   + V +  LI G  KE     A E++  M  +G+  DA  Y  +I  +    
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAIS 346

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA---SRVMK---SMVEKGVKE 517
           +  +A   LD MI  G +P    +   +++  E  R   A   SR      SM  +G+  
Sbjct: 347 KFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISV 406

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            ++ +  +++ L  +G  ++A+  +D ++  G +P+
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPS 442



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 14/268 (5%)

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSK-EGNPDSAF 434
           D    +Y  ++  L    Q   A  F++ + + G+   VA  N LI+   + +G  D+  
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           +I   M +RG   D+  Y  LI    R G   +AK     M+E   +P    + S++  L
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
                V  A R ++ M  KG++ N+   + +++ L   G   +A+   ++MM  G  PN 
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             + +L++ L ++ K   AV+LLD    +    D   Y KV+    A  K   A + L +
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357

Query: 612 IMEKGGVT----DW----KSSDKLIAGL 631
            M  GG+T     W    K+S++++ GL
Sbjct: 358 -MILGGITPNRLTWNIHVKTSNEVVRGL 384



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 7/211 (3%)

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
           D  + +   Y R   P D+      M +    P+   + +V+  L E+ ++  A +  K+
Sbjct: 87  DILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN 146

Query: 510 MVEKGVKENLDLVAKILEALLMR-GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
           M E G+   +  +  +++AL    G V+  L     M + G  P+   + +L+S L   G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +   A KL    + +DC   + +Y  +++ L  +     A   L ++  KG   +  +  
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266

Query: 626 KLIAGLNQEGNTKQADILSRMIRGEMSRGSQ 656
            L+ GL ++G + QA  L  M+   M+RG +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMM---MARGCR 294


>gi|359490245|ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Vitis vinifera]
          Length = 1101

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 246/543 (45%), Gaps = 65/543 (11%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQ-LGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           F  LI+    KG V E+  +FD M++  G+  ++  Y  LF  + R+ R   A+ +  +M
Sbjct: 201 FNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEM 260

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            SEG    +  Y  ++ G+    K+ TA+R F  M   G   D  TYNT+I+G+ +    
Sbjct: 261 ESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLF 320

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D+   L  +M E  ++P V++Y  MI+ Y    + D AL +   M SF++ P+  +YT L
Sbjct: 321 DKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVL 380

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR-- 330
           +  L    ++VEV+++ ++M++  + P D+ +F  L+  Q K   L+ A  +L+A+ +  
Sbjct: 381 ITALYKENRLVEVEELYKKMLDIGVVP-DHVLFFTLMQKQPKGHELHLALKILQAIAKNG 439

Query: 331 -----LSIPTEAGH----------------------------YGILIENFCKAEMYDRAI 357
                  + T A H                            +GI I   C A   D A+
Sbjct: 440 CNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAAL 499

Query: 358 KLLDKLV-------------------EKEIILRPQSTLDM--------EASSYNPMIQHL 390
             +DK+V                   ++ ++   +S +D+        + ++Y  M+   
Sbjct: 500 LFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEH 559

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C++G    A     Q+ ++G+   VA ++++I   S+      A  + K+M   GV  DA
Sbjct: 560 CNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDA 619

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y+ +I  Y +     +A+   D MIE G  P+S  + +V+  L ++  +      +  
Sbjct: 620 IIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSD 679

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA 569
           M++ G   N  L   ++   L +G +E A   +DLM ++    +  + ++++S   + I 
Sbjct: 680 MLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNIT 739

Query: 570 AVK 572
            V+
Sbjct: 740 PVR 742



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 121/546 (22%), Positives = 230/546 (42%), Gaps = 28/546 (5%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +G++ D   + VL+      G  + +  ++ D +   G+    ++ +++       G+  
Sbjct: 86  RGLELDSCGYGVLLRKLVGSGEHRFAEAVYRDYVIARGIIPDSETLNSMVICYCNLGKLE 145

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A  +F+++      P +   N ML       ++  A  +F  +   GI + +  +N +I
Sbjct: 146 EAMAHFDRLFEVDSFPCKPACNAMLRELCARERVLEAFDYFVRINDVGILMGLWCFNRLI 205

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVIS-YTTMIKGYVAVERADDALRIFDEMKSFDV 262
           +G      +DEA  +F  M+E+   P  I  Y T+  G    ER ++A     EM+S   
Sbjct: 206 DGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGH 265

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             + + YT+L+ G C   KM    +V   M++    P D   +  L+    K G  +   
Sbjct: 266 FIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDP-DTYTYNTLIHGFVKLGLFDKGW 324

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS- 381
            +   M    +      Y I+I  +C+    D A+ LL  +          S+ ++  S 
Sbjct: 325 ILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSM----------SSFNLTPSV 374

Query: 382 -SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            SY  +I  L    +  + E  +++++  GV+ D V F  L++   K      A +I++ 
Sbjct: 375 HSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQA 434

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED----GHSPASSLFRSVMESLF 495
           + + G   D    +CL+ +        D +  ++ ++ +      + A   F   + +L 
Sbjct: 435 IAKNGCNLD----LCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALC 490

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
             G+   A   M  MV  G +  L     +++ L     VE+A   IDLM ++G VP+  
Sbjct: 491 AAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLA 550

Query: 556 SLLSVLSE---KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
           + L ++ E    G   +A  LLD    R     +A Y+ ++  L    + L A ++ FK+
Sbjct: 551 TYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENV-FKM 609

Query: 613 MEKGGV 618
           M + GV
Sbjct: 610 MLEAGV 615



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/469 (21%), Positives = 189/469 (40%), Gaps = 43/469 (9%)

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G+   A  + +KM+S G  P   TYN ++   F    +E A    + M+  GI  D+ TY
Sbjct: 493 GKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATY 552

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
             M++ +     +  A  L  +M E+ ++P+V  Y ++I      +R  +A  +F  M  
Sbjct: 553 LIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLE 612

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             V P+A+ Y  ++ G     + +E +++  +M+E    P  +S    + G+  K   ++
Sbjct: 613 AGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGL-VKENMID 671

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI----------- 368
                L  M++         Y  LI  F +    + A +L+D +   +I           
Sbjct: 672 KGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALV 731

Query: 369 ---------ILRPQSTLDMEASSYNPMIQHLCHN--------------GQTGKAEIFFRQ 405
                    + R    +   ++    ++ HL H               G   K + F   
Sbjct: 732 SGVSRNITPVRRRWYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALN 791

Query: 406 LMKK-----GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
           LM+K      + +   +N +I G  +      A+   ++M   GV  +   +  LI  + 
Sbjct: 792 LMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHT 851

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           R GE   A    + M  DG +P    + ++++ L + GR+  A  V  +M ++G+  N  
Sbjct: 852 RFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKS 911

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGK 566
              K+L+ L        A    + M+    VP   N + LL +L E+ +
Sbjct: 912 SYEKLLKCLCASHLGVHAFKIFEEMLSHDYVPCWYNCNWLLCILCEEHR 960



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 106/475 (22%), Positives = 194/475 (40%), Gaps = 19/475 (4%)

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED-MKSRGISLDVVTYNTMINGYNRFKKM 212
           + G+E     Y V+L     S +   A   + D + +RGI  D  T N+M+  Y    K+
Sbjct: 85  ARGLELDSCGYGVLLRKLVGSGEHRFAEAVYRDYVIARGIIPDSETLNSMVICYCNLGKL 144

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +EA   F  + E +  P   +   M++   A ER  +A   F  +    +      +  L
Sbjct: 145 EEAMAHFDRLFEVDSFPCKPACNAMLRELCARERVLEAFDYFVRINDVGILMGLWCFNRL 204

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GLCD G + E   +   M ER   P    ++  L    C+   +  A   +  M    
Sbjct: 205 IDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEG 264

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              +   Y  LI  +C+ +    A+++  +++        +   D +  +YN +I     
Sbjct: 265 HFIDKMMYTSLIHGYCRGKKMRTAMRVFLRML--------KMGCDPDTYTYNTLIHGFVK 316

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            G   K  I   Q+ + G L P  V ++ +IR + +EG  D A  ++  M    +     
Sbjct: 317 LGLFDKGWILHNQMSEWG-LQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVH 375

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           +Y  LI +  ++    + +     M++ G  P   LF ++M+   +   +  A ++++++
Sbjct: 376 SYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQAI 435

Query: 511 VEKGVKENLDLVAKILEALL-----MRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKG 565
            + G   NLDL      A       +   +E  LG I     + +   F   +S L   G
Sbjct: 436 AKNGC--NLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAG 493

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           KT AA+  +D  +   C   L++Y  ++  L       +A S++  + E G V D
Sbjct: 494 KTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPD 548



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P  + YN ++ GF  +  ++ A   FE M++ G+  + VT+  +ING+ RF ++D A  L
Sbjct: 803 PNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGL 862

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F +M    + P  I+Y  +IKG     R  DAL +   M    + PN  +Y  LL  LC 
Sbjct: 863 FNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLCA 922

Query: 279 AGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           +   V   K+  EM+   Y+P   N  +  LL + C+    + A  V   M++
Sbjct: 923 SHLGVHAFKIFEEMLSHDYVPCWYNCNW--LLCILCEEHRWHEAHIVFDVMLK 973



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/462 (20%), Positives = 190/462 (41%), Gaps = 38/462 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+L M+      G L  A  +L  M ++G++    +++ +I    ++  + E+  +F
Sbjct: 548 DLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVF 607

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            +M + GV+     Y  +     +  R + A++ F+KM+  G +P+ H+Y  ++ G    
Sbjct: 608 KMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKE 667

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             ++    +  DM   G   + V Y ++IN + R  +++ A +L   M    IE  +I+ 
Sbjct: 668 NMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITC 727

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G   V R    +R     + + VK  +                  V+++L  ++ 
Sbjct: 728 IALVSG---VSRNITPVR----RRWYHVKSGS----------------ARVREILLHLLH 764

Query: 295 R--YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           +   IP ++N  F +    + K   LN    +  +     +P    + GI I  FC+A M
Sbjct: 765 QSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSF---MPNLYLYNGI-ISGFCRANM 820

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
              A    + L++ E +   Q T  +  + +          G+   A   F ++   G+ 
Sbjct: 821 IQDAYNHFE-LMQTEGVCPNQVTFTILINGHTRF-------GEIDHAIGLFNKMNADGLA 872

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D + +N LI+G  K G    A  +   M +RG+  +  +Y  L++          A   
Sbjct: 873 PDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLCASHLGVHAFKI 932

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            + M+   + P       ++  L E+ R   A  V   M+++
Sbjct: 933 FEEMLSHDYVPCWYNCNWLLCILCEEHRWHEAHIVFDVMLKQ 974


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 238/544 (43%), Gaps = 46/544 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+ +L   G L+    +L +M  +G     +    LI +YG+     ++  +F+  +   
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +V ++  L  +++  G +  A+  + K++ +G +  R  YNV++  F  S +L++A+
Sbjct: 61  CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F +MK +G   D  TY  ++N   +  ++ EA   F  M E+ + P + +Y  ++  +
Sbjct: 121 EMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF 180

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             V + D AL +F EMK    +P+ VTY  LL  LC AG++   +K+  +M      P D
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP-D 239

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +  +  L+    KSG +  A  V + M+   +  +  +Y  L+    KA   DR  KL+ 
Sbjct: 240 SYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMK 299

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
           ++  K                ++P                           D  +FN ++
Sbjct: 300 EMSRK---------------GFHP---------------------------DAFSFNTIM 317

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
               K   PD+A E+   M   G   D  +Y  LI+SY R G+ A A+  L+ M+E G  
Sbjct: 318 DALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFI 377

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P +  + S++  L  DG+V  A  V++ M   G + ++    ++++ L  RG  + A   
Sbjct: 378 PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARL 437

Query: 542 IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
              M   G  P+   +   +  L+   +   A+ L        C +D A Y  ++ A   
Sbjct: 438 FQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHR 497

Query: 599 AGKT 602
           AG T
Sbjct: 498 AGDT 501



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 190/398 (47%), Gaps = 10/398 (2%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K+I+IL   G+   A  +   + +KG Q D   + VLI  +G+ G +  ++++F  MK  
Sbjct: 70  KLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIK 129

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G E    +Y  L   + + GR   A+ +F+ ML  G+ P   TYN+++  F    +L+ A
Sbjct: 130 GSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMA 189

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +  F +MK RG    VVTYN +++      ++  A KLF +M      P   +Y+T++ G
Sbjct: 190 LGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                R ++A ++F EM    V  + V Y +LL  L  AG M  V K+++EM  +   P 
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHP- 308

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  ++    K+   +AA +V   M+      +   Y ILI+++ +     +A ++L
Sbjct: 309 DAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQML 368

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           +++VE   I         E  +YN +I  L  +GQ  +A     ++   G   D V +N 
Sbjct: 369 EEMVEAGFI--------PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNR 420

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           L+    K G    A  + + M  +GV  D  +Y   I+
Sbjct: 421 LMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRID 458



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 189/411 (45%), Gaps = 10/411 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           DR  +  +I   GR G+L+ A  +  +M  KG + DE  +  L+ + GK G VQE+   F
Sbjct: 99  DRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFF 158

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M + G+  ++ +Y+ L     + G+  MA   F +M   G +P+  TYN++L     +
Sbjct: 159 DAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSA 218

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            ++  A + F  M   G S D  TY+T++NG  +  +++EA K+F EM ++ +   +++Y
Sbjct: 219 GRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNY 278

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            +++         D   ++  EM      P+A ++  ++  L  A K    ++V   MVE
Sbjct: 279 NSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE 338

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P D   +  L+    + G    A  +L+ M+      E   Y  LI         D
Sbjct: 339 SGCKP-DLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVD 397

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            A  +L+++  +    RP      +  +YN ++  L   G+  +A   F+Q+  KGV  D
Sbjct: 398 EAFAVLEEM--ETAGCRP------DVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPD 449

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
            +++   I G + +   D A  + K M   G P D   Y  LI +  R G+
Sbjct: 450 TLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGD 500



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 195/414 (47%), Gaps = 13/414 (3%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           +F +N++      +   + A++ FR ++  G    D  T+  ++  LG+ G++  AR   
Sbjct: 100 RFAYNVLIRYFGRSGQLDSAMEMFREMKIKGS-EPDEYTYGFLVNALGKAGRVQEARSFF 158

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             M ++G+  +   + +L++++ K G +  ++ +F  MK+ G + SV +Y+ L   +   
Sbjct: 159 DAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSA 218

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           GR   A++ F+KM  +G  P  +TY+ ++ G   S ++E A + F +M  RG+++D+V Y
Sbjct: 219 GRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNY 278

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N+++    +   MD   KL  EM  K   P   S+ T++       + D A  +F  M  
Sbjct: 279 NSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE 338

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHL 318
              KP+ ++Y  L+      G   + +++L EMVE  +IP  +   +  L+      G +
Sbjct: 339 SGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIP--ETKTYNSLIHWLATDGQV 396

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A  VL+ M       +   Y  L++   K     RA +L  ++ +K +        + 
Sbjct: 397 DEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGV--------EP 448

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
           +  SY   I  L  + +  +A + F+ +   G  +D   +  LIR   + G+ +
Sbjct: 449 DTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 133/271 (49%), Gaps = 5/271 (1%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           ++  +I  L ++G+  +AE+ +++L++KG  LD  A+N LIR   + G  DSA E+ + M
Sbjct: 67  AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G   D   Y  L+ +  + G   +A++  D+M+E G +P    +  +M++  + G++
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A  +   M  +G + ++     +L+AL   G V  A      M   G  P+   + +L
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           ++ L + G+   A K+    + R   +DL +Y  +L  L  AG     + ++ ++  KG 
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGF 306

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
             D  S + ++  L +      A ++ +RM+
Sbjct: 307 HPDAFSFNTIMDALGKANKPDAAREVFARMV 337



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/432 (21%), Positives = 170/432 (39%), Gaps = 81/432 (18%)

Query: 212 MDEAEKLFAEM--KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
           +D  E L  EM  + + + P  +    +I  Y    ++ DA  +F++ +SF   P    +
Sbjct: 11  LDPLETLLKEMVAEGRPLRPNTL--VKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           T                                    KL+ +   SG    A  V K ++
Sbjct: 69  T------------------------------------KLIDILVNSGEFERAELVYKKLV 92

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           +     +   Y +LI  F ++   D A+++      +E+ ++       +  +Y  ++  
Sbjct: 93  QKGCQLDRFAYNVLIRYFGRSGQLDSAMEMF-----REMKIKGSEP---DEYTYGFLVNA 144

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           L   G+  +A  FF  ++++G+   +  +N L+    K G  D A  +   M RRG    
Sbjct: 145 LGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPS 204

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  L+++    G    A+     M  DG SP S  + +++  L + GRV+ A +V +
Sbjct: 205 VVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFR 264

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTI 568
            MV++GV   +DLV                              N++SLL+ L++ G   
Sbjct: 265 EMVDRGVA--VDLV------------------------------NYNSLLATLAKAGNMD 292

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
              KL+     +    D  S+  ++DAL  A K   A  +  +++E G   D  S + LI
Sbjct: 293 RVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILI 352

Query: 629 AGLNQEGNTKQA 640
               + G+  QA
Sbjct: 353 DSYARFGDAAQA 364



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 2/207 (0%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           +R W    +   +   P  F  N + + L  A   + A + F  +  +G    D  ++  
Sbjct: 292 DRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGC-KPDLISYNI 350

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   R G    AR +L +M + G   +   +  LI      G V E+  + + M+  G
Sbjct: 351 LIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAG 410

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               V +Y+ L  ++ +RG    A R F +M  +G+EP   +Y V + G     +L+ A+
Sbjct: 411 CRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEAL 470

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNR 208
             F+DMK+ G  +D   Y  +I   +R
Sbjct: 471 VLFKDMKAVGCPVDKAMYRILIRAAHR 497


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/529 (23%), Positives = 262/529 (49%), Gaps = 30/529 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +  + + A  +  +M  +G++ +E  + +LI +  K+G++++++ +FD M+  G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +V  Y++L     ++G    A+   + M+ EG+ PT  +Y+ ++ G   +  L +A+
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M  RGI+ +  T+  +ING+ + KKMDEA +LF +M + N+ P  +++  MI+GY
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             V     A +++D+M    +KP+  TY +L+ GLC    + +  + + ++   Y    +
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI---------ENFCKA-- 350
            S+   L G+  + G       +   M    +  +   + I++         E  C    
Sbjct: 584 FSLTALLYGLF-REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 642

Query: 351 EMYDRAIK--------LLDKLVEKEIILRPQSTLD-MEASSYNP-------MIQHLCHNG 394
           EM ++ +K        ++D L ++E +++  +  D M    Y+P       +I +LC +G
Sbjct: 643 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSG 702

Query: 395 QTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
             G AE+  ++++   VL +   +N  +   + EG+ + A ++   M  +G      ++ 
Sbjct: 703 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFN 761

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI+   + G+  +A   +  + E G SP    + +++  L + G +  A  +   M+ K
Sbjct: 762 ILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
           G+K ++      +    + G  ++ALG    M++SG  PN+D+  ++LS
Sbjct: 822 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 145/602 (24%), Positives = 270/602 (44%), Gaps = 21/602 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++    R+ +L  A  I  DM + G    E     +I+   KK +V+E+  + 
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 326

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             +  LG+  +V +Y+AL   + +  R+  A R F +M   G+EP   TY +++      
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A+  F+ M+ +GI + V  YN++INGY +   +D A  L + M ++ + PT  SY
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I G         A+ +  EM    +  N  T+TAL+ G C   KM E  ++  +M++
Sbjct: 447 SPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P + + F  ++   C  G++  A  +   M+ + +  +   Y  LI   C      
Sbjct: 507 SNVIPNEVT-FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
           +A + +  L     +L           S   ++  L   G+  +    + ++  +GV LD
Sbjct: 566 KANEFVADLENSYAVL--------NNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLD 617

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V+F  ++    K+ + + +  + + M  +GV  D   Y C+I++  ++     A    D
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+ DG+SP +     ++ +L + G + +A  + K M+   V  N       L+     G
Sbjct: 678 QMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737

Query: 534 HVEEALGRIDLMMQS--GSVPNFDSLLSVLSEKGKTIAAV----KLLDFCLGRDCIIDLA 587
            +E+A      M+Q    S+ +F+ L+  L + GK   A+    K+ +     DCI    
Sbjct: 738 DMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCI---- 793

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           SY  ++  L   G    A+ +  +++ KG   D  + +  I   N  G + +A  I + M
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853

Query: 647 IR 648
           IR
Sbjct: 854 IR 855



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 137/594 (23%), Positives = 261/594 (43%), Gaps = 18/594 (3%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L ++ +   AR +   M + GV  DE ++   I +Y +   +  +  +   M+  GV+ S
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 232

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
              Y+ L   + +  R   A    N M++ G+     TY  +++GF    +LE A+R   
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITH 292

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           DM   G        + MI+   + + ++EA  L  ++ +  + P V +Y  +I      E
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNE 352

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           R DDA R+F EM    ++PN VTY  L+  LC  G + +   +  +M ++ I       +
Sbjct: 353 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP-Y 411

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             L+   CK G L+ A  +L  M++  +   A  Y  LI   C+      A++L  ++ E
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAE 471

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
           + I             ++  +I   C + +  +A   F +++   V+ + V FN +I G+
Sbjct: 472 RGIA--------WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
              GN   AF++   M   G+  D   Y  LI         + A   +  + E+ ++  +
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL-ENSYAVLN 582

Query: 485 SL-FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
           +    +++  LF +GR      +   M  +GVK +L     I+ A L +   E++     
Sbjct: 583 NFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 642

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M + G  P+   +  ++  LS++   I A+   D  +      +  ++  +++ L  +G
Sbjct: 643 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSG 702

Query: 601 KTLNAYSILFKIMEKGGVTDWK-SSDKLIAGLNQEGNTKQA-DILSRMIRGEMS 652
             L +  +L K M  G V   K + +  +     EG+ ++A D+ S M++G ++
Sbjct: 703 -YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 755



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 212/511 (41%), Gaps = 38/511 (7%)

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS GI   ++T + +L+      +   A   F+ M   G+ LD   Y   I  Y   + +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D A  L   M+ + ++ + + Y  ++ G     R  +A+ + + M +  V  + VTY  L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 273 LPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFM-----------KLLGVQCKSGHLNA 320
           + G C   ++    ++  +M+   ++P + N  FM           +   + CK G L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
             +V               Y  LI+  CK E +D A +L  ++  +   L P        
Sbjct: 335 VPNVFA-------------YNALIDKLCKNERFDDADRLFKEMAGRG--LEPNEV----- 374

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y  +I  LC  G    A   F ++  KG+   V  +N+LI G+ K+G+ D A  ++  
Sbjct: 375 -TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M + G+   A +Y  LI    R G+ + A      M E G +  +  F +++    +D +
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKK 493

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
           +  A+R+   M++  V  N      ++E   + G++ +A    D M++ G  P+  +  S
Sbjct: 494 MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 553

Query: 560 VLSEKGKTIAAVKLLDFCLGRD---CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           ++S    T    K  +F    +    +++  S   +L  L   G+    Y +  ++  +G
Sbjct: 554 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRG 613

Query: 617 GVTDWKSSDKLI-AGLNQEGNTKQADILSRM 646
              D  S   ++ A L Q    K   +   M
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 8/240 (3%)

Query: 77  CILL-DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
           C+L  +M ++GV+ D+  +  +I++  K+  + +++  +D M   G   +  ++  L   
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINN 697

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS---RGI 192
           + + G    A+    +ML+  + P + TYN  L  F     +E A    +D+ S   +G 
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA----KDLHSAMLQGH 753

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
              +V++N +I G  +  K+ EA  L  ++ E    P  ISY+T+I     +   + A  
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFE 813

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +++EM    +KP+ V Y   +      G+  +   +   M+   + P  ++    L G+ 
Sbjct: 814 LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 150/660 (22%), Positives = 278/660 (42%), Gaps = 75/660 (11%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE-VLIES---YGKKGIV 107
           F H   T+  M++ LG  GK N    +L +M       D  + E V +E+   YG+KG +
Sbjct: 115 FKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRS---NLDNTLLEGVYVEAMRFYGRKGKI 171

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
           QE+V  F+ M     + SV SY+A+  +++  G +  A + + +M  + +E   +TY + 
Sbjct: 172 QEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIR 231

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           +  F  + +   A+R   +M   G   + V Y T++ G+  F   D A +LF EM E  +
Sbjct: 232 IKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCL 291

Query: 228 EPTVISYTTMI-----KGYV---------AVERA---------------------DDALR 252
            P V ++  ++     KG+V          ++R                      D A+R
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +   +    ++P+ VTY  ++ GLC   ++VE ++ L +MV     P D + +  ++   
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFT-YNSIIDGY 410

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI--------------- 357
           CK G +  A  +LK  +      +   Y  L+  FC+    D+A+               
Sbjct: 411 CKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSI 470

Query: 358 ----KLLDKLVEKEIILRPQSTLDMEAS--------SYNPMIQHLCHNGQTGKAEIFFRQ 405
                L+  L ++ +IL     ++  A         +YN +I  LC  G    A      
Sbjct: 471 IVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGD 530

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
            + KG + D   +N L+ G+ ++   DSA E+V  M  +G+  D   Y  L+    +  +
Sbjct: 531 AITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAK 590

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +      +M E G +P    + +++ESL    +V  A  ++  M  KG+  ++     
Sbjct: 591 SEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGT 650

Query: 525 ILEALLMRGHVEEALGRIDLMMQ----SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGR 580
           ++      G ++ A G    M +    S +   ++ ++S  SE+     A++L       
Sbjct: 651 LITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKN 710

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            C  D  +Y  ++D     G     Y  L + +EKG +    +  +++  L  E   ++A
Sbjct: 711 GCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEA 770



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 238/504 (47%), Gaps = 17/504 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T  K++  L + G +  +  +   + K+GV  +   F + I+   K+G +  +V++ 
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             + + G+   V +Y+ +   + R+ R + A+   +KM++ G EP   TYN ++ G+   
Sbjct: 354 GCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKK 413

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A R  +D   +G   D  TY +++NG+ +    D+A  +F +   K + P++I Y
Sbjct: 414 GMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVY 473

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+IKG         AL++ +EM     KP+  TY  ++ GLC  G + +   ++ + + 
Sbjct: 474 NTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 533

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           +   P D   +  L+   C+   L++A +++  M    +  +   Y  L+   CK    +
Sbjct: 534 KGCIP-DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
             +++   + EK     P         +YN +I+ LC++ +  +A     ++  KG+  D
Sbjct: 593 EVMEIFKAMTEKGCA--PNII------TYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRR-GVPRDADAYICLIESYLRKGEPADAKTAL 472
            V+F  LI G  K G+ D A+ + + M ++  V      Y  +I ++    E  + K AL
Sbjct: 645 VVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAF---SEQLNMKMAL 701

Query: 473 ---DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
                M ++G  P +  +R +++   + G V    + +   +EKG   +L    ++L  L
Sbjct: 702 RLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL 761

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN 553
            +   V+EA+G I LM+Q   VP+
Sbjct: 762 CVEHKVQEAVGIIHLMVQKDIVPD 785



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/472 (22%), Positives = 224/472 (47%), Gaps = 21/472 (4%)

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS--YTTMIKGYVAVERA 247
           +G    + TY +M+       K +E E L +EM+  N++ T++   Y   ++ Y    + 
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRS-NLDNTLLEGVYVEAMRFYGRKGKI 171

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +A+  F+ M  F+  P+  +Y A++  L + G   +  KV   M ++ +   ++ V+  
Sbjct: 172 QEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKV---ESDVYTY 228

Query: 308 LLGVQ--CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
            + ++  C++G   AA  +L+ M  L   + A  Y  ++  F +    DRA +L D+++E
Sbjct: 229 TIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
                     L  + +++N ++  LC  G   ++E  F +++K+GV  +   FN  I+G 
Sbjct: 289 --------CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            KEG+ D A  ++  + R G+  D   Y  +I    RK    +A+  L  M+  G  P  
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPND 400

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             + S+++   + G V  A+R++K  V KG K +      ++      G  ++A+     
Sbjct: 401 FTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
            +  G  P+   +++L+  L ++G  + A++L++    + C  D+ +Y  +++ L   G 
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGC 520

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMS 652
             +A  ++   + KG + D  + + L+ G  ++     A ++++RM    M+
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 184/402 (45%), Gaps = 11/402 (2%)

Query: 50  GLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQE 109
           G F  +  T+  +I+   + G +  A  IL D   KG + DE  +  L+  + + G   +
Sbjct: 394 GGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQ 453

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
           ++ +F      G+  S+  Y+ L K + ++G  + A +  N+M  +G +P   TYN+++ 
Sbjct: 454 AMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIIN 513

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G      L  A     D  ++G   D+ TYNT+++GY R  K+D A +L   M  + + P
Sbjct: 514 GLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTP 573

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            VI+Y T++ G     ++++ + IF  M      PN +TY  ++  LC++ K+ E   +L
Sbjct: 574 DVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLL 633

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR-LSIPTEAGHYGILIENFC 348
            EM  + + P D   F  L+   CK G L+ A  + + M +   +      Y I+I  F 
Sbjct: 634 GEMKSKGLTP-DVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFS 692

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +      A++L  ++         ++  D +  +Y  +I   C  G   +   F  + ++
Sbjct: 693 EQLNMKMALRLFSEM--------KKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIE 744

Query: 409 KGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           KG +  +  F  ++     E     A  I+ +M ++ +  D 
Sbjct: 745 KGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 143/568 (25%), Positives = 254/568 (44%), Gaps = 19/568 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F +LI+   K G V++++ +FD M Q G+     +Y  +   + R  R   A R F+KM 
Sbjct: 199 FSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMK 258

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+ P   T N +L GF +  +++ A       +  G  LDV  Y+ +I G  R K+ +
Sbjct: 259 DSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYE 318

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           + + L+ +M E N++P V  YT M+KG     +  DAL + +EM    V P+ V Y  L+
Sbjct: 319 DVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLI 378

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G CD G + E + +  E + R+    +   +  L+   C++G    A ++   M +L  
Sbjct: 379 KGFCDMGLLSEARSLQLE-ISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGC 437

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKL---VEKEIILR----PQSTLDMEASSYNPM 386
              A  +  LI+  CK    ++A  L  K+       + LR    P   LD  ++S   M
Sbjct: 438 YPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLD--SASLQKM 495

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           ++ LC +G   KA     QL   G    +  +N L+ G  K GN + A+++ + M  +G+
Sbjct: 496 VEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGL 555

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  LI   LR     DA    D M ++G +P ++++R++M  +     +  A  
Sbjct: 556 SPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFS 615

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLS 562
           +    + + ++   D   K +E    +  VE+A   L  +D  +    +  +   L  L 
Sbjct: 616 LWLKYL-RNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLC 674

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           +  +   A+K+         +I      K++  LL  G    A  +    +EKG +   +
Sbjct: 675 QTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRRR 734

Query: 623 SSDKLIAGL----NQEGNTKQADILSRM 646
            +++++  L     + G  +   +L RM
Sbjct: 735 VANRILTKLVRRKGEMGKDRAIYLLCRM 762



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 3/205 (1%)

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+    DA+  LI+ YL+ G    A     SM +   +P    +  +++ L +   +  A
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             V   M++     N+   + +++ L   G+V++AL   D M Q G +P+   +  ++S 
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L    +   A +L D         D  +   +L+      +   A+S+L    + G V D
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300

Query: 621 WKSSDKLIAGLNQEGNTKQADILSR 645
            +    LI GL +    +   +L R
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYR 325



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 104/276 (37%), Gaps = 42/276 (15%)

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           AF  LI+ + K G  D A E    M       D   Y  +++  ++K     A T    M
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           ++    P  + F  +++ L + G V+ A  +   M ++G+  +      ++  L     V
Sbjct: 188 MKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV 247

Query: 536 EEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDF---------CLGRDCI 583
           ++A    D M  SG  P+F   ++LL+      +   A  LL             G  C+
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307

Query: 584 I--------------------------DLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           I                          D+  Y  ++  L  AGK  +A  +L ++ E G 
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
           V D    + LI G    G   +A    R ++ E+SR
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEA----RSLQLEISR 399


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 197/431 (45%), Gaps = 23/431 (5%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++  +I+   K G   +S  +F  M+  G+  ++ +Y+ +       GR+  A+R   +M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L   I P   TYN ++  F    K   A   +++M  RGI  + +TYN+MI+G+ +  ++
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D AE +F  M  K   P V ++TT+I GY   +R DD + +  EM    +  N VTY  L
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G +     + ++M+   + P D      LL   C +G L  A ++ KAM +  
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCP-DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 333 IPTEAGH-----------YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
           +  +A H           Y ILI        +  A +L +++  + I+  P +       
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV--PDTI------ 545

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKI 439
           +Y+ MI  LC   +  +A   F  +  K    P  V FN LI G+ K G  D   E+   
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGSKS-FSPNVVTFNTLINGYCKAGRVDDGLELFCE 604

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           MGRRG+  DA  YI LI  + + G    A      MI  G  P +   R+++   +    
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664

Query: 500 VQTASRVMKSM 510
           ++ A  +++ +
Sbjct: 665 LERAVAMLEDL 675



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 238/539 (44%), Gaps = 41/539 (7%)

Query: 28  NVLHGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
            +LHG         AL  F  + R      D  T   ++  L R G++  A  +L  M +
Sbjct: 156 TLLHGLCLDHRVSEALDLFHQICRP-----DVLTFTTLMNGLCREGRVVEAVALLDRMVE 210

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG-VERSVKSYDALFKLILRRGRYM 143
            G+Q D+  +   ++   K G    ++ +   M+++  ++ +V  Y A+   + + GR+ 
Sbjct: 211 NGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHS 270

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            +   F +M  +GI P   TYN M+ GF +S +   A R  ++M  R IS +VVTYN +I
Sbjct: 271 DSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           N + +  K  EA +L+ EM  + I P  I+Y +MI G+   +R D A  +F  M +    
Sbjct: 331 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS 390

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+  T+T L+ G C A ++ +  ++L EM  R +   +   +  L+   C  G LNAA D
Sbjct: 391 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLV-ANTVTYNTLIHGFCLVGDLNAALD 449

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + + MI   +  +      L++  C       A+++   +         +S +D++AS  
Sbjct: 450 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM--------QKSKMDLDAS-- 499

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
           +P       NG                  D + +N LI G   EG    A E+ + M  R
Sbjct: 500 HPF------NGVEP---------------DVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  D   Y  +I+   ++    +A     SM     SP    F +++    + GRV   
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
             +   M  +G+  +  +   ++      G++  AL     M+ SG  P+  ++ ++L+
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 657



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 214/484 (44%), Gaps = 31/484 (6%)

Query: 177 LETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           LE AI  F DM +SR +   V+ +N ++    R ++ D    L+ +M+ K I   + S+T
Sbjct: 62  LEDAIDLFSDMLRSRPLP-SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFT 120

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +IK + +  +   AL  F ++    + P+ VT+T LL GLC   ++ E   +  ++   
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR- 179

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
                D   F  L+   C+ G +  A  +L  M+   +  +   YG  ++  CK      
Sbjct: 180 ----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A+ LL K+ E   I +P   +      Y+ +I  LC +G+   +   F ++  KG+  + 
Sbjct: 236 ALNLLRKMEEISHI-KPNVVI------YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +N +I G    G   +A  +++ M  R +  +   Y  LI +++++G+  +A    D 
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDE 348

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+  G  P +  + S+++   +  R+  A  +   M  KG   ++     +++       
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +++ +  +  M + G V N   +++L+      G   AA+ L    +      D+ +   
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468

Query: 592 VLDALLAAGKTLNAYSILFKIMEK------------GGVTDWKSSDKLIAGLNQEGNTKQ 639
           +LD L   GK  +A   +FK M+K            G   D  + + LI GL  EG   +
Sbjct: 469 LLDGLCDNGKLKDALE-MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 640 ADIL 643
           A+ L
Sbjct: 528 AEEL 531



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 90/181 (49%)

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           P  GV+ D   + +LI     +G   E+ ++++ M   G+     +Y ++   + ++ R 
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A + F  M S+   P   T+N ++ G+  + +++  +  F +M  RGI  D + Y T+
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 620

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G+ +   ++ A  +F EM    + P  I+   M+ G+ + E  + A+ + ++++ + +
Sbjct: 621 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQL 680

Query: 263 K 263
           +
Sbjct: 681 E 681



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 61/134 (45%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  MI+ L +  +L+ A  + + M  K    +   F  LI  Y K G V + +++F
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M + G+      Y  L     + G    A   F +M+S G+ P   T   ML GF+  
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662

Query: 175 LKLETAIRFFEDMK 188
            +LE A+   ED++
Sbjct: 663 EELERAVAMLEDLQ 676



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 72/159 (45%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK   A  +  +MP +G+  D   +  +I+   K+  + E+ ++F  M       +V ++
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     + GR       F +M   GI      Y  +++GF     +  A+  F++M S
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G+  D +T   M+ G+   ++++ A  +  +++   +E
Sbjct: 643 SGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLE 681


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 211/491 (42%), Gaps = 45/491 (9%)

Query: 40  LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIE 99
           + FF+W      +NH   ++  ++E+L + G+ +H      DM   G   +   +  L+ 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60

Query: 100 SYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
           S  +    +E+  +F  M   G   +V SY  L   + R  +   A    N+M+  G +P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
              TY  +L G     KL+ A+  F  M  RG   D V YN +I+G+++   M EA +LF
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
            EM EK   PTV +Y +++ G+           +F +M      PN  T+  LL G C  
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
           G MVE  ++  EM     PP D   +  L+   C  G  + A  +L+ MIR  +  +   
Sbjct: 241 GDMVEAHRLFLEMRSLGCPP-DVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y ILI+ + K+   D AIKL  ++        P+S L+ +A SY+ +I  LC  G+ G A
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEI--------PKSGLEPDAFSYSTIIDCLCRAGKVGAA 351

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
            + F+ ++  G                   PD+A  I  ++G                  
Sbjct: 352 FVVFKDMIANG-----------------SAPDAAVVIPLVIG------------------ 376

Query: 460 LRKGEPADAKTAL-DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           L +GE       L  +M++    P    +  +M  L +  R      +   + E+G   +
Sbjct: 377 LCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436

Query: 519 LDLVAKILEAL 529
           +++   ILE L
Sbjct: 437 VEISKVILETL 447



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/450 (21%), Positives = 198/450 (44%), Gaps = 13/450 (2%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
            ++YN ++    +  + D     + +M      P   +Y  +++     +R ++A  +F 
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
            M +    PN  +Y+ L+ GLC   K+ E  ++L EM++    P +   +  LL   CK 
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP-NVVTYGSLLSGLCKM 135

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G L  A D+   M+    P +   Y +LI+ F K      A +L ++++EK  I      
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI------ 189

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
                 +YN ++      G+ G+ +  F+ ++++G +  +  FNNL+ G  K G+   A 
Sbjct: 190 --PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAH 247

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +   M   G P D  +Y  LI     KG+P +A+  L  MI  G  P    +  +++  
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF 554
            + G +  A ++   + + G++ +    + I++ L   G V  A      M+ +GS P+ 
Sbjct: 308 SKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDA 367

Query: 555 DSLLSV---LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++ +   L    +   + +L    +  +C+  +  Y  ++  L  A ++ +   I  +
Sbjct: 368 AVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHE 427

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           + E+G   D + S  ++  L +  +   A+
Sbjct: 428 LTERGFSPDVEISKVILETLRRSDDKDAAE 457



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 5/272 (1%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           SYN +++ L  +G+       +  ++  G V +   +  L+R   +    + A  + + M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G   +  +Y  LI    R  +  +A   L+ MI+ GH P    + S++  L + G++
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
           + A  +   MV +G   +  +   +++    +G + EA    + M++ G +P    ++SL
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           LS  S KG+      L    L + C+ ++ ++  +LD     G  + A+ +  ++   G 
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 618 VTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIR 648
             D  S + LI G+  +G   +A  +L  MIR
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIR 290



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 35/197 (17%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  ++  +I  +   GK + A+ +L +M + GV  D   + +LI+ Y K G +  ++K+F
Sbjct: 261 DVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF 320

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT----------- 163
             + + G+E    SY  +   + R G+   A   F  M++ G  P               
Sbjct: 321 YEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380

Query: 164 ------------------------YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                                   YN++++    + + +     F ++  RG S DV   
Sbjct: 381 ERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEIS 440

Query: 200 NTMINGYNRFKKMDEAE 216
             ++    R    D AE
Sbjct: 441 KVILETLRRSDDKDAAE 457


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 232/484 (47%), Gaps = 14/484 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F+ LI+S        E+ + F  MK+ GV  ++++ ++L  L L+  R   A   + +M
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
               I+ + +T+N+M+       KL+ A  F   M++ G+  ++VTYNT+++GY    ++
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A+ +   MK + IEP   +Y ++I G     R ++A +IF+EM    ++P+AV Y  L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C+ G +        EM+++ I P   S +  L+         + A  ++K +    
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPT-MSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I  +A  Y ILI  +C+     +A  L D+++   I  +P         +Y  ++  L  
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI--KPTK------KTYTSLLHVLSK 443

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  +A+  F+++  +GVL D + FN LI GH    N   AFE++K M R  VP D   
Sbjct: 444 KNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT 503

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +  +++ + R+G+  +A+   D M   G  P    F +++      G ++ A RV   M+
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAV 571
           + G    +     +++ L      + A   +  M+  G  P+  +  +++    + IA V
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI----EGIAKV 619

Query: 572 KLLD 575
            + D
Sbjct: 620 NIPD 623



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 206/432 (47%), Gaps = 12/432 (2%)

Query: 2   AERAWTTRLQN-KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
            E AW    +  ++R     +  N++ NVL      + A  F   +E +G+   +  T+ 
Sbjct: 202 TEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGV-KPNIVTYN 260

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            ++      G++  A  IL  M ++ ++ D   +  LI    K+G ++E+ KIF+ M Q 
Sbjct: 261 TIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK 320

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+  S   Y+ L      +G   MA  Y ++ML +GI PT  TYN ++   F+  + + A
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEA 380

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
               ++++ +GIS D +TYN +INGY R     +A  L  EM    I+PT  +YT+++  
Sbjct: 381 ECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                R  +A  +F ++ S  V P+A+ + AL+ G C    +    ++L++M    +PP 
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP- 499

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  ++   C+ G +  A ++   M R  I  +   +  LI  + +      A ++ 
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           +++++        +  +    +YN ++Q LC N +   AE   ++++ KG+  D   +  
Sbjct: 560 NEMLD--------TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611

Query: 420 LIRGHSKEGNPD 431
           LI G +K   PD
Sbjct: 612 LIEGIAKVNIPD 623



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 205/435 (47%), Gaps = 10/435 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M +KGV    +    L+  + K    + +  ++  M +L ++ SV +++ +  ++ + G+
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              AK +   M + G++P   TYN ++ G+  S ++E A      MK + I  D  TY +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G  +  +++EA K+F EM +K + P+ + Y T+I G+      D A    DEM    
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P   TY +L+  L    +  E + +++E+ E+ I P D   +  L+   C+  +   A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP-DAITYNILINGYCRCANAKKA 415

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   M+   I      Y  L+    K      A  L  K+  + ++  P + +     
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL--PDAIM----- 468

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            +N +I   C N     A    + + +  V  D V FN +++GH +EG  + A E+   M
Sbjct: 469 -FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM 527

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            RRG+  D  ++  LI  Y R+G+  DA    + M++ G +P    + ++++ L ++   
Sbjct: 528 KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEG 587

Query: 501 QTASRVMKSMVEKGV 515
             A  ++K MV KG+
Sbjct: 588 DLAEELLKEMVSKGM 602



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/460 (23%), Positives = 209/460 (45%), Gaps = 11/460 (2%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           ++ A + F  ++  G+     ET   ++ +  ++ +   A  +  +M +  ++     F 
Sbjct: 167 ADEAFECFYTMKEKGVL-PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFN 225

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           ++I    K+G ++++      M+  GV+ ++ +Y+ +       GR   A      M  +
Sbjct: 226 IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            IEP   TY  ++ G     +LE A + FE+M  +G+    V YNT+I+G+     +D A
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
                EM +K I PT+ +Y ++I      +R D+A  +  E++   + P+A+TY  L+ G
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            C      +   +  EM+   I P   + +  LL V  K   +  A D+ K +    +  
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKT-YTSLLHVLSKKNRMKEADDLFKKITSEGVLP 464

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +A  +  LI+  C       A +LL  +   ++   P   +     ++N ++Q  C  G+
Sbjct: 465 DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKV---PPDEV-----TFNTIMQGHCREGK 516

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A   F ++ ++G+  D ++FN LI G+S+ G+   AF +   M   G       Y  
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           L++   +  E   A+  L  M+  G +P  + + +++E +
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 210/467 (44%), Gaps = 26/467 (5%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + ++ +I       + DEA + F  MKEK + PT+ +  +++  ++ + R + A  ++ E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    +K +  T+  ++  LC  GK+ + +  +  M    + P +   +  ++   C SG
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKP-NIVTYNTIVHGYCSSG 270

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            + AA  +L  M R  I  ++  YG LI   CK    + A K+ +++V+K   LRP + +
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG--LRPSAVI 328

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFE 435
                 YN +I   C+ G    A  +  +++KKG+   ++ +N+LI     E   D A  
Sbjct: 329 ------YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAEC 382

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           ++K +  +G+  DA  Y  LI  Y R      A    D M+  G  P    + S++  L 
Sbjct: 383 MIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLS 442

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE--------EALGRIDLMMQ 547
           +  R++ A  + K +  +GV     L   I+   L+ GH          E L  +D M  
Sbjct: 443 KKNRMKEADDLFKKITSEGV-----LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497

Query: 548 SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
                 F++++     +GK   A +L D    R    D  S+  ++      G   +A+ 
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 608 ILFKIMEKGGVTDWKSSDKLIAGL--NQEGNTKQADILSRMIRGEMS 652
           +  ++++ G      + + L+ GL  NQEG+  + ++L  M+   M+
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE-ELLKEMVSKGMT 603



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 178/429 (41%), Gaps = 58/429 (13%)

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I +  +IK    + RAD+A   F  MK   V P   T  +LL                  
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLL------------------ 193

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA-MIRLSIPTEAGHYGILIENFCKA 350
                      S+F+KL        +   AA VL A M RL I +    + I+I   CK 
Sbjct: 194 -----------SLFLKL--------NRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKE 234

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
               +A   +  +          S +     +YN ++   C +G+   A+      MK+ 
Sbjct: 235 GKLKKAKDFVGHM--------ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTT-MKRQ 285

Query: 411 VLDPVAFN--NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
            ++P +F   +LI G  K+G  + A +I + M ++G+   A  Y  LI+ +  KG    A
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
               D M++ G SP  S + S++ +LF + R   A  ++K + EKG+  +      ++  
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405

Query: 529 LLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
                + ++A    D M+ SG  P    + SLL VLS+K +   A  L         + D
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQADILS 644
              +  ++D   +      A+ +L K M++  V  D  + + ++ G  +EG  ++A    
Sbjct: 466 AIMFNALIDGHCSNSNVKGAFELL-KDMDRMKVPPDEVTFNTIMQGHCREGKVEEA---- 520

Query: 645 RMIRGEMSR 653
           R +  EM R
Sbjct: 521 RELFDEMKR 529



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 110/227 (48%), Gaps = 1/227 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ N      N++ A      +  +G+    ++T+  ++ +L +  ++  A  +   +
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGI-KPTKKTYTSLLHVLSKKNRMKEADDLFKKI 457

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +GV  D  MF  LI+ +     V+ + ++   M ++ V     +++ + +   R G+ 
Sbjct: 458 TSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKV 517

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F++M   GI+P   ++N ++ G+     ++ A R   +M   G +  V+TYN +
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNAL 577

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           + G  + ++ D AE+L  EM  K + P   +Y T+I+G   V   D+
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/272 (20%), Positives = 106/272 (38%), Gaps = 38/272 (13%)

Query: 410 GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV-----------------PRDADAY 452
           G    + F+ LI+        D AFE    M  +GV                  R   A+
Sbjct: 147 GFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAW 206

Query: 453 ICLIESY------------------LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           +   E +                   ++G+   AK  +  M   G  P    + +++   
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY 266

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
              GRV+ A  ++ +M  + ++ +      ++  +  +G +EEA    + M+Q G  P+ 
Sbjct: 267 CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSA 326

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             +++L+     KG    A    D  L +     +++Y  ++ AL    +T  A  ++ +
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           I EKG   D  + + LI G  +  N K+A +L
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLL 418


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 231/531 (43%), Gaps = 65/531 (12%)

Query: 28  NVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
            +LHG         AL FF  + +  +          ++  L R G++  A  +L  M +
Sbjct: 151 TLLHGLCVEDRVSEALHFFHQICKPNVI-----AFTTLMNGLCREGRVVEAVALLDRMVE 205

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG-VERSVKSYDALFKLILRRGRYM 143
            G+Q ++  +  +++   K G    ++ +   M+++  ++ +V  Y A+   + + GR  
Sbjct: 206 DGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQT 265

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR--------------------- 182
            A+  F++M  +GI P   TYN M+ GF  S +   A R                     
Sbjct: 266 DAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLI 325

Query: 183 --------FFE------DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
                   FFE      +M  RGI  + +TYN+MI+G+++  ++D AE++F  M  K   
Sbjct: 326 NALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCS 385

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P VI+++ +I GY   +R DD +++  EM    +  N +TYT L+ G C  G +     +
Sbjct: 386 PDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL 445

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH--------- 339
           L+EM+   + P   +    L G+ C +G L  A ++ K M +  +  +A H         
Sbjct: 446 LQEMISSGVCPNVVTCNTLLDGL-CNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDV 504

Query: 340 --YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y ILI        +  A +L +++        P   L  +  +YN +I  LC   +  
Sbjct: 505 QTYNILICGLINEGKFSEAEELYEEM--------PHRGLVPDTITYNSVIDGLCKQSRLD 556

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A   F  +  KG   D V F  LI G+ K G      E+   MGRRG+  +A  Y  LI
Sbjct: 557 EATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLI 616

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
             + + G    A      MI  G  P +   R+++  L+    ++ A + +
Sbjct: 617 HGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/544 (20%), Positives = 234/544 (43%), Gaps = 27/544 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++ +F  M +      V  +  L  +++R  R  +      KM    I    +++ +
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    KL  A+  F  +   G    +VT++T+++G     ++ EA   F ++    
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI---- 172

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P VI++TT++ G     R  +A+ + D M    ++PN +TY  ++ G+C  G  V   
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +LR+M E      +  ++  ++    K G    A ++   M    I      Y  +I  
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
           FC +  +  A +LL ++ E++        +  +  +++ +I  L   G+  +AE  + ++
Sbjct: 293 FCSSGRWSEAQRLLREMFERK--------MSPDVVTFSVLINALVKEGKFFEAEELYNEM 344

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           + +G++ + + +N++I G SK+   D+A  +  +M  +G   D   +  LI+ Y      
Sbjct: 345 LPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRV 404

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            D    L  M   G    +  + +++    + G +  A  +++ M+  GV  N+     +
Sbjct: 405 DDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTL 464

Query: 526 LEALLMRGHVEEALGRIDLMMQS--------------GSVPNFDSLLSVLSEKGKTIAAV 571
           L+ L   G +++AL    +M +S                V  ++ L+  L  +GK   A 
Sbjct: 465 LDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAE 524

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           +L +    R  + D  +Y  V+D L    +   A  +   +  KG   D  +   LI G 
Sbjct: 525 ELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGY 584

Query: 632 NQEG 635
            + G
Sbjct: 585 CKVG 588



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/490 (21%), Positives = 203/490 (41%), Gaps = 66/490 (13%)

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVI------------------------------- 232
           +G++  K +D+A  LF  M      P VI                               
Sbjct: 49  SGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIP 108

Query: 233 ----SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
               S+T +IK + +  +   AL  F ++      P+ VT++ LL GLC   ++ E    
Sbjct: 109 CNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHF 168

Query: 289 LREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
             ++       K N + F  L+   C+ G +  A  +L  M+   +      YG +++  
Sbjct: 169 FHQIC------KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           CK      A+ LL K+ E   I +P   +      Y+ +I  L  +G+   A+  F ++ 
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRI-KPNVVI------YSAIIDGLWKDGRQTDAQNLFSEMQ 275

Query: 408 KKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
           +KG+  +   +N +I G    G    A  +++ M  R +  D   +  LI + +++G+  
Sbjct: 276 EKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFF 335

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A+   + M+  G  P +  + S+++   +  R+  A R+   M  KG   ++   + ++
Sbjct: 336 EAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILI 395

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
           +       V++ +  +  M + G V N   + +L+    + G   AA+ LL   +     
Sbjct: 396 DGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVC 455

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV------------TDWKSSDKLIAGL 631
            ++ +   +LD L   GK  +A   +FK+M+K  +             D ++ + LI GL
Sbjct: 456 PNVVTCNTLLDGLCNNGKLKDALE-MFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL 514

Query: 632 NQEGNTKQAD 641
             EG   +A+
Sbjct: 515 INEGKFSEAE 524



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/228 (21%), Positives = 100/228 (43%), Gaps = 9/228 (3%)

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
           PD    + + M  R +P +  ++  LI+ +    +   A +    + + G  P+   F +
Sbjct: 92  PDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFST 151

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++  L  + RV  A      +     K N+     ++  L   G V EA+  +D M++ G
Sbjct: 152 LLHGLCVEDRVSEALHFFHQIC----KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDG 207

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI-IDLASYEKVLDALLAAGKTLNA 605
             PN   + +++  + + G T++A+ LL        I  ++  Y  ++D L   G+  +A
Sbjct: 208 LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDA 267

Query: 606 YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGEMS 652
            ++  ++ EKG   +  + + +I G    G   +A  +L  M   +MS
Sbjct: 268 QNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMS 315


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 197/431 (45%), Gaps = 23/431 (5%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++  +I+   K G   +S  +F  M+  G+  ++ +Y+ +       GR+  A+R   +M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L   I P   TYN ++  F    K   A   +++M  RGI  + +TYN+MI+G+ +  ++
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D AE +F  M  K   P V ++TT+I GY   +R DD + +  EM    +  N VTY  L
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G +     + ++M+   + P D      LL   C +G L  A ++ KAM +  
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCP-DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 333 IPTEAGH-----------YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
           +  +A H           Y ILI        +  A +L +++  + I+  P +       
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV--PDTI------ 545

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKI 439
           +Y+ MI  LC   +  +A   F  +  K    P  V FN LI G+ K G  D   E+   
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGSKS-FSPNVVTFNTLINGYCKAGRVDDGLELFCE 604

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           MGRRG+  DA  YI LI  + + G    A      MI  G  P +   R+++   +    
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664

Query: 500 VQTASRVMKSM 510
           ++ A  +++ +
Sbjct: 665 LERAVAMLEDL 675



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 238/539 (44%), Gaps = 41/539 (7%)

Query: 28  NVLHGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
            +LHG         AL  F  + R      D  T   ++  L R G++  A  +L  M +
Sbjct: 156 TLLHGLCLDHRVSEALDLFHQICRP-----DVLTFTTLMNGLCREGRVVEAVALLDRMVE 210

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG-VERSVKSYDALFKLILRRGRYM 143
            G+Q D+  +   ++   K G    ++ +   M+++  ++ +V  Y A+   + + GR+ 
Sbjct: 211 NGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHS 270

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            +   F +M  +GI P   TYN M+ GF +S +   A R  ++M  R IS +VVTYN +I
Sbjct: 271 DSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           N + +  K  EA +L+ EM  + I P  I+Y +MI G+   +R D A  +F  M +    
Sbjct: 331 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS 390

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+  T+T L+ G C A ++ +  ++L EM  R +   +   +  L+   C  G LNAA D
Sbjct: 391 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLV-ANTVTYNTLIHGFCLVGDLNAALD 449

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + + MI   +  +      L++  C       A+++   +         +S +D++AS  
Sbjct: 450 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM--------QKSKMDLDAS-- 499

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
           +P       NG                  D + +N LI G   EG    A E+ + M  R
Sbjct: 500 HPF------NGVEP---------------DVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  D   Y  +I+   ++    +A     SM     SP    F +++    + GRV   
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
             +   M  +G+  +  +   ++      G++  AL     M+ SG  P+  ++ ++L+
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 657



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 213/482 (44%), Gaps = 31/482 (6%)

Query: 177 LETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           LE AI  F DM +SR +   V+ +N ++    R ++ D    L+ +M+ K I   + S+T
Sbjct: 62  LEDAIDLFSDMLRSRPLP-SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFT 120

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +IK + +  +   AL  F ++    + P+ VT+T LL GLC   ++ E   +  ++   
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR- 179

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
                D   F  L+   C+ G +  A  +L  M+   +  +   YG  ++  CK      
Sbjct: 180 ----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A+ LL K+ E   I +P   +      Y+ +I  LC +G+   +   F ++  KG+  + 
Sbjct: 236 ALNLLRKMEEISHI-KPNVVI------YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +N +I G    G   +A  +++ M  R +  +   Y  LI +++++G+  +A    D 
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDE 348

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+  G  P +  + S+++   +  R+  A  +   M  KG   ++     +++       
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +++ +  +  M + G V N   +++L+      G   AA+ L    +      D+ +   
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468

Query: 592 VLDALLAAGKTLNAYSILFKIMEK------------GGVTDWKSSDKLIAGLNQEGNTKQ 639
           +LD L   GK  +A   +FK M+K            G   D  + + LI GL  EG   +
Sbjct: 469 LLDGLCDNGKLKDALE-MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 640 AD 641
           A+
Sbjct: 528 AE 529



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 87/176 (49%)

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           P  GV+ D   + +LI     +G   E+ ++++ M   G+     +Y ++   + ++ R 
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A + F  M S+   P   T+N ++ G+  + +++  +  F +M  RGI  D + Y T+
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 620

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           I G+ +   ++ A  +F EM    + P  I+   M+ G+ + E  + A+ + ++++
Sbjct: 621 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 5/168 (2%)

Query: 25  LVYNVLHGAKNSE----HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           L YN+L     +E     A + +  +   G+   D  T+  MI+ L +  +L+ A  + +
Sbjct: 510 LTYNILICGLINEGKFLEAEELYEEMPHRGIV-PDTITYSSMIDGLCKQSRLDEATQMFV 568

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M  K    +   F  LI  Y K G V + +++F  M + G+      Y  L     + G
Sbjct: 569 SMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 628

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
               A   F +M+S G+ P   T   ML GF+   +LE A+   ED++
Sbjct: 629 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 70/154 (45%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK   A  +  +MP +G+  D   +  +I+   K+  + E+ ++F  M       +V ++
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     + GR       F +M   GI      Y  +++GF     +  A+  F++M S
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
            G+  D +T   M+ G+   ++++ A  +  +++
Sbjct: 643 SGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/548 (22%), Positives = 252/548 (45%), Gaps = 17/548 (3%)

Query: 27  YN-VLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           YN V+HG         A   F  + + G+   D  T+   I+ L +   ++ A  +L  M
Sbjct: 230 YNTVIHGFFREGEVSKACNLFHEMMQQGVV-PDVVTYSSYIDALCKARAMDKAELVLRQM 288

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G + D+  +  +I  Y   G  +E+  +F  M + G+   + + ++    + + G+ 
Sbjct: 289 ISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKS 348

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A  +F+ M ++G +P   TY+V+L G+     +   +  F  M+  GI  D   YN +
Sbjct: 349 KEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNIL 408

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+ Y +   MDEA  +F +M+E+ + P   +Y T+I  +  + R  DA+  F++M +  +
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           KP+ + Y +L+ G C  G +V+ ++++ EM+ R IP  +   F  ++   CK G +  A 
Sbjct: 469 KPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQ 528

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           D+   +I +    +   +  LI+ +      ++A  +LD ++   I        + +  +
Sbjct: 529 DIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGI--------EPDVVT 580

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y+ ++   C NG+     I FR+++ KGV    + +  ++ G   +G    A ++   M 
Sbjct: 581 YSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMI 640

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
             G   D      ++    R     +A      +         ++  ++++++++  + +
Sbjct: 641 ESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKRE 700

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A+ +  S+   G+  N      ++  LL  G VEEA     LM +SG  P+    ++++
Sbjct: 701 EANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNII 760

Query: 559 SVLSEKGK 566
            VL EKG+
Sbjct: 761 RVLLEKGE 768



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 236/529 (44%), Gaps = 13/529 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  +I  + ++G V ++  +F  M Q GV   V +Y +    + +      A+    +M+
Sbjct: 230 YNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMI 289

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S G EP + TYN M+ G+ +  + +     F +M  RG+  D+ T N+ ++   +  K  
Sbjct: 290 SNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSK 349

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA + F  M  K  +P +++Y+ ++ GY A     D L +F+ M+   +  +   Y  L+
Sbjct: 350 EAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILI 409

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
                 G M E   +  +M ER + P D   +  ++    + G L  A D    MI + +
Sbjct: 410 DAYGKRGMMDEAMLIFTQMQERGVMP-DAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y  LI+ FC      +A +L+ +++ + I  RP +        +N +I  LC  
Sbjct: 469 KPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIP-RPNTVF------FNSIINSLCKE 521

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+  +A+  F  ++  G   D + FN+LI G+   G  + AF ++  M   G+  D   Y
Sbjct: 522 GRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTY 581

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L++ Y R G   D       M+  G  P +  +  ++  LF DGR   A ++   M+E
Sbjct: 582 SALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALG---RIDLMMQSGSVPNFDSLLSVLSEKGKTIA 569
            G   ++     IL  L      +EA+    ++  M    ++   ++++  + +  K   
Sbjct: 642 SGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREE 701

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
           A +L D       + + ++Y  ++  LL  G    A + +F +MEK G 
Sbjct: 702 ANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADN-MFSLMEKSGC 749



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/562 (23%), Positives = 243/562 (43%), Gaps = 46/562 (8%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRY 142
           K G++ D  +  +L++         ++V +    M +LGVE    SY  + K +    R 
Sbjct: 147 KTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRS 206

Query: 143 MMAKRYFNKML--SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
             A    + M+  S G  P   +YN ++ GFF   ++  A   F +M  +G+  DVVTY+
Sbjct: 207 QRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYS 266

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           + I+   + + MD+AE +  +M     EP  ++Y  MI GY  + +  +   +F EM   
Sbjct: 267 SYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRR 326

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+  T  + +  LC  GK  E  +    M  +   P D   +  LL      G++  
Sbjct: 327 GLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKP-DLVTYSVLLHGYAAEGYVVD 385

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
             ++  +M    I  +   Y ILI+ + K  M D A+ +  ++ E+ ++  P      +A
Sbjct: 386 MLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVM--P------DA 437

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y  +I      G+   A   F Q++  G+  D + +N+LI+G    GN   A E++  
Sbjct: 438 WTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISE 497

Query: 440 MGRRGVPRDADAYI-CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
           M  RG+PR    +   +I S  ++G   +A+   D +I  G  P    F S+++     G
Sbjct: 498 MMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVG 557

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL 558
           +++ A  V+ +M+  G++ ++   + +L+     G +++ L     M+  G  P      
Sbjct: 558 KMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPT----- 612

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
                   TI                   +Y  +L  L   G+T+ A  +  +++E G  
Sbjct: 613 --------TI-------------------TYGIILHGLFNDGRTVGAKKMCHEMIESGTT 645

Query: 619 TDWKSSDKLIAGLNQEGNTKQA 640
            D  +   ++ GL +     +A
Sbjct: 646 MDISTCGIILGGLCRNNCDDEA 667



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 223/502 (44%), Gaps = 50/502 (9%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L+P  F  N   + L     S+ A +FF  +   G    D  T+  ++      G + 
Sbjct: 326 RGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKG-HKPDLVTYSVLLHGYAAEGYVV 384

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
               +   M   G+  D  ++ +LI++YGK+G++ E++ IF  M++ GV     +Y  + 
Sbjct: 385 DMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVI 444

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI- 192
               R GR   A   FN+M++ G++P    YN ++ GF +   L  A     +M SRGI 
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIP 504

Query: 193 ------------SL-----------------------DVVTYNTMINGYNRFKKMDEAEK 217
                       SL                       DV+T+N++I+GY    KM++A  
Sbjct: 505 RPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFG 564

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           +   M    IEP V++Y+ ++ GY    R DD L +F EM S  VKP  +TY  +L GL 
Sbjct: 565 VLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLF 624

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
           + G+ V  +K+  EM+E      D S    +LG  C++   + A  + K +  +++    
Sbjct: 625 NDGRTVGAKKMCHEMIESGTT-MDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNI 683

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
                +I+   K    + A +L D +    ++  P       AS+Y  MI +L   G   
Sbjct: 684 AIINTMIDAMYKVRKREEANELFDSISATGLV--PN------ASTYGVMITNLLKEGSVE 735

Query: 398 KAEIFFRQLMKKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
           +A+  F  LM+K    P +   NN+IR   ++G    A   +  +  + +  +A     +
Sbjct: 736 EADNMF-SLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLM 794

Query: 456 IESYLRKGEPADAKTALDSMIE 477
           +  + RKG+  +   +L +M +
Sbjct: 795 LSLFSRKGKYREQIKSLPAMYQ 816



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 106/495 (21%), Positives = 211/495 (42%), Gaps = 34/495 (6%)

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           E+ + R     V TYN +++   R  +      LF    +  ++  VI    ++K     
Sbjct: 108 EEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHA 167

Query: 245 ERADDALRI-FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
           +R+DDA+ +    M    V+P+ ++Y+ +L  LC+  +      +L  MV++      N 
Sbjct: 168 KRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNV 227

Query: 304 V-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           V +  ++    + G ++ A ++   M++  +  +   Y   I+  CKA   D+A  +L +
Sbjct: 228 VSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQ 287

Query: 363 LVEK----------------EIILRPQSTLDM-----------EASSYNPMIQHLCHNGQ 395
           ++                   I+ + + T  M           +  + N  +  LC +G+
Sbjct: 288 MISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGK 347

Query: 396 TGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
           + +A  FF  +  KG   D V ++ L+ G++ EG       +   M   G+  D   Y  
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNI 407

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI++Y ++G   +A      M E G  P +  + +V+ +    GR+  A      M+  G
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-SVPN---FDSLLSVLSEKGKTIAA 570
           +K +  +   +++   M G++ +A   I  MM  G   PN   F+S+++ L ++G+ + A
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             + D  +      D+ ++  ++D     GK   A+ +L  ++  G   D  +   L+ G
Sbjct: 528 QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587

Query: 631 LNQEGNTKQADILSR 645
             + G      IL R
Sbjct: 588 YCRNGRIDDGLILFR 602



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/369 (20%), Positives = 154/369 (41%), Gaps = 14/369 (3%)

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            ++ RE     +       +  L+   C++        +    ++  + T+     IL++
Sbjct: 103 NRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLK 162

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             C A+  D A+ +L       +   P+  ++ +  SY+ +++ LC + ++ +A      
Sbjct: 163 CLCHAKRSDDAVNVL-------LHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHT 215

Query: 406 LMKK-GVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           ++KK G   P  V++N +I G  +EG    A  +   M ++GV  D   Y   I++  + 
Sbjct: 216 MVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKA 275

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
                A+  L  MI +G  P    +  ++      G+ +  + + + M  +G+  ++   
Sbjct: 276 RAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTC 335

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLG 579
              + +L   G  +EA    D M   G  P+   +  LL   + +G  +  + L +   G
Sbjct: 336 NSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEG 395

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
              + D + Y  ++DA    G    A  I  ++ E+G + D  +   +IA  ++ G    
Sbjct: 396 NGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLAD 455

Query: 640 A-DILSRMI 647
           A D  ++MI
Sbjct: 456 AMDKFNQMI 464


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 152/660 (23%), Positives = 280/660 (42%), Gaps = 52/660 (7%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W + ++N++  L    +  LV  VL   K+  +A+ +FRW ER     H RE +  ++ +
Sbjct: 80  WGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMV 139

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQES--------------- 110
           + R  K N    IL +M   G     +    ++ S+ K   ++E+               
Sbjct: 140 MARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPA 199

Query: 111 --------------------VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
                               + +F  M++LG   +V  +  L ++  R GR   A    +
Sbjct: 200 FSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLD 259

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +M S  +EP    YNV +  F  + K++ A + F +MK+ G+ LD VTY +MI    +  
Sbjct: 260 EMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKAD 319

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +++EA +LF  M +    P   +Y TMI GY    + +DA  + +  +     P+ V+Y 
Sbjct: 320 RLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYN 379

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            +L  L   G++ E  K   EM +  IP  + S +  ++ + CK+G L  A  V  AM  
Sbjct: 380 CILSCLGRKGQVDEALKKFEEMKKDAIP--NLSTYNIMIDMLCKAGKLETALVVRDAMKD 437

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +        I+++  CKA+  D A  + + L  K    RP      +A +Y  +I+ L
Sbjct: 438 AGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK--TCRP------DAVTYCSLIEGL 489

Query: 391 CHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
             +G+  +A   + Q++    + + V + +LIR   K G  +   +I   M R G   D 
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
                 ++   + GE    +     +   G  P +  +  ++  L + G    A  +  +
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT 609

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGK 566
           M E+G   +      +++     G V +A   ++ M   G  P    + S++  L++  +
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDR 669

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG---GVTDWKS 623
              A  L +    +   +++  Y  ++D     G+   AY I+ ++M+KG    V  W  
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 150/633 (23%), Positives = 283/633 (44%), Gaps = 22/633 (3%)

Query: 19  PQFD--HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL--KMIEILGRVGKLNH 74
           P F    NL+   L  +++S+  L  F+ ++  G   +    HL   +I +  R G+++ 
Sbjct: 198 PAFSAYTNLI-GALSTSRDSDCMLTLFQQMQELG---YAVNVHLFTTLIRVFAREGRVDA 253

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +L +M    ++ D  ++ V I+ +GK G V  + K F  MK  G+     +Y ++  
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIG 313

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
           ++ +  R   A   F  M      P  + YN M+ G+ ++ K E A    E  + +G   
Sbjct: 314 VLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            VV+YN +++   R  ++DEA K F EMK+  I P + +Y  MI       + + AL + 
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVR 432

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           D MK   + PN +T   ++  LC A ++ +   +   +  +   P D   +  L+    +
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP-DAVTYCSLIEGLGR 491

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G ++ A  + + M+  +    A  Y  LI NF K    +   K+ +++      LR   
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM------LRLGC 545

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
           + D+     N  +  +   G+  K    F+++   G + D  ++  LI G  K G    A
Sbjct: 546 SPDLLL--LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA 603

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           +E+   M  +G   D  AY  +I+ + + G+   A   L+ M   GH P    + SV++ 
Sbjct: 604 YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L +  R+  A  + +    KG++ N+ + + +++     G ++EA   ++ +MQ G  PN
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 723

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              ++ LL  L +  +   A+          C  +  +Y  ++  L    K   A+    
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           ++ ++G   +  +   +I+GL + GN  +AD L
Sbjct: 784 EMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 211/464 (45%), Gaps = 13/464 (2%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A   R   K   L P     N++ + L  A+  + A   F  ++       D  T+  
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC-RPDAVTYCS 484

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +IE LGR G+++ A  +   M       +  ++  LI ++ K G  ++  KI++ M +LG
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG 544

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               +   +     + + G     +  F ++ + G  P   +Y +++ G   +     A 
Sbjct: 545 CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAY 604

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F  MK +G  LD   YNT+I+G+ +  K+++A +L  EMK K  EPTV++Y ++I G 
Sbjct: 605 ELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             ++R D+A  +F+E KS  ++ N V Y++L+ G    G++ E   ++ E++++ + P +
Sbjct: 665 AKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP-N 723

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  LL    K+  ++ A    ++M  L        Y ILI   CK   +++A     
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPVAFNNL 420
           ++ ++    +P         +Y  MI  L   G   +A+  F +  +K GV D   +N +
Sbjct: 784 EMQKQG--FKPN------VFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAI 835

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           I G S       A+ + +    +G        + L++S L K E
Sbjct: 836 IEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDS-LHKAE 878



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/536 (23%), Positives = 225/536 (41%), Gaps = 33/536 (6%)

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           ++Y++L  ++ R  ++   ++   +M   G  P+ +T   ++  F  S KL  A  F + 
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M+          Y  +I   +  +  D    LF +M+E      V  +TT+I+ +    R
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            D AL + DEMKS  ++P+ V Y   +     AGK+    K   EM    +   D+  + 
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVL-DDVTYT 309

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            ++GV CK+  LN A ++ + M +      A  Y  +I  +  A  ++ A  LL++   K
Sbjct: 310 SMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRK 369

Query: 367 EII----------------------LRPQSTLDMEA----SSYNPMIQHLCHNGQTGKAE 400
             I                      L+    +  +A    S+YN MI  LC  G+   A 
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETA- 428

Query: 401 IFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           +  R  MK   L P  +  N ++    K    D A  I + +  +    DA  Y  LIE 
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             R G   +A    + M++    P + ++ S++ + F+ GR +   ++   M+  G   +
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           L L+   ++ +   G +E+       +   G +P+   +  L+  L + G    A +L  
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
               + C++D  +Y  V+D    +GK   AY +L ++  KG      +   +I GL
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 147/610 (24%), Positives = 259/610 (42%), Gaps = 78/610 (12%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL++F+ +  +  F H   T+  MIE L    +++  + +L  M  +G+   ED+F  +I
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            SY + G  ++++K F  M+   V+ +VK Y+ +   +L   R+ M    ++ M  +G+E
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT-------------------- 198
           P   TYN++L     + +++ A +   +M S+G   D V+                    
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238

Query: 199 ----------YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT------------ 236
                     YN +ING  +    +EA +L  EM  K I+P VISYTT            
Sbjct: 239 AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVE 298

Query: 237 -----------------------MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
                                  +IKG+     + +AL  +D M    V PN V Y AL+
Sbjct: 299 LSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC    + +   V  +M      P   + +  L+    K+G L+ A++V   MI    
Sbjct: 359 HGLCSKRSLGDAVSVFNQMEINGCCPNVRT-YSALIDGYAKAGDLDGASEVWNWMITHGC 417

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  +++  C+  M+++A  L++ +  +     P +T+     ++N  I+ LC +
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENC---PPNTV-----TFNTFIKGLCGS 469

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+   A   F Q+   G   +   +N L+    K+     AF +VK M  RG+  +   Y
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTY 529

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +I  Y   G   +A   L  M+  G  P +     V+++  + G+V  A ++M  +  
Sbjct: 530 NTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSA 589

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
                ++     ++  +     VEEA+  +  M+  G  PN   ++ L+  L        
Sbjct: 590 GKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSG 649

Query: 570 AVKLLDFCLG 579
           AV+ LD  LG
Sbjct: 650 AVQFLDAVLG 659



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 122/513 (23%), Positives = 217/513 (42%), Gaps = 21/513 (4%)

Query: 144 MAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
           +A  YF  +  S+  + T  TY +M+       +++      + MK  GIS     + ++
Sbjct: 58  LALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISV 117

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  Y R    ++A K F  M++  ++PTV  Y  ++   +   R      I+  MK   +
Sbjct: 118 IGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGM 177

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +PN  TY  LL  LC   ++    K+L EM  +   P D   +  L+   CK G +  A 
Sbjct: 178 EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDP-DEVSYTTLISSLCKLGKVKEAR 236

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           + L      S+P     Y  LI   CK   ++ A +LLD+++ K I        D    S
Sbjct: 237 E-LAMSFTPSVPV----YNALINGVCKEYTFEEAFQLLDEMMNKGI--------DPNVIS 283

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  +I  L   G    +     ++  +G    +  F +LI+G   +G    A +    M 
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           R GV  +  AY  L+     K    DA +  + M  +G  P    + ++++   + G + 
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            AS V   M+  G   N+     +++ L       +A   I+ M      PN   F++ +
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
             L   G+   A+K+ D      C  +  +Y ++LD+LL   +   A+ ++  +  +G  
Sbjct: 464 KGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIE 523

Query: 619 TDWKSSDKLIAGLNQEGNTKQA-DILSRM-IRG 649
            +  + + +I G    G   +A ++L +M +RG
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRG 556



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 5/280 (1%)

Query: 25  LVYNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN L HG    ++   A+  F  +E  G   + R T+  +I+   + G L+ A  +  
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR-TYSALIDGYAKAGDLDGASEVWN 410

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G   +   +  +++   +  +  ++  + + M+      +  +++   K +   G
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A + F++M + G  P   TYN +L       +   A    +DM+ RGI L++VTYN
Sbjct: 471 RVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYN 530

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+I GY     + EA +L  +M  +  +P  I+   +I  Y    + + A+++ D + + 
Sbjct: 531 TIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAG 590

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              P+ + YT+L+ G+C    + E    LR M+   I P 
Sbjct: 591 KWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPN 630



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/174 (19%), Positives = 84/174 (48%), Gaps = 1/174 (0%)

Query: 30  LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
           L G+   + A++ F  +  +G F  +  T+ ++++ L +  +   A  ++ DM  +G++ 
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCF-PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIEL 524

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           +   +  +I  Y   G++ E++++   M   G +    + + +     ++G+  +A +  
Sbjct: 525 NLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLM 584

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           +++ +    P    Y  ++ G    + +E AI +   M S GIS +V T+N ++
Sbjct: 585 DRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L  A  +L  M  +G + D     ++I++Y K+G V  ++++ D +        + +Y
Sbjct: 540 GMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAY 599

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            +L   I        A  Y  +MLSEGI P   T+NV++   F ++    A++F + +  
Sbjct: 600 TSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLG 659

Query: 190 RG 191
            G
Sbjct: 660 SG 661


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/607 (22%), Positives = 275/607 (45%), Gaps = 19/607 (3%)

Query: 40  LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIE 99
           L+ F  V     + H  + +   I  LG +GK      +L+ M ++G+ + E +F ++++
Sbjct: 96  LEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMK 155

Query: 100 SYGKKGIVQESVKIFDIMKQLGV-ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            YGK G   +++++   M+ + + E + KSYD + ++++      +A   F  MLS+G+ 
Sbjct: 156 HYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVS 215

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT  T+ +++    +  ++++A     DM   G   + + Y T+I+  ++  ++ EA KL
Sbjct: 216 PTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKL 275

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM      P V ++  +I G   V +  DA ++ D M      P+ +TY  LL GLC 
Sbjct: 276 LEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCR 335

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL-KAMIRLSIPTEA 337
            GK+ E +K+L +     IP  +N++   L+     SG L  A   L + MI      + 
Sbjct: 336 IGKLNEARKILIK-----IPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDI 390

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y IL+   CK      A  L++++  +          +    +Y  ++  LC  G   
Sbjct: 391 FTYNILMHGLCKEGSLSFARDLVNEMSRR--------GCEPNVITYAILVNGLCKAGLLE 442

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A +   ++  +G+ ++ V +N LI    ++     A  ++  M  +G   D   Y  LI
Sbjct: 443 EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
               +     +A     +M+ DG    +  + +++ +L   G  Q A  ++  M+ +G  
Sbjct: 503 YGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCT 562

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKL 573
            +      +++A    G++E+ L   + M+  G      + + +++ L + GK   A + 
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
           L   + R  + D+ +Y  VL+ L   G+   A ++  ++  +G   D  + +  I+   +
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682

Query: 634 EGNTKQA 640
           EG    A
Sbjct: 683 EGMVNDA 689



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/490 (23%), Positives = 210/490 (42%), Gaps = 15/490 (3%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L    +++ A  +L DM K G   +  +++ LI +  +K  V E++K+ + M  +G    
Sbjct: 228 LCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPD 287

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V++++ +   + +  +   A +  ++ML  G  P   TY  +L G     KL  A +   
Sbjct: 288 VQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI 347

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE-MKEKNIEPTVISYTTMIKGYVAV 244
            +     ++     NT+INGY    ++ EA+    E M     +P + +Y  ++ G    
Sbjct: 348 KIPCPNNAI----LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKE 403

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
                A  + +EM     +PN +TY  L+ GLC AG + E   VL EM  R +   ++ +
Sbjct: 404 GSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI-NSVI 462

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+   C+   ++ A ++L  M       +   Y  LI   CK +  D A +L   ++
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRG 423
               +            +YN +I  L   G   KA      ++ +G  LD + +N LI+ 
Sbjct: 523 LDGAV--------ANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K GN +   E+ + M   G+  D  +   +I    + G+  +A   L   I  G  P 
Sbjct: 575 FCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPD 634

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + SV+  L + GR++ A  +   +  +GV+ +       +      G V +A     
Sbjct: 635 IVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFY 694

Query: 544 LMMQSGSVPN 553
             +++G VP+
Sbjct: 695 RGIENGFVPS 704



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 147/318 (46%), Gaps = 1/318 (0%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T+  ++  L + G L+ AR ++ +M ++G + +   + +L+    K G+++E+ 
Sbjct: 386 FQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAG 445

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            +   M   G+  +   Y+ L   + R+ +  +A    ++M ++G +P   TYN +++G 
Sbjct: 446 LVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGL 505

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               +++ A R F +M   G   + VTYNT+I+   R     +A  L  +M  +      
Sbjct: 506 CKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDK 565

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I+Y  +IK +  V   +  L ++++M    +  + ++   ++ GLC  GK+    + LR+
Sbjct: 566 ITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRD 625

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
            + R   P D   +  +L   CK G +  A ++   +    +  +A  Y   I   CK  
Sbjct: 626 AINRGFVP-DIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEG 684

Query: 352 MYDRAIKLLDKLVEKEII 369
           M + A     + +E   +
Sbjct: 685 MVNDACSFFYRGIENGFV 702



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 9/265 (3%)

Query: 46  VERAGLFNHDRET---------HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           +E AGL  H+            +  +I  L R  K++ A  +L +M  KG + D   +  
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI    K   + E+ ++F  M   G   +  +Y+ L   +LRRG +  A    N ML  G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
               + TYN ++  F     +E  +  +E M   G+  D ++ N MING  +  K+D A 
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +   +   +   P +++Y +++ G   V R  +AL +FD ++   V+P+A TY   +   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 277 CDAGKMVEVQKVLREMVERYIPPKD 301
           C  G + +        +E    P +
Sbjct: 681 CKEGMVNDACSFFYRGIENGFVPSN 705



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 93/200 (46%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L R G    A  ++ DM  +G   D+  +  LI+++ K G +++ +++++ M
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+     S + +   + + G+   A  +    ++ G  P   TYN +L G     ++
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+  F+ ++  G+  D  TYNT I+   +   +++A   F    E    P+ +++  +
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVL 711

Query: 238 IKGYVAVERADDALRIFDEM 257
           +   +     ++   + DE+
Sbjct: 712 VYTLLKQSNQENNFFVLDEL 731


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/607 (22%), Positives = 275/607 (45%), Gaps = 19/607 (3%)

Query: 40  LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIE 99
           L+ F  V     + H  + +   I  LG +GK      +L+ M ++G+ + E +F ++++
Sbjct: 96  LEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMK 155

Query: 100 SYGKKGIVQESVKIFDIMKQLGV-ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            YGK G   +++++   M+ + + E + KSYD + ++++      +A   F  MLS+G+ 
Sbjct: 156 HYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVS 215

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT  T+ +++    +  ++++A     DM   G   + + Y T+I+  ++  ++ EA KL
Sbjct: 216 PTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKL 275

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM      P V ++  +I G   V +  DA ++ D M      P+ +TY  LL GLC 
Sbjct: 276 LEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCR 335

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL-KAMIRLSIPTEA 337
            GK+ E +K+L +     IP  +N++   L+     SG L  A   L + MI      + 
Sbjct: 336 IGKLNEARKILIK-----IPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDI 390

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y IL+   CK      A  L++++  +          +    +Y  ++  LC  G   
Sbjct: 391 FTYNILMHGLCKEGSLSFARDLVNEMSRR--------GCEPNVITYAILVNGLCKAGLLE 442

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A +   ++  +G+ ++ V +N LI    ++     A  ++  M  +G   D   Y  LI
Sbjct: 443 EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
               +     +A     +M+ DG    +  + +++ +L   G  Q A  ++  M+ +G  
Sbjct: 503 YGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCT 562

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKL 573
            +      +++A    G++E+ L   + M+  G      + + +++ L + GK   A + 
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
           L   + R  + D+ +Y  VL+ L   G+   A ++  ++  +G   D  + +  I+   +
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682

Query: 634 EGNTKQA 640
           EG    A
Sbjct: 683 EGMVNDA 689



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 203/486 (41%), Gaps = 39/486 (8%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L    +++ A  +L DM K G   +  +++ LI +  +K  V E++K+ + M  +G    
Sbjct: 228 LCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPD 287

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V++++ +   + +  +   A +  ++ML  G  P   TY  +L G     KL  A +   
Sbjct: 288 VQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI 347

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE-MKEKNIEPTVISYTTMIKGYVAV 244
            +     ++     NT+INGY    ++ EA+    E M     +P + +Y  ++ G    
Sbjct: 348 KIPCPNNAI----LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKE 403

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
                A  + +EM     +PN +TY  L+ GLC AG + E   VL EM  R +   ++ +
Sbjct: 404 GSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLT-INSVI 462

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL----- 359
           +  L+   C+   ++ A ++L  M       +   Y  LI   CK +  D A +L     
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522

Query: 360 LDKLVEKEI------------------------ILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           LD  V   +                        +L    TLD    +YN +I+  C  G 
Sbjct: 523 LDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD--KITYNGLIKAFCKVGN 580

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             K    + Q++  G+  D ++ N +I G  K G  D+AFE ++    RG   D   Y  
Sbjct: 581 IEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNS 640

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           ++    + G   +A    D +  +G  P +  + + +    ++G V  A       +E G
Sbjct: 641 VLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENG 700

Query: 515 -VKENL 519
            V  NL
Sbjct: 701 FVPSNL 706



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/387 (21%), Positives = 169/387 (43%), Gaps = 45/387 (11%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T+  ++  L + G L+ AR ++ +M ++G + +   + +L+    K G+++E+ 
Sbjct: 386 FQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAG 445

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            +   M   G+  +   Y+ L   + R+ +  +A    ++M ++G +P   TYN +++G 
Sbjct: 446 LVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGL 505

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               +++ A R F +M   G   + VTYNT+I+   R     +A  L  +M  +      
Sbjct: 506 CKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDK 565

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I+Y  +IK +  V   +  L ++++M    +  + ++   ++ GLC  GK+    + LR+
Sbjct: 566 ITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRD 625

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
            + R   P                       D++              Y  ++   CK  
Sbjct: 626 AINRGFVP-----------------------DIVT-------------YNSVLNGLCKVG 649

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG- 410
               A+ L D+L  + +  RP      +A +YN  I   C  G    A +FF + ++ G 
Sbjct: 650 RIKEALNLFDRLQVEGV--RP------DAFTYNTFISWQCKEGMVNDACLFFYRGIENGF 701

Query: 411 VLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           V   + +N L+    K+ N ++ F ++
Sbjct: 702 VPSNLTWNVLVYTLLKQSNQENNFFVL 728



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 93/200 (46%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L R G    A  ++ DM  +G   D+  +  LI+++ K G +++ +++++ M
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+     S + +   + + G+   A  +    ++ G  P   TYN +L G     ++
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+  F+ ++  G+  D  TYNT I+   +   +++A   F    E    P+ +++  +
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVL 711

Query: 238 IKGYVAVERADDALRIFDEM 257
           +   +     ++   + DE+
Sbjct: 712 VYTLLKQSNQENNFFVLDEL 731


>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
 gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/577 (23%), Positives = 266/577 (46%), Gaps = 43/577 (7%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           H  + +++   K++  ALQ F W  +   F H + T+  +I  L    + +  + +L +M
Sbjct: 15  HERIVHLILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEM 74

Query: 83  PKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           PK  G+  DE +F  +I   G+  ++++ +K+ D++ + G   S+K ++++  ++++   
Sbjct: 75  PKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVKEDI 134

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            +  K Y  KM+  GI+   +TY +++ G  L+ ++    +  + +KSRG+  +VV YNT
Sbjct: 135 DLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNT 194

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++      K+  A  L  E+KE    P  +++  +I GY   +    AL + ++  S  
Sbjct: 195 LLHALCNNGKVGRARSLMNEIKE----PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLG 250

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             P+ VT T ++  LC+ G++ E  ++L E VE      D      L+   CK G +   
Sbjct: 251 FVPDVVTVTKVVEILCNVGRVTEAVEIL-ERVESKGGVVDVVAHNTLIKGFCKFGKVKLG 309

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL---------------DKLVEK 366
             +LK M R      A  Y  LI  FC++ M + A+ +                D L++ 
Sbjct: 310 HGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKG 369

Query: 367 --------------EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
                         E++   +       S YN ++  L       +A  F   LMK   L
Sbjct: 370 LFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEF---LMKMENL 426

Query: 413 DPVAFNNLIR--GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            P A +  +R  G  +EG    A  +   M   G    A  Y CLI  + ++G   +A  
Sbjct: 427 FPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALE 486

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            ++ M+  G+ P +S F +++      G+  +A ++++ MV +G   +    + +++AL 
Sbjct: 487 LMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALC 546

Query: 531 MRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEK 564
            +   ++A   +  M+++G  P++   +SL   LS++
Sbjct: 547 RKKSFQKAASLLLQMVENGITPDYLIWNSLFHCLSQQ 583



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 113/529 (21%), Positives = 220/529 (41%), Gaps = 89/529 (16%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
           S  +Y AL   +L   R+   +   ++M  S G+ P    +  ++ G   +  +   I+ 
Sbjct: 47  SQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKV 106

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF-AEMKEKNIEPTVISYTTMIKGYV 242
            + +   G +  +  +N++++   + + +D A K +  +M    I+    +Y  ++KG  
Sbjct: 107 LDLVTRYGKNPSLKIFNSILDVLVK-EDIDLARKFYRKKMMGAGIQGDDYTYGILMKGLC 165

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              R  +  ++   +KS  +KPN V Y  LL  LC+ GK+   + ++ E+ E    P D 
Sbjct: 166 LTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE----PNDV 221

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           +                                    + +LI  +CK + + +A+ LL+K
Sbjct: 222 T------------------------------------FNVLICGYCKEDNFVQALVLLEK 245

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLI 421
                 +         +  +   +++ LC+ G+  +A EI  R   K GV+D VA N LI
Sbjct: 246 SFSLGFV--------PDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLI 297

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
           +G  K G       ++K M R+G   +AD Y  LI  +   G    A    + M  DG +
Sbjct: 298 KGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGIN 357

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVE-KGV-KENLDLVAKILEALLMRGHVEEAL 539
                F ++++ LF  GR +   ++++ M E +GV   ++     +L  L  +  + EAL
Sbjct: 358 CNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEAL 417

Query: 540 GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
              + +M+       ++L     ++     ++++L FC                      
Sbjct: 418 ---EFLMK------MENLFPRAVDR-----SLRILGFC--------------------EE 443

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           G    A  +  ++  +GG+      D LI G  QEG  ++A ++++ M+
Sbjct: 444 GAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMV 492


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 260/529 (49%), Gaps = 30/529 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +  + + A  +  +M  +G++ +E  + +LI +  K+G++++++ +FD M+  G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +V  Y++L     ++G    A+   + M+ EG+ PT  +Y+ ++ G   +  L + +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M  RGI+ +  T+  +ING+ + KKMDEA +LF +M + N+ P  +++  MI+GY
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             V     A +++D+M    +KP+  TY +L+ GLC    + +  + + ++   Y    +
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI---------ENFCKA-- 350
            S+   L G   + G       +   M    +  +   + I++         E  C    
Sbjct: 584 FSLTALLYGFF-REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 642

Query: 351 EMYDRAIK--------LLDKLVEKEIILRPQSTLD-MEASSYNP-------MIQHLCHNG 394
           EM ++ +K        ++D L ++E +++  +  D M    Y+P       +I +LC +G
Sbjct: 643 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG 702

Query: 395 QTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
             G AE+  ++++   VL +   +N  +   + EG+ + A ++   M  +G      ++ 
Sbjct: 703 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFN 761

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI+   + G+  +A   +  + E G SP    + +++  L + G +  A  +   M+ K
Sbjct: 762 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
           G+K ++      +    + G  ++ALG    M++SG  PN+D+  ++LS
Sbjct: 822 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 265/598 (44%), Gaps = 13/598 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++    R+ +L  A  I  DM + G    E     +I+   KK +V+E+  + 
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 326

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             +  LG+  +V +Y+AL   + +  R+  A R F +M   G+EP   TY +++      
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A+  F+ M+ +GI + V  YN++INGY +   +D A  L + M ++ + PT  SY
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I G          + +  EM    +  N  T+TAL+ G C   KM E  ++  +M++
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P + + F  ++   C  G++  A  +   M+ + +  +   Y  LI   C      
Sbjct: 507 SNVIPNEVT-FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
           +A + +  L     +L           S   ++      G+  +    + ++  +GV LD
Sbjct: 566 KANEFVADLENSYAVL--------NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V+F  ++    K+ + + +  + + M  +GV  D   Y C+I++  ++     A    D
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+ DG+SP +     ++ +L + G + +A  + K M+   V  N       L+     G
Sbjct: 678 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737

Query: 534 HVEEALGRIDLMMQS--GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
            +E+A      M+Q    S+ +F+ L+  L + GK   A+ L+          D  SY  
Sbjct: 738 DMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 797

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           ++  L   G    A+ +  +++ KG   D  + +  I   N  G + +A  I + MIR
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 855



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 139/641 (21%), Positives = 252/641 (39%), Gaps = 68/641 (10%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L ++ +   AR +   M + GV  DE ++   I +Y +   +  +  +   M+  GV+ S
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 232

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
              Y+ L   + +  R   A    N M++ G+     TY  +++GF    +LE A+R   
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITH 292

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           DM   G        + MI+   + + ++EA  L  ++ +  + P V +Y  +I      E
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNE 352

Query: 246 RADDALRIFDEMKSFDVKPNAVT-----------------------------------YT 270
           R DDA R+F EM    ++PN VT                                   Y 
Sbjct: 353 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYN 412

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           +L+ G C  G +   + +L  MV+  + P   S +  L+   C++G L++  ++ + M  
Sbjct: 413 SLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS-YSPLIAGLCRNGDLSSCMELHREMAE 471

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP------------------ 372
             I      +  LI  FCK +  D A +L DK+++  +I                     
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531

Query: 373 ---------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPVAFNNLIR 422
                    +  L  +  +Y  +I  LC      KA  F   L     VL+  +   L+ 
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  +EG     + +   M  RGV  D  ++  ++ + L++ +   +      M E G  P
Sbjct: 592 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               +  ++++L ++  +  A      MV  G   N      ++  L   G++  A    
Sbjct: 652 DDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLC 711

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             M+    +PN   ++  L   + +G    A K L   + +  +  + S+  ++  L  A
Sbjct: 712 KEMLAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKA 770

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           GK   A  ++ KI E G   D  S   +I  L + G+  +A
Sbjct: 771 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKA 811



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 135/607 (22%), Positives = 249/607 (41%), Gaps = 90/607 (14%)

Query: 125 SVKSYDA---LFKLILRRGRYMMAKRYFNKML---------------------------- 153
           +V  Y A   LF L+  R ++ +A+  F+KML                            
Sbjct: 160 TVNQYTASQILFSLVKIR-QFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 218

Query: 154 -------SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                  SEG++ +   YNV+++G   +++++ A+     M + G++ D VTY T++ G+
Sbjct: 219 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF 278

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R ++++ A ++  +M      P+  + + MI      E  ++A  +  ++    + PN 
Sbjct: 279 CRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 338

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
             Y AL+  LC   +  +  ++ +EM  R + P + + +  L+   CK G +  A  +  
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVT-YAILIHALCKRGMIEDALCLFD 397

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M    I      Y  LI  +CK    DRA  LL  +V++         L   A+SY+P+
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE--------GLTPTAASYSPL 449

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC NG         R++ ++G+  +   F  LI G  K+   D A  +   M    V
Sbjct: 450 IAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL----------- 494
             +   +  +IE Y   G    A    D M+E G  P +  +RS++  L           
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569

Query: 495 ------------------------FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
                                   F +GR      +   M  +GVK +L     I+ A L
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            +   E++      M + G  P+   +  ++  LS++   I A+   D  +      +  
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK-SSDKLIAGLNQEGNTKQA-DILSR 645
           ++  +++ L  +G  L +  +L K M  G V   K + +  +     EG+ ++A D+ S 
Sbjct: 690 THTVLINNLCKSG-YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 748

Query: 646 MIRGEMS 652
           M++G ++
Sbjct: 749 MLQGHLA 755



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/423 (22%), Positives = 181/423 (42%), Gaps = 34/423 (8%)

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS GI   ++T + +L+      +   A   F+ M   G+ LD   Y   I  Y   + +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D A  L   M+ + ++ + + Y  ++ G     R  +A+ + + M +  V  + VTY  L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 273 LPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFM-----------KLLGVQCKSGHLNA 320
           + G C   ++    ++  +M+   ++P + N  FM           +   + CK G L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
             +V               Y  LI+  CK E +D A +L  ++  +   L P        
Sbjct: 335 VPNVFA-------------YNALIDKLCKNERFDDADRLFKEMAGRG--LEPNEV----- 374

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y  +I  LC  G    A   F ++  KG+   V  +N+LI G+ K+G+ D A  ++  
Sbjct: 375 -TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M + G+   A +Y  LI    R G+ +        M E G +  +  F +++    +D +
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 493

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
           +  A+R+   M++  V  N      ++E   + G++ +A    D M++ G  P+  +  S
Sbjct: 494 MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 553

Query: 560 VLS 562
           ++S
Sbjct: 554 LIS 556



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 8/240 (3%)

Query: 77  CILL-DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
           C+L  +M ++GV+ D+  +  +I++  K+  + +++  +D M   G   +  ++  L   
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 697

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS---RGI 192
           + + G    A+    +ML+  + P + TYN  L  F     +E A    +D+ S   +G 
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA----KDLHSAMLQGH 753

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
              +V++N +I G  +  K+ EA  L +++ E    P  ISY+T+I     +   + A  
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFE 813

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +++EM    +KP+ V Y   +      G+  +   +   M+   + P  ++    L G+ 
Sbjct: 814 LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873



 Score = 38.9 bits (89), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 31/147 (21%), Positives = 64/147 (43%), Gaps = 5/147 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L + GK+  A  ++  + + G   D   +  +I    K G + ++ ++++ M   G
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++  V +Y+   +     G    A   +  M+  G++P   TY  +L G  +SL L    
Sbjct: 823 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG--ISLMLHYDF 880

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNR 208
             F   K     + +  Y  M + +N+
Sbjct: 881 SCFRGTKQY---IQISVYELMDSTHNK 904


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 144/635 (22%), Positives = 286/635 (45%), Gaps = 46/635 (7%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           +++ F+W      + H  + +  +I+ LG  G+      +L+ M ++G+ + E +F +++
Sbjct: 112 SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIM 171

Query: 99  ESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           + YG+ G+  ++ ++  D+      E + +SY+ +  ++L      +    F +MLS+GI
Sbjct: 172 KHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGI 231

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
            PT +T+ V++    L  ++++A    +DM   G   + + Y T+I+  ++  +++E  K
Sbjct: 232 SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLK 291

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           L  EM      P V ++   I G   + R  +A ++ D M      PN+ TY  L+ GLC
Sbjct: 292 LLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLC 351

Query: 278 DAGKMVEVQKVLRE-----------MVERYIP---------------------PKDNSVF 305
             GK+ E + +L +           ++  Y+                      P   +  
Sbjct: 352 RMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 411

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             +LG+ CK G+L +A +++  M           Y ILI+ FCK    + A  +LD++  
Sbjct: 412 TLILGL-CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
           K         L + A  YN +I  LC + +   A   F  +  KG   D   FN+LI G 
Sbjct: 471 K--------GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 522

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K    + A  + + M   GV  +   Y  LI ++LR+G   +A   ++ M+  G     
Sbjct: 523 CKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 582

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             +  ++++L   G ++    + + M+ KG+  N      ++  L   G+++ AL  +  
Sbjct: 583 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 642

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M+  G  P+   ++SL++ L + G+   A+ L D         D  +Y  ++      G 
Sbjct: 643 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 702

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
             +A+ +L + ++ G + +  +   L++   +EG+
Sbjct: 703 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 216/452 (47%), Gaps = 27/452 (5%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGL--FNHDRETHLKMIEILGRVGKLNHARCIL 79
           D N   + +HG        +  + V+R  L  F  +  T+  ++  L R+GK++ AR +L
Sbjct: 304 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 363

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILR 138
             +P   V     +F  LI  Y  +G + E+  +  + M  +G    + +Y+ L   + +
Sbjct: 364 NKVPNPNVV----LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 419

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           +G  + A+   N+M  +G EP   TY +++  F    +LE A    ++M  +G++L+ V 
Sbjct: 420 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 479

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN +I+   + +K+ +A  +F +M  K  +P + ++ ++I G   V + ++AL ++ +M 
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
              V  N +TY  L+      G M E  K++ +M+ R   P D+  +  L+   C++G++
Sbjct: 540 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC-PLDDITYNGLIKALCRAGNI 598

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
                + + M+   +        ILI   C+      A++ L  ++ +         L  
Sbjct: 599 EKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHR--------GLTP 650

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
           +  +YN +I  LC  G+  +A   F +L  +G+  D + +N LI  H KEG  D A    
Sbjct: 651 DIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA---- 706

Query: 438 KIMGRRGV-----PRDADAYICLIESYLRKGE 464
            ++  RGV     P +   YI L+ +++++G+
Sbjct: 707 HLLLSRGVDSGFIPNEVTWYI-LVSNFIKEGD 737



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 20/239 (8%)

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS---VMESLFE 496
           M + G+      +I +++ Y R G P  A   L  M   G       FRS   V++ L  
Sbjct: 155 MKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM--RGVYSCEPTFRSYNVVLDVLLA 212

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
               +    V   M+ KG+   +     +++AL +   V+ A   +  M + G VPN   
Sbjct: 213 GNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIV 272

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           + +L+  LS+ G+    +KLL+  L   CI D+ ++   +  L    +   A  ++ +++
Sbjct: 273 YQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRML 332

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADIL------------SRMIRGEMSRGSQKEKK 660
            +G   +  +   L+ GL + G   +A +L            + +I G +SRG   E K
Sbjct: 333 LRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAK 391


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/609 (24%), Positives = 280/609 (45%), Gaps = 20/609 (3%)

Query: 30  LHGAKNSEHALQFFRWVERAGLFN--HDRETHLKMIEILGRVGKLNHARCILLDMPKKGV 87
           L    +++ +  +F+ V  AG  N  H  ET   M+E L   GKL     +   M K+ +
Sbjct: 92  LKSFPDTDSSFSYFKSV--AGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRII 149

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
           + D + +  + +S   KG ++++      M++ G   +  SY+ L  L+L+      A  
Sbjct: 150 KRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAME 209

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
            + +M+ EG  P+  TY+ ++ G      +++ +   ++M++ G+  +V T+   I    
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           R  K++EA ++   M ++   P V++YT +I       + D A  +F++MK+   KP+ V
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329

Query: 268 TYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           TY  LL    D   +  V++   EM  + ++P  D   F  L+   CK+G+   A D L 
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP--DVVTFTILVDALCKAGNFGEAFDTLD 387

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M    I      Y  LI    +    D A++L   +  + + ++P       A +Y   
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM--ESLGVKPT------AYTYIVF 439

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I +   +G +  A   F ++  KG+  + VA N  +   +K G    A +I   +   G+
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D+  Y  +++ Y + GE  +A   L  M+E+G  P   +  S++ +L++  RV  A +
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           +   M E  +K  +     +L  L   G ++EA+   + M+Q G  PN   F++L   L 
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           +  +   A+K+L   +   C+ D+ +Y  ++  L+  G+   A    F  M+K    D+ 
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC-FFHQMKKLVYPDFV 678

Query: 623 SSDKLIAGL 631
           +   L+ G+
Sbjct: 679 TLCTLLPGV 687



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 165/690 (23%), Positives = 282/690 (40%), Gaps = 77/690 (11%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + ++ + L  A+  + A + F  + + G    DR T++ +++       L+  +    +M
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K G   D   F +L+++  K G   E+    D+M+  G+  ++ +Y+ L   +LR  R 
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS--------- 193
             A   F  M S G++PT +TY V +  +  S    +A+  FE MK++GI+         
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474

Query: 194 --------------------------LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
                                      D VTYN M+  Y++  ++DEA KL +EM E   
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
           EP VI   ++I      +R D+A ++F  MK   +KP  VTY  LL GL   GK+ E  +
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +   MV++  PP +   F  L    CK+  +  A  +L  M+ +    +   Y  +I   
Sbjct: 595 LFEGMVQKGCPP-NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653

Query: 348 CKAEMYDRAIKL---LDKLVEKEII----LRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
            K      A+     + KLV  + +    L P             +I +  +N     A 
Sbjct: 654 VKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN 713

Query: 401 IFFRQLM-----KKGVLDPVAFNN-----------------LIRGHSKEGNPDSA---FE 435
           +F+  L+     + G+ + V+F+                  +IR   K  N   A   FE
Sbjct: 714 LFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFE 773

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
             K     GV      Y  LI   L       A+     +   G  P  + +  ++++  
Sbjct: 774 --KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG-RIDLMMQ---SGSV 551
           + G++     + K M     + N      ++  L+  G+V++AL    DLM     S + 
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             +  L+  LS+ G+   A +L +  L   C  + A Y  +++    AG+  +A   LFK
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA-DAACALFK 950

Query: 612 IMEKGGV-TDWKSSDKLIAGLNQEGNTKQA 640
            M K GV  D K+   L+  L   G   + 
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 142/635 (22%), Positives = 274/635 (43%), Gaps = 61/635 (9%)

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            L + G+   A+ I   +   G+  D   + ++++ Y K G + E++K+   M + G E  
Sbjct: 478  LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
            V   ++L   + +  R   A + F +M    ++PT  TYN +L G   + K++ AI  FE
Sbjct: 538  VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
             M  +G   + +T+NT+ +   +  ++  A K+  +M +    P V +Y T+I G V   
Sbjct: 598  GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657

Query: 246  RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL---------------- 289
            +  +A+  F +MK   V P+ VT   LLPG+  A  + +  K++                
Sbjct: 658  QVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFW 716

Query: 290  --------------------REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
                                  +V   I    +S+ + ++   CK  +++ A  + +   
Sbjct: 717  EDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFT 776

Query: 330  R-LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM-EASSYNPMI 387
            + L +  +   Y +LI    +A+M +         + +++ L+ +ST  + + ++YN ++
Sbjct: 777  KDLGVQPKLPTYNLLIGGLLEADMIE---------IAQDVFLQVKSTGCIPDVATYNFLL 827

Query: 388  QHLCHNGQTGKAEIFFRQLMKKGV----LDPVAFNNLIRGHSKEGNPDSAFEIV-KIMGR 442
                  G++GK +  F    +        + +  N +I G  K GN D A ++   +M  
Sbjct: 828  DAY---GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884

Query: 443  RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            R     A  Y  LI+   + G   +AK   + M++ G  P  +++  ++    + G    
Sbjct: 885  RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944

Query: 503  ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
            A  + K MV++GV+ +L   + +++ L M G V+E L     + +SG  P+      +++
Sbjct: 945  ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004

Query: 563  EKGKTI----AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
              GK+     A V   +    R    DL +Y  ++  L  AG    A  I  +I   G  
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064

Query: 619  TDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMS 652
             +  + + LI G +  G  + A  +   M+ G  S
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1099



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 155/342 (45%), Gaps = 38/342 (11%)

Query: 145  AKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A+  F K   + G++P   TYN+++ G   +  +E A   F  +KS G   DV TYN ++
Sbjct: 768  ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827

Query: 204  NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF-DEMKSFDV 262
            + Y +  K+DE  +L+ EM     E   I++  +I G V     DDAL ++ D M   D 
Sbjct: 828  DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887

Query: 263  KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             P A TY  L+ GL  +G++ E +++   M++    P + +++  L+    K+G  +AA 
Sbjct: 888  SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP-NCAIYNILINGFGKAGEADAAC 946

Query: 323  DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL------ 376
             + K M++  +  +   Y +L++  C     D  +    +L  KE  L P          
Sbjct: 947  ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL--KESGLNPDVVCYNLIIN 1004

Query: 377  ----------------DMEAS--------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
                            +M+ S        +YN +I +L   G   +A   + ++ + G L
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG-L 1063

Query: 413  DP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +P    FN LIRG+S  G P+ A+ + + M   G   +   Y
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 1/251 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            HN+V + L  A N + AL  +  +     F+    T+  +I+ L + G+L  A+ +   M
Sbjct: 858  HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G + +  ++ +LI  +GK G    +  +F  M + GV   +K+Y  L   +   GR 
Sbjct: 918  LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK-SRGISLDVVTYNT 201
                 YF ++   G+ P    YN+++ G   S +LE A+  F +MK SRGI+ D+ TYN+
Sbjct: 978  DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037

Query: 202  MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            +I        ++EA K++ E++   +EP V ++  +I+GY    + + A  ++  M +  
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097

Query: 262  VKPNAVTYTAL 272
              PN  TY  L
Sbjct: 1098 FSPNTGTYEQL 1108



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 150/339 (44%), Gaps = 15/339 (4%)

Query: 15   RALVPQFDHNL-------VYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
            R L  +F  +L        YN+L G    A   E A   F  V+  G    D  T+  ++
Sbjct: 769  RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI-PDVATYNFLL 827

Query: 64   EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGV 122
            +  G+ GK++    +  +M     + +     ++I    K G V +++ ++ D+M     
Sbjct: 828  DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887

Query: 123  ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
              +  +Y  L   + + GR   AK+ F  ML  G  P    YN+++ GF  + + + A  
Sbjct: 888  SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947

Query: 183  FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
             F+ M   G+  D+ TY+ +++      ++DE    F E+KE  + P V+ Y  +I G  
Sbjct: 948  LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007

Query: 243  AVERADDALRIFDEMK-SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R ++AL +F+EMK S  + P+  TY +L+  L  AG + E  K+  E+    + P +
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP-N 1066

Query: 302  NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
               F  L+     SG    A  V + M+        G Y
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 93/183 (50%), Gaps = 2/183 (1%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N++ N    A  ++ A   F+ + + G+   D +T+  +++ L  VG+++       ++
Sbjct: 929  YNILINGFGKAGEADAACALFKRMVKEGV-RPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK-QLGVERSVKSYDALFKLILRRGR 141
             + G+  D   + ++I   GK   ++E++ +F+ MK   G+   + +Y++L   +   G 
Sbjct: 988  KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047

Query: 142  YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
               A + +N++   G+EP   T+N ++ G+ LS K E A   ++ M + G S +  TY  
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107

Query: 202  MIN 204
            + N
Sbjct: 1108 LPN 1110


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 162/665 (24%), Positives = 279/665 (41%), Gaps = 52/665 (7%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P  F +N++ + L  A  ++ A +    +   G+   D  T   +++ L + GK  
Sbjct: 4   RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV-TPDTVTFNSIMDGLCKAGKFE 62

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +L  M ++  +     +  LI    K+  V  +  + D     G    V +Y  L 
Sbjct: 63  RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + +RGR   A     +M   G  P   TYN ++ G   + K E A    E + S G  
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DVVTY  +++G  +  ++D+A K+   M ++   P+VI+YT +++G     R D+A  I
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F EM S D   +A+ Y +L+ G C + +  E QKV+  +  R  P  D  V+  L+   C
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGTPYID--VYNALMDGYC 298

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G L+   +V + M           Y I+++  CK    D A   L+ +     +  P 
Sbjct: 299 KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCV--P- 355

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDS 432
                +  SYN +I  L    +  +A     Q+++ G+  D V +N L+    KE   D 
Sbjct: 356 -----DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 410

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH-SPASSLFRSVM 491
           A  I+K M + GV  D   Y  LI    +     DA   +  M+ +G    A + + +++
Sbjct: 411 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTII 470

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQS 548
           + L ++G ++ A  +M  M   GV+ N       ++ L   G ++EA   L  +D +   
Sbjct: 471 DRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDE 530

Query: 549 GSVP---------------------------------NFDSLLSVLSEKGKTIAAVKLLD 575
            S                                    F+ L+   ++  +   A+ LL+
Sbjct: 531 VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLE 590

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             + R C   + +Y  V+  L    K   A+ +  ++  +G V    S   LI GL  +G
Sbjct: 591 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 650

Query: 636 NTKQA 640
             K+A
Sbjct: 651 RGKEA 655



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/569 (22%), Positives = 257/569 (45%), Gaps = 20/569 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M ++ V  D   + +LI+   K     ++ ++   M   GV     +++++   + + G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A      M      P+  TYN ++ G      ++ A    ++  S G   DVVTY+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           + +G  +  ++DEA +L  EM      P +++Y T+I G     + + A  + + + S  
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             P+ VTYT ++ GLC  G++ +  K++  M++R   P   + +  L+   C++G ++ A
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT-YTALMEGLCRTGRVDEA 239

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             + K M+      +A  Y  L+  +CK+     A K++D        +R    +D+   
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG-------IRGTPYIDV--- 289

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIM 440
            YN ++   C  G+  +    F  +  +G +  +  +N ++ G  K G  D AF  ++ M
Sbjct: 290 -YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 348

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G   D  +Y  +I+   +  +P +A+  LD MI+ G  P +  + ++M    ++ R 
Sbjct: 349 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 408

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV----PNFDS 556
             A  ++K+M++ GV  +      ++  L     + +A   +  M+++G V      +++
Sbjct: 409 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 468

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           ++  L ++G    A+ L+D   G     +  +Y   +D L   G+   A S+L    E  
Sbjct: 469 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL---SEMD 525

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            + D  S   +I GL +     +A  L+R
Sbjct: 526 TLRDEVSYTTVIIGLCKAEQLDRASKLAR 554



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 209/483 (43%), Gaps = 16/483 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++E L R G+++ A  I  +M  K    D   +  L+  Y K    +E+ K+ D +
Sbjct: 222 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 281

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +       +  Y+AL     + GR       F  M   G  P   TYN+++ G     K+
Sbjct: 282 RG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 338

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A  F E M S G   DVV+YN +I+G  +  K  EA ++  +M +  I P  ++Y T+
Sbjct: 339 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +  +   ER DDA+ I   M    V P+ VTY  L+ GL    ++ +  +++ EM+    
Sbjct: 399 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 458

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
                + +  ++   CK G L  A  ++  M    +      Y I I+  CK    D A 
Sbjct: 459 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 518

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGV-LDPV 415
            LL ++           TL  E  SY  +I  LC   Q  +A    R+++  KG+ +   
Sbjct: 519 SLLSEM----------DTLRDEV-SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 567

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            FN LI   +K    D A  ++++M +RG       Y  +I    +  +   A    D M
Sbjct: 568 TFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 627

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
              G   +S  +  ++  L   GR + A +V++ M     + +     K+  AL  +G  
Sbjct: 628 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRG 687

Query: 536 EEA 538
           EEA
Sbjct: 688 EEA 690



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 4/272 (1%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +I  LC   +T KA     +++ +GV  D V FN+++ G  K G  + A  ++ +M
Sbjct: 12  TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 71

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             R        Y  LI    ++     AKT +D  +  G  P    +  + + L + GR+
Sbjct: 72  AERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRI 131

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A  ++K M   G   NL     +++ L      E+A   ++ ++ SG VP+   +  +
Sbjct: 132 DEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTII 191

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  L ++G+   A+K+++  L R C   + +Y  +++ L   G+   A+ I  +++ K  
Sbjct: 192 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
             D  +   L+ G  +   TK+A  +   IRG
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRG 283


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 202/456 (44%), Gaps = 10/456 (2%)

Query: 40  LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIE 99
           + FF+W      +NH   ++  ++E+L + G+ +H      DM   G   +   +  L+ 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60

Query: 100 SYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
           S  +    +E+  +F  M   G   +V SY  L   + R  +   A    N+M+  G +P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
              TY  +L G     KL+ A+  F  M  RG   D V YN +I+G+++   M EA +LF
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
            EM EK   PTV +Y +++ G+           +F +M      PN  T+  LL G C  
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
           G MVE  ++  EM     PP D   +  L+   C  G  + A  +L+ MIR  +  +   
Sbjct: 241 GDMVEAHRLFLEMRSLGCPP-DVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y ILI+ + K+   D AIKL  ++        P+S L+ +A SY+ +I  LC  G+ G A
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEI--------PKSGLEPDAFSYSTIIDCLCRAGKVGAA 351

Query: 400 EIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
            + F+ ++  G   D      L+ G  +      + E+ + M +         Y  L+  
Sbjct: 352 FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
             +     D       + E G SP   + + ++E+L
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/450 (21%), Positives = 199/450 (44%), Gaps = 13/450 (2%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
            ++YN ++    +  + D     + +M      P   +Y  +++     +R ++A  +F 
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
            M +    PN  +Y+ L+ GLC   K+ E  ++L EM++    P +   +  LL   CK 
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP-NVVTYGSLLSGLCKM 135

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G L  A D+   M+    P +   Y +LI+ F K      A +L ++++EK  I      
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI------ 189

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
                 +YN ++      G+ G+ +  F+ ++++G +  +  FNNL+ G  K G+   A 
Sbjct: 190 --PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAH 247

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +   M   G P D  +Y  L+     KG+P +A+  L  MI  G  P    +  +++  
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF 554
            + G +  A ++   + + G++ +    + I++ L   G V  A      M+ +GS P+ 
Sbjct: 308 SKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDA 367

Query: 555 DSLLSV---LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++ +   L    +   + +L    +  +C+  +  Y  ++  L  A ++ +   I  +
Sbjct: 368 AVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHE 427

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           + E+G   D + S  ++  L +  + + A+
Sbjct: 428 LTERGFSPDVEISKVILETLRRSDDKEAAE 457



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 141/341 (41%), Gaps = 14/341 (4%)

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           LL V  KSG  +        M+          YG L+ + C+A+ ++ A  +   +  + 
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ- 81

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSK 426
                         SY+ +I  LC   +  +A     +++  G   + V + +L+ G  K
Sbjct: 82  -------GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G    A ++   M  RG P D   Y  LI+ + +KG+  +A    + M+E G  P    
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           + S++      G       + K M+ +G   N+     +L+     G + EA  R+ L M
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEA-HRLFLEM 253

Query: 547 QSGSVP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           +S   P    ++++L+  +  KGK   A +LL   +      D+ SY  ++D    +G  
Sbjct: 254 RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            +A  + ++I + G   D  S   +I  L + G    A ++
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVV 354



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 124/272 (45%), Gaps = 5/272 (1%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           SYN +++ L  +G+       +  ++  G V +   +  L+R   +    + A  + + M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G   +  +Y  LI    R  +  +A   L+ MI+ GH P    + S++  L + G++
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
           + A  +   MV +G   +  +   +++    +G + EA    + M++ G +P    ++SL
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           LS  S KG+      L    L + C+ ++ ++  +LD     G  + A+ +  ++   G 
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 618 VTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIR 648
             D  S + L+ G+  +G   +A  +L  MIR
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIR 290



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 69/182 (37%), Gaps = 35/182 (19%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK + A+ +L +M + GV  D   + +LI+ Y K G +  ++K+F  + + G+E    SY
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT-------------------------- 163
             +   + R G+   A   F  M++ G  P                              
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395

Query: 164 ---------YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
                    YN++++    + + +     F ++  RG S DV     ++    R    + 
Sbjct: 396 FECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEA 455

Query: 215 AE 216
           AE
Sbjct: 456 AE 457


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 219/462 (47%), Gaps = 16/462 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  ++  ++++L + GKLN AR +LLDM   G+  + + F +L+  Y K G ++E+ ++ 
Sbjct: 82  DNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVI 141

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           DIM +  V   V++Y  L   + + G+   A R  ++M +  + P   TYN+++ G F  
Sbjct: 142 DIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFEC 201

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
                     ++M+ +G+  + VTYN ++  Y +  KMD A     +M+E    P  +++
Sbjct: 202 SSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTF 261

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+  GY    R  +A R+ DEM    +K N+VT   +L  LC   K+ +  K+L    +
Sbjct: 262 NTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK 321

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R     + S    ++G   K G      ++ +  I  SI T    YG +I   C++   D
Sbjct: 322 RGYFVDEVSYGTLIMGYF-KVGKSXXWDEMKEKEIIPSIIT----YGTMIGGLCRSGKTD 376

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
           ++I   ++L+E  ++  P  T      +YN +I   C  GQ  KA   FR  M K    P
Sbjct: 377 QSIDKCNELLESGLV--PDQT------TYNTIILGYCREGQVDKA-FHFRNKMVKKSFKP 427

Query: 415 VAF--NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             F  N L+RG   EG  D A ++ K    +G   DA  +  +I     +G   +A   L
Sbjct: 428 DLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLL 487

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
             M E    P      +++ +L + GR++ A   M  +VE+G
Sbjct: 488 AEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQG 529



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 215/496 (43%), Gaps = 41/496 (8%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           ++ I  D+ K GV+ + + F +LI     +  + E++ +   MK         SY+ +  
Sbjct: 32  SKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILD 91

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
           ++ ++G+   A+     M + G+ P R+T+N+++ G+     L+ A    + M    +  
Sbjct: 92  VLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLP 151

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           DV TY T+I G  +  K+DEA +L  EM+   + P V++Y  +I G      +     + 
Sbjct: 152 DVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELI 211

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           DEM+   VKPNAVTY  ++      GKM      LR+M E    P D   F  L    CK
Sbjct: 212 DEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSP-DCVTFNTLSNGYCK 270

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL-------------- 360
           +G L+ A  ++  M R  +   +     ++   C     D A KLL              
Sbjct: 271 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 330

Query: 361 -----------------DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
                            D++ EKEII  P         +Y  MI  LC +G+T ++    
Sbjct: 331 YGTLIMGYFKVGKSXXWDEMKEKEII--PSII------TYGTMIGGLCRSGKTDQSIDKC 382

Query: 404 RQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
            +L++ G++ D   +N +I G+ +EG  D AF     M ++    D      L+     +
Sbjct: 383 NELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTE 442

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G    A     + I  G +  +  F +++  L E+GR + A  ++  M EK +  +    
Sbjct: 443 GMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTH 502

Query: 523 AKILEALLMRGHVEEA 538
             IL AL   G ++EA
Sbjct: 503 NAILSALADAGRMKEA 518



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 125/549 (22%), Positives = 234/549 (42%), Gaps = 61/549 (11%)

Query: 117 MKQLGVERSVKSYDALFKLILR---RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           MK+L ++ ++ + + L K ++R   +    ++K  F+ ++  G+E   +T+N+++ G  +
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
             KL  AI     MK      D V+YNT+++   +  K++EA  L  +MK   + P   +
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           +  ++ GY  +    +A  + D M   +V P+  TYT L+ GLC  GK+ E  ++  EM 
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 294 ERYIPPKDNSVFMKLLGV-QC---------------------------------KSGHLN 319
              + P   +  M + G  +C                                 K G ++
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A + L+ M       +   +  L   +CKA     A +++D++  K         L M 
Sbjct: 241 NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRK--------GLKMN 292

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
           + + N ++  LC   +   A        K+G  +D V++  LI G+ K G      E   
Sbjct: 293 SVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDE--- 349

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  + +      Y  +I    R G+   +    + ++E G  P  + + +++     +G
Sbjct: 350 -MKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREG 408

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           +V  A      MV+K  K +L     ++  L   G +++AL      +  G   +   F+
Sbjct: 409 QVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFN 468

Query: 556 SLLSVLSEKGKTIAAVKLL----DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
           +++S L E+G+   A  LL    +  LG DC     ++  +L AL  AG+   A   +  
Sbjct: 469 TIISGLCEEGRFEEAFDLLAEMEEKKLGPDCY----THNAILSALADAGRMKEAEEFMSG 524

Query: 612 IMEKGGVTD 620
           I+E+G + D
Sbjct: 525 IVEQGKLQD 533


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/558 (23%), Positives = 251/558 (44%), Gaps = 14/558 (2%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI+S   K  +  ++   D++ Q G+   + +Y AL   + R G        +++MLSEG
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           ++P    YN ++        +  A    + +    +S D  TY +MI G+ R   +D A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           ++F +M ++  EP  ++Y+T+I G     R ++A  +  EM    + P A T T  +  L
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           CD G   +  ++  +M  +   P +   +  L+   C SG L  A  +   M R  +   
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEP-NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI    +      A  +L+        L  ++       +YN MI+  C  G  
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLN--------LMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            KA +    ++++G   + V +N +I+G+   GN  SA  I+ +M   G   D  +Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I  + +  +   A    + M++DG  P    + ++++   +D ++ TA+ +++ M   G 
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
           + N+     ++  L  + +   A     +M++ G  PN   + +++  L + G T  A++
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           + +  + + C+ +L +Y  ++ AL   GK   A ++  ++   G + D  +  K+I    
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 633 QEGNTKQA-DILSRMIRG 649
             G  + A + L RMI+ 
Sbjct: 682 MSGKVEHAFNFLGRMIKA 699



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 153/612 (25%), Positives = 264/612 (43%), Gaps = 29/612 (4%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + ALQ F  + + G    +  T+  +I  L   G++N A  ++ +M   G+         
Sbjct: 267 DSALQVFNQMAKEGC-EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
            I +    G  +++ ++F  MK  G E +V +Y AL   +   G   +A   F++M  +G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TYN ++     + +++ A      M   G S ++VTYN MI GY       +A 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +   M ++     +++Y T+IKGY        ALRI D M+    KP+  +YT L+ G 
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   KM     +  EMV+  + P +   +  L+   CK   L+ A  +L+ M R      
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNE-VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y +LI    K   +  A +L   ++E+ I   P         +Y  MI  LC NG T
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF--PNVV------TYTAMIDGLCKNGST 616

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A   F +++++G L + + +++LIR   +EG  + A  +   + R G+  D   Y+ +
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 676

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM-----ESLFEDGRVQTASRVMKSM 510
           IE+Y+  G+   A   L  MI+ G  P    +  ++     E L  D R+     V+ + 
Sbjct: 677 IEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNC 736

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAA 570
                  + D V+      +M   + E    + + +Q       ++L+S LS  G+   A
Sbjct: 737 SFGYQTTDQDAVS------VMSAKLAELDPGLSVQVQ-------NALVSNLSTAGRWFEA 783

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            +LL   + +    D  +Y  +L +LL       A  +   +  +G         +LI  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 631 LNQEGNTKQADI 642
           L Q    K+A I
Sbjct: 844 LCQLHRRKEARI 855



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 249/562 (44%), Gaps = 16/562 (2%)

Query: 79  LLDM-PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
            LDM  + G++     +  L+    + G+    +  +  M   GV+ ++  Y+A+   + 
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G    A+    K+    + P   TY  M+ G      L++A++ F  M   G   + V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TY+T+ING     +++EA  L  EM    I PT  + T  I     +   +DA R+F +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           K+   +PN  TYTAL+ GLC +G +     +   M    + P +   +  L+ +  ++  
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP-NTVTYNALINILVENRR 405

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  VL  M R         Y  +I+ +C      +A+ +++ +++     R  S   
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ-----RGHSA-- 458

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFE 435
               +YN +I+  C +G T  A +    LM+ G   P   ++  LI G  K    +SAF 
Sbjct: 459 -NLVTYNTIIKGYCDSGNTTSA-LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   M   G+  +   Y  LI+ Y +  +   A + L+ M   G  P    +  ++  L 
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           +      A  + K M+E+G+  N+     +++ L   G    AL   + M++ G +PN  
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            + SL+  L ++GK   A  L         I D  +Y K+++A + +GK  +A++ L ++
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 613 MEKGGVTDWKSSDKLIAGLNQE 634
           ++ G      +   LI GL  E
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNE 718



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 211/494 (42%), Gaps = 10/494 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + G +  A  I+  + +  +  D   +  +I  + +K  +  ++++F+ M + G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E +  +Y  L   +   GR   A     +M+  GI PT HT    +         E A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R F DMK++G   +V TY  +I+G      +  A  LF  M    + P  ++Y  +I   
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           V   R   A  + + M      PN VTY  ++ G C  G   +   V+  M++R     +
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG-HSAN 459

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++   C SG+  +A  +L  M       +   Y  LI  FCK    + A  L +
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNL 420
           ++V+  +   P         +Y  +I   C + +   A      + + G    V  +N L
Sbjct: 520 EMVDDGLC--PNEV------TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G +K+ N   A E+ K+M   G+  +   Y  +I+   + G  + A    + MIE G 
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    + S++ +L ++G+V+ A  +   +   G+  +     K++EA +M G VE A  
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 541 RIDLMMQSGSVPNF 554
            +  M+++G  P  
Sbjct: 692 FLGRMIKAGCQPTL 705



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 221/494 (44%), Gaps = 21/494 (4%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N+L   +  ++A      + R G  + +  T+ +MI+    +G    A  ++ +M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGC-SPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++G   +   +  +I+ Y   G    +++I D+M+  G +    SY  L     +  + 
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   FN+M+ +G+ P   TY  ++ G+    KL+TA    E MK  G   +V TYN +
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +      AE+L   M E+ I P V++YT MI G         AL +F++M     
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN +TY++L+  L   GK+ E + +  E+ ER+    D   ++K++     SG +  A 
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAE--MYDRAIKLLDKLVEK-------------E 367
           + L  MI+         YG+LI+   K E  + D+ +  L  +V                
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGL-KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 749

Query: 368 IILRPQSTLD--MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
           ++    + LD  +     N ++ +L   G+  +A      ++ +G+  D  A+N+L+   
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            +  N D A  + K M  +G     + Y  LI +  +     +A+   ++M+    +P  
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 485 SLFRSVMESLFEDG 498
            +   +++ L  DG
Sbjct: 870 VVQAVLIDGLLRDG 883


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 152/624 (24%), Positives = 282/624 (45%), Gaps = 46/624 (7%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           F  N + N L G   SE+   F +  ++R   F  D  T   ++  L   GKL+ A  +L
Sbjct: 196 FSCNNILNALVGINKSEYVWLFLKESLDRK--FPLDVTTCNIVLNSLCTQGKLSKAESML 253

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             M K     +   +  ++  Y KKG  + +++I D M++ G+E  + +Y+ +   + + 
Sbjct: 254 QKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKL 312

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
            R   A     +M    + P   +YN ++ GFF   K+  AI  F  M  + +   V TY
Sbjct: 313 KRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATY 372

Query: 200 NTMINGYNRFKKMDEAEKLFAEMK--------------------EKNIEPTVISYTTMI- 238
             +I+GY R  + DEA ++  EM+                       I+P VI+Y+ +I 
Sbjct: 373 TALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALIN 432

Query: 239 KGYVAVERADDALRIFDEMK-SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +G +A   A+   +    MK SFDV     ++  ++   C  G ++E   V   MV    
Sbjct: 433 EGMIA--EAEQFKQYMSRMKISFDV----ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGW 486

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           PP D   +  LL   C+ GHL  A + +  ++  +   +      L+   CK    D A+
Sbjct: 487 PP-DICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEAL 545

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            L +K+V + I+  P      +  +Y  ++   C  G+   A I  + +++KG++ D +A
Sbjct: 546 DLCEKMVTRNIL--P------DTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIA 597

Query: 417 FNNLIRGHSKEGNPDSA-FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           +  L+ G   EG   +A +   +I+ + G+  D  AY  ++  YL+ G+  + +  + +M
Sbjct: 598 YTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNM 657

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            E+   P+S+ +  +M    + G++     + + MV++G+K +      ++  L   G +
Sbjct: 658 HENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLI 717

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           E A+  ++ M+  G  P+   FD L+   SEK K   A++L  +           +Y  +
Sbjct: 718 EIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAM 777

Query: 593 LDALLAAGKTLNAYSILFKIMEKG 616
           ++ L+       +Y IL  ++E G
Sbjct: 778 VNGLIRKNWLQQSYEILHDMVESG 801



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 127/586 (21%), Positives = 253/586 (43%), Gaps = 17/586 (2%)

Query: 63  IEILG-RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++I G R  +++ A+ IL  M   G+  D   +  LI     +G++ E+ +    M ++ 
Sbjct: 395 MQITGVRPREVSKAKQILKCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYMSRMK 450

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +   V S++ +     +RG  + A   ++ M+  G  P   TY  +L G      L  A 
Sbjct: 451 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 510

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            F   +  +  ++D  T NT++ G  +   +DEA  L  +M  +NI P   +YT ++ G+
Sbjct: 511 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGF 570

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               +   AL +   M    + P+ + YT LL GL + G++     + +E++ +     D
Sbjct: 571 CKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 630

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++    K G +N    +++ M    +   +  Y IL+  + K     R + L  
Sbjct: 631 CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 690

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            +V++ I  +P +       +Y  +I  LC  G    A  F  +++ +GV  D +AF+ L
Sbjct: 691 DMVKEGI--KPDNV------TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDIL 742

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I+  S++    +A ++   M    +   +  Y+ ++   +RK     +   L  M+E G 
Sbjct: 743 IKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGL 802

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P  + + +++ +    G +  A  + + M   GV  +    + I+  L   G VEEA+ 
Sbjct: 803 QPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAII 862

Query: 541 RIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
               +M++G VP    F +L+  L ++ K   A  L          +D+ +Y  ++  L 
Sbjct: 863 VFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLC 922

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
                 +A  +  ++  KG + +  +   L   +   G  +  + L
Sbjct: 923 NKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKL 968



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/518 (22%), Positives = 211/518 (40%), Gaps = 64/518 (12%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           S D L    ++ G+ + A      M   G + +  + N +L       K E    F ++ 
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKES 221

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
             R   LDV T N ++N      K+ +AE +  +MK   + P  ++Y T++  YV   R 
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRC 280

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
             ALRI D+M+   ++ +  TY  ++  LC   +      +L+ M E  + P D   +  
Sbjct: 281 KSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTP-DECSYNT 339

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+      G +N A  +   M+R S+      Y  LI+ +C+    D A ++L       
Sbjct: 340 LIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL------- 392

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHS 425
                    +M+ +   P         +  KA+   + ++  G+ DP  + ++ LI    
Sbjct: 393 --------YEMQITGVRPR--------EVSKAKQILKCMLADGI-DPDVITYSALI---- 431

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
            EG    A +  + M R  +  D  ++ C+I+SY ++G   +A +  D+M+  G  P   
Sbjct: 432 NEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDIC 491

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            + S++  L + G +  A   M  ++EK    +   +  +L  +   G ++EAL   + M
Sbjct: 492 TYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKM 551

Query: 546 MQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
           +    +P                                D  +Y  +LD     GK + A
Sbjct: 552 VTRNILP--------------------------------DTYTYTILLDGFCKRGKVVPA 579

Query: 606 YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
             +L  ++EKG V D  +   L+ GL  EG  K A  +
Sbjct: 580 LILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 617



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 150/305 (49%), Gaps = 8/305 (2%)

Query: 27  YNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           YN+L HG          L  +R + + G+   D  T+  +I  L   G +  A   L  M
Sbjct: 669 YNILMHGYIKKGQLSRTLYLYRDMVKEGI-KPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 727

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +GV  D   F++LI+++ +K  +  ++++F  MK L +  S K+Y A+   ++R+   
Sbjct: 728 VLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWL 787

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL-KLETAIRFFEDMKSRGISLDVVTYNT 201
             +    + M+  G++P +HT+ + L      +  ++ A    EDMK+ G+    V  ++
Sbjct: 788 QQSYEILHDMVESGLQP-KHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESS 846

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++ G  +  K++EA  +F+ +    + PT+ ++TT++ G     + DDA  +   M+S  
Sbjct: 847 IVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCG 906

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           +K + VTY  L+ GLC+   + +   +  EM  + + P + + ++ L G    +G +   
Sbjct: 907 LKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLP-NITTYITLTGAMYATGTMQDG 965

Query: 322 ADVLK 326
             +LK
Sbjct: 966 EKLLK 970



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 124/249 (49%), Gaps = 5/249 (2%)

Query: 21  FDHNLVYNVLHGAKNSE----HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           F  NL +++L  A + +    +ALQ F +++   + +   +T++ M+  L R   L  + 
Sbjct: 733 FPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHM-SPSSKTYVAMVNGLIRKNWLQQSY 791

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            IL DM + G+Q     +  LI +  + G +  + ++ + MK LGV  S  +  ++ + +
Sbjct: 792 EILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGL 851

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            + G+   A   F+ ++  G+ PT  T+  ++ G     K++ A    + M+S G+ +DV
Sbjct: 852 CKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDV 911

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VTYN +I G    K + +A  L+ EMK K + P + +Y T+     A     D  ++  +
Sbjct: 912 VTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKD 971

Query: 257 MKSFDVKPN 265
           ++   + P+
Sbjct: 972 IEDRGIVPS 980


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 232/484 (47%), Gaps = 14/484 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F+ LI+S        E+ + F  MK+ GV  ++++ ++L  L L+  R   A   + +M
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
               I+ + +T+N+M+       KL+ A  F   M++ G+  ++VTYNT+++GY    ++
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A+ +   MK + IEP   +Y ++I G     R ++A +IF+EM    ++P+AV Y  L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C+ G +        EM+++ I P   S +  L+         + A  ++K +    
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPT-MSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I  +A  Y ILI  +C+     +A  L D+++   I  +P         +Y  ++  L  
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI--KPTK------KTYTSLLHVLSK 443

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  +A+  F+++  +GVL D + FN LI GH    N   AFE++K M R  VP D   
Sbjct: 444 KNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT 503

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +  +++ + R+G+  +A+   D M   G  P    F +++      G ++ A RV   M+
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAV 571
           + G    +     +++ L      + A   +  M+  G  P+  +  +++    + IA V
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI----EGIAKV 619

Query: 572 KLLD 575
            + D
Sbjct: 620 NIPD 623



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 205/432 (47%), Gaps = 12/432 (2%)

Query: 2   AERAWTTRLQN-KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
            E AW    +  ++R     +  N++ NVL      + A  F   +E +G+   +  T+ 
Sbjct: 202 TEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGV-KPNIVTYN 260

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            ++      G++  A  IL  M ++ ++ D   +  LI    K+G ++E+ KIF+ M Q 
Sbjct: 261 TIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK 320

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+  S   Y+ L      +G   MA  Y ++ML +GI PT  TYN ++   F+  + + A
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEA 380

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
               ++++ +GIS D +TYN +INGY R     +A  L  EM    I+PT  +YT+++  
Sbjct: 381 ECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                R  +A  +F ++ S  V P+ + + AL+ G C    +    ++L++M    +PP 
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP- 499

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  ++   C+ G +  A ++   M R  I  +   +  LI  + +      A ++ 
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           +++++        +  +    +YN ++Q LC N +   AE   ++++ KG+  D   +  
Sbjct: 560 NEMLD--------TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611

Query: 420 LIRGHSKEGNPD 431
           LI G +K   PD
Sbjct: 612 LIEGIAKVNIPD 623



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 204/435 (46%), Gaps = 10/435 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M +KGV    +    L+  + K    + +  ++  M +L ++ SV +++ +  ++ + G+
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              AK +   M + G++P   TYN ++ G+  S ++E A      MK + I  D  TY +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G  +  +++EA K+F EM +K + P+ + Y T+I G+      D A    DEM    
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P   TY +L+  L    +  E + +++E+ E+ I P D   +  L+   C+  +   A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP-DAITYNILINGYCRCANAKKA 415

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   M+   I      Y  L+    K      A  L  K+  + ++  P   +     
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL--PDVIM----- 468

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            +N +I   C N     A    + + +  V  D V FN +++GH +EG  + A E+   M
Sbjct: 469 -FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM 527

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            RRG+  D  ++  LI  Y R+G+  DA    + M++ G +P    + ++++ L ++   
Sbjct: 528 KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEG 587

Query: 501 QTASRVMKSMVEKGV 515
             A  ++K MV KG+
Sbjct: 588 DLAEELLKEMVSKGM 602



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 208/460 (45%), Gaps = 11/460 (2%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           ++ A + F  ++  G+     ET   ++ +  ++ +   A  +  +M +  ++     F 
Sbjct: 167 ADEAFECFYTMKEKGVL-PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFN 225

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           ++I    K+G ++++      M+  GV+ ++ +Y+ +       GR   A      M  +
Sbjct: 226 IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            IEP   TY  ++ G     +LE A + FE+M  +G+    V YNT+I+G+     +D A
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
                EM +K I PT+ +Y ++I      +R D+A  +  E++   + P+A+TY  L+ G
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            C      +   +  EM+   I P   + +  LL V  K   +  A D+ K +    +  
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKT-YTSLLHVLSKKNRMKEADDLFKKITSEGVLP 464

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   +  LI+  C       A +LL  +   ++   P   +     ++N ++Q  C  G+
Sbjct: 465 DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKV---PPDEV-----TFNTIMQGHCREGK 516

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A   F ++ ++G+  D ++FN LI G+S+ G+   AF +   M   G       Y  
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           L++   +  E   A+  L  M+  G +P  + + +++E +
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 212/462 (45%), Gaps = 16/462 (3%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + ++ +I       + DEA + F  MKEK + PT+ +  +++  ++ + R + A  ++ E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    +K +  T+  ++  LC  GK+ + +  +  M    + P +   +  ++   C SG
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKP-NIVTYNTIVHGYCSSG 270

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            + AA  +L  M R  I  ++  YG LI   CK    + A K+ +++V+K   LRP + +
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG--LRPSAVI 328

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFE 435
                 YN +I   C+ G    A  +  +++KKG+   ++ +N+LI     E   D A  
Sbjct: 329 ------YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAEC 382

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           ++K +  +G+  DA  Y  LI  Y R      A    D M+  G  P    + S++  L 
Sbjct: 383 MIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLS 442

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE---EALGRIDLMMQSGSVP 552
           +  R++ A  + K +  +GV  ++ +   +++      +V+   E L  +D M       
Sbjct: 443 KKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV 502

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F++++     +GK   A +L D    R    D  S+  ++      G   +A+ +  ++
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562

Query: 613 MEKGGVTDWKSSDKLIAGL--NQEGNTKQADILSRMIRGEMS 652
           ++ G      + + L+ GL  NQEG+  + ++L  M+   M+
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAE-ELLKEMVSKGMT 603



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 179/429 (41%), Gaps = 58/429 (13%)

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I +  +IK    + RAD+A   F  MK   V P   T  +LL                  
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLL------------------ 193

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA-MIRLSIPTEAGHYGILIENFCKA 350
                      S+F+KL        +   AA VL A M RL I +    + I+I   CK 
Sbjct: 194 -----------SLFLKL--------NRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKE 234

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
               +A   +  +          S +     +YN ++   C +G+   A+      MK+ 
Sbjct: 235 GKLKKAKDFVGHM--------ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTT-MKRQ 285

Query: 411 VLDPVAFN--NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
            ++P +F   +LI G  K+G  + A +I + M ++G+   A  Y  LI+ +  KG    A
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
               D M++ G SP  S + S++ +LF + R   A  ++K + EKG+  +      ++  
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405

Query: 529 LLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
                + ++A    D M+ SG  P    + SLL VLS+K +   A  L         + D
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQADILS 644
           +  +  ++D   +      A+ +L K M++  V  D  + + ++ G  +EG  ++A    
Sbjct: 466 VIMFNALIDGHCSNSNVKGAFELL-KDMDRMKVPPDEVTFNTIMQGHCREGKVEEA---- 520

Query: 645 RMIRGEMSR 653
           R +  EM R
Sbjct: 521 RELFDEMKR 529



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 110/227 (48%), Gaps = 1/227 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ N      N++ A      +  +G+    ++T+  ++ +L +  ++  A  +   +
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGI-KPTKKTYTSLLHVLSKKNRMKEADDLFKKI 457

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +GV  D  MF  LI+ +     V+ + ++   M ++ V     +++ + +   R G+ 
Sbjct: 458 TSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKV 517

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F++M   GI+P   ++N ++ G+     ++ A R   +M   G +  V+TYN +
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNAL 577

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           + G  + ++ D AE+L  EM  K + P   +Y T+I+G   V   D+
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/272 (20%), Positives = 106/272 (38%), Gaps = 38/272 (13%)

Query: 410 GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV-----------------PRDADAY 452
           G    + F+ LI+        D AFE    M  +GV                  R   A+
Sbjct: 147 GFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAW 206

Query: 453 ICLIESY------------------LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           +   E +                   ++G+   AK  +  M   G  P    + +++   
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY 266

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
              GRV+ A  ++ +M  + ++ +      ++  +  +G +EEA    + M+Q G  P+ 
Sbjct: 267 CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSA 326

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             +++L+     KG    A    D  L +     +++Y  ++ AL    +T  A  ++ +
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           I EKG   D  + + LI G  +  N K+A +L
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLL 418


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/558 (23%), Positives = 251/558 (44%), Gaps = 14/558 (2%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI+S   K  +  ++   D++ Q G+   + +Y AL   + R G        +++MLSEG
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           ++P    YN ++        +  A    + +    +S D  TY +MI G+ R   +D A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           ++F +M ++  EP  ++Y+T+I G     R ++A  +  EM    + P A T T  +  L
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           CD G   +  ++  +M  +   P +   +  L+   C SG L  A  +   M R  +   
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEP-NVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI    +      A  +L+        L  ++       +YN MI+  C  G  
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLN--------LMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            KA +    ++++G   + V +N +I+G+   GN  SA  I+ +M   G   D  +Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I  + +  +   A    + M++DG  P    + ++++   +D ++ TA+ +++ M   G 
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
           + N+     ++  L  + +   A     +M++ G  PN   + +++  L + G T  A++
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           + +  + + C+ +L +Y  ++ AL   GK   A ++  ++   G + D  +  K+I    
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 633 QEGNTKQA-DILSRMIRG 649
             G  + A + L RMI+ 
Sbjct: 682 MSGKVEHAFNFLGRMIKA 699



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 153/612 (25%), Positives = 265/612 (43%), Gaps = 29/612 (4%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + ALQ F  + + G    +  T+  +I  L   G++N A  ++ +M   G+         
Sbjct: 267 DSALQVFNQMAKEGC-EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
            I +    G  +++ ++F  MK  G E +V +Y AL   +   G   +A   F++M  +G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TYN ++     + +++ A      M   G S ++VTYN MI GY       +A 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +   M ++     +++Y T+IKGY        ALRI D M+    KP+  +YT L+ G 
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   KM     +  EMV+  + P + + +  L+   CK   L+ A  +L+ M R      
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVT-YTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y +LI    K   +  A +L   ++E+ I   P         +Y  MI  LC NG T
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF--PNVV------TYTAMIDGLCKNGST 616

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A   F +++++G L + + +++LIR   +EG  + A  +   + R G+  D   Y+ +
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 676

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM-----ESLFEDGRVQTASRVMKSM 510
           IE+Y+  G+   A   L  MI+ G  P    +  ++     E L  D R+     V+ + 
Sbjct: 677 IEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNC 736

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAA 570
                  + D V+      +M   + E    + + +Q       ++L+S LS  G+   A
Sbjct: 737 SFGYQTTDQDAVS------VMSAKLAELDPGLSVQVQ-------NALVSNLSTAGRWFEA 783

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            +LL   + +    D  +Y  +L +LL       A  +   +  +G         +LI  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 631 LNQEGNTKQADI 642
           L Q    K+A I
Sbjct: 844 LCQLHRRKEARI 855



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 249/562 (44%), Gaps = 16/562 (2%)

Query: 79  LLDM-PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
            LDM  + G++     +  L+    + G+    +  +  M   GV+ ++  Y+A+   + 
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G    A+    K+    + P   TY  M+ G      L++A++ F  M   G   + V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TY+T+ING     +++EA  L  EM    I PT  + T  I     +   +DA R+F +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           K+   +PN  TYTAL+ GLC +G +     +   M    + P +   +  L+ +  ++  
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFP-NTVTYNALINILVENRR 405

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  VL  M R         Y  +I+ +C      +A+ +++ +++     R  S   
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ-----RGHSA-- 458

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFE 435
               +YN +I+  C +G T  A +    LM+ G   P   ++  LI G  K    +SAF 
Sbjct: 459 -NLVTYNTIIKGYCDSGNTTSA-LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   M   G+  +   Y  LI+ Y +  +   A + L+ M   G  P    +  ++  L 
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           +      A  + K M+E+G+  N+     +++ L   G    AL   + M++ G +PN  
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            + SL+  L ++GK   A  L         I D  +Y K+++A + +GK  +A++ L ++
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 613 MEKGGVTDWKSSDKLIAGLNQE 634
           ++ G      +   LI GL  E
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNE 718



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 211/494 (42%), Gaps = 10/494 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + G +  A  I+  + +  +  D   +  +I  + +K  +  ++++F+ M + G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E +  +Y  L   +   GR   A     +M+  GI PT HT    +         E A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R F DMK++G   +V TY  +I+G      +  A  LF  M    + P  ++Y  +I   
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           V   R   A  + + M      PN VTY  ++ G C  G   +   V+  M++R     +
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG-HSAN 459

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++   C SG+  +A  +L  M       +   Y  LI  FCK    + A  L +
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNL 420
           ++V+  +   P         +Y  +I   C + +   A      + + G    V  +N L
Sbjct: 520 EMVDDGLC--PNEV------TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G +K+ N   A E+ K+M   G+  +   Y  +I+   + G  + A    + MIE G 
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    + S++ +L ++G+V+ A  +   +   G+  +     K++EA +M G VE A  
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 541 RIDLMMQSGSVPNF 554
            +  M+++G  P  
Sbjct: 692 FLGRMIKAGCQPTL 705



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 221/494 (44%), Gaps = 21/494 (4%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N+L   +  ++A      + R G  + +  T+ +MI+    +G    A  ++ +M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGC-SPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++G   +   +  +I+ Y   G    +++I D+M+  G +    SY  L     +  + 
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   FN+M+ +G+ P   TY  ++ G+    KL+TA    E MK  G   +V TYN +
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +      AE+L   M E+ I P V++YT MI G         AL +F++M     
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN +TY++L+  L   GK+ E + +  E+ ER+    D   ++K++     SG +  A 
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAE--MYDRAIKLLDKLVEK-------------E 367
           + L  MI+         YG+LI+   K E  + D+ +  L  +V                
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGL-KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 749

Query: 368 IILRPQSTLD--MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
           ++    + LD  +     N ++ +L   G+  +A      ++ +G+  D  A+N+L+   
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            +  N D A  + K M  +G     + Y  LI +  +     +A+   ++M+    +P  
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 485 SLFRSVMESLFEDG 498
            +   +++ L  DG
Sbjct: 870 VVQAVLIDGLLRDG 883


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/558 (23%), Positives = 251/558 (44%), Gaps = 14/558 (2%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI+S   K  +  ++   D++ Q G+   + +Y AL   + R G        +++MLSEG
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           ++P    YN ++        +  A    + +    +S D  TY +MI G+ R   +D A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           ++F +M ++  EP  ++Y+T+I G     R ++A  +  EM    + P A T T  +  L
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           CD G   +  ++  +M  +   P +   +  L+   C SG L  A  +   M R  +   
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEP-NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI    +      A  +L+        L  ++       +YN MI+  C  G  
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLN--------LMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            KA +    ++++G   + V +N +I+G+   GN  SA  I+ +M   G   D  +Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I  + +  +   A    + M++DG  P    + ++++   +D ++ TA+ +++ M   G 
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
           + N+     ++  L  + +   A     +M++ G  PN   + +++  L + G T  A++
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           + +  + + C+ +L +Y  ++ AL   GK   A ++  ++   G + D  +  K+I    
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 633 QEGNTKQA-DILSRMIRG 649
             G  + A + L RMI+ 
Sbjct: 682 MSGKVEHAFNFLGRMIKA 699



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 153/612 (25%), Positives = 265/612 (43%), Gaps = 29/612 (4%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + ALQ F  + + G    +  T+  +I  L   G++N A  ++ +M   G+         
Sbjct: 267 DSALQVFNQMAKEGC-EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
            I +    G  +++ ++F  MK  G E +V +Y AL   +   G   +A   F++M  +G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TYN ++     + +++ A      M   G S ++VTYN MI GY       +A 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +   M ++     +++Y T+IKGY        ALRI D M+    KP+  +YT L+ G 
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   KM     +  EMV+  + P + + +  L+   CK   L+ A  +L+ M R      
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVT-YTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y +LI    K   +  A +L   ++E+ I   P         +Y  MI  LC NG T
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF--PNVV------TYTAMIDGLCKNGST 616

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A   F +++++G L + + +++LIR   +EG  + A  +   + R G+  D   Y+ +
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 676

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM-----ESLFEDGRVQTASRVMKSM 510
           IE+Y+  G+   A   L  MI+ G  P    +  ++     E L  D R+     V+ + 
Sbjct: 677 IEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNC 736

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAA 570
                  + D V+      +M   + E    + + +Q       ++L+S LS  G+   A
Sbjct: 737 SFGYQTTDQDAVS------VMSAKLAELDPGLSVQVQ-------NALVSNLSTAGRWFEA 783

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            +LL   + +    D  +Y  +L +LL       A  +   +  +G         +LI  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 631 LNQEGNTKQADI 642
           L Q    K+A I
Sbjct: 844 LCQLHRRKEARI 855



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 249/562 (44%), Gaps = 16/562 (2%)

Query: 79  LLDM-PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
            LDM  + G++     +  L+    + G+    +  +  M   GV+ ++  Y+A+   + 
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G    A+    K+    + P   TY  M+ G      L++A++ F  M   G   + V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TY+T+ING     +++EA  L  EM    I PT  + T  I     +   +DA R+F +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           K+   +PN  TYTAL+ GLC +G +     +   M    + P +   +  L+ +  ++  
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP-NTVTYNALINILVENRR 405

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  VL  M R         Y  +I+ +C      +A+ +++ +++     R  S   
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ-----RGHSA-- 458

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFE 435
               +YN +I+  C +G T  A +    LM+ G   P   ++  LI G  K    +SAF 
Sbjct: 459 -NLVTYNTIIKGYCDSGNTTSA-LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   M   G+  +   Y  LI+ Y +  +   A + L+ M   G  P    +  ++  L 
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           +      A  + K M+E+G+  N+     +++ L   G    AL   + M++ G +PN  
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            + SL+  L ++GK   A  L         I D  +Y K+++A + +GK  +A++ L ++
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 613 MEKGGVTDWKSSDKLIAGLNQE 634
           ++ G      +   LI GL  E
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNE 718



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 211/494 (42%), Gaps = 10/494 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + G +  A  I+  + +  +  D   +  +I  + +K  +  ++++F+ M + G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E +  +Y  L   +   GR   A     +M+  GI PT HT    +         E A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R F DMK++G   +V TY  +I+G      +  A  LF  M    + P  ++Y  +I   
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           V   R   A  + + M      PN VTY  ++ G C  G   +   V+  M++R     +
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG-HSAN 459

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++   C SG+  +A  +L  M       +   Y  LI  FCK    + A  L +
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNL 420
           ++V+  +   P         +Y  +I   C + +   A      + + G    V  +N L
Sbjct: 520 EMVDDGLC--PNEV------TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G +K+ N   A E+ K+M   G+  +   Y  +I+   + G  + A    + MIE G 
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    + S++ +L ++G+V+ A  +   +   G+  +     K++EA +M G VE A  
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 541 RIDLMMQSGSVPNF 554
            +  M+++G  P  
Sbjct: 692 FLGRMIKAGCQPTL 705



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 221/494 (44%), Gaps = 21/494 (4%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N+L   +  ++A      + R G  + +  T+ +MI+    +G    A  ++ +M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGC-SPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++G   +   +  +I+ Y   G    +++I D+M+  G +    SY  L     +  + 
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   FN+M+ +G+ P   TY  ++ G+    KL+TA    E MK  G   +V TYN +
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +      AE+L   M E+ I P V++YT MI G         AL +F++M     
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN +TY++L+  L   GK+ E + +  E+ ER+    D   ++K++     SG +  A 
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAE--MYDRAIKLLDKLVEK-------------E 367
           + L  MI+         YG+LI+   K E  + D+ +  L  +V                
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGL-KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 749

Query: 368 IILRPQSTLD--MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
           ++    + LD  +     N ++ +L   G+  +A      ++ +G+  D  A+N+L+   
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            +  N D A  + K M  +G     + Y  LI +  +     +A+   ++M+    +P  
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 485 SLFRSVMESLFEDG 498
            +   +++ L  DG
Sbjct: 870 VVQAVLIDGLLRDG 883


>gi|296084128|emb|CBI24516.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/586 (23%), Positives = 263/586 (44%), Gaps = 68/586 (11%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV---LIESYGKKGIVQES 110
           H  +    + + L R G L+  + ++  M K+     + +  V   LI+    KG V E+
Sbjct: 38  HHNKLCFTLTDRLIRRGVLSLGQQVVRRMIKQSPSVSDAILAVDKRLIDGLCDKGHVDEA 97

Query: 111 VKIFDIMKQ-LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
             +FD M++  G+  ++  Y  LF  + R+ R   A+ +  +M SEG    +  Y  ++ 
Sbjct: 98  FYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIH 157

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G+    K+ TA+R F  M   G   D  TYNT+I+G+ +    D+   L  +M E  ++P
Sbjct: 158 GYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQP 217

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            V++Y  MI+ Y    + D AL +   M SF++ P+  +YT L+  L    ++VEV+++ 
Sbjct: 218 NVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELY 277

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR-------LSIPTEAGH--- 339
           ++M++  + P D+ +F  L+  Q K   L+ A  +L+A+ +         + T A H   
Sbjct: 278 KKMLDIGVVP-DHVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPT 336

Query: 340 -------------------------YGILIENFCKAEMYDRAIKLLDKLV---------- 364
                                    +GI I   C A   D A+  +DK+V          
Sbjct: 337 QDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLST 396

Query: 365 ---------EKEIILRPQSTLDM--------EASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
                    ++ ++   +S +D+        + ++Y  M+   C++G    A     Q+ 
Sbjct: 397 YNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMN 456

Query: 408 KKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
           ++G+   VA ++++I   S+      A  + K+M   GV  DA  Y+ +I  Y +     
Sbjct: 457 ERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAI 516

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A+   D MIE G  P+S  + +V+  L ++  +      +  M++ G   N  L   ++
Sbjct: 517 EARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLI 576

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
              L +G +E A   +DLM ++    +  + ++++S   + I  V+
Sbjct: 577 NQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVR 622



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 132/666 (19%), Positives = 255/666 (38%), Gaps = 69/666 (10%)

Query: 22  DHNLVYNVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           D  +  +++HG    K    A++ F  + + G  + D  T+  +I    ++G  +    +
Sbjct: 148 DKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGC-DPDTYTYNTLIHGFVKLGLFDKGWIL 206

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
              M + G+Q +   + ++I  Y ++G V  ++ +   M    +  SV SY  L   + +
Sbjct: 207 HNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYK 266

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             R +  +  + KML  G+ P    +  ++       +L  A++  + +   G +LD+  
Sbjct: 267 ENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLDLCL 326

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
            +T            E E L  E+  +N     +++   I    A  + D AL   D+M 
Sbjct: 327 LSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMV 386

Query: 259 SFDVKPNAVTYTALLPGL-----------------------------------CDAGKMV 283
           S   +P   TY +L+  L                                   C+ G + 
Sbjct: 387 SLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLA 446

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
               +L +M ER + P   +++  ++G   +   +  A +V K M+   +  +A  Y  +
Sbjct: 447 SAFGLLDQMNERGLKP-SVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTM 505

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I  + K      A +L DK++E     +P S       SY  +I  L       K   + 
Sbjct: 506 ISGYSKNRRAIEARQLFDKMIEHG--FQPSS------HSYTAVISGLVKENMIDKGCSYL 557

Query: 404 RQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
             ++K G V + V + +LI    ++G  + AF +V +M R  +  D    I L+    R 
Sbjct: 558 SDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRN 617

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS--------------RVMK 508
             P   +      ++ G +    +   ++   F   R    S               +M+
Sbjct: 618 ITPVRRRWY---HVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQ 674

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
            +       NL L   I+        +++A    +LM   G  PN   F  L++  +  G
Sbjct: 675 KIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFG 734

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +   A+ L +         D  +Y  ++  L  AG+ L+A S+   + ++G   +  S +
Sbjct: 735 EIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYE 794

Query: 626 KLIAGL 631
           KL+  L
Sbjct: 795 KLLKCL 800



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 95/440 (21%), Positives = 179/440 (40%), Gaps = 41/440 (9%)

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G+   A  + +KM+S G  P   TYN ++   F    +E A    + M+  GI  D+ TY
Sbjct: 373 GKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATY 432

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
             M++ +     +  A  L  +M E+ ++P+V  Y ++I      +R  +A  +F  M  
Sbjct: 433 LIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLE 492

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             V P+A+ Y  ++ G     + +E +++  +M+E    P  +S    + G+  K   ++
Sbjct: 493 AGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGL-VKENMID 551

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI----------- 368
                L  M++         Y  LI  F +    + A +L+D +   +I           
Sbjct: 552 KGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALV 611

Query: 369 ---------ILRPQSTLDMEASSYNPMIQHLCHN--------------GQTGKAEIFFRQ 405
                    + R    +   ++    ++ HL H               G   K + F   
Sbjct: 612 SGVSRNITPVRRRWYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALN 671

Query: 406 LMKK-----GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
           LM+K      + +   +N +I G  +      A+   ++M   GV  +   +  LI  + 
Sbjct: 672 LMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHT 731

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           R GE   A    + M  DG +P    + ++++ L + GR+  A  V  +M ++G+  N  
Sbjct: 732 RFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKS 791

Query: 521 LVAKILEALLMRGHVEEALG 540
              K+L+ L    H+ + LG
Sbjct: 792 SYEKLLKCLCA-SHLGKYLG 810



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 108/480 (22%), Positives = 202/480 (42%), Gaps = 46/480 (9%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
            T+  +I+ L +   +  A+ ++  M + G+  D   + +++  +   G +  +  + D 
Sbjct: 395 STYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQ 454

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M + G++ SV  YD++   + RR R + A+  F  ML  G++P    Y  M+ G+  + +
Sbjct: 455 MNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRR 514

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A + F+ M   G      +Y  +I+G  +   +D+     ++M +    P  + YT+
Sbjct: 515 AIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTS 574

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I  ++     + A R+ D M    ++ + +T  AL+ G         V + +  +  R+
Sbjct: 575 LINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSG---------VSRNITPVRRRW 625

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
              K  S  ++ + +     HL   + V+     LS P  +      I+ F        A
Sbjct: 626 YHVKSGSARVREILL-----HLLHQSFVIPRENNLSFPRGSPRK---IKYF--------A 669

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           + L+ K+  K     P   L      YN +I   C       A   F  +  +GV  + V
Sbjct: 670 LNLMQKI--KGSSFMPNLYL------YNGIISGFCRANMIQDAYNHFELMQTEGVCPNQV 721

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            F  LI GH++ G  D A  +   M   G+  D   Y  LI+   + G   DA +   +M
Sbjct: 722 TFTILINGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTM 781

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK--ENLDLVAKILEALLMRG 533
            + G  P  S +  +++ L        AS + K +   GVK   NL  + + L +L++ G
Sbjct: 782 HKRGLFPNKSSYEKLLKCL-------CASHLGKYL---GVKLDTNLPYILQHLWSLVIWG 831



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 181/454 (39%), Gaps = 55/454 (12%)

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS-YTTMIKGYVAVERADDALRIFDEMKSF 260
           +I+G      +DEA  +F  M+E+   P  I  Y T+  G    ER ++A     EM+S 
Sbjct: 84  LIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESE 143

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
               + + YT+L+ G C   KM    +V   M++    P D   +  L+    K G  + 
Sbjct: 144 GHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDP-DTYTYNTLIHGFVKLGLFDK 202

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
              +   M    +      Y I+I  +C+    D A+ LL  +          S+ ++  
Sbjct: 203 GWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSM----------SSFNLTP 252

Query: 381 S--SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
           S  SY  +I  L    +  + E  +++++  GV+ D V F  L++   K      A +I+
Sbjct: 253 SVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKIL 312

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED----GHSPASSLFRSVMES 493
           + + + G   D    +CL+ +        D +  ++ ++ +      + A   F   + +
Sbjct: 313 QAIAKNGCNLD----LCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISA 368

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L   G+   A   M  MV  G +  L     +++ L     VE+A   IDLM ++G VP 
Sbjct: 369 LCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVP- 427

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
                                          DLA+Y  ++      G   +A+ +L ++ 
Sbjct: 428 -------------------------------DLATYLIMVHEHCNHGDLASAFGLLDQMN 456

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           E+G        D +I  L++     +A+ + +M+
Sbjct: 457 ERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMM 490


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 220/459 (47%), Gaps = 15/459 (3%)

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  +L  M   GV+ D   +  LI        V ++V++   M + G+E +V  Y +L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
            +   + GR+    + F +M  +GIEP    Y  ++       K + A    + M  RG+
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             +VVTYN +IN   +   + EA  +  +M EK + P V++Y T+IKG   V   D+A+ 
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 253 IFDEMKSFD--VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           + +EM      VKPN VT+ +++ GLCD G+M +  +V R M+E      +   +  L+G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-RAMMEETGCMVNLVTYNLLIG 370

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
              +   +  A +++  M  L +  ++  Y ILI+ FCK    DRA  LL  + ++ I  
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI-- 428

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNP 430
                 + E   Y P++  +C  G   +A   F ++     LD VA++ +I G  K G+ 
Sbjct: 429 ------EPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDL 482

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
            +A E++K +   G+  DA  Y  +I  + + G+   A   L  M   G  P  ++F S+
Sbjct: 483 KTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSL 542

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
           ++     G +     +++ M+ K    N+ L +KI+  L
Sbjct: 543 IQGYSTKGEINKVLELIREMITK----NIALDSKIISTL 577



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 239/540 (44%), Gaps = 57/540 (10%)

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE---GIEPTRHTYN 165
           E+  + D +  +   R   SY+ +   + RRG +  A      M  E      P   +Y 
Sbjct: 63  EATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYT 119

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
           V++         + A+     M+S G+  DVVTY T+I G     ++D+A +L  EM E 
Sbjct: 120 VLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES 179

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            IEP V+ Y+++++GY    R +D  ++F EM    ++P+ V YT L+  LC  GK  + 
Sbjct: 180 GIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKA 239

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
             V+  MV R + P +   +  L+   CK G +  A  VLK M    +  +   Y  LI+
Sbjct: 240 HGVMDMMVRRGLEP-NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIK 298

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA------ 399
                   D A+ LL+++V  + I++P         ++N +IQ LC  G+  +A      
Sbjct: 299 GLSDVLEMDEAMWLLEEMVRGKNIVKPNVV------TFNSVIQGLCDIGRMRQAFQVRAM 352

Query: 400 --------EIFFRQLMKKGVL----------------------DPVAFNNLIRGHSKEGN 429
                    +    L+  G+L                      D   ++ LI+G  K   
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ 412

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            D A +++  M  RG+  +   YI L+ +   +G    A+   + M  D + P   +  S
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYS 470

Query: 490 VM-ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            M     + G ++TA  ++KS+V++G+  +    + ++      G +E A G +  M  S
Sbjct: 471 TMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTAS 530

Query: 549 GSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA--GKTL 603
           G +P+   FDSL+   S KG+    ++L+   + ++  +D      +  +L+A+  GK L
Sbjct: 531 GFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKAL 590



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 166/358 (46%), Gaps = 20/358 (5%)

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT---EAGHYGILIENFCKAEMYDRA 356
           +D   +  +L   C+ GH + A  +L+AM     P     A  Y +L+   C   + D+A
Sbjct: 75  RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
           + LL  +          + +  +  +Y  +I+ LC   +  KA     ++ + G+ +P  
Sbjct: 135 VGLLRSM--------RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGI-EPNV 185

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +++L++G+ K G  +   ++   M  +G+  D   Y  LI+S  + G+   A   +D 
Sbjct: 186 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+  G  P    +  ++  + ++G V+ A  V+K M EKGV  ++     +++ L     
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305

Query: 535 VEEALGRIDLMMQSGSV--PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           ++EA+  ++ M++  ++  PN   F+S++  L + G+   A ++        C+++L +Y
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTY 365

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
             ++  LL   K   A  ++ ++   G   D  +   LI G  +     +A D+LS M
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 116/281 (41%), Gaps = 45/281 (16%)

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--------VAFNNLIRGHSKEGNP 430
           +A SYN ++  LC  G   +A    R +     L+P        V++  L+R    +   
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAM----SLEPHPACRPNAVSYTVLMRALCADRLA 131

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D A  +++ M   GV  D   Y  LI       E   A   +  M E G  P   ++ S+
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           ++   + GR +   +V   M EKG++ ++ +   ++++L   G  ++A G +D+M++ G 
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 551 VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
            PN                                + +Y  +++ +   G    A  +L 
Sbjct: 252 EPN--------------------------------VVTYNVLINCMCKEGSVKEAIGVLK 279

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGE 650
           K+ EKG   D  + + LI GL+      +A  +L  M+RG+
Sbjct: 280 KMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 260/529 (49%), Gaps = 30/529 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +  + + A  +  +M  +G++ +E  + +LI +  K+G++++++ +FD M+  G
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +V  Y++L     ++G    A+   + M+ EG+ PT  +Y+ ++ G   +  L + +
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M  RGI+ +  T+  +ING+ + KKMDEA +LF +M + N+ P  +++  MI+GY
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 546

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             V     A +++D+M    +KP+  TY +L+ GLC    + +  + + ++   Y    +
Sbjct: 547 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 606

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI---------ENFCKA-- 350
            S+   L G   + G       +   M    +  +   + I++         E  C    
Sbjct: 607 FSLTALLYGFF-REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 665

Query: 351 EMYDRAIK--------LLDKLVEKEIILRPQSTLD-MEASSYNP-------MIQHLCHNG 394
           EM ++ +K        ++D L ++E +++  +  D M    Y+P       +I +LC +G
Sbjct: 666 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG 725

Query: 395 QTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
             G AE+  ++++   VL +   +N  +   + EG+ + A ++   M  +G      ++ 
Sbjct: 726 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFN 784

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI+   + G+  +A   +  + E G SP    + +++  L + G +  A  +   M+ K
Sbjct: 785 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 844

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
           G+K ++      +    + G  ++ALG    M++SG  PN+D+  ++LS
Sbjct: 845 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 893



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 265/598 (44%), Gaps = 13/598 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++    R+ +L  A  I  DM + G    E     +I+   KK +V+E+  + 
Sbjct: 290 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 349

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             +  LG+  +V +Y+AL   + +  R+  A R F +M   G+EP   TY +++      
Sbjct: 350 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 409

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A+  F+ M+ +GI + V  YN++INGY +   +D A  L + M ++ + PT  SY
Sbjct: 410 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 469

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I G          + +  EM    +  N  T+TAL+ G C   KM E  ++  +M++
Sbjct: 470 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 529

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P + + F  ++   C  G++  A  +   M+ + +  +   Y  LI   C      
Sbjct: 530 SNVIPNEVT-FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 588

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
           +A + +  L     +L           S   ++      G+  +    + ++  +GV LD
Sbjct: 589 KANEFVADLENSYAVL--------NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 640

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V+F  ++    K+ + + +  + + M  +GV  D   Y C+I++  ++     A    D
Sbjct: 641 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 700

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+ DG+SP +     ++ +L + G + +A  + K M+   V  N       L+     G
Sbjct: 701 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 760

Query: 534 HVEEALGRIDLMMQS--GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
            +E+A      M+Q    S+ +F+ L+  L + GK   A+ L+          D  SY  
Sbjct: 761 DMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 820

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           ++  L   G    A+ +  +++ KG   D  + +  I   N  G + +A  I + MIR
Sbjct: 821 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 878



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 140/652 (21%), Positives = 258/652 (39%), Gaps = 68/652 (10%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           ++ T  +++  L ++ +   AR +   M + GV  DE ++   I +Y +   +  +  + 
Sbjct: 185 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 244

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  GV+ S   Y+ L   + +  R   A    N M++ G+     TY  +++GF   
Sbjct: 245 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 304

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +LE A+R   DM   G        + MI+   + + ++EA  L  ++ +  + P V +Y
Sbjct: 305 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 364

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT-------------------------- 268
             +I      ER DDA R+F EM    ++PN VT                          
Sbjct: 365 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 424

Query: 269 ---------YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
                    Y +L+ G C  G +   + +L  MV+  + P   S +  L+   C++G L+
Sbjct: 425 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS-YSPLIAGLCRNGDLS 483

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP------- 372
           +  ++ + M    I      +  LI  FCK +  D A +L DK+++  +I          
Sbjct: 484 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 543

Query: 373 --------------------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GV 411
                               +  L  +  +Y  +I  LC      KA  F   L     V
Sbjct: 544 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 603

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           L+  +   L+ G  +EG     + +   M  RGV  D  ++  ++ + L++ +   +   
Sbjct: 604 LNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVL 663

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
              M E G  P    +  ++++L ++  +  A      MV  G   N      ++  L  
Sbjct: 664 FREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCK 723

Query: 532 RGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
            G++  A      M+    +PN   ++  L   + +G    A K L   + +  +  + S
Sbjct: 724 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVS 782

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +  ++  L  AGK   A  ++ KI E G   D  S   +I  L + G+  +A
Sbjct: 783 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKA 834



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 135/607 (22%), Positives = 249/607 (41%), Gaps = 90/607 (14%)

Query: 125 SVKSYDA---LFKLILRRGRYMMAKRYFNKML---------------------------- 153
           +V  Y A   LF L+  R ++ +A+  F+KML                            
Sbjct: 183 TVNQYTASQILFSLVKIR-QFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 241

Query: 154 -------SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                  SEG++ +   YNV+++G   +++++ A+     M + G++ D VTY T++ G+
Sbjct: 242 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF 301

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R ++++ A ++  +M      P+  + + MI      E  ++A  +  ++    + PN 
Sbjct: 302 CRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 361

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
             Y AL+  LC   +  +  ++ +EM  R + P + + +  L+   CK G +  A  +  
Sbjct: 362 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVT-YAILIHALCKRGMIEDALCLFD 420

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M    I      Y  LI  +CK    DRA  LL  +V++         L   A+SY+P+
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE--------GLTPTAASYSPL 472

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC NG         R++ ++G+  +   F  LI G  K+   D A  +   M    V
Sbjct: 473 IAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 532

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL----------- 494
             +   +  +IE Y   G    A    D M+E G  P +  +RS++  L           
Sbjct: 533 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 592

Query: 495 ------------------------FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
                                   F +GR      +   M  +GVK +L     I+ A L
Sbjct: 593 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 652

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            +   E++      M + G  P+   +  ++  LS++   I A+   D  +      +  
Sbjct: 653 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 712

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK-SSDKLIAGLNQEGNTKQA-DILSR 645
           ++  +++ L  +G  L +  +L K M  G V   K + +  +     EG+ ++A D+ S 
Sbjct: 713 THTVLINNLCKSG-YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 771

Query: 646 MIRGEMS 652
           M++G ++
Sbjct: 772 MLQGHLA 778



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/423 (22%), Positives = 181/423 (42%), Gaps = 34/423 (8%)

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS GI   ++T + +L+      +   A   F+ M   G+ LD   Y   I  Y   + +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D A  L   M+ + ++ + + Y  ++ G     R  +A+ + + M +  V  + VTY  L
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 273 LPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFM-----------KLLGVQCKSGHLNA 320
           + G C   ++    ++  +M+   ++P + N  FM           +   + CK G L  
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
             +V               Y  LI+  CK E +D A +L  ++  +   L P        
Sbjct: 358 VPNVFA-------------YNALIDKLCKNERFDDADRLFKEMAGRG--LEPNEV----- 397

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y  +I  LC  G    A   F ++  KG+   V  +N+LI G+ K+G+ D A  ++  
Sbjct: 398 -TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 456

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M + G+   A +Y  LI    R G+ +        M E G +  +  F +++    +D +
Sbjct: 457 MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 516

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
           +  A+R+   M++  V  N      ++E   + G++ +A    D M++ G  P+  +  S
Sbjct: 517 MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 576

Query: 560 VLS 562
           ++S
Sbjct: 577 LIS 579



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 8/240 (3%)

Query: 77  CILL-DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
           C+L  +M ++GV+ D+  +  +I++  K+  + +++  +D M   G   +  ++  L   
Sbjct: 661 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 720

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS---RGI 192
           + + G    A+    +ML+  + P + TYN  L  F     +E A    +D+ S   +G 
Sbjct: 721 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA----KDLHSAMLQGH 776

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
              +V++N +I G  +  K+ EA  L +++ E    P  ISY+T+I     +   + A  
Sbjct: 777 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFE 836

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +++EM    +KP+ V Y   +      G+  +   +   M+   + P  ++    L G+ 
Sbjct: 837 LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 896


>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/585 (23%), Positives = 271/585 (46%), Gaps = 24/585 (4%)

Query: 19  PQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           P  +H  V  ++   K++  AL++FRW      F H + T+  +I  L    + +  + +
Sbjct: 34  PSQEH--VSQLILDQKSASEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQL 91

Query: 79  LLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           L +MP   G    +D+F  +I   G+  + +  +K+ D++ +     S+K ++++  +++
Sbjct: 92  LDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLV 151

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           +    M  + Y   M++ G+E   +T+ +++ G  L+ ++    +  + +KSRG++ + V
Sbjct: 152 KEDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTV 211

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            YNT+++   R  K+  A  L  EM+    +P  +++  +I GY     +  AL + ++ 
Sbjct: 212 VYNTLLHALCRNGKVGRARNLMNEME----DPNDVTFNILISGYCKEGNSVQALVLLEKS 267

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S    P+ V+ T +L  LC+AG+ +E  +VL E VE      D   +  L+   C +G 
Sbjct: 268 FSMGFVPDVVSVTKVLEILCNAGRTMEAAEVL-ERVESMGGLLDVVAYNTLIKGFCGAGK 326

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +      LK M           Y +LI  F ++ M D A+ L + +    I         
Sbjct: 327 VKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGI--------K 378

Query: 378 MEASSYNPMIQHLCHNG--QTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAF 434
               +++ +I+ LC     + G + +   +  K+G    ++ +N++I G  K+   D + 
Sbjct: 379 WNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESA 438

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           E +  MG    PR  D  + ++E + +KG   DAK   D MI++G  P+  ++  ++   
Sbjct: 439 EFLTKMGNL-FPRAVDRSLMILE-HCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGF 496

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            + G V+ A  +M  M+             ++     +G VE AL  ++ +   G VPN 
Sbjct: 497 SKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNT 556

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             +  L+ VL   G    A+++    + +  + DL  +  +L +L
Sbjct: 557 ETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSL 601



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 103/494 (20%), Positives = 195/494 (39%), Gaps = 95/494 (19%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEK-NIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           TY  +I+    F++ D  ++L  EM       P    + T+I+G          +++ D 
Sbjct: 71  TYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDL 130

Query: 257 MKSFDVKP-----NAV------------------------------TYTALLPGLCDAGK 281
           +  F   P     N++                              T+  L+ GLC   +
Sbjct: 131 VYKFHGSPSLKIFNSILDVLVKEDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNR 190

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           + E  K+L+ +  R + P +  V+  LL   C++G +  A +++  M     P +   + 
Sbjct: 191 IGEGFKLLQLIKSRGVAP-NTVVYNTLLHALCRNGKVGRARNLMNEM---EDPNDV-TFN 245

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-E 400
           ILI  +CK     +A+ LL+K      +         +  S   +++ LC+ G+T +A E
Sbjct: 246 ILISGYCKEGNSVQALVLLEKSFSMGFV--------PDVVSVTKVLEILCNAGRTMEAAE 297

Query: 401 IFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
           +  R     G+LD VA+N LI+G    G        +K M  +G   + D Y  LI  + 
Sbjct: 298 VLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFS 357

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
             G    A    + M  DG       F +++  L  + R++    +++ M E   KE   
Sbjct: 358 ESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEES--KEG-- 413

Query: 521 LVAKILEALLMRGHVEEALGRI-DLMMQSGSVPNFDSLLSVLSEKGKTIA-----AVKLL 574
                      RGH+      I  L+ ++G    FD     L++ G         ++ +L
Sbjct: 414 ----------SRGHISPYNSIIYGLLKKNG----FDESAEFLTKMGNLFPRAVDRSLMIL 459

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           + C                      G   +A  +  +++++GG+      + L+ G +++
Sbjct: 460 EHC--------------------KKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQ 499

Query: 635 GNTKQA-DILSRMI 647
           GN ++A ++++ MI
Sbjct: 500 GNVREAVELMNEMI 513


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 221/457 (48%), Gaps = 9/457 (1%)

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           I  Y K G++ ++V++FD M Q         Y+    +++   R+ +A  Y+++M + G 
Sbjct: 16  IAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGF 75

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
             +  TY+  + G               DM++     D+  +N  ++      ++D A +
Sbjct: 76  SLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALE 135

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           +F ++ +   +P V++YT +I G   +++ D A++ + +M      P+     A++ GLC
Sbjct: 136 VFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLC 195

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
           D  K+    +++ ++++         V+  L+   C++G ++ A  +   M R     + 
Sbjct: 196 DGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDL 255

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y + +  FC   M D A KLL KL+E+       S ++ +  SYN +++ +C      
Sbjct: 256 VTYNVFLNYFCDELMLDDAKKLL-KLMER-------SGIEPDVYSYNQLLKGICKGNCPD 307

Query: 398 KAEIFF-RQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           KA +    ++  KG+ D V++N +I+   K G+  SA+++ + MG++G+P D   +   I
Sbjct: 308 KAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFI 367

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           +++L KG    AK  LD M E G SP    + ++++ L + G+V+ A  +   MVE+G+ 
Sbjct: 368 KAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGIS 427

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            ++     ++        V EA+   + M   GS P+
Sbjct: 428 PDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPD 464



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 108/491 (21%), Positives = 211/491 (42%), Gaps = 20/491 (4%)

Query: 18  VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           V   D+N    VL      + A  ++  +   G F+    T+ + I  L +V        
Sbjct: 42  VFSIDYNRFIGVLINHSRFDLANHYYSQMGTRG-FSLSSFTYSRFITGLCKVKNFTFIDE 100

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L DM       D   F + +     +G +  ++++F+ + + G +  V +Y  +   + 
Sbjct: 101 LLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVC 160

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED-MKSRGISLDV 196
           +  ++  A +++  M+ +G  P       ++ G     K++ A     D MKS  + L  
Sbjct: 161 KIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLST 220

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + YN +I+G+ R  ++D+A+ + + M+    EP +++Y   +  +      DDA ++   
Sbjct: 221 LVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKL 280

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQCK 314
           M+   ++P+  +Y  LL G+C         K    M  +  P    D   +  ++   CK
Sbjct: 281 MERSGIEPDVYSYNQLLKGICKGNC---PDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCK 337

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G   +A  + + M +  IP +   + I I+ F     ++ A KLLD++ E    L P  
Sbjct: 338 IGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMG--LSPDC 395

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
                   Y  +I HLC +G+   A   F  ++++G+  D ++FN LI G  K      A
Sbjct: 396 IF------YTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEA 449

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             + + M  RG   D   Y  +I   + + + + A      M++ G     +L R++ ++
Sbjct: 450 MHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGF----TLDRAIAQT 505

Query: 494 LFEDGRVQTAS 504
           L     ++ AS
Sbjct: 506 LIRGNSIENAS 516



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/337 (18%), Positives = 127/337 (37%), Gaps = 48/337 (14%)

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I  + KA + D+A+++ D++         QS   + +  YN  I  L ++ +   A  ++
Sbjct: 16  IAGYVKAGLIDKAVQVFDEM--------SQSNCRVFSIDYNRFIGVLINHSRFDLANHYY 67

Query: 404 RQLMKKGV-LDPVAFNNLIRGHSK-----------------------------------E 427
            Q+  +G  L    ++  I G  K                                   E
Sbjct: 68  SQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVE 127

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G  D A E+ + + + G   D   Y  +I    +  +   A      MI  G SP +   
Sbjct: 128 GRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKAC 187

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKG-VKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
            +++  L +  +V  A  ++  +++ G VK +  +   ++      G +++A      M 
Sbjct: 188 GAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMR 247

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
           ++G  P+   ++  L+   ++     A KLL          D+ SY ++L  +       
Sbjct: 248 RNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPD 307

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            AY ++   M   G+ D  S + +I    + G+T  A
Sbjct: 308 KAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSA 344


>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
 gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 220/450 (48%), Gaps = 15/450 (3%)

Query: 34  KNSEHALQFFRWVERA-GLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           +N + ALQ F +  +    F H+ +T+  +I  L R         +LL++   G+   ED
Sbjct: 63  QNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSED 122

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F  +I SYG     + ++K F  ++  GV RSV+S + L   +++  R+      F   
Sbjct: 123 LFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYS 182

Query: 153 LSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
            S+ G+ P   T N+++        +E A + F++M S GI  +VVTY T++ GY     
Sbjct: 183 KSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGD 242

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           M  A+++F E+ +    P   +YT ++ GYV   R  DA+++ DEM+   V+PN +TY  
Sbjct: 243 MIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGV 302

Query: 272 LLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           ++ G C   K  E   +L +M+E +YIP  ++++  K++ V C  G +  A  + + +++
Sbjct: 303 IILGYCKERKSGEALNLLNDMLEKKYIP--NSALCCKVIDVLCGEGRVKEACKMWEKLLK 360

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
            +   +      LI   CK      A KL ++     I     S+L     +YN +I  +
Sbjct: 361 KNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTI-----SSL----LTYNTLIAGM 411

Query: 391 CHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C  G+  +A   +  +++KG V +   +N LI+G  K G      ++V+ M  +G   + 
Sbjct: 412 CEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNE 471

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDG 479
             Y+ L+E  L+ G+  +    L  +I  G
Sbjct: 472 STYLILVEGLLKLGKREELLNILSMIISSG 501



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 193/432 (44%), Gaps = 21/432 (4%)

Query: 128 SYDALFKLILRRGR---YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           +YD    +I R  R   +   +    ++   GI  +   +  ++  + L+ + + A++ F
Sbjct: 85  NYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTF 144

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK-NIEPTVISYTTMIKGYVA 243
             +++ G+   V + NT++N   +  +      LF   K K  + P V +   +IK    
Sbjct: 145 LRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCK 204

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDN 302
               + A ++FDEM S  + PN VTYT +L G    G M+  ++V  E+ +  ++P  D 
Sbjct: 205 KNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLP--DA 262

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           + +  L+    K G    A  V+  M    +      YG++I  +CK      A+ LL+ 
Sbjct: 263 TTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLND 322

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
           ++EK+ I  P S L  +      +I  LC  G+  +A   + +L+KK    D    + LI
Sbjct: 323 MLEKKYI--PNSALCCK------VIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLI 374

Query: 422 RGHSKEGNPDSAFEIVKIMGR--RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
               KEGN    +E  K+     RG       Y  LI      GE  +A    D M+E G
Sbjct: 375 HWLCKEGN---IWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKG 431

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  +++   + G+ +   +V++ M++KG   N      ++E LL  G  EE L
Sbjct: 432 CVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELL 491

Query: 540 GRIDLMMQSGSV 551
             + +++ SG+V
Sbjct: 492 NILSMIISSGAV 503



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 98/488 (20%), Positives = 200/488 (40%), Gaps = 83/488 (17%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TY+ +I   +R +  +  E L  E+++  I  +   + T+I+ Y    R   AL+ F  +
Sbjct: 88  TYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRI 147

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           ++F V+ +  +   LL  L    +   V  + +    ++                     
Sbjct: 148 QTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKF--------------------- 186

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                +V                 ILI+  CK    + A K+ D++        P   + 
Sbjct: 187 -GVVPNVFTC-------------NILIKALCKKNDVEGARKVFDEM--------PSMGIV 224

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
               +Y  ++      G    A+  F +L   G L D   +  L+ G+ K+G    A ++
Sbjct: 225 PNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKV 284

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +  M   GV  +   Y  +I  Y ++ +  +A   L+ M+E  + P S+L   V++ L  
Sbjct: 285 MDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCG 344

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA------------------ 538
           +GRV+ A ++ + +++K    +  + + ++  L   G++ EA                  
Sbjct: 345 EGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTY 404

Query: 539 ---------LGRI-------DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLG 579
                    +G +       D M++ G VPN   ++ L+    + GK    +K+++  L 
Sbjct: 405 NTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLD 464

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
           + C+++ ++Y  +++ LL  GK     +IL  I+  G V D+K+ +  +       N +Q
Sbjct: 465 KGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAV-DFKAWNLFVPHFVSNVN-EQ 522

Query: 640 ADILSRMI 647
           A+IL +++
Sbjct: 523 ANILEKIL 530


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/569 (24%), Positives = 278/569 (48%), Gaps = 28/569 (4%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F +LI     +G ++++V I  +M++ G   ++ SY+ L     ++GR+  A    + M 
Sbjct: 178 FNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHME 237

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +GI+    TYN+ +     + +        + M+++ I+ + V+YNT+ING+ +  K+ 
Sbjct: 238 CKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIG 297

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A ++F EM E N+ P +I+Y  +I GY      ++ALR+ D M++ DV+PN VT   LL
Sbjct: 298 VATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLL 357

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK---LLGVQCKSGHLNAAADVLKAMIR 330
            GL  + K      V R ++ERY   + +   +    ++   C++G L+ A  +L  M +
Sbjct: 358 NGLYKSAKF----DVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCK 413

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +  +   + +LI  FCK    ++A +++ K+  +  +  P + +      ++ +I + 
Sbjct: 414 DGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFV--PNNVI------FSTLIYNS 465

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C  G   +A  F+  +   G   D    N+L+    + G    A E +  + R G+  ++
Sbjct: 466 CKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             + C+I  Y   G+ + A +  D MI  GH P+   + S+++ L +      A +++K 
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 510 MVEKGVKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           +    +   +D ++   ++  +   G++ EA+   + M+Q+  +P+   +  +LS L  +
Sbjct: 586 L--HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIRE 643

Query: 565 GKTIAAVKLLDFCLGRDCIIDLAS--YEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DW 621
           G+ + A   L   + ++ I+ L S  Y   +D L  AG++  A   LFK ME+ G++ D 
Sbjct: 644 GRLVCAFIFLGRLMQKE-ILTLNSIVYTCFIDGLFKAGQS-KAALYLFKEMEEKGLSLDL 701

Query: 622 KSSDKLIAGLNQEGNTKQADILSRMIRGE 650
            + + +  G ++ G    A  L    R +
Sbjct: 702 IALNSITDGYSRMGKVFSASSLISKTRNK 730



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 153/639 (23%), Positives = 278/639 (43%), Gaps = 38/639 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMI--EILGRVGKLNHARCILLDMPKK--------GVQ 88
           AL+F +WV +      +  TH+  I   +L +     +A+ IL  + +K        GV 
Sbjct: 35  ALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVL 94

Query: 89  WDE--------DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            D          +F++LI  Y ++G+V  +V  F  M   G + SV + + +   +++  
Sbjct: 95  MDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNC 154

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R  +   +F +ML+  + P   ++N+++    +  KL+ A+     M+  G    +V+YN
Sbjct: 155 RAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYN 214

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++   +  +   A  L   M+ K I+  V +Y   I       R+     +  +M++ 
Sbjct: 215 TLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK 274

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + PN V+Y  L+ G    GK+    +V  EM+E  + P +   +  L+   C +G+   
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSP-NLITYNILINGYCINGNFEE 333

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  VL  M    +       G L+    K+  +D A  +L    E+  I R      +  
Sbjct: 334 ALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL----ERYCINRTS----LNC 385

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            S+  MI  LC NG   +A     ++ K GV  D + F+ LI G  K GN + A E++  
Sbjct: 386 ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSK 445

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           + R G   +   +  LI +  + G   +A     +M  +G +  +    S++ SL E+G+
Sbjct: 446 IYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGK 505

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           +  A   +  +   G+  N      I+      G    A    D M+  G  P+   + S
Sbjct: 506 LVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGS 565

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCI---IDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           LL VL +      A KLL       CI   +D  SY  ++  +  +G  L A  +  +++
Sbjct: 566 LLKVLCKGQNFWEARKLLK---KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMI 622

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADI-LSRMIRGEM 651
           +   + D  +   +++GL +EG    A I L R+++ E+
Sbjct: 623 QNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEI 661



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 133/587 (22%), Positives = 236/587 (40%), Gaps = 50/587 (8%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL     +E  G+   D  T+   I+ L R  +      +L  M  K +  +E  +  LI
Sbjct: 229 ALVLIHHMECKGI-QADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             + K+G +  + ++F+ M +L +  ++ +Y+ L       G +  A R  + M +  + 
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVR 347

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   T   +L G + S K + A    E       SL+ +++  MI+G  R   +DEA +L
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQL 407

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM +  + P +I+++ +I G+  V   + A  +  ++      PN V ++ L+   C 
Sbjct: 408 LIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCK 467

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPT-- 335
            G + E  K    M        DN     L+   C++G L  A + L  + R+  +P   
Sbjct: 468 VGNVYEAMKFYAAM-NLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSV 526

Query: 336 --------------------------EAGH------YGILIENFCKAEMYDRAIKLLDKL 363
                                       GH      YG L++  CK + +  A KLL KL
Sbjct: 527 TFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL 586

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
                       L ++  SYN +I  +  +G   +A   F ++++  +L D   +  ++ 
Sbjct: 587 --------HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILS 638

Query: 423 GHSKEGNPDSAFEIV-KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
           G  +EG    AF  + ++M +  +  ++  Y C I+   + G+   A      M E G S
Sbjct: 639 GLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLS 698

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
                  S+ +     G+V +AS ++     K V  NL     +L        +      
Sbjct: 699 LDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKL 758

Query: 542 IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
            +LM +SG  PN   + SL+  L   G     +K+L   +     ID
Sbjct: 759 YNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTID 805



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 135/615 (21%), Positives = 257/615 (41%), Gaps = 49/615 (7%)

Query: 2   AERAWTTRLQNKIRALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           A   W+   Q     + P     N++ +VL      + A+     +ER G +     ++ 
Sbjct: 156 AHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNG-YVPTIVSYN 214

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            ++    + G+   A  ++  M  KG+Q D   + + I+S  +     +   +   M+  
Sbjct: 215 TLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK 274

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
            +  +  SY+ L    ++ G+  +A R FN+M+   + P   TYN+++ G+ ++   E A
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA 334

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +R  + M++  +  + VT  T++NG  +  K D A  +             IS+T MI G
Sbjct: 335 LRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDG 394

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV-ERYIPP 299
                  D+A ++  EM    V P+ +T++ L+ G C  G + + ++V+ ++  E ++P 
Sbjct: 395 LCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVP- 453

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            +N +F  L+   CK G++  A     AM       +      L+ + C+      A + 
Sbjct: 454 -NNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEF 512

Query: 360 LDKLVEKEIILRPQS-TLDM----------------------------EASSYNPMIQHL 390
           L  +    I L P S T D                                +Y  +++ L
Sbjct: 513 LHHI--SRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVL 570

Query: 391 CHNGQTGKAEIFFRQLMKK-----GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           C      +A    R+L+KK       +D +++N LI   SK GN   A  + + M +  +
Sbjct: 571 CKGQNFWEA----RKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNI 626

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIE-DGHSPASSLFRSVMESLFEDGRVQTAS 504
             D+  Y C++   +R+G    A   L  +++ +  +  S ++   ++ LF+ G+ + A 
Sbjct: 627 LPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAAL 686

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
            + K M EKG+  +L  +  I +     G V  A   I        +PN   F+ LL   
Sbjct: 687 YLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGY 746

Query: 562 SEKGKTIAAVKLLDF 576
           S     ++  KL + 
Sbjct: 747 SRGQDIMSCFKLYNL 761



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 125/636 (19%), Positives = 264/636 (41%), Gaps = 37/636 (5%)

Query: 62   MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
            +I    +VG +N A+ ++  + ++G   +  +F  LI +  K G V E++K +  M   G
Sbjct: 426  LINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNG 485

Query: 122  VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
                  + ++L   +   G+ + A+ + + +   G+ P   T++ ++ G+        A 
Sbjct: 486  QNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAF 545

Query: 182  RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              F+ M S G      TY +++    + +   EA KL  ++    +    ISY T+I   
Sbjct: 546  SVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEI 605

Query: 242  VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                   +A+R+F+EM   ++ P++ TYT +L GL   G++V     L  ++++ I   +
Sbjct: 606  SKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLN 665

Query: 302  NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + V+   +    K+G   AA  + K M    +  +      + + + +      A  L+ 
Sbjct: 666  SIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLIS 725

Query: 362  KLVEKEII---------------------------LRPQSTLDMEASSYNPMIQHLCHNG 394
            K   K +I                           L  +S       +Y+ +I  LC++G
Sbjct: 726  KTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHG 785

Query: 395  QTGKAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
                     +  + +   +D + FN LIR   +  + D   ++   M    V  D D   
Sbjct: 786  MLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQK 845

Query: 454  CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
             + +  +R+    +    +  M++ G  P S  + ++M+ +   G +Q A ++   MV  
Sbjct: 846  AVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVAL 905

Query: 514  GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAA 570
            G+  +      ++  L + G +EEA+  +  M++   +P    F +L+ V  +K     A
Sbjct: 906  GISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEA 965

Query: 571  VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
              L          +D+ +Y  ++ A  A G  + A     +I +KG + +  +   L++ 
Sbjct: 966  HNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSA 1025

Query: 631  LNQEGNTKQADILSR------MIRGEMSRGSQKEKK 660
            ++ +    + +I+ +      ++ G +   SQK  +
Sbjct: 1026 ISTKHYVSRGEIVLKDLNDRGLVSGYLDGKSQKSCR 1061


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 141/588 (23%), Positives = 274/588 (46%), Gaps = 53/588 (9%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F VLI+ Y + G +  +V++ + MK  G    + +Y+ L     + G    AK+   ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
              +EP   TY  ++  +  S  LE A+  +++M  + +  DVVTY  ++NG  +  K++
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 214 EAEKLFAEMKEKNIEPT-----------------------------------VISYTTMI 238
           EA+ +F EM+E  + P                                    V+ YT ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G      A++A  +F  +    + PN VTY+AL+ G C  G + + + +L+EM E++I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +  V+  ++    K G LN A DV++ M++ +I      YG LI+ + KA+    A+ 
Sbjct: 260 P-NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 359 LLDKLVEKEIILRPQSTLDMEASSY--NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           L  ++  +           +E +++  +  + +L  +G+  +A+  F+ +M +G+L D V
Sbjct: 319 LFKEMKSR----------GLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRV 368

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            + +++ G  K G    AF I + M  +    D  AY  LI    + G+  ++++    M
Sbjct: 369 NYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGM 427

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            + G +P S+ F +++ +  ++G +  A +++  M   G+K N      +++ L   G +
Sbjct: 428 RQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487

Query: 536 EEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL---DFCLGRDCIIDLASYEKV 592
           E+ +  ++ M+  G  P   +  +VL    K+  A  +L   D  +G    +DL++Y  +
Sbjct: 488 EKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTL 547

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +      G    A  +   +M KG + D  + + LI G     + K+A
Sbjct: 548 ISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 244/509 (47%), Gaps = 21/509 (4%)

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
           R+ N      I  +   +NV++ G+  + ++  A+   E MK+ G + D+VTYNT++NG+
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +   +  A+KL  E+   N+EP VI+YTT+I  Y   +  +DAL ++DEM    + P+ 
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VTYT ++ GLC +GK+ E + V REM E  + P   S +  L+    K G++  A  +  
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFS-YATLIDSLFKEGNVAEAFVLQG 181

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+   I  +   Y  L++   KA M + A  +   L+E+ ++  P         +Y+ +
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV--PNCV------TYSAL 233

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I   C  G   K E+  +++ +K +  + + +++++ G++K+G  + A ++++ M +R +
Sbjct: 234 IDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI 293

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             +   Y  LI+ Y +  +   A      M   G    + +  S + +L   GR++ A  
Sbjct: 294 LPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNFDSLLSVLS 562
           + K M+ +G+  +      +++     G   +A      M +  S   V  ++ L++ L 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 563 EKGKTIAAVKLLDFCLGRDCI---IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           + GK  +      F  G   +    D A++  +++A    G   NA  +L ++   G   
Sbjct: 414 KLGKYESE----SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 620 DWKSSDKLIAGLNQEGNT-KQADILSRMI 647
           +  + + L+  L   G   K  D+L+ M+
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDML 498



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 206/460 (44%), Gaps = 18/460 (3%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           + RSV+ ++ L     R G    A      M +EG  P   TYN ++ GF     L TA 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +   ++    +  +V+TY T+I+ Y + + +++A  ++ EM  K++ P V++YT ++ G 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               + ++A  +F EM+   V PN  +Y  L+  L   G + E   +   MV R I   D
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI-GFD 191

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             V+  L+    K+G  N A D+ + ++  S+      Y  LI+  CK    ++   LL 
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNL 420
           ++ EK I   P   +      Y+ ++      G   +A    R+++++ +L  V  +  L
Sbjct: 252 EMEEKHIF--PNVIV------YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G+ K      A ++ K M  RG+  +       + +  R G   +A      M+  G 
Sbjct: 304 IDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK--ILEALLMRGHVEEA 538
            P    + S+M+  F+ G+   A  + + M EK      D+VA   ++  L   G  E  
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK--SSGFDVVAYNVLINGLFKLGKYESE 421

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
                 M Q G  P+   F+++++   ++G    A+KLL+
Sbjct: 422 SFHTG-MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 130/587 (22%), Positives = 255/587 (43%), Gaps = 14/587 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+   +   L  A  +  +M  K +  D   +  ++    K G V+E+  +F  M
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +++GV  +  SY  L   + + G    A     +M+  GI      Y  ++ G F +   
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A   F+ +    +  + VTY+ +I+G+ +   +++ E L  EM+EK+I P VI Y+++
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + GY      ++A+ +  +M   ++ PN   Y  L+ G   A +      + +EM  R +
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
             ++N V    +    +SG +  A ++ K M+   +  +  +Y  +++ F KA     A 
Sbjct: 329 -EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            +  ++ EK       S  D+ A  YN +I  L   G+  ++E F   + + G+  D   
Sbjct: 388 NIAQEMTEK------SSGFDVVA--YNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSAT 438

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN +I  + KEGN  +A +++  M   G+  ++     L++     GE       L+ M+
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDML 498

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P  +  ++V+++  +  R          +V  GVK +L     ++      G + 
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558

Query: 537 EALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
            A      MM  G    +  +++L+           A  +    L      ++ +Y  +L
Sbjct: 559 RATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILL 618

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             L AA     A  ++ ++ E+G V +  + D L++G  + GN K+ 
Sbjct: 619 GGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKEC 665



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/565 (21%), Positives = 232/565 (41%), Gaps = 67/565 (11%)

Query: 14  IRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           +++LVP    +  + N L  +   E A   FR +E  G+   +R ++  +I+ L + G +
Sbjct: 115 VKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVV-PNRFSYATLIDSLFKEGNV 173

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
             A  +   M  +G+ +D  ++  L++   K G+   +  +F ++ +  +  +  +Y AL
Sbjct: 174 AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSAL 233

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
                + G     +    +M  + I P    Y+ ++ G+     L  A+     M  R I
Sbjct: 234 IDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI 293

Query: 193 SLDVVTYNTMINGY-----------------------------------NRFKKMDEAEK 217
             +V  Y T+I+GY                                    R  +M+EA++
Sbjct: 294 LPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           LF +M  + + P  ++YT+M+ G+    +  DA  I  EM       + V Y  L+ GL 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             GK  E +     M +  + P D++ F  ++   CK G+L  A  +L  M    +   +
Sbjct: 414 KLGK-YESESFHTGMRQLGLAP-DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNS 471

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLV----------------------EKEIILRPQST 375
               IL++  C A   ++ + LL+ ++                        ++IL     
Sbjct: 472 ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQ 531

Query: 376 L-----DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
           L      ++ S+YN +I   C  G   +A + F+ +M KG+L D + +N LI G+    +
Sbjct: 532 LVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSH 591

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
              AF +   M   GV  + + Y  L+          +A   ++ M E G  P ++ +  
Sbjct: 592 LKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDI 651

Query: 490 VMESLFEDGRVQTASRVMKSMVEKG 514
           ++    + G ++   ++   M+ KG
Sbjct: 652 LVSGHGKIGNMKECVKLYCEMITKG 676



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 1/282 (0%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G+  D   F  +I +Y K+G +  ++K+ + MK  G++ +  + + L + +   G 
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
                   N ML  G  PT  T+  +L     S + +  +   + +   G+ LD+ TYNT
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNT 546

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+ + R   +  A  +F +M  K I   +I+Y  +I GY        A  +  +M +  
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V PN  TY  LL GL  A  + E   ++ +M ER + P + + +  L+    K G++   
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVP-NATTYDILVSGHGKIGNMKEC 665

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
             +   MI      +   Y +LI  F K +   +A +L+ ++
Sbjct: 666 VKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 137/290 (47%), Gaps = 1/290 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   MI    + G L +A  +L +M   G++ +     +L++     G +++++ + 
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M  +G   +  ++ A+     +  R  +     ++++  G++    TYN ++  F   
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRL 554

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A   F+DM  +GI  D++TYN +I+GY     + +A  + ++M  + + P V +Y
Sbjct: 555 GMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETY 614

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G  A     +A  + ++MK   + PNA TY  L+ G    G M E  K+  EM+ 
Sbjct: 615 NILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMIT 674

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
           +   PK  + +  L+    K   ++ A ++++ M    IP  +  Y ILI
Sbjct: 675 KGFVPKTRT-YNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 131/287 (45%), Gaps = 1/287 (0%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + N      N  +AL+    ++  GL  +    ++ +++ L   G++     +L DM 
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI-LVQRLCAAGEIEKTMDLLNDML 498

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
             G        + ++++  K       +   D +  +GV+  + +Y+ L     R G   
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F  M+ +GI     TYN ++ G+ +S  L+ A      M + G+S +V TYN ++
Sbjct: 559 RATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILL 618

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            G +  + + EA  L  +MKE+ + P   +Y  ++ G+  +    + ++++ EM +    
Sbjct: 619 GGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFV 678

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           P   TY  L+       KM + +++++EM  R IPP  ++  + + G
Sbjct: 679 PKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 225/476 (47%), Gaps = 23/476 (4%)

Query: 41  QFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
           +FF+ +  AG+      T+  MI+ L + G L  AR +   M + G   D   +  LI+ 
Sbjct: 42  KFFKDMGAAGI-KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 100

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
           +GK G++ E + IF+ MK    +  V +Y+AL     +  R   A  + ++M + G++P 
Sbjct: 101 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 160

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
             TY+  +  F     L+ AI+FF DM+   ++ +  TY ++I+   +   + EA KL  
Sbjct: 161 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 220

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           E+ +  I+  V++YT ++ G     R  +A  +F  M +  V PN  TYTAL+ G   A 
Sbjct: 221 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 280

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           +M   + +L+EM E+ I P D  ++  +L   C    L  A  ++  +    I T A  Y
Sbjct: 281 EMEYAKDILKEMKEKCIKP-DLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 339

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             L++ + K+     A+ LL+++++                    ++  LC N     A+
Sbjct: 340 TTLMDAYFKSGQATEALTLLEEMLD--------------------LVDGLCKNNCFEVAK 379

Query: 401 IFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
             F +++ KG++ D +A+  LI G+ K GN   A  +   M   G+  D  AY  LI   
Sbjct: 380 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 439

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
              G+   A+  LD MI  G  P   ++  +++  +  G+V  A  +   M ++G+
Sbjct: 440 SHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 223/480 (46%), Gaps = 35/480 (7%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+    K G    S K F  M   G++RSV +Y+ +   + + G   MA+  F +M   G
Sbjct: 27  LLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG 86

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P   TYN ++ G      L+  I  FE MK      DV+TYN +IN + +F++M +A 
Sbjct: 87  FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 146

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +   EMK   ++P V++Y+T I  +       +A++ F +M+   + PN  TYT+L+   
Sbjct: 147 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 206

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           C AG + E  K++ E+++  I  K N V +  LL   C+ G +  A +V +AM+   +  
Sbjct: 207 CKAGNLAEALKLVEEILQAGI--KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 264

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  L+  F KA+  + A  +L ++ EK I  +P   L      Y  ++  LC+  +
Sbjct: 265 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCI--KPDLLL------YGTILWGLCNESR 316

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA-------------------FE 435
             +A++   ++ + G+  + V +  L+  + K G    A                   FE
Sbjct: 317 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFE 376

Query: 436 IVKI----MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           + K     M  +G+  D  AY  LI+  ++ G   +A    D MIE G       + +++
Sbjct: 377 VAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALI 436

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
             L   G+VQ A  ++  M+ KGV  +  +   +++     G V+EAL   + M + G +
Sbjct: 437 WGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 496



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/520 (22%), Positives = 248/520 (47%), Gaps = 29/520 (5%)

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
           +++E+ + F  M++  V    +S +AL   + + GR  +++++F  M + GI+ +  TYN
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
           +M+        LE A   F  MK  G + D+VTYN++I+G+ +   +DE   +F +MK+ 
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
           + +P VI+Y  +I  +   ER   A     EMK+  +KPN VTY+  +   C  G + E 
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            K   +M    + P + + +  L+   CK+G+L  A  +++ +++  I      Y  L++
Sbjct: 181 IKFFVDMRRVALTPNEFT-YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRP--QSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
             C+            ++ E E + R    + +     +Y  ++       +   A+   
Sbjct: 240 GLCEE----------GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDIL 289

Query: 404 RQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           +++ +K +  D + +  ++ G   E   + A  ++  +   G+  +A  Y  L+++Y + 
Sbjct: 290 KEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKS 349

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G+  +A T L+ M++            +++ L ++   + A ++   M++KG+  +    
Sbjct: 350 GQATEALTLLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAY 397

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLG 579
             +++  +  G+++EAL   D M++ G    +  + +L+  LS  G+   A  LLD  +G
Sbjct: 398 TALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIG 457

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           +  + D   Y  ++    A GK   A  +  ++ ++G +T
Sbjct: 458 KGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 497



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 200/473 (42%), Gaps = 20/473 (4%)

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           LE A   F  M+   +     + N +++  ++  + D + K F +M    I+ +V +Y  
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI         + A  +F +MK     P+ VTY +L+ G    G + E   +  +M +  
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
             P D   +  L+   CK   +  A + L  M    +      Y   I+ FCK  M   A
Sbjct: 122 CDP-DVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           IK    +  + + L P         +Y  +I   C  G   +A     ++++ G+ L+ V
Sbjct: 181 IKFFVDM--RRVALTPNEF------TYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 232

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +  L+ G  +EG    A E+ + M   GV  + + Y  L+  +++  E   AK  L  M
Sbjct: 233 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 292

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            E    P   L+ +++  L  + R++ A  ++  + E G+  N  +   +++A    G  
Sbjct: 293 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 352

Query: 536 EEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
            EAL  ++ M+          L+  L +      A KL D  L +  + D  +Y  ++D 
Sbjct: 353 TEALTLLEEML---------DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDG 403

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            +  G    A ++  +++E G   D  +   LI GL+  G  ++A ++L  MI
Sbjct: 404 NMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMI 456


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 141/588 (23%), Positives = 274/588 (46%), Gaps = 53/588 (9%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F VLI+ Y + G +  +V++ + MK  G    + +Y+ L     + G    AK+   ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
              +EP   TY  ++  +  S  LE A+  +++M  + +  DVVTY  ++NG  +  K++
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 214 EAEKLFAEMKEKNIEPT-----------------------------------VISYTTMI 238
           EA+ +F EM+E  + P                                    V+ YT ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G      A++A  +F  +    + PN VTY+AL+ G C  G + + + +L+EM E++I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +  V+  ++    K G LN A DV++ M++ +I      YG LI+ + KA+    A+ 
Sbjct: 260 P-NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 359 LLDKLVEKEIILRPQSTLDMEASSY--NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           L  ++  +           +E +++  +  + +L  +G+  +A+  F+ +M +G+L D V
Sbjct: 319 LFKEMKSR----------GLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRV 368

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            + +++ G  K G    AF I + M  +    D  AY  LI    + G+  ++++    M
Sbjct: 369 NYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGM 427

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            + G +P S+ F +++ +  ++G +  A +++  M   G+K N      +++ L   G +
Sbjct: 428 RQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487

Query: 536 EEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL---DFCLGRDCIIDLASYEKV 592
           E+ +  ++ M+  G  P   +  +VL    K+  A  +L   D  +G    +DL++Y  +
Sbjct: 488 EKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTL 547

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +      G    A  +   +M KG + D  + + LI G     + K+A
Sbjct: 548 ISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 244/509 (47%), Gaps = 21/509 (4%)

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
           R+ N      I  +   +NV++ G+  + ++  A+   E MK+ G + D+VTYNT++NG+
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +   +  A+KL  E+   N+EP VI+YTT+I  Y   +  +DAL ++DEM    + P+ 
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VTYT ++ GLC +GK+ E + V REM E  + P   S +  L+    K G++  A  +  
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFS-YATLIDSLFKEGNVAEAFVLQG 181

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+   I  +   Y  L++   KA M + A  +   L+E+ ++  P         +Y+ +
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV--PNCV------TYSAL 233

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I   C  G   K E+  +++ +K +  + + +++++ G++K+G  + A ++++ M +R +
Sbjct: 234 IDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI 293

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             +   Y  LI+ Y +  +   A      M   G    + +  S + +L   GR++ A  
Sbjct: 294 LPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNFDSLLSVLS 562
           + K M+ +G+  +      +++     G   +A      M +  S   V  ++ L++ L 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 563 EKGKTIAAVKLLDFCLGRDCI---IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           + GK  +      F  G   +    D A++  +++A    G   NA  +L ++   G   
Sbjct: 414 KLGKYESE----SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 620 DWKSSDKLIAGLNQEGNT-KQADILSRMI 647
           +  + + L+  L   G   K  D+L+ M+
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDML 498



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 206/460 (44%), Gaps = 18/460 (3%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           + RSV+ ++ L     R G    A      M +EG  P   TYN ++ GF     L TA 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +   ++    +  +V+TY T+I+ Y + + +++A  ++ EM  K++ P V++YT ++ G 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               + ++A  +F EM+   V PN  +Y  L+  L   G + E   +   MV R I   D
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI-GFD 191

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             V+  L+    K+G  N A D+ + ++  S+      Y  LI+  CK    ++   LL 
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNL 420
           ++ EK I   P   +      Y+ ++      G   +A    R+++++ +L  V  +  L
Sbjct: 252 EMEEKHIF--PNVIV------YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G+ K      A ++ K M  RG+  +       + +  R G   +A      M+  G 
Sbjct: 304 IDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK--ILEALLMRGHVEEA 538
            P    + S+M+  F+ G+   A  + + M EK      D+VA   ++  L   G  E  
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK--SSGFDVVAYNVLINGLFKLGKYESE 421

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
                 M Q G  P+   F+++++   ++G    A+KLL+
Sbjct: 422 SFHTG-MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 130/587 (22%), Positives = 256/587 (43%), Gaps = 14/587 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+   +   L  A  +  +M  K +  D   +  ++    K G V+E+  +F  M
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +++GV  +  SY  L   + + G    A     +M+  GI      Y  ++ G F +   
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A   F+ +    +  + VTY+ +I+G+ +   +++ E L  EM+EK+I P VI Y+++
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + GY      ++A+ +  +M   ++ PN   Y  L+ G   A +      + +EM  R +
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
             ++N V    +    +SG +  A ++ K M+   +  +  +Y  +++ F KA     A 
Sbjct: 329 -EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            +  ++ EK       S  D+ A  YN +I  L   G+  ++E F   + + G+  D   
Sbjct: 388 NIAQEMTEK------SSGFDVVA--YNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSAT 438

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN +I  + KEGN  +A +++  M   G+  ++     L++     GE       L+ M+
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDML 498

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P  +  ++V+++  +  R      +   +V  GVK +L     ++      G + 
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558

Query: 537 EALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
            A      MM  G    +  +++L+           A  +    L      ++ +Y  +L
Sbjct: 559 RATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILL 618

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             L AA     A  ++ ++ E+G V +  + D L++G  + GN K+ 
Sbjct: 619 GGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKEC 665



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 121/565 (21%), Positives = 232/565 (41%), Gaps = 67/565 (11%)

Query: 14  IRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           +++LVP    +  + N L  +   E A   FR +E  G+   +R ++  +I+ L + G +
Sbjct: 115 VKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVV-PNRFSYATLIDSLFKEGNV 173

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
             A  +   M  +G+ +D  ++  L++   K G+   +  +F ++ +  +  +  +Y AL
Sbjct: 174 AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSAL 233

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
                + G     +    +M  + I P    Y+ ++ G+     L  A+     M  R I
Sbjct: 234 IDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI 293

Query: 193 SLDVVTYNTMINGY-----------------------------------NRFKKMDEAEK 217
             +V  Y T+I+GY                                    R  +M+EA++
Sbjct: 294 LPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           LF +M  + + P  ++YT+M+ G+    +  DA  I  EM       + V Y  L+ GL 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             GK  E +     M +  + P D++ F  ++   CK G+L  A  +L  M    +   +
Sbjct: 414 KLGK-YESESFHTGMRQLGLAP-DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNS 471

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLV----------------------EKEIILRPQST 375
               IL++  C A   ++ + LL+ ++                        ++IL     
Sbjct: 472 ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQ 531

Query: 376 L-----DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
           L      ++ S+YN +I   C  G   +A + F+ +M KG+L D + +N LI G+    +
Sbjct: 532 LVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSH 591

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
              AF +   M   GV  + + Y  L+          +A   ++ M E G  P ++ +  
Sbjct: 592 LKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDI 651

Query: 490 VMESLFEDGRVQTASRVMKSMVEKG 514
           ++    + G ++   ++   M+ KG
Sbjct: 652 LVSGHGKIGNMKECVKLYCEMITKG 676



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 1/282 (0%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G+  D   F  +I +Y K+G +  ++K+ + MK  G++ +  + + L + +   G 
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
                   N ML  G  PT  T+  +L     S + +  +   + +   G+ LD+ TYNT
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+ + R   +  A  +F +M  K I   +I+Y  +I GY        A  +  +M +  
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V PN  TY  LL GL  A  + E   ++ +M ER + P + + +  L+    K G++   
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVP-NATTYDILVSGHGKIGNMKEC 665

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
             +   MI      +   Y +LI  F K +   +A +L+ ++
Sbjct: 666 VKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 137/290 (47%), Gaps = 1/290 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   MI    + G L +A  +L +M   G++ +     +L++     G +++++ + 
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M  +G   +  ++ A+     +  R  +     ++++  G++    TYN ++  F   
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRL 554

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A   F+DM  +GI  D++TYN +I+GY     + +A  + ++M  + + P V +Y
Sbjct: 555 GMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETY 614

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G  A     +A  + ++MK   + PNA TY  L+ G    G M E  K+  EM+ 
Sbjct: 615 NILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMIT 674

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
           +   PK  + +  L+    K   ++ A ++++ M    IP  +  Y ILI
Sbjct: 675 KGFVPKTRT-YNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 132/287 (45%), Gaps = 1/287 (0%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + N      N  +AL+    ++  GL  +    ++ +++ L   G++     +L DM 
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI-LVQRLCAAGEIEKTMDLLNDML 498

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
             G        + ++++  K       + + D +  +GV+  + +Y+ L     R G   
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F  M+ +GI     TYN ++ G+ +S  L+ A      M + G+S +V TYN ++
Sbjct: 559 RATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILL 618

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            G +  + + EA  L  +MKE+ + P   +Y  ++ G+  +    + ++++ EM +    
Sbjct: 619 GGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFV 678

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           P   TY  L+       KM + +++++EM  R IPP  ++  + + G
Sbjct: 679 PKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 220/459 (47%), Gaps = 15/459 (3%)

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  +L  M   GV+ D   +  LI        V ++V++   M + G+E +V  Y +L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
            +   + GR+    + F +M  +GIEP    Y  ++       K + A    + M  RG+
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             +VVTYN +IN   +   + EA  +  +M EK + P V++Y T+IKG   V   D+A+ 
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 253 IFDEMKSFD--VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           + +EM      VKPN VT+ +++ GLCD G+M +  +V R M+E      +   +  L+G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-RAMMEETGCMVNLVTYNLLIG 370

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
              +   +  A +++  M  L +  ++  Y ILI+ FCK    DRA  LL  + ++ I  
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI-- 428

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNP 430
                 + E   Y P++  +C  G   +A   F ++     LD VA++ +I G  K G+ 
Sbjct: 429 ------EPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDL 482

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
            +A E++K +   G+  DA  Y  +I  + + G+   A   L  M   G  P  ++F S+
Sbjct: 483 KTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSL 542

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
           ++     G +     +++ M+ K    N+ L +KI+  L
Sbjct: 543 IQGYSTKGEINKVLELIREMITK----NIALDSKIISTL 577



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 241/540 (44%), Gaps = 57/540 (10%)

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE---GIEPTRHTYN 165
           E+  + D +  +   R   SY+ +   + RRG +  A      M  E      P   +Y 
Sbjct: 63  EATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYT 119

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
           V++         + A+     M+S G+  DVVTY T+I G     ++D+A +L  EM E 
Sbjct: 120 VLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES 179

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            IEP V+ Y+++++GY    R +D  ++F EM    ++P+ V YT L+  LC  GK  + 
Sbjct: 180 GIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKA 239

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
             V+  MV R + P +   +  L+   CK G +  A  VLK M    +  +   Y  LI+
Sbjct: 240 HGVMDMMVRRGLEP-NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIK 298

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA------ 399
                   D A+ LL+++V  + I++P         ++N +IQ LC  G+  +A      
Sbjct: 299 GLSDVLEMDEAMWLLEEMVRGKNIVKPNVV------TFNSVIQGLCDIGRMRQAFQVRAM 352

Query: 400 --------EIFFRQLMKKGVL----------------------DPVAFNNLIRGHSKEGN 429
                    +    L+  G+L                      D   ++ LI+G  K   
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ 412

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL-FR 488
            D A +++  M  RG+  +   YI L+ +   +G    A+   + M  D + P   + + 
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYS 470

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           +++    + G ++TA  ++KS+V++G+  +    + ++      G +E A G +  M  S
Sbjct: 471 TMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTAS 530

Query: 549 GSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA--GKTL 603
           G +P+   FDSL+   S KG+    ++L+   + ++  +D      +  +L+A+  GK L
Sbjct: 531 GFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKAL 590



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 166/358 (46%), Gaps = 20/358 (5%)

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT---EAGHYGILIENFCKAEMYDRA 356
           +D   +  +L   C+ GH + A  +L+AM     P     A  Y +L+   C   + D+A
Sbjct: 75  RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
           + LL  +          + +  +  +Y  +I+ LC   +  KA     ++ + G+ +P  
Sbjct: 135 VGLLRSM--------RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGI-EPNV 185

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +++L++G+ K G  +   ++   M  +G+  D   Y  LI+S  + G+   A   +D 
Sbjct: 186 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+  G  P    +  ++  + ++G V+ A  V+K M EKGV  ++     +++ L     
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305

Query: 535 VEEALGRIDLMMQSGSV--PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           ++EA+  ++ M++  ++  PN   F+S++  L + G+   A ++        C+++L +Y
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTY 365

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
             ++  LL   K   A  ++ ++   G   D  +   LI G  +     +A D+LS M
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 116/281 (41%), Gaps = 45/281 (16%)

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--------VAFNNLIRGHSKEGNP 430
           +A SYN ++  LC  G   +A    R +     L+P        V++  L+R    +   
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAM----SLEPHPACRPNAVSYTVLMRALCADRLA 131

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D A  +++ M   GV  D   Y  LI       E   A   +  M E G  P   ++ S+
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           ++   + GR +   +V   M EKG++ ++ +   ++++L   G  ++A G +D+M++ G 
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 551 VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
            PN                                + +Y  +++ +   G    A  +L 
Sbjct: 252 EPN--------------------------------VVTYNVLINCMCKEGSVKEAIGVLK 279

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGE 650
           K+ EKG   D  + + LI GL+      +A  +L  M+RG+
Sbjct: 280 KMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 217/465 (46%), Gaps = 41/465 (8%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +L +M K G+Q +   F  L+     K  + ++VK+FD M ++G E  V +Y  +  
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + + G   MA +   KM  +G +P    Y+ ++        +  A+ F  +M +RGIS 
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           +VVTY+++++G+    + +EA  LF +M E+N+ P  +++  ++ G        +A  +F
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           + M    V+PN  TY AL+ G C   +M E QK+   MV +   P   S  + + G  CK
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG-HCK 269

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK-----------AEMYDRAIKLLDKL 363
           SG ++ A  +L  M   ++  +   Y  L++ FC+            EM  R+  LL  L
Sbjct: 270 SGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM--RSYGLLPDL 327

Query: 364 VEKEIILR---PQSTLD--------MEASSYNP-------MIQHLCHNGQTGKAEIFFRQ 405
           +   I+L     Q  LD        M+ S   P       +IQ +C+ G+   A   F  
Sbjct: 328 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 387

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           L  KG+  D V +  +I G  K G  + A E+ + M   G   ++  Y  +I+ +LR G+
Sbjct: 388 LFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447

Query: 465 PADAKTALDSMIEDGHSPASSLF--------RSVMESLFEDGRVQ 501
            ++A   ++ M+  G S  SS F        R  + SLF  G  Q
Sbjct: 448 TSNAGRLIEEMVGRGFSADSSTFQMLSDLESRDEIISLFMHGSSQ 492



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 201/415 (48%), Gaps = 11/415 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A++ F  + + G +  D  T+  +I  L ++G    A  +L  M +KG + +  ++  +I
Sbjct: 66  AVKLFDEMVKMG-YEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +S  K  ++ E+++    M   G+  +V +Y ++       GR   A   F +M+   + 
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   T+N+++ G      +  A   FE M  +G+  +V TYN +++GY    +MDEA+KL
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M  K   P+V SY  +IKG+    R D+A  +  EM    + P+ VTY+ L+ G C 
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G+  + QK+L EM    + P D   +  +L   CK GHL+ A ++LKAM    I     
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLP-DLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIF 363

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y ILI+  C     + A +L   L  K I  +P      +  +Y  MI  L   G + +
Sbjct: 364 IYTILIQGMCNFGKLEAARELFSNLFVKGI--QP------DVVTYTVMISGLLKGGLSNE 415

Query: 399 AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           A   FR +   G L +   +N +I+G  + G+  +A  +++ M  RG   D+  +
Sbjct: 416 ACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTF 470



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 220/474 (46%), Gaps = 18/474 (3%)

Query: 187 MKSRGISLDVVTYNTMINGY--NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           M    I  DV T   +IN +  +       A  +   M +  ++P  ++++T++ G  + 
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            +  DA+++FDEM     +P+ +TY+ ++ GLC  G      ++L++M E+   P +  V
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKP-NVVV 119

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  ++   CK   +  A + L  M+   I      Y  ++  FC     + A  L  ++V
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRG 423
           E+ ++  P +       ++N ++  L   G   +A+  F  +++KGV   V  +N L+ G
Sbjct: 180 ERNVM--PDTV------TFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDG 231

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
           +  +   D A ++  IM R+G      +Y  LI+ + + G   +AK  L  M     +P 
Sbjct: 232 YCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPD 291

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
           +  + ++M+   +DGR Q A ++++ M   G+  +L   + +L+ L  +GH++EA   + 
Sbjct: 292 TVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLK 351

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M +S   PN   +  L+  +   GK  AA +L      +    D+ +Y  ++  LL  G
Sbjct: 352 AMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGG 411

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
            +  A  +   +   G + +  + + +I G  + G+T  A    R+I   + RG
Sbjct: 412 LSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNA---GRLIEEMVGRG 462



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 190/390 (48%), Gaps = 14/390 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           ++ + N L    ++  A+Q  + +E  G    +   +  +I+ L +   +  A   L +M
Sbjct: 85  YSTIINGLCKMGSTTMAIQLLKKMEEKGC-KPNVVVYSTIIDSLCKDKLITEAMEFLSEM 143

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  +   +  ++  +   G   E+  +F  M +  V     +++ L   + + G  
Sbjct: 144 VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMI 203

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
           + A+  F  M+ +G+EP  +TYN ++ G+    +++ A + F  M  +G +  V +YN +
Sbjct: 204 LEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNIL 263

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G+ +  ++DEA+ L AEM  K + P  ++Y+T++KG+    R  DA ++ +EM+S+ +
Sbjct: 264 IKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGL 323

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ--CKSGHLNA 320
            P+ +TY+ +L GLC  G + E  ++L+ M E  I P   ++F+  + +Q  C  G L A
Sbjct: 324 LPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP---NIFIYTILIQGMCNFGKLEA 380

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A ++   +    I  +   Y ++I    K  + + A +L   +     +  P S      
Sbjct: 381 ARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCL--PNSC----- 433

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
            +YN +IQ    NG T  A     +++ +G
Sbjct: 434 -TYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 163/320 (50%), Gaps = 7/320 (2%)

Query: 28  NVLHGAKN---SEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           ++LHG  N   S  A   F+  VER  +   D  T   +++ L + G +  A+C+   M 
Sbjct: 157 SILHGFCNLGRSNEATSLFKQMVERNVM--PDTVTFNILVDGLSKEGMILEAQCVFETMI 214

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +KGV+ + + +  L++ Y  +  + E+ K+F+IM + G   SV+SY+ L K   + GR  
Sbjct: 215 EKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRID 274

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            AK    +M  + + P   TY+ ++ GF    + + A +  E+M+S G+  D++TY+ ++
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVL 334

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G  +   +DEA +L   M+E  IEP +  YT +I+G     + + A  +F  +    ++
Sbjct: 335 DGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQ 394

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ VTYT ++ GL   G   E  ++ R+M      P   +  + + G   ++G  + A  
Sbjct: 395 PDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFL-RNGDTSNAGR 453

Query: 324 VLKAMIRLSIPTEAGHYGIL 343
           +++ M+      ++  + +L
Sbjct: 454 LIEEMVGRGFSADSSTFQML 473


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 235/490 (47%), Gaps = 18/490 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + ++I+ + K   +++++  F+ M++  V  + ++Y+ +   + +      A     +M 
Sbjct: 10  WTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMR 68

Query: 154 -SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR-GISLDVVTYNTMINGYNRFKK 211
             + + P   TY+ ++ GF    +++ A     +M +R GI+ DVVTY ++++G  R  K
Sbjct: 69  DGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGK 128

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE-MKSFDVKPNAVTYT 270
           MD A ++  EMK K +EP   +++ +I G+    + D+AL+++ E + S   KP+ VTYT
Sbjct: 129 MDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYT 188

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           AL+ G C +G + +  K+L  M  R   P +   +  LL   CK+G L+ A D+ + M  
Sbjct: 189 ALIDGFCKSGNLEKAMKMLGVMEGRKCVP-NVVTYSSLLHGLCKAGDLDQALDLFRRMTS 247

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
                    Y  LI   C A   D A  L+D++        P  T+     SYN ++   
Sbjct: 248 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT---CCPPDTV-----SYNALLDGY 299

Query: 391 CHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA-FEIVKIMGRRGVPRD 448
           C  G+  +A+  F+++  K  L D + +  L+RG       + A F +  +    G+  D
Sbjct: 300 CRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 359

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  ++  Y R     +A   +  MI    +P +  + S+++ L + GRV  A  V+K
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKG 565
           +MV K V+ ++     ++ AL   G ++EA   +  M   G  P    + +LL   S  G
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479

Query: 566 KTIAAVKLLD 575
           +   A +L +
Sbjct: 480 RMEIAYELFE 489



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 230/506 (45%), Gaps = 25/506 (4%)

Query: 23  HNLVYNVLHGAKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           ++ V N        + A +  R  V R G+   D  T+  +++ L R GK++ A  ++ +
Sbjct: 80  YSTVINGFCKQGEMDRACEILREMVTRDGI-APDVVTYTSVVDGLCRDGKMDRACEMVRE 138

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRG 140
           M  KGV+ D+  F  LI  +     V E++K++ +I+     +  V +Y AL     + G
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A +    M      P   TY+ +L G   +  L+ A+  F  M S+G   +VVTY 
Sbjct: 199 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 258

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+I+G     K+D A  L  EM      P  +SY  ++ GY  + R ++A ++F EM + 
Sbjct: 259 TLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATK 318

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+ +TYT L+ G C+A ++ E + +L  M        D   +  ++    ++     
Sbjct: 319 SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVE 378

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           AA+ ++ MI  ++   A  Y  LI+  CKA   D A+++L  +V K +        +   
Sbjct: 379 AAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV--------EPSV 430

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVK 438
            ++N +I  LC  G   +A      +   G L+P  V +  L+ G S+ G  + A+E+ +
Sbjct: 431 GTFNSVIGALCRLGDMDEAWKLLVAMAAHG-LEPGMVTYTTLLEGFSRTGRMEIAYELFE 489

Query: 439 IMGRRG---------VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
           +M ++          VP  A  +  LI    +  E   A   ++ +      PA     +
Sbjct: 490 VMRKKAKKSSSAANLVPEQA--FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLA 547

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGV 515
           +++ L   GR + A +++ S+ + G+
Sbjct: 548 IVDGLLRAGRTEEAGKLINSISKVGL 573



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 210/445 (47%), Gaps = 13/445 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+V N L  A+ +  A +  + +        D  T+  +I    + G+++ A  IL +M
Sbjct: 44  YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM 103

Query: 83  -PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
             + G+  D   +  +++   + G +  + ++   MK  GVE    ++ AL        +
Sbjct: 104 VTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARK 163

Query: 142 YMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
              A + + ++L S   +P   TY  ++ GF  S  LE A++    M+ R    +VVTY+
Sbjct: 164 VDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 223

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++++G  +   +D+A  LF  M  K   P V++YTT+I G  A  + D A  + DEM + 
Sbjct: 224 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 283

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+ V+Y ALL G C  G++ E +++ +EM  +   P D   +  L+   C +  L  
Sbjct: 284 CCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLP-DRITYTCLVRGFCNASRLEE 342

Query: 321 AADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           A  +L+ M     I  +   Y I++  + +A+ +  A + + +++ + +   P       
Sbjct: 343 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA--PN------ 394

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVK 438
           A +Y+ +I  LC  G+   A    + ++ K V   V  FN++I    + G+ D A++++ 
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 454

Query: 439 IMGRRGVPRDADAYICLIESYLRKG 463
            M   G+      Y  L+E + R G
Sbjct: 455 AMAAHGLEPGMVTYTTLLEGFSRTG 479



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/456 (22%), Positives = 204/456 (44%), Gaps = 24/456 (5%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VVT+  +I+G+ +  ++ +A   F +M+E  + P   +Y  ++ G         A  +  
Sbjct: 7   VVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKAYEVLK 65

Query: 256 EMKSF-DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           EM+    V P+ VTY+ ++ G C  G+M    ++LREMV R     D   +  ++   C+
Sbjct: 66  EMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCR 125

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G ++ A ++++ M    +  +   +  LI  +C A   D A+KL      KEI+    S
Sbjct: 126 DGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLY-----KEIL--TSS 178

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSA 433
           +   +  +Y  +I   C +G   KA ++      +K V + V +++L+ G  K G+ D A
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            ++ + M  +G   +   Y  LI       +   A+  +D M      P +  + ++++ 
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDG 298

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG-----HVEEALGRIDLMMQS 548
               GR++ A ++ K M  K       L  +I    L+RG      +EEA   ++ M  +
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSC-----LPDRITYTCLVRGFCNASRLEEARFLLENMKTA 353

Query: 549 GS----VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
                 V  +  +++  S   + + A + +   + R+   +  +Y  ++D L  AG+  +
Sbjct: 354 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDH 413

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           A  +L  ++ K       + + +I  L + G+  +A
Sbjct: 414 AMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEA 449



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 169/396 (42%), Gaps = 17/396 (4%)

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
            + +P  VT+T ++ G C A ++ +      +M E ++ P + +  + + G+ CK+   +
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGL-CKARLTS 58

Query: 320 AAADVLKAMIR-LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            A +VLK M    S+  +   Y  +I  FCK    DRA ++L ++V ++ I         
Sbjct: 59  KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAP------- 111

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
           +  +Y  ++  LC +G+  +A    R++  KGV  D   F+ LI G       D A ++ 
Sbjct: 112 DVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLY 171

Query: 438 K-IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           K I+       D   Y  LI+ + + G    A   L  M      P    + S++  L +
Sbjct: 172 KEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCK 231

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G +  A  + + M  KG   N+     ++  L     V+ A   +D M  +   P+   
Sbjct: 232 AGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVS 291

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +++LL      G+   A +L      + C+ D  +Y  ++     A +   A  +L  + 
Sbjct: 292 YNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 351

Query: 614 EKGGV-TDWKSSDKLIAGLNQEGN-TKQADILSRMI 647
              G+  D  +   ++AG ++     + A+ +  MI
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI 387


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 183/358 (51%), Gaps = 10/358 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + ++I++  K     E+  +F+ MK  G+  +V SY +L       G++  AKR FN+M+
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMV 304

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           ++G++P   T+NV++       K+  A    E M  RGI  +++TYN++I G+     ++
Sbjct: 305 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN 364

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A +LF  M  K  EP VI YT +I GY    + ++A+++++ M     +P+  TY ALL
Sbjct: 365 SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALL 424

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GL   GK+ + +K+   M + Y  P D  ++   L   CK+G L  A ++   +   +I
Sbjct: 425 TGLFQGGKVGDAKKLFGVM-KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 483

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   +  LI+  CKA   + A +L +KL        PQ  L  +  +YN MI   C  
Sbjct: 484 KLDIECFNCLIDGLCKAGKLETAWELFEKL--------PQEELQPDVVTYNIMIHEFCRG 535

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           GQ  KA I F+++ K G   D + +  LIRG  +    +   E++ +M +R V  D +
Sbjct: 536 GQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVN 593



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/543 (23%), Positives = 239/543 (44%), Gaps = 58/543 (10%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL---D 81
            ++N   G   +  A QFF  +    ++++          +L  + K+ H   +      
Sbjct: 66  FLHNCKTGNITATQAFQFFHLM----MYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQ 121

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G+  D     +L+        V E + +   + + G    + +Y  L K +    R
Sbjct: 122 MRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHR 181

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS----RGISLD-- 195
              A   F +M   G  P   TY  ++ G   +  +  A++  ++M +     GI+    
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           V++Y+ +I+   + ++ DEA  LF EMK + + PTVISYT++I G+    + ++A R+F+
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM +  V+PN VT+  L+  LC  GK++E + +L  M++R I P +   +  L+   C  
Sbjct: 302 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP-NLLTYNSLIEGFCLV 360

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G LN+A ++  +M       +   Y +LI  +CK    + A+KL + +++  +  RP   
Sbjct: 361 GDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQ--VGKRP--- 415

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAE-------------------IFFRQLMKKGVL---- 412
              +  +Y  ++  L   G+ G A+                   IF   L K G L    
Sbjct: 416 ---DVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAM 472

Query: 413 -------------DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
                        D   FN LI G  K G  ++A+E+ + + +  +  D   Y  +I  +
Sbjct: 473 ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEF 532

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            R G+   A      M ++G +P    + +++   FE  +++    ++  MV++ V  ++
Sbjct: 533 CRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592

Query: 520 DLV 522
           +++
Sbjct: 593 NIL 595



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/525 (23%), Positives = 232/525 (44%), Gaps = 32/525 (6%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A ++F+ M+     P   ++  +L G             +  M+  GIS D  T N ++N
Sbjct: 80  AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
                 ++ E   + A +  +   P +++YTT+IKG     R   A  +F  M+     P
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-----------FMKLLGVQC 313
           NA+TY  L+ GLC  G +    K+ +EM+       D+S+           +  ++   C
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLN------DSSLYGINFKPVVISYSIIIDALC 253

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K    + A D+ + M    +      Y  LI  FC    ++ A +L +++V + +  +P 
Sbjct: 254 KDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGV--QPN 311

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
                   ++N +I  LC  G+  +A+     ++++G++ + + +N+LI G    G+ +S
Sbjct: 312 ------VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNS 365

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A E+   M  +G   D   Y  LI  Y +  +  +A    + M++ G  P    + +++ 
Sbjct: 366 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLT 425

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--- 549
            LF+ G+V  A ++   M   G+  +L +    L  L   G + EA+   + +       
Sbjct: 426 GLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKL 485

Query: 550 SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
            +  F+ L+  L + GK   A +L +     +   D+ +Y  ++      G+ + A +IL
Sbjct: 486 DIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA-NIL 544

Query: 610 FKIMEKGGVT-DWKSSDKLIAGLNQEGNT-KQADILSRMIRGEMS 652
           F+ MEK G T D  +   LI G  +     K  ++L  M++ ++S
Sbjct: 545 FQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 260/529 (49%), Gaps = 30/529 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +  + + A  +  +M  +G++ +E  + +LI +  K+G++++++ +FD M+  G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +V  Y++L     ++G    A+   + M+ EG+ PT  +Y+ ++ G   +  L + +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M  RGI+ +  T+  +ING+ + KKMDEA +LF +M + N+ P  +++  MI+GY
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             V     A +++D+M    +KP+  TY +L+ GLC    + +  + + ++   Y    +
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI---------ENFCKA-- 350
            S+   L G   + G       +   M    +  +   + I++         E  C    
Sbjct: 584 FSLTALLYGFF-REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 642

Query: 351 EMYDRAIK--------LLDKLVEKEIILRPQSTLD-MEASSYNP-------MIQHLCHNG 394
           EM ++ +K        ++D L ++E +++  +  D M    Y+P       +I +LC +G
Sbjct: 643 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG 702

Query: 395 QTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
             G AE+  ++++   VL +   +N  +   + EG+ + A ++   M  +G      ++ 
Sbjct: 703 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFN 761

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI+   + G+  +A   +  + E G SP    + +++  L + G +  A  +   M+ K
Sbjct: 762 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
           G+K ++      +    + G  ++ALG    M++SG  PN+D+  ++LS
Sbjct: 822 GLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 265/598 (44%), Gaps = 13/598 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++    R+ +L  A  I  DM + G    E     +I+   KK +V+E+  + 
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 326

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             +  LG+  +V +Y+AL   + +  R+  A R F +M   G+EP   TY +++      
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A+  F+ M+ +GI + V  YN++INGY +   +D A  L + M ++ + PT  SY
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I G          + +  EM    +  N  T+TAL+ G C   KM E  ++  +M++
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P + + F  ++   C  G++  A  +   M+ + +  +   Y  LI   C      
Sbjct: 507 SNVIPNEVT-FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
           +A + +  L     +L           S   ++      G+  +    + ++  +GV LD
Sbjct: 566 KANEFVADLENSYAVL--------NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V+F  ++    K+ + + +  + + M  +GV  D   Y C+I++  ++     A    D
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+ DG+SP +     ++ +L + G + +A  + K M+   V  N       L+     G
Sbjct: 678 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737

Query: 534 HVEEALGRIDLMMQS--GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
            +E+A      M+Q    S+ +F+ L+  L + GK   A+ L+          D  SY  
Sbjct: 738 DMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 797

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           ++  L   G    A+ +  +++ KG   D  + +  I   N  G + +A  I + MIR
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 855



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 140/652 (21%), Positives = 258/652 (39%), Gaps = 68/652 (10%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           ++ T  +++  L ++ +   AR +   M + GV  DE ++   I +Y +   +  +  + 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  GV+ S   Y+ L   + +  R   A    N M++ G+     TY  +++GF   
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +LE A+R   DM   G        + MI+   + + ++EA  L  ++ +  + P V +Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT------------------------ 270
             +I      ER DDA R+F EM    ++PN VTY                         
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 271 -----------ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
                      +L+ G C  G +   + +L  MV+  + P   S +  L+   C++G L+
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS-YSPLIAGLCRNGDLS 460

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP------- 372
           +  ++ + M    I      +  LI  FCK +  D A +L DK+++  +I          
Sbjct: 461 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 520

Query: 373 --------------------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GV 411
                               +  L  +  +Y  +I  LC      KA  F   L     V
Sbjct: 521 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           L+  +   L+ G  +EG     + +   M  RGV  D  ++  ++ + L++ +   +   
Sbjct: 581 LNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVL 640

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
              M E G  P    +  ++++L ++  +  A      MV  G   N      ++  L  
Sbjct: 641 FREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCK 700

Query: 532 RGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
            G++  A      M+    +PN   ++  L   + +G    A K L   + +  +  + S
Sbjct: 701 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVS 759

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +  ++  L  AGK   A  ++ KI E G   D  S   +I  L + G+  +A
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKA 811



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 135/607 (22%), Positives = 249/607 (41%), Gaps = 90/607 (14%)

Query: 125 SVKSYDA---LFKLILRRGRYMMAKRYFNKML---------------------------- 153
           +V  Y A   LF L+  R ++ +A+  F+KML                            
Sbjct: 160 TVNQYTASQILFSLVKIR-QFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 218

Query: 154 -------SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                  SEG++ +   YNV+++G   +++++ A+     M + G++ D VTY T++ G+
Sbjct: 219 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF 278

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R ++++ A ++  +M      P+  + + MI      E  ++A  +  ++    + PN 
Sbjct: 279 CRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 338

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
             Y AL+  LC   +  +  ++ +EM  R + P + + +  L+   CK G +  A  +  
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVT-YAILIHALCKRGMIEDALCLFD 397

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M    I      Y  LI  +CK    DRA  LL  +V++         L   A+SY+P+
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE--------GLTPTAASYSPL 449

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC NG         R++ ++G+  +   F  LI G  K+   D A  +   M    V
Sbjct: 450 IAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL----------- 494
             +   +  +IE Y   G    A    D M+E G  P +  +RS++  L           
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569

Query: 495 ------------------------FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
                                   F +GR      +   M  +GVK +L     I+ A L
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            +   E++      M + G  P+   +  ++  LS++   I A+   D  +      +  
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK-SSDKLIAGLNQEGNTKQA-DILSR 645
           ++  +++ L  +G  L +  +L K M  G V   K + +  +     EG+ ++A D+ S 
Sbjct: 690 THTVLINNLCKSG-YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 748

Query: 646 MIRGEMS 652
           M++G ++
Sbjct: 749 MLQGHLA 755



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/423 (22%), Positives = 181/423 (42%), Gaps = 34/423 (8%)

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS GI   ++T + +L+      +   A   F+ M   G+ LD   Y   I  Y   + +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D A  L   M+ + ++ + + Y  ++ G     R  +A+ + + M +  V  + VTY  L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 273 LPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFM-----------KLLGVQCKSGHLNA 320
           + G C   ++    ++  +M+   ++P + N  FM           +   + CK G L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
             +V               Y  LI+  CK E +D A +L  ++  +   L P        
Sbjct: 335 VPNVFA-------------YNALIDKLCKNERFDDADRLFKEMAGRG--LEPNEV----- 374

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y  +I  LC  G    A   F ++  KG+   V  +N+LI G+ K+G+ D A  ++  
Sbjct: 375 -TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M + G+   A +Y  LI    R G+ +        M E G +  +  F +++    +D +
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 493

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
           +  A+R+   M++  V  N      ++E   + G++ +A    D M++ G  P+  +  S
Sbjct: 494 MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 553

Query: 560 VLS 562
           ++S
Sbjct: 554 LIS 556



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 8/240 (3%)

Query: 77  CILL-DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
           C+L  +M ++GV+ D+  +  +I++  K+  + +++  +D M   G   +  ++  L   
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 697

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS---RGI 192
           + + G    A+    +ML+  + P + TYN  L  F     +E A    +D+ S   +G 
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA----KDLHSAMLQGH 753

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
              +V++N +I G  +  K+ EA  L +++ E    P  ISY+T+I     +   + A  
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFE 813

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +++EM    +KP+ V Y   +      G+  +   +   M+   + P  ++    L G+ 
Sbjct: 814 LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873



 Score = 38.9 bits (89), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 31/147 (21%), Positives = 64/147 (43%), Gaps = 5/147 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L + GK+  A  ++  + + G   D   +  +I    K G + ++ ++++ M   G
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++  V +Y+   +     G    A   +  M+  G++P   TY  +L G  +SL L    
Sbjct: 823 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG--ISLMLHYDF 880

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNR 208
             F   K     + +  Y  M + +N+
Sbjct: 881 SCFRGTKQY---IQISVYELMDSTHNK 904


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 166/713 (23%), Positives = 307/713 (43%), Gaps = 102/713 (14%)

Query: 19  PQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL--KMIEILGRVGKLNHA 75
           P F  + ++   L  A+  E AL+  R ++  G   ++   HL   ++  L R G++  A
Sbjct: 177 PAFSAYTVLIGALAEARRPERALELLRQMQEVG---YEVGVHLFTTLVRALAREGQVADA 233

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             ++ ++    ++ D  ++ V I+ +GK G V  + K F  +K  G++    SY ++  +
Sbjct: 234 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWV 293

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           + + GR   A+  F +M +E   P  + YN M+ G+  + + E A +  E ++ RG    
Sbjct: 294 LCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 353

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VV++N+++    + +K+DEA  LF  MK K+ EP   +Y  +I       R ++A RI D
Sbjct: 354 VVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILD 412

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM+   + PN +T   ++  LC A K+ E  K+     +R   P D   +  L+    K 
Sbjct: 413 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP-DCVTYCSLIDGLGKK 471

Query: 316 GHLNAAADVLKAMIRLSIPTEAGH------YGILIENFCKAEMYDRAIKLLDKLVEKEII 369
           G ++ A  + + M+      +AGH      Y  LI NF      +   K+  +L+ +   
Sbjct: 472 GQVDEAYRLFEKML------DAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC- 524

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEG 428
            +P  TL       N  +  +   G+  K  + F  +   G L  V +++ LI G +K G
Sbjct: 525 -KPDLTL------LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 577

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
                  I   M ++G   DA AY  +++ + + G+   A   L+ M E    P  + + 
Sbjct: 578 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 637

Query: 489 SVMESL------------FED-----------------------GRVQTASRVMKSMVEK 513
           ++++ L            FE+                       GR+  A  +++ M++K
Sbjct: 638 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 697

Query: 514 GVKENLDLVAKILEALLMRGHVEEAL-------------------------GRIDL---- 544
           G+  N+     +L+AL+    + EAL                          R+      
Sbjct: 698 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA 757

Query: 545 ------MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
                 M + G VPN   + +++S L++ G    A  L +       I D AS+  +++ 
Sbjct: 758 FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 817

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           +  A + + AY +  +   +G   + KS   L+  LN+    +QA I+  ++R
Sbjct: 818 MSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLR 870



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/548 (21%), Positives = 232/548 (42%), Gaps = 17/548 (3%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + ++V    +M++L    +  +Y  L   +    R   A     +M   G E   H +  
Sbjct: 160 LDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTT 219

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++       ++  A+   +++K   +  D+V YN  I+ + +   +D A K F E+K + 
Sbjct: 220 LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQG 279

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           ++P  +SYT+MI       R  +A  +F +M++    P A  Y  ++ G   AG+  +  
Sbjct: 280 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 339

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           K+L  + ER   P   S F  +L    K   ++ A  + + M + + P  +  Y I+I+ 
Sbjct: 340 KLLERLRERGCIPSVVS-FNSILTCLGKKRKVDEALSLFEVMKKDAEPN-SSTYNIIIDM 397

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C     + A ++LD++          ++L     + N M+  LC   +  +A   F   
Sbjct: 398 LCLGGRVEEAYRILDEM--------EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 449

Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            ++G   D V + +LI G  K+G  D A+ + + M   G   +   Y  LI ++   G  
Sbjct: 450 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 509

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            D       +I  G  P  +L  + M+ +F+ G V+    + + +   G   ++   + +
Sbjct: 510 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 569

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           +  L   G   E       M Q G   +   +++++    + GK   A ++L+  +   C
Sbjct: 570 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE-MKEKC 628

Query: 583 I-IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           +   +A+Y  ++D L    +   AY +  +   KG   +      LI G  + G   +A 
Sbjct: 629 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 688

Query: 642 -ILSRMIR 648
            IL  M++
Sbjct: 689 LILEEMMK 696



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 207/513 (40%), Gaps = 74/513 (14%)

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           FL   L    +  E+M   G  L       +     R +++D+A    A M+     P  
Sbjct: 120 FLHHDLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAF 179

Query: 232 ISYTTMIKGYVAVERAD-----------------------------------DALRIFDE 256
            +YT +I       R +                                   DAL + DE
Sbjct: 180 SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDE 239

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           +K   ++P+ V Y   +     AG +    K   E+  + + P D S +  ++ V CK+G
Sbjct: 240 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVS-YTSMIWVLCKAG 298

Query: 317 HLNAAADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII------ 369
            L  A ++   M    S+P  A  Y  +I  +  A  ++ A KLL++L E+  I      
Sbjct: 299 RLGEAEELFAQMEAERSVPC-AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSF 357

Query: 370 ------LRPQSTLD--------------MEASSYNPMIQHLCHNGQTGKAEIFFRQL--M 407
                 L  +  +D                +S+YN +I  LC  G+  +A   +R L  M
Sbjct: 358 NSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEA---YRILDEM 414

Query: 408 KKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           +   L P  +  N ++    K    + A++I +   +RG   D   Y  LI+   +KG+ 
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 474

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            +A    + M++ GH+    ++ S++ + F  GR +   ++ K ++ +G K +L L+   
Sbjct: 475 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTY 534

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDC 582
           ++ +   G VE+     + +   G +P+  S   L+  L++ G+      +      +  
Sbjct: 535 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 594

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            +D  +Y  V+D    +GK   AY IL ++ EK
Sbjct: 595 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 247/519 (47%), Gaps = 20/519 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI    ++G++     +L     +GV  DE  +  L++ Y +KG + ++ +  D+M + G
Sbjct: 311 MINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNG 370

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +  +Y+ L      RG    A + +  ML  G+ P   + + +L GFF + K E A+
Sbjct: 371 FTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQAL 430

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             +++  +RG++ +VVT NT+ING  + ++M EAE+LF  MKE +     ++Y T+I GY
Sbjct: 431 NLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGY 490

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             +     A +I  EM++    P+   + + + GL  A +  +V  +  EM  + + P +
Sbjct: 491 CKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSP-N 549

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK G+L+ A  +   M+   +        +L+  F +    D A  +L 
Sbjct: 550 TVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQ 609

Query: 362 KLVEKEIILR-PQSTLDMEASS-----------------YNPMIQHLCHNGQTGKAEIFF 403
           KL + ++I     STL++   +                 +N +I  LC  G+   A   F
Sbjct: 610 KLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLF 669

Query: 404 RQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
             L  KG + D   +++LI G S  G+ D AF +   M    +  +   Y  LI    + 
Sbjct: 670 EDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKS 729

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
              + A +  + +   G SP +  + ++++   +DG    A ++ + M+++G++  +   
Sbjct: 730 CNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTY 789

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
             ++  L  +G++EEA+  +D M+++   PNF +  +++
Sbjct: 790 TILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLI 828



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 156/622 (25%), Positives = 282/622 (45%), Gaps = 52/622 (8%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
           HA  F + +E  GL  +    H  M +   R+G+   AR +L  +  KG+  +   + +L
Sbjct: 182 HAADFLKEMEEMGLDVNLVAYHAVM-DGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLL 240

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSV---KSYDALFKLILRRGRYMMAKRYFNKMLS 154
           ++ Y K+G ++E+ K+   +K+   E+ V    +Y AL     +RGR   A R  ++M+ 
Sbjct: 241 VKGYCKEGRMEEAEKVVKEIKE--NEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMID 298

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G++     YN M+ G+    ++    +  +  + RG++LD  +YNT+++GY R   M +
Sbjct: 299 AGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTK 358

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A +    M       T ++Y T++ G+ +    DDAL+++  M    V PN ++ + LL 
Sbjct: 359 AFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLD 418

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G   AGK  +   + +E + R +     ++   + G+ CK+  +  A ++   M   S P
Sbjct: 419 GFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL-CKNRRMTEAEELFHRMKEWSCP 477

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            ++  Y  LI+ +CK     RA ++  ++  + +   P   +      +N  I  L    
Sbjct: 478 CDSLTYRTLIDGYCKLGDLGRATQI--RIEMENLGFVPSVEM------FNSFITGLFIAK 529

Query: 395 QTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           Q+GK      ++  KG L P  V +  LI G  KEGN   A  +   M  +G+    + +
Sbjct: 530 QSGKVNDIRVEMSAKG-LSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGL--KPNLF 586

Query: 453 IC--LIESYLRKGEPADA-----KTALDSMIEDGHSPASSL----FRSVMESLFEDGRVQ 501
           IC  L+  + R+G+  +A     K A   MI+D    AS+L       ++ESL   G   
Sbjct: 587 ICSVLVSCFYREGKVDEANLVLQKLADTDMIQD--CSASTLNIGKVAHIIESL--AGGNH 642

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            ++++M ++V  G              L   G V +A    + +   G +P+   + SL+
Sbjct: 643 QSAKIMWNIVILG--------------LCKLGRVADARNLFEDLKVKGFIPDNFTYSSLI 688

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
              S  G    A  L D  L      ++ +Y  ++  L  +     A S+  K+  KG  
Sbjct: 689 HGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGIS 748

Query: 619 TDWKSSDKLIAGLNQEGNTKQA 640
            +  + + LI G  ++GNT +A
Sbjct: 749 PNAITYNTLIDGHCKDGNTTEA 770



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/559 (20%), Positives = 237/559 (42%), Gaps = 57/559 (10%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F++L+ ++   G +++++ +FD M + G  R+++S                  R  N+++
Sbjct: 97  FDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRS----------------CNRLLNQLV 140

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G                    + TA+  F+ M+  G   D  T   M   Y R  ++ 
Sbjct: 141 QAG-------------------DIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVA 181

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A     EM+E  ++  +++Y  ++ GY  + + + A ++   ++   + PN VTYT L+
Sbjct: 182 HAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLV 241

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  G+M E +KV++E+ E      D   +  L+   C+ G +  A  V   MI   +
Sbjct: 242 KGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGV 301

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS--TLDMEASSYNPMIQHLC 391
                 Y  +I  +CK          L ++ E E +L+      ++++  SYN ++   C
Sbjct: 302 QVNMFVYNTMINGYCK----------LGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYC 351

Query: 392 HNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G   KA      +++ G     + +N L+ G    G  D A ++  +M +RGV  +  
Sbjct: 352 RKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEI 411

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           +   L++ + + G+   A       +  G +       +V+  L ++ R+  A  +   M
Sbjct: 412 SCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRM 471

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS-GSVPN---FDSLLSVL--SEK 564
            E     +      +++     G +  A  +I + M++ G VP+   F+S ++ L  +++
Sbjct: 472 KEWSCPCDSLTYRTLIDGYCKLGDLGRAT-QIRIEMENLGFVPSVEMFNSFITGLFIAKQ 530

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
              +  +++     G     +  +Y  ++      G   +A  + F+++EKG   +    
Sbjct: 531 SGKVNDIRVEMSAKGLS--PNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFIC 588

Query: 625 DKLIAGLNQEGNTKQADIL 643
             L++   +EG   +A+++
Sbjct: 589 SVLVSCFYREGKVDEANLV 607



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 3/224 (1%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           +GK+ H   I+  +     Q  + M+ ++I    K G V ++  +F+ +K  G      +
Sbjct: 627 IGKVAH---IIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFT 683

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y +L       G   +A    ++MLS  + P   TYN +++G   S  +  A+  F  ++
Sbjct: 684 YSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQ 743

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           S+GIS + +TYNT+I+G+ +     EA KL  +M ++ I+PTV +YT +I G       +
Sbjct: 744 SKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYME 803

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +A+++ D+M   +V PN +TY  L+ G    G M  + K+  EM
Sbjct: 804 EAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/425 (20%), Positives = 177/425 (41%), Gaps = 40/425 (9%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + GK   A  +  +   +G+  +      +I    K   + E+ ++F  MK+        
Sbjct: 422 KAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSL 481

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y  L     + G    A +   +M + G  P+   +N  + G F++ +         +M
Sbjct: 482 TYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEM 541

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            ++G+S + VTY  +I G+ +   + +A  L+ EM EK ++P +   + ++  +    + 
Sbjct: 542 SAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKV 601

Query: 248 DDALRIFDEMKSFDVKPNA--------------------------VTYTALLPGLCDAGK 281
           D+A  +  ++   D+  +                           + +  ++ GLC  G+
Sbjct: 602 DEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGR 661

Query: 282 MVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           + + + +  ++ V+ +IP  DN  +  L+     SG ++ A  +   M+   +      Y
Sbjct: 662 VADARNLFEDLKVKGFIP--DNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTY 719

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             LI   CK+    RA+ L +KL  K I           A +YN +I   C +G T +A 
Sbjct: 720 NSLIYGLCKSCNVSRAVSLFNKLQSKGI--------SPNAITYNTLIDGHCKDGNTTEAF 771

Query: 401 IFFRQLMKKGVLDPVAFNN--LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
              ++++K+G+  P  F    LI G   +G  + A +++  M    V  +   Y  LI+ 
Sbjct: 772 KLKQKMIKEGI-QPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQG 830

Query: 459 YLRKG 463
           Y R G
Sbjct: 831 YARCG 835



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 2/214 (0%)

Query: 53  NHDRETHLKMIEILG--RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQES 110
           NH     +  I ILG  ++G++  AR +  D+  KG   D   +  LI      G +  +
Sbjct: 641 NHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLA 700

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             + D M    +  ++ +Y++L   + +      A   FNK+ S+GI P   TYN ++ G
Sbjct: 701 FGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDG 760

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
                    A +  + M   GI   V TY  +I+G      M+EA KL  +M E N++P 
Sbjct: 761 HCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPN 820

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            I+Y T+I+GY          ++++EM    + P
Sbjct: 821 FITYWTLIQGYARCGNMKAITKLYNEMHICGLLP 854


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/581 (22%), Positives = 264/581 (45%), Gaps = 52/581 (8%)

Query: 12  NKIRALVPQFDHN------LVYNVL-HGAKNSE---HALQFFRWVERAGLFNHDRETHLK 61
           NK + ++   + N      +VYNVL HG   S     AL+    + + GL          
Sbjct: 148 NKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGL---------- 197

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
              ++   GK N A  +  +M +KG+  +   + +LI+S+ ++G +  ++   D M +  
Sbjct: 198 EANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +E +V  Y++L     + G    AK YF++M+ +G+ PT  TY  ++ G+    +   A 
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + + +M ++GIS +  T+  +I+G  R   M EA +LF EMKE+ I P+ ++Y  MI+G+
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGH 377

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                  +A  + DEM      P+  TY  L+ GLC  G++ E ++ + ++ + +    +
Sbjct: 378 CRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDH-HKLN 436

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK-----------A 350
           N  +  L+   CK G    A    + M+   +  +   Y ILI+   +            
Sbjct: 437 NMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLK 496

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEAS-----------------SYNPMIQHLCHN 393
           EM++  ++  D ++   +I R     +++ +                 +Y  +I  LC  
Sbjct: 497 EMHNHGLR-PDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKA 555

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G   KAE+  ++ +   V  + + +   +   ++ GN + A ++   M  +G      +Y
Sbjct: 556 GLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATTVSY 614

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI  + R G+  +A   L  M ++   P    + +++    +   +Q A ++  +M++
Sbjct: 615 NILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLD 674

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           KG+K +    + ++    + G +E+A    D M++ G   N
Sbjct: 675 KGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSN 715



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 131/559 (23%), Positives = 239/559 (42%), Gaps = 42/559 (7%)

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +FD +    V+  +  Y A+ + +     +  AK   + M     + +   YNV++ G  
Sbjct: 118 LFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLC 177

Query: 173 LSLKLETAIRFFEDMKSRGISLDVV--------------------------TYNTMINGY 206
            S ++  A+     +  +G+  +VV                          TY+ +I+ +
Sbjct: 178 KSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSF 237

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R  +MD A     +M + +IE TV  Y ++I GY  +  A  A   FDEM    + P  
Sbjct: 238 CRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTV 297

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VTYT+L+ G C+ G+  +  KV  EM  + I P +   F  ++   C++  +  A  +  
Sbjct: 298 VTYTSLISGYCNEGEWHKAFKVYNEMTAKGISP-NTYTFTAIISGLCRANMMAEAIRLFG 356

Query: 327 AMI-RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
            M  R  +P+E   Y ++IE  C++     A  LLD++V K  +  P      +  +Y P
Sbjct: 357 EMKERKIMPSEVT-YNVMIEGHCRSGNISEAFHLLDEMVGKGFV--P------DTYTYRP 407

Query: 386 MIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I  LC  G+  +A+ F   L K    L+ + ++ L+ G+ KEG    A    ++M  RG
Sbjct: 408 LISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERG 467

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V  D   Y  LI+   R+ +       L  M   G  P + ++ ++++   + G ++ A 
Sbjct: 468 VAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAF 527

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
            +   MV++G   N+     ++  L   G +++A       + S   PN   +   L  L
Sbjct: 528 GLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHL 587

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
           +  G    AV+L    L +  +    SY  ++      GK   A  +L  + +   + D+
Sbjct: 588 TRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDY 646

Query: 622 KSSDKLIAGLNQEGNTKQA 640
            +   +I    +  N ++A
Sbjct: 647 ITYSTIIYEQCKRSNLQEA 665



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 100/459 (21%), Positives = 196/459 (42%), Gaps = 24/459 (5%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           MK   +  +V T + ++NG  RF++ ++   LF ++   N++P +  Y+ +++    ++ 
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            + A  +   M+    K + V Y  L+ GLC + ++ E  ++   ++++ +     + + 
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY- 205

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
                    G  N A  + K M    +      Y ILI++FC+    D AI  LDK+   
Sbjct: 206 ---------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMT-- 254

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGH 424
                 +++++     YN +I   C  G    A+ +F +++ KG L P  V + +LI G+
Sbjct: 255 ------KASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG-LTPTVVTYTSLISGY 307

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
             EG    AF++   M  +G+  +   +  +I    R    A+A      M E    P+ 
Sbjct: 308 CNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSE 367

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             +  ++E     G +  A  ++  MV KG   +      ++  L   G V EA   +D 
Sbjct: 368 VTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDD 427

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           + +     N   + +L+    ++G+   AV      + R   +DL  Y  ++D       
Sbjct: 428 LHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHD 487

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           T   + +L ++   G   D      +I   ++ GN K+A
Sbjct: 488 TRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEA 526



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 34/225 (15%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI- 136
           +L +M   G++ D  ++  +I+ + K G ++E+  ++DIM   G   +V +Y AL   + 
Sbjct: 494 LLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLC 553

Query: 137 ---------------------------------LRRGRYMMAKRYFNKMLSEGIEPTRHT 163
                                            L RG  M      +  + +G   T  +
Sbjct: 554 KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVS 613

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
           YN+++ GF    K+E A +    M    I  D +TY+T+I    +   + EA KL+  M 
Sbjct: 614 YNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTML 673

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
           +K ++P  ++Y+ ++ G       + A  + DEM    ++ N VT
Sbjct: 674 DKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 200/399 (50%), Gaps = 12/399 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI IL R GK   A+  +  M   GV+ +   +  +I  Y  +G  + + KIF  MK   
Sbjct: 223 MINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKN 282

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++    +Y++    + +  R   A     K+L  G+ P   TYN ++ G      L+ A 
Sbjct: 283 LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAF 342

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            + ++M +RGI   V TYN +I+     K+++EAE +  EM+EK +EP V++Y   I GY
Sbjct: 343 AYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGY 402

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                A  AL +FDEM   +++P   TYT+L+       +M E ++  ++ ++  + P D
Sbjct: 403 CRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLP-D 461

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             +F  L+   C +G+++ A  +LK M    +  +   +  L++ +C+    + A KLLD
Sbjct: 462 IIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLD 521

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
           ++ E+ I  +P         SYN +I      G    A   F +++  G  DP  + +N 
Sbjct: 522 EMKERGI--KPDHI------SYNTLISGYSKRGDMKDALEVFDEMLSLG-FDPTLLTYNA 572

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           LI+G+SK G  D A E+++ M  +G+  D   Y+ +IE+
Sbjct: 573 LIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 203/450 (45%), Gaps = 45/450 (10%)

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +++ M ++ ++ S+ +++ +  ++ R G++  AK +   M   G++P   TYN ++ G+ 
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
           L  K E A + F+ MK + +  D  TYN+ I+   + ++++EA  +  ++ E  + P  +
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y  +I G       D A    DEM +  +  +  TY  L+  L    ++ E + +++EM
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
            E+ + P                       DV+              Y I I  +C+   
Sbjct: 384 REKGVEP-----------------------DVVT-------------YNIQINGYCRCGN 407

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
             +A+ L D++VEK I  RP         +Y  +I       +  +AE  F++ +K+G+L
Sbjct: 408 AKKALSLFDEMVEKNI--RPT------VETYTSLIDVFGKRNRMSEAEEKFKKSIKEGML 459

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D + FN LI GH   GN D AF+++K M    V  D   +  L++ Y R+ +  +AK  
Sbjct: 460 PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKL 519

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           LD M E G  P    + +++    + G ++ A  V   M+  G    L     +++    
Sbjct: 520 LDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSK 579

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
            G  + A   +  M   G  P+  + L V+
Sbjct: 580 IGEADHAEELLREMQSKGITPDDSTYLYVI 609



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 141/255 (55%), Gaps = 5/255 (1%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           A +F ++   H   +E      ++  A  ++ +M +KGV+ D   + + I  Y + G  +
Sbjct: 355 ASVFTYNLLIHALFLE-----KRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAK 409

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           +++ +FD M +  +  +V++Y +L  +  +R R   A+  F K + EG+ P    +N ++
Sbjct: 410 KALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALI 469

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G  ++  ++ A +  ++M +  +  D VT+NT++ GY R +K++EA+KL  EMKE+ I+
Sbjct: 470 DGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIK 529

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P  ISY T+I GY       DAL +FDEM S    P  +TY AL+ G    G+    +++
Sbjct: 530 PDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEEL 589

Query: 289 LREMVERYIPPKDNS 303
           LREM  + I P D++
Sbjct: 590 LREMQSKGITPDDST 604



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/463 (22%), Positives = 205/463 (44%), Gaps = 16/463 (3%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
            + ++ +++ Y +F+K DEA +    MKE  I P   +  +++   + + +   A  +++
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM   ++K + VT+  ++  LC  GK  + +  +  M E Y    +   +  ++   C  
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHM-EVYGVKPNVVTYNTVINGYCLR 265

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G   AA+ + K M   ++  +   Y   I   CK    + A  +L KL+E        S 
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLE--------SG 317

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
           L   A +YN +I   C+ G   KA  +  ++M +G++  V  +N LI     E   + A 
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           +++K M  +GV  D   Y   I  Y R G    A +  D M+E    P    + S+++  
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            +  R+  A    K  +++G+  ++ +   +++   + G+++ A   +  M  +  VP+ 
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             F++L+     + K   A KLLD    R    D  SY  ++      G   +A  +  +
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           ++  G      + + LI G ++ G   +AD    ++R   S+G
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIG---EADHAEELLREMQSKG 597



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 157/332 (47%), Gaps = 2/332 (0%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A + F+ ++   L   D  T+   I  L +  ++  A  +L  + + G+  +   +  
Sbjct: 269 EAASKIFKTMKDKNL-KPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI+    KG + ++    D M   G+  SV +Y+ L   +    R   A+    +M  +G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +EP   TYN+ + G+      + A+  F++M  + I   V TY ++I+ + +  +M EAE
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           + F +  ++ + P +I +  +I G+      D A ++  EM +  V P+ VT+  L+ G 
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGY 507

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   K+ E +K+L EM ER I P D+  +  L+    K G +  A +V   M+ L     
Sbjct: 508 CRERKVEEAKKLLDEMKERGIKP-DHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
              Y  LI+ + K    D A +LL ++  K I
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKGI 598



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 182/407 (44%), Gaps = 13/407 (3%)

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           ++ EM + NI+ +++++  MI       +   A      M+ + VKPN VTY  ++ G C
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             GK     K+ + M ++ + P D   +   +   CK   +  A+ VL  ++   +   A
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKP-DCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y  LI+  C     D+A    D+++ + I+            +YN +I  L    +  
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIV--------ASVFTYNLLIHALFLEKRIE 374

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +AE   +++ +KGV  D V +N  I G+ + GN   A  +   M  + +    + Y  LI
Sbjct: 375 EAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           + + ++   ++A+      I++G  P   +F ++++    +G +  A +++K M    V 
Sbjct: 435 DVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVV 494

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            +      +++       VEEA   +D M + G  P+   +++L+S  S++G    A+++
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
            D  L       L +Y  ++      G+  +A  +L ++  KG   D
Sbjct: 555 FDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPD 601


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 215/462 (46%), Gaps = 12/462 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  ++  ++++L + GKLN AR +LLDM   G+  + + F +L+  Y K G ++E+ ++ 
Sbjct: 246 DNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVI 305

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D+M Q  V   V +Y+ L   + + G+   A R  ++M +  + P   TYN ++ G F  
Sbjct: 306 DLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDC 365

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
                     + M+ +G+  + VTYN ++  Y +  KMD A     +M+E    P  +++
Sbjct: 366 SSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTF 425

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I GY    R  +A R+ DEM    +K N+VT   +L  LC   K+ +  K+L    +
Sbjct: 426 NTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK 485

Query: 295 R-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           R Y    D   +  L+    K G    A  +   M    I      Y  +I   C +   
Sbjct: 486 RGYFV--DEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKT 543

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-L 412
           D++I  L++L+E  ++  P  T      +YN +I   C  GQ  KA  F  +++KK    
Sbjct: 544 DQSIDKLNELLESGLV--PDET------TYNTIILGYCREGQVEKAFQFHNKMVKKSFKP 595

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D    N L+RG   EG  D A ++      +G   DA  Y  +I    ++    +A   L
Sbjct: 596 DLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLL 655

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
             M E    P    + +++ +L + GR++ A   M  +VE+G
Sbjct: 656 AEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQG 697



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 240/537 (44%), Gaps = 56/537 (10%)

Query: 49  AGLFNHDRETHLK--------MIEILGRVGK---LNHARCILLDMPKKGVQWDEDMFEVL 97
           A +FN  +  HLK        +I  L R      +  ++ I  D+ K GV+ + + F +L
Sbjct: 159 AQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNIL 218

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           I     +  + E++ +   MK         SY+ +  ++ ++G+   A+     M + G+
Sbjct: 219 IYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGL 278

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
            P R+T+N+++ G+     L+ A +  + M    +  DV TYN +I G  +  K+DEA +
Sbjct: 279 LPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFR 338

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           L  EM+   + P V++Y T+I G      +     + D+M+   VKPNAVTY  ++    
Sbjct: 339 LKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYV 398

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR------- 330
             GKM      LR+M E    P D   F  L+   CK+G L+ A  ++  M R       
Sbjct: 399 KEGKMDNAGNELRKMEESGFSP-DCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457

Query: 331 ----------------------LSIPTEAGH------YGILIENFCKAEMYDRAIKLLDK 362
                                 LS  ++ G+      YG LI  + K      A+KL D+
Sbjct: 458 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDE 517

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
           + EKEII  P         +YN MI  LCH+G+T ++     +L++ G++ D   +N +I
Sbjct: 518 MKEKEII--PSII------TYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTII 569

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G+ +EG  + AF+    M ++    D      L+     +G    A    ++ I  G +
Sbjct: 570 LGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKA 629

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
             +  + +++  L ++ R + A  ++  M EK +  +      IL AL   G ++EA
Sbjct: 630 IDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEA 686



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/585 (21%), Positives = 261/585 (44%), Gaps = 61/585 (10%)

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR---R 139
           P K VQ    + +  I +Y        + +IF+ MK+L ++ ++ + + L   ++R   +
Sbjct: 131 PFKKVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSK 190

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI------------------ 181
               ++K  F+ ++  G++   +T+N++++G  +  KL  AI                  
Sbjct: 191 PSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSY 250

Query: 182 -----------------RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
                                DMK+ G+  +  T+N +++GY +   + EA ++   M +
Sbjct: 251 NTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQ 310

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
            N+ P V +Y  +I G     + D+A R+ DEM++  + P+ VTY  L+ G  D    ++
Sbjct: 311 NNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLK 370

Query: 285 VQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
             +++ +M  + + P  N+V +  ++    K G ++ A + L+ M       +   +  L
Sbjct: 371 GFELIDKMEGKGVKP--NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTL 428

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I  +CKA     A +++D++  K         L M + + N ++  LC   +   A    
Sbjct: 429 INGYCKAGRLSEAFRMMDEMSRK--------GLKMNSVTLNTILHTLCGERKLDDAYKLL 480

Query: 404 RQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
               K+G  +D V++  LI G+ K+G    A ++   M  + +      Y  +I      
Sbjct: 481 SSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHS 540

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G+   +   L+ ++E G  P  + + +++     +G+V+ A +    MV+K  K +L   
Sbjct: 541 GKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTC 600

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL----D 575
             +L  L   G +++AL   +  +  G   +   +++++S L ++ +   A  LL    +
Sbjct: 601 NILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEE 660

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
             LG DC     +Y  +L AL  AG+   A   + +I+E+G + D
Sbjct: 661 KKLGPDCY----TYNAILSALADAGRMKEAEEFMSRIVEQGKLQD 701



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 209/451 (46%), Gaps = 16/451 (3%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL---RI 253
           V  +T I  Y    +   A ++F  MK  +++P +++  T+I   V             I
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F ++    VK N  T+  L+ G C   K+ E   ++ +M +    P DN  +  +L V C
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFP-DNVSYNTILDVLC 258

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G LN A D+L  M    +      + IL+  +CK      A +++D + +  ++  P 
Sbjct: 259 KKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVL--P- 315

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
                +  +YN +I  LC +G+  +A     ++    +L D V +N LI G     +   
Sbjct: 316 -----DVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLK 370

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
            FE++  M  +GV  +A  Y  +++ Y+++G+  +A   L  M E G SP    F +++ 
Sbjct: 371 GFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLIN 430

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
              + GR+  A R+M  M  KG+K N   +  IL  L     +++A   +    + G   
Sbjct: 431 GYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFV 490

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +   + +L+    + GK++ A+KL D    ++ I  + +Y  ++  L  +GKT  +   L
Sbjct: 491 DEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKL 550

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +++E G V D  + + +I G  +EG  ++A
Sbjct: 551 NELLESGLVPDETTYNTIILGYCREGQVEKA 581


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 144/635 (22%), Positives = 285/635 (44%), Gaps = 46/635 (7%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           +++ F+W      + H  + +  +I+ LG  G+      +L+ M ++G+ + E +F +++
Sbjct: 94  SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIM 153

Query: 99  ESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           + YG+ G+  ++ ++  D+      E + +SY+ +  ++L      +    F +MLS+GI
Sbjct: 154 KHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGI 213

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
            PT +T+ V++    L  ++++A    +DM   G   + + Y T+I+   +  +++E  K
Sbjct: 214 SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLK 273

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           L  EM      P V ++   I G   + R  +A ++ D M      PN+ TY  L+ GLC
Sbjct: 274 LLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLC 333

Query: 278 DAGKMVEVQKVLRE-----------MVERYIP---------------------PKDNSVF 305
             GK+ E + +L +           ++  Y+                      P   +  
Sbjct: 334 RMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 393

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             +LG+ CK G+L +A +++  M           Y ILI+ FCK    + A  +LD++  
Sbjct: 394 TLILGL-CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
           K         L + A  YN +I  LC + +   A   F  +  KG   D   FN+LI G 
Sbjct: 453 K--------GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 504

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K    + A  + + M   GV  +   Y  LI ++LR+G   +A   ++ M+  G     
Sbjct: 505 CKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 564

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             +  ++++L   G ++    + + M+ KG+  N      ++  L   G+++ AL  +  
Sbjct: 565 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 624

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M+  G  P+   ++SL++ L + G+   A+ L D         D  +Y  ++      G 
Sbjct: 625 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 684

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
             +A+ +L + ++ G + +  +   L++   +EG+
Sbjct: 685 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 216/452 (47%), Gaps = 27/452 (5%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGL--FNHDRETHLKMIEILGRVGKLNHARCIL 79
           D N   + +HG        +  + V+R  L  F  +  T+  ++  L R+GK++ AR +L
Sbjct: 286 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 345

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILR 138
             +P   V     +F  LI  Y  +G + E+  +  + M  +G    + +Y+ L   + +
Sbjct: 346 NKVPNPNVV----LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 401

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           +G  + A+   N+M  +G EP   TY +++  F    +LE A    ++M  +G++L+ V 
Sbjct: 402 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 461

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN +I+   + +K+ +A  +F +M  K  +P + ++ ++I G   V + ++AL ++ +M 
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
              V  N +TY  L+      G M E  K++ +M+ R   P D+  +  L+   C++G++
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC-PLDDITYNGLIKALCRAGNI 580

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
                + + M+   +        ILI   C+      A++ L  ++ +         L  
Sbjct: 581 EKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHR--------GLTP 632

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
           +  +YN +I  LC  G+  +A   F +L  +G+  D + +N LI  H KEG  D A    
Sbjct: 633 DIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA---- 688

Query: 438 KIMGRRGV-----PRDADAYICLIESYLRKGE 464
            ++  RGV     P +   YI L+ +++++G+
Sbjct: 689 HLLLSRGVDSGFIPNEVTWYI-LVSNFIKEGD 719



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 20/239 (8%)

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS---VMESLFE 496
           M + G+      +I +++ Y R G P  A   L  M   G       FRS   V++ L  
Sbjct: 137 MKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM--RGVYSCEPTFRSYNVVLDVLLA 194

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
               +    V   M+ KG+   +     +++AL +   V+ A   +  M + G VPN   
Sbjct: 195 GNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIV 254

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           + +L+  L + G+    +KLL+  L   CI D+ ++   +  L    +   A  ++ +++
Sbjct: 255 YQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRML 314

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADIL------------SRMIRGEMSRGSQKEKK 660
            +G   +  +   L+ GL + G   +A +L            + +I G +SRG   E K
Sbjct: 315 LRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAK 373


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 199/431 (46%), Gaps = 23/431 (5%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++  +I+S  K G   ++  +F  M++ G+   + +Y+++       GR+  A++   +M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L   I P   TYN ++  F    K   A   +++M  RGI  + +TYN+MI+G+ +  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D AE +F  M  K   P V ++TT+I GY   +R DD + +  EM    +  N VTY  L
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G +     + ++M+   + P D      LL   C +G L  A ++ KAM +  
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCP-DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 333 IPTEAGH-----------YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
           +  +A H           Y ILI        +  A +L +++  + I+  P +       
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV--PDTI------ 547

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKI 439
           +Y+ MI  LC   +  +A   F  +  K    P  V FN LI G+ K G  D   E+   
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFVSMGSKS-FSPNVVTFNTLINGYCKAGRVDDGLELFCE 606

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           MGRRG+  DA  YI LI  + + G    A      MI  G  P +   R+++   +    
Sbjct: 607 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 666

Query: 500 VQTASRVMKSM 510
           ++ A  +++ +
Sbjct: 667 LERAVAMLEDL 677



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 228/506 (45%), Gaps = 33/506 (6%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L R G++  A  +L  M + G+Q  +  +  +++   KKG    ++ +   M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 118 KQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           +++  +  +V  Y A+   + + GR+  A+  F +M  +GI P   TYN M+ GF  S +
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A +  ++M  R IS DVVTYN +IN + +  K  EA +L+ EM  + I P  I+Y +
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNS 365

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI G+   +R D A  +F  M +    P+  T+T L+ G C A ++ +  ++L EM  R 
Sbjct: 366 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 425

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +   +   +  L+   C  G LNAA D+ + MI   +  +      L++  C       A
Sbjct: 426 LV-ANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 484

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA 416
           +++   +         +S +D++AS  +P       NG                  D + 
Sbjct: 485 LEMFKAM--------QKSKMDLDAS--HPF------NGVEP---------------DVLT 513

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N LI G   EG    A E+ + M  RG+  D   Y  +I+   ++    +A     SM 
Sbjct: 514 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMG 573

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
               SP    F +++    + GRV     +   M  +G+  +  +   ++      G++ 
Sbjct: 574 SKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNIN 633

Query: 537 EALGRIDLMMQSGSVPNFDSLLSVLS 562
            AL     M+ SG  P+  ++ ++L+
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLT 659



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/506 (23%), Positives = 210/506 (41%), Gaps = 57/506 (11%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M +K ++ D   F +LI+ +     +  ++  F  + +LG+   V ++  L   +    R
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A  +F++M      P   T+  ++ G     ++  A+   + M   G+    +TY T
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 202 MING----------YNRFKKMDE--------------------------AEKLFAEMKEK 225
           +++G           N  +KM+E                          A+ LF EM+EK
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I P + +Y +MI G+ +  R  DA ++  EM    + P+ VTY AL+      GK  E 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            ++  EM+ R I P +   +  ++   CK   L+AA D+   M       +   +  LI+
Sbjct: 345 AELYDEMLPRGIIP-NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
            +C A+  D  ++LL ++        P+  L     +YN +I   C  G    A    +Q
Sbjct: 404 GYCGAKRIDDGMELLHEM--------PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-----------RGVPRDADAYI 453
           ++  GV  D V  N L+ G    G    A E+ K M +            GV  D   Y 
Sbjct: 456 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 515

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI   + +G+  +A+   + M   G  P +  + S+++ L +  R+  A+++  SM  K
Sbjct: 516 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 575

Query: 514 GVKENLDLVAKILEALLMRGHVEEAL 539
               N+     ++      G V++ L
Sbjct: 576 SFSPNVVTFNTLINGYCKAGRVDDGL 601



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/546 (21%), Positives = 244/546 (44%), Gaps = 27/546 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           +++++ +F  M +     SV  +  L  +++R  R  +    + KM  + I    +++N+
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    KL  A+  F  +   G+  DVVT+ T+++G     ++ EA   F +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             P V+++TT++ G     R  +A+ + D M    ++P  +TY  ++ G+C  G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 287 KVLREM--VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +LR+M  V   IP  +  ++  ++   CK G  + A ++   M    I  +   Y  +I
Sbjct: 240 NLLRKMEEVSHIIP--NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             FC +  +  A +LL +++E++I   P      +  +YN +I      G+  +A   + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKI--SP------DVVTYNALINAFVKEGKFFEAAELYD 349

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++ +G++ + + +N++I G  K+   D+A ++  +M  +G   D   +  LI+ Y    
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 409

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              D    L  M   G    +  + +++      G +  A  + + M+  GV  ++    
Sbjct: 410 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 469

Query: 524 KILEALLMRGHVEEALGRIDLMMQS-----------GSVPN---FDSLLSVLSEKGKTIA 569
            +L+ L   G +++AL     M +S           G  P+   ++ L+  L  +GK + 
Sbjct: 470 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 529

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A +L +    R  + D  +Y  ++D L    +   A  +   +  K    +  + + LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 589

Query: 630 GLNQEG 635
           G  + G
Sbjct: 590 GYCKAG 595



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 119/491 (24%), Positives = 217/491 (44%), Gaps = 27/491 (5%)

Query: 170 GFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
           GF     LE AI  F DM +SR +   VV +  ++    R ++ D    L+ +M+ K I 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLP-SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
             + S+  +IK + +  +   AL  F ++    + P+ VT+T LL GLC   ++ E    
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             +M E    P +   F  L+   C+ G +  A  +L  M+   +      YG +++  C
Sbjct: 172 FHQMFETTCRP-NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A+ LL K+ E   I+ P   +      Y+ +I  LC +G+   A+  F ++ +
Sbjct: 231 KKGDTVSALNLLRKMEEVSHII-PNVVI------YSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KG+  D   +N++I G    G    A ++++ M  R +  D   Y  LI +++++G+  +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A    D M+  G  P +  + S+++   +  R+  A  +   M  KG   ++     +++
Sbjct: 344 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                  +++ +  +  M + G V N   +++L+      G   AA+ L    +      
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 463

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEK------------GGVTDWKSSDKLIAGLN 632
           D+ +   +LD L   GK  +A   +FK M+K            G   D  + + LI GL 
Sbjct: 464 DIVTCNTLLDGLCDNGKLKDALE-MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 522

Query: 633 QEGNTKQADIL 643
            EG   +A+ L
Sbjct: 523 NEGKFLEAEEL 533



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 87/176 (49%)

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           P  GV+ D   + +LI     +G   E+ ++++ M   G+     +Y ++   + ++ R 
Sbjct: 503 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A + F  M S+   P   T+N ++ G+  + +++  +  F +M  RGI  D + Y T+
Sbjct: 563 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 622

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           I G+ +   ++ A  +F EM    + P  I+   M+ G+ + E  + A+ + ++++
Sbjct: 623 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 5/168 (2%)

Query: 25  LVYNVLHGAKNSE----HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           L YN+L     +E     A + +  +   G+   D  T+  MI+ L +  +L+ A  + +
Sbjct: 512 LTYNILICGLINEGKFLEAEELYEEMPHRGIV-PDTITYSSMIDGLCKQSRLDEATQMFV 570

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M  K    +   F  LI  Y K G V + +++F  M + G+      Y  L     + G
Sbjct: 571 SMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 630

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
               A   F +M+S G+ P   T   ML GF+   +LE A+   ED++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 70/154 (45%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK   A  +  +MP +G+  D   +  +I+   K+  + E+ ++F  M       +V ++
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 584

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     + GR       F +M   GI      Y  +++GF     +  A+  F++M S
Sbjct: 585 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 644

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
            G+  D +T   M+ G+   ++++ A  +  +++
Sbjct: 645 SGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 228/490 (46%), Gaps = 10/490 (2%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           K ++ A  F R +   GL   +  T   +I  L R G+L     +L++M +KG   DE  
Sbjct: 32  KRTDEAFGFLRSMGLKGL-EPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVT 90

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  L+  Y K+G   +++ +   M + G+  +V +Y +L   + + G    A  +F++M 
Sbjct: 91  YNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMH 150

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+ P   TY  ++ GF     L+ A R   +M   G    +VTYN +ING+    +M+
Sbjct: 151 VRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRME 210

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  L  +M  K + P V+SY+T+I G+   +  D A ++  EM    V P+AVTY++L+
Sbjct: 211 EAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLI 270

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC+  ++ E   + +EM+   +PP D   +  L+   CK G LN A  +   MI+   
Sbjct: 271 QGLCEQRRLTEACDMFQEMLTIKLPP-DEFTYTTLINAYCKEGDLNKALHLHDEMIQKGF 329

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP-------QSTLDMEASSYNPM 386
             +A  Y +LI    K      A +LL KL   + I          ++  ++E  S   +
Sbjct: 330 LPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVAL 389

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           ++  C  G   +A+  F  ++ K    +   +N +I GH + GN   A+++ K M     
Sbjct: 390 VKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDF 449

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
                  + L+++   +G   +    +  ++       + L + ++E   ++G +     
Sbjct: 450 VPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFN 509

Query: 506 VMKSMVEKGV 515
           ++  M + G+
Sbjct: 510 LLTEMAKDGL 519



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/508 (22%), Positives = 231/508 (45%), Gaps = 34/508 (6%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
            L+FF+ +ER G    +  T+  MI+   ++ + + A   L  M  KG++ +   F ++I
Sbjct: 2   GLRFFKEMERNGCL-PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
               + G ++E+ ++   M + G      +Y+ L     + G +  A     +M+  G+ 
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TY  ++     +  L  A+ FF+ M  RG+  +  TY T+ING+ +   +DEA ++
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM      P++++Y  +I G+  + R ++A+ +  +M    V P+ V+Y+ ++ G   
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
             ++    ++  EM+ + + P D   +  L+   C+   L  A D+ + M+ + +P +  
Sbjct: 241 NQELDRAFQMKVEMIGKSVLP-DAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEF 299

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI  +CK    ++A+ L D++++K  +  P      +A +YN +I  L    ++ +
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGFL--P------DAVTYNVLINGLNKQARSKE 351

Query: 399 A-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A  +  +      +   V +N LI     E   +  F+               + + L++
Sbjct: 352 ARRLLLKLFYDDSIPSAVTYNTLI-----ENCCNIEFK---------------SAVALVK 391

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
            +  KG   +A    +SMI   H P  +++  ++      G V  A ++ K MV      
Sbjct: 392 GFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVP 451

Query: 518 NLDLVAKILEALL---MRGHVEEALGRI 542
           +   V  +++AL    M G + E +G I
Sbjct: 452 HTVTVLALVKALFTEGMDGELNEVIGDI 479



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 123/525 (23%), Positives = 227/525 (43%), Gaps = 29/525 (5%)

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           M  R+F +M   G  P   TYN M+ G+    + + A  F   M  +G+  +++T+N +I
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG  R  ++ E  ++  EM  K   P  ++Y T++ GY        AL +  EM    + 
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           PN VTYT+L+  +C AG +    +   +M  R + P + + +  ++    + G L+ A  
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERT-YTTIINGFAQQGLLDEAYR 179

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           VL  M R         Y  LI   C     + AI LL  +V K ++  P      +  SY
Sbjct: 180 VLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVL--P------DVVSY 231

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           + +I     N +  +A     +++ K VL D V +++LI+G  ++     A ++ + M  
Sbjct: 232 STIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLT 291

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
             +P D   Y  LI +Y ++G+   A    D MI+ G  P +  +  ++  L +  R + 
Sbjct: 292 IKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKE 351

Query: 503 ASRVM---------------KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
           A R++                +++E            +++   M+G ++EA    + M+ 
Sbjct: 352 ARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMIN 411

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
               PN   ++ ++      G  + A KL    +  D +    +   ++ AL   G    
Sbjct: 412 KNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGE 471

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
              ++  I+    +TD + S  L+    +EGN     ++L+ M +
Sbjct: 472 LNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAK 516


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 200/425 (47%), Gaps = 18/425 (4%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L ++G    A  +L  M +KG + +   +  +I+S  K  +V E++  F
Sbjct: 44  DVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFF 103

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M + G+   V +Y ++       GR   A   F +M+   + P + T+ +++ G    
Sbjct: 104 SEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKK 163

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A   FE M  +G+  DV TYN +++GY    +MDEA+KLF  M  K   P V SY
Sbjct: 164 RMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSY 223

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I G+    R D+A  +  EM    + P+  TY+ L+ G C  G+  E Q++L+EM  
Sbjct: 224 NILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCS 283

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P   +  + L G+ CK GHL+ A ++LKAM    I      Y ILIE  C     +
Sbjct: 284 YGLLPNLITYSIVLDGL-CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLE 342

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A +L   L  K I    Q T+     +Y  MI  L   G + +A   FR++   G L +
Sbjct: 343 AARELFSNLFVKGI----QPTV----VTYTVMISGLLKGGLSNEACELFREMAVNGCLPN 394

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL--------IESYLRKGEP 465
              +N +I+G  + G+  +A  +++ M  +G   D+  +  L        I S   +G  
Sbjct: 395 SCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDLESSDEIISQFMRGSS 454

Query: 466 ADAKT 470
            D KT
Sbjct: 455 QDRKT 459



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 197/435 (45%), Gaps = 29/435 (6%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K G+Q     F  L+     K  + ++VK+FD M ++G E  V +Y  +   + + G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             MA +   KM  +G +P    YN ++        +  A+ FF +M   GI  DV TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G+    +++EA  LF +M E+N+ P  +++T +I G        +A  +F+ M    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           ++P+  TY AL+ G C   +M E QK+   M  +   P   S +  L+   CKSG ++ A
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRS-YNILINGHCKSGRIDEA 239

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK---------LVEKEIIL-- 370
             +L  M   S+  +   Y  L+  FC+      A +LL +         L+   I+L  
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 371 ----------------RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
                             +S ++     Y  +I+ +C  G+   A   F  L  KG+   
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359

Query: 415 -VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +  +I G  K G  + A E+ + M   G   ++  Y  +I+ +LR G+  +A   ++
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIE 419

Query: 474 SMIEDGHSPASSLFR 488
            M+  G S  SS FR
Sbjct: 420 EMVGKGFSADSSTFR 434



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 203/434 (46%), Gaps = 10/434 (2%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M +LG++ ++ +++ L   +  + + M A + F++M+  G EP   TY+ ++ G      
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A++  + M+ +G   +VV YNT+I+   + + + EA   F+EM ++ I P V +Y++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++ G+  + R ++A  +F +M   +V PN VT+T L+ GLC    + E   V   M E+ 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P D   +  L+   C    ++ A  +   M R         Y ILI   CK+   D A
Sbjct: 181 LEP-DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
             LL ++  K        +L  +  +Y+ +++  C  G+  +A+   +++   G+L + +
Sbjct: 240 KGLLAEMSHK--------SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLI 291

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            ++ ++ G  K G+ D AFE++K M    +  +   Y  LIE     G+   A+    ++
Sbjct: 292 TYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNL 351

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
              G  P    +  ++  L + G    A  + + M   G   N      I++  L  G  
Sbjct: 352 FVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDT 411

Query: 536 EEALGRIDLMMQSG 549
             A+  I+ M+  G
Sbjct: 412 PNAVRLIEEMVGKG 425



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 193/418 (46%), Gaps = 13/418 (3%)

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           ++PT++++ T++ G  +  +  DA+++FDEM     +P+ +TY+ ++ GLC  G      
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           ++L++M E+   P +   +  ++   CK   +  A D    M++  IP +   Y  ++  
Sbjct: 66  QLLKKMEEKGCKP-NVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
           FC     + A  L  ++VE+ +I  P         ++  +I  LC      +A + F  +
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVI--PNKV------TFTILIDGLCKKRMISEAWLVFETM 176

Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            +KG+  D   +N L+ G+      D A ++  IM R+G   +  +Y  LI  + + G  
Sbjct: 177 TEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRI 236

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            +AK  L  M     +P    + ++M    + GR Q A  ++K M   G+  NL   + +
Sbjct: 237 DEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIV 296

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           L+ L   GH++EA   +  M +S   PN   +  L+  +   GK  AA +L      +  
Sbjct: 297 LDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGI 356

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              + +Y  ++  LL  G +  A  +  ++   G + +  + + +I G  + G+T  A
Sbjct: 357 QPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNA 414



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 137/269 (50%), Gaps = 6/269 (2%)

Query: 28  NVLHGAKN----SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           ++LHG  N    +E    F + VER  + N  + T   +I+ L +   ++ A  +   M 
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPN--KVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +KG++ D   +  L++ Y  +  + E+ K+F+IM + G   +V+SY+ L     + GR  
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            AK    +M  + + P   TY+ ++ GF    + + A    ++M S G+  +++TY+ ++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G  +   +DEA +L   M+E  IEP +  YT +I+G     + + A  +F  +    ++
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           P  VTYT ++ GL   G   E  ++ REM
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREM 386


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 156/644 (24%), Positives = 295/644 (45%), Gaps = 27/644 (4%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAKNSE---HALQFFRWVERAGLFNHDRETHLKMIEI 65
           R + + RA  P  +     +V+H  ++++    AL+ FR   R     H   +   M+E+
Sbjct: 75  RARVQPRAPPPCDERRAAEDVIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLEL 134

Query: 66  L---GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           +   GRVG +     +   M ++ V+ +   F  +    G +G ++ +     +MK+ G+
Sbjct: 135 MRGHGRVGDMAE---VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGI 191

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             +  +Y+ L   +++ G    A   +  M+ +G+ P+  TY+V++  F     +ET + 
Sbjct: 192 VLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 251

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
              +M++ G+  +V +Y   I    + K+ DEA ++ A+M+ +  +P VI++T +I+   
Sbjct: 252 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC 311

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKD 301
              R  DA  +F +MK  D KP+ VTY  LL    D G    V ++   M  + Y    D
Sbjct: 312 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGY---ND 368

Query: 302 NSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           N V +  ++   C+ G +  A ++   M +  I  E   Y  LI  F KA+ +  A++L 
Sbjct: 369 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 428

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
             +     I  P+        ++   I +   +G++ KA   +  +  KG++ D VA N 
Sbjct: 429 KHM----DIHGPKPN----GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 480

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           ++ G +K G    A  +   +   GV  D   Y  +I+   +  +  +A      MIE+ 
Sbjct: 481 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 540

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P      S++++L++ GR   A R+   + E  ++        +L  L   G V+E +
Sbjct: 541 CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 600

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             ++ M  S   PN   ++++L  L + G    A+ +L     + CI DL+SY  V+  L
Sbjct: 601 HLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 660

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +   +   A+SI F  M+K  + D+ +   ++    + G  K+A
Sbjct: 661 VKEERYNEAFSI-FCQMKKVLIPDYATLCTILPSFVKIGLMKEA 703



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 158/658 (24%), Positives = 290/658 (44%), Gaps = 53/658 (8%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           H ++  VL  A     A   F W  +      DR T++ +++  G  G       I   M
Sbjct: 303 HTVLIQVLCDAGRISDAKDVF-WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 361

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G   +   +  +I++  + G V E++++FD MKQ G+     SY++L    L+  R+
Sbjct: 362 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRF 421

Query: 143 MMAKRYFNKMLSEGIEPTRHTY-----------------------------------NVM 167
             A   F  M   G +P  +T+                                   N +
Sbjct: 422 GDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 481

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           L+G   S +L  A R F ++K+ G+S D +TY  MI   ++  K DEA K+F +M E N 
Sbjct: 482 LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 541

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P V++  ++I       R D+A RIF ++K  +++P   TY  LL GL   GK+ EV  
Sbjct: 542 VPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 601

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +L EM     PP +   +  +L   CK+G +N A D+L +M       +   Y  +I   
Sbjct: 602 LLEEMYHSNYPP-NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 660

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP--MIQHLCHNGQTGKAEIFFRQ 405
            K E Y+ A  +  ++  K++++   +TL     S+    +++   H       + +F Q
Sbjct: 661 VKEERYNEAFSIFCQM--KKVLIPDYATLCTILPSFVKIGLMKEALH-----IIKDYFLQ 713

Query: 406 LMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC-LIESYLRKGE 464
              K   D  + ++L+ G  K+   + + E  +I+   G+  D D ++C LI+   ++ +
Sbjct: 714 PGSK--TDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLD-DFFLCPLIKHLCKQKK 770

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +A   +      G S  + L+ S++  L ++  +  A  +   M E G   +      
Sbjct: 771 ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 830

Query: 525 ILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           +L+A+     +EE L   + M + G   +   +++++S L +  +   A+ L    + + 
Sbjct: 831 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 890

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
                 +Y  +LD LL AG+  +A ++  +++E G   +    + L+ G    GNT++
Sbjct: 891 FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEK 948



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 143/632 (22%), Positives = 277/632 (43%), Gaps = 30/632 (4%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + + +   VL  AK  + A +    +E  G    D  TH  +I++L   G+++ A+ +  
Sbjct: 266 YSYTICIRVLGQAKRFDEAYRILAKMENEGC-KPDVITHTVLIQVLCDAGRISDAKDVFW 324

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M K   + D   +  L++ +G  G  Q  ++I++ MK  G   +V +Y A+   + + G
Sbjct: 325 KMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVG 384

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A   F++M  +GI P +++YN ++ GF  + +   A+  F+ M   G   +  T+ 
Sbjct: 385 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 444

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
             IN Y +  +  +A + +  MK K I P V++   ++ G     R   A R+F E+K+ 
Sbjct: 445 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 504

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+ +TYT ++     A K  E  K+  +M+E    P D      L+    K+G  + 
Sbjct: 505 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP-DVLAVNSLIDTLYKAGRGDE 563

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +   +  +++    G Y  L+    +       + LL+++          S      
Sbjct: 564 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY--------HSNYPPNL 615

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +YN ++  LC NG    A      +  KG + D  ++N +I G  KE   + AF I   
Sbjct: 616 ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 675

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTAL-DSMIEDGHSPASSLFRSVMESLFEDG 498
           M +  +P D      ++ S+++ G   +A   + D  ++ G     S   S+ME + +  
Sbjct: 676 MKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKA 734

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA------LGRIDLMMQSGSVP 552
            ++ +    + +   G+  +   +  +++ L  +    EA           + +++G   
Sbjct: 735 GIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL-- 792

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            ++SL+  L ++     A  L        C  D  +Y  +LDA+   GK++    +L K+
Sbjct: 793 -YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIEEML-KV 847

Query: 613 ME----KGGVTDWKSSDKLIAGLNQEGNTKQA 640
            E    KG  + + + + +I+GL +    +QA
Sbjct: 848 QEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 879



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 225/535 (42%), Gaps = 76/535 (14%)

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           + I  YGK G   ++++ +++MK  G+   V + +A+   + + GR  MAKR F+++ + 
Sbjct: 445 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 504

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G+ P   TY +M+     + K + A++ F DM       DV+  N++I+   +  + DEA
Sbjct: 505 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 564

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            ++F ++KE N+EPT  +Y T++ G     +  + + + +EM   +  PN +TY  +L  
Sbjct: 565 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 624

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC  G + +   +L  M  +   P  +S    + G+  K    N A  +   M ++ IP 
Sbjct: 625 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL-VKEERYNEAFSIFCQMKKVLIPD 683

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD-------ME--------- 379
            A    IL  +F K  +   A+ ++     K+  L+P S  D       ME         
Sbjct: 684 YATLCTIL-PSFVKIGLMKEALHII-----KDYFLQPGSKTDRSSCHSLMEGILKKAGIE 737

Query: 380 ---------ASS--------YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLI 421
                    ASS          P+I+HLC   +  +A    ++    GV L    +N+LI
Sbjct: 738 KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLI 797

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI----------------ESYLRKGEP 465
            G   E   D A  +   M   G   D   Y  L+                E   RKG  
Sbjct: 798 CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 857

Query: 466 ADAKT----------------ALD---SMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
           +   T                A+D   +++  G SP    +  +++ L + GR++ A  +
Sbjct: 858 STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 917

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
              M+E G K N  +   +L    + G+ E+       M+  G  P+  S   ++
Sbjct: 918 FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 113/543 (20%), Positives = 218/543 (40%), Gaps = 46/543 (8%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + H L  N    +  S  A+Q +  ++  G+   D      ++  L + G+L  A+ +  
Sbjct: 441 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVP-DVVAGNAVLFGLAKSGRLGMAKRVFH 499

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           ++   GV  D   + ++I+   K     E+VKIF  M +      V + ++L   + + G
Sbjct: 500 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 559

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A R F ++    +EPT  TYN +L G     K++  +   E+M       +++TYN
Sbjct: 560 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 619

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++   +   +++A  +   M  K   P + SY T+I G V  ER ++A  IF +MK  
Sbjct: 620 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 679

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+  T   +LP     G M E   ++++   +     D S    L+    K   +  
Sbjct: 680 LI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK 738

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           + +  + +    I  +      LI++ CK +    A +L+ K     + L+         
Sbjct: 739 SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK--------T 790

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG----------VLDP---------------- 414
             YN +I  L        AE  F ++ + G          +LD                 
Sbjct: 791 GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 850

Query: 415 ----------VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
                     V +N +I G  K    + A ++   +  +G       Y  L++  L+ G 
Sbjct: 851 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 910

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             DA+   + M+E G     +++  ++      G  +    + + MV++G+  ++     
Sbjct: 911 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 970

Query: 525 ILE 527
           I++
Sbjct: 971 IID 973


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 133/559 (23%), Positives = 253/559 (45%), Gaps = 45/559 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ ++ +      +   F   +   V  +V++Y+ L K++ ++G +   +     M 
Sbjct: 116 FNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMW 175

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+ P R TY  ++ G   S  L  A+  F++M+ RG+  DVV YN +I+G+  FK+ D
Sbjct: 176 GAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGF--FKRGD 233

Query: 214 --EAEKLFAE-MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
             +A +++   ++E+ + P+V+SY  MI G     R  + L I++ MK  + K +  TY+
Sbjct: 234 FVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYS 293

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           AL+ GL +AG +   +KV  EMV R + P D      +L   CK+G++    ++ + M +
Sbjct: 294 ALIHGLSEAGDLGGARKVYEEMVGRGVRP-DVVTCNAMLNGLCKAGNVEECFELWEEMGK 352

Query: 331 LS------------------------------IPTEAGHYGILIENFCKAEMYDRAIKLL 360
            S                              +  ++  YG+++   C     +RA+++L
Sbjct: 353 CSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVL 412

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
           ++   +E        +D++  +Y+ +I  LC  G+  +A+     + K+G   +    N 
Sbjct: 413 EEAEHRE------GGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNV 466

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  K    DSA ++ + M  +G      +Y  LI   LR     +A   ++ M+E G
Sbjct: 467 LIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKG 526

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    + +++  L+E   +  A R+    ++ G K ++ +   ++  L   G VE+AL
Sbjct: 527 WKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDAL 586

Query: 540 GRIDLMMQSGSVP--NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
                + Q   V     ++++    + G    A K+    L  +   D+ SY   L  L 
Sbjct: 587 QLYSTLRQKKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLC 646

Query: 598 AAGKTLNAYSILFKIMEKG 616
           + G+  +A   L   + +G
Sbjct: 647 SCGRVTDAVGFLDDALVRG 665



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 212/484 (43%), Gaps = 54/484 (11%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G  PT  ++N +L  F  S +   A  FF+  ++  +S +V TYN ++    +  + ++ 
Sbjct: 108 GCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKG 167

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             L   M    + P  I+Y T+I G         AL +FDEM+   V+P+ V Y  ++ G
Sbjct: 168 RGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDG 227

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
               G  V+      EM ER +  ++  VF  ++                          
Sbjct: 228 FFKRGDFVKAG----EMWERLL--REELVFPSVVS------------------------- 256

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y ++I   CK   +   +++ +++ + E           +  +Y+ +I  L   G 
Sbjct: 257 ----YNVMISGLCKCGRFSEGLEIWERMKKNE--------RKCDLFTYSALIHGLSEAGD 304

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
            G A   + +++ +GV  D V  N ++ G  K GN +  FE+ + MG+  + R+  +Y  
Sbjct: 305 LGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSL-RNVRSYNI 363

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
            ++     G+  DA    D ++E      S+ +  V+  L  +G V  A +V++    + 
Sbjct: 364 FLKGLFENGKVDDAMMLWDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHRE 419

Query: 515 VKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
              ++D  A   ++ AL   G ++EA G ++LM + G   N    + L+    +  K  +
Sbjct: 420 GGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDS 479

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           AVK+     G+ C + + SY  +++ LL A +   AY  + +++EKG   D  +   LI 
Sbjct: 480 AVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIG 539

Query: 630 GLNQ 633
           GL +
Sbjct: 540 GLYE 543



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 142/278 (51%), Gaps = 7/278 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVE-RAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           H L +N   G  N   ALQ     E R G  + D   +  +I  L + G+L+ A  ++  
Sbjct: 397 HGLCWN---GYVN--RALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVEL 451

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K+G +++  +  VLI+ + K   +  +VK+F  M   G   +V SY+ L   +LR  R
Sbjct: 452 MNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAER 511

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A    N+ML +G +P   TY+ ++ G + S  ++ A+R +      G   D++ YN 
Sbjct: 512 FREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNI 571

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+      K+++A +L++ +++K     ++++ T+++G+  V   + A +I+  +   +
Sbjct: 572 VIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGNCEMASKIWAHILEDE 630

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           ++P+ ++Y   L GLC  G++ +    L + + R   P
Sbjct: 631 LQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLP 668



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 131/277 (47%), Gaps = 10/277 (3%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIM--KQLGVERSVKSYDALFKLILRRGRYMMAKR 147
           D   + V++      G V  ++++ +    ++ G++    +Y +L   + + GR   A  
Sbjct: 388 DSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADG 447

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
               M   G +   H  NV++ GF    KL++A++ F +M  +G SL VV+YN +ING  
Sbjct: 448 VVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLL 507

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           R ++  EA     EM EK  +P +I+Y+T+I G       D ALR++ +      KP+ +
Sbjct: 508 RAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDII 567

Query: 268 TYTALLPGLCDAGKM---VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
            Y  ++  LC +GK+   +++   LR+  ++ +    ++  M+      K G+   A+ +
Sbjct: 568 MYNIVIHRLCSSGKVEDALQLYSTLRQ--KKCVNLVTHNTIMEGFY---KVGNCEMASKI 622

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              ++   +  +   Y I ++  C       A+  LD
Sbjct: 623 WAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLD 659


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 213/425 (50%), Gaps = 18/425 (4%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  ++  Y KKG  + ++ + + M++ GVE  V +Y+ +   + +  R   A     +M 
Sbjct: 262 YNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMR 321

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            + + P   TYN ++ GFF   K+  AI  F +M  +G+   + TY T+I+GY R   +D
Sbjct: 322 GDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTID 381

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA ++  EM+   ++P+ ++Y+ M+ G V      +A  ++D M+ +   P+  TY  LL
Sbjct: 382 EALRVLYEMQVAGVKPSEVTYSAMLNGSV-----HEAFSVYDNMEKYGCSPDVYTYRNLL 436

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPK-DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
            GLC  G +V+ ++ +  +V  +IP   D      LL   C  G L+ A D+ + M+ ++
Sbjct: 437 RGLCKGGHLVQAKEFMSCIV--HIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTIN 494

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              +   Y IL+  FC+      A+ LL  ++EK ++  P      +  +Y  +++ L  
Sbjct: 495 FIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLV--P------DIVTYTCLLKGLIK 546

Query: 393 NGQTGKAEIFFRQLM-KKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            GQ   A   F++++ K+G+  D +A+N+++ G+ K G        +  M +  V  +  
Sbjct: 547 EGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPA 606

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           +Y  L+  +++KG  + +      M+  G  P +  +R ++  L + G ++ A + +  M
Sbjct: 607 SYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKM 666

Query: 511 VEKGV 515
           V +G+
Sbjct: 667 VLEGI 671



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 230/491 (46%), Gaps = 20/491 (4%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D     +++ S   +G ++ +  +   MK   +  +V +Y+ +    +++GR+  A    
Sbjct: 224 DVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLP-NVITYNTILHWYVKKGRFKAAMCVL 282

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
             M   G+E   +TYN+M+       +   A    + M+   ++ D  TYNT+I G+   
Sbjct: 283 EDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDE 342

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
            KM  A  +F EM  + ++P++ +YTT+I GY      D+ALR+  EM+   VKP+ VTY
Sbjct: 343 SKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTY 402

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           +A+L      G + E   V   M E+Y    D   +  LL   CK GHL  A + +  ++
Sbjct: 403 SAML-----NGSVHEAFSVYDNM-EKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIV 456

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
            +    +      L+   C     D A+ L +K+V    I  P      +  +Y  ++  
Sbjct: 457 HIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFI--P------DIHTYTILLSG 508

Query: 390 LCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA-FEIVKIMGRRGVPR 447
            C  G+   A I  + +++KG++ D V +  L++G  KEG   +A +   +I+ + G+  
Sbjct: 509 FCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYA 568

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D  AY  ++  YL+ G+    +  +  M ++   P  + +  +M    + G +  +  + 
Sbjct: 569 DCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLY 628

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           K MV KG+K        ++  L   G +E A+  +D M+  G  P+   FD L++  SEK
Sbjct: 629 KDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEK 688

Query: 565 GKTIAAVKLLD 575
            +   A++L +
Sbjct: 689 SRMSDALQLFN 699



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 142/585 (24%), Positives = 261/585 (44%), Gaps = 25/585 (4%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  MI+ L ++ +  HA  +L  M    +  DE  +  LI+ +  +  +  ++ IF
Sbjct: 293 DVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIF 352

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M + G++ S+ +Y  L     R G    A R   +M   G++P+  TY+ ML G    
Sbjct: 353 NEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG---- 408

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A   +++M+  G S DV TY  ++ G  +   + +A++  + +      P+ I  
Sbjct: 409 -SVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHI---PSAIDQ 464

Query: 235 TT---MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            T   ++ G       D+AL + ++M + +  P+  TYT LL G C  GK+V    +L+ 
Sbjct: 465 KTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQM 524

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M+E+ + P D   +  LL    K G + AA+ + + +I      + G Y   I       
Sbjct: 525 MLEKGLVP-DIVTYTCLLKGLIKEGQVKAASYLFQEII-----CKEGMYADCIAYNSMMN 578

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
            Y +A KL    VE  I    Q+ +    +SYN ++      G   ++   ++ +++KG+
Sbjct: 579 GYLKAGKL--HKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGI 636

Query: 412 LDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
               V +  LI G SK G  + A + +  M   G+  D  ++  LI ++  K   +DA  
Sbjct: 637 KPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQ 696

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
             + M     SP+S  + +++  L     +Q +  V++ MVE G++        ++ A  
Sbjct: 697 LFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKC 756

Query: 531 MRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G +  A    + M   G VP      S++  LS+ GK    + +    +    +  +A
Sbjct: 757 RFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIA 816

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGL 631
           ++  ++  L    K  +A   L  +ME  G+  D  + + LI GL
Sbjct: 817 TFTTLMHGLCKEAKISDALH-LKSLMESCGLKIDVVTYNVLITGL 860



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/466 (22%), Positives = 205/466 (43%), Gaps = 46/466 (9%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T+  ++    R GK+  A  +L  M +KG+  D   +  L++   K+G V+ + 
Sbjct: 495 FIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAAS 554

Query: 112 KIF-DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
            +F +I+ + G+     +Y+++    L+ G+    +     M    + P   +YN+++ G
Sbjct: 555 YLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHG 614

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
                 L  +I  ++DM  +GI    VTY  +I G ++   ++ A K   +M  + I P 
Sbjct: 615 HIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPD 674

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
            +S+  +I  +    R  DAL++F+ MK   + P++ TY+A++ GL     +     VLR
Sbjct: 675 RLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLR 734

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           +MVE  + PK ++ ++ L+  +C+ G +N A  + + M  L I                A
Sbjct: 735 DMVESGLEPK-HTHYIALINAKCRFGDINGAFRLKEEMTALGIV--------------PA 779

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
           E+ D +I                             ++ L   G+  +  I F  +++ G
Sbjct: 780 EVADSSI-----------------------------VRGLSKCGKVEEGIIVFCSIIRAG 810

Query: 411 VLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           ++  +A F  L+ G  KE     A  +  +M   G+  D   Y  LI    +    +DA 
Sbjct: 811 MVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDAL 870

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
              + M   G  P  + + ++ E+++  GR     +++  + ++G+
Sbjct: 871 ELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGL 916



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 129/580 (22%), Positives = 242/580 (41%), Gaps = 61/580 (10%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A+  F  + R GL      T+  +I+   R G ++ A  +L +M   GV+  E  +  ++
Sbjct: 348 AIHIFNEMLRQGL-KPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAML 406

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN-------- 150
                 G V E+  ++D M++ G    V +Y  L + + + G  + AK + +        
Sbjct: 407 N-----GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSA 461

Query: 151 ---------------------------KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
                                      KM++    P  HTY ++L GF    K+  A+  
Sbjct: 462 IDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVIL 521

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK-NIEPTVISYTTMIKGYV 242
            + M  +G+  D+VTY  ++ G  +  ++  A  LF E+  K  +    I+Y +M+ GY+
Sbjct: 522 LQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYL 581

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              +         +M    V PN  +Y  L+ G    G +     + ++MV + I P + 
Sbjct: 582 KAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNV 641

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           +  + +LG+  K G +  A   L  M+   I  +   + +LI  F +      A++L + 
Sbjct: 642 TYRLLILGLS-KHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNC 700

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
           +  K + + P S       +Y+ MI  L        +    R +++ G L+P    +  L
Sbjct: 701 M--KWLYMSPSS------KTYSAMINGLIRKNWLQHSCDVLRDMVESG-LEPKHTHYIAL 751

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRG-VPRD-ADAYICLIESYLRKGEPADAKTALDSMIED 478
           I    + G+ + AF + + M   G VP + AD+ I  +    + G+  +      S+I  
Sbjct: 752 INAKCRFGDINGAFRLKEEMTALGIVPAEVADSSI--VRGLSKCGKVEEGIIVFCSIIRA 809

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P  + F ++M  L ++ ++  A  +   M   G+K ++     ++  L     V +A
Sbjct: 810 GMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDA 869

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           L   + M   G  PN   + +L   +   G+T+   KLL+
Sbjct: 870 LELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLN 909



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 159/345 (46%), Gaps = 9/345 (2%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + GKL+     + DM +  V  +   + +L+  + KKG +  S+ ++  M + G++ +  
Sbjct: 582 KAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNV 641

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y  L   + + G   +A ++ +KM+ EGI P R +++V++  F    ++  A++ F  M
Sbjct: 642 TYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCM 701

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           K   +S    TY+ MING  R   +  +  +  +M E  +EP    Y  +I         
Sbjct: 702 KWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDI 761

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           + A R+ +EM +  + P  V  ++++ GL   GK+ E   V   ++   + P   + F  
Sbjct: 762 NGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTI-ATFTT 820

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   CK   ++ A  +   M    +  +   Y +LI   CK +    A++L +++  K 
Sbjct: 821 LMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKG 880

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
             LRP  T      +Y  + + +   G+T + E     +  +G++
Sbjct: 881 --LRPNVT------TYTTLTEAIYGTGRTLEGEKLLNDIEDRGLV 917



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 153/344 (44%), Gaps = 51/344 (14%)

Query: 27  YNVL-HGAKNSEH---ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           YN+L HG     H   ++  ++ + R G+      T+  +I  L + G +  A   L  M
Sbjct: 608 YNILMHGHIKKGHLSRSIYLYKDMVRKGI-KPTNVTYRLLILGLSKHGMIEIAVKFLDKM 666

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  D   F+VLI ++ +K  + +++++F+ MK L +  S K+Y A+   ++R+   
Sbjct: 667 VLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWL 726

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLW--------------------------------- 169
             +      M+  G+EP +HT+ + L                                  
Sbjct: 727 QHSCDVLRDMVESGLEP-KHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSS 785

Query: 170 ---GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
              G     K+E  I  F  +   G+   + T+ T+++G  +  K+ +A  L + M+   
Sbjct: 786 IVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCG 845

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           ++  V++Y  +I G   ++   DAL +++EMKS  ++PN  TYT L   +   G+ +E +
Sbjct: 846 LKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGE 905

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           K+L ++ +R + P            QC    +  A D L  MIR
Sbjct: 906 KLLNDIEDRGLVPSYTD--------QCPEWRMENAMDRLN-MIR 940



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 179/430 (41%), Gaps = 21/430 (4%)

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           L   +   +  P V  +  ++  YV  +R  DA      M +   K +A    A+L  L 
Sbjct: 144 LLCTISRCDSNPLV--FDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALV 201

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
           + G+   V   L+E + R  P  D +    +L   C  G+L  A  ++  M   S+P   
Sbjct: 202 EIGESKHVWFFLKEGLVRKFP-LDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLPNVI 260

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y  ++  + K   +  A+ +L+ +         ++ ++ +  +YN MI  LC   ++ 
Sbjct: 261 T-YNTILHWYVKKGRFKAAMCVLEDM--------EKNGVEADVYTYNIMIDKLCKMKRST 311

Query: 398 KAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
            A +  +++    +  D   +N LI+G   E     A  I   M R+G+      Y  LI
Sbjct: 312 HAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLI 371

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           + Y R G   +A   L  M   G  P+   + +++     +G V  A  V  +M + G  
Sbjct: 372 DGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAML-----NGSVHEAFSVYDNMEKYGCS 426

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV---PNFDSLLSVLSEKGKTIAAVKL 573
            ++     +L  L   GH+ +A   +  ++   S       ++LL  +   G    A+ L
Sbjct: 427 PDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDL 486

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
            +  +  + I D+ +Y  +L      GK + A  +L  ++EKG V D  +   L+ GL +
Sbjct: 487 CEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIK 546

Query: 634 EGNTKQADIL 643
           EG  K A  L
Sbjct: 547 EGQVKAASYL 556



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/271 (19%), Positives = 121/271 (44%), Gaps = 3/271 (1%)

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           ++ ++ N ++  +C  G    A+    ++    + + + +N ++  + K+G   +A  ++
Sbjct: 223 LDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLPNVITYNTILHWYVKKGRFKAAMCVL 282

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           + M + GV  D   Y  +I+   +      A   L  M  D  +P    + ++++  F++
Sbjct: 283 EDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDE 342

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
            ++  A  +   M+ +G+K +L     +++     G ++EAL  +  M  +G  P+  + 
Sbjct: 343 SKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTY 402

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
            ++L+  G    A  + D      C  D+ +Y  +L  L   G  + A   +  I+    
Sbjct: 403 SAMLN--GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPS 460

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
             D K+ + L+ G+   G+  +A D+  +M+
Sbjct: 461 AIDQKTLNALLLGICNHGSLDEALDLCEKMV 491


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 141/588 (23%), Positives = 274/588 (46%), Gaps = 53/588 (9%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F VLI+ Y + G +  +V++ + MK  G    + +Y+ L     + G    AK+   ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
              +EP   TY  ++  +  S  LE A+  +++M  + +  DVVTY  ++NG  +  K++
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 214 EAEKLFAEMKEKNIEPT-----------------------------------VISYTTMI 238
           EA+ +F EM+E  + P                                    V+ YT ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G      A++A  +F  +    + PN VTY+AL+ G C  G + + + +L+EM E++I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +  V+  ++    K G LN A DV++ M++ +I      YG LI+ + KA+    A+ 
Sbjct: 260 P-NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 359 LLDKLVEKEIILRPQSTLDMEASSY--NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           L  ++  +           +E +++  +  + +L  +G+  +A+  F+ +M +G+L D V
Sbjct: 319 LFKEMKSR----------GLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRV 368

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            + +++ G  K G    AF I + M  +    D  AY  LI    + G+  ++++    M
Sbjct: 369 NYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGM 427

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            + G +P S+ F +++ +  ++G +  A +++  M   G+K N      +++ L   G +
Sbjct: 428 RQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487

Query: 536 EEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL---DFCLGRDCIIDLASYEKV 592
           E+ +  ++ M+  G  P   +  +VL    K+  A  +L   D  +G    +DL++Y  +
Sbjct: 488 EKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTL 547

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +      G    A  +   +M KG + D  + + LI G     + K+A
Sbjct: 548 ISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 244/509 (47%), Gaps = 21/509 (4%)

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
           R+ N      I  +   +NV++ G+  + ++  A+   E MK+ G + D+VTYNT++NG+
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +   +  A+KL  E+   N+EP VI+YTT+I  Y   +  +DAL ++DEM    + P+ 
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VTYT ++ GLC +GK+ E + V REM E  + P   S +  L+    K G++  A  +  
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFS-YATLIDSLFKEGNVAEAFVLQG 181

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+   I  +   Y  L++   KA M + A  +   L+E+ ++  P         +Y+ +
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV--PNCV------TYSAL 233

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I   C  G   K E+  +++ +K +  + + +++++ G++K+G  + A ++++ M +R +
Sbjct: 234 IDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI 293

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             +   Y  LI+ Y +  +   A      M   G    + +  S + +L   GR++ A  
Sbjct: 294 LPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNFDSLLSVLS 562
           + K M+ +G+  +      +++     G   +A      M +  S   V  ++ L++ L 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 563 EKGKTIAAVKLLDFCLGRDCI---IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           + GK  +      F  G   +    D A++  +++A    G   NA  +L ++   G   
Sbjct: 414 KLGKYESE----SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 620 DWKSSDKLIAGLNQEGNT-KQADILSRMI 647
           +  + + L+  L   G   K  D+L+ M+
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDML 498



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 206/460 (44%), Gaps = 18/460 (3%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           + RSV+ ++ L     R G    A      M +EG  P   TYN ++ GF     L TA 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +   ++    +  +V+TY T+I+ Y + + +++A  ++ EM  K++ P V++YT ++ G 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               + ++A  +F EM+   V PN  +Y  L+  L   G + E   +   MV R I   D
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI-GFD 191

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             V+  L+    K+G  N A D+ + ++  S+      Y  LI+  CK    ++   LL 
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNL 420
           ++ EK I   P   +      Y+ ++      G   +A    R+++++ +L  V  +  L
Sbjct: 252 EMEEKHIF--PNVIV------YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G+ K      A ++ K M  RG+  +       + +  R G   +A      M+  G 
Sbjct: 304 IDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK--ILEALLMRGHVEEA 538
            P    + S+M+  F+ G+   A  + + M EK      D+VA   ++  L   G  E  
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK--SSGFDVVAYNVLINGLFKLGKYESE 421

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
                 M Q G  P+   F+++++   ++G    A+KLL+
Sbjct: 422 SFHTG-MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 130/587 (22%), Positives = 256/587 (43%), Gaps = 14/587 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+   +   L  A  +  +M  K +  D   +  ++    K G V+E+  +F  M
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +++GV  +  SY  L   + + G    A     +M+  GI      Y  ++ G F +   
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A   F+ +    +  + VTY+ +I+G+ +   +++ E L  EM+EK+I P VI Y+++
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + GY      ++A+ +  +M   ++ PN   Y  L+ G   A +      + +EM  R +
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
             ++N V    +    +SG +  A ++ K M+   +  +  +Y  +++ F KA     A 
Sbjct: 329 -EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            +  ++ EK       S  D+ A  YN +I  L   G+  ++E F   + + G+  D   
Sbjct: 388 NIAQEMTEK------SSGFDVVA--YNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSAT 438

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN +I  + KEGN  +A +++  M   G+  ++     L++     GE       L+ M+
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDML 498

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P  +  ++V+++  +  R      +   +V  GVK +L     ++      G + 
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558

Query: 537 EALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
            A      MM  G    +  +++L+           A  +    L      ++ +Y  +L
Sbjct: 559 RATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILL 618

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             L AA     A  ++ ++ E+G V +  + D L++G  + GN K+ 
Sbjct: 619 GGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKEC 665



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 121/565 (21%), Positives = 232/565 (41%), Gaps = 67/565 (11%)

Query: 14  IRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           +++LVP    +  + N L  +   E A   FR +E  G+   +R ++  +I+ L + G +
Sbjct: 115 VKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVV-PNRFSYATLIDSLFKEGNV 173

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
             A  +   M  +G+ +D  ++  L++   K G+   +  +F ++ +  +  +  +Y AL
Sbjct: 174 AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSAL 233

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
                + G     +    +M  + I P    Y+ ++ G+     L  A+     M  R I
Sbjct: 234 IDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI 293

Query: 193 SLDVVTYNTMINGY-----------------------------------NRFKKMDEAEK 217
             +V  Y T+I+GY                                    R  +M+EA++
Sbjct: 294 LPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           LF +M  + + P  ++YT+M+ G+    +  DA  I  EM       + V Y  L+ GL 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             GK  E +     M +  + P D++ F  ++   CK G+L  A  +L  M    +   +
Sbjct: 414 KLGK-YESESFHTGMRQLGLAP-DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNS 471

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLV----------------------EKEIILRPQST 375
               IL++  C A   ++ + LL+ ++                        ++IL     
Sbjct: 472 ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQ 531

Query: 376 L-----DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
           L      ++ S+YN +I   C  G   +A + F+ +M KG+L D + +N LI G+    +
Sbjct: 532 LVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSH 591

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
              AF +   M   GV  + + Y  L+          +A   ++ M E G  P ++ +  
Sbjct: 592 LKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDI 651

Query: 490 VMESLFEDGRVQTASRVMKSMVEKG 514
           ++    + G ++   ++   M+ KG
Sbjct: 652 LVSGHGKIGNMKECVKLYCEMITKG 676



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 1/282 (0%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G+  D   F  +I +Y K+G +  ++K+ + MK  G++ +  + + L + +   G 
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
                   N ML  G  PT  T+  +L     S + +  +   + +   G+ LD+ TYNT
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+ + R   +  A  +F +M  K I   +I+Y  +I GY        A  +  +M +  
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V PN  TY  LL GL  A  + E   ++ +M ER + P + + +  L+    K G++   
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVP-NATTYDILVSGHGKIGNMKEC 665

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
             +   MI      +   Y +LI  F K +   +A +L+ ++
Sbjct: 666 VKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 137/290 (47%), Gaps = 1/290 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   MI    + G L +A  +L +M   G++ +     +L++     G +++++ + 
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M  +G   +  ++ A+     +  R  +     ++++  G++    TYN ++  F   
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRL 554

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A   F+DM  +GI  D++TYN +I+GY     + +A  + ++M  + + P V +Y
Sbjct: 555 GMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETY 614

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G  A     +A  + ++MK   + PNA TY  L+ G    G M E  K+  EM+ 
Sbjct: 615 NILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMIT 674

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
           +   PK  + +  L+    K   ++ A ++++ M    IP  +  Y ILI
Sbjct: 675 KGFVPKTRT-YNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 132/287 (45%), Gaps = 1/287 (0%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + N      N  +AL+    ++  GL  +    ++ +++ L   G++     +L DM 
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI-LVQRLCAAGEIEKTMDLLNDML 498

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
             G        + ++++  K       + + D +  +GV+  + +Y+ L     R G   
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F  M+ +GI     TYN ++ G+ +S  L+ A      M + G+S +V TYN ++
Sbjct: 559 RATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILL 618

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            G +  + + EA  L  +MKE+ + P   +Y  ++ G+  +    + ++++ EM +    
Sbjct: 619 GGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFV 678

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           P   TY  L+       KM + +++++EM  R IPP  ++  + + G
Sbjct: 679 PKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 12/255 (4%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I    R+G +  A  +  DM  KG+  D   +  LI  Y     ++++  + 
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   GV  +V++Y+ L   +        A    N+M   G+ P   TY++++ G    
Sbjct: 600 SQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKI 659

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             ++  ++ + +M ++G      TYN +I+ + + KKM +A++L  EM+ + I P   +Y
Sbjct: 660 GNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTY 719

Query: 235 TTMIKGYVAVERADD------------ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
             +I G+  + +  +            A R+F+EM      P   T   +   L   GK 
Sbjct: 720 DILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKK 779

Query: 283 VEVQKVLREMVERYI 297
            + Q++L ++ ++ +
Sbjct: 780 ADAQRILNKLYKKKV 794


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 142/613 (23%), Positives = 269/613 (43%), Gaps = 78/613 (12%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK-------- 84
            + +  AL+ F  V R      + + +  +I +L        ARC++ D+ +        
Sbjct: 47  CRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRS 106

Query: 85  -------------KGVQWDEDMFEVLIESYGKKGIVQESVKI------------------ 113
                        +  ++  ++F VLI ++ + G+V+E++ +                  
Sbjct: 107 RICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLD 166

Query: 114 -------FDIMKQL-------GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
                  FD M ++       G   +V +Y  L     R+G ++ A R F++M+ + I P
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
           T   Y +++ G     ++  A   F  M++ G+  ++ TYNTM++GY +   + +A +L+
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
            EM    + P V+++  +I G    +    A +   +M SF V PN   Y  L+ G C A
Sbjct: 287 XEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
           G + E   +  E+ +  I P D   +  L+   C    +  A  +L+ M +      A  
Sbjct: 347 GNLSEALSLHSEIEKHEILP-DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI+ +CK    ++AI++  ++ EK I        +    +++ +I   C  G+   A
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGI--------EPNIITFSTLIDGYCKAGKMEAA 457

Query: 400 EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
              + +++ KG+L D VA+  LI GH K+GN   AF + K M   G+  +     CLI+ 
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517

Query: 459 YLRKGEPAD------AKTALDSMIEDGH-------SPASSLFRSVMESLFEDGRVQTASR 505
             + G  +D      AKT  D+     +       SP   ++ ++++ L  DGR+  AS+
Sbjct: 518 LCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASK 577

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKG 565
               M   G++ ++     I++      H+ + +     +++ G +PN  S+  VL++  
Sbjct: 578 FFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN-SSVYRVLAKGY 636

Query: 566 KTIAAVK-LLDFC 577
           +    +K  L FC
Sbjct: 637 EESGYLKSALSFC 649



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 192/454 (42%), Gaps = 49/454 (10%)

Query: 21  FDHNLVYNVL----HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           F   ++Y +L     G      A   FR +  +G+   +  T+  M++   ++  +  A 
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLP-NLYTYNTMMDGYCKIAHVKKAL 283

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            +  +M   G+  +   F +LI+   K   +  + K    M   GV  ++  Y+ L    
Sbjct: 284 ELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            + G    A    +++    I P   TY++++ G     ++E A    ++MK +G   + 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VTYNT+I+GY +   M++A ++ ++M EK IEP +I+++T+I GY    + + A+ ++ E
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    + P+ V YTAL+ G    G   E  ++ +EM E  + P   +VF     + C   
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP---NVFT----LSC--- 513

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
                                     LI+  CK      AIKL       +      + L
Sbjct: 514 --------------------------LIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNEL 547

Query: 377 DMEASS-----YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN--LIRGHSKEGN 429
           D    S     Y  +IQ LC +G+  KA  FF  +   G L P  F    +I+GH +  +
Sbjct: 548 DRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSG-LRPDVFTCIVIIQGHFRAMH 606

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
                 +   + + G+  ++  Y  L + Y   G
Sbjct: 607 LRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/427 (20%), Positives = 182/427 (42%), Gaps = 53/427 (12%)

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           + + ++     P V  +  +I  +  +   ++AL ++ +M   DV P       +L GL 
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             G+   + KV  +MV R                        A+ +V+            
Sbjct: 170 KKGRFDTMWKVYGDMVAR-----------------------GASPNVVT----------- 195

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             YG LI+  C+   + +A +L D+++EK+I   P   +      Y  +I+ LC   +  
Sbjct: 196 --YGTLIDGCCRQGDFLKAFRLFDEMIEKKIF--PTVVI------YTILIRGLCGESRIS 245

Query: 398 KAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +AE  FR +   G+L  +  +N ++ G+ K  +   A E+   M   G+  +   +  LI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILI 305

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           +   +  E   A+  L  M   G  P   ++  +++   + G +  A  +   + +  + 
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            ++   + +++ L     +EEA G +  M + G +PN   +++L+    ++G    A+++
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                 +    ++ ++  ++D    AGK   A  +  +++ KG + D  +   LI G  +
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 634 EGNTKQA 640
           +GNTK+A
Sbjct: 486 DGNTKEA 492



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 21/161 (13%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           ++ RG+  D+   N++IN Y++  ++  A +LF   ++K+    V ++T+MI G+    +
Sbjct: 775 IRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKD----VTTWTSMIVGHALHGQ 830

Query: 247 ADDALRIFDEMKSFD----------------VKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           A++AL++F EMK  +                V PN VT+  +L     AG + E ++  R
Sbjct: 831 AEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFR 890

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD-VLKAMIR 330
            M E Y      S F  ++ + C++G L  A + +LK  +R
Sbjct: 891 SMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVR 931



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 3/231 (1%)

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           A N ++ G  K+G  D+ +++   M  RG   +   Y  LI+   R+G+   A    D M
Sbjct: 160 ACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM 219

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           IE    P   ++  ++  L  + R+  A  + ++M   G+  NL     +++      HV
Sbjct: 220 IEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHV 279

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           ++AL     M+  G +PN   F  L+  L +  + ++A K L        + ++  Y  +
Sbjct: 280 KKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCL 339

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           +D    AG    A S+  +I +   + D  +   LI GL      ++AD L
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 210/440 (47%), Gaps = 16/440 (3%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           L++ +    K SE      + V+R      D  T+  ++  L + G ++ A  +L  M  
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGC--QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
             ++ +  +F  +I+S  K   V+ +V +F  M+  G+  +V +Y++L   +   GR+  
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A R  + ML + I P   T+N ++  FF   KL  A +  E+M  R I  D +TYN +IN
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G+    ++DEA+++F  M  K+  P + +Y T+I G+   +R +D + +F EM    +  
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N VTYT ++ G   AG     Q V ++MV   + P D   +  LL   C  G L+ A  +
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV-PTDIMTYSILLHGLCSYGKLDTALVI 490

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
            K + +  +      Y  +IE  CKA     A  L   L      ++P      +  +YN
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS-----IKP------DVVTYN 539

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            MI  LC      +A+  FR++ + G L +   +N LIR + ++ +  ++ E++K M   
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599

Query: 444 GVPRDADAYICLIESYLRKG 463
           G   DA   I L+ + L  G
Sbjct: 600 GFVGDAST-ISLVTNMLHDG 618



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 224/494 (45%), Gaps = 16/494 (3%)

Query: 64  EILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           ++L  V K+N    ++     M   G+  D   + + I  + ++  +  ++ +   M +L
Sbjct: 88  KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G E  + +  +L        R   A    ++M+  G +P   T+  ++ G FL  K   A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +   + M  RG   D+VTY T++NG  +   +D A  L  +M+   I+  V+ + T+I  
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                  + A+ +F EM++  ++PN VTY +L+  LC+ G+  +  ++L  M+E+ I P 
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP- 326

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   F  L+    K G L  A  + + MI+ SI  +   Y +LI  FC     D A ++ 
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
             +V K+ +   Q        +YN +I   C   +       FR++ ++G++ + V +  
Sbjct: 387 KFMVSKDCLPNIQ--------TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +I+G  + G+ DSA  + K M    VP D   Y  L+      G+   A      + +  
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
                 ++ +++E + + G+V  A  +  S+    +K ++     ++  L  +  ++EA 
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEAD 555

Query: 540 GRIDLMMQSGSVPN 553
                M + G++PN
Sbjct: 556 DLFRKMKEDGTLPN 569



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 205/467 (43%), Gaps = 13/467 (2%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           +HD  T+   I    R  +L+ A  +L  M K G + D      L+  Y     + ++V 
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + D M ++G +    ++  L   +    +   A    ++M+  G +P   TY  ++ G  
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               ++ A+     M++  I  +VV +NT+I+   +++ ++ A  LF EM+ K I P V+
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y ++I       R  DA R+   M    + PN VT+ AL+      GK+VE +K+  EM
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           ++R I P D   +  L+   C    L+ A  + K M+          Y  LI  FCK + 
Sbjct: 355 IQRSIDP-DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            +  ++L  ++ ++ ++            +Y  +IQ     G    A++ F+Q++   V 
Sbjct: 414 VEDGVELFREMSQRGLV--------GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D + ++ L+ G    G  D+A  I K + +  +  +   Y  +IE   + G+  +A   
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             S+      P    + +++  L     +Q A  + + M E G   N
Sbjct: 526 FCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPN 569



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 211/449 (46%), Gaps = 12/449 (2%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           +  D  T   +I  L    K + A  ++  M ++G Q D   +  ++    K+G +  ++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            + + M+   ++ +V  ++ +   + +     +A   F +M ++GI P   TYN ++   
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               +   A R   +M  + I+ +VVT+N +I+ + +  K+ EAEKL  EM +++I+P  
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I+Y  +I G+    R D+A ++F  M S D  PN  TY  L+ G C   ++ +  ++ RE
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M +R +   +   +  ++    ++G  ++A  V K M+   +PT+   Y IL+   C   
Sbjct: 424 MSQRGL-VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             D A+ +   L + E        +++    YN MI+ +C  G+ G+A   F  L  K  
Sbjct: 483 KLDTALVIFKYLQKSE--------MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP- 533

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D V +N +I G   +     A ++ + M   G   ++  Y  LI + LR  + A +   
Sbjct: 534 -DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRV 500
           +  M   G    +S   S++ ++  DGR+
Sbjct: 593 IKEMRSSGFVGDASTI-SLVTNMLHDGRL 620



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/546 (22%), Positives = 234/546 (42%), Gaps = 19/546 (3%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           V ++V +F  M +     S+  ++ L   + +  ++ +      +M + GI    +TY++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
            +  F    +L  A+     M   G   D+VT ++++NGY   K++ +A  L  +M E  
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P   ++TT+I G     +A +A+ + D+M     +P+ VTY  ++ GLC  G +    
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 287 KVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            +L +M    I  K N V F  ++   CK  H+  A D+   M    I      Y  LI 
Sbjct: 244 NLLNKMEAARI--KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             C    +  A +LL  ++EK+I        +    ++N +I      G+  +AE    +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKI--------NPNVVTFNALIDAFFKEGKLVEAEKLHEE 353

Query: 406 LMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           ++++ +  D + +N LI G       D A ++ K M  +    +   Y  LI  + +   
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             D       M + G    +  + ++++  F+ G   +A  V K MV   V  ++   + 
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           +L  L   G ++ AL     + +S    N   +++++  + + GK   A  L  FC    
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL--FC-SLS 530

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI-AGLNQEGNTKQA 640
              D+ +Y  ++  L +      A  +  K+ E G + +  + + LI A L        A
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590

Query: 641 DILSRM 646
           +++  M
Sbjct: 591 ELIKEM 596



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/516 (21%), Positives = 211/516 (40%), Gaps = 57/516 (11%)

Query: 175 LKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           +K++ A+  F DM KSR     +V +N +++   +  K +    L  +M+   I   + +
Sbjct: 62  IKVDDAVDLFGDMVKSRPFP-SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y+  I  +    +   AL +  +M     +P+ VT ++LL G C + ++ +   ++ +MV
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 294 ERYIPPKDNSVFMKLL----------------------GVQ-------------CKSGHL 318
           E    P D   F  L+                      G Q             CK G +
Sbjct: 181 EMGYKP-DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A ++L  M    I      +  +I++ CK    + A+ L  ++  K I  RP      
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI--RPN----- 292

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEI 436
              +YN +I  LC+ G+   A      +++K + +P  V FN LI    KEG    A ++
Sbjct: 293 -VVTYNSLINCLCNYGRWSDASRLLSNMLEKKI-NPNVVTFNALIDAFFKEGKLVEAEKL 350

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
            + M +R +  D   Y  LI  +       +AK     M+     P    + +++    +
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---- 552
             RV+    + + M ++G+  N      I++     G  + A   +   M S  VP    
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA-QMVFKQMVSNRVPTDIM 469

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            +  LL  L   GK   A+ +  +    +  +++  Y  +++ +  AGK   A+ +   +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
             K  V  + +   +I+GL  +   ++AD L R ++
Sbjct: 530 SIKPDVVTYNT---MISGLCSKRLLQEADDLFRKMK 562


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 146/593 (24%), Positives = 258/593 (43%), Gaps = 75/593 (12%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           +R +  D  K GVQ + + F +LI  Y      +E++++ + M + G      +Y+ +  
Sbjct: 195 SREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLT 254

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + +R +    +    +M + G+ P R+TYN+++ G+     L+ A    E M  +G+  
Sbjct: 255 ALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLP 314

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           DV TYNTM+ G     K+DEA +L  +M+   + P V++Y T+I G      +D A ++ 
Sbjct: 315 DVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLV 374

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           +EMK+  VK N VT+  ++   C  GK+ E   V+ +MVE    P D   +  ++   CK
Sbjct: 375 EEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSP-DCFTYNTMINGYCK 433

Query: 315 SGHLNAAADVLKAMIRLSIPTEA-----------------------------GH------ 339
           +G +  A  ++  M R  +  +                              G+      
Sbjct: 434 AGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVT 493

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           YG LI  + K E  DRA+KL +++ E  I+            +YN +I+ LC +G+T +A
Sbjct: 494 YGTLIMGYFKDEQADRALKLWEEMKETGIV--------ATIITYNTIIRGLCLSGKTDQA 545

Query: 400 EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                +L++KG++ D    N +I G+  EG  + AF+    M    +  D      L+  
Sbjct: 546 VDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRG 605

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             R+G      T  ++ I  G    +  +  ++ S  ++ R++ A  +M  M  K ++ +
Sbjct: 606 LCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPD 665

Query: 519 LDLVAKILEALLMRGHVEEA----------------------LGRIDLMMQSGSVPNFDS 556
                 I+  L   G  EEA                      LG  D+M        +  
Sbjct: 666 RYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMM--------YSE 717

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
            +S L  +GK   A+KL      +   ++  +Y K++D LL   K+    S+L
Sbjct: 718 QISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLL 770



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/583 (21%), Positives = 244/583 (41%), Gaps = 64/583 (10%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGR---YMMAKRYFNKMLSEGIEPTRHTYNVML 168
           +IF+ MK+L    ++ + + L   ++R       + ++  F   +  G++P  +T+N+++
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G+      E A+R    M   G   D VTYNT++    +  ++ +   L  +MK   + 
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P   +Y  ++ GY  ++   +A  + + M    + P+  TY  ++ GLCD GK+ E  + 
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVR- 337

Query: 289 LREMVERYIPPKDNSVF----------------------MKLLGVQ-------------C 313
           LR+ +E +    D   +                      MK  GV+             C
Sbjct: 338 LRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFC 397

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
             G ++ A++V+  M+      +   Y  +I  +CKA     A K++D++  K       
Sbjct: 398 TEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRK------- 450

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDS 432
             L ++  + N ++  +C   Q   A     +  K+G +LD V +  LI G+ K+   D 
Sbjct: 451 -GLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADR 509

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A ++ + M   G+      Y  +I      G+   A   L+ ++E G  P  S    ++ 
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIH 569

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--- 549
               +G V+ A +    MVE  +K ++     +L  L   G +E+ L   +  +  G   
Sbjct: 570 GYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPM 629

Query: 550 SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
               ++ ++S   ++ +   A  L+    G++   D  +Y  ++  L  AG+T  A  + 
Sbjct: 630 DTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLA 689

Query: 610 FKIMEKG------------GVTDWKSSDKLIAGLNQEGNTKQA 640
            K  EKG            G +D   S++ I+ L  +G  K A
Sbjct: 690 LKFAEKGQQVKTQDTSPELGTSDMMYSEQ-ISSLCTQGKYKDA 731



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 11/251 (4%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L   GK + A   L ++ +KG+  DE    ++I  Y  +G V+++ +  + M
Sbjct: 528 TYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM 587

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            +  ++  + + + L + + R G        FN  +S+G      TYN+++  F    +L
Sbjct: 588 VEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRL 647

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL---FAE----MKEKNIEPT 230
           E A     +M+ + +  D  TYN ++ G  +  + +EAEKL   FAE    +K ++  P 
Sbjct: 648 EDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPE 707

Query: 231 V----ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           +    + Y+  I       +  DA+++F + +   V  N  TY  L+ GL    K     
Sbjct: 708 LGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTT 767

Query: 287 KVLREMVERYI 297
            +L  MV   I
Sbjct: 768 SLLPFMVSATI 778


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 237/515 (46%), Gaps = 49/515 (9%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           AR +L D  K GV  + + F +LI  Y  +  V++++   + M + G      SY+ +  
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            +L+R     A+     M S+G+ P +HTYN+++ G+     L+ A +  E M    +  
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            V TYN ++NG+    K+DEA ++  EM++ N+ P V++Y T+I G      + +   + 
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           +EM    VK NAVTY  +L  +C  G M E    L +M E  + P D   +  L+G  CK
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSP-DCVTYNTLIGAYCK 435

Query: 315 SGHLNAAADVLKAMIR-----------------------------LSIPTEAGH------ 339
           +G +  A  ++  M                               L   ++ G+      
Sbjct: 436 AGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVS 495

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           YGILI  + K E  DRA+ L D++ E++I+    ST+     +YN +I  LC + +  +A
Sbjct: 496 YGILILGYFKDEKGDRALNLWDEMKERQIM---PSTI-----TYNSVIGGLCQSRKVDQA 547

Query: 400 EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC--LI 456
                ++++ G++ D   +N +I G   EGN + AF+    M         D Y C  L+
Sbjct: 548 IDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLF--KPDVYTCNILL 605

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
               R+G    A    ++++  G       + +++ SL ++G+ + A  ++  M  K + 
Sbjct: 606 RGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLG 665

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
            +      I+ AL   G ++EA      M++SG V
Sbjct: 666 PDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIV 700



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 131/568 (23%), Positives = 261/568 (45%), Gaps = 20/568 (3%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR-- 138
           D+P+      +++ +  I +Y +      + +IF+ MK+L    ++ + + L   ++R  
Sbjct: 134 DLPEPS----KELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYP 189

Query: 139 -RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
                ++A++     +  G+ P  +++N++++G+ L  K++ A+ +   M   G   D V
Sbjct: 190 SSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTV 249

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           +YNT+++   + + + EA  L  +MK K + P   +Y  ++ GY  +    +A ++ + M
Sbjct: 250 SYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIM 309

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
              ++ P   TY  L+ G C+ GK+ E  ++  EM +  + P D   +  L+    +   
Sbjct: 310 TRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLP-DVVTYNTLIDGCSQWRD 368

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
            +    +++ M +  +   A  Y I+++  CK      A   LDK+ E        + L 
Sbjct: 369 SSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEE--------NGLS 420

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
            +  +YN +I   C  G+ GKA     ++  KG+ +D    N ++     E   D A+ +
Sbjct: 421 PDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNL 480

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +    +RG   D  +Y  LI  Y +  +   A    D M E    P++  + SV+  L +
Sbjct: 481 LCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQ 540

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF-- 554
             +V  A   +  M+E G+  +      I+    + G+VE+A    + M+++   P+   
Sbjct: 541 SRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYT 600

Query: 555 -DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
            + LL  L  +G    A+KL +  + +   ID+ +Y  ++ +L   GK  NAY +L ++ 
Sbjct: 601 CNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEME 660

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
            K    D  +   +IA L   G  K+A+
Sbjct: 661 AKKLGPDQYTYKVIIAALTDAGRIKEAE 688



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 205/464 (44%), Gaps = 22/464 (4%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK++ A  I  +M K  V  D   +  LI+   +     E   + + M + GV+ +  +Y
Sbjct: 332 GKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTY 391

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + + K + ++G    A    +KM   G+ P   TYN ++  +  + K+  A R  ++M S
Sbjct: 392 NIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTS 451

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +G+ +D  T NT+++     KK+DEA  L     ++      +SY  +I GY   E+ D 
Sbjct: 452 KGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDR 511

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           AL ++DEMK   + P+ +TY +++ GLC + K+ +    L EM+E  + P D + +  ++
Sbjct: 512 ALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVP-DETTYNIII 570

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G++  A      MI      +     IL+   C+  M ++A+KL + LV K   
Sbjct: 571 HGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSK--- 627

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL-MKKGVLDPVAFNNLIRGHSKEG 428
                  D++  +YN +I  LC  G+   A     ++  KK   D   +  +I   +  G
Sbjct: 628 -----GKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAG 682

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
               A E    M   G+  D +         L+ G+    +  L S + +     S  + 
Sbjct: 683 RIKEAEEFTLKMVESGIVHDQN---------LKLGK---GQNVLTSEVSEHFDFKSIAYS 730

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             +  L    + + A  +   + ++GV  N      ++E L+ R
Sbjct: 731 DQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKR 774



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 23/242 (9%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L +  K++ A   L +M + G+  DE  + ++I  +  +G V+++ +  + M
Sbjct: 530 TYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEM 589

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            +   +  V + + L + + R G    A + FN ++S+G +    TYN ++       K 
Sbjct: 590 IENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKF 649

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI---------- 227
           E A     +M+++ +  D  TY  +I       ++ EAE+   +M E  I          
Sbjct: 650 ENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGK 709

Query: 228 -------------EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
                        +   I+Y+  I       +  DA+ +F E+    V  N  TY  L+ 
Sbjct: 710 GQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLME 769

Query: 275 GL 276
           GL
Sbjct: 770 GL 771


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 128/530 (24%), Positives = 258/530 (48%), Gaps = 35/530 (6%)

Query: 3   ERAWTTRLQNKIRALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           +RA     + K++ + P +F  + +      A+  + AL+ ++ +  +     D  +   
Sbjct: 98  DRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSC-RLDAVSSSA 156

Query: 62  MIEILGRVGKLNHARCILLDMP-KKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMK 118
           +I  L R  ++  A  +  +M  ++   W  D+  +  LI+ + K G +++++K+  +M+
Sbjct: 157 LITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 216

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
                 +V +Y +L   + + G    A   F +M S+G  P   TY  ++ G   + K++
Sbjct: 217 GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD 276

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A    ++M +     D V+YN +++GY R  +++EA++LF EM  K+  P  I+YT ++
Sbjct: 277 AARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLV 336

Query: 239 KGYVAVERADDALRIFDEMKS-FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +G+    R ++A  + + MK+   + P+ VTY+ ++ G   A + VE  + ++EM+ R +
Sbjct: 337 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 396

Query: 298 PPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
            P  N+V +  L+   CK+G +N A +VLK + +  + T    Y I+IE  C  +  + A
Sbjct: 397 AP--NAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVT----YTIVIEGLCGTDRTEEA 450

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
           + LL+++V K +        +    ++N +I  LC  G   +A      +   G L+P  
Sbjct: 451 LTLLEEMVNKRV--------EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG-LEPGM 501

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRG---------VPRDADAYICLIESYLRKGEP 465
           V +  L+ G S+ G  + A+E+ ++M R+          VP    A+  LI    +  E 
Sbjct: 502 VTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE--QAFSALIRGLCKAREI 559

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
             A   ++ +      PA     ++++ L   GR + A +++ S+ + G+
Sbjct: 560 DKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 139/577 (24%), Positives = 261/577 (45%), Gaps = 29/577 (5%)

Query: 15  RALVPQF-DHNLVYNVLHGAKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKL 72
           +++ P    ++ V N        + A +  R  V R G+   D  T+  +++ L R GK+
Sbjct: 39  KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGM-APDVVTYTSVVDGLCRDGKM 97

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  ++ +M  KGV+ D+  F  LI  +     V E++K++  +          S  AL
Sbjct: 98  DRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSAL 157

Query: 133 FKLILRRGRYMMAKRYFNKM-LSE--GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
              + R  R   A   F +M + E    +P   TY  ++ GF  S  LE A++    M+ 
Sbjct: 158 ITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG 217

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           R    +VVTY+++++G  +   +D+A  LF  M  K   P V++YTT+I G  A  + D 
Sbjct: 218 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 277

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A  + DEM +     + V+Y ALL G C  G++ E +++ +EM  +   P D   +  L+
Sbjct: 278 ARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLP-DRITYTCLV 336

Query: 310 GVQCKSGHLNAAADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
              C +  L  A  +L+ M     I  +   Y I++  + +A+ +  A + + +++ + +
Sbjct: 337 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 396

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEG 428
              P       A +Y+ +I  LC  G+   A    + + K    D V +  +I G     
Sbjct: 397 A--PN------AVTYSSLIDGLCKAGRVNHAMEVLKNVDKP---DVVTYTIVIEGLCGTD 445

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             + A  +++ M  + V      +  +I +  R G+  +A   L +M   G  P    + 
Sbjct: 446 RTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 505

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKEN--LDLVAKILEALLMRG-----HVEEALGR 541
           +++E     GR++ A  + + M  K  K +   +LV +   + L+RG      +++A+  
Sbjct: 506 TLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAV 565

Query: 542 IDLMMQSGSVPNFDSLLSV---LSEKGKTIAAVKLLD 575
           ++ +      P  +  L++   L   G+T  A KL++
Sbjct: 566 VEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLIN 602



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 219/503 (43%), Gaps = 58/503 (11%)

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEA 215
           + P   TY+ ++ GF    +++ A     +M +R G++ DVVTY ++++G  R  KMD A
Sbjct: 41  VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRA 100

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV------------- 262
            ++  EMK K +EP   +++ +I G+    + D+AL+++ E+ +                
Sbjct: 101 CEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITG 160

Query: 263 -------------------------KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
                                    KP+ VTYTAL+ G C +G + +  K+L  M  R  
Sbjct: 161 LCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKC 220

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +   +  LL   CK+G L+ A D+ + M           Y  LI   C A   D A 
Sbjct: 221 VP-NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR 279

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            L+D++        P  T+     SYN ++   C  G+  +A+  F+++  K  L D + 
Sbjct: 280 LLMDEMTA---TCCPADTV-----SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRIT 331

Query: 417 FNNLIRGHSKEGNPDSA-FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           +  L+RG       + A F +  +    G+  D   Y  ++  Y R     +A   +  M
Sbjct: 332 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 391

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           I    +P +  + S+++ L + GRV  A  V+K++     K ++     ++E L      
Sbjct: 392 IARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIEGLCGTDRT 447

Query: 536 EEALGRIDLMMQ---SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           EEAL  ++ M+      SV  F+S++  L   G    A KLL           + +Y  +
Sbjct: 448 EEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 507

Query: 593 LDALLAAGKTLNAYSILFKIMEK 615
           L+     G+   AY  LF++M +
Sbjct: 508 LEGFSRTGRMEIAYE-LFEVMRR 529



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 217/473 (45%), Gaps = 30/473 (6%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKE-KNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           TYN ++NG  + +   +A ++  EM++ K++ P +++Y+T+I G+      D A  I  E
Sbjct: 11  TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70

Query: 257 MKSFD-VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           M + D + P+ VTYT+++ GLC  GKM    +++REM  + + P D   F  L+   C +
Sbjct: 71  MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEP-DKFTFSALITGWCNA 129

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
             ++ A  + K ++  S   +A     LI   C+      A +L      +E+ +R    
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELF-----QEMEMREDGA 184

Query: 376 LDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAF 434
              +  +Y  +I   C +G   KA ++      +K V + V +++L+ G  K G+ D A 
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           ++ + M  +G   +   Y  LI       +   A+  +D M        +  + ++++  
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG-----HVEEALGRIDLMMQSG 549
              GR++ A ++ K M  K       L  +I    L+RG      +EEA   ++ M  + 
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSC-----LPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359

Query: 550 S----VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
                V  +  +++  S   + + A + +   + R+   +  +Y  ++D L  AG+  +A
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA 419

Query: 606 YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI--RGEMSRGS 655
             +L K ++K  V  +     +I GL     T++A  +L  M+  R E S G+
Sbjct: 420 MEVL-KNVDKPDVVTYTI---VIEGLCGTDRTEEALTLLEEMVNKRVEPSVGT 468



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 51/338 (15%)

Query: 257 MKSFDVKPNAVTYTALLPGLCDA------------------------------------G 280
           M+ F V PN  TY  ++ GLC A                                    G
Sbjct: 1   MREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 59

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           +M    ++LREMV R     D   +  ++   C+ G ++ A ++++ M    +  +   +
Sbjct: 60  EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             LI  +C A   D A+KL      KEI+    S+  ++A S + +I  LC   + G+A 
Sbjct: 120 SALITGWCNARKVDEALKLY-----KEIL---TSSCRLDAVSSSALITGLCRERRIGEAY 171

Query: 401 IFFR--QLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIM-GRRGVPRDADAYICL 455
             F+  ++ + G   P  V +  LI G  K GN + A +++ +M GR+ VP +   Y  L
Sbjct: 172 ELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP-NVVTYSSL 230

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           +    + G+   A      M   G  P    + +++  L    +V  A  +M  M     
Sbjct: 231 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 290

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             +      +L+     G +EEA      M     +P+
Sbjct: 291 PADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPD 328


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 156/644 (24%), Positives = 295/644 (45%), Gaps = 27/644 (4%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAKNSE---HALQFFRWVERAGLFNHDRETHLKMIEI 65
           R + + RA  P  +     +V+H  ++++    AL+ FR   R     H   +   M+E+
Sbjct: 40  RARVQPRAPPPCDERRAAEDVIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLEL 99

Query: 66  L---GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           +   GRVG +     +   M ++ V+ +   F  +    G +G ++ +     +MK+ G+
Sbjct: 100 MRGHGRVGDMAE---VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGI 156

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             +  +Y+ L   +++ G    A   +  M+ +G+ P+  TY+V++  F     +ET + 
Sbjct: 157 VLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 216

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
              +M++ G+  +V +Y   I    + K+ DEA ++ A+M+ +  +P VI++T +I+   
Sbjct: 217 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC 276

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKD 301
              R  DA  +F +MK  D KP+ VTY  LL    D G    V ++   M  + Y    D
Sbjct: 277 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGY---ND 333

Query: 302 NSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           N V +  ++   C+ G +  A ++   M +  I  E   Y  LI  F KA+ +  A++L 
Sbjct: 334 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 393

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
             +     I  P+        ++   I +   +G++ KA   +  +  KG++ D VA N 
Sbjct: 394 KHM----DIHGPKPN----GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 445

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           ++ G +K G    A  +   +   GV  D   Y  +I+   +  +  +A      MIE+ 
Sbjct: 446 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 505

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P      S++++L++ GR   A R+   + E  ++        +L  L   G V+E +
Sbjct: 506 CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 565

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             ++ M  S   PN   ++++L  L + G    A+ +L     + CI DL+SY  V+  L
Sbjct: 566 HLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 625

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +   +   A+SI F  M+K  + D+ +   ++    + G  K+A
Sbjct: 626 VKEERYNEAFSI-FCQMKKVLIPDYATLCTILPSFVKIGLMKEA 668



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 146/611 (23%), Positives = 289/611 (47%), Gaps = 18/611 (2%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           +S+  ++ +  ++  G +N +   +  +I+ L +VG++  A  +  +M +KG+  ++  +
Sbjct: 315 DSQSVMEIWNAMKADG-YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSY 373

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             LI  + K     +++++F  M   G + +  ++        + G  + A + +  M S
Sbjct: 374 NSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKS 433

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
           +GI P     N +L+G   S +L  A R F ++K+ G+S D +TY  MI   ++  K DE
Sbjct: 434 KGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 493

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A K+F +M E N  P V++  ++I       R D+A RIF ++K  +++P   TY  LL 
Sbjct: 494 AVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLA 553

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GL   GK+ EV  +L EM     PP +   +  +L   CK+G +N A D+L +M      
Sbjct: 554 GLGREGKVKEVMHLLEEMYHSNYPP-NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 612

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP--MIQHLCH 392
            +   Y  +I    K E Y+ A  +  ++  K++++   +TL     S+    +++   H
Sbjct: 613 PDLSSYNTVIYGLVKEERYNEAFSIFCQM--KKVLIPDYATLCTILPSFVKIGLMKEALH 670

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
                  + +F Q   K   D  + ++L+ G  K+   + + E  +I+   G+  D D +
Sbjct: 671 -----IIKDYFLQPGSK--TDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLD-DFF 722

Query: 453 IC-LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +C LI+   ++ +  +A   +      G S  + L+ S++  L ++  +  A  +   M 
Sbjct: 723 LCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMK 782

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTI 568
           E G   +      +L+A+     +EE L   + M + G   +   +++++S L +  +  
Sbjct: 783 ELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLE 842

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A+ L    + +       +Y  +LD LL AG+  +A ++  +++E G   +    + L+
Sbjct: 843 QAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILL 902

Query: 629 AGLNQEGNTKQ 639
            G    GNT++
Sbjct: 903 NGHRIAGNTEK 913



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 143/632 (22%), Positives = 277/632 (43%), Gaps = 30/632 (4%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + + +   VL  AK  + A +    +E  G    D  TH  +I++L   G+++ A+ +  
Sbjct: 231 YSYTICIRVLGQAKRFDEAYRILAKMENEGC-KPDVITHTVLIQVLCDAGRISDAKDVFW 289

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M K   + D   +  L++ +G  G  Q  ++I++ MK  G   +V +Y A+   + + G
Sbjct: 290 KMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVG 349

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A   F++M  +GI P +++YN ++ GF  + +   A+  F+ M   G   +  T+ 
Sbjct: 350 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 409

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
             IN Y +  +  +A + +  MK K I P V++   ++ G     R   A R+F E+K+ 
Sbjct: 410 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 469

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+ +TYT ++     A K  E  K+  +M+E    P D      L+    K+G  + 
Sbjct: 470 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP-DVLAVNSLIDTLYKAGRGDE 528

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +   +  +++    G Y  L+    +       + LL+++          S      
Sbjct: 529 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY--------HSNYPPNL 580

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +YN ++  LC NG    A      +  KG + D  ++N +I G  KE   + AF I   
Sbjct: 581 ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 640

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTAL-DSMIEDGHSPASSLFRSVMESLFEDG 498
           M +  +P D      ++ S+++ G   +A   + D  ++ G     S   S+ME + +  
Sbjct: 641 MKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKA 699

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA------LGRIDLMMQSGSVP 552
            ++ +    + +   G+  +   +  +++ L  +    EA           + +++G   
Sbjct: 700 GIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL-- 757

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            ++SL+  L ++     A  L        C  D  +Y  +LDA+   GK++    +L K+
Sbjct: 758 -YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIEEML-KV 812

Query: 613 ME----KGGVTDWKSSDKLIAGLNQEGNTKQA 640
            E    KG  + + + + +I+GL +    +QA
Sbjct: 813 QEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 844



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 180/371 (48%), Gaps = 10/371 (2%)

Query: 86   GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
            G+  D+     LI+   K+    E+ ++    K  GV      Y++L   ++      +A
Sbjct: 715  GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 774

Query: 146  KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            +  F +M   G  P   TYN++L     S+++E  ++  E+M  +G     VTYNT+I+G
Sbjct: 775  EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISG 834

Query: 206  YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
              + +++++A  L+  +  +   PT  +Y  ++ G +   R +DA  +F+EM  +  K N
Sbjct: 835  LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 894

Query: 266  AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
               Y  LL G   AG   +V  + ++MV++ I P D   +  ++   CK+G LN      
Sbjct: 895  CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP-DIKSYTIIIDTLCKAGQLNDGLTYF 953

Query: 326  KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
            + ++ + +  +   Y +LI+   K++  + A+ L +++ +K I+  P         +YN 
Sbjct: 954  RQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV--PN------LYTYNS 1005

Query: 386  MIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
            +I HL   G+  +A   + +L+ KG    V  +N LIRG+S  G+ DSA+     M   G
Sbjct: 1006 LILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1065

Query: 445  VPRDADAYICL 455
               ++  Y+ L
Sbjct: 1066 CLPNSSTYMQL 1076



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 142/669 (21%), Positives = 274/669 (40%), Gaps = 50/669 (7%)

Query: 21   FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
            + H L  N    +  S  A+Q +  ++  G+   D      ++  L + G+L  A+ +  
Sbjct: 406  YTHVLFINYYGKSGESIKAIQRYELMKSKGIV-PDVVAGNAVLFGLAKSGRLGMAKRVFH 464

Query: 81   DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            ++   GV  D   + ++I+   K     E+VKIF  M +      V + ++L   + + G
Sbjct: 465  ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 524

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
            R   A R F ++    +EPT  TYN +L G     K++  +   E+M       +++TYN
Sbjct: 525  RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 584

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            T+++   +   +++A  +   M  K   P + SY T+I G V  ER ++A  IF +MK  
Sbjct: 585  TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 644

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             + P+  T   +LP     G M E   ++++   +     D S    L+    K   +  
Sbjct: 645  LI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK 703

Query: 321  AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
            + +  + +    I  +      LI++ CK +    A +L+ K     + L+         
Sbjct: 704  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK--------T 755

Query: 381  SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG----------VLDP---------------- 414
              YN +I  L        AE  F ++ + G          +LD                 
Sbjct: 756  GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 815

Query: 415  ----------VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
                      V +N +I G  K    + A ++   +  +G       Y  L++  L+ G 
Sbjct: 816  MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 875

Query: 465  PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              DA+   + M+E G     +++  ++      G  +    + + MV++G+  ++     
Sbjct: 876  IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 935

Query: 525  ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
            I++ L   G + + L     +++ G  P+   ++ L+  L +  +   AV L +    + 
Sbjct: 936  IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 995

Query: 582  CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA- 640
             + +L +Y  ++  L  AGK   A  +  +++ KG   +  + + LI G +  G+T  A 
Sbjct: 996  IVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAY 1055

Query: 641  DILSRMIRG 649
                RMI G
Sbjct: 1056 AAYGRMIVG 1064



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 120/546 (21%), Positives = 222/546 (40%), Gaps = 54/546 (9%)

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            T+  +++ L + G +N A  +L  M  KG   D   +  +I    K+    E+  IF  M
Sbjct: 582  TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 641

Query: 118  KQLGVERSVKSYDAL---FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            K++ +         L    K+ L +    + K YF   L  G +  R + + ++ G    
Sbjct: 642  KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYF---LQPGSKTDRSSCHSLMEGILKK 698

Query: 175  LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              +E +I F E + S GI+LD      +I    + KK  EA +L  + K   +      Y
Sbjct: 699  AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 758

Query: 235  TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++I G V     D A  +F EMK     P+  TY  LL  +   GK + ++++L+    
Sbjct: 759  NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIEEMLK---- 811

Query: 295  RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
                                         V + M R    +    Y  +I    K+   +
Sbjct: 812  -----------------------------VQEEMHRKGYESTYVTYNTIISGLVKSRRLE 842

Query: 355  RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            +AI L   L+ +     P         +Y P++  L   G+   AE  F ++++ G   +
Sbjct: 843  QAIDLYYNLMSQGFSPTP--------CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 894

Query: 414  PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
               +N L+ GH   GN +    + + M  +G+  D  +Y  +I++  + G+  D  T   
Sbjct: 895  CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFR 954

Query: 474  SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
             ++E G  P    +  +++ L +  R++ A  +   M +KG+  NL     ++  L   G
Sbjct: 955  QLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAG 1014

Query: 534  HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
               EA    + ++  G  PN   +++L+   S  G T +A       +   C+ + ++Y 
Sbjct: 1015 KAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYM 1074

Query: 591  KVLDAL 596
            ++ + L
Sbjct: 1075 QLPNQL 1080



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 123/250 (49%), Gaps = 1/250 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N + + L  ++  E A+  +  +   G F+    T+  +++ L + G++  A  +  +M
Sbjct: 828  YNTIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 886

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + G + +  ++ +L+  +   G  ++   +F  M   G+   +KSY  +   + + G+ 
Sbjct: 887  LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 946

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 YF ++L  G+EP   TYN+++ G   S +LE A+  F +M+ +GI  ++ TYN++
Sbjct: 947  NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSL 1006

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I    +  K  EA K++ E+  K  +P V +Y  +I+GY      D A   +  M     
Sbjct: 1007 ILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGC 1066

Query: 263  KPNAVTYTAL 272
             PN+ TY  L
Sbjct: 1067 LPNSSTYMQL 1076



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 96/182 (52%), Gaps = 1/182 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N++ N    A N+E     F+ +   G+ N D +++  +I+ L + G+LN        +
Sbjct: 898  YNILLNGHRIAGNTEKVCHLFQDMVDQGI-NPDIKSYTIIIDTLCKAGQLNDGLTYFRQL 956

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + G++ D   + +LI+  GK   ++E+V +F+ M++ G+  ++ +Y++L   + + G+ 
Sbjct: 957  LEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKA 1016

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A + + ++L++G +P   TYN ++ G+ +S   ++A   +  M   G   +  TY  +
Sbjct: 1017 AEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076

Query: 203  IN 204
             N
Sbjct: 1077 PN 1078


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 154/597 (25%), Positives = 274/597 (45%), Gaps = 26/597 (4%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R G  +H   +L +M   G   +   +  +I S   +G   E+ K+ + M+++G+   + 
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIV 259

Query: 128 SYDALFKLILRRGRYMMAKRYFNKM-LSEGI---EPTRHTYNVMLWGFFLSLKLETAIRF 183
           +++     + + G+ + A R F  M + E +   +P   TYN+ML GF      E A   
Sbjct: 260 TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI 319

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F+ MK+   +L + +YN  + G  R  K+ EA  +  EM EKNI+P + SY  ++ G   
Sbjct: 320 FDSMKNSE-TLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCK 378

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
                DA  I   M+   V P+ VTY+ LL G C  GK++E   VLREM++    P   +
Sbjct: 379 YGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYT 438

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
             + LL    K G  + A D+L+ M       +      +I   CKA   D+AI+++  +
Sbjct: 439 CNI-LLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497

Query: 364 VEK---EIILRPQSTLDM------------EASSYNPMIQHLCHNGQTGKAEIFFRQLM- 407
             +    +     S +D+            ++ +Y  +I  LC  G+  +A+    +++ 
Sbjct: 498 WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557

Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KK   D + F+  I  + K+G   SAF ++K M ++G  +    Y  LI+    + +  +
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFE 617

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
               +D M E G  P    + +++  L E G+++ A+ ++  M++KG+  N+     ++ 
Sbjct: 618 IYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIG 677

Query: 528 ALLMR---GHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           A       G  +E L  I L +       +  + + L   G+T+ A +L +  L R   +
Sbjct: 678 AFFKACDFGAAQE-LFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLAL 736

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
               Y  +++ L   GK  +A  IL K+M+K    D  S   +I  L + G+   AD
Sbjct: 737 KNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAAD 793



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 137/603 (22%), Positives = 236/603 (39%), Gaps = 110/603 (18%)

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           +  Y+ LF+  L+  R       +  M    ++P  +T+N+++        LE A   F+
Sbjct: 118 ISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFD 177

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M  +G   +  +   ++ GY R         L  EM+     P  ++Y T+I       
Sbjct: 178 KMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEG 237

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV--ERYIPPKDNS 303
           +  +A ++ ++M+   + P+ VT+   +  LC +G+++E  ++ R+M   E    PK N+
Sbjct: 238 QTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNT 297

Query: 304 VFMKL------------------------------------LGVQCKSGHLNAAADVLKA 327
           V   L                                    LG+  +SG L  A  +L  
Sbjct: 298 VTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGL-VRSGKLLEAHLILNE 356

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL-------------------------DK 362
           M   +I      Y IL+   CK  M+  A  +L                          K
Sbjct: 357 MAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGK 416

Query: 363 LVEKEIILRPQSTLDMEASSY--NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
           ++E   +LR    +    + Y  N ++  L   G+  +AE   + + ++G  LD V  N 
Sbjct: 417 ILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNT 476

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPR-----------------------DADAYICLI 456
           +I G  K GN D A EIV  M  RG                          D+  Y  +I
Sbjct: 477 MINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATII 536

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
               + G   +AK  L  MI    SP S +F + + +  + G++ +A RV+K M +KG  
Sbjct: 537 GGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCN 596

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
           ++L     +++ L     + E  G +D M + G  PN   +++++S LSE GK   A  L
Sbjct: 597 KSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCL 656

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAA-----------------GKTLNAYSILFKIMEKG 616
           LD  L +    ++ ++  ++ A   A                 G   + YS +F  +  G
Sbjct: 657 LDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAG 716

Query: 617 GVT 619
           G T
Sbjct: 717 GET 719



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 222/498 (44%), Gaps = 37/498 (7%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L R GKL  A  IL +M +K ++ +   + +L+    K G+  ++  I  +M++ GV   
Sbjct: 341 LVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPD 400

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y  L     RRG+ + A     +M+  G  P  +T N++L   +   +   A    +
Sbjct: 401 TVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQ 460

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M  RG  LD VT NTMING  +   +D+A ++ + M                +G  ++ 
Sbjct: 461 MMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM--------------WTRGSASLG 506

Query: 246 RADDALRIFDEMKSFDVK-------PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
              ++      +  FD++       P+++TY  ++ GLC  G++ E +K L EM+ + + 
Sbjct: 507 NLGNSF-----IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLS 561

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D+ +F   +   CK G L++A  VLK M +         Y  LI+             
Sbjct: 562 P-DSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYG 620

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AF 417
           L+D++ E+ I   P         +YN +I  L   G+   A     ++++KG+   +  F
Sbjct: 621 LMDEMKERGIF--PN------VYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTF 672

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
             LI    K  +  +A E+ +I       +++  Y  +    L  GE   AK   ++ ++
Sbjct: 673 RILIGAFFKACDFGAAQELFEIALSLCGHKES-LYSFMFNELLAGGETLKAKELFEAALD 731

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
              +  + L+R ++E L +DG++  AS ++  M++K    +      +++ L  RG    
Sbjct: 732 RSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHA 791

Query: 538 ALGRIDLMMQSGSVPNFD 555
           A    + MM+  S  +F+
Sbjct: 792 ADEFAERMMEMASETDFN 809



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 133/282 (47%), Gaps = 2/282 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L +VG+++ A+  LL+M  K +  D  +F+  I +Y K+G +  + ++ 
Sbjct: 528 DSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVL 587

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M++ G  +S+++Y++L + +    +        ++M   GI P  +TYN ++      
Sbjct: 588 KEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEG 647

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL+ A    ++M  +GIS ++ T+  +I  + +      A++LF E+           Y
Sbjct: 648 GKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLY 706

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + M    +A      A  +F+      +      Y  L+  LC  GK+ +   +L +M++
Sbjct: 707 SFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMD 766

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           +     D + FM ++    K G  +AA +  + M+ ++  T+
Sbjct: 767 KQY-SFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 225/493 (45%), Gaps = 20/493 (4%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT +TYN+++  +    + E A+  F  +   G+  DV +YNT+I+G+++  ++D+A +L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F +M E+++ P V++Y ++I G    +    + R+ ++M    ++PN  TY +L+ G   
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 279 AGKMVEVQKVLREMVERYIPP---KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           AG   E  +V +EM    + P     NS    L    C+   +  A D+  +M+      
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHAL----CRHNRIKEAKDIFDSMVLKGPKP 295

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  L+  +     +     L++ +V K I+  P          +N +I      G 
Sbjct: 296 NIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIV--PNHRF------FNILINAYARCGM 347

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             KA + F  +  KG++ D V F  +I    + G  D A      M   GVP     Y C
Sbjct: 348 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRC 407

Query: 455 LIESYLRKGEPADAKTALDSMI-EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           LI+     GE   AK  +  M+ +D   P    F S++ +LF++GRV     +M  MV+ 
Sbjct: 408 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQT 467

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G + N+     ++E   + G++EEA   +D M   G  PN   + +L+    + G+   A
Sbjct: 468 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 527

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           + +    L +        Y  +L  L  A +T  A  +  +++E G     ++   ++ G
Sbjct: 528 LTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGG 587

Query: 631 LNQEGNTKQADIL 643
           L +   T +A++L
Sbjct: 588 LCRNNCTDEANML 600



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/587 (22%), Positives = 259/587 (44%), Gaps = 41/587 (6%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+   R+ +   A  +   + + G+  D   +  LI+ + K+G V ++ ++F  M
Sbjct: 124 TYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKM 183

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            +  V   V +Y++L   + +    + ++R   +M+  GI P   TYN +++G+  +   
Sbjct: 184 IEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMW 243

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + ++R F++M S G+   VV  N+ I+   R  ++ EA+ +F  M  K  +P +ISY+T+
Sbjct: 244 KESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTL 303

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + GY A     +   + + M S  + PN   +  L+      G M +   +  +M  + +
Sbjct: 304 LHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGM 363

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   F  ++   C+ G L+ A      M+ + +P     Y  LI+  C      +A 
Sbjct: 364 IP-DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAK 422

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           +L+ +++ K+I   P   +      ++ +I +L   G+  + +     +++ G   + V 
Sbjct: 423 ELISEMMNKDI---PPPGVKY----FSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVT 475

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN+L+ G+   GN + AF ++  M   G+  +   Y  L++ Y + G   DA T    M+
Sbjct: 476 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 535

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P S L+  ++  LF+  R   A ++   M+E G                      
Sbjct: 536 HKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGT--------------------- 574

Query: 537 EALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
                      + S+  +  +L  L     T  A  LL+     +   D+ ++  V+ A+
Sbjct: 575 -----------TVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 623

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           L  G+   A  +   I   G V    + + +I+ L +E + ++AD L
Sbjct: 624 LKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNL 670



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 225/513 (43%), Gaps = 11/513 (2%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           F++ +E++   + D  T+  +I+ L +  ++  +  +L  M   G++ +   +  LI  Y
Sbjct: 180 FYKMIEQS--VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGY 237

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
              G+ +ESV++F  M   G+   V + ++    + R  R   AK  F+ M+ +G +P  
Sbjct: 238 STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNI 297

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
            +Y+ +L G+               M S+GI  +   +N +IN Y R   MD+A  +F +
Sbjct: 298 ISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFED 357

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M+ K + P  +++ T+I     + R DDAL  F+ M    V P+   Y  L+ G C+ G+
Sbjct: 358 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGE 417

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           +V+ ++++ EM+ + IPP     F  ++    K G +    D++  M++         + 
Sbjct: 418 LVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFN 477

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            L+E +C     + A  LLD +    I + P   +      Y  ++   C NG+   A  
Sbjct: 478 SLMEGYCLVGNMEEAFALLDAMA--SIGIEPNCYI------YGTLVDGYCKNGRIDDALT 529

Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            FR ++ KGV    V +N ++ G  +     +A ++   M   G       Y  ++    
Sbjct: 530 VFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLC 589

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           R     +A   L+ +           F  V+ ++ + GR Q A  +  ++   G+   + 
Sbjct: 590 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVH 649

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
               ++  L+     EEA      + +SG  P+
Sbjct: 650 TYNLMISNLIKEESYEEADNLFISVEKSGRAPD 682



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/155 (20%), Positives = 68/155 (43%), Gaps = 2/155 (1%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M + G       + V++    +     E+  + + +  + V+  + +++ +   +L+ G
Sbjct: 568 EMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVG 627

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   AK  F  + + G+ PT HTYN+M+         E A   F  ++  G + D    N
Sbjct: 628 RRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLN 687

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKN--IEPTVIS 233
            ++    +  ++ +A    + + E N  +E + IS
Sbjct: 688 HIVRMLLKKAEVAKASNYLSIIDENNLTLEASTIS 722


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 146/619 (23%), Positives = 266/619 (42%), Gaps = 59/619 (9%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL++F+ +  +  F H   T+  MIE L    +++  + +L  M  +G+   ED+F  +I
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            SY + G  ++++K F  M+   V+ +VK Y+ +   +L   R+ M    ++ M  +G+E
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TYN++L     + +++ A +   +M S+G   D V+Y T+I+   +  K+ EA +L
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
                  +  P+V  Y  +I G       ++A ++ DEM +  + PN ++YT ++  L D
Sbjct: 239 -----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           AG +     VL +M  R   P  ++    + G   K G  + A D    MIR  +     
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS-HEALDFWDRMIREGVVPNVV 352

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  L+   C       A+ + ++               ME       I   C N +T  
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQ---------------ME-------INGCCPNVRT-- 388

Query: 399 AEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                             ++ LI G++K G+ D A E+   M   G   +  AY C+++ 
Sbjct: 389 ------------------YSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV 430

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             R      A   +++M  +   P +  F + ++ L   GRV  A +V   M   G   N
Sbjct: 431 LCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPN 490

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLD 575
                ++L++LL      EA G +  M   G   ++  +++++      G    A++LL 
Sbjct: 491 TTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLG 550

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK----SSDKLIAGL 631
             + R    D  +   V+DA    GK     +I  ++M++     W     +   LI+G+
Sbjct: 551 KMVVRGTKPDAITVNIVIDAYCKQGKV----NIAIQLMDRLSAGKWHPDIIAYTSLISGI 606

Query: 632 NQEGNTKQADILSRMIRGE 650
                 ++A +  R +  E
Sbjct: 607 CTHIGVEEAIVYLRRMLSE 625



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 122/513 (23%), Positives = 217/513 (42%), Gaps = 21/513 (4%)

Query: 144 MAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
           +A  YF  +  S+  + T  TY +M+       +++      + MK  GIS     + ++
Sbjct: 58  LALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISV 117

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  Y R    ++A K F  M++  ++PTV  Y  ++   +   R      I+  MK   +
Sbjct: 118 IGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGM 177

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +PN  TY  LL  LC   ++    K+L EM  +   P D   +  L+   CK G +  A 
Sbjct: 178 EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDP-DEVSYTTLISSLCKLGKVKEAR 236

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           + L      S+P     Y  LI   CK   ++ A +LLD+++ K I        D    S
Sbjct: 237 E-LAMSFTPSVPV----YNALINGVCKEYTFEEAFQLLDEMMNKGI--------DPNVIS 283

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  +I  L   G    +     ++  +G    +  F +LI+G   +G    A +    M 
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           R GV  +  AY  L+     K    DA +  + M  +G  P    + ++++   + G + 
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            AS V   M+  G   N+     +++ L       +A   I+ M      PN   F++ +
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
             L   G+   A+K+ D      C  +  +Y ++LD+LL   +   A+ ++  +  +G  
Sbjct: 464 KGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIE 523

Query: 619 TDWKSSDKLIAGLNQEGNTKQA-DILSRM-IRG 649
            +  + + +I G    G   +A ++L +M +RG
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRG 556



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 146/324 (45%), Gaps = 11/324 (3%)

Query: 25  LVYNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN L HG    ++   A+  F  +E  G   + R T+  +I+   + G L+ A  +  
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR-TYSALIDGYAKAGDLDGASEVWN 410

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G   +   +  +++   +  +  ++  + + M+      +  +++   K +   G
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A + F++M + G  P   TYN +L       +   A    +DM+ RGI L++VTYN
Sbjct: 471 RVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYN 530

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+I GY     + EA +L  +M  +  +P  I+   +I  Y    + + A+++ D + + 
Sbjct: 531 TIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAG 590

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH--- 317
              P+ + YT+L+ G+C    + E    LR M+   I P   +  + +  +    GH   
Sbjct: 591 KWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGA 650

Query: 318 ---LNAAADVLKAMIRLSIPTEAG 338
              L+A++ +    + L I  EAG
Sbjct: 651 VQFLDASSIMQPKFVVLIITKEAG 674


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 168/701 (23%), Positives = 294/701 (41%), Gaps = 81/701 (11%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q    LV  +LH  KN E A+ FF W      F H   T+    E L R G+   A  + 
Sbjct: 54  QLSQRLVGVILHMVKNGESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLF 113

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +   + +  D   + +LI      G ++ +  +++ M   G+   V +   L   + + 
Sbjct: 114 KEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKS 173

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G   +A RYF KM S    P   T+ +++ G F +++++ A  +FE+MK   I  +  TY
Sbjct: 174 GNLELALRYFEKMSS---IPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIP-NNWTY 229

Query: 200 NTMINGYNRFKKMDEAEKLFAE-------------------------------MKEKNIE 228
             +ING  +  K+ EAE++  E                               MK K  +
Sbjct: 230 TVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQ 289

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
              ++Y T+I G+  ++  D A  + +EMKS D  P+  TY  L+ GLC A ++ E + +
Sbjct: 290 GDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDL 349

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L  +        +   +  L+    K+  +N A  +   M+      +   Y  LI   C
Sbjct: 350 LGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLC 409

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
            A     A   L+++V K+I+  P+  +      Y+ +I  LC  G+   A   F  ++ 
Sbjct: 410 NAGRASEAHSYLEEMVGKKIL--PKVPV------YSSVISGLCRAGELDAASTVFDSMVA 461

Query: 409 KGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES---YLRKGE 464
            G    +A +N+LI G  K G    A   VK M  RG   D   Y  LI     + R  E
Sbjct: 462 NGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDE 521

Query: 465 PAD-----------------------------AKTALDSMIEDGHSPASSLFRSVMESLF 495
             D                             A+  L  ++  G+SP +  + +V+ESL 
Sbjct: 522 ACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLC 581

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           ++  +  A ++++ M+  G+K +   V  ++ A+  +     A+  ++ M++ GS P+  
Sbjct: 582 KENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVG 641

Query: 554 -FDSLLSVLSEKGK-TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
            + +LL+ L + GK + A V L        C  D   Y  ++ A     +   A ++L +
Sbjct: 642 TYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQE 701

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEM 651
           +  K G+    + + L+ GL +  N +   ++L  M R E 
Sbjct: 702 LKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEF 742



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 215/512 (41%), Gaps = 54/512 (10%)

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
           G +GK  H   +L DM +KG Q D   +  LI  + +   +  + ++ + MK       +
Sbjct: 271 GDMGKAYH---LLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDI 327

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
            +YD L   + R  R   A+     + +E    P   +YN ++ GF  + ++  A + F 
Sbjct: 328 FTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFL 387

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M + G   DVVTY+T+I G     +  EA     EM  K I P V  Y+++I G     
Sbjct: 388 EMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAG 447

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             D A  +FD M +   +PN   Y +L+ GLC  G++ + +  ++EM ER   P D   +
Sbjct: 448 ELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSP-DGVTY 506

Query: 306 MKLLGVQCKSGHLNAAAD--------------------------------VLKAMIRLSI 333
             L+   C+    + A D                                VL+ ++    
Sbjct: 507 GTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGN 566

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
              A  Y  +IE+ CK      A +LL+ ++   I  +P      + S+ + ++  +C  
Sbjct: 567 SPTAFFYATVIESLCKENNLAEARQLLEDMIGAGI--KP------DGSTVDALVGAMCRQ 618

Query: 394 GQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIV-KIMGRRGVPRDADA 451
            +   A  F  ++++ G    V  ++ L+    K G P  A  ++ +++       D   
Sbjct: 619 DKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELW 678

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y+ LI +Y  + +  +A+  L  +       +   + ++++ LF    +Q    +++ M 
Sbjct: 679 YVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREM- 737

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRID 543
               K N  +V +    +L++G     LG+ D
Sbjct: 738 ----KRNEFVVNEATFNILIQGFCR--LGQTD 763



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 196/451 (43%), Gaps = 13/451 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   +  ++N A  + L+M   G   D   +  LI      G   E+    + M    
Sbjct: 369 LIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKK 428

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +   V  Y ++   + R G    A   F+ M++ G +P    YN +++G   + +L  A 
Sbjct: 429 ILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAK 488

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              ++M  RG S D VTY T+I G  R+ + DEA  L+    E+ IE +  S   +I   
Sbjct: 489 LRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL 548

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             +E+A   LR+   + +    P A  Y  ++  LC    + E +++L +M+   I P D
Sbjct: 549 RCLEQAQRVLRV---VLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKP-D 604

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            S    L+G  C+      A   L+ M+RL      G Y  L+    KA     A  +L 
Sbjct: 605 GSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLR 664

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPVAFNNL 420
           +L+         ++   +   Y  +I    +  Q  +A    ++L  K G+   VA+N L
Sbjct: 665 RLIS-------HTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTL 717

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           ++G  +  N    +E+++ M R     +   +  LI+ + R G+   A   L  M +   
Sbjct: 718 LKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVL 776

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +P++++ + +++ L    R Q +  ++K  V
Sbjct: 777 TPSAAIIKFLVDELARAEREQESKDLVKRPV 807


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/554 (22%), Positives = 250/554 (45%), Gaps = 17/554 (3%)

Query: 25  LVYN-VLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN V+HG         A   F  + + G+   D  T+  +I+ L +   ++ A  +L 
Sbjct: 228 VTYNTVIHGLFREGEVSKACNLFHEMMQQGVV-PDVVTYTSIIDALCKARAMDKAELVLR 286

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G Q ++  +  +I  Y   G  +E+  +F  M   G+  ++ + ++    + + G
Sbjct: 287 QMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHG 346

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A  +F+ M ++G +P   TY+V+L G+         +  F  M+  GI  D   +N
Sbjct: 347 KSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFN 406

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+ Y +   MDE   +F +M+E+ + P   +Y  +I  +  + R  DA+  F++M + 
Sbjct: 407 IVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            +KP  + Y +L+ G C  G +V+ ++++ EM+ R IP  +   F  ++   CK G +  
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A D+   +I +    +   +  LI+ +      ++A  +LD ++   I        + + 
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGI--------EPDV 578

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            SYN +I   C NG+     I F +++ KGV    + +  ++ G   +G    A ++   
Sbjct: 579 VSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G   D      ++    R     +A      +         ++  ++++++++  +
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRK 698

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
            + A  +  S+   G+  N      +++ LL  G VEEA     LM +SG  P+    + 
Sbjct: 699 REEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNY 758

Query: 557 LLSVLSEKGKTIAA 570
           ++ VL EKG+ + A
Sbjct: 759 IIRVLLEKGEIVKA 772



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/547 (23%), Positives = 244/547 (44%), Gaps = 15/547 (2%)

Query: 78  ILLDMPKK--GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
           +L  M KK  G   +   +  +I    ++G V ++  +F  M Q GV   V +Y ++   
Sbjct: 212 LLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDA 271

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           + +      A+    +M+S G +P + TYN M+ G+ +S + +     F +M S+G+  +
Sbjct: 272 LCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPN 331

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           +VT N+ ++   +  K  EA + F  M  K  +P +++Y+ ++ GY       D L +F+
Sbjct: 332 IVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFN 391

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
            M+   +  +   +  ++      G M E   +  +M E+ + P D   +  ++    + 
Sbjct: 392 SMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIP-DACTYGIVIAAFSRM 450

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G L  A D    MI + +  E   Y  LI+ FC      +A +L+ +++ + I  RP   
Sbjct: 451 GRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIP-RPNIV 509

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAF 434
                  +N +I  LC  G+  +A   F  ++  G   D + FN+LI G+   G  + AF
Sbjct: 510 F------FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAF 563

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            ++  M   G+  D  +Y  LI+ Y R G   D       M+  G  P +  +  ++  L
Sbjct: 564 GVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGL 623

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG---RIDLMMQSGSV 551
           F DGR   A ++   M+E G   ++     IL  L      +EA+    ++  M    ++
Sbjct: 624 FNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNI 683

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
              ++++  + +  K   A +L D       + + ++Y  ++  LL  G    A + +F 
Sbjct: 684 AIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADN-MFS 742

Query: 612 IMEKGGV 618
           +MEK G 
Sbjct: 743 LMEKSGC 749


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 234/498 (46%), Gaps = 22/498 (4%)

Query: 28  NVLHGAKNS---EHALQFFRWVERAGL----FNHDRETHLKMIEILGRVGKLNHARCILL 80
           +++HG  +S   + A+ F + V   G+       D  T+  +++     G L     +L 
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLD 330

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M + G+  D  ++ +LI +Y K+G V E++ +F  M+Q G+     +Y A+  ++ + G
Sbjct: 331 LMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSG 390

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A  YF +M+ EG+ P    YN ++ G     K E A     +M  RGI L+ + +N
Sbjct: 391 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 450

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++I+ + +  ++ E+EKLF  M    ++P +I+Y+T+I GY    + D+A+++   M S 
Sbjct: 451 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSV 510

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            +KPN VTY  L+ G C   +M +   + +EM    + P   +  + L G+  ++    A
Sbjct: 511 GLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLF-QTRRTAA 569

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A ++   +       E   Y I++   CK ++ D A+++   L   +        L +EA
Sbjct: 570 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMD--------LKLEA 621

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            ++N MI  L   G+ G+A+  F      G++ +   +  +      +G  +   ++   
Sbjct: 622 RTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 681

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G   D+     ++   L++GE   A T L SMI++ H    +   S+   L   G+
Sbjct: 682 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGK 740

Query: 500 VQTASRVM----KSMVEK 513
            Q   R +    KS +E 
Sbjct: 741 YQEYHRFLPEKYKSFIES 758



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 122/545 (22%), Positives = 243/545 (44%), Gaps = 18/545 (3%)

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTY 164
           +++  +FD + + G   S+   +     + R        RY N+M   G   + PT HTY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTY 90

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA-EKLFAEMK 223
            +++     + +L+       ++  +G  ++ +T+  ++ G    K+  +A + +   M 
Sbjct: 91  AILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEM---KSFDVKPNAVTYTALLPGLCDAG 280
           E +  P V S T ++KG     R+ +AL +   M   +     P+ V+YT ++ G    G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEG 210

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
              +      EM++R I P D   +  ++   CK   ++ A +VL +M++  +      Y
Sbjct: 211 DSGKAYSTYHEMLDRRISP-DVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTY 269

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             ++  +C +     AI  L K+    +   P   L+ + ++Y  ++Q     G      
Sbjct: 270 TSIMHGYCSSGQPKEAIGFLKKVRSDGV--EPDG-LEPDIATYCTLLQGYATKGALVGMH 326

Query: 401 IFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
                +++ G+  D   +N LI  ++K+G  D A  +   M ++G+  DA  Y  +I   
Sbjct: 327 ALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGIL 386

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            + G   DA    + MI++G SP + ++ S++  L    + + A  ++  M+++G+  N 
Sbjct: 387 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 446

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                I+++    G V E+    DLM++ G  P+   + +L+      GK   A+KLL  
Sbjct: 447 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG 506

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGLNQEG 635
            +      +  +Y  +++      +  +A  +LFK ME  GV+ D  + + ++ GL Q  
Sbjct: 507 MVSVGLKPNTVTYRTLINGYCKISRMGDAL-VLFKEMESSGVSPDIITYNIILQGLFQTR 565

Query: 636 NTKQA 640
            T  A
Sbjct: 566 RTAAA 570



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 145/654 (22%), Positives = 269/654 (41%), Gaps = 95/654 (14%)

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYG---KKGIVQESVKIFDIMKQLGVE 123
           G+V    H   IL+     G     D  ++   + G   KKG   E++    ++K L  +
Sbjct: 81  GKVTPTVHTYAILI-----GCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCAD 135

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
           +  ++ DA+  ++LRR            M      P   +  ++L G     + + A+  
Sbjct: 136 K--RTSDAM-DIVLRR------------MTELSCMPDVFSCTILLKGLCDENRSQEALEL 180

Query: 184 ---FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
                D +  G + DVV+Y T+ING+ +     +A   + EM ++ I P V++Y+++I  
Sbjct: 181 PHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAA 240

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP- 299
               +  D A+ +   M    V PN  TYT+++ G C +G+  E    L+++    + P 
Sbjct: 241 LCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPD 300

Query: 300 ---KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
               D + +  LL      G L     +L  M+R  I  +   Y ILI  + K    D A
Sbjct: 301 GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV----- 411
           + +  K+         Q  L+ +A +Y  +I  LC +G+   A ++F Q++ +G+     
Sbjct: 361 MLVFSKM--------RQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 412

Query: 412 -------------------------------LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
                                          L+ + FN++I  H KEG    + ++  +M
Sbjct: 413 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 472

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            R GV  D   Y  LI+ Y   G+  +A   L  M+  G  P +  +R+++    +  R+
Sbjct: 473 VRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRM 532

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNFDSL 557
             A  + K M   GV  ++     IL+ L        A      + +SG+   +  ++ +
Sbjct: 533 GDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 592

Query: 558 LSVLSEKGKTIAAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L  L +   T  A+++  + CL  D  ++  ++  ++DALL  G+   A  +       G
Sbjct: 593 LHGLCKNKLTDDALRMFQNLCL-MDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNG 651

Query: 617 GVTDW----------------KSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
            V ++                +  D+L   +   G T  + +L+ ++R  + RG
Sbjct: 652 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 705



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 120/568 (21%), Positives = 246/568 (43%), Gaps = 42/568 (7%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVE--RAGLFNHDRETHLKMIEIL 66
           R   ++  +   F   ++   L     S+ AL+    +   R G    D  ++  +I   
Sbjct: 147 RRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGF 206

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
            + G    A     +M  + +  D   +  +I +  K   + +++++   M + GV  + 
Sbjct: 207 FKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNC 266

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR-----HTYNVMLWGFFLSLKLETAI 181
           ++Y ++       G+   A  +  K+ S+G+EP        TY  +L G+     L    
Sbjct: 267 RTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMH 326

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              + M   GI  D   YN +I  Y +  K+DEA  +F++M+++ + P  ++Y  +I   
Sbjct: 327 ALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGIL 386

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R +DA+  F++M    + P  + Y +L+ GLC   K    ++++ EM++R I    
Sbjct: 387 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-- 444

Query: 302 NSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           N++F   ++   CK G +  +  +   M+R+ +  +   Y  LI+ +C A   D A+KLL
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLL 504

Query: 361 DKLVEKEIILRPQSTL----------------------DMEAS-------SYNPMIQHLC 391
             +V   + L+P +                        +ME+S       +YN ++Q L 
Sbjct: 505 SGMV--SVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLF 562

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
              +T  A+  + ++ + G  ++   +N ++ G  K    D A  + + +    +  +A 
Sbjct: 563 QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEAR 622

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +  +I++ L+ G   +AK    +   +G  P    +R + E++   G ++   ++  SM
Sbjct: 623 TFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 682

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEA 538
            + G   +  ++  I+  LL RG +  A
Sbjct: 683 EDNGCTVDSGMLNFIVRELLQRGEITRA 710



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 121/535 (22%), Positives = 213/535 (39%), Gaps = 52/535 (9%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           AG       T+  +I    R  +L+     L ++ KKG + +   F  L++         
Sbjct: 80  AGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTS 139

Query: 109 ESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML---SEGIEPTRHTY 164
           +++ I    M +L     V S   L K +    R   A    + M      G  P   +Y
Sbjct: 140 DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSY 199

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
             ++ GFF       A   + +M  R IS DVVTY+++I    + + MD+A ++   M +
Sbjct: 200 TTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVK 259

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV-----TYTALLPGLCDA 279
             + P   +YT+++ GY +  +  +A+    +++S  V+P+ +     TY  LL G    
Sbjct: 260 NGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATK 319

Query: 280 GKMVEVQKVLREMVERYIPP----------------------------------KDNSVF 305
           G +V +  +L  MV   I P                                   D   +
Sbjct: 320 GALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTY 379

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             ++G+ CKSG +  A    + MI   +      Y  LI   C    ++RA +L+ ++++
Sbjct: 380 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 439

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
           + I L            +N +I   C  G+  ++E  F  +++ GV  D + ++ LI G+
Sbjct: 440 RGICL--------NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 491

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
              G  D A +++  M   G+  +   Y  LI  Y +     DA      M   G SP  
Sbjct: 492 CLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDI 551

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             +  +++ LF+  R   A  +   + E G +  L     IL  L      ++AL
Sbjct: 552 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 606


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 138/598 (23%), Positives = 263/598 (43%), Gaps = 77/598 (12%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK-------- 84
            + +  AL+ F  V R      + + +  +I +L        ARC++ D+ +        
Sbjct: 47  CRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRS 106

Query: 85  -------------KGVQWDEDMFEVLIESYGKKGIVQESVKI------------------ 113
                        +  ++  ++F VLI ++ + G+V+E++ +                  
Sbjct: 107 RICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLD 166

Query: 114 -------FDIMKQL-------GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
                  FD M ++       G   +V +Y  L     R+G ++ A R F++M+ + I P
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
           T   Y +++ G     ++  A   F  M++ G+  ++ TYNTM++GY +   + +A +L+
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
            EM    + P V+++  +I G    +    A +   +M SF V PN   Y  L+ G C A
Sbjct: 287 QEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
           G + E   +  E+ +  I P D   +  L+   C    +  A  +L+ M +      A  
Sbjct: 347 GNLSEALSLHSEIEKHEILP-DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI+ +CK    ++AI++  ++ EK I        +    +++ +I   C  G+   A
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGI--------EPNIITFSTLIDGYCKAGKMEAA 457

Query: 400 EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
              + +++ KG+L D VA+  LI GH K+GN   AF + K M   G+  +     CLI+ 
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517

Query: 459 YLRKGEPAD------AKTALDSMIEDGH-------SPASSLFRSVMESLFEDGRVQTASR 505
             + G  +D      AKT  D+     +       SP   ++ ++++ L  DGR+  AS+
Sbjct: 518 LCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASK 577

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
               M   G++ ++     I++      H+ + +     +++ G +PN  S+  VL++
Sbjct: 578 FFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN-SSVYRVLAK 634



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/472 (23%), Positives = 215/472 (45%), Gaps = 23/472 (4%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+   R G    A  +  +M +K +     ++ +LI     +  + E+  +F  M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +  G+  ++ +Y+ +     +      A   + +ML +G+ P   T+ +++ G   + ++
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            +A +F  DM S G+  ++  YN +I+GY +   + EA  L +E+++  I P V +Y+ +
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           IKG   V+R ++A  +  EMK     PNAVTY  L+ G C  G M +  +V  +M E+ I
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +   F  L+   CK+G + AA  +   M+   +  +   Y  LI+   K      A 
Sbjct: 435 EP-NIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQL---------- 406
           +L  ++  +E  L P         + + +I  LC +G+   A ++F  +           
Sbjct: 494 RLHKEM--QEAGLHPN------VFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 407 -MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            + + +  P  V +  LI+G   +G    A +    M   G+  D    I +I+ + R  
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAM 605

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
              D       +++ G  P SS++R + +   E G +++A R  + +   G+
Sbjct: 606 HLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 196/449 (43%), Gaps = 39/449 (8%)

Query: 21  FDHNLVYNVL----HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           F   ++Y +L     G      A   FR +  +G+   +  T+  M++   ++  +  A 
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLP-NLYTYNTMMDGYCKIAHVKKAL 283

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            +  +M   G+  +   F +LI+   K   +  + K    M   GV  ++  Y+ L    
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            + G    A    +++    I P   TY++++ G     ++E A    ++MK +G   + 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VTYNT+I+GY +   M++A ++ ++M EK IEP +I+++T+I GY    + + A+ ++ E
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    + P+ V YTAL+ G    G   E  ++ +EM E  + P   ++   + G+ CK G
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL-CKDG 522

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            +   +D +K  +  +     G          K    DR+            +  P   +
Sbjct: 523 RI---SDAIKLFLAKTGTDTTGS---------KTNELDRS------------LCSPNHVM 558

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN--LIRGHSKEGNPDSAF 434
                 Y  +IQ LC +G+  KA  FF  +   G L P  F    +I+GH +  +     
Sbjct: 559 ------YTALIQGLCTDGRIFKASKFFSDMRCSG-LRPDVFTCIVIIQGHFRAMHLRDVM 611

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKG 463
            +   + + G+  ++  Y  L + Y   G
Sbjct: 612 MLQADILKMGIIPNSSVYRVLAKGYEESG 640



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/427 (20%), Positives = 183/427 (42%), Gaps = 53/427 (12%)

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           + + ++     P V  +  +I  +  +   ++AL ++ +M   DV P       +L GL 
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             G+   + KV  +MV R                        A+ +V+            
Sbjct: 170 KKGRFDTMWKVYGDMVAR-----------------------GASPNVVT----------- 195

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             YG LI+  C+   + +A +L D+++EK+I   P   +      Y  +I+ LC   +  
Sbjct: 196 --YGTLIDGCCRQGDFLKAFRLFDEMIEKKIF--PTVVI------YTILIRGLCGESRIS 245

Query: 398 KAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +AE  FR +   G+L  +  +N ++ G+ K  +   A E+ + M   G+  +   +  LI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           +   +  E   A+  L  M   G  P   ++  +++   + G +  A  +   + +  + 
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            ++   + +++ L     +EEA G +  M + G +PN   +++L+    ++G    A+++
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                 +    ++ ++  ++D    AGK   A  +  +++ KG + D  +   LI G  +
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 634 EGNTKQA 640
           +GNTK+A
Sbjct: 486 DGNTKEA 492



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 37/271 (13%)

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           A N ++ G  K+G  D+ +++   M  RG   +   Y  LI+   R+G+   A    D M
Sbjct: 160 ACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM 219

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           IE    P   ++  ++  L  + R+  A  + ++M   G+  NL     +++      HV
Sbjct: 220 IEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHV 279

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS---- 588
           ++AL     M+  G +PN   F  L+  L +  + ++A K L         ID+AS    
Sbjct: 280 KKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFL---------IDMASFGVV 330

Query: 589 -----YEKVLDALLAAGKTLNAYSI--------------LFKIMEKG--GVTDWKSSDKL 627
                Y  ++D    AG    A S+               + I+ KG  GV   + +D L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 628 IAGLNQEGNTKQADILSRMIRGEMSRGSQKE 658
           +  + ++G    A   + +I G    G+ ++
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 200/420 (47%), Gaps = 11/420 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A++ F  + + G F     T+  +I+ L ++G   +A  +L  M +KG + D   +  +I
Sbjct: 160 AVKLFDEIGKMG-FAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +S  K     E++  F  M   G+  +V +Y ++       G+   A   F +M+   + 
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   T+ +++ G      +  A R FE M   G+  D  TY+ +++GY    +MDEA+KL
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M  K   P+V  Y  +I G+    R ++A  +  EM   D+ P+ VTY+ L+ G C 
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           AG+    QK+ +EM    + P D+  +  LL   CK GHL+ A  +LKAM    I     
Sbjct: 399 AGRPQVAQKLFKEMCSYGLLP-DSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHIC 457

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y ILI+  C     + A +L   L  K I  +P         +Y  MI  L   G + +
Sbjct: 458 IYNILIQGMCNFGKLEAARELFSNLFVKGI--QP------SVVTYTVMISGLLKEGLSNE 509

Query: 399 AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A   FR+++  G L +   +N  I+G  + G+P +A  +++ M  RG   D+  +  L++
Sbjct: 510 ACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 216/448 (48%), Gaps = 13/448 (2%)

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           KM   G++PT  T+  +L G     K+  A++ F+++   G +  ++TY T+I G  +  
Sbjct: 131 KMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIG 190

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
               A +L  +M+EK  +P V++Y T+I       RA++A+  F EM    + PN VTY+
Sbjct: 191 HTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYS 250

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           ++L G C+ G++ E   + ++M+ R + P +   F  L+   CK G +  A  V + M  
Sbjct: 251 SILHGFCNLGQLNEATSLFKQMIGRNVMP-NTVTFTILVDGLCKEGMILEARRVFEMMTE 309

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +  +A  Y  L++ +C     D A KL D +V K     P   +      YN +I   
Sbjct: 310 NGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKG--FAPSVRV------YNILINGH 361

Query: 391 CHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C + +  +A+    ++  + +  D V ++ L++G  + G P  A ++ K M   G+  D+
Sbjct: 362 CKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDS 421

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  L++   + G   +A   L +M E    P   ++  +++ +   G+++ A  +  +
Sbjct: 422 ITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSN 481

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           +  KG++ ++     ++  LL  G   EA      M+ +G +PN   ++  +      G 
Sbjct: 482 LFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGD 541

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLD 594
              AV+L++  +GR    D ++++ +LD
Sbjct: 542 PSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 208/447 (46%), Gaps = 45/447 (10%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K G+Q     F  L+     K  + ++VK+FD + ++G   S+ +Y  + K + + G 
Sbjct: 132 MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGH 191

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A +   KM  +G +P    YN ++       +   A+ FF +M  +GI  +VVTY++
Sbjct: 192 TTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSS 251

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G+    +++EA  LF +M  +N+ P  +++T ++ G        +A R+F+ M    
Sbjct: 252 ILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENG 311

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQK---------------------------------- 287
           V+P+A TY+AL+ G C   +M E QK                                  
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371

Query: 288 -VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +L EM +R + P D   +  L+   C++G    A  + K M    +  ++  Y IL++ 
Sbjct: 372 TLLSEMYDRDLTP-DTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK    D A +LL  + E +I   P   +      YN +IQ +C+ G+   A   F  L
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKI--EPHICI------YNILIQGMCNFGKLEAARELFSNL 482

Query: 407 MKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
             KG+    V +  +I G  KEG  + A E+ + M   G   ++  Y   I+ +LR G+P
Sbjct: 483 FVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDP 542

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVME 492
           ++A   ++ M+  G S  SS F+ +++
Sbjct: 543 SNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 185/376 (49%), Gaps = 10/376 (2%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           ++ +ALQ  + +E  G    D   +  +I+ L +  + N A     +M  +G+  +   +
Sbjct: 191 HTTNALQLLKKMEEKGC-KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTY 249

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             ++  +   G + E+  +F  M    V  +  ++  L   + + G  + A+R F  M  
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE 309

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G+EP  +TY+ ++ G+ L  +++ A + F+ M  +G +  V  YN +ING+ + ++++E
Sbjct: 310 NGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNE 369

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A+ L +EM ++++ P  ++Y+T+++G+    R   A ++F EM S+ + P+++TY+ LL 
Sbjct: 370 AKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLD 429

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GLC  G + E  ++L+ M E  I P    ++  L+   C  G L AA ++   +    I 
Sbjct: 430 GLCKHGHLDEAFRLLKAMQESKIEPHI-CIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                Y ++I    K  + + A ++  K+V    +  P S       +YN  IQ    NG
Sbjct: 489 PSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCL--PNS------CTYNVAIQGFLRNG 540

Query: 395 QTGKAEIFFRQLMKKG 410
               A     +++ +G
Sbjct: 541 DPSNAVRLIEEMVGRG 556



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/542 (19%), Positives = 213/542 (39%), Gaps = 88/542 (16%)

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  IS   +T     + YN    + +A   F ++      P V+ +  ++   V  +   
Sbjct: 27  TTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYS 86

Query: 249 DALRIFDEMKSFDVKPNAVTYT-------------------------------------A 271
             + +  +M   +++PN  T T                                      
Sbjct: 87  TVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGT 146

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           LL GLC   K+++  K+  E+ +    P   +    + G+ CK GH   A  +LK M   
Sbjct: 147 LLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL-CKIGHTTNALQLLKKMEEK 205

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
               +   Y  +I++ CK    + A+    ++V++ I   P + +     +Y+ ++   C
Sbjct: 206 GCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGI---PPNVV-----TYSSILHGFC 257

Query: 392 HNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           + GQ  +A   F+Q++ + V+ + V F  L+ G  KEG    A  + ++M   GV  DA 
Sbjct: 258 NLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAY 317

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPA--------------------------- 483
            Y  L++ Y  + +  +A+   D M+  G +P+                           
Sbjct: 318 TYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEM 377

Query: 484 --------SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                   +  + ++M+   + GR Q A ++ K M   G+  +    + +L+ L   GH+
Sbjct: 378 YDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHL 437

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           +EA   +  M +S   P+   ++ L+  +   GK  AA +L      +     + +Y  +
Sbjct: 438 DEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVM 497

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMS 652
           +  LL  G +  A  +  K++  G + +  + +  I G  + G+   A    R+I   + 
Sbjct: 498 ISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNA---VRLIEEMVG 554

Query: 653 RG 654
           RG
Sbjct: 555 RG 556


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 143/630 (22%), Positives = 282/630 (44%), Gaps = 26/630 (4%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q DH L+ N  +G +  +H+ +      RA     +  ++  +I        L  A   +
Sbjct: 192 QRDHTLLVN-YYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACV 250

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M  +GV  +   + V+I  YG+ G V+ + + F          +   Y+ +     + 
Sbjct: 251 EEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKA 310

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR---GISLDV 196
           G    A+     M  +G+E T   YN+++ G+     ++  +  F  +K+R   G+S  V
Sbjct: 311 GNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTV 370

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           V+Y  +IN Y++  KMD+A ++  EM+++ I+    +Y+ +I GYV +    +A  +F++
Sbjct: 371 VSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFED 430

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M +  +KP+ +TY  L+   C  G+M    ++L  M     PP   +  + + G   K G
Sbjct: 431 MSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFM-KIG 489

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L  A + ++ M        A  Y +++    +A   DRA  ++D++V   +   P    
Sbjct: 490 DLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGV--HPNE-- 545

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                SY  +I+     G  G A  +F ++ + G+  D +A+ +L++   K G   S   
Sbjct: 546 ----RSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLA 601

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           I   M   GVP +   Y  L++ + ++G+  +A   +  M  +G +P    + S + +  
Sbjct: 602 ITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACC 661

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           + G +  A+  ++ M ++GV+ NL     ++       + E+AL   D M  +G +P+  
Sbjct: 662 KAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKP 721

Query: 554 -----FDSLLSVLSEKGKTI--AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
                  SLLS  +   +T+    +++    + +   +D A+ +     L+ A +     
Sbjct: 722 LYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQGICVDFATAKHWQRFLIKAERQSGD- 780

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
             L + +E+    DWK++ +      QE N
Sbjct: 781 --LTRAVERIFPADWKAAVEEAKRAAQEAN 808



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 81/378 (21%), Positives = 162/378 (42%), Gaps = 24/378 (6%)

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
           DA K+V+  K +++  +R     D+++ +   G   K G  ++A    ++M    I    
Sbjct: 176 DARKVVDAFKRIKKPKQR-----DHTLLVNYYG---KRGDKHSARAAFESMRAAGIEPNV 227

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y  LI  +  A+    AI  ++++ E E        +   A++Y+ +I      G   
Sbjct: 228 HSYTNLIHAYAVAQDLRGAIACVEEM-EAE-------GVSPNAATYSVIISGYGRLGDVE 279

Query: 398 KAEIFF-RQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
            AE +F R L +    + V +NN+I  + K GN + A  I+  M  +G+      Y  L+
Sbjct: 280 AAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLM 339

Query: 457 ESYLRK---GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           + Y+      +  +    L +  E G SP    +  ++    + G++  A ++   M ++
Sbjct: 340 DGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQ 399

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G+K N    + I++  +  G    A    + M  +G  P+   ++ L++   + G+   A
Sbjct: 400 GIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRA 459

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           ++LL      DC   L +Y  ++D  +  G    A+  +  +   G      + + ++ G
Sbjct: 460 LELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHG 519

Query: 631 LNQEGN-TKQADILSRMI 647
           L Q G   + A I+  M+
Sbjct: 520 LAQAGQMDRAASIIDEMV 537


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 154/597 (25%), Positives = 274/597 (45%), Gaps = 26/597 (4%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R G  +H   +L +M   G   +   +  +I S   +G   E+ K+ + M+++G+   + 
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIV 259

Query: 128 SYDALFKLILRRGRYMMAKRYFNKM-LSEGI---EPTRHTYNVMLWGFFLSLKLETAIRF 183
           +++     + + G+ + A R F  M + E +   +P   TYN+ML GF      E A   
Sbjct: 260 TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI 319

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F+ MK+   +L + +YN  + G  R  K+ EA  +  EM EKNI+P + SY  ++ G   
Sbjct: 320 FDSMKNSE-TLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCK 378

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
                DA  I   M+   V P+ VTY+ LL G C  GK++E   VLREM++    P   +
Sbjct: 379 YGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYT 438

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
             + LL    K G  + A D+L+ M       +      +I   CKA   D+AI+++  +
Sbjct: 439 CNI-LLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497

Query: 364 VEK---EIILRPQSTLDM------------EASSYNPMIQHLCHNGQTGKAEIFFRQLM- 407
             +    +     S +D+            ++ +Y  +I  LC  G+  +A+    +++ 
Sbjct: 498 WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557

Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KK   D + F+  I  + K+G   SAF ++K M ++G  +    Y  LI+    + +  +
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFE 617

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
               +D M E G  P    + +++  L E G+++ A+ ++  M++KG+  N+     ++ 
Sbjct: 618 IYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIG 677

Query: 528 ALLMR---GHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           A       G  +E L  I L +       +  + + L   G+T+ A +L +  L R   +
Sbjct: 678 AFFKACDFGAAQE-LFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLAL 736

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
               Y  +++ L   GK  +A  IL K+M+K    D  S   +I  L + G+   AD
Sbjct: 737 KNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAAD 793



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 137/603 (22%), Positives = 236/603 (39%), Gaps = 110/603 (18%)

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           +  Y+ LF+  L+  R       +  M    ++P  +T+N+++        LE A   F+
Sbjct: 118 ISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFD 177

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M  +G   +  +   ++ GY R         L  EM+     P  ++Y T+I       
Sbjct: 178 KMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEG 237

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV--ERYIPPKDNS 303
           +  +A ++ ++M+   + P+ VT+   +  LC +G+++E  ++ R+M   E    PK N+
Sbjct: 238 QTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNT 297

Query: 304 VFMKL------------------------------------LGVQCKSGHLNAAADVLKA 327
           V   L                                    LG+  +SG L  A  +L  
Sbjct: 298 VTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGL-VRSGKLLEAHLILNE 356

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL-------------------------DK 362
           M   +I      Y IL+   CK  M+  A  +L                          K
Sbjct: 357 MAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGK 416

Query: 363 LVEKEIILRPQSTLDMEASSY--NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
           ++E   +LR    +    + Y  N ++  L   G+  +AE   + + ++G  LD V  N 
Sbjct: 417 ILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNT 476

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPR-----------------------DADAYICLI 456
           +I G  K GN D A EIV  M  RG                          D+  Y  +I
Sbjct: 477 MINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATII 536

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
               + G   +AK  L  MI    SP S +F + + +  + G++ +A RV+K M +KG  
Sbjct: 537 GGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCN 596

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
           ++L     +++ L     + E  G +D M + G  PN   +++++S LSE GK   A  L
Sbjct: 597 KSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCL 656

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAA-----------------GKTLNAYSILFKIMEKG 616
           LD  L +    ++ ++  ++ A   A                 G   + YS +F  +  G
Sbjct: 657 LDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAG 716

Query: 617 GVT 619
           G T
Sbjct: 717 GET 719



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 222/498 (44%), Gaps = 37/498 (7%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L R GKL  A  IL +M +K ++ +   + +L+    K G+  ++  I  +M++ GV   
Sbjct: 341 LVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPD 400

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y  L     RRG+ + A     +M+  G  P  +T N++L   +   +   A    +
Sbjct: 401 TVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQ 460

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M  RG  LD VT NTMING  +   +D+A ++ + M                +G  ++ 
Sbjct: 461 MMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM--------------WTRGSASLG 506

Query: 246 RADDALRIFDEMKSFDVK-------PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
              ++      +  FD++       P+++TY  ++ GLC  G++ E +K L EM+ + + 
Sbjct: 507 NLGNSF-----IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLS 561

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D+ +F   +   CK G L++A  VLK M +         Y  LI+             
Sbjct: 562 P-DSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYG 620

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AF 417
           L+D++ E+ I   P         +YN +I  L   G+   A     ++++KG+   +  F
Sbjct: 621 LMDEMKERGIF--PN------VYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTF 672

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
             LI    K  +  +A E+ +I       +++  Y  +    L  GE   AK   ++ ++
Sbjct: 673 RILIGAFFKACDFGAAQELFEIALSLCGHKES-LYSFMFNELLAGGETLKAKELFEAALD 731

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
              +  + L+R ++E L +DG++  AS ++  M++K    +      +++ L  RG    
Sbjct: 732 RSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHA 791

Query: 538 ALGRIDLMMQSGSVPNFD 555
           A    + MM+  S  +F+
Sbjct: 792 ADEFAERMMEMASETDFN 809



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 133/282 (47%), Gaps = 2/282 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L +VG+++ A+  LL+M  K +  D  +F+  I +Y K+G +  + ++ 
Sbjct: 528 DSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVL 587

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M++ G  +S+++Y++L + +    +        ++M   GI P  +TYN ++      
Sbjct: 588 KEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEG 647

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL+ A    ++M  +GIS ++ T+  +I  + +      A++LF E+           Y
Sbjct: 648 GKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLY 706

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + M    +A      A  +F+      +      Y  L+  LC  GK+ +   +L +M++
Sbjct: 707 SFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMD 766

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           +     D + FM ++    K G  +AA +  + M+ ++  T+
Sbjct: 767 KQY-SFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 145/626 (23%), Positives = 268/626 (42%), Gaps = 79/626 (12%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  VL    +   +L++F+ +  +G F H   T+  MI+ LGR  +++    +L  M  +
Sbjct: 44  VVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLE 103

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
            V   +++F+ +I+ Y +  + ++ +K+F  +++ G E SVK Y+ +   +L +  + M 
Sbjct: 104 NVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMI 163

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
              +N M SEG+EP   TYNV+L     + K++ A +   +M ++G   D V+Y T+I+ 
Sbjct: 164 NALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISS 223

Query: 206 YNRFKKMD------------------------------EAEKLFAEMKEKNIEPTVISY- 234
             +   +D                              EA  L  EM ++ ++P VISY 
Sbjct: 224 MCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYS 283

Query: 235 ----------------------------------TTMIKGYVAVERADDALRIFDEMKSF 260
                                             T++IKG+    R  DA+ +++ M   
Sbjct: 284 TVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIRE 343

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V PN V Y  L+ GLC  G M E   V  +M +  I P   +    + G   KSG L +
Sbjct: 344 GVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFA-KSGDLVS 402

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A +    MI          Y  +++  C+  M+D+A  L+D ++       P + +    
Sbjct: 403 ACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGC---PPTVI---- 455

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKI 439
            ++N  I+ LC  G+   A     Q+ K   L  +  +N L+ G  +      A  +++ 
Sbjct: 456 -TFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRE 514

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +  R V  D   Y  ++  +   G        L  M+ +G    +    + + +  + G+
Sbjct: 515 LEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGK 574

Query: 500 VQTASRVMKSM-VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           V+TA +V+ ++  EK  + ++     IL  +      EEA+  +  M++ G  PN   ++
Sbjct: 575 VKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWN 634

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRD 581
            L+     K   +  +++LD  +G D
Sbjct: 635 VLVRGFFSKLGHMGPIRILDDIIGMD 660


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 156/636 (24%), Positives = 275/636 (43%), Gaps = 38/636 (5%)

Query: 17  LVPQFDHNL----VYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           +V  FD  L    V  +L G + + + AL+FF+W      F H  E++  ++ ++ R   
Sbjct: 60  IVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARM 119

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM---KQLGVERSVKS 128
              A     D  K          EV++ S    G       IFD++   + + V  S   
Sbjct: 120 YTDAH----DTVK----------EVIMNSRMDMGF--PVCNIFDMLWSTRNICVSGS-GV 162

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           +D LF + +  G    A   F++M +    P   + N +L     S   +   +FF DM 
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             GI+  V TYN MI+   +   ++ + +LF +M+E  + P V++Y ++I GY  V   +
Sbjct: 223 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 282

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +   +F+EMK     P+ +TY  L+   C   KM    +   EM    + P +   +  L
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP-NVVTYSTL 341

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   CK G +  A  +L  M R  +      Y  LI+  CKA     A KLL+ ++    
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML---- 397

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
               Q+ + +   +Y  ++  LC  G+  +AE  FR ++K G+  +   +  L+ G+ K 
Sbjct: 398 ----QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKA 453

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
              + A +I+K M    +  D   Y  +I  +  + +  + K  L+ M   G S    + 
Sbjct: 454 ERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS 513

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            +++++ F+ G+   A    + M + GV+  +     +++ L   G VE A+     M+ 
Sbjct: 514 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLS 573

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  PN   + SL+  L       +A KL D    R    D+ ++  ++D  L  G    
Sbjct: 574 LGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 633

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           A  ++ ++ E     D      L++G +Q G   QA
Sbjct: 634 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQA 669



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 137/563 (24%), Positives = 255/563 (45%), Gaps = 21/563 (3%)

Query: 8   TRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILG 67
           +R++N  R L      N + + L  + N +   +FF  +  AG+      T+  MI+ L 
Sbjct: 184 SRMRN-FRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGI-APSVFTYNVMIDYLC 241

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + G L ++R + + M + G+  D   +  LI+ YGK G ++E   +F+ MK +G    + 
Sbjct: 242 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 301

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L     +  +   A  YF++M + G++P   TY+ ++  F     ++ AI+   DM
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDM 361

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           +  G+  +  TY ++I+   +   + EA KL  +M +  ++  +++YT ++ G     R 
Sbjct: 362 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 421

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +A  +F  M    + PN   YTAL+ G   A +M +  K+L++M E  I P D  ++  
Sbjct: 422 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP-DLILYGS 480

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL---- 363
           ++   C    L     +L+ M    I         +I+ + KA     A+    ++    
Sbjct: 481 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 540

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIR 422
           VE  I+            +Y  +I  LC  G    A  +F +++  G+   VA + +LI 
Sbjct: 541 VEATIV------------TYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 588

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G       +SA ++   M  RG+  D  A+  LI+  L+ G   +A   +  M E     
Sbjct: 589 GLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 648

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
              ++ S++    + G +  A +    M+EKG+     L   +L     RG ++EA+   
Sbjct: 649 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELK 708

Query: 543 DLMMQSGSVPNFDSLLSVLSEKG 565
           + M +      FD+ L+  +E+G
Sbjct: 709 NEMERMAYSFEFDAQLAY-NEQG 730


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 221/467 (47%), Gaps = 50/467 (10%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK---LETAIRFFE 185
           +D  F++++  G    A+++F+K+L+ G+  +  + N+ L    LS K   L   ++ F 
Sbjct: 42  FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTC--LSSKRDMLGMVLKVFS 99

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +    G+  +  +YN ++N   R  K+ EA  L   M+ K   P V+SYTT+I GY  V 
Sbjct: 100 EFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVG 159

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
                +++  EM+   +KPN  TY++++  LC +GK+VE +KVLREM++R + P D+ ++
Sbjct: 160 ELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP-DHVIY 218

Query: 306 MKLLGVQCKSGHLNAA----------------------------------AD-VLKAMIR 330
             L+   CK G+  AA                                  AD +   MI+
Sbjct: 219 TTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIK 278

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
                +   Y  LI+ +CK     +A  L +++V+  I L P         +Y  +   L
Sbjct: 279 KGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQ--IGLTPN------VVTYTALADGL 330

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C +G+   A     ++ +KG+ L+   +N ++ G  K GN   A ++++ M   G+  D 
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  L+++Y + GE   A+  L  M++ G  P    F  +M  L   G+++   R++K 
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
           M+EKG+  N      I++   +R ++  +      M   G VP+ ++
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNT 497



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 249/490 (50%), Gaps = 10/490 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           + E++  ++  L R+GK+  A  +L+ M  KG   D   +  +I+ Y   G +Q+ V++ 
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  G++ ++ +Y ++  L+ + G+ +  ++   +M+  G+ P    Y  ++ GF   
Sbjct: 169 KEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKL 228

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              + A + F +M++R I  D + ++ +I G +   K+ EA+KLF EM +K  EP  ++Y
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           T +I GY  +     A  + ++M    + PN VTYTAL  GLC +G++    ++L EM  
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + +   + S +  ++   CK+G++  A  +++ M    +  +   Y  L++ + K     
Sbjct: 349 KGLQL-NISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMV 407

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
           +A +LL +++++   L+P         ++N ++  LC +G+    E   + +++KG++  
Sbjct: 408 KARELLREMLDRG--LQPT------VVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPN 459

Query: 415 VA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            A +N++++ +    N   + EI + M  +GV  D++ Y  LI+ + +     +A     
Sbjct: 460 AATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHK 519

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+E   +  +S + ++++  F+  ++  A ++ + M  +G+  + ++    ++     G
Sbjct: 520 EMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEG 579

Query: 534 HVEEALGRID 543
           ++E  L   D
Sbjct: 580 NMETTLELCD 589



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 122/246 (49%), Gaps = 6/246 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L + G +  A  ++ +M + G+  D   +  L+++Y K G   E VK  +++
Sbjct: 357 TYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTG---EMVKARELL 413

Query: 118 KQL---GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           +++   G++ +V +++ L   +   G+    +R    ML +GI P   TYN ++  + + 
Sbjct: 414 REMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIR 473

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  +   +  M ++G+  D  TYN +I G+ + + M EA  L  EM EK    T  SY
Sbjct: 474 NNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSY 533

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +IKG+   ++  +A ++F+EM+   +  +A  Y   +    + G M    ++  E +E
Sbjct: 534 NALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIE 593

Query: 295 RYIPPK 300
           + +  K
Sbjct: 594 KCLLDK 599



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/377 (20%), Positives = 156/377 (41%), Gaps = 20/377 (5%)

Query: 276 LCD--AGKMVEVQKVLREMVERYIPP-----KDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           +CD  A   +++       VER I        D  VF     V  ++G LN A      +
Sbjct: 6   ICDFWAKPNLDISNSFTHFVERLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKL 65

Query: 329 IRLSIPTEAGHYGILIENFC-KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           +   +   AG   + +     K +M    +K+  +         PQ  +     SYN ++
Sbjct: 66  LNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEF--------PQLGVCWNTESYNILM 117

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             L   G+  +A     ++  KG + D V++  +I G+   G      ++VK M  +G+ 
Sbjct: 118 NSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLK 177

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            +   Y  +I    + G+  + +  L  M++ G  P   ++ ++++   + G  Q A ++
Sbjct: 178 PNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKL 237

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
              M  + +  +    + ++  L   G V EA    + M++ G  P+   + +L+    +
Sbjct: 238 FSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCK 297

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+   A  L +  +      ++ +Y  + D L  +G+   A  +L ++  KG   +  +
Sbjct: 298 LGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIST 357

Query: 624 SDKLIAGLNQEGNTKQA 640
            + ++ GL + GN  QA
Sbjct: 358 YNTIVNGLCKAGNILQA 374



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 5/266 (1%)

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRG--HSKEGNPDSAFEIVKIM 440
           ++   Q L   G   +A  FF +L+  GV       NL      SK        ++    
Sbjct: 42  FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEF 101

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            + GV  + ++Y  L+ S  R G+  +A   L  M   G  P    + ++++     G +
Sbjct: 102 PQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGEL 161

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
           Q   +++K M  KG+K NL   + I+  L   G V E    +  MM+ G  P+   + +L
Sbjct: 162 QKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTL 221

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +    + G T AA KL      R+ + D  ++  ++  L  +GK + A  +  ++++KG 
Sbjct: 222 IDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGF 281

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADIL 643
             D  +   LI G  + G  K+A  L
Sbjct: 282 EPDEVTYTALIDGYCKLGEMKKAFFL 307



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 4/166 (2%)

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           +  +M SLF  G+++ A  ++  M  KG   ++     I++     G +++ +  +  M 
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
             G  PN   + S++ +L + GK +   K+L   + R    D   Y  ++D     G T 
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIR 648
            AY +  ++  +  V D  +   LI GL+  G   +AD + + MI+
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIK 278


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 218/487 (44%), Gaps = 49/487 (10%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F VLI+     G+V+E+++ F  MK+  V    +S + L     + G+    KR+F  M
Sbjct: 31  LFSVLID----LGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 86

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G +PT  TYN+M+        +E A   FE+MK RG+  D VTYN+MI+G+ +  ++
Sbjct: 87  IGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRL 146

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D+    F EMK+   EP VI+Y  +I  +    +    L  F EMK   +KPN V+Y+ L
Sbjct: 147 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTL 206

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +   C  G M +  K   +M    + P + + +  L+   CK G+L+ A  +   M+++ 
Sbjct: 207 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT-YTSLIDAYCKIGNLSDAFRLANEMLQVG 265

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  LI+  C  E     + LLD++VE +I         +   ++  +I  LC 
Sbjct: 266 VEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDI--------KVTVVTFCVLIDGLCK 317

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           N    KA  +F                                  +I    G+  +A  Y
Sbjct: 318 NKLVSKAIDYFG---------------------------------RISNDFGLQANAAIY 344

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +I+   +  +   A T  + M + G  P  + + S+M+  F+ G V  A  +   MVE
Sbjct: 345 TAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVE 404

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS---EKGKTIA 569
            G+K +L     ++  L     +++A   ++ M+  G  P+    +SVL    E G    
Sbjct: 405 TGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINE 464

Query: 570 AVKLLDF 576
           AV+L  +
Sbjct: 465 AVELQSY 471



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 186/381 (48%), Gaps = 11/381 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  MI+ + + G +  AR +  +M  +G+  D   +  +I+ +GK G + ++V  F+ M
Sbjct: 97  TYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 156

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K +  E  V +Y+AL     + G+      +F +M   G++P   +Y+ ++  F     +
Sbjct: 157 KDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMM 216

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + AI+F+ DM+  G+  +  TY ++I+ Y +   + +A +L  EM +  +E  V++YT +
Sbjct: 217 QQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTAL 276

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G    E   + L + DEM   D+K   VT+  L+ GLC    + +       +   + 
Sbjct: 277 IDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFG 336

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRA 356
              + +++  ++   CK   + AA  + + M +   +P    +  ++  NF +  + + A
Sbjct: 337 LQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLE-A 395

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           + L DK+VE        + + ++  +Y  ++  L H  Q  KA  F  +++ +G+  D V
Sbjct: 396 LALRDKMVE--------TGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 447

Query: 416 AFNNLIRGHSKEGNPDSAFEI 436
              ++++ H + G  + A E+
Sbjct: 448 LCISVLKKHYELGCINEAVEL 468



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 90/405 (22%), Positives = 164/405 (40%), Gaps = 63/405 (15%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           ++A++ F +MK F V P   +   LL      GK   V++  ++M+     P   +VF  
Sbjct: 42  EEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKP---TVFTY 98

Query: 308 --LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             ++   CK G + AA  + + M    +  +   Y  +I+ F K    D  +   +++  
Sbjct: 99  NIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-- 156

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRG 423
           K++   P      +  +YN +I   C  G+  K   FFR+ MK+  L P  V+++ L+  
Sbjct: 157 KDMCCEP------DVITYNALINCFCKFGKLPKGLEFFRE-MKRNGLKPNVVSYSTLVDA 209

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             KEG    A +    M R G+  +   Y  LI++Y + G  +D                
Sbjct: 210 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSD---------------- 253

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
                              A R+   M++ GV+ N+     +++ L    +  E L  +D
Sbjct: 254 -------------------AFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLD 294

Query: 544 LMMQ---SGSVPNFDSLLSVLSEKGKTIAAVKLL-----DFCLGRDCIIDLASYEKVLDA 595
            M++     +V  F  L+  L +      A+        DF L  +  I    Y  ++D 
Sbjct: 295 EMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAI----YTAMIDG 350

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           L    +   A ++  ++ +KG V D  +   L+ G  ++GN  +A
Sbjct: 351 LCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEA 395



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 126/267 (47%), Gaps = 2/267 (0%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A++F+  + R GL  ++  T+  +I+   ++G L+ A  +  +M + GV+W+   +  
Sbjct: 217 QQAIKFYVDMRRVGLVPNEY-TYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTA 275

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE- 155
           LI+         E + + D M +L ++ +V ++  L   + +      A  YF ++ ++ 
Sbjct: 276 LIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDF 335

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G++     Y  M+ G     ++E A   FE M  +G+  D   Y ++++G  +   + EA
Sbjct: 336 GLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEA 395

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             L  +M E  ++  +++YT+++ G     +   A    +EM    + P+ V   ++L  
Sbjct: 396 LALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 455

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDN 302
             + G + E  ++   +++  +   DN
Sbjct: 456 HYELGCINEAVELQSYLMKHQLLTSDN 482


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 201/416 (48%), Gaps = 6/416 (1%)

Query: 47  ERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI 106
           E +  F HD  T   MI  L    +   A  +L  M ++  +  E++F  +   YG+  +
Sbjct: 41  EYSNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHM 100

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
             +++++F  M   G + + KSY ++F +++   +  +A  ++  M   G+  +  + NV
Sbjct: 101 PLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNV 160

Query: 167 MLWGFFL-SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
           ++      S  ++ A   F +M  RG   D  TY T+ING  +  K  EA++LF EM  K
Sbjct: 161 LIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTK 220

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
              P+V++Y+ ++ G       D+A+ +FD+MK   ++PN  TY++L+ GLC  G  +E 
Sbjct: 221 GCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEA 280

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            ++L  MV +   P +   +  L+   CK G L  A + L  M    +  +AG YG +I 
Sbjct: 281 MELLEMMVRKRHKP-NMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIIN 339

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRP-QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
            FC    +  A   LD++V  +I   P + T  +     N ++Q LC NG   ++   + 
Sbjct: 340 GFCNIRKFQEAATYLDEMVLGQI--SPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYI 397

Query: 405 QLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
            +  +G+ +D   F++L++   K+G+   A  I   M   G   D   +  ++  +
Sbjct: 398 GMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGF 453



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 191/446 (42%), Gaps = 34/446 (7%)

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           S G   D  T+  MI+      +   AE++   MKE+    T   + ++ +GY  V    
Sbjct: 43  SNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPL 102

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM---VEVQKVLREMVERYIPPKDNSVF 305
           DA+R+F +M  F  KP   +Y ++   L +  ++   +   K +REM  R      N V 
Sbjct: 103 DAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLN-VL 161

Query: 306 MKLLGVQCK-SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +K L   CK SG ++AA ++ + M +     ++  YG LI   CK          L K  
Sbjct: 162 IKAL---CKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCK----------LGKTF 208

Query: 365 EKEIILRPQSTLDMEAS--SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NNL 420
           E + + +   T     S  +Y+ ++  LC  G   +A   F + MKK  ++P  F  ++L
Sbjct: 209 EAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDK-MKKKAIEPNVFTYSSL 267

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G  K G    A E++++M R+    +   Y  LI    ++G+ A+A   LD M   G 
Sbjct: 268 MDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGL 327

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN-------LDLVAKILEALLMRG 533
            P + L+  ++       + Q A+  +  MV   +  N       + L   +++ L   G
Sbjct: 328 KPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNG 387

Query: 534 HVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
           ++  +      M   G       FDSL+    +KG    A ++ D  +   C+ D   + 
Sbjct: 388 NLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWS 447

Query: 591 KVLDALLAAGKTLNAY-SILFKIMEK 615
            V+       K   A+ SI+ ++M +
Sbjct: 448 AVVGGFWDRRKVREAFESIVVELMNE 473



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 173/409 (42%), Gaps = 18/409 (4%)

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S G      T+ VM+     + +   A      MK     +    + ++  GY R     
Sbjct: 43  SNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPL 102

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A ++F +M +   +PT  SY ++    V   +   A+  +  M+   V+ + V+   L+
Sbjct: 103 DAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLI 162

Query: 274 PGLC-DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
             LC ++G +    ++ REM +R   P D+  +  L+   CK G    A ++ K M    
Sbjct: 163 KALCKNSGTIDAAFEIFREMPKRGCDP-DSYTYGTLINGLCKLGKTFEAKELFKEMDTKG 221

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
                  Y  L+   C+A   D A+ L DK+ +K I        +    +Y+ ++  LC 
Sbjct: 222 CSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAI--------EPNVFTYSSLMDGLCK 273

Query: 393 NGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           NG + +A E+    + K+   + V ++ LI G  KEG    A E +  M  +G+  DA  
Sbjct: 274 NGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGL 333

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPAS-------SLFRSVMESLFEDGRVQTAS 504
           Y  +I  +    +  +A T LD M+    SP          L   V++ L  +G +  + 
Sbjct: 334 YGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSF 393

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           ++   M  +G+  +      +++    +G + +A    D M+  G VP+
Sbjct: 394 QLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPD 442



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 31/191 (16%)

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
           + ++ +   Y R   P DA      M + G  P    + SV   L E+ +++ A    K 
Sbjct: 86  EIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKY 145

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA 569
           M E GV++++  +  +++AL                  SG++   D+   +  E  K   
Sbjct: 146 MREMGVRQSVVSLNVLIKALCK---------------NSGTI---DAAFEIFREMPK--- 184

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
                     R C  D  +Y  +++ L   GKT  A  +  ++  KG      +   L+ 
Sbjct: 185 ----------RGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMH 234

Query: 630 GLNQEGNTKQA 640
           GL Q GN  +A
Sbjct: 235 GLCQAGNVDEA 245


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 220/488 (45%), Gaps = 15/488 (3%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L R G+L      L DM  +G   D      LI    K G   ++ ++ +I++  G    
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V +Y+ L     + G    A +  ++M    + P   TYN +L     S KL+ A+   +
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
               R    DV+TY  +I    +   + +A KL  EM++K  +P V++Y  +I G     
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           R D+A+R  + M S+  +PN +T+  +L  +C  G+ ++ +K L EM+ +   P   + F
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT-F 355

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             L+   C+ G +  A DVL+ M +      +  Y  L+   CK +  +RAI+ LD +V 
Sbjct: 356 NILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVS 415

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRG 423
           +            +  +YN ++  LC +G+   A     QL  KG   PV   +N +I G
Sbjct: 416 RGCY--------PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGC-SPVLITYNTVIDG 466

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
            SK G  D A +++  M  +G+  D   Y  L+    R+G+  +A      + E G  P 
Sbjct: 467 LSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPN 526

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
           +  + S+M  L +  +   A   +  MV +G K        ++E L   G  +EAL  ++
Sbjct: 527 AITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLN 586

Query: 544 LMMQSGSV 551
            +   G V
Sbjct: 587 ELCSRGVV 594



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/522 (23%), Positives = 231/522 (44%), Gaps = 55/522 (10%)

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           + G ++E  K  + M   G    + +  +L + + + G+   A R    +   G  P   
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           TYNV++ G+  + ++ +A++  + M    +S DVVTYNT++       K+ EA ++    
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
            ++   P VI+YT +I+          A+++ DEM+    KP+ VTY  L+ G+C  G++
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 283 VEVQKVLREMVERYIPPK--DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            E  + L  M      P    +++ ++ +   C +G    A   L  MIR         +
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSM---CSTGRWMDAEKFLAEMIRKGCSPSVVTF 355

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
            ILI   C+  +  RAI +L+K+        PQ      + SYNP++  LC + +  +A 
Sbjct: 356 NILINFLCRKGLIGRAIDVLEKM--------PQHGCTPNSLSYNPLLHALCKDKKMERAI 407

Query: 401 IFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
            +   ++ +G   D V +N L+    K+G  D A EI+  +G +G               
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGC-------------- 453

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
                                SP    + +V++ L + G+   A +++  M  KG+K ++
Sbjct: 454 ---------------------SPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDI 492

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
              + ++  L   G V+EA+     + + G  PN   ++S++  L +  +T+ A+  L +
Sbjct: 493 ITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAY 552

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
            + R C     SY  +++ L   G    A  +L ++  +G V
Sbjct: 553 MVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVV 594



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 168/353 (47%), Gaps = 7/353 (1%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  + + G+L+ A   L  MP  G Q +     +++ S    G   ++ K  
Sbjct: 281 DVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFL 340

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M + G   SV +++ L   + R+G    A     KM   G  P   +YN +L      
Sbjct: 341 AEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKD 400

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K+E AI + + M SRG   D+VTYNT++    +  K+D A ++  ++  K   P +I+Y
Sbjct: 401 KKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITY 460

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I G   V + DDA+++ DEMK   +KP+ +TY+ L+ GL   GK+ E      ++ E
Sbjct: 461 NTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEE 520

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMY 353
             + P   +    +LG+ CK+     A D L  M+ R   PTE   Y ILIE      + 
Sbjct: 521 MGVKPNAITYNSIMLGL-CKARQTVRAIDFLAYMVARGCKPTETS-YMILIEGLAYEGLA 578

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNP----MIQHLCHNGQTGKAEIF 402
             A++LL++L  + ++ +  +   +    +N      + HL  NG     EIF
Sbjct: 579 KEALELLNELCSRGVVKKSSAEQVVVKIPFNVFYFYFLLHLLFNGLGSHREIF 631



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 184/397 (46%), Gaps = 16/397 (4%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           ++  +  ++M      P+ +  T+L+ GLC  GK  +  +V+ E++E      D   +  
Sbjct: 127 EEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVM-EILEDSGAVPDVITYNV 185

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   CK+G + +A   L+ + R+S+  +   Y  ++   C +     A+++LD+ +++E
Sbjct: 186 LISGYCKTGEIGSA---LQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE 242

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
                      +  +Y  +I+  C     G+A     ++  KG   D V +N LI G  K
Sbjct: 243 CY--------PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           EG  D A   +  M   G   +   +  ++ S    G   DA+  L  MI  G SP+   
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F  ++  L   G +  A  V++ M + G   N      +L AL     +E A+  +D+M+
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
             G  P+   +++LL+ L + GK   AV++L+    + C   L +Y  V+D L   GKT 
Sbjct: 415 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTD 474

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +A  +L ++  KG   D  +   L+ GL++EG   +A
Sbjct: 475 DAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEA 511



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 179/398 (44%), Gaps = 10/398 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L   GKL  A  +L    ++    D   + +LIE+  K+  V +++K+ 
Sbjct: 211 DVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLL 270

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M+  G +  V +Y+ L   I + GR   A R+ N M S G +P   T+N++L     +
Sbjct: 271 DEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCST 330

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +   A +F  +M  +G S  VVT+N +IN   R   +  A  +  +M +    P  +SY
Sbjct: 331 GRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSY 390

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++      ++ + A+   D M S    P+ VTY  LL  LC  GK+    ++L ++  
Sbjct: 391 NPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGS 450

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           +   P   +    + G+  K G  + A  +L  M    +  +   Y  L+    +    D
Sbjct: 451 KGCSPVLITYNTVIDGLS-KVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVD 509

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            AI     L  +E+ ++P       A +YN ++  LC   QT +A  F   ++ +G    
Sbjct: 510 EAIAFFHDL--EEMGVKPN------AITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPT 561

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             ++  LI G + EG    A E++  +  RGV + + A
Sbjct: 562 ETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 599



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 163/365 (44%), Gaps = 16/365 (4%)

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
           G++ E  K L +MV R   P D      L+   CK+G    A  V++ +       +   
Sbjct: 124 GELEEGFKFLEDMVCRGDIP-DIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVIT 182

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y +LI  +CK      A++LLD++           ++  +  +YN +++ LC +G+  +A
Sbjct: 183 YNVLISGYCKTGEIGSALQLLDRM-----------SVSPDVVTYNTILRTLCDSGKLKEA 231

Query: 400 -EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
            E+  RQ+ ++   D + +  LI    KE     A +++  M  +G   D   Y  LI  
Sbjct: 232 MEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLING 291

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             ++G   +A   L+ M   G  P       ++ S+   GR   A + +  M+ KG   +
Sbjct: 292 ICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPS 351

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           +     ++  L  +G +  A+  ++ M Q G  PN   ++ LL  L +  K   A++ LD
Sbjct: 352 VVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLD 411

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             + R C  D+ +Y  +L AL   GK   A  IL ++  KG      + + +I GL++ G
Sbjct: 412 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVG 471

Query: 636 NTKQA 640
            T  A
Sbjct: 472 KTDDA 476



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 87/181 (48%)

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
           +R GE  +    L+ M+  G  P      S++  L + G+   A+RVM+ + + G   ++
Sbjct: 121 VRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLG 579
                ++      G +  AL  +D M  S  V  ++++L  L + GK   A+++LD  + 
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
           R+C  D+ +Y  +++A         A  +L ++ +KG   D  + + LI G+ +EG   +
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300

Query: 640 A 640
           A
Sbjct: 301 A 301


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 215/463 (46%), Gaps = 10/463 (2%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           N +  T+  +I    ++G +  A  +  +M   G Q       VL+ S  K   V  + K
Sbjct: 383 NPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFK 442

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +F  M+  G+   + +Y  L   + ++G    A   + KM S  I P    +  +L G  
Sbjct: 443 LFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLC 502

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
              K+  A  +F+ + +  +SLD++ YN MI+GY +     EA KL+ ++ EK I PT++
Sbjct: 503 EKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIV 562

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           ++ +++ G+    +   A R+ D +K   ++PNAVTYT L+   C+ G M  + ++L EM
Sbjct: 563 TFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEM 622

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
             + I P   +  + + G+ CK   L  +  +L+ M  + +  +   Y  +I+ FCKA  
Sbjct: 623 KAKAIGPTHITYTVVIKGL-CKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARD 681

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
             +A +L DK++     L P S       +YN +I   C  G    A+     L  + V 
Sbjct: 682 MRKAFQLYDKMLLHN--LEPTSV------TYNILINGFCVYGDLKDADNLLVSLQNRKVN 733

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           L+  A+  +I+ H  +G+ D A    + M  +G       Y  +I    ++    +AK  
Sbjct: 734 LNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYF 793

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
              M+ DG  P   LF  ++ +  + G + +   ++  M++ G
Sbjct: 794 FCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 143/678 (21%), Positives = 281/678 (41%), Gaps = 86/678 (12%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM---------P 83
            ++++ A+ F+  +     F H R + L +  +L R  +LN  R +L  M         P
Sbjct: 103 VEDADSAVDFYYLLSNEFGFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAP 162

Query: 84  K-------KGVQWDED--MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
                       WD    ++++L  +Y +  +V +++ +   MK L    S+++Y++L  
Sbjct: 163 SLCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLL- 221

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
             LR    M     +N++   G   + +T ++++ G     + + A+ FF+D + +    
Sbjct: 222 YNLRHSNIMW--DVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQP 279

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFA---------------------------------- 220
            VV++NT+++ Y +   +D A+  F                                   
Sbjct: 280 SVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLK 339

Query: 221 -EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
            +M+   +EP +++Y  + KG+  +   + A  I  +M      PN VTYT L+ G C  
Sbjct: 340 NDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQI 399

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
           G + E  K+ +EM+         S  + LLG  CKS  ++ A  +   M    +  +   
Sbjct: 400 GNVEEALKLYKEMISHGFQLSIISSTV-LLGSLCKSRQVDVAFKLFCEMEANGLRPDLIT 458

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI   CK     +AI L +K+    II  P S +      +  ++  LC  G+  +A
Sbjct: 459 YSTLIHGLCKQGEVQQAILLYEKMCSNRII--PNSLI------HGAILMGLCEKGKISQA 510

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
            ++F  L+   + LD + +N +I G+ K GN   A ++ K +G +G+      +  L+  
Sbjct: 511 RMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYG 570

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           +    + + A+  LD++   G  P +  + ++M    E+G +Q+   ++  M  K +   
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPT 630

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCL 578
                 +++ L  +  ++E+   ++ M   G  P+  S  +++              FC 
Sbjct: 631 HITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQA------------FCK 678

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT--DWKSSDKLIAGLNQEGN 636
            RD       Y+K+L         L   S+ + I+  G     D K +D L+  L     
Sbjct: 679 ARDMRKAFQLYDKML------LHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKV 732

Query: 637 TKQADILSRMIRGEMSRG 654
                  + +I+   ++G
Sbjct: 733 NLNKYAYTTIIKAHCAKG 750



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/554 (20%), Positives = 246/554 (44%), Gaps = 15/554 (2%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           ++G ++ A+     M K G+  D   + +LI      G + E++ + + M+  G+E  + 
Sbjct: 293 KLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMV 352

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L K     G    A     KML +G  P   TY V++ G      +E A++ +++M
Sbjct: 353 TYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEM 412

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            S G  L +++   ++    + +++D A KLF EM+   + P +I+Y+T+I G       
Sbjct: 413 ISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEV 472

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
             A+ ++++M S  + PN++ + A+L GLC+ GK+ + +     ++   +   D  ++  
Sbjct: 473 QQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNL-SLDIILYNI 531

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++    K G+   A  + K +    I      +  L+  FC      +A +LLD +    
Sbjct: 532 MIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTI---- 587

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHS 425
                   L+  A +Y  ++   C  G          + MK   + P  + +  +I+G  
Sbjct: 588 ----KLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSE-MKAKAIGPTHITYTVVIKGLC 642

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K+     + ++++ M   G+  D  +Y  +I+++ +  +   A    D M+     P S 
Sbjct: 643 KQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSV 702

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            +  ++      G ++ A  ++ S+  + V  N      I++A   +G V++A+     M
Sbjct: 703 TYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQM 762

Query: 546 MQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           ++ G   S+ ++ +++  L ++     A       L      D   +E +L+A    G  
Sbjct: 763 VEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHL 822

Query: 603 LNAYSILFKIMEKG 616
            + + +L ++++ G
Sbjct: 823 NSEFELLAEMIKSG 836


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 221/459 (48%), Gaps = 15/459 (3%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+  +  + + L       G+   +     K+L  G +P   T N ++ G  L  +++ +
Sbjct: 40  GIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKS 99

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           + F + + ++G  +D V+Y T++NG  +  +   A KL   +++++  P V+ Y T+I G
Sbjct: 100 LHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDG 159

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +  ++A  ++ EM +  + P+A+TYT L+ G C  G+++    +L EM+ + I P 
Sbjct: 160 LCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINP- 218

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
              ++  L+   CK G++  A ++L  M +  I      Y  L++ +C       A ++ 
Sbjct: 219 GVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIF 278

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
             +V        Q  ++    SYN MI  LC   +  +A    R+++ K ++ D V +N+
Sbjct: 279 HAMV--------QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNS 330

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL-DSMIED 478
           LI G  K G   SA  ++  M  RG P D   Y  L+++ L K +  D  TAL   M E 
Sbjct: 331 LIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA-LCKNQNLDKATALFMKMKER 389

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P    + ++++ L + GR++ A  + + ++ KG   ++     ++  L   G  +EA
Sbjct: 390 GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEA 449

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           L     M  +G +PN   F+ ++  L EK +   A KLL
Sbjct: 450 LAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLL 488



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 188/396 (47%), Gaps = 10/396 (2%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +G Q D   +  L+    K G  + +VK+  +++      +V  Y+ +   + +      
Sbjct: 109 QGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE 168

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   +++M + GI P   TY  +++GF L  +L  A    ++M  + I+  V  YN +IN
Sbjct: 169 AYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILIN 228

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              +   + EA+ L A M ++ I+P V++Y+T++ GY  V    +A +IF  M    V P
Sbjct: 229 ALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNP 288

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N  +Y  ++ GLC   ++ E   +LREM+ + + P D   +  L+   CKSG + +A ++
Sbjct: 289 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP-DTVTYNSLIDGLCKSGRITSALNL 347

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           +  M     P +   Y  L++  CK +  D+A  L  K+ E+ I    Q T+     +Y 
Sbjct: 348 MNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI----QPTM----YTYT 399

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I  LC  G+   A+  F+ L+ KG  +D   +  +I G  KEG  D A  I   M   
Sbjct: 400 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 459

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           G   +A  +  +I S   K E   A+  L  MI  G
Sbjct: 460 GCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 188/390 (48%), Gaps = 14/390 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L   K    A   +  ++  G+F  D  T+  +I     +G+L  A  +L +M
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIF-PDAITYTTLIYGFCLLGQLMGAFSLLDEM 211

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K +     ++ +LI +  K+G V+E+  +  +M + G++  V +Y  L       G  
Sbjct: 212 ILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEV 271

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             AK+ F+ M+  G+ P  ++YN+M+ G     +++ A+    +M  + +  D VTYN++
Sbjct: 272 QNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 331

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +  ++  A  L  EM  +     V++YT+++      +  D A  +F +MK   +
Sbjct: 332 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P   TYTAL+ GLC  G++   Q++ + ++ +     D   +  ++   CK G  + A 
Sbjct: 392 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI-DVWTYTVMISGLCKEGMFDEAL 450

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   M        A  + I+I +  + +  D+A KLL +++ K +++     LD + + 
Sbjct: 451 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLV-----LDFKVA- 504

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            +  +Q+     +  KAE    +++ KG+L
Sbjct: 505 -DVFVQN-----ENDKAEKLLHEMIAKGLL 528



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 193/466 (41%), Gaps = 48/466 (10%)

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           TAI   + M+ +GI  + VT N +IN +    +M  +  +  ++ +   +P  I+  T++
Sbjct: 28  TAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLM 87

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           KG         +L   D++ +   + + V+Y  LL GLC  G+     K+LR + +R   
Sbjct: 88  KGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTR 147

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P   +V M                                 Y  +I+  CK ++ + A  
Sbjct: 148 P---NVVM---------------------------------YNTIIDGLCKDKLVNEAYD 171

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AF 417
           L  ++  + I   P      +A +Y  +I   C  GQ   A     +++ K +   V  +
Sbjct: 172 LYSEMDARGIF--P------DAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIY 223

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI    KEGN   A  ++ +M + G+      Y  L++ Y   GE  +AK    +M++
Sbjct: 224 NILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQ 283

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G +P    +  ++  L +  RV  A  +++ M+ K +  +      +++ L   G +  
Sbjct: 284 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 343

Query: 538 ALGRIDLMMQSGS---VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           AL  ++ M   G    V  + SLL  L +      A  L      R     + +Y  ++D
Sbjct: 344 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 403

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            L   G+  NA  +   ++ KG   D  +   +I+GL +EG   +A
Sbjct: 404 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEA 449



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/416 (22%), Positives = 180/416 (43%), Gaps = 13/416 (3%)

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P +I +  ++     +++   A+ +  +M+   ++ N VT   L+   C  G+M     V
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L ++++    P D      L+   C  G +  +      ++      +   YG L+   C
Sbjct: 68  LGKILKLGYQP-DTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A+KLL  + ++    RP   +      YN +I  LC +    +A   + ++  
Sbjct: 127 KIGETRCAVKLLRMIEDRST--RPNVVM------YNTIIDGLCKDKLVNEAYDLYSEMDA 178

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +G+  D + +  LI G    G    AF ++  M  + +      Y  LI +  ++G   +
Sbjct: 179 RGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKE 238

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           AK  L  M ++G  P    + ++M+     G VQ A ++  +MV+ GV  N+     ++ 
Sbjct: 239 AKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMIN 298

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
            L     V+EA+  +  M+    VP+   ++SL+  L + G+  +A+ L++    R    
Sbjct: 299 GLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPA 358

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D+ +Y  +LDAL        A ++  K+ E+G      +   LI GL + G  K A
Sbjct: 359 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 414


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 147/627 (23%), Positives = 281/627 (44%), Gaps = 16/627 (2%)

Query: 19  PQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           P    + V  VL    +++ +  +F+ V       H  ET   M+E L   GK+     +
Sbjct: 83  PDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYV 142

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
              M K+ ++ D + +  + +    KG ++++      M++ G   +  SY+ L  L+L+
Sbjct: 143 FDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLK 202

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
                 A   + +M+ +G  P+  TY+ ++ G      +E+ +   ++M++ G+  +V T
Sbjct: 203 SRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYT 262

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           +   I    R  K++EA ++   M ++   P V++YT +I       + D A  +F +MK
Sbjct: 263 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMK 322

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGH 317
           +   KP+ VTY  LL    D   +  V +   EM  + ++P  D   F  L+   CK+G+
Sbjct: 323 TGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVP--DVVTFTILVDALCKAGN 380

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
              A   L  M    I      Y  LI    +    D A+++ D +  + + ++P     
Sbjct: 381 FGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNM--ESLGVKPT---- 434

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
             A +Y   I +   +G +  A   F ++  KG+  + VA N  +   +K G    A +I
Sbjct: 435 --AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 492

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              +   G+  D+  Y  +++ Y + GE  +A   L  M+E+   P   +  S++ +L++
Sbjct: 493 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYK 552

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
             RV  A ++   M E  +K  +     +L  L   G ++EA+   + M+Q G  PN   
Sbjct: 553 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 612

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           F++L   L +  +   A+K+L   +   C+ D+ +Y  ++  L+  G+   A    F  M
Sbjct: 613 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC-FFHQM 671

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +K    D+ +   L+ G+ + G  + A
Sbjct: 672 KKLVYPDFVTLCTLLPGVVKAGLIEDA 698



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 164/690 (23%), Positives = 281/690 (40%), Gaps = 77/690 (11%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + ++ + L  A+  + A + F  + + G    DR T++ +++       L+       +M
Sbjct: 298 YTVLIDALCTARKLDCAKEVFAKM-KTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEM 356

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K G   D   F +L+++  K G   E+    D+M+  G+  ++ +Y+ L   +LR  R 
Sbjct: 357 EKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRL 416

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL-------- 194
             A   F+ M S G++PT +TY V +  +  S    +A+  FE MK++GI+         
Sbjct: 417 DDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 476

Query: 195 ---------------------------DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
                                      D VTYN M+  Y++  ++DEA KL +EM E   
Sbjct: 477 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCC 536

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
           EP VI   ++I      +R D+A ++F  MK   +KP  VTY  LL GL   GK+ E  +
Sbjct: 537 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 596

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +   MV++  PP +   F  L    CK+  +  A  +L  M+ +    +   Y  +I   
Sbjct: 597 LFEGMVQKGCPP-NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 655

Query: 348 CKAEMYDRAIKL---LDKLVEKEII----LRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
            K      A+     + KLV  + +    L P             +I +  ++     A 
Sbjct: 656 VKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPAN 715

Query: 401 IFFRQLM-----KKGVLDPVAFNN-----------------LIRGHSKEGNPDSA---FE 435
           +F+  LM     + G+ + V+F+                  +IR   K  N   A   FE
Sbjct: 716 LFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFE 775

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
             K     GV      Y  LI   L       A+     +   G  P  + +  ++++  
Sbjct: 776 --KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYG 833

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG-RIDLMMQ---SGSV 551
           + G++     + K M     + N      ++  L+  G+V++AL    DLM     S + 
Sbjct: 834 KSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 893

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             +  L+  LS+ G+   A +L +      C  + A Y  +++    AG+  +A   LFK
Sbjct: 894 CTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEA-DAACALFK 952

Query: 612 IMEKGGV-TDWKSSDKLIAGLNQEGNTKQA 640
            M K GV  D K+   L+  L   G   + 
Sbjct: 953 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 982



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 150/630 (23%), Positives = 271/630 (43%), Gaps = 51/630 (8%)

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            L + G+   A+ I   +   G+  D   + ++++ Y K G + E++K+   M +   E  
Sbjct: 480  LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPD 539

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
            V   ++L   + +  R   A + F +M    ++PT  TYN +L G   + K++ AI  FE
Sbjct: 540  VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 599

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
             M  +G   + +T+NT+ +   +  ++  A K+  +M +    P V +Y T+I G V   
Sbjct: 600  GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 659

Query: 246  RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
            +  +A+  F +MK   V P+ VT   LLPG+  AG + +  K++   +        N  +
Sbjct: 660  QVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFW 718

Query: 306  MKLLG-VQCKSGHLNAAA---------------DVLKAMIRLSIP-TEAGHYGILIENFC 348
              L+G +  ++G  NA +                +L  +IR S     A    +L E F 
Sbjct: 719  EDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFT 778

Query: 349  KAEMYDRAIK--------LLDKLVEKEIILRPQSTLDM--------EASSYNPMIQHLCH 392
            K    D  ++        L+  L+E ++I   Q             + ++YN ++     
Sbjct: 779  K----DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAY-- 832

Query: 393  NGQTGKAEIFFR--QLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIV-KIMGRRGVPR 447
             G++GK +  F   + M     +P  +  N +I G  K GN D A ++   +M  R    
Sbjct: 833  -GKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 891

Query: 448  DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
             A  Y  LI+   + G   +AK   + M + G  P  +++  ++    + G    A  + 
Sbjct: 892  TACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALF 951

Query: 508  KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGK- 566
            K MV++GV+ +L   + +++ L M G V+E L     + +SG  P+      +++  GK 
Sbjct: 952  KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKF 1011

Query: 567  ---TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
                 A V   +    R    DL +Y  ++  L  AG    A  I  +I   G   +  +
Sbjct: 1012 HRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1071

Query: 624  SDKLIAGLNQEGNTKQA-DILSRMIRGEMS 652
             + LI G +  G  + A  +   M+ G  S
Sbjct: 1072 FNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1101



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/467 (23%), Positives = 199/467 (42%), Gaps = 72/467 (15%)

Query: 55   DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
            D  T+  +I  L + G++  A C    M KK V  D      L+    K G+++++ KI 
Sbjct: 644  DVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKII 702

Query: 115  ---------------------DIMKQLGVERSVKSYDALF-KLILRRG--------RYMM 144
                                  I+ + G++ +V   + L    I R G        RY  
Sbjct: 703  ANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSF 762

Query: 145  -------AKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
                   A+  F K   + G++P   TYN+++ G   +  +E A   F  +K+ G   DV
Sbjct: 763  KHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDV 822

Query: 197  VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF-D 255
             TYN +++ Y +  K+DE  +++ EM     EP  I++  +I G V     DDAL ++ D
Sbjct: 823  ATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYD 882

Query: 256  EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
             M   D  P A TY  L+ GL  +G++ E +++   M +    P + +++  L+    K+
Sbjct: 883  LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRP-NCAIYNILINGFGKA 941

Query: 316  GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL------------ 363
            G  +AA  + K M++  +  +   Y +L++  C     D  +    +L            
Sbjct: 942  GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCY 1001

Query: 364  ------------VEKEIIL----RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
                        +E+ ++L    +    +  +  +YN +I +L   G   +A   + ++ 
Sbjct: 1002 NLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1061

Query: 408  KKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            + G L+P    FN LIRG+S  G P+ A+ + + M   G   +   Y
Sbjct: 1062 RAG-LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1107



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            HN+V + L  A N + AL  +  +     F+    T+  +I+ L + G+L  A+ +   M
Sbjct: 860  HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 919

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G + +  ++ +LI  +GK G    +  +F  M + GV   +K+Y  L   +   GR 
Sbjct: 920  SDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 979

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK-SRGISLDVVTYNT 201
                 YF ++   G+ P    YN+++ G     +LE A+  F +MK SRGI+ D+ TYN+
Sbjct: 980  DEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNS 1039

Query: 202  MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            +I        ++EA K++ E++   +EP V ++  +I+GY    + + A  ++  M +  
Sbjct: 1040 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1099

Query: 262  VKPNAVTYTAL 272
              PN  TY  L
Sbjct: 1100 FSPNTGTYEQL 1110



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 4/320 (1%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +NL+   L  A   E A   F  V+  G    D  T+  +++  G+ GK++    I  +M
Sbjct: 790  YNLLIGGLLEADMIEIAQDVFLQVKNTGCI-PDVATYNFLLDAYGKSGKIDELFEIYKEM 848

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGR 141
                 + +     ++I    K G V +++ ++ D+M       +  +Y  L   + + GR
Sbjct: 849  SAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 908

Query: 142  YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
               AK+ F  M   G  P    YN+++ GF  + + + A   F+ M   G+  D+ TY+ 
Sbjct: 909  LYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 968

Query: 202  MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM-KSF 260
            +++      ++DE    F E+KE  + P V+ Y  +I G     R ++AL +F+EM KS 
Sbjct: 969  LVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSR 1028

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             + P+  TY +L+  L  AG + E  K+  E+    + P +   F  L+     SG    
Sbjct: 1029 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP-NVFTFNALIRGYSLSGKPEH 1087

Query: 321  AADVLKAMIRLSIPTEAGHY 340
            A  V + M+        G Y
Sbjct: 1088 AYAVYQTMVTGGFSPNTGTY 1107



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 94/183 (51%), Gaps = 2/183 (1%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N++ N    A  ++ A   F+ + + G+   D +T+  +++ L  VG+++       ++
Sbjct: 931  YNILINGFGKAGEADAACALFKRMVKEGV-RPDLKTYSVLVDCLCMVGRVDEGLHYFREL 989

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGR 141
             + G+  D   + ++I   GK   ++E++ +F+ MK+  G+   + +Y++L   +   G 
Sbjct: 990  KESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGM 1049

Query: 142  YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
               A + +N++   G+EP   T+N ++ G+ LS K E A   ++ M + G S +  TY  
Sbjct: 1050 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1109

Query: 202  MIN 204
            + N
Sbjct: 1110 LPN 1112


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 256/546 (46%), Gaps = 14/546 (2%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           +++D M+Q G   S      + + ++   ++      F +M+  G  P +  Y   +   
Sbjct: 17  ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
                L+ A+  FE MK R +  +V  YN +I G  + K++ +AEKLF EM  +N+ P  
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           +++ T+I GY      D A+ + + MK   V+P+ +T+ +LL GLC A ++ E + +L E
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           +      P   +  +   G+        AA D+ +  I   +  +     IL+   CK  
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             ++A ++L  LVE  ++  P   +      YN ++   C  G   +A +   Q+  +G+
Sbjct: 257 KVEKAEEVLKSLVEHGLV--PGEVI------YNTIVNGYCQIGDMDRAILTIEQMESRGL 308

Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             + +AFN++I    +    D A E VK M  +G+    + Y  LI+ Y R    +    
Sbjct: 309 RPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQ 368

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L+ M E+G  P    + S++  L +DG++  A  V++ MV +GV  N ++   +++   
Sbjct: 369 ILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSC 428

Query: 531 MRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G + EAL   D M ++G   ++  ++SL+  L + GK   A ++           D+ 
Sbjct: 429 TVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVI 488

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS-DKLIAGLNQEGNTKQADILSRM 646
           +Y  ++     AG +      L++ M+K G+    ++   LI+G ++EG   +  + + M
Sbjct: 489 TYNSLISGYSNAGNSQKCLE-LYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEM 547

Query: 647 IRGEMS 652
           ++  +S
Sbjct: 548 LQMNLS 553



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 231/511 (45%), Gaps = 15/511 (2%)

Query: 13  KIRALVPQ-FDHNLVYN-VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           K    VP  F ++++++ +L     +  AL  +R     G+   D  T   ++  L + G
Sbjct: 198 KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGV-KIDNYTCSILLNGLCKEG 256

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           K+  A  +L  + + G+   E ++  ++  Y + G +  ++   + M+  G+  +  +++
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFN 316

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
           ++            A+ +  KM+ +GI P+  TYN+++ G+          +  E+M+  
Sbjct: 317 SVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEEN 376

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G   +V++Y ++IN   +  K+ EAE +  +M  + + P    Y  +I G   V +  +A
Sbjct: 377 GEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREA 436

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           LR FDEM    +    VTY +L+ GLC  GK+ E +++   +      P D   +  L+ 
Sbjct: 437 LRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCP-DVITYNSLIS 495

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
               +G+     ++ + M +L +      +  LI   C  E     IKL + L  + +  
Sbjct: 496 GYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKE----GIKLKETLFNEML-- 548

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
             Q  L  +   YN MI      G   KA    ++++  GV  D   +N+LI GH KEG 
Sbjct: 549 --QMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGK 606

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
                ++V  M  +G+  +AD Y  LI+ +    +   A      M+E+G  P   +   
Sbjct: 607 LSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNE 666

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           +   L +DGR+Q A  +   M+  G+ +NLD
Sbjct: 667 LSTGLRKDGRLQEAQSICSEMIANGM-DNLD 696



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 225/486 (46%), Gaps = 16/486 (3%)

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           +++ES  +       + +F  M  LG       Y       ++ G   +A   F  M   
Sbjct: 36  MIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRR 95

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            + P    YNV++ G     ++  A + F +M  R +  + VT+NT+I+GY +  ++D A
Sbjct: 96  KVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVA 155

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             L   MK++ +EP++I++ +++ G     R ++A  + +E+K     P+  TY+ +  G
Sbjct: 156 IGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDG 215

Query: 276 L--CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
           L   D G    +  + RE + + +   DN     LL   CK G +  A +VLK+++   +
Sbjct: 216 LLKSDDGAGAALD-LYREAIGKGVKI-DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGL 273

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  ++  +C+    DRAI  ++++  +   LRP         ++N +I   C  
Sbjct: 274 VPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG--LRPNCI------AFNSVIDKFCEM 325

Query: 394 GQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
               KAE + ++++ KG+   V  +N LI G+ +       F+I++ M   G   +  +Y
Sbjct: 326 QMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISY 385

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI    + G+  +A+  L  M+  G  P ++++  +++     G+++ A R    M +
Sbjct: 386 GSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSK 445

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G+   +     +++ L   G ++EA     L+  +G  P+   ++SL+S  S  G +  
Sbjct: 446 NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQK 505

Query: 570 AVKLLD 575
            ++L +
Sbjct: 506 CLELYE 511



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 138/620 (22%), Positives = 273/620 (44%), Gaps = 76/620 (12%)

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           K G ++ ++++F+ MK+  V  +V  Y+ L   + +  R   A++ F +M    + P R 
Sbjct: 78  KLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRV 137

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           T+N ++ G+  + +++ AI   E MK   +   ++T+N++++G  + ++++EA  +  E+
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI 197

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADD----ALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           K     P   +Y+ +  G +   ++DD    AL ++ E     VK +  T + LL GLC 
Sbjct: 198 KCNGFVPDGFTYSIIFDGLL---KSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCK 254

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            GK+ + ++VL+ +VE  + P +  ++  ++   C+ G ++ A   ++ M    +     
Sbjct: 255 EGKVEKAEEVLKSLVEHGLVPGE-VIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCI 313

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEK---------EIILRPQSTL-----------DM 378
            +  +I+ FC+ +M D+A + + K+V K          I++     L           +M
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEM 373

Query: 379 EAS-------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA--FNNLIRGHSKEGN 429
           E +       SY  +I  LC +G+  +AE+  R ++ +GVL P A  +N LI G    G 
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVL-PNANIYNMLIDGSCTVGK 432

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
              A      M + G+      Y  LI+   + G+  +A+     +   GH P    + S
Sbjct: 433 LREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNS 492

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL----------------EALLMR- 532
           ++      G  Q    + ++M + G+K  ++    ++                E L M  
Sbjct: 493 LISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNL 552

Query: 533 -----------------GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
                            GHV++A      M+  G  P+   ++SL+    ++GK      
Sbjct: 553 SPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKD 612

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           L+D    +  I +  +Y  ++           AY    +++E G + +    ++L  GL 
Sbjct: 613 LVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLR 672

Query: 633 QEGNTKQA-DILSRMIRGEM 651
           ++G  ++A  I S MI   M
Sbjct: 673 KDGRLQEAQSICSEMIANGM 692



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 124/612 (20%), Positives = 259/612 (42%), Gaps = 84/612 (13%)

Query: 18  VPQFDH-NLVYNVLHGAKNSEHALQFFRWVERAGL-FNHDRETHLKMIEILGRVGKLNHA 75
           +P F +  ++   L  +K  ++ L  F+  E  GL F  D+  + + +    ++G L  A
Sbjct: 28  LPSFGYVRMIVESLVESKKFDNVLDLFK--EMVGLGFRPDKLVYGRAMLAAVKLGDLKLA 85

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             +   M ++ V  +  ++ VLI    K+  ++++ K+F  M    +  +  +++ L   
Sbjct: 86  MELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDG 145

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE----------------- 178
             + G   +A     +M  E +EP+  T+N +L G   + ++E                 
Sbjct: 146 YCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPD 205

Query: 179 -------------------TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
                               A+  + +   +G+ +D  T + ++NG  +  K+++AE++ 
Sbjct: 206 GFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVL 265

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
             + E  + P  + Y T++ GY  +   D A+   ++M+S  ++PN + + +++   C+ 
Sbjct: 266 KSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEM 325

Query: 280 GKMVEVQKVLREMVERYIPP---------------------------------KDNSV-F 305
             + + ++ +++MV + I P                                 K N + +
Sbjct: 326 QMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISY 385

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             L+   CK G +  A  VL+ M+   +   A  Y +LI+  C       A++  D++  
Sbjct: 386 GSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM-- 443

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGH 424
                  ++ +     +YN +I+ LC  G+  +AE  F  +   G   D + +N+LI G+
Sbjct: 444 ------SKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
           S  GN     E+ + M + G+    + +  LI    ++G     +T  + M++   SP  
Sbjct: 498 SNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKL-KETLFNEMLQMNLSPDR 556

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
            ++ +++    E G VQ A  + K MV+ GV+ +      ++   L  G + E    +D 
Sbjct: 557 VVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDD 616

Query: 545 MMQSGSVPNFDS 556
           M   G +P  D+
Sbjct: 617 MKAKGLIPEADT 628


>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
 gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
          Length = 600

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 201/418 (48%), Gaps = 10/418 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++ +L +  + + A  +   M  +G+  D      L+ +  +  +   + ++FD M + G
Sbjct: 120 LVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAG 179

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  S   Y+A+  + L+ G    A+    +M + G+   R +YN ++  +        A+
Sbjct: 180 LAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAM 239

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              + M   GI  D VT+N++I+G  ++ ++ EA +LF EM      P  ++YTT+I GY
Sbjct: 240 CVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGY 299

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 ++A+++  EM++  + P   TY A+L  LC+ GKM EV ++L EM ER +   D
Sbjct: 300 CRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKV-QAD 358

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +     L+   CK GH+ +A  V K M+   +      Y  LI  FCKA+  D A +   
Sbjct: 359 HVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFF 418

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           ++V+        +      S ++ ++   C         +   +LMK+G+  D   + +L
Sbjct: 419 QMVD--------AGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSL 470

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           IR   ++G  D A ++   M  +G+  D+  Y  L  +YL +G+P  A   LD M ++
Sbjct: 471 IRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKN 528



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 7/362 (1%)

Query: 11  QNKIRALVPQFDH-NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL--KMIEILG 67
           Q + R L P       +   L  A+ +  A + F  + RAGL      TH+   M+ +  
Sbjct: 139 QMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAV---STHVYNAMLHVCL 195

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + G    A  ++  M   GV  D   +  +I  Y KKG+  E++ + D M + G+     
Sbjct: 196 KAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTV 255

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           ++++L   + + GR   A + F +M +    P   TY  ++ G+  +  +E A++   +M
Sbjct: 256 TWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEM 315

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           ++ G+   V TYN ++       KM E  +L  EM E+ ++   ++  T+I  Y      
Sbjct: 316 EATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHM 375

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
             A ++  +M    ++ N  TY AL+ G C A ++ E ++   +MV+    P + SVF  
Sbjct: 376 TSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSP-NYSVFSW 434

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   CK  + +A   +   +++  +P +   Y  LI   C+  + D+A K+ D++  K 
Sbjct: 435 LVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKG 494

Query: 368 II 369
           ++
Sbjct: 495 LV 496



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 173/406 (42%), Gaps = 12/406 (2%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A R F++M + G+ P  H    +L     +    TA R F++M   G+++    YN M++
Sbjct: 133 ALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLH 192

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              +      AE L   M    +     SY T+I  Y       +A+ + D M    ++ 
Sbjct: 193 VCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRA 252

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + VT+ +L+ GLC  G++ E  ++  EM      P DN  +  L+   C++G++  A  +
Sbjct: 253 DTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATP-DNVTYTTLIDGYCRAGNIEEAVKL 311

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              M    +      Y  ++   C+        +LL+++ E+++          +  + N
Sbjct: 312 RGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKV--------QADHVTCN 363

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I   C  G    A    +++M+ G+ L+   +  LI G  K    D A E    M   
Sbjct: 364 TLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDA 423

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTAL-DSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           G   +   +  L++ + +K   ADA   + D +++ G  P  +++RS++  L   G V  
Sbjct: 424 GFSPNYSVFSWLVDGFCKKNN-ADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQ 482

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           A +V   M  KG+  +  + A +    L  G    A   +D M ++
Sbjct: 483 AQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKN 528



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 157/340 (46%), Gaps = 10/340 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I  L + G++  A  +  +M       D   +  LI+ Y + G ++E+VK+ 
Sbjct: 253 DTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLR 312

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  G+   V +Y+A+ + +   G+     +  N+M    ++    T N ++  +   
Sbjct: 313 GEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKR 372

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             + +A +  + M   G+ L+  TY  +I+G+ + K++DEA++ F +M +    P    +
Sbjct: 373 GHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVF 432

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + ++ G+     AD  L I DE+    + P+   Y +L+  LC  G + + QKV  +M  
Sbjct: 433 SWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQS 492

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE--- 351
           + +   D+ V+  L       G   AA++ L  M +  +      Y  L  ++   +   
Sbjct: 493 KGL-VGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIYNCLCTSYADEKETL 551

Query: 352 --MYDRAIK--LLDKLVEKEI-ILRPQST-LDMEASSYNP 385
             ++ RAI+  L+ K V K +   R +ST L +E   Y+P
Sbjct: 552 NILWVRAIERGLIKKSVYKLMHQARLESTNLAVETGGYDP 591



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 131/323 (40%), Gaps = 47/323 (14%)

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
           +P V S+  ++    A  R  DALR+FD+M++  + P+A   TALL  L  A      ++
Sbjct: 113 DPRVPSWLVLVLAQSA--RPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARR 170

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           V  EM    +    + V+  +L V  K+G    A  ++  M    +P             
Sbjct: 171 VFDEMARAGLAVSTH-VYNAMLHVCLKAGDAARAEALVTRMDAAGVP------------- 216

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
                       LD+                   SYN +I   C  G   +A     ++ 
Sbjct: 217 ------------LDRF------------------SYNTVIALYCKKGMRYEAMCVRDRMD 246

Query: 408 KKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
           K+G+  D V +N+LI G  K G    A ++   M       D   Y  LI+ Y R G   
Sbjct: 247 KEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIE 306

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A      M   G  P  + + +++  L EDG+++  ++++  M E+ V+ +      ++
Sbjct: 307 EAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLI 366

Query: 527 EALLMRGHVEEALGRIDLMMQSG 549
            A   RGH+  A      MM+SG
Sbjct: 367 NAYCKRGHMTSACKVKKKMMESG 389



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 4/245 (1%)

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
           L  +A +   ++  L     T  A   F ++ + G+ +    +N ++    K G+   A 
Sbjct: 145 LAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAE 204

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +V  M   GVP D  +Y  +I  Y +KG   +A    D M ++G    +  + S++  L
Sbjct: 205 ALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGL 264

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP-- 552
            + GRV+ A+++   M       +      +++     G++EEA+     M  +G +P  
Sbjct: 265 CKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGV 324

Query: 553 -NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++++L  L E GK     +LL+    R    D  +   +++A    G   +A  +  K
Sbjct: 325 ATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKK 384

Query: 612 IMEKG 616
           +ME G
Sbjct: 385 MMESG 389



 Score = 45.4 bits (106), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 46/234 (19%), Positives = 93/234 (39%), Gaps = 3/234 (1%)

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           DP   + L+   ++   P  A  +   M  RG+  DA A   L+ +  R    A A+   
Sbjct: 113 DPRVPSWLVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVF 172

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D M   G + ++ ++ +++    + G    A  ++  M   GV  +      ++     +
Sbjct: 173 DEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKK 232

Query: 533 GHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G   EA+   D M + G       ++SL+  L + G+   A +L           D  +Y
Sbjct: 233 GMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTY 292

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
             ++D    AG    A  +  ++   G +    + + ++  L ++G  K+ + L
Sbjct: 293 TTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQL 346


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 189/369 (51%), Gaps = 10/369 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M ++ ++     + ++I+S  K G + +++ +F+ M+  G++  V +Y ++   +   GR
Sbjct: 235 MEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGR 294

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +    +   +M+   I P   T++ ++  F    KL  A   + +M +RGI+ D +TY++
Sbjct: 295 WDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSS 354

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G+ +  ++ EA ++   M  K  EP +++Y+ +I  Y   +R D+ +R+F E+ S  
Sbjct: 355 LIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           +  + VTY  L+ G C +GK+   +++ +EMV R +PP   +  + L G+ C +G L  A
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGL-CDNGELQKA 473

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            ++ + M +  +    G Y I+I   C A   D A  L   L  K +  +P      +  
Sbjct: 474 LEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGV--KP------DVL 525

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN MI  LC  G   +A++ FR++ + G       +N LIR H       S+ E+++ M
Sbjct: 526 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEM 585

Query: 441 GRRGVPRDA 449
             RG   DA
Sbjct: 586 KMRGFAADA 594



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 131/561 (23%), Positives = 243/561 (43%), Gaps = 47/561 (8%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D + +++ +   K  +  L F + ++  G+  H+  T   MI    R  KL  
Sbjct: 64  RPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGI-EHNMYTMNIMINCFCRKRKLLF 122

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  ++    K G + +   F  LI  +  +G V E+V + D M ++    +V + + L  
Sbjct: 123 AFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLIN 182

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            +  +GR   A    ++M+  G E    TY  +L     S     A+  F  M+ R I  
Sbjct: 183 GLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKA 242

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            VV Y+ +I+   +   +D+A  LF EM+ K I+  V++Y+++I G     R DD  ++ 
Sbjct: 243 SVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKML 302

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM   ++ PN VT++AL+      GK++E +++  EMV R I P D   +  L+   CK
Sbjct: 303 REMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP-DTITYSSLIDGFCK 361

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              L  A  +L  M+          Y ILI ++CKA+  D  ++L  ++  K ++     
Sbjct: 362 ENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLV----- 416

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA------------------ 416
               +  +YN ++Q  C +G+   A+  F++++ +GV   V                   
Sbjct: 417 ---ADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKA 473

Query: 417 ------------------FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                             +N +I G       D A+ +   +  +GV  D   Y  +I  
Sbjct: 474 LEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGG 533

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             +KG  ++A      M EDG +P+   +  ++ +      V ++  +++ M  +G   +
Sbjct: 534 LCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAAD 593

Query: 519 LDLVAKILEALLMRGHVEEAL 539
              + K++  +L  G +++  
Sbjct: 594 ASTI-KMVVVMLSDGRLDKTF 613



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 127/546 (23%), Positives = 230/546 (42%), Gaps = 48/546 (8%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           V E++ +F+ M Q     S+  +  LF  + RR  Y +   +  +M   GIE   +T N+
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           M+  F    KL  A          G   + +T++T+ING+    ++ EA  L   M E  
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             P V++  T+I G     R  +AL + D M  +  + N +TY  +L  +C +G      
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            + R+M ER                                    SI      Y I+I++
Sbjct: 230 DLFRKMEER------------------------------------SIKASVVQYSIVIDS 253

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK    D A+ L +++  K I          +  +Y+ +I  LC++G+        R++
Sbjct: 254 LCKDGNLDDALSLFNEMEMKGI--------KADVVAYSSIIGGLCNDGRWDDGAKMLREM 305

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           + + ++ + V F+ LI    KEG    A E+   M  RG+  D   Y  LI+ + ++   
Sbjct: 306 IGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRL 365

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            +A   LD M+  G  P    +  ++ S  +  RV    R+   +  KG+  +      +
Sbjct: 366 GEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTL 425

Query: 526 LEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           ++     G +  A      M+  G   SV  +  LL  L + G+   A+++ +       
Sbjct: 426 VQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM 485

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADI 642
           I+ +  Y  ++  +  A K  +A+S+   +  KG   D  + + +I GL ++G+  +AD+
Sbjct: 486 ILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADM 545

Query: 643 LSRMIR 648
           L R ++
Sbjct: 546 LFRKMK 551



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 209/474 (44%), Gaps = 10/474 (2%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G++ +     ++I  + +K  +  +  +     + G E +  ++  L       G
Sbjct: 94  EMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEG 153

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A    ++M+     P   T N ++ G  L  ++  A+   + M   G   + +TY 
Sbjct: 154 RVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            ++N   +      A  LF +M+E++I+ +V+ Y+ +I         DDAL +F+EM+  
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            +K + V Y++++ GLC+ G+  +  K+LREM+ R I P +   F  L+ V  K G L  
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP-NVVTFSALIDVFVKEGKLLE 332

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A ++   M+   I  +   Y  LI+ FCK      A ++LD +V K     P        
Sbjct: 333 AKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGC--EPNIV----- 385

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y+ +I   C   +       F ++  KG V D V +N L++G  + G  + A E+ + 
Sbjct: 386 -TYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  RGVP     Y  L++     GE   A    + M +        ++  ++  +    +
Sbjct: 445 MVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK 504

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           V  A  +  S+  KGVK ++     ++  L  +G + EA      M + G  P+
Sbjct: 505 VDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPS 558



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 85/433 (19%), Positives = 186/433 (42%), Gaps = 18/433 (4%)

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           I    +SY   ++  +   + ++A+ +F+ M      P+ + ++ L   +    +   V 
Sbjct: 30  ISEAKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVL 89

Query: 287 KVLREMVERYIPPKDNSVFMKLL-GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
              +EM    I  + N   M ++    C+   L  A  V+   ++         +  LI 
Sbjct: 90  GFCKEMDLNGI--EHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLIN 147

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
            FC       A+ L+D++VE +   RP         + N +I  LC  G+  +A +   +
Sbjct: 148 GFCLEGRVSEAVALVDRMVEMK--YRPNVV------TVNTLINGLCLKGRVTEALVLIDR 199

Query: 406 LMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           ++K G   + + +  ++    K GN   A ++ + M  R +      Y  +I+S  + G 
Sbjct: 200 MVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGN 259

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             DA +  + M   G       + S++  L  DGR    +++++ M+ + +  N+   + 
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           +++  +  G + EA    + M+  G  P+   + SL+    ++ +   A ++LD  + + 
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           C  ++ +Y  ++++   A +  N   +  +I  KG V D  + + L+ G  Q G   + +
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSG---KLN 436

Query: 642 ILSRMIRGEMSRG 654
           +   + +  +SRG
Sbjct: 437 VAKELFQEMVSRG 449


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 225/485 (46%), Gaps = 13/485 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  ++ S  K    Q ++ +   M+  G+   + +++ L     + G    +   F  +L
Sbjct: 59  FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANIL 118

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G EP   T   ++ G  L  ++  A+ F + + + G  L+ V Y T+ING  +  +  
Sbjct: 119 KKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTS 178

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A +L   +  K ++P V+ Y T+I     V+  ++A  ++ EM S  + P+ VTY+AL+
Sbjct: 179 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALI 238

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  GK+ +   +  +M+   I P D   F  L+   CK G +  A +VL  M++  I
Sbjct: 239 SGFCILGKLNDAIGLFNKMISEEINP-DVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI 297

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y  L++ +C  +  ++A  + + +         Q  +     SYN MI   C  
Sbjct: 298 KPDVVTYCSLMDGYCLVKQVNKAKSIFNTMA--------QGGVTANVQSYNIMINGFCKI 349

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A   F+++  K ++ D V +N+LI G  K G    A ++V  M  RGVP D   Y
Sbjct: 350 KKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITY 409

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             ++++  +  +   A   L  M ++G  P    +  +++ L + GR++ A  + + ++ 
Sbjct: 410 NSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLV 469

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           KG    +     +++        ++AL  +  M  +G +PN   ++ ++  L EK +   
Sbjct: 470 KGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDM 529

Query: 570 AVKLL 574
           A KLL
Sbjct: 530 AEKLL 534



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 223/472 (47%), Gaps = 17/472 (3%)

Query: 64  EILGRVGKLN-HARCILL--DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +ILG + K+N +   I L  +M   G+  D   F +LI  + + G    S  +F  + + 
Sbjct: 61  KILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKK 120

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G E +  +   L K +  +G+   A  + +K+++ G    +  Y  ++ G     +   A
Sbjct: 121 GYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAA 180

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           ++    +  + +  +VV YNT+I+   + K ++EA  L++EM  K I P V++Y+ +I G
Sbjct: 181 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISG 240

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +  + + +DA+ +F++M S ++ P+  T++ L+ G C  G++ E + VL  M+++ I P 
Sbjct: 241 FCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKP- 299

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+   C    +N A  +   M +  +      Y I+I  FCK +  D A+ L 
Sbjct: 300 DVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLF 359

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
            ++  K II  P      +  +YN +I  LC +G+   A     ++  +GV  D + +N+
Sbjct: 360 KEMHCKNII--P------DVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNS 411

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           ++    K    D A  ++  M   G+  D   Y  LI+   + G   DA+   + ++  G
Sbjct: 412 ILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKG 471

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           ++     +  +++   ++     A  ++  M + G   N    AK  E +++
Sbjct: 472 YNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPN----AKTYEIIIL 519



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 221/466 (47%), Gaps = 19/466 (4%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
             AL F   V   G F+ ++  +  +I  L +VG+ + A  +L  +  K VQ +  M+  
Sbjct: 143 HQALHFHDKVVALG-FHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 201

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I+S  K  +V E+  ++  M   G+   V +Y AL       G+   A   FNKM+SE 
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I P  +T+++++ GF    +++ A      M  +GI  DVVTY ++++GY   K++++A+
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +F  M +  +   V SY  MI G+  +++ D+A+ +F EM   ++ P+ VTY +L+ GL
Sbjct: 322 SIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C +GK+    K++ EM +R + P D   +  +L   CK+  ++ A  +L  M    I  +
Sbjct: 382 CKSGKISYALKLVDEMHDRGV-PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y ILI+  CK      A  + + L+ K          ++   +Y  MIQ  C N   
Sbjct: 441 MYTYTILIDGLCKGGRLKDAQNIFEDLLVK--------GYNITVYTYTVMIQGFCDNDLF 492

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            KA     ++   G + +   +  +I    ++   D A ++++ M  RG+        CL
Sbjct: 493 DKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFGWKKAYCL 552

Query: 456 IESYLRKGE----PADAKTALDSM----IEDGHSPASSLFRSVMES 493
              + ++      P + ++   S+    +E G    S L + +  S
Sbjct: 553 FTRFFQRRSNLYPPLEVRSGHGSIDLGKVEHGPESKSELLKGLSYS 598



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/510 (22%), Positives = 234/510 (45%), Gaps = 16/510 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN++L+    P    +  +L         +TAI    +M+  GI+ D+VT+N +IN +++
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
                 +  +FA + +K  EP  I+ TT+IKG     +   AL   D++ +     N V 
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ GLC  G+     ++LR +  + + P +  ++  ++   CK   +N A D+   M
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQP-NVVMYNTIIDSMCKVKLVNEAFDLYSEM 222

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +   I  +   Y  LI  FC     + AI L +K++ +EI        + +  +++ ++ 
Sbjct: 223 VSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEI--------NPDVYTFSILVD 274

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
             C  G+  +A+     +MK+G+  D V + +L+ G+      + A  I   M + GV  
Sbjct: 275 GFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTA 334

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +  +Y  +I  + +  +  +A      M      P    + S+++ L + G++  A +++
Sbjct: 335 NVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLV 394

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
             M ++GV  +      IL+AL     V++A+  +  M   G  P+   +  L+  L + 
Sbjct: 395 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKG 454

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G+   A  + +  L +   I + +Y  ++           A ++L K+ + G + + K+ 
Sbjct: 455 GRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTY 514

Query: 625 DKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           + +I  L ++    + D+  +++R  ++RG
Sbjct: 515 EIIILSLFEK---DENDMAEKLLREMIARG 541



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/503 (22%), Positives = 225/503 (44%), Gaps = 11/503 (2%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           I    P F+   +   L      + A+   R +E  G+ + D  T   +I    ++G  +
Sbjct: 50  INPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIAS-DLVTFNILINCFSQLGHTH 108

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            +  +  ++ KKG + +      LI+    KG + +++   D +  LG   +   Y  L 
Sbjct: 109 FSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLI 168

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G+   A +   ++  + ++P    YN ++        +  A   + +M S+GIS
Sbjct: 169 NGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGIS 228

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DVVTY+ +I+G+    K+++A  LF +M  + I P V +++ ++ G+    R  +A  +
Sbjct: 229 PDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNV 288

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
              M    +KP+ VTY +L+ G C   ++ + + +   M +  +     S  + + G  C
Sbjct: 289 LAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF-C 347

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K   ++ A ++ K M   +I  +   Y  LI+  CK+     A+KL+D++ ++ +   P 
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV---PH 404

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
             +     +YN ++  LC N Q  KA     ++  +G+  D   +  LI G  K G    
Sbjct: 405 DKI-----TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKD 459

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  I + +  +G       Y  +I+ +        A   L  M ++G  P +  +  ++ 
Sbjct: 460 AQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIIL 519

Query: 493 SLFEDGRVQTASRVMKSMVEKGV 515
           SLFE      A ++++ M+ +G+
Sbjct: 520 SLFEKDENDMAEKLLREMIARGL 542


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 228/481 (47%), Gaps = 10/481 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++L+    +     E+ K F +MK+ G+   +++ + +  L L+  R  MA   + +M
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 218

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
               I  T +T+N+M+       KL+ A  F   M+  G   +VV+YNT+I+GY+    +
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 278

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A ++   M+ K IEP   +Y ++I G     R ++A  +FD+M    + PNAVTY  L
Sbjct: 279 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 338

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C+ G +        EMV++ I P   S +  L+      G +  A D++K M +  
Sbjct: 339 IDGYCNKGDLERAFSYRDEMVKKGIMPS-VSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I  +A  Y ILI  + +     +A  L ++++ K I   P         +Y  +I  L  
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGI--EPTHV------TYTSLIYVLSR 449

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  +A+  F +++ +GV  D + FN ++ GH   GN + AF ++K M R+ VP D   
Sbjct: 450 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 509

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +  L++   R+G+  +A+  LD M   G  P    + +++      G ++ A RV   M+
Sbjct: 510 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 569

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAV 571
             G    L     +++ L      + A   +  M+  G  P+  + LS++   G     V
Sbjct: 570 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLV 629

Query: 572 K 572
           +
Sbjct: 630 E 630



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 212/435 (48%), Gaps = 15/435 (3%)

Query: 3   ERAWTTRLQN-KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E AW    +  ++R     +  N++ NVL      + A +F  ++E  G F  +  ++  
Sbjct: 209 EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG-FKPNVVSYNT 267

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I      G +  AR IL  M  KG++ D   +  LI    K+G ++E+  +FD M ++G
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 327

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +  +Y+ L      +G    A  Y ++M+ +GI P+  TYN+++   F+  ++  A 
Sbjct: 328 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 387

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              ++M+ +GI  D +TYN +INGY+R     +A  L  EM  K IEPT ++YT++I   
Sbjct: 388 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 447

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R  +A  +F+++    V P+ + + A++ G C  G +     +L+EM  + +PP D
Sbjct: 448 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP-D 506

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  L+  +C+ G +  A  +L  M R  I  +   Y  LI  + +      A ++ D
Sbjct: 507 EVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRD 566

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           +++   I   P         +YN +I+ LC N +   AE   ++++ KG+  D   + +L
Sbjct: 567 EML--SIGFNPTLL------TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618

Query: 421 IRGHSKEGNPDSAFE 435
           I G    GN D+  E
Sbjct: 619 IEGM---GNVDTLVE 630



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 221/480 (46%), Gaps = 14/480 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           +L+  V    + ++ A + F  ++  G+     ET   M+ +  ++ ++  A  +  +M 
Sbjct: 161 DLLVRVCCELRRADEAFKCFYMMKEKGIV-PKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +  +      F +++    K+G ++++ +    M+ LG + +V SY+ +      RG   
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A+R  + M  +GIEP  +TY  ++ G     +LE A   F+ M   G+  + VTYNT+I
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 339

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +GY     ++ A     EM +K I P+V +Y  ++       R  +A  +  EM+   + 
Sbjct: 340 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 399

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+A+TY  L+ G    G   +   +  EM+ + I P  +  +  L+ V  +   +  A D
Sbjct: 400 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT-HVTYTSLIYVLSRRNRMKEADD 458

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + + ++   +  +   +  +++  C     +RA  LL ++  K +   P   +     ++
Sbjct: 459 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSV---PPDEV-----TF 510

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N ++Q  C  G+  +A +   ++ ++G+  D +++N LI G+ + G+   AF +   M  
Sbjct: 511 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 570

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G       Y  LI+   +  E   A+  L  M+  G SP  S + S++E +   G V T
Sbjct: 571 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM---GNVDT 627



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 212/474 (44%), Gaps = 48/474 (10%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA------ 250
           + ++ ++      ++ DEA K F  MKEK I P + +   M+  ++ + R + A      
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 251 ---LRIFDEMKSFDV--------------------------KPNAVTYTALLPGLCDAGK 281
              LRI   + +F++                          KPN V+Y  ++ G    G 
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           +   +++L  M  + I P D+  +  L+   CK G L  A+ +   M+ + +   A  Y 
Sbjct: 278 IEGARRILDAMRVKGIEP-DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            LI+ +C     +RA    D++V+K I+  P        S+YN ++  L   G+ G+A+ 
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIM--PS------VSTYNLLVHALFMEGRMGEADD 388

Query: 402 FFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
             +++ KKG++ D + +N LI G+S+ GN   AF++   M  +G+      Y  LI    
Sbjct: 389 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 448

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           R+    +A    + +++ G SP   +F ++++    +G V+ A  ++K M  K V  +  
Sbjct: 449 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV 508

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
               +++     G VEEA   +D M + G  P+   +++L+S    +G    A ++ D  
Sbjct: 509 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 568

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           L       L +Y  ++  L    +   A  +L +++ KG   D  +   LI G+
Sbjct: 569 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 145/629 (23%), Positives = 274/629 (43%), Gaps = 44/629 (6%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           +++ F W      + H  + +  +I  LG  G+      +L+ M  +G+ + E +F  ++
Sbjct: 88  SMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIM 147

Query: 99  ESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
             Y K G   ++ ++   M+ +   E + KSY+ + ++++    + +A   F  MLS  I
Sbjct: 148 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 207

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
            PT  T+ V++       ++++A+    DM   G   + V Y T+I+  ++  +++EA +
Sbjct: 208 PPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 267

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           L  EM      P   ++  +I G    +R ++A ++ + M      P+ +TY  L+ GLC
Sbjct: 268 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLC 327

Query: 278 -----DA--------------------------GKMVEVQKVLREMVERYIPPKDNSVFM 306
                DA                          G++ + + VL +MV  Y    D   + 
Sbjct: 328 KIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 387

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+    K G +  A +VL+ M           Y IL++ FCK    D A  LL+++   
Sbjct: 388 SLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD 447

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHS 425
              L+P +        +N +I   C   +  +A   FR++ +KG   D   FN+LI G  
Sbjct: 448 G--LKPNTV------GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 499

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           +      A  +++ M   GV  +   Y  LI ++LR+GE  +A+  ++ M+  G      
Sbjct: 500 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEI 559

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            + S+++ L   G V  A  + + M+  G+  +      ++  L   G VEEA+     M
Sbjct: 560 TYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEM 619

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           +  GS P+   F+SL++ L   G+    + +           D  +Y  ++  L   G  
Sbjct: 620 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFV 679

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            +A  +L + +E G V + ++   L+  L
Sbjct: 680 YDACLLLDEGIEDGFVPNDRTWSILLQSL 708



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 13/312 (4%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L DM  KG + +   + +L++ + K G + E+  + + M   G++ +   ++ L     
Sbjct: 405 VLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFC 464

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           +  R   A   F +M  +G +P  +T+N ++ G     +++ A+    DM S G+  + V
Sbjct: 465 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 524

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYNT+IN + R  ++ EA KL  EM  +      I+Y ++IKG       D A  +F++M
Sbjct: 525 TYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               + P++++   L+ GLC +G + E  +  +EMV R   P D   F  L+   C++G 
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP-DIVTFNSLINGLCRAGR 643

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII-------- 369
           +     + + +    IP +   Y  L+   CK      A  LLD+ +E   +        
Sbjct: 644 IEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSI 703

Query: 370 ----LRPQSTLD 377
               L PQ TLD
Sbjct: 704 LLQSLVPQETLD 715



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 145/298 (48%), Gaps = 1/298 (0%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           ++  +++   ++GK++ A  +L +M   G++ +   F  LI ++ K+  + E+V+IF  M
Sbjct: 420 SYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 479

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G +  V ++++L   +        A      M+SEG+     TYN ++  F    ++
Sbjct: 480 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 539

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A +   +M  +G  LD +TYN++I G  R  ++D+A  LF +M    + P+ IS   +
Sbjct: 540 KEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNIL 599

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G       ++A+    EM      P+ VT+ +L+ GLC AG++ +   + R++    I
Sbjct: 600 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 659

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
           PP D   +  L+   CK G +  A  +L   I          + IL+++    E  DR
Sbjct: 660 PP-DTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 5/254 (1%)

Query: 27  YNVLHGAKNSEH----ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N L  A   EH    A++ FR + R G    D  T   +I  L  V ++ HA  +L DM
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDM 514

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +GV  +   +  LI ++ ++G ++E+ K+ + M   G      +Y++L K + R G  
Sbjct: 515 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEV 574

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F KML +G+ P+  + N+++ G   S  +E A+ F ++M  RG + D+VT+N++
Sbjct: 575 DKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 634

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ING  R  ++++   +F +++ + I P  ++Y T++          DA  + DE      
Sbjct: 635 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGF 694

Query: 263 KPNAVTYTALLPGL 276
            PN  T++ LL  L
Sbjct: 695 VPNDRTWSILLQSL 708


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 278/572 (48%), Gaps = 34/572 (5%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F +LI     +G ++++V I  +M++ G   ++ SY+ L     ++GR+  A    + M 
Sbjct: 178 FNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHME 237

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +GI+    TYN+ +     + +        + M+++ I+ + V+YNT+ING+ +  K+ 
Sbjct: 238 CKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIG 297

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A ++F EM E N+ P +I+Y  +I GY      ++ALR+ D M++ DV+PN VT   LL
Sbjct: 298 VATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLL 357

Query: 274 PGLCDAGKMVEVQKVLREMVERY------IPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
            GL  + K      V R ++ERY      +    ++V +  L   C++G L+ A  +L  
Sbjct: 358 NGLYKSAKF----DVARNILERYSINRTSLNCISHTVMIDGL---CRNGLLDEAFQLLIE 410

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M +  +  +   + +LI  FCK    ++A +++ K+  +  +  P + +      ++ +I
Sbjct: 411 MCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFV--PNNVI------FSTLI 462

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
            + C  G   +   F+  +   G   D    N+L+    + G    A E +  + R G+ 
Sbjct: 463 YNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLV 522

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            ++  + C+I  Y   G+ + A +  D MI  GH P+   + S+++ L +      A ++
Sbjct: 523 PNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKL 582

Query: 507 MKSMVEKGVKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
           +K +    +   +D ++   ++  +   G++ EA+   + M+Q+  +P+   +  +LS L
Sbjct: 583 LKKL--HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLAS--YEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
             +G+ + A   L   + ++ I+ L S  Y   +D L  AG++  A   LFK ME+ G++
Sbjct: 641 IREGRLVCAFIFLGRLMQKE-ILTLNSIVYTCFIDGLFKAGQS-KAALYLFKEMEEKGLS 698

Query: 620 -DWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
            D  + + +  G ++ G    A  L    R +
Sbjct: 699 LDLIALNSITDGYSRMGKVFSASSLISKTRNK 730



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 152/639 (23%), Positives = 277/639 (43%), Gaps = 38/639 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMI--EILGRVGKLNHARCILLDMPKK--------GVQ 88
           AL+F +WV +      +  TH+  I   +L R     +A+ IL  + +K        GV 
Sbjct: 35  ALKFLKWVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFLFGVL 94

Query: 89  WDE--------DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            D          +F++LI  Y ++G+V  +V  F  M   G + SV + + +   +++  
Sbjct: 95  MDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNC 154

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R  +   +F +ML+  + P   ++N+++    +  KL+ A+     M+  G    +V+YN
Sbjct: 155 RAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYN 214

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++   +  +   A  L   M+ K I+  V +Y   I       R+     +  +M++ 
Sbjct: 215 TLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK 274

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + PN V+Y  L+ G    GK+    +V  EM+E  + P +   +  L+   C +G+   
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSP-NLITYNILINGYCINGNFEE 333

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +L  M    +       G L+    K+  +D A  +L    E+  I R      +  
Sbjct: 334 ALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL----ERYSINRTS----LNC 385

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            S+  MI  LC NG   +A     ++ K GV  D + F+ LI G  K GN + A E++  
Sbjct: 386 ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSK 445

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           + R G   +   +  LI +  + G   +      +M  +G +  +    S++ SL E+G+
Sbjct: 446 IYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGK 505

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           +  A   +  +   G+  N      I+      G    A    D M+  G  P+   + S
Sbjct: 506 LVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGS 565

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCI---IDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           LL VL +      A KLL       CI   +D  SY  ++  +  +G  L A  +  +++
Sbjct: 566 LLKVLCKGQNFWEARKLLK---KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMI 622

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADI-LSRMIRGEM 651
           +   + D  +   +++GL +EG    A I L R+++ E+
Sbjct: 623 QNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEI 661



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 130/619 (21%), Positives = 254/619 (41%), Gaps = 57/619 (9%)

Query: 2   AERAWTTRLQNKIRALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           A   W    Q     + P     N++ +VL      + A+     +ER G +     ++ 
Sbjct: 156 AHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNG-YVPTIVSYN 214

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            ++    + G+   A  ++  M  KG+Q D   + + I+S  +     +   +   M+  
Sbjct: 215 TLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK 274

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
            +  +  SY+ L    ++ G+  +A R FN+M+   + P   TYN+++ G+ ++   E A
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA 334

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +R  + M++  +  + VT  T++NG  +  K D A  +             IS+T MI G
Sbjct: 335 LRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDG 394

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV-ERYIPP 299
                  D+A ++  EM    V P+ +T++ L+ G C  G + + ++V+ ++  E ++P 
Sbjct: 395 LCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPN 454

Query: 300 K---------------------------------DNSVFMKLLGVQCKSGHLNAAADVLK 326
                                             DN     L+   C++G L  A + L 
Sbjct: 455 NVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLH 514

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            + R+ +   +  +  +I  +        A  + DK++       P         +Y  +
Sbjct: 515 HISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSP--------FTYGSL 566

Query: 387 IQHLCHNGQTGKAEIFFRQLMKK-----GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           ++ LC      +A    R+L+KK       +D +++N LI   SK GN   A  + + M 
Sbjct: 567 LKVLCKGQNFWEA----RKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMI 622

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE-DGHSPASSLFRSVMESLFEDGRV 500
           +  +  D+  Y C++   +R+G    A   L  +++ +  +  S ++   ++ LF+ G+ 
Sbjct: 623 QNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQS 682

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
           + A  + K M EKG+  +L  +  I +     G V  A   I        +PN   F+ L
Sbjct: 683 KAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNIL 742

Query: 558 LSVLSEKGKTIAAVKLLDF 576
           L   S     ++  KL + 
Sbjct: 743 LHGYSRGQDIMSCFKLYNL 761



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 133/587 (22%), Positives = 236/587 (40%), Gaps = 50/587 (8%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL     +E  G+   D  T+   I+ L R  +      +L  M  K +  +E  +  LI
Sbjct: 229 ALVLIHHMECKGI-QADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             + K+G +  + ++F+ M +L +  ++ +Y+ L       G +  A R  + M +  + 
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVR 347

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   T   +L G + S K + A    E       SL+ +++  MI+G  R   +DEA +L
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQL 407

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM +  + P +I+++ +I G+  V   + A  +  ++      PN V ++ L+   C 
Sbjct: 408 LIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCK 467

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPT-- 335
            G + E  K    M        DN     L+   C++G L  A + L  + R+  +P   
Sbjct: 468 VGNVYEGMKFYAAM-NLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSV 526

Query: 336 --------------------------EAGH------YGILIENFCKAEMYDRAIKLLDKL 363
                                       GH      YG L++  CK + +  A KLL KL
Sbjct: 527 TFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL 586

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
                       L ++  SYN +I  +  +G   +A   F ++++  +L D   +  ++ 
Sbjct: 587 --------HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILS 638

Query: 423 GHSKEGNPDSAFEIV-KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
           G  +EG    AF  + ++M +  +  ++  Y C I+   + G+   A      M E G S
Sbjct: 639 GLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLS 698

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
                  S+ +     G+V +AS ++     K V  NL     +L        +      
Sbjct: 699 LDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKL 758

Query: 542 IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
            +LM +SG  PN   + SL+  L   G     +K+L   +     ID
Sbjct: 759 YNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTID 805



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 131/661 (19%), Positives = 273/661 (41%), Gaps = 38/661 (5%)

Query: 37   EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
            + A Q    + + G++  D  T   +I    +VG LN A+ ++  + ++G   +  +F  
Sbjct: 402  DEAFQLLIEMCKDGVY-PDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFST 460

Query: 97   LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
            LI +  K G V E +K +  M   G      + ++L   +   G+ + A+ + + +   G
Sbjct: 461  LIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520

Query: 157  IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
            + P   T++ ++ G+        A   F+ M S G      TY +++    + +   EA 
Sbjct: 521  LVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 217  KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            KL  ++    +    ISY T+I          +A+R+F+EM   ++ P++ TYT +L GL
Sbjct: 581  KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640

Query: 277  CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
               G++V     L  ++++ I   ++ V+   +    K+G   AA  + K M    +  +
Sbjct: 641  IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700

Query: 337  AGHYGILIENFCKAEMYDRAIKLLDKLVEKEII--------------------------- 369
                  + + + +      A  L+ K   K +I                           
Sbjct: 701  LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYN 760

Query: 370  LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEG 428
            L  +S       +Y+ +I  LC++G         +  + +   +D + FN LIR   +  
Sbjct: 761  LMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIN 820

Query: 429  NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
            + D   ++   M    V  D D    + +  +R+    +    +  M++ G  P S  + 
Sbjct: 821  DLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYC 880

Query: 489  SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            ++M+ +   G +Q A ++   MV  G+  +      ++  L + G +EEA+  +  M++ 
Sbjct: 881  TMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRM 940

Query: 549  GSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
              +P    F +L+ V  +K     A  L          +D+ +Y  ++ A  A G  + A
Sbjct: 941  KKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITA 1000

Query: 606  YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR------MIRGEMSRGSQKEK 659
                 +I +KG + +  +   L++ ++ +    + +I+ +      ++ G +   SQK  
Sbjct: 1001 LDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGKSQKSC 1060

Query: 660  K 660
            +
Sbjct: 1061 R 1061


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/562 (23%), Positives = 250/562 (44%), Gaps = 57/562 (10%)

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           +LI+     G V ++ ++F     LG   +V +Y+ +     R GR   A+R  + M   
Sbjct: 103 ILIKRLCSGGRVADAERVF---ATLGASATVVTYNTMVNGYCRAGRIEDARRLISGM--- 156

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
              P   T+N ++    +  ++  A+  F+DM  RG S  VVTY+ +++   +     +A
Sbjct: 157 PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQA 216

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             L  EM+ K  EP +++Y  +I         D+AL I  ++ S   KP+AVTYT +L  
Sbjct: 217 MVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKS 276

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC + +  EV+++  EM      P + +                                
Sbjct: 277 LCGSERWKEVEELFAEMASNKCAPDEVT-------------------------------- 304

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               +  ++ + C+  + DRAIK++D + E   I         +  +Y+ ++  LC  G+
Sbjct: 305 ----FNTIVTSLCQQGLVDRAIKVVDHMSEHGCI--------PDIVTYSSILDGLCDVGR 352

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
              A     +L   G   D +A+  +++G       + A E++  M     P D   +  
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNT 412

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I S  +KG    A   ++ M E+G +P    + S+++ L  +  +  A  ++ ++   G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
            K ++     +L+ L      E+A   +  MM S   P+   F+++++ L +KG  + A+
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           + L       CI + ++Y  V+DALL AGKT  A  +L  +    G  D  + + +I+ +
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM--TNGTPDLITYNTVISNI 590

Query: 632 NQEGNTKQA-DILSRMIRGEMS 652
            + G  ++A D+L  M+   +S
Sbjct: 591 TKAGKMEEALDLLRVMVSNGLS 612



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 129/578 (22%), Positives = 245/578 (42%), Gaps = 53/578 (9%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  M+    R G++  AR ++  MP      D   F  LI +   +G V +++ +FD M
Sbjct: 132 TYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDM 188

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G   SV +Y  L     +   Y  A    ++M ++G EP   TYNV++        +
Sbjct: 189 LHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDV 248

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM--------------- 222
           + A+    D+ S G   D VTY  ++      ++  E E+LFAEM               
Sbjct: 249 DEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTI 308

Query: 223 --------------------KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
                                E    P +++Y++++ G   V R DDA+ +   +KS+  
Sbjct: 309 VTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 368

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           KP+ + YT +L GLC   +    ++++ EMV    PP D   F  ++   C+ G ++ A 
Sbjct: 369 KPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPP-DEVTFNTVIASLCQKGLVDRAI 427

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V++ M       +   Y  +I+  C     D A++LL  L  +    +P      +  +
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL--QSYGCKP------DIVT 479

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           +N +++ LC   +   AE     +M      D   FN +I    ++G    A E +KIM 
Sbjct: 480 FNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMA 539

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
             G   +   Y  ++++ L+ G+  +A   L  M     +P    + +V+ ++ + G+++
Sbjct: 540 ENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKME 597

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A  +++ MV  G+  +      +   +      + A+  +  +   G  P+   ++ +L
Sbjct: 598 EALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDIL 657

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
               +  +T  A+      +   C+ D ++Y  +L+AL
Sbjct: 658 LGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 3/254 (1%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L   +  + A++    ++  G    D  T   +++ L  V +   A  ++++M
Sbjct: 445 YNSIIDGLCNERCIDDAMELLSNLQSYGC-KPDIVTFNTLLKGLCSVDRWEDAEQLMVNM 503

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
                  D   F  +I S  +KG++ ++++   IM + G   +  +Y+ +   +L+ G+ 
Sbjct: 504 MHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKT 563

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +  + M +    P   TYN ++     + K+E A+     M S G+S D +TY ++
Sbjct: 564 QEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSL 621

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
             G  R    D A ++   +++  + P    Y  ++ G+    R D A+  F  M S   
Sbjct: 622 AYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGC 681

Query: 263 KPNAVTYTALLPGL 276
            P+  TY  LL  L
Sbjct: 682 MPDESTYIILLEAL 695



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 2/208 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I  L + G L  A   L  M + G   ++  + +++++  K G  QE++K+ 
Sbjct: 511 DATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G    + +Y+ +   I + G+   A      M+S G+ P   TY  + +G    
Sbjct: 571 SGMTN-GTPDLI-TYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICRE 628

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              + AIR    ++  G+S D   YN ++ G+ +  + D A   FA M      P   +Y
Sbjct: 629 DGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTY 688

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDV 262
             +++        D+A ++   + S  V
Sbjct: 689 IILLEALAYECLLDEAKQLLVNLCSLGV 716


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 195/404 (48%), Gaps = 12/404 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L ++G+   A  +L  M + G Q +   +  LI+S  +  +V E++ IF
Sbjct: 197 DVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIF 256

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             MK  G+   + +Y +L + + +  R+  A    N+M S  I P   T+NV++  F   
Sbjct: 257 SYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKE 316

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K+  A+   + M   G+  +VVTY++++ GY+ +  + EA KLF  M  K  +P + SY
Sbjct: 317 GKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSY 376

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I GY   +R D+A+++F+EM    + PN V+Y  L+ G C  GK+ E Q + R M  
Sbjct: 377 NILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCT 436

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P D   +  LL   CK G+L  A  + +AM    +      Y IL+   CK+  + 
Sbjct: 437 NGNLP-DLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHK 495

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            A KL  +L  +   L+P   L      Y  +I  LC  G   +A   FR +   G   D
Sbjct: 496 DARKLFSELFVQG--LQPHVQL------YTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
            +++N +IRG  +  +   A  +V  M  RG    AD   CL E
Sbjct: 548 EISYNVIIRGLLQHKDESRALLLVGEMRDRGFI--ADVRPCLSE 589



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 208/488 (42%), Gaps = 45/488 (9%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M+ +G+  ++ +         +  R  +      K++  G++PT  T+  ++ G     +
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A+  F+DM ++G   DV TYNT+ING  +  +   A  L  +M+E   +P +++Y+T
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I         ++AL IF  MK+  + P+  TYT+L+ GLC   +  E   +L EM    
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI-PTEAGH---------------- 339
           I P D   F  L+   CK G ++ A  VLK M  + + P    +                
Sbjct: 299 IMP-DIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357

Query: 340 ------------------YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
                             Y ILI  +CKA+  D A++L ++++ +   L P +       
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG--LTPNNV------ 409

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           SYN +I   C  G+  +A+  FR +   G L D   ++ L+ G  K+G    AF + + M
Sbjct: 410 SYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAM 469

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
               +  +   Y  L+ +  + G   DA+     +   G  P   L+ +++  L ++G +
Sbjct: 470 QSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLL 529

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
             A    ++M   G   +      I+  LL       AL  +  M   G + +    LS 
Sbjct: 530 DEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRPCLSE 589

Query: 561 LSEKGKTI 568
           + +  K +
Sbjct: 590 VCQGKKVM 597



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 191/423 (45%), Gaps = 10/423 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  L +VG+   A  +  DM  KG Q D   +  +I    K G    +  +   M
Sbjct: 165 TFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM 224

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ++ G + ++ +Y  L   + R      A   F+ M ++GI P   TY  ++ G     + 
Sbjct: 225 EEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRW 284

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A     +M S  I  D+VT+N +++ + +  K+ EA  +   M E  +EP V++Y+++
Sbjct: 285 KEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSL 344

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + GY       +A ++F  M +   KPN  +Y  L+ G C A ++ E  ++  EM+ + +
Sbjct: 345 MYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGL 404

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +N  +  L+   C+ G L  A D+ + M       +   Y IL++ FCK     +A 
Sbjct: 405 TP-NNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAF 463

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA- 416
           +L   +  +   L+P   +      Y  ++  +C +G    A   F +L  +G+   V  
Sbjct: 464 RLFRAM--QSTYLKPNLVM------YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQL 515

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  +I G  KEG  D A E  + M   G P D  +Y  +I   L+  + + A   +  M 
Sbjct: 516 YTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMR 575

Query: 477 EDG 479
           + G
Sbjct: 576 DRG 578



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 220/475 (46%), Gaps = 23/475 (4%)

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           +  I   + M+  G+S ++ T +  +N + + +++D    + A++ +  ++PT++++TT+
Sbjct: 110 DVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTL 169

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G   V     A+ +FD+M +   +P+  TY  ++ GLC  G+      +L++M E   
Sbjct: 170 INGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGC 229

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +   +  L+   C+   +N A D+   M    I  +   Y  LI+  CK   +  A 
Sbjct: 230 QP-NMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEAS 288

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--V 415
            LL+++    I+  P      +  ++N ++   C  G+  +A    + + + GV +P  V
Sbjct: 289 ALLNEMTSLNIM--P------DIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV-EPNVV 339

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +++L+ G+S   +   A ++  +M  +G   +  +Y  LI  Y +     +A    + M
Sbjct: 340 TYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEM 399

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           I  G +P +  + +++    + G+++ A  + ++M   G   +L   + +L+    +G++
Sbjct: 400 IHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYL 459

Query: 536 EEALGRIDLMMQSGSV-PN---FDSLLSVLSEKGKTIAAVKLLD--FCLGRDCIIDLASY 589
            +A  R+   MQS  + PN   +  L+  + + G    A KL    F  G    + L  Y
Sbjct: 460 GKAF-RLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQL--Y 516

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQADIL 643
             +++ L   G    A    F+ ME  G   D  S + +I GL Q  +  +A +L
Sbjct: 517 TTIINGLCKEGLLDEALEA-FRNMEADGCPPDEISYNVIIRGLLQHKDESRALLL 570



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 94/478 (19%), Positives = 183/478 (38%), Gaps = 49/478 (10%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG----------------- 240
           TY    +  + F+ +D+A   F  M  +   P +I +  ++                   
Sbjct: 59  TYQHKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQ 118

Query: 241 -------------------YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
                              +  ++R D    +  ++    ++P  VT+T L+ GLC  G+
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
             +  ++  +MV +   P D   +  ++   CK G   AAA +LK M           Y 
Sbjct: 179 FAQAVELFDDMVAKGCQP-DVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYS 237

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            LI++ C+  + + A+ +   +  K I          +  +Y  +IQ LC   +  +A  
Sbjct: 238 TLIDSLCRDRLVNEALDIFSYMKAKGI--------SPDIFTYTSLIQGLCKFSRWKEASA 289

Query: 402 FFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
              ++    ++ D V FN L+    KEG    A  ++K M   GV  +   Y  L+  Y 
Sbjct: 290 LLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYS 349

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
              +  +A+     MI  G  P    +  ++    +  R+  A ++   M+ +G+  N  
Sbjct: 350 LWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNV 409

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
               ++      G + EA      M  +G++P+   +  LL    ++G    A +L    
Sbjct: 410 SYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAM 469

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
                  +L  Y  ++ A+  +G   +A  +  ++  +G     +    +I GL +EG
Sbjct: 470 QSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEG 527


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 228/481 (47%), Gaps = 10/481 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F++L+    +     E+ K F +MK+ G+   +++ + +  L L+  R  MA   + +M
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 240

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
               I  T +T+N+M+       KL+ A  F   M+  G   +VV+YNT+I+GY+    +
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 300

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A ++   M+ K IEP   +Y ++I G     R ++A  +FD+M    + PNAVTY  L
Sbjct: 301 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 360

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C+ G +        EMV++ I P   S +  L+      G +  A D++K M +  
Sbjct: 361 IDGYCNKGDLERAFSYRDEMVKKGIMPS-VSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I  +A  Y ILI  + +     +A  L ++++ K I   P         +Y  +I  L  
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGI--EPTHV------TYTSLIYVLSR 471

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  +A+  F +++ +GV  D + FN ++ GH   GN + AF ++K M R+ VP D   
Sbjct: 472 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 531

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +  L++   R+G+  +A+  LD M   G  P    + +++      G ++ A RV   M+
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 591

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAV 571
             G    L     +++ L      + A   +  M+  G  P+  + LS++   G     V
Sbjct: 592 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLV 651

Query: 572 K 572
           +
Sbjct: 652 E 652



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 212/435 (48%), Gaps = 15/435 (3%)

Query: 3   ERAWTTRLQN-KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E AW    +  ++R     +  N++ NVL      + A +F  ++E  G F  +  ++  
Sbjct: 231 EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG-FKPNVVSYNT 289

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I      G +  AR IL  M  KG++ D   +  LI    K+G ++E+  +FD M ++G
Sbjct: 290 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 349

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +  +Y+ L      +G    A  Y ++M+ +GI P+  TYN+++   F+  ++  A 
Sbjct: 350 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 409

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              ++M+ +GI  D +TYN +INGY+R     +A  L  EM  K IEPT ++YT++I   
Sbjct: 410 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 469

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R  +A  +F+++    V P+ + + A++ G C  G +     +L+EM  + +PP D
Sbjct: 470 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP-D 528

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  L+  +C+ G +  A  +L  M R  I  +   Y  LI  + +      A ++ D
Sbjct: 529 EVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRD 588

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           +++   I   P         +YN +I+ LC N +   AE   ++++ KG+  D   + +L
Sbjct: 589 EML--SIGFNPTLL------TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640

Query: 421 IRGHSKEGNPDSAFE 435
           I G    GN D+  E
Sbjct: 641 IEGM---GNVDTLVE 652



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 221/480 (46%), Gaps = 14/480 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           +L+  V    + ++ A + F  ++  G+     ET   M+ +  ++ ++  A  +  +M 
Sbjct: 183 DLLVRVCCELRRADEAFKCFYMMKEKGIV-PKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +  +      F +++    K+G ++++ +    M+ LG + +V SY+ +      RG   
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A+R  + M  +GIEP  +TY  ++ G     +LE A   F+ M   G+  + VTYNT+I
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 361

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +GY     ++ A     EM +K I P+V +Y  ++       R  +A  +  EM+   + 
Sbjct: 362 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 421

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+A+TY  L+ G    G   +   +  EM+ + I P  +  +  L+ V  +   +  A D
Sbjct: 422 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT-HVTYTSLIYVLSRRNRMKEADD 480

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + + ++   +  +   +  +++  C     +RA  LL ++  K +   P   +     ++
Sbjct: 481 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSV---PPDEV-----TF 532

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N ++Q  C  G+  +A +   ++ ++G+  D +++N LI G+ + G+   AF +   M  
Sbjct: 533 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 592

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G       Y  LI+   +  E   A+  L  M+  G SP  S + S++E +   G V T
Sbjct: 593 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM---GNVDT 649



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 212/474 (44%), Gaps = 48/474 (10%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA------ 250
           + ++ ++      ++ DEA K F  MKEK I P + +   M+  ++ + R + A      
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 251 ---LRIFDEMKSFDV--------------------------KPNAVTYTALLPGLCDAGK 281
              LRI   + +F++                          KPN V+Y  ++ G    G 
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           +   +++L  M  + I P D+  +  L+   CK G L  A+ +   M+ + +   A  Y 
Sbjct: 300 IEGARRILDAMRVKGIEP-DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            LI+ +C     +RA    D++V+K I+  P        S+YN ++  L   G+ G+A+ 
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIM--PS------VSTYNLLVHALFMEGRMGEADD 410

Query: 402 FFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
             +++ KKG++ D + +N LI G+S+ GN   AF++   M  +G+      Y  LI    
Sbjct: 411 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 470

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           R+    +A    + +++ G SP   +F ++++    +G V+ A  ++K M  K V  +  
Sbjct: 471 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV 530

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
               +++     G VEEA   +D M + G  P+   +++L+S    +G    A ++ D  
Sbjct: 531 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 590

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           L       L +Y  ++  L    +   A  +L +++ KG   D  +   LI G+
Sbjct: 591 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 151/633 (23%), Positives = 281/633 (44%), Gaps = 70/633 (11%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R+G   +   I+ ++   G   D   F  LI+ Y K G +  ++ + + M++ G+   + 
Sbjct: 124 RIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIV 183

Query: 128 SYDALFKLILRRGRYMMAKR---------------YFN------KMLSEGIEPTRHTYNV 166
           SY+ L     +RG Y  AK                +FN      K  +  +E    TY  
Sbjct: 184 SYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTT 243

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  +     LE A   +E+M   G   DVVTY++++NG  +  ++ EA++L  EMK+  
Sbjct: 244 IISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMG 303

Query: 227 IEPTVISYTTMIK-----------------------------------GYVAVERADDAL 251
           ++P  ++YTT+I                                    G     +  +A 
Sbjct: 304 VDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAE 363

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            +F  +   ++ PN++TYTAL+ G C  G M  V+ +L+EM E++I P +   +  ++  
Sbjct: 364 DMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINP-NVITYSSIING 422

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
             K G L+ A +V+K M+  +I   A  Y ILI+ +CKA   + A  L +++        
Sbjct: 423 YTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM-------- 474

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP 430
             S L +    ++ ++ +L    +  +AE   + +  +G +LD V + +L+ G  K G  
Sbjct: 475 KLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKE 534

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
            +A  +V+ M  + +P D   Y  LI   L  G+  +AK+    MIE G +P  + +  +
Sbjct: 535 SAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQATYNIM 593

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           +++  + G +  A  +   M    +  +      ++  L   G +E+A+  ++ M   G 
Sbjct: 594 IKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGI 653

Query: 551 VPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
            PN      LL+  S+ GK  A +++ +  +     I+  +Y  ++        T  A S
Sbjct: 654 HPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATS 713

Query: 608 ILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +L  ++  G V D  + + LI G  +  + K+A
Sbjct: 714 VLKYMIRDGFVADTVTYNALIRGYCESSHVKKA 746



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 226/529 (42%), Gaps = 79/529 (14%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I    + G L+ A  ++  M  + +  +  ++ +LI+ Y K G  + +  +++ M
Sbjct: 415 TYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM 474

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K  G++ +   +D L   + R  R   A+     + S G+      Y  ++ GFF + K 
Sbjct: 475 KLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKE 534

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+   E+M  + I  DVVTYN +ING     K  EA+ +++ M E  + P   +Y  M
Sbjct: 535 SAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIM 593

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           IK Y      D+AL +++EMKS  + P+++T   L+ GL +AG++ +   VL EM    I
Sbjct: 594 IKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGI 653

Query: 298 PPKDNSVFMK-LLGVQCKSGHLNA-----------------------------------A 321
            P  N V  + LL    KSG  NA                                   A
Sbjct: 654 HP--NLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKA 711

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI----KLLDKLVEKEIILR------ 371
             VLK MIR     +   Y  LI  +C++    +A+    ++L++ V   I+        
Sbjct: 712 TSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGG 771

Query: 372 -----------------PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
                             ++ L+ +AS+Y+ +I      G   ++   + +++ +G +  
Sbjct: 772 LLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPK 831

Query: 415 VA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY------------LR 461
            + +N LI   +K G  D A E++  M  RGVP  +  Y  LI  +            L+
Sbjct: 832 TSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLK 891

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           K    DAK  +  M + G  P  S    +  +    G++  A +++K +
Sbjct: 892 KIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEI 940



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 141/627 (22%), Positives = 274/627 (43%), Gaps = 30/627 (4%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRE--------------THLKMIEILGRVGKLNHARCI 78
           AK+  H +   R V+ +  FN D                T+  +I    +   L  AR +
Sbjct: 201 AKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARAL 260

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
             +M   G   D   +  ++    K G + E+ ++   MK++GV+ +  +Y  L   + +
Sbjct: 261 YEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFK 320

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G    A    ++++  G+         ++ G F S K + A   F  +    +  + +T
Sbjct: 321 AGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSIT 380

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y  +I+GY +   M+  E L  EM+EK+I P VI+Y+++I GY      D+A+ +  +M 
Sbjct: 381 YTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKML 440

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG-H 317
             ++ PNA  Y  L+ G C AGK      +  EM  +    K N+V   +L    K G  
Sbjct: 441 DQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM--KLSGLKVNNVLFDVLVNNLKRGKR 498

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           ++ A ++LK +    +  +  +Y  L++ F KA     A+ +++++ EK I         
Sbjct: 499 MDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSI--------P 550

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
            +  +YN +I  L  +G+  +A+  +  +++ G+  +   +N +I+ + K+G  D+A E+
Sbjct: 551 FDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALEL 609

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M    +   +     L+      GE   A   L+ M   G  P   + R ++ +  +
Sbjct: 610 WNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSK 669

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G+     ++ + +V+ G+K N +    ++         ++A   +  M++ G V +   
Sbjct: 670 SGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVT 729

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +++L+    E      A+      L      ++ +Y  +L  LL AG       +  K+ 
Sbjct: 730 YNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMK 789

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           E G   D  + D LI+G  + GN K++
Sbjct: 790 ENGLNPDASTYDTLISGYGKIGNKKES 816



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 136/595 (22%), Positives = 247/595 (41%), Gaps = 67/595 (11%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++  LI  +   G+V +   I+  M    V  +V +++ L     + G  ++A    + +
Sbjct: 12  LWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILA---LDLL 68

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            +  +E    TYN ++WGF     +  A  F   M  +    D +T N ++ G+ R    
Sbjct: 69  RNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLA 128

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
              E++   +        VI + T+I GY        AL + + M+   +  + V+Y  L
Sbjct: 129 KYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTL 188

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G+  + + +L E+ E     KD SVF  +     K  +LN  AD++       
Sbjct: 189 INGFCKRGEYDKAKSLLHEISESR-GVKD-SVFFNIDDRIKKDDNLNLEADLIT------ 240

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
                  Y  +I  +CK    + A  L ++++    +  P      +  +Y+ ++  LC 
Sbjct: 241 -------YTTIISTYCKQHGLEEARALYEEMIINGFL--P------DVVTYSSIVNGLCK 285

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV----- 445
           +G+  +A+   R++ K GV DP  VA+  LI    K G+   AF     +  RG+     
Sbjct: 286 DGRLSEAQELLREMKKMGV-DPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLV 344

Query: 446 --------------PRDAD----------------AYICLIESYLRKGEPADAKTALDSM 475
                         P++A+                 Y  LI+ Y + G+    ++ L  M
Sbjct: 345 MCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEM 404

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            E   +P    + S++    + G +  A  VMK M+++ +  N  + A +++     G  
Sbjct: 405 EEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQ 464

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           E A    + M  SG   N   FD L++ L    +   A +LL     R  ++D  +Y  +
Sbjct: 465 EIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSL 524

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           +D    AGK   A +++ ++ EK    D  + + LI GL + G  +   + S MI
Sbjct: 525 MDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMI 579



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 44/346 (12%)

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M++ NI PT++ +  +I  + A         I+ EM    V PN  T+  L+   C  G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 282 MVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           ++    +LR + VE      D   +  ++   C+ G +N A   L  M++     +    
Sbjct: 61  LILALDLLRNVDVEV-----DTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITC 115

Query: 341 GILIENFCKAEMYDRAIKLLDKLVE----KEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
            IL++ FC+  +     +++D LV     K++I             +N +I   C  G+ 
Sbjct: 116 NILVKGFCRIGLAKYGERIMDNLVSGGTCKDVI------------GFNTLIDGYCKAGEM 163

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV-KIMGRRGV--------- 445
             A     ++ K+G+L D V++N LI G  K G  D A  ++ +I   RGV         
Sbjct: 164 SLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNID 223

Query: 446 -----------PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
                        D   Y  +I +Y ++    +A+   + MI +G  P    + S++  L
Sbjct: 224 DRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGL 283

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            +DGR+  A  +++ M + GV  N      ++++L   G   EA  
Sbjct: 284 CKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFA 329



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 142/318 (44%), Gaps = 4/318 (1%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           ++ T+  MI+   + G+L++A  +  +M    +         L+    + G +++++ + 
Sbjct: 586 NQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVL 645

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M  +G+  ++  +  L     + G+     +   +++  G++  +  YN ++  F   
Sbjct: 646 NEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRL 705

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              + A    + M   G   D VTYN +I GY     + +A   + +M  + + P +++Y
Sbjct: 706 RMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTY 765

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G +      +   +FD+MK   + P+A TY  L+ G    G   E  ++  EMV 
Sbjct: 766 NLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVA 825

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY- 353
           +   PK  S +  L+    K G ++ A ++L  M    +P  +  Y ILI  +C    + 
Sbjct: 826 QGFVPK-TSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHP 884

Query: 354 --DRAIKLLDKLVEKEII 369
             DR +K + +   K +I
Sbjct: 885 DLDRTLKKIYRTDAKNLI 902



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 125/282 (44%), Gaps = 13/282 (4%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           H ++ N    +  +   LQ    +   GL   ++E +  +I +  R+     A  +L  M
Sbjct: 660 HRVLLNASSKSGKANAVLQMHEQLVDMGL-KINQEAYNNLIVVFCRLRMTKKATSVLKYM 718

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G   D   +  LI  Y +   V++++  +  M   GV  ++ +Y+ L   +L  G  
Sbjct: 719 IRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLM 778

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 F+KM   G+ P   TY+ ++ G+      + +IR + +M ++G      TYN +
Sbjct: 779 AERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVL 838

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+ + +  KMD+A +L  EM+ + + P+  +Y  +I G+  + +  D  R   ++   D 
Sbjct: 839 ISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDA 898

Query: 263 K------------PNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           K            P   T   +       GKM++ +K+L+E+
Sbjct: 899 KNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEI 940


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 227/521 (43%), Gaps = 47/521 (9%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L +    + A  +   M   G + +   +  LI  Y   G  +E V++ 
Sbjct: 233 DVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQML 292

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M   G++    +Y +L   + + GR   A+ +F+ M+ +GI+P   TY +++ G+   
Sbjct: 293 EEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATK 352

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L     F + M   G+S D   +N   + Y +   +D+A  +F +M++  + P V++Y
Sbjct: 353 GALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNY 412

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I     + R DDA   F++M +  V PN V + +L+ GLC   K    ++++ EM++
Sbjct: 413 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 472

Query: 295 RYIPPKDNSVFMKLLGVQ-CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           + I P  N+VF   L    C  G +     ++  M  + +  +A  Y  LI  +C     
Sbjct: 473 QGICP--NAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRT 530

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-- 411
           D A K+ D +V   I L P         +YN ++   C   +   A   FR++++KGV  
Sbjct: 531 DEAEKVFDGMV--SIGLSPTEV------TYNTLLHGYCSASRIDDAYCLFREMLRKGVTP 582

Query: 412 ----------------------------------LDPVAFNNLIRGHSKEGNPDSAFEIV 437
                                              D   +N ++ G  K    D AF++ 
Sbjct: 583 GVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMF 642

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           + +  +G+  +   +  +I + L+ G   DA     ++  +G  P    +R V E+L E+
Sbjct: 643 QSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEE 702

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G ++    +  +M + G   N  ++  ++  LL RG +  A
Sbjct: 703 GSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 152/643 (23%), Positives = 272/643 (42%), Gaps = 53/643 (8%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DI 116
           T+  +I    R+G L H       + K G + D      L++       V E++ +    
Sbjct: 92  TYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQR 151

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTYNVMLWGFFL 173
           M +LG      SY  L K +    R   A    + M  +      P   +Y++++ GFF 
Sbjct: 152 MPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFT 211

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
             +++     F +M  RGI  DVVTY T+I+G  + +  D AE +F +M +   +P   +
Sbjct: 212 EGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYT 271

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y  +I GY+++ +  + +++ +EM +  +KP+  TY +LL  LC  G+  E +     M+
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
            + I PK ++  + + G   K G L+     L  M+   +  +   + I    + K  M 
Sbjct: 332 RKGIKPKVSTYGILIHGYATK-GALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMI 390

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           D+A+ + +K+         Q  L     +Y  +I  LC  G+   AE+ F Q++ +GV  
Sbjct: 391 DKAMDIFNKM--------RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTP 442

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIM---------------------------GRR-- 443
           + V FN+L+ G       + A E+V  M                           GRR  
Sbjct: 443 NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI 502

Query: 444 ------GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
                 GV  DA +Y  LI  Y   G   +A+   D M+  G SP    + +++      
Sbjct: 503 DLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 562

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNF 554
            R+  A  + + M+ KGV   +     IL  L       EA      M+ SG+   +  +
Sbjct: 563 SRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTY 622

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
           + +L+ L +      A K+      +   +++ ++  ++ ALL  G+  +A  +   I  
Sbjct: 623 NIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPA 682

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGEMSRGSQ 656
            G V +  +   +   L +EG+ ++ D + S M +   +  SQ
Sbjct: 683 NGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 725



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 221/504 (43%), Gaps = 22/504 (4%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L P  + +  + N L        A  FF  + R G+      T+  +I      G L+
Sbjct: 298 RGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGI-KPKVSTYGILIHGYATKGALS 356

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
                L  M + G+  D  +F +   +Y K G++ +++ IF+ M+Q G+  +V +Y AL 
Sbjct: 357 EMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALI 416

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + GR   A+  FN+M++EG+ P    +N +++G     K E A     +M  +GI 
Sbjct: 417 DALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC 476

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            + V +NT+I       ++ E  +L   M+   + P   SYT +I GY    R D+A ++
Sbjct: 477 PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKV 536

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP---KDNSVFMKLLG 310
           FD M S  + P  VTY  LL G C A ++ +   + REM+ + + P     N++   L  
Sbjct: 537 FDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF- 595

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
              ++   + A ++   MI      +   Y I++   CK+   D A K+   L  K    
Sbjct: 596 ---QTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSK---- 648

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGH-SKEGN 429
                L +   ++  MI  L   G+   A   F  +   G++  V    L+  +  +EG+
Sbjct: 649 ----GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 704

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            +    +   M + G   ++     L+   L +G+ + A   L  + E   S  +S   S
Sbjct: 705 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST-TS 763

Query: 490 VMESLFEDGRVQTASRVMKSMVEK 513
           ++ S+F     Q  +   KS+ EK
Sbjct: 764 LLMSIFTSDEYQHHA---KSLPEK 784



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 93/431 (21%), Positives = 175/431 (40%), Gaps = 54/431 (12%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGL----CDAGKMVEV---QKVLREMVERYIPPK 300
           DDAL++FDE+       +   +  LL  +    C +   + V    +++RE  ++  P  
Sbjct: 31  DDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAP-- 88

Query: 301 DNSVFMKLLGVQCKSGHL-----------------------------------NAAADV- 324
           +   +  L+G  C+ GHL                                     A DV 
Sbjct: 89  NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L+ M  L    +   Y IL++  C  +  + A++LL  + +      P + +     SY+
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVV-----SYS 203

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I      GQ  K    F +++ +G+  D V +  +I G  K    D A  + + M   
Sbjct: 204 IVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN 263

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   +   Y CLI  YL  G+  +    L+ M   G  P    + S++  L ++GR + A
Sbjct: 264 GFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREA 323

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
                SM+ KG+K  +     ++     +G + E    +DLM+++G  P+   F+   S 
Sbjct: 324 RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSA 383

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
            ++ G    A+ + +         ++ +Y  ++DAL   G+  +A     +++ +G   +
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 443

Query: 621 WKSSDKLIAGL 631
               + L+ GL
Sbjct: 444 IVVFNSLVYGL 454


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/534 (23%), Positives = 255/534 (47%), Gaps = 23/534 (4%)

Query: 51  LFNHDRETHL--------KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYG 102
           LF+    TH+        K++  L + G +  A  +L  + ++G+  +   + + I    
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           + G + E+V++ D M+   V   V +Y+ L + + ++     A  Y  +M+++G  P   
Sbjct: 234 EAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           TYN ++ G+     ++ A    +D   +G   D VTY ++ING      ++ A +LF E 
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           + K I+P ++ Y +++KG         AL++ +EM      P+  TY  ++ GLC  G +
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 283 VEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
            +   V+ + + + Y+P  D   F  L+   CK   L++A  +++ M    I  +   Y 
Sbjct: 413 SDATVVMNDAIMKGYLP--DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 470

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            ++   CKA   +   +   +++ K     P         +YN +I++ C + +  +A  
Sbjct: 471 SVLNGLCKAGKVNEVNETFQEMILKGCHPNP--------ITYNILIENFCRSNKMEEASK 522

Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
              ++ ++G+  D V+FN LI G  + G+ + A+ + + +  +G    AD +  LI ++ 
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 582

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
            K     A+   D M+  GH   S  +R +++   +   V  A   +  M++KG   ++ 
Sbjct: 583 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 642

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
              +++ +L +   V +A+G I +M++ G VP  + + ++L+   K IAA K+L
Sbjct: 643 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP--EVVDTILNADKKEIAAPKIL 694



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 133/615 (21%), Positives = 248/615 (40%), Gaps = 74/615 (12%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++   I +Y + G ++++V  F+ M       +  +Y+A+   ++    +  A + + +M
Sbjct: 53  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L+ G+ P  HT+ + L  F L+ +   A+R    +  RG     V Y T++ G       
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT 168

Query: 213 DEAEKLFAEMKEKNIEP-----------------------------------TVISYTTM 237
            +A +LF +M   ++ P                                    + +Y   
Sbjct: 169 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I+G     R  +A+R+ D M+++ V P+ VTY  L+ GLC      E    LR M+ +  
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLK-AMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
            P D+  +  ++   CK   +  A ++LK A+ +  +P +   Y  LI   C     +RA
Sbjct: 288 LP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVT-YCSLINGLCAEGDVERA 345

Query: 357 IKLLDKLVEKEI-------------------ILRPQSTLDMEA--------SSYNPMIQH 389
           ++L ++   K I                   IL     ++  A         +YN +I  
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405

Query: 390 LCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC  G    A +     + KG L D   FN LI G+ K    DSA ++V+ M   G+  D
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 465

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  ++    + G+  +       MI  G  P    +  ++E+     +++ AS+V+ 
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 525

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKG 565
            M ++G+  +      ++      G +E A     +++    S +   F++L+   S K 
Sbjct: 526 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 585

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
               A K+ D  L +    D  +Y  ++D          AY  L ++++KG +    +  
Sbjct: 586 NMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFG 645

Query: 626 KLIAGLNQEGNTKQA 640
           ++I  L       QA
Sbjct: 646 RVINSLTVNHRVFQA 660



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 226/521 (43%), Gaps = 24/521 (4%)

Query: 9   RLQNKIRAL-VPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL 66
           RL + +RA  VP    +N +   L      + A+ + R +   G    D  T+  +I+  
Sbjct: 243 RLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF-TYNTIIDGY 301

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
            ++  +  A  +L D   KG   D+  +  LI     +G V+ ++++F+  +  G++  +
Sbjct: 302 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 361

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
             Y++L K +  +G  + A +  N+M  EG  P   TYN+++ G      +  A     D
Sbjct: 362 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND 421

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
              +G   DV T+NT+I+GY +  K+D A +L   M E  I P  I+Y +++ G     +
Sbjct: 422 AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 481

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            ++    F EM      PN +TY  L+   C + KM E  KV+ +M +  + P D   F 
Sbjct: 482 VNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP-DAVSFN 540

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+   C++G L  A  + + +        A  +  LI  F        A K+ D+++ K
Sbjct: 541 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 600

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHS 425
                       ++ +Y  +I   C      +A +   +++KKG +  ++ F  +I   +
Sbjct: 601 --------GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652

Query: 426 KEGNPDSAFEIVKIMGRRG-VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH--SP 482
                  A  I+ IM + G VP   D  +        K E A  K  ++ +++ GH   P
Sbjct: 653 VNHRVFQAVGIIHIMVKIGVVPEVVDTIL-----NADKKEIAAPKILVEDLMKKGHISYP 707

Query: 483 ASSLFRSVMES---LFEDGRVQTASRVMKSMVEKGVKENLD 520
              +    ++S     E G+ + +    +   E  V+ N+D
Sbjct: 708 TYEVLHEGVQSTIYCLEYGKQRASDPKCRKTTEGCVEINVD 748



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 105/521 (20%), Positives = 212/521 (40%), Gaps = 52/521 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT-YNVMLWGFFLSLKLETAIRF 183
           +V +Y AL + +   GR            S     T H  Y   +  +  + +L  A+  
Sbjct: 14  TVPAYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDA 73

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           FE M           YN +++        D+A K++  M    + P + ++T  ++ +  
Sbjct: 74  FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 133

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             R   ALR+   +        AV Y  ++ GL   G   + +++  +M+  ++ P + +
Sbjct: 134 TARPHIALRLLRALP----HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFP-NLA 188

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            F K+L   CK G      DVL+A +                             LL K+
Sbjct: 189 AFNKVLHALCKRG------DVLEAGL-----------------------------LLGKV 213

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRG 423
           +        Q  + +   +YN  I+ LC  G+  +A      +    V D V +N LIRG
Sbjct: 214 I--------QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRG 265

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K+  P  A   ++ M  +G   D   Y  +I+ Y +     +A   L   +  G  P 
Sbjct: 266 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 325

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + S++  L  +G V+ A  +      KG+K ++ +   +++ L ++G +  AL  ++
Sbjct: 326 QVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 385

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M + G  P+   ++ +++ L + G    A  +++  + +  + D+ ++  ++D      
Sbjct: 386 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 445

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           K  +A  ++ ++ E G   D  + + ++ GL + G   + +
Sbjct: 446 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 486



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/420 (20%), Positives = 166/420 (39%), Gaps = 49/420 (11%)

Query: 227 IEPTVIS--YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
           + P  I   Y   I+ Y    R  DA+  F+ M  F   P A  Y A++  L DA    +
Sbjct: 45  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 104

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             KV   M+   + P  ++  ++L    C +   + A  +L+A+          +  ++ 
Sbjct: 105 AHKVYVRMLAAGVSPDLHTHTIRLRSF-CLTARPHIALRLLRALPHRG---AVAYCTVVC 160

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             +     +D A +L D+++   +            +++N ++  LC  G   +A +   
Sbjct: 161 GLYAHGHTHD-ARQLFDQMLHTHVF--------PNLAAFNKVLHALCKRGDVLEAGLLLG 211

Query: 405 QLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++++G+ ++   +N  IRG  + G    A  +V  M    VP D   Y  LI    +K 
Sbjct: 212 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKS 270

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
            P +A   L  M+  G  P    + ++++   +   VQ A+ ++K  V KG   +     
Sbjct: 271 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 330

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
            ++  L   G VE AL   +     G  P                               
Sbjct: 331 SLINGLCAEGDVERALELFNEAQAKGIKP------------------------------- 359

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            D+  Y  ++  L   G  L+A  ++ ++ E+G   D ++ + +I GL + GN   A ++
Sbjct: 360 -DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 148/632 (23%), Positives = 279/632 (44%), Gaps = 70/632 (11%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R+G + +A  ++ ++   GV  D      LI+ Y + G++ ++ ++ +   +  V+  + 
Sbjct: 209 RIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIV 268

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLS-------------------EGIEPTRHTYNVML 168
           +Y+ L K   + G    A+  FN++L                    + ++PT  TY  ++
Sbjct: 269 TYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLI 328

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
             +   + +E +   ++ M   GI  DVVT ++++ G+ R  K+ EA  LF EM E  ++
Sbjct: 329 AAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLD 388

Query: 229 PTVISY-----------------------------------TTMIKGYVAVERADDALRI 253
           P  +SY                                   TT++ G   V +  +A  +
Sbjct: 389 PNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEV 448

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F+ +   ++ PN VTY+ALL G C  GKM   + VL++M + ++PP +   F  ++    
Sbjct: 449 FETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP-NVITFSSIINGYA 507

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G L+ A DVL+ M++ ++      Y ILI+ + KA   D A     ++  +       
Sbjct: 508 KKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR------ 561

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPD 431
             L+     ++ ++ +L   G+  +A      +  KG+ DP  V + +LI G+ KEGN  
Sbjct: 562 --LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI-DPDIVNYASLIDGYFKEGNQL 618

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           +A  IV+ M  + +  D  AY  LI+  LR G+  D +     MIE G +P    + +++
Sbjct: 619 AALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDCITYNTII 677

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
            +    G+ + A  ++  M   G+  N      ++  L   G VE+A   +D M+    V
Sbjct: 678 NTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFV 737

Query: 552 P---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P       L+   S   K    +++ +  +     + L  Y  ++      G T  A  +
Sbjct: 738 PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVV 797

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           L +++++G   D  + + LI G     + ++A
Sbjct: 798 LDEMVKRGISADLVTYNALIRGYCTGSHVEKA 829



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 122/531 (22%), Positives = 228/531 (42%), Gaps = 34/531 (6%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +++ L +VGK   A  +   + K  +  +   +  L++ Y K G ++ +  + 
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M++  V  +V ++ ++     ++G    A     +M+   + P    Y +++ G+F +
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + + A  F ++MKSR +    V ++ ++N   R  +MDEA  L  +M  K I+P +++Y
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 604

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            ++I GY        AL I  EMK  +++ + V Y AL+ GL   GK  + + V   M+E
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIE 663

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D   +  ++   C  G    A D+L  M    I   A  Y ILI   CK    +
Sbjct: 664 LGLAP-DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVE 722

Query: 355 RAIKLLDKLVEKEIILRP---------------------------QSTLDMEASSYNPMI 387
           +A   LD+++  E +  P                            S L++  + YN +I
Sbjct: 723 KAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLI 782

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
              C  G T KA++   +++K+G+  D V +N LIRG+    + + A +    M   G+ 
Sbjct: 783 TVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIA 842

Query: 447 RDADAYICLIESYLRKG----EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            +   Y  L+      G       + +  +  M E G  P ++ +  ++      G  + 
Sbjct: 843 PNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKK 902

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
              +   M+ KG    L     ++      G + EA   ++ ++  G +PN
Sbjct: 903 TIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPN 953



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 130/606 (21%), Positives = 271/606 (44%), Gaps = 41/606 (6%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L +VG L+ A   L +     V  D   +  +I  + +KG+V +   +   M + G
Sbjct: 135 LVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRG 192

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +     + + L K   R G    A+     ++  G+       N ++ G+  +  +  A 
Sbjct: 193 LCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQAT 252

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM------------------- 222
              E+     + +D+VTYNT++  + +   +  AE LF E+                   
Sbjct: 253 ELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQN 312

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           + KN++PT+++YTT+I  Y      +++  ++ +M    + P+ VT +++L G C  GK+
Sbjct: 313 EIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKL 372

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E   + REM E  + P   S +  ++    KSG +  A ++   M+   I  +      
Sbjct: 373 TEAAVLFREMYEMGLDPNHVS-YATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTT 431

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           +++   K      A ++ + ++  ++ L P         +Y+ ++   C  G+   AE+ 
Sbjct: 432 VMDGLFKVGKTKEAEEVFETIL--KLNLAPNCV------TYSALLDGYCKLGKMELAELV 483

Query: 403 FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
            +++ K+ V  + + F+++I G++K+G    A ++++ M +R V  +   Y  LI+ Y +
Sbjct: 484 LQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFK 543

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
            GE   A      M       ++ +F  ++ +L   GR+  A  ++  M  KG+  ++  
Sbjct: 544 AGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVN 603

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKT---IAAVKLLD 575
            A +++     G+   AL  +  M +      V  +++L+  L   GK        ++++
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE 663

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             L  DCI    +Y  +++     GKT +A  IL ++   G + +  + + LI GL + G
Sbjct: 664 LGLAPDCI----TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719

Query: 636 NTKQAD 641
             ++A+
Sbjct: 720 AVEKAE 725



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 130/601 (21%), Positives = 254/601 (42%), Gaps = 51/601 (8%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G+  D      ++  + + G + E+  +F  M ++G++ +  SY  +   + + GR
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            M A    ++M+  GI     T   ++ G F   K + A   FE +    ++ + VTY+ 
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 466

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++GY +  KM+ AE +  +M+++++ P VI+++++I GY        A+ +  EM   +
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V PN + Y  L+ G   AG+        +EM  R +  + N +F  LL    + G ++ A
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRL-EESNVIFDILLNNLKRVGRMDEA 585

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             ++  M    I  +  +Y  LI+ + K      A+ ++ ++ EK I          +  
Sbjct: 586 RSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI--------RFDVV 637

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           +YN +I+ L   G+     +  R +      D + +N +I  +  +G  + A +I+  M 
Sbjct: 638 AYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMK 697

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSM-------------------------- 475
             G+  +A  Y  LI    + G    A++ALD M                          
Sbjct: 698 SYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKAD 757

Query: 476 ---------IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
                    +  G   + +++ +++      G  + A  V+  MV++G+  +L     ++
Sbjct: 758 KILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALI 817

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG----KTIAAVKLLDFCLG 579
                  HVE+AL     M   G  PN   +++LL  LS  G          KL+     
Sbjct: 818 RGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE 877

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
           R  + + A+Y+ ++      G       +  +++ KG V   K+ + LI+   + G   +
Sbjct: 878 RGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIE 937

Query: 640 A 640
           A
Sbjct: 938 A 938



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 136/652 (20%), Positives = 259/652 (39%), Gaps = 74/652 (11%)

Query: 42  FFRWVERAGLFNHDRETHL------KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           F   + +  +F    +THL       +I +     + + A      M   G+      + 
Sbjct: 39  FSSQIHKDSIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWN 98

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            L+  +   G+V +   ++  M   GV   V S + L   + + G   +A  Y     ++
Sbjct: 99  TLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--ND 156

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            ++    TYN ++WGF     ++       +M  RG+  D +T N ++ GY R   +  A
Sbjct: 157 VVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYA 216

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           E +   + +  +   VI   T+I GY        A  + +     DVK + VTY  LL  
Sbjct: 217 EWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKA 276

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            C  G +   +                S+F ++LG       L     V +  I+   PT
Sbjct: 277 FCKTGDLTRAE----------------SLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPT 320

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  LI  +CK    + +  L  K++   I+  P      +  + + ++   C +G+
Sbjct: 321 LV-TYTTLIAAYCKFVGVEESHSLYKKMIMNGIM--P------DVVTCSSILYGFCRHGK 371

Query: 396 TGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
             +A + FR++ + G LDP  V++  +I    K G    AF +   M  RG+  D     
Sbjct: 372 LTEAAVLFREMYEMG-LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCT 430

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            +++   + G+  +A+   +++++   +P    + ++++   + G+++ A  V++ M ++
Sbjct: 431 TVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE 490

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-------------------- 553
            V  N+   + I+     +G + +A+  +  M+Q   +PN                    
Sbjct: 491 HVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVA 550

Query: 554 ------------------FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
                             FD LL+ L   G+   A  L+     +    D+ +Y  ++D 
Sbjct: 551 DDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG 610

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
               G  L A SI+ ++ EK    D  + + LI GL + G      + SRMI
Sbjct: 611 YFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMI 662


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 158/664 (23%), Positives = 295/664 (44%), Gaps = 66/664 (9%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
           VL   ++ + A  FF+W      F H+  T   ++    +  +   A  +L +  +    
Sbjct: 49  VLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCF 108

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            +E M+  +I  + K G V ++ ++ D MK+ GV+  V  +  L + + R+GR   A   
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQ 168

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR-----GISLDVVTYNTMI 203
           F  M  E   P   TYN ++ G   + +++ A+  F+DM+ R     G   DV++Y+T+I
Sbjct: 169 FKSM-GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVI 227

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM--KSFD 261
           +   + +++D+A + F  M+     P V++Y+++I G   V+R  + L +   M  K F 
Sbjct: 228 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG 287

Query: 262 V---------------------------------KPNAVTYTALLPGLCDAGKMVEVQKV 288
           +                                 KPN VTY   + GLC AG++ E  ++
Sbjct: 288 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRI 347

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL-KAMIRLSIPTEAGHYGILIENF 347
           L EMVE  + P D   +  ++   CK+G ++ A DV  + M+   IP     +  L+  F
Sbjct: 348 LLEMVESKVTP-DVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVT-FMTLLHGF 405

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQL 406
            + +    A ++ + +V    I   Q        +YN ++  +C       A EI+ +  
Sbjct: 406 SEHKKSREAFRVHEDMVNAGFIPGLQ--------TYNVLMDCVCGADSVESALEIYHKMK 457

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
            KK   D   +  LI+   +    D A E + +M    V  +      L+E   ++GE  
Sbjct: 458 RKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVD 517

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS--MVEKGVKENLDLVAK 524
           +A + LD+++E G  P    F+ ++E L+   + + AS++++S   V      +L  VA+
Sbjct: 518 EACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSL-CVAE 576

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           I +A    G  +EA+  I+ M+  G  P+   + ++L  L    +  +A+   +    R 
Sbjct: 577 ICKA----GKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRG 632

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           C   L +Y  ++    +A     A+ I F+ M   G T    + + ++   ++   +  D
Sbjct: 633 CAPGLVTYTLLIGEACSADMADEAFRI-FEAMVAAGFTPQAQTMRTLSSCLRDAGYQ--D 689

Query: 642 ILSR 645
           +L R
Sbjct: 690 LLVR 693



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/496 (21%), Positives = 217/496 (43%), Gaps = 15/496 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE----THLKMIEILGRVGKLNHARCI 78
           +N V N L  A   + AL+ F  +E+    +H  E    ++  +I+ L +  +++ A   
Sbjct: 183 YNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEY 242

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
              M   G   +   +  LI+   K     E +++   MK+ G   ++  ++A+   + +
Sbjct: 243 FKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWK 302

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
                 A ++F ++L  G +P   TYNV + G   + +++ A R   +M    ++ DV+T
Sbjct: 303 NDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVIT 362

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y+++I+G+ +  +MD+A+ +F  M      P  +++ T++ G+   +++ +A R+ ++M 
Sbjct: 363 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 422

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           +    P   TY  L+  +C A  +    ++  +M  +   P D + +  L+   C++  +
Sbjct: 423 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQP-DCNTYAPLIQCLCRARRV 481

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A + L  M   ++         L+E  CK    D A  +LD +V  E+  +P      
Sbjct: 482 DEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV--EVGCQPL----- 534

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              ++  +++ L    +   A    R      V D   ++  +    K G PD A E+++
Sbjct: 535 -GETFKILVEELYLRKKWEAASKLLRS--PGFVADAATYSLCVAEICKAGKPDEAVEVIE 591

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  +GV  D   Y+ ++ S         A    + M   G +P    +  ++       
Sbjct: 592 QMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSAD 651

Query: 499 RVQTASRVMKSMVEKG 514
               A R+ ++MV  G
Sbjct: 652 MADEAFRIFEAMVAAG 667


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/550 (23%), Positives = 249/550 (45%), Gaps = 16/550 (2%)

Query: 28  NVLHGA-KNSE--HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
            V+HG  K  E   A   F  + + G+   D  T+  +++ L +   ++ A  +L  M  
Sbjct: 237 TVIHGFFKQGEVSKACNLFNEMVQKGVVP-DVGTYNSIVDALCKARAMDKAEFVLRQMVD 295

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           KGV+ D   +  +I  Y   G  +ES K+F  M   G+     ++ +    + + GR   
Sbjct: 296 KGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKD 355

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A+  F  M ++G  P   +Y+++L G+    +       F  M  +GI  +    N +I+
Sbjct: 356 AEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILIS 415

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            + +   MDEA  +F EM+ + + P V++Y+T+I  +  + R  DA+  F +M S  ++P
Sbjct: 416 AHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEP 475

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N   Y +L+ G C  G +V+ ++ + EM+ + +   +   F  ++   C  G +  A DV
Sbjct: 476 NTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDV 535

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              +I +        +  LI+ +C     ++A  +LD +V   I        + +  + N
Sbjct: 536 FNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGI--------EPDVVTNN 587

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            ++   C +G+     I FR+++ K V    V +N ++ G  + G   +A ++   M   
Sbjct: 588 TLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDS 647

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   D D Y  L++   R     +A T    +         ++  +++ +L++  R + A
Sbjct: 648 GTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEA 707

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
           + +  ++   G+  N+     ++  LL  G VEEA      M +SG  P+    + ++ +
Sbjct: 708 NDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRM 767

Query: 561 LSEKGKTIAA 570
           L +KG  + A
Sbjct: 768 LLQKGDIVKA 777



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/565 (22%), Positives = 237/565 (41%), Gaps = 43/565 (7%)

Query: 82  MPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
           M K+G +   D+  F  +I  + K+G V ++  +F+ M Q GV   V +Y+++   + + 
Sbjct: 221 MAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKA 280

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                A+    +M+ +G+EP   TYN ++ G+  S   + + + F  M S+G+  D VT+
Sbjct: 281 RAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTF 340

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           ++ ++   +  +  +AE++F  M  K   P ++SY+ ++ GY    R  D   +F  M  
Sbjct: 341 SSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMAD 400

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             +  N      L+      G M E   V  EM  + + P +   +  L+   C+ G L 
Sbjct: 401 KGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRP-NVVTYSTLISAFCRMGRLA 459

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A +    MI + I      Y  LI  FC      +A + + +++ K +  RP       
Sbjct: 460 DAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGL-HRPNIVF--- 515

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVK 438
              ++ +I  LC  G+   A+  F  ++  G     V FN+LI G+   G  + AF ++ 
Sbjct: 516 ---FSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 572

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G+  D      L+  Y + G+  D       M+     P +  +  V++ L   G
Sbjct: 573 AMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAG 632

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL 558
           R   A ++   M++ G   ++D    +L+ L      +EA   I L  + G++       
Sbjct: 633 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA---ITLFHKLGAM------- 682

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
                                 DC  D+     +++AL    +   A  +   I   G V
Sbjct: 683 ----------------------DCKFDITILNTMINALYKVRRREEANDLFAAISTSGLV 720

Query: 619 TDWKSSDKLIAGLNQEGNTKQADIL 643
            +  +   +I  L +EG+ ++AD +
Sbjct: 721 PNVSTYGVMIRNLLKEGSVEEADTM 745



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 214/498 (42%), Gaps = 28/498 (5%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG--ISLDVVTYNTMINGYNRFKKMDEAE 216
           P   +YN ++       + + A+   + M   G   S DVV++NT+I+G+ +  ++ +A 
Sbjct: 193 PDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKAC 252

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            LF EM +K + P V +Y +++         D A  +  +M    V+P+ VTY A++ G 
Sbjct: 253 NLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGY 312

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
             +G   E  K+ R+M  + + P D   F   +   CK G    A ++ + M      T 
Sbjct: 313 SCSGHWKESAKMFRKMTSKGLIP-DTVTFSSFMSSLCKHGRSKDAEEIFQYM------TT 365

Query: 337 AGH------YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
            GH      Y IL+  +     +     L   + +K I+              N +I   
Sbjct: 366 KGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIV--------SNCHCINILISAH 417

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              G   +A + F ++  +GV  + V ++ LI    + G    A E    M   G+  + 
Sbjct: 418 AKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNT 477

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDG-HSPASSLFRSVMESLFEDGRVQTASRVMK 508
             Y  LI  +   G+   AK  +  M+  G H P    F S++ SL  +GRV  A  V  
Sbjct: 478 AVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFN 537

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKG 565
            ++  G +  +     +++   + G +E+A G +D M+  G  P+    ++L+S   + G
Sbjct: 538 LVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSG 597

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           K    + L    L +       +Y  VLD LL AG+T  A  +  ++++ G   D  +  
Sbjct: 598 KIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYK 657

Query: 626 KLIAGLNQEGNTKQADIL 643
            L+ GL +   T +A  L
Sbjct: 658 ILLKGLCRNDLTDEAITL 675



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 105/505 (20%), Positives = 206/505 (40%), Gaps = 54/505 (10%)

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           E+   R   L V TY  +++   R ++ D      A +    ++   I  TT +K     
Sbjct: 113 EEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHA 172

Query: 245 ERADDALRIF-DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE---RYIPPK 300
           +R D+A+ +    M      P+A++Y  ++  LC   +  E   +++ M +   R  P  
Sbjct: 173 KRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSP-- 230

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  ++    K G ++ A ++   M++  +  + G Y  +++  CKA   D+A  +L
Sbjct: 231 DVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVL 290

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
            ++V+K +        + +  +YN +I     +G   ++   FR++  KG++ D V F++
Sbjct: 291 RQMVDKGV--------EPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSS 342

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            +    K G    A EI + M  +G   D  +Y  L+  Y  +G  AD      SM + G
Sbjct: 343 FMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKG 402

Query: 480 --------------HS---------------------PASSLFRSVMESLFEDGRVQTAS 504
                         H+                     P    + +++ +    GR+  A 
Sbjct: 403 IVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAM 462

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-SVPN---FDSLLSV 560
                M+  G++ N  +   ++    M G + +A   I  MM  G   PN   F S++  
Sbjct: 463 EKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHS 522

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L  +G+ + A  + +  +       + ++  ++D     GK   A+ +L  ++  G   D
Sbjct: 523 LCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 582

Query: 621 WKSSDKLIAGLNQEGNTKQADILSR 645
             +++ L++G  + G      IL R
Sbjct: 583 VVTNNTLVSGYCKSGKIDDGLILFR 607



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/327 (20%), Positives = 154/327 (47%), Gaps = 15/327 (4%)

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
           P     YGIL++  C+A   D     + +L+   +      T  ++A+++   ++ LCH 
Sbjct: 121 PLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGL-----KTGTIQATTF---LKCLCHA 172

Query: 394 GQTGKA-EIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG--VPRDA 449
            +T +A ++   ++ +   V D +++N +I+    +     A ++V+ M + G     D 
Sbjct: 173 KRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDV 232

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
            ++  +I  + ++GE + A    + M++ G  P    + S++++L +   +  A  V++ 
Sbjct: 233 VSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQ 292

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           MV+KGV+ +      I+      GH +E+      M   G +P+   F S +S L + G+
Sbjct: 293 MVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGR 352

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
           +  A ++  +   +  + D+ SY  +L      G+  +  ++   + +KG V++    + 
Sbjct: 353 SKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINI 412

Query: 627 LIAGLNQEGNTKQADILSRMIRGEMSR 653
           LI+   + G   +A ++   ++G+  R
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVR 439



 Score = 45.8 bits (107), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 37/185 (20%)

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA--KILEAL 529
           L  M E    P +  + +V++SL  D R Q A  +++ M ++G + + D+V+   ++   
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242

Query: 530 LMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
             +G V +A    + M+Q G VP                                D+ +Y
Sbjct: 243 FKQGEVSKACNLFNEMVQKGVVP--------------------------------DVGTY 270

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
             ++DAL  A     A  +L ++++KG   D  + + +I G +  G+ K++   ++M R 
Sbjct: 271 NSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKES---AKMFRK 327

Query: 650 EMSRG 654
             S+G
Sbjct: 328 MTSKG 332


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 148/627 (23%), Positives = 279/627 (44%), Gaps = 36/627 (5%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  +L   KN   AL  F  V R   ++H       +++ L     + HA      MP +
Sbjct: 13  VIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYA-KNSMPDQ 71

Query: 86  GVQWDEDMFEVL-----IESYGK--KGIVQ-----ESVKIFDIMKQLGVERSVKSYDALF 133
            +   + M E+      I SY      +++     E+   F   + +G+  ++++Y+ L 
Sbjct: 72  ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILI 131

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           K+  R+ ++  AK   N M  +G  P   +Y  ++     +  +  A++ F++M  RG++
Sbjct: 132 KISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT 191

Query: 194 LDVVTYNTMINGYNRFKKMD--EAEKLFAE-MKEKNIEPTVISYTTMIKGYVAVERADDA 250
            DV  YN +I+G+  FKK D   A +++   +K  ++ P + SY  MI G     + D++
Sbjct: 192 PDVACYNILIDGF--FKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 249

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
             I+  MK  +   +  TY+ L+ GLC +G +    +V +EM E  + P D  V+  +L 
Sbjct: 250 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP-DVVVYNTMLN 308

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
              ++G +    ++ K M +    T    Y ILI    +    D AI + + L EK+   
Sbjct: 309 GYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAISIWELLPEKDCC- 366

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGN 429
                   ++ +Y  ++  LC NG   KA  I       +G LD  A++++I G  +EG 
Sbjct: 367 -------ADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 419

Query: 430 PDSAFEIVKIMGRRGVPRDADAYIC--LIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
            D    ++  M + G     + Y+C  +I  ++R  +  DA     +M+  G  P    +
Sbjct: 420 LDEVAGVLDQMTKHGC--KPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 477

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            +++  L +  R   A  ++K M++KG K N+   + ++  L     ++ AL      ++
Sbjct: 478 NTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 537

Query: 548 SGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  P+    + ++  L   GK   A++L      R+C+ +L ++  +++          
Sbjct: 538 KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFER 597

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGL 631
           A  I   I++ G   D  S +  + GL
Sbjct: 598 ASKIWDHILQYGLQPDIISYNITLKGL 624



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/532 (21%), Positives = 246/532 (46%), Gaps = 13/532 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++  +    K  + A +   W+   G F+ D  ++  +I  L + G ++ A  +  +M
Sbjct: 127 YNILIKISCRKKQFDKAKELLNWMWGQG-FSPDVFSYGTLINSLAKNGYMSDALKLFDEM 185

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD-IMKQLGVERSVKSYDALFKLILRRGR 141
           P++GV  D   + +LI+ + KKG +  + +I++ ++K   V  ++ SY+ +   + + G+
Sbjct: 186 PERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 245

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  +   +++M         +TY+ ++ G   S  L+ A R +++M   G+S DVV YNT
Sbjct: 246 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 305

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           M+NGY R  +++E  +L+  M+++    TV+SY  +I+G     + D+A+ I++ +   D
Sbjct: 306 MLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKD 364

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
              +++TY  L+ GLC  G + +   +L E  E      D   +  ++   C+ G L+  
Sbjct: 365 CCADSMTYGVLVHGLCKNGYLNKALSILEE-AENGRGDLDTFAYSSMINGLCREGRLDEV 423

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
           A VL  M +            +I  F +A   + A++    +V K               
Sbjct: 424 AGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCF--------PTVV 475

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +I  L    +  +A    +++++KG   + + ++ L+ G  +    D A  +    
Sbjct: 476 TYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 535

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G   D   +  +I      G+  DA      M +    P      ++ME  ++    
Sbjct: 536 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDF 595

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
           + AS++   +++ G++ ++      L+ L     + +A+G ++  +  G +P
Sbjct: 596 ERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLP 647



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 215/490 (43%), Gaps = 15/490 (3%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G +P   +YN +L     S K + A  FF   ++ G+S ++ TYN +I    R K+ D+A
Sbjct: 84  GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           ++L   M  +   P V SY T+I          DAL++FDEM    V P+   Y  L+ G
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 203

Query: 276 LCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
               G ++   ++   +++   + P   S  + + G+ CK G  + + ++   M +    
Sbjct: 204 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL-CKCGKFDESFEIWHRMKKNERG 262

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   Y  LI   C +   D A ++  ++ E  +          +   YN M+      G
Sbjct: 263 QDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV--------SPDVVVYNTMLNGYLRAG 314

Query: 395 QTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
           +  +    ++ + K+G    V++N LIRG  +    D A  I +++  +    D+  Y  
Sbjct: 315 RIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 374

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSL-FRSVMESLFEDGRVQTASRVMKSMVEK 513
           L+    + G    A + L+   E+G     +  + S++  L  +GR+   + V+  M + 
Sbjct: 375 LVHGLCKNGYLNKALSILEEA-ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 433

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAA 570
           G K N  +   ++   +    +E+AL     M+  G  P    +++L++ LS+  +   A
Sbjct: 434 GCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 493

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             L+   L +    ++ +Y  +++ L    K   A ++  + +EKG   D K  + +I G
Sbjct: 494 YALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 553

Query: 631 LNQEGNTKQA 640
           L   G  + A
Sbjct: 554 LCSSGKVEDA 563



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 187/439 (42%), Gaps = 49/439 (11%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
            D  T+  +I  L   G L+ A  +  +M + GV  D  ++  ++  Y + G ++E +++
Sbjct: 263 QDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL 322

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRY----------------------------MMA 145
           + +M++ G  R+V SY+ L + +    +                             +  
Sbjct: 323 WKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCK 381

Query: 146 KRYFNKMLS--EGIEPTR-----HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             Y NK LS  E  E  R       Y+ M+ G     +L+      + M   G   +   
Sbjct: 382 NGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYV 441

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
            N +ING+ R  K+++A + F  M  K   PTV++Y T+I G    ER  +A  +  EM 
Sbjct: 442 CNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEML 501

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
               KPN +TY+ L+ GLC   K+     +  + +E+   P D  +   ++   C SG +
Sbjct: 502 QKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKP-DVKMHNIIIHGLCSSGKV 560

Query: 319 NAAADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             A  +   M  R  +P    H   L+E F K   ++RA K+ D ++        Q  L 
Sbjct: 561 EDALQLYSEMKQRNCVPNLVTH-NTLMEGFYKVRDFERASKIWDHIL--------QYGLQ 611

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH-SKEGNPDSAFE 435
            +  SYN  ++ LC   +   A  F    + +GVL   + +N L++G+ + +G  +  F 
Sbjct: 612 PDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFV 671

Query: 436 IVKIMGRRGVPRDADAYIC 454
              + G  G+      ++C
Sbjct: 672 PASMKGNPGMQMRYFGFVC 690



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 149/292 (51%), Gaps = 6/292 (2%)

Query: 14  IRALVPQFD---HNLVYNVL-HGAKNSEHALQFFRWVERA--GLFNHDRETHLKMIEILG 67
           I  L+P+ D    ++ Y VL HG   + +  +    +E A  G  + D   +  MI  L 
Sbjct: 356 IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 415

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R G+L+    +L  M K G + +  +   +I  + +   ++++++ F  M   G   +V 
Sbjct: 416 REGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 475

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L   + +  R+  A     +ML +G +P   TY++++ G     KL+ A+  +   
Sbjct: 476 TYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 535

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
             +G   DV  +N +I+G     K+++A +L++EMK++N  P ++++ T+++G+  V   
Sbjct: 536 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDF 595

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           + A +I+D +  + ++P+ ++Y   L GLC   ++ +    L + V+R + P
Sbjct: 596 ERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLP 647



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/224 (20%), Positives = 106/224 (47%), Gaps = 5/224 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N V N    A   E AL+FF  +   G F     T+  +I  L +  + + A  ++ +M 
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCF-PTVVTYNTLINGLSKAERFSEAYALVKEML 501

Query: 84  KKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           +KG  W  +M  + +L+    +   +  ++ ++    + G +  VK ++ +   +   G+
Sbjct: 502 QKG--WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 559

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A + +++M      P   T+N ++ GF+     E A + ++ +   G+  D+++YN 
Sbjct: 560 VEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNI 619

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            + G     ++ +A     +  ++ + PT I++  +++GY+A++
Sbjct: 620 TLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALK 663


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 236/516 (45%), Gaps = 11/516 (2%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D +  ++ +   K     L F + +E  G+  H+  T   MI    R  K   
Sbjct: 60  RPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGI-AHNIYTLNIMINCFCRCCKTCF 118

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +L  + K G + D   F  LI     +  V E+V +   M + G + +V +Y+++  
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            I + G   +A     KM    ++    TY+ ++        ++ AI  F++M+++GI  
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            +VTYN+++ G  +  K ++  +L  +M  + I P VI++  +I  +V   +  +A  ++
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM +  + PN +TY +L+ G C   ++ E   +L  MV     P D   F  L+   CK
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSP-DIVTFTSLIKGYCK 357

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              ++    + + + +  +      Y IL++ FC++   + A +L  ++V   ++  P  
Sbjct: 358 VKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVL--P-- 413

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSA 433
               +  +Y  ++  LC NG+  KA   F  L K K  LD V +  +I G  K G  + A
Sbjct: 414 ----DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDA 469

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           + +   +  +GV  +   Y  +I    +KG  ++A   L  M EDG+ P    + +++ +
Sbjct: 470 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRA 529

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              DG +  ++++++ M   G   +   +  +++ L
Sbjct: 530 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 131/546 (23%), Positives = 236/546 (43%), Gaps = 55/546 (10%)

Query: 100 SYGKK---GIVQ----ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            YG++   GIV     +++ +F  M +     S+  +   F  +    ++ +   +  KM
Sbjct: 32  CYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKM 91

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
              GI    +T N+M+  F    K   A      +   G   D  T+NT+ING     K+
Sbjct: 92  ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKV 151

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV--------------ER------------ 246
            EA  L A M E   +P V++Y +++ G                  ER            
Sbjct: 152 SEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTI 211

Query: 247 ---------ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
                     D A+ +F EM++  +K + VTY +L+ GLC AGK  +  ++L++M  R I
Sbjct: 212 IDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKI 271

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +   F  L+ V  K G L  A ++ K MI   I      Y  L++ +C       A 
Sbjct: 272 IP-NVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVA 416
            +LD +V      R   + D+   ++  +I+  C   +  +    FR++ K+G V + V 
Sbjct: 331 NMLDLMV------RNNCSPDI--VTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVT 382

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           ++ L++G  + G  + A E+ + M   GV  D   Y  L++     G+   A    + + 
Sbjct: 383 YSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 442

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           +   +    ++  ++E + + G+V+ A  +  S+  KGVK N+     ++  L  +G + 
Sbjct: 443 KSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 502

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA   +  M + G+ PN   +++L+      G   A+ KL++         D +S + V+
Sbjct: 503 EANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562

Query: 594 DALLAA 599
           D L +A
Sbjct: 563 DMLSSA 568



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/495 (22%), Positives = 224/495 (45%), Gaps = 15/495 (3%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDE 214
           GI   R  Y   L    + +K + AI  F++M +SR +   +V ++   +G    K+ + 
Sbjct: 25  GISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLP-SLVDFSRFFSGVASTKQFNL 83

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
                 +M+   I   + +   MI  +    +   A  +  ++     +P+  T+  L+ 
Sbjct: 84  VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 143

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GLC   K+ E   ++  MVE    P +   +  ++   CKSG  + A D+L+ M   ++ 
Sbjct: 144 GLCLESKVSEAVVLVARMVENGCQP-NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVK 202

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   Y  +I++ C+    D AI L  ++  K I    +S+L     +YN ++  LC  G
Sbjct: 203 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI----KSSL----VTYNSLVGGLCKAG 254

Query: 395 QTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +        + +  + ++ + + FN LI    KEG    A E+ K M  +G+  +   Y 
Sbjct: 255 KWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYN 314

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            L++ Y  +   ++A   LD M+ +  SP    F S+++   +  RV    ++ + + ++
Sbjct: 315 SLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKR 374

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G+  N    + +++     G +E A      M+  G +P+   +  LL  L + GK   A
Sbjct: 375 GLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKA 434

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           +++ +        +D+  Y  +++ +   GK  +A+++   +  KG   +  +   +I+G
Sbjct: 435 LEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 494

Query: 631 LNQEGNTKQADILSR 645
           L ++G+  +A+IL R
Sbjct: 495 LCKKGSLSEANILLR 509


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/534 (23%), Positives = 255/534 (47%), Gaps = 23/534 (4%)

Query: 51  LFNHDRETHL--------KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYG 102
           LF+    TH+        K++  L + G +  A  +L  + ++G+  +   + + I    
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           + G + E+V++ D M+   V   V +Y+ L + + ++     A  Y  +M+++G  P   
Sbjct: 233 EAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           TYN ++ G+     ++ A    +D   +G   D VTY ++ING      ++ A +LF E 
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           + K I+P ++ Y +++KG         AL++ +EM      P+  TY  ++ GLC  G +
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 283 VEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
            +   V+ + + + Y+P  D   F  L+   CK   L++A  +++ M    I  +   Y 
Sbjct: 412 SDATVVMNDAIMKGYLP--DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 469

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            ++   CKA   +   +   +++ K     P         +YN +I++ C + +  +A  
Sbjct: 470 SVLNGLCKAGKVNEVNETFQEMILKGCHPNP--------ITYNILIENFCRSNKMEEASK 521

Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
              ++ ++G+  D V+FN LI G  + G+ + A+ + + +  +G    AD +  LI ++ 
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 581

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
            K     A+   D M+  GH   S  +R +++   +   V  A   +  M++KG   ++ 
Sbjct: 582 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 641

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
              +++ +L +   V +A+G I +M++ G VP  + + ++L+   K IAA K+L
Sbjct: 642 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP--EVVDTILNADKKEIAAPKIL 693



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 132/615 (21%), Positives = 249/615 (40%), Gaps = 74/615 (12%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++   I +Y + G ++++V  F+ M       +  +Y+A+   ++    +  A + + +M
Sbjct: 52  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L+ G+ P  HT+ + L  F L+ +   A+R    +  RG     V Y T++ G       
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT 167

Query: 213 DEAEKLFAEMKEKNIEP-----------------------------------TVISYTTM 237
            +A +LF +M   ++ P                                    + +Y   
Sbjct: 168 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I+G     R  +A+R+ D M+++ V P+ VTY  L+ GLC      E    LR M+ +  
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLK-AMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
            P D+  +  ++   CK   +  A ++LK A+ +  +P +   Y  LI   C     +RA
Sbjct: 287 LP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVT-YCSLINGLCAEGDVERA 344

Query: 357 IKLLDK-------------------LVEKEIILRPQSTLDMEA--------SSYNPMIQH 389
           ++L ++                   L  + +IL     ++  A         +YN +I  
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404

Query: 390 LCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC  G    A +     + KG L D   FN LI G+ K    DSA ++V+ M   G+  D
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 464

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  ++    + G+  +       MI  G  P    +  ++E+     +++ AS+V+ 
Sbjct: 465 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 524

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKG 565
            M ++G+  +      ++      G +E A     +++    S +   F++L+   S K 
Sbjct: 525 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 584

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
               A K+ D  L +    D  +Y  ++D          AY  L ++++KG +    +  
Sbjct: 585 NMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFG 644

Query: 626 KLIAGLNQEGNTKQA 640
           ++I  L       QA
Sbjct: 645 RVINSLTVNHRVFQA 659



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 226/521 (43%), Gaps = 24/521 (4%)

Query: 9   RLQNKIRAL-VPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL 66
           RL + +RA  VP    +N +   L      + A+ + R +   G    D  T+  +I+  
Sbjct: 242 RLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF-TYNTIIDGY 300

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
            ++  +  A  +L D   KG   D+  +  LI     +G V+ ++++F+  +  G++  +
Sbjct: 301 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 360

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
             Y++L K +  +G  + A +  N+M  EG  P   TYN+++ G      +  A     D
Sbjct: 361 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND 420

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
              +G   DV T+NT+I+GY +  K+D A +L   M E  I P  I+Y +++ G     +
Sbjct: 421 AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 480

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            ++    F EM      PN +TY  L+   C + KM E  KV+ +M +  + P D   F 
Sbjct: 481 VNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP-DAVSFN 539

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+   C++G L  A  + + +        A  +  LI  F        A K+ D+++ K
Sbjct: 540 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 599

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHS 425
                       ++ +Y  +I   C      +A +   +++KKG +  ++ F  +I   +
Sbjct: 600 --------GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651

Query: 426 KEGNPDSAFEIVKIMGRRG-VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH--SP 482
                  A  I+ IM + G VP   D  +        K E A  K  ++ +++ GH   P
Sbjct: 652 VNHRVFQAVGIIHIMVKIGVVPEVVDTIL-----NADKKEIAAPKILVEDLMKKGHISYP 706

Query: 483 ASSLFRSVMES---LFEDGRVQTASRVMKSMVEKGVKENLD 520
              +    ++S     E G+ + +    +   E  V+ N+D
Sbjct: 707 TYEVLHEGVQSTIYCLEYGKQRASDPKCRKTTEGCVEINVD 747



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 105/521 (20%), Positives = 212/521 (40%), Gaps = 52/521 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT-YNVMLWGFFLSLKLETAIRF 183
           +V +Y AL + +   GR            S     T H  Y   +  +  + +L  A+  
Sbjct: 13  TVPAYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDA 72

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           FE M           YN +++        D+A K++  M    + P + ++T  ++ +  
Sbjct: 73  FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 132

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             R   ALR+   +        AV Y  ++ GL   G   + +++  +M+  ++ P + +
Sbjct: 133 TARPHIALRLLRALP----HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFP-NLA 187

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            F K+L   CK G      DVL+A +                             LL K+
Sbjct: 188 AFNKVLHALCKRG------DVLEAGL-----------------------------LLGKV 212

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRG 423
           +        Q  + +   +YN  I+ LC  G+  +A      +    V D V +N LIRG
Sbjct: 213 I--------QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRG 264

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K+  P  A   ++ M  +G   D   Y  +I+ Y +     +A   L   +  G  P 
Sbjct: 265 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 324

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + S++  L  +G V+ A  +      KG+K ++ +   +++ L ++G +  AL  ++
Sbjct: 325 QVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 384

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M + G  P+   ++ +++ L + G    A  +++  + +  + D+ ++  ++D      
Sbjct: 385 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 444

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           K  +A  ++ ++ E G   D  + + ++ GL + G   + +
Sbjct: 445 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 485



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/420 (20%), Positives = 166/420 (39%), Gaps = 49/420 (11%)

Query: 227 IEPTVIS--YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
           + P  I   Y   I+ Y    R  DA+  F+ M  F   P A  Y A++  L DA    +
Sbjct: 44  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 103

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             KV   M+   + P  ++  ++L    C +   + A  +L+A+          +  ++ 
Sbjct: 104 AHKVYVRMLAAGVSPDLHTHTIRLRSF-CLTARPHIALRLLRALPHRG---AVAYCTVVC 159

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             +     +D A +L D+++   +            +++N ++  LC  G   +A +   
Sbjct: 160 GLYAHGHTHD-ARQLFDQMLHTHVF--------PNLAAFNKVLHALCKRGDVLEAGLLLG 210

Query: 405 QLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++++G+ ++   +N  IRG  + G    A  +V  M    VP D   Y  LI    +K 
Sbjct: 211 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKS 269

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
            P +A   L  M+  G  P    + ++++   +   VQ A+ ++K  V KG   +     
Sbjct: 270 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 329

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
            ++  L   G VE AL   +     G  P                               
Sbjct: 330 SLINGLCAEGDVERALELFNEAQAKGIKP------------------------------- 358

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            D+  Y  ++  L   G  L+A  ++ ++ E+G   D ++ + +I GL + GN   A ++
Sbjct: 359 -DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 231/523 (44%), Gaps = 46/523 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L R  ++  A  +L +M   GV  DE  F  L++ + ++G ++ ++++   M + G
Sbjct: 203 LIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG 262

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +  + + L     + GR   A  Y  + +++G EP + TYN  + G   +  +  A+
Sbjct: 263 CSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHAL 322

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +  + M   G   DV TYNT+IN  ++  ++DEA+ +  +M ++   P   ++ T+I   
Sbjct: 323 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 382

Query: 242 VAVERADDAL-----------------------------------RIFDEMKSFDVKPNA 266
            +  R ++AL                                   R+F+EMKS    P+ 
Sbjct: 383 SSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDE 442

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VTY  L+  LC  GK+     +L EM E    P+    +  ++   CK   +  A +V  
Sbjct: 443 VTYNILIDHLCSMGKLGNALDLLNEM-ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFD 501

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M    I   A  +  LI+  CKA+  D A +L++++V++   L+P +       +YN +
Sbjct: 502 QMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG--LQPNNI------TYNSI 553

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           + H C  G   KA      +   G  +D V +  LI G  K G    A ++++ M  +G+
Sbjct: 554 LTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 613

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE-DGRVQTAS 504
                AY  +I+S  R+    DA      M E G  P +  ++ V  SL    G ++ A 
Sbjct: 614 RPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAF 673

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             +  MV KG          + E LL  G  +  +  I+L+++
Sbjct: 674 DFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIE 716



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/562 (22%), Positives = 253/562 (45%), Gaps = 20/562 (3%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           D + +   L    + E AL+          F      + ++++ LG  G  +    ++ +
Sbjct: 55  DQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVRE 114

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-----GVERSVKSYDALFKLI 136
           M ++G Q    +    +ESY +     ++V +  ++ QL     GV+     ++ L  ++
Sbjct: 115 MRREGHQVRAVVVRSFVESYARLRRFDDAVDL--VLNQLDNDTFGVQADTVVFNHLLNVL 172

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
           +   +  + +  +N+M   GI+P   T N ++     + ++ TA+   E+M S G++ D 
Sbjct: 173 VEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDE 232

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
            T+ T++ G+     ++ A ++ A+M E    PT ++   +I GY  + R +DAL    +
Sbjct: 233 TTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ 292

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
             +   +P+ VTY   + GLC  G +    KV+  M++    P D   +  ++    K+G
Sbjct: 293 EIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP-DVFTYNTVINCLSKNG 351

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L+ A  ++  M+      +   +  LI         + A+ L  +L  K         L
Sbjct: 352 ELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVK--------GL 403

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
             +  ++N +I  LC  G        F ++   G   D V +N LI      G   +A +
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALD 463

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           ++  M   G PR    Y  +I++  +K    +A+   D M   G S ++  F ++++ L 
Sbjct: 464 LLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLC 523

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVP 552
           +  R+  A+ +++ MV++G++ N      IL     +G++++A   ++ M  +G    V 
Sbjct: 524 KAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVV 583

Query: 553 NFDSLLSVLSEKGKTIAAVKLL 574
            + +L++ L + G+T  A+KLL
Sbjct: 584 TYGTLINGLCKAGRTQVALKLL 605



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 141/295 (47%), Gaps = 3/295 (1%)

Query: 14  IRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           ++ L P  +  N++ N L    +    ++ F  ++ +G    D  T+  +I+ L  +GKL
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGC-TPDEVTYNILIDHLCSMGKL 458

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
            +A  +L +M   G       +  +I++  KK  ++E+ ++FD M   G+ RS  +++ L
Sbjct: 459 GNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTL 518

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + +  R   A     +M+ EG++P   TYN +L  +     ++ A    E M + G 
Sbjct: 519 IDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGF 578

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
            +DVVTY T+ING  +  +   A KL   M+ K I PT  +Y  +I+         DAL 
Sbjct: 579 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALN 638

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVERYIPPKDNSVFM 306
           +F EM      P+A+TY  +   LC  G  + E    L EMV +   P+ +S  M
Sbjct: 639 LFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRM 693


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 142/616 (23%), Positives = 254/616 (41%), Gaps = 49/616 (7%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           AW    +N + AL  +     V  VL   K+   A+++FRW ER     H  E++  ++ 
Sbjct: 47  AWGPSAENALSALNFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLL 106

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           ++ R    +    IL +M   G     +    ++ S  K   ++E   +   M++     
Sbjct: 107 VMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRP 166

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           +  +Y  L           M    F +M   G EPT H +  ++ GF    ++++A+   
Sbjct: 167 AFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLL 226

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           ++MKS  +  D+V YN  I+ + +  K+D A K F E++   ++P  ++YT+MI      
Sbjct: 227 DEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKA 286

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL-REMVERYIPPKDNS 303
            R D+A+ +F+ ++     P    Y  ++ G   AGK  E   +L R+  +  IP    S
Sbjct: 287 NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP----S 342

Query: 304 VFMKLLGVQC--KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           V      + C  K G ++ A  V + M + + P     Y ILI+  C+A   D A +L D
Sbjct: 343 VIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPN-LSTYNILIDMLCRAGKLDCAFELRD 401

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL-MKKGVLDPVAFNNL 420
            +         ++ L     + N M+  LC + +  +A   F Q+  K    D + F +L
Sbjct: 402 SM--------QKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSL 453

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  K G  D A++I + M       ++  Y  LI+++   G   D       M+    
Sbjct: 454 IDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNC 513

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           SP   L  + M+ +F+ G  +    + + +  +    +    + ++  L+  G   E   
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETY- 572

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
                           L   + E+G                C++D  +Y  V+D     G
Sbjct: 573 ---------------ELFYSMKEQG----------------CVLDTRAYNIVIDGFCKCG 601

Query: 601 KTLNAYSILFKIMEKG 616
           K   AY +L ++  KG
Sbjct: 602 KVNKAYQLLEEMKTKG 617



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 150/617 (24%), Positives = 279/617 (45%), Gaps = 44/617 (7%)

Query: 65  ILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++G    +NH+  +L     M + G +    +F  LI  + K+G V  ++ + D MK   
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++  +  Y+       + G+  MA ++F+++ + G++P   TY  M+     + +L+ A+
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293

Query: 182 RFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
             FE + K+R +      YNTMI GY    K DEA  L    + K   P+VI+Y  ++  
Sbjct: 294 EMFEHLEKNRRVPC-TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              + + D+ALR+F+EMK  D  PN  TY  L+  LC AGK+    ++   M +  + P 
Sbjct: 353 LRKMGKVDEALRVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPN 411

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
             +V + ++   CKS  L+ A  + + M  ++  P E   +  LI+   K    D A K+
Sbjct: 412 VRTVNI-MVDRLCKSQKLDEACAIFEQMDYKVCTPDEI-TFCSLIDGLGKVGRVDDAYKI 469

Query: 360 LDKLVEKEIILRPQSTL----------------------DMEASSYNPMIQHL-----C- 391
            +K+++ +   R  S +                      DM   + +P +Q L     C 
Sbjct: 470 YEKMLDSDC--RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCM 527

Query: 392 -HNGQTGKAEIFFRQL-MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              G+  K    F ++  ++ V D  +++ LI G  K G  +  +E+   M  +G   D 
Sbjct: 528 FKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
            AY  +I+ + + G+   A   L+ M   G  P    + SV++ L +  R+  A  + + 
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
              K ++ N+ + + +++     G ++EA   ++ +MQ G  PN   ++SLL  L +  +
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEE 707

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A+          C  +  +Y  +++ L    K   A+    ++ ++G      S   
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767

Query: 627 LIAGLNQEGNTKQADIL 643
           +I+GL + GN  +A  L
Sbjct: 768 MISGLAKAGNIAEAGAL 784



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 205/459 (44%), Gaps = 46/459 (10%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ ++L  A   + A +    +++AGLF + R  ++ M++ L +  KL+ A  I   M
Sbjct: 380 YNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNI-MVDRLCKSQKLDEACAIFEQM 438

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K    DE  F  LI+  GK G V ++ KI++ M       +   Y +L K     GR 
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR------------ 190
               + +  M+++   P     N  +   F + + E     FE++KSR            
Sbjct: 499 EDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSIL 558

Query: 191 -----------------------GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
                                  G  LD   YN +I+G+ +  K+++A +L  EMK K  
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
           EPTV++Y ++I G   ++R D+A  +F+E KS  ++ N V Y++L+ G    G++ E   
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +L E++++ + P +   +  LL    K+  +N A    ++M  L        YGILI   
Sbjct: 679 ILEELMQKGLTP-NVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL- 406
           CK   +++A     ++ ++   ++P +       SY  MI  L   G   +A   F +  
Sbjct: 738 CKVRKFNKAFVFWQEMQKQG--MKPSTI------SYTTMISGLAKAGNIAEAGALFDRFK 789

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
              GV D   +N +I G S       AF + +   RRG+
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/591 (21%), Positives = 257/591 (43%), Gaps = 48/591 (8%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+  +        + A +FF  +E  GL   D  T+  MI +L +  +L+ A  +   +
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K         +  +I  YG  G   E+  + +  +  G   SV +Y+ +   + + G+ 
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R F +M  +   P   TYN+++     + KL+ A    + M+  G+  +V T N M
Sbjct: 360 DEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIM 418

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++   + +K+DEA  +F +M  K   P  I++ ++I G   V R DDA +I+++M   D 
Sbjct: 419 VDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDC 478

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP----------------------- 299
           + N++ YT+L+    + G+  +  K+ ++MV +   P                       
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538

Query: 300 -----------KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                       D   +  L+    K+G  N   ++  +M       +   Y I+I+ FC
Sbjct: 539 MFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K    ++A +LL+++  K          +    +Y  +I  L    +  +A + F +   
Sbjct: 599 KCGKVNKAYQLLEEMKTK--------GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           K + L+ V +++LI G  K G  D A+ I++ + ++G+  +   +  L+++ ++  E  +
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINE 710

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A     SM E   +P    +  ++  L +  +   A    + M ++G+K +      ++ 
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
            L   G++ EA    D    +G VP+   +++++  LS   + + A  L +
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 1/254 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+V +          A Q    ++  G F     T+  +I+ L ++ +L+ A  +  + 
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K ++ +  ++  LI+ +GK G + E+  I + + Q G+  +V ++++L   +++    
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEI 708

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   F  M      P + TY +++ G     K   A  F+++M+ +G+    ++Y TM
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +   + EA  LF   K     P    Y  MI+G     RA DA  +F+E +   +
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828

Query: 263 KPNAVTYTALLPGL 276
             +  T   LL  L
Sbjct: 829 HIHNKTCVVLLDTL 842



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/198 (19%), Positives = 82/198 (41%), Gaps = 35/198 (17%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL- 120
           +I+  G+VG+++ A  IL ++ +KG+  +   +  L+++  K   + E++  F  MK+L 
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 121 ----------------------------------GVERSVKSYDALFKLILRRGRYMMAK 146
                                             G++ S  SY  +   + + G    A 
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
             F++  + G  P    YN M+ G     +   A   FE+ + RG+ +   T   +++  
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842

Query: 207 NRFKKMDEAEKLFAEMKE 224
           ++   +++A  + A ++E
Sbjct: 843 HKNDCLEQAAIVGAVLRE 860


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 236/521 (45%), Gaps = 11/521 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A+QFF W      + HD  ++  +++IL + G       +  D+   G   +   F++LI
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
               K G    +++    + +  V   V  ++ L   + + G    A + F  M S  + 
Sbjct: 70  RGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVN 129

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG--ISLDVVTYNTMIN-GYNRFKKMDEA 215
           P   TYN ++ G   S  LE A    E+M  RG   + D+VTYNT+IN G  +   ++EA
Sbjct: 130 PDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEA 189

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            ++   MK     P VI+Y ++I       R  +A  I   +K+    P+ VT+  LL G
Sbjct: 190 LEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEI---LKTMSCSPDLVTFNTLLDG 246

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            C AG +    +VL EM    I P D   +  L+   C+ G +  A  +L+ ++R     
Sbjct: 247 FCKAGMLPRALEVLEEMCRENILP-DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP 305

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS--SYNPMIQHLCHN 393
           +   Y  L++  CK+   + A KL+ ++  +E IL    +++M     +YN ++  L  +
Sbjct: 306 DVIAYTSLVDGLCKSGEIEEAHKLVKEMSARE-ILAEMVSINMVPPLFTYNIVLGGLIKD 364

Query: 394 GQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G   KA      L+ +G V D V +N LI G  K      A ++   M   G   +    
Sbjct: 365 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTL 424

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             ++    R G   DA + +  M    H+P   ++ S+++ L +  R+  A  V+ +M  
Sbjct: 425 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRG 484

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +GV  +     K++ +++  G V EA+   D M+  G +P+
Sbjct: 485 QGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPD 525



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/535 (22%), Positives = 249/535 (46%), Gaps = 29/535 (5%)

Query: 110 SVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           +++ FD   +Q G +  V SY+ L  ++++ G      + +  +L  G  P   T+ +++
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G   + +   A+ F   +    ++ DV  +N +I+G  +    D+A KLF  M+   + 
Sbjct: 70  RGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVN 129

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEM--KSFDVKPNAVTYTALL-PGLCDAGKMVEV 285
           P + +Y T+I G       + A  + +EM  +     P+ VTY  L+  G+C  G + E 
Sbjct: 130 PDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEA 189

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            ++L  M +   P  D   +  ++   C +G +  AA++LK M   S   +   +  L++
Sbjct: 190 LEILDGM-KLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLD 245

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
            FCKA M  RA+++L+++  + I+         +  +Y  ++  LC  GQ   A     +
Sbjct: 246 GFCKAGMLPRALEVLEEMCRENIL--------PDVITYTILVNGLCRVGQVQVAFYLLEE 297

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA---------YICL 455
           ++++G + D +A+ +L+ G  K G  + A ++VK M  R +  +  +         Y  +
Sbjct: 298 IVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIV 357

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           +   ++ G  + A + +  ++  G+ P    + ++++ L +  RV+ A  +   M   G 
Sbjct: 358 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGC 417

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             N   +  ++  L   G V++A   +  M +    PN   + SL+  L +  +   A  
Sbjct: 418 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACV 477

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
           +LD   G+   +D  +Y K++ +++  G+   A ++  +++ +G + D  +S  L
Sbjct: 478 VLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 212/484 (43%), Gaps = 63/484 (13%)

Query: 26  VYNVL-HGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           ++N L HG     N + A++ F  +E + + N D  T+  +I  L + G L  AR +L +
Sbjct: 99  IFNFLIHGLFKDGNPDQAVKLFENMESSRV-NPDIFTYNTVISGLCKSGNLEKARELLEE 157

Query: 82  MPKKGVQWDEDM--FEVLIES-YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           M ++G +   D+  +  LI +   K G V+E+++I D MK  G    V +Y+++   +  
Sbjct: 158 MIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCV 217

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            GR + A                                       E +K+   S D+VT
Sbjct: 218 AGRVVEAA--------------------------------------EILKTMSCSPDLVT 239

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           +NT+++G+ +   +  A ++  EM  +NI P VI+YT ++ G   V +   A  + +E+ 
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK--------LLG 310
                P+ + YT+L+ GLC +G++ E  K+++EM  R I  +  S+ M         +LG
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
              K G ++ A  ++  ++      +   Y  LI+  CKA     A  L D++       
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF- 418

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGN 429
            P         +   ++  LC  G+   A  +      K+   + V + +LI G  K   
Sbjct: 419 -PNDV------TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDR 471

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            D A  ++  M  +GV  D  AY  LI S +  G  A+A    D M+  G  P  S  ++
Sbjct: 472 MDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKT 531

Query: 490 VMES 493
           + E+
Sbjct: 532 LEEA 535


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 189/372 (50%), Gaps = 11/372 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++  +I+   K   + +++ +F  M+  G+  +V +Y +L   +   GR+  A R  + M
Sbjct: 53  IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 112

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +   I P   T++ ++  F    KL  A + +++M  R I   +VTY+++ING+    ++
Sbjct: 113 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 172

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           DEA+++F  M  K+  P V++Y T+IKG+   +R ++ + +F EM    +  N VTY  L
Sbjct: 173 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 232

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GL  AG     Q++ +EMV   +PP +   +  LL   CK+G L  A  V + + R  
Sbjct: 233 IQGLFQAGDCDMAQEIFKEMVSDGVPP-NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y I+IE  CKA   +    L   L  K +  +P      +  +YN MI   C 
Sbjct: 292 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV--KP------DVVAYNTMISGFCR 343

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G   +A+  F+++ + G L +   +N LIR   ++G+ +++ E++K M   G   DA +
Sbjct: 344 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA-S 402

Query: 452 YICLIESYLRKG 463
            I L+ + L  G
Sbjct: 403 TIGLVTNMLHDG 414



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 200/404 (49%), Gaps = 12/404 (2%)

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + D M   G +  + +Y  +   + +RG   +A    NKM    +EP    YN ++ G  
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               ++ A+  F++M+++GI  +VVTY+++I+    + +  +A +L ++M E+ I P V 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +++ +I  +V   +  +A +++DEM    + P+ VTY++L+ G C   ++ E +++   M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           V ++  P D   +  L+   CK   +    +V + M +  +      Y ILI+   +A  
Sbjct: 183 VSKHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            D A ++  ++V   +   P + +     +YN ++  LC NG+  KA + F  L ++  +
Sbjct: 242 CDMAQEIFKEMVSDGV---PPNIM-----TYNTLLDGLCKNGKLEKAMVVFEYL-QRSKM 292

Query: 413 DPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
           +P    +N +I G  K G  +  +++   +  +GV  D  AY  +I  + RKG   +A  
Sbjct: 293 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 352

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
               M EDG  P S  + +++ +   DG  + ++ ++K M   G
Sbjct: 353 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 396



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 193/392 (49%), Gaps = 13/392 (3%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M ++G   D+VTY  ++NG  +    D A  L  +M++  +EP V+ Y T+I G    + 
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            DDAL +F EM++  ++PN VTY++L+  LC+ G+  +  ++L +M+ER I P D   F 
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP-DVFTFS 125

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+    K G L  A  +   M++ SI      Y  LI  FC  +  D A ++ + +V K
Sbjct: 126 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 185

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHS 425
                P      +  +YN +I+  C   +  +    FR++ ++G++ + V +N LI+G  
Sbjct: 186 HCF--P------DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 237

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           + G+ D A EI K M   GVP +   Y  L++   + G+   A    + +      P   
Sbjct: 238 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 297

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            +  ++E + + G+V+    +  ++  KGVK ++     ++     +G  EEA      M
Sbjct: 298 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
            + G++PN   +++L+      G   A+ +L+
Sbjct: 358 KEDGTLPNSGCYNTLIRARLRDGDREASAELI 389



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 209/423 (49%), Gaps = 11/423 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  KG Q D   + V++    K+G    +  + + M+Q  +E  V  Y+ +   + +   
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F +M ++GI P   TY+ ++       +   A R   DM  R I+ DV T++ 
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+ + +  K+ EAEKL+ EM +++I+P++++Y+++I G+   +R D+A ++F+ M S  
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             P+ VTY  L+ G C   ++ E  +V REM +R +     +  + + G+  ++G  + A
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF-QAGDCDMA 245

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            ++ K M+   +P     Y  L++  CK    ++A+ + + L         +S ++    
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL--------QRSKMEPTIY 297

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN MI+ +C  G+       F  L  KGV  D VA+N +I G  ++G+ + A  + K M
Sbjct: 298 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G   ++  Y  LI + LR G+   +   +  M   G +  +S    ++ ++  DGR+
Sbjct: 358 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRL 416

Query: 501 QTA 503
             +
Sbjct: 417 DKS 419



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 182/377 (48%), Gaps = 11/377 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L   K+ + AL  F+ +E  G+   +  T+  +I  L   G+ + A  +L DM
Sbjct: 54  YNTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDM 112

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ +  D   F  LI+++ K+G + E+ K++D M +  ++ S+ +Y +L        R 
Sbjct: 113 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 172

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             AK+ F  M+S+   P   TYN ++ GF    ++E  +  F +M  RG+  + VTYN +
Sbjct: 173 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 232

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G  +    D A+++F EM    + P +++Y T++ G     + + A+ +F+ ++   +
Sbjct: 233 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 292

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P   TY  ++ G+C AGK+ +   +   +  + + P D   +  ++   C+ G    A 
Sbjct: 293 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP-DVVAYNTMISGFCRKGSKEEAD 351

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            + K M        +G Y  LI    +A + D      D+    E+I   +S      +S
Sbjct: 352 ALFKEMKEDGTLPNSGCYNTLI----RARLRDG-----DREASAELIKEMRSCGFAGDAS 402

Query: 383 YNPMIQHLCHNGQTGKA 399
              ++ ++ H+G+  K+
Sbjct: 403 TIGLVTNMLHDGRLDKS 419



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/395 (20%), Positives = 165/395 (41%), Gaps = 44/395 (11%)

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           + + D M +   +P+ VTY  ++ GLC  G       +L +M +  + P    ++  ++ 
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG-VLIYNTIID 59

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             CK  H++ A ++ K M    I      Y  LI   C    +  A +LL  ++E++I  
Sbjct: 60  GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI-- 117

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEG 428
                 + +  +++ +I      G+  +AE  + +++K+ + DP  V +++LI G     
Sbjct: 118 ------NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHD 170

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             D A ++ + M  +    D   Y  LI+ + +     +       M + G    +  + 
Sbjct: 171 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 230

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            +++ LF+ G    A  + K MV  GV  N+     +L+ L   G +E+A+   + + +S
Sbjct: 231 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 290

Query: 549 GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
              P                                 + +Y  +++ +  AGK  + + +
Sbjct: 291 KMEPT--------------------------------IYTYNIMIEGMCKAGKVEDGWDL 318

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
              +  KG   D  + + +I+G  ++G+ ++AD L
Sbjct: 319 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 353


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 231/531 (43%), Gaps = 32/531 (6%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I      G +  A+  L  +   G+  D   +   +  Y + G++  + ++F +M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G  R+  +Y AL   +L  G    A   F  M ++   P  H Y  M+ G   + + 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A    E+  S G   ++V YN +I+GY    +M+ A K+F  M      P V +YT +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G     + + A+ +F  M    ++PN VTYTAL+ G C+ G +    ++L  M    +
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D + F  L+   CK   +  A   L ++++  +      Y  LI+  CK    D A 
Sbjct: 314 VPNDWT-FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           +L+ K++ +  +         +A SY+ +I  LC   +  +A +    +M+KG+   PV 
Sbjct: 373 ELMQKMISEGFV--------PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  +I    +E   +   +I   M   G+  D   Y   + SY  +G   DA++ +  M+
Sbjct: 425 YTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL------- 529
           + G  P    + +++      G V  A    + MV KG K N D    +L  +       
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSD 544

Query: 530 -------------LMRGHVEEALGRIDL--MMQSGSVPNFDSLLSVLSEKG 565
                        L   + +E + +I +  ++Q GSV  F SLLSV+ E G
Sbjct: 545 NSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHG 595



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 140/568 (24%), Positives = 252/568 (44%), Gaps = 65/568 (11%)

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
           R++++Y  L       G    AK++   +L  G+ P  + Y   + G+  +  L  A R 
Sbjct: 70  RNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRV 129

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  M  RG      TY  +++G      + EA  +F  M+  +  P    Y TM+ G   
Sbjct: 130 FVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCE 189

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             R ++A  + +E  S   +PN V Y AL+ G C+AG+M    KV   M      P   +
Sbjct: 190 AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            + +L+   CKSG +  A  +   M+   +      Y  LI+  C       A +LL  L
Sbjct: 250 -YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLL-HL 307

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIR 422
           +E   ++    T       ++ +I  LC   +  +A++F   L+KKGV ++ V + +LI 
Sbjct: 308 METNGLVPNDWT-------FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG--H 480
           G  K G  D+A E+++ M   G   DA +Y  LI+   R+ + + A   L+ M+E G   
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 481 SPAS------SLFRSV---------------------------MESLFEDGRVQTASRVM 507
           SP +       L R V                           + S  E+GR++ A  ++
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEK 564
             MV++GV  NL     ++      G V +A    ++M+  G  PN DS   LL ++ +K
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
             +  +V +      +D  +  ++Y++++  +L           ++ +++KG V ++ S 
Sbjct: 541 SSSDNSVDIWKIADMKD--LQESNYDEIVWKIL-----------IYGLLQKGSVAEFSS- 586

Query: 625 DKLIAGLNQEGNTKQADILSRMIRGEMS 652
             L++ + + G  + ++ ++ MI GE++
Sbjct: 587 --LLSVMKEHG-YQPSNTINAMITGEIT 611



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 212/468 (45%), Gaps = 20/468 (4%)

Query: 182 RFFEDMKS---RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           R F DM+S   R  + ++ TY T+IN Y     +  A++    +    + P   +YT+ +
Sbjct: 55  RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFV 114

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            GY        A R+F  M        A TYTALL GL  AG + E   V   M      
Sbjct: 115 LGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCA 174

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D  V+  ++   C++G    A  +L+  +          Y  LI+ +C A   + A+K
Sbjct: 175 P-DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VA 416
           + + +          +       +Y  +I  LC +G+  +A + F ++++ G L+P  V 
Sbjct: 234 VFEGM--------DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG-LEPNVVT 284

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYICLIESYLRKGEPADAKTALDSM 475
           +  LI+G   EG+   AF ++ +M   G VP D   +  LI++  ++ +  +A+  L S+
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW-TFSVLIDALCKREKVEEAQLFLGSL 343

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           ++ G      ++ S+++ L + G++  A  +M+ M+ +G   +    + +++ L  +  +
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403

Query: 536 EEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
            +A   ++ MM+ G   S   +  ++  L  +  +    K+ D  +      D+ +Y   
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVF 463

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           + +    G+  +A S++ +++++G   +  + + LI G    G   QA
Sbjct: 464 VRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/527 (21%), Positives = 229/527 (43%), Gaps = 61/527 (11%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +  + + L GA     A+  F  + RA     D   +  M+  L   G+   A  +L 
Sbjct: 143 FTYTALLHGLLGAGMVREAMAVFVGM-RADSCAPDTHVYATMVHGLCEAGRTEEAEVLLE 201

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +    G + +  ++  LI+ Y   G ++ ++K+F+ M       +V++Y  L   + + G
Sbjct: 202 EAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSG 261

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A   F++M+  G+EP   TY  ++ G      L+ A R    M++ G+  +  T++
Sbjct: 262 KVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFS 321

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+   + +K++EA+     + +K ++   + YT++I G     + D A  +  +M S 
Sbjct: 322 VLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE 381

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+A +Y++L+ GLC   K+ +   +L +M+E+              G+Q        
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK--------------GIQ-------- 419

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A+ V               Y I+I+   +    +   K+ DK++   I        + + 
Sbjct: 420 ASPVT--------------YTIIIDELVREVGSEGPKKIFDKMIATGI--------NPDI 457

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y   ++  C  G+   AE    Q++ +GV  + V +N LIRG++  G    AF   ++
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517

Query: 440 MGRRGVPRDADAYICLIESYLRKGEP---------ADAKTALDSMIEDGHSPASSLFRSV 490
           M  +G   + D+Y  L+   ++K            AD K   +S  ++       +++ +
Sbjct: 518 MVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDE------IVWKIL 571

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           +  L + G V   S ++  M E G + +  + A I   + +   V+E
Sbjct: 572 IYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEVQE 618


>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Brachypodium distachyon]
          Length = 684

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 263/583 (45%), Gaps = 20/583 (3%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAK--NSEHALQFFRWVERAGL-FNHDRE 57
           +AE  W  RL ++  A +P+     V  VL GA   +    ++ + W  R G  F  D  
Sbjct: 48  LAEEDWFPRLNSEFAAAMPRLGPRFVVRVLRGAAPLDPHLCVRLYVWASRFGAHFARDAS 107

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
               + + L R G    +  ++ ++   G +  E++   LI S+G+ G+ Q + ++F  M
Sbjct: 108 VRRALEDALWRRGPAVLSAALVAEVRGCGCEVSEELLRALIASWGRLGLAQYAHEVFVQM 167

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            +LG+  S   Y+AL    +R G    A   F +M ++G +P   TYN ++ G      +
Sbjct: 168 PRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGII 227

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+R    M+  GI  +V TY  +++G+    + ++A  +F  MKEK + P   SY T+
Sbjct: 228 DEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTL 287

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-Y 296
           + G         A  +  E    +  P+   +  +L  L       EV +V ++M  R Y
Sbjct: 288 VHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGY 347

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +   DN++F  ++    K   L+    +L   ++         Y ++I++    +   +A
Sbjct: 348 L--LDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKA 405

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
              L ++V   ++           +SYN +I      G   KA    +++ +KGVL + V
Sbjct: 406 NHYLKRMVLDGLL--------SGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLV 457

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            FN LI G+SK GN  +A  ++K++   G+  D   +  LI       +  DA    + M
Sbjct: 458 TFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEM 517

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN-LDLVAKILEALLMRGH 534
            E G  P +  +  +M +L   G V  A  ++  M + G+  +     A IL    M+  
Sbjct: 518 AEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMK-K 576

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           V++A    + M++ G VP+   ++SL+  L ++ +   A ++L
Sbjct: 577 VDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEIL 619



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 16/330 (4%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  +G   D  +F +++    K   + +   + D   + G       Y  + K +L    
Sbjct: 342 MNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKS 401

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A  Y  +M+ +G+     +YN+++  F  +  ++ A    ++M+ +G+  ++VT+NT
Sbjct: 402 SSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNT 461

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+GY++   +  A+ +   + E  + P +I++T++I G     + DDA   F+EM  + 
Sbjct: 462 LISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWG 521

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V+PNA TY  L+  LC AG + +   +L +M +  I P   S    +L   C+   ++ A
Sbjct: 522 VRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSF-CRMKKVDKA 580

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            ++  AM+RL +  +   Y  LI+  C     D A         KEI+L  +S+     +
Sbjct: 581 RNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEA---------KEILLLMESSGSSATT 631

Query: 382 SYN--PMIQHLCHNGQTGKAEIFFRQLMKK 409
            +   P++  L   GQ  KA     QLM K
Sbjct: 632 HHTHLPIVSALTKTGQFSKAG----QLMNK 657



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 4/257 (1%)

Query: 19  PQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           P FD + +V   L G K+S  A  + + +   GL +     ++ +I+   + G ++ A  
Sbjct: 384 PGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNM-VIDCFVKAGAVDKAAE 442

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           I+ +M +KGV  +   F  LI  Y K G V  +  +  ++ + G+   + ++ +L   + 
Sbjct: 443 IIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLC 502

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
              +   A   FN+M   G+ P  HTYNV++     +  +  AI     MK  GI+ D  
Sbjct: 503 HTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAY 562

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           ++N  I  + R KK+D+A  +F  M    + P   +Y ++IK      R D+A  I   M
Sbjct: 563 SFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLM 622

Query: 258 KSFDVKPNAVTYTALLP 274
           +S     +A T+   LP
Sbjct: 623 ES--SGSSATTHHTHLP 637



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 113/245 (46%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + ++I+ + K G V ++ +I   M++ GV  ++ +++ L     + G    AK     ++
Sbjct: 424 YNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLM 483

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+ P   T+  ++ G   + +L+ A   F +M   G+  +  TYN +++       ++
Sbjct: 484 EHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVN 543

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  L  +MK+  I P   S+   I  +  +++ D A  IF+ M    V P+  TY +L+
Sbjct: 544 KAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLI 603

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LCD  ++ E +++L  M         +   + ++    K+G  + A  ++    R ++
Sbjct: 604 KALCDERRIDEAKEILLLMESSGSSATTHHTHLPIVSALTKTGQFSKAGQLMNKYNRRNV 663

Query: 334 PTEAG 338
               G
Sbjct: 664 QLSCG 668



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 49/320 (15%)

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNP 430
           P+  L    + YN +I      G    A + F+Q+   G   D   +N L+ G  + G  
Sbjct: 168 PRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGII 227

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D A  +V+ M   G+  +   Y  L++ +   G P DA    D+M E G SP  + +R++
Sbjct: 228 DEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTL 287

Query: 491 MESLFED--------------GR---------------------VQTASRVMKSMVEKGV 515
           +   F                GR                      +    V K M  +G 
Sbjct: 288 VHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGY 347

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL--------SEKGKT 567
             +  +   ++   +    + +  G +D  ++ G  P FD  + V+        S K   
Sbjct: 348 LLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANH 407

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
                +LD  L       + SY  V+D  + AG    A  I+ ++ EKG + +  + + L
Sbjct: 408 YLKRMVLDGLLS-----GVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTL 462

Query: 628 IAGLNQEGNTKQADILSRMI 647
           I+G ++ GN   A  + +M+
Sbjct: 463 ISGYSKLGNVHNAKAVLKML 482


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 211/441 (47%), Gaps = 13/441 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            L++ +    K SE      R V+R    N    T+  ++  L + G  + A  +L  M 
Sbjct: 157 TLIHGLFLHNKASEAVALVDRMVQRGCQPN--LVTYGVVVNGLCKRGDTDLALNLLNKME 214

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
              ++ D  +F  +I+S  K   V +++ +F  M+  G+  +V +Y +L   +   GR+ 
Sbjct: 215 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 274

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A +  + M+ + I P   T+N ++  F    K   A + ++DM  R I  D+ TYN+++
Sbjct: 275 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 334

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG+    ++D+A+++F  M  K+  P V++Y T+IKG+   +R +D   +F EM    + 
Sbjct: 335 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 394

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            + VTYT L+ GL   G     QKV ++MV   +PP D   +  LL   C +G L  A +
Sbjct: 395 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTYSILLDGLCNNGKLEKALE 453

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V   M +  I  +   Y  +IE  CKA   D    L   L  K +  +P         +Y
Sbjct: 454 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV--KPN------VVTY 505

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N MI  LC      +A    +++ + G L +   +N LIR H ++G+  ++ E+++ M  
Sbjct: 506 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 565

Query: 443 RGVPRDADAYICLIESYLRKG 463
                DA + I L+ + L  G
Sbjct: 566 CRFVGDA-STIGLVANMLHDG 585



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 222/497 (44%), Gaps = 48/497 (9%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M++L +   + +Y+ L     RR +  +A     KM+  G EP+  T + +L G+    +
Sbjct: 73  MQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 132

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY-- 234
           +  A+   + M   G   D +T+ T+I+G     K  EA  L   M ++  +P +++Y  
Sbjct: 133 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 192

Query: 235 ---------------------------------TTMIKGYVAVERADDALRIFDEMKSFD 261
                                             T+I         DDAL +F EM++  
Sbjct: 193 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 252

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           ++PN VTY++L+  LC  G+  +  ++L +M+E+ I P +   F  L+    K G    A
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP-NLVTFNALIDAFVKEGKFVEA 311

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   MI+ SI  +   Y  L+  FC  +  D+A ++ + +V K+    P      +  
Sbjct: 312 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF--P------DVV 363

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +I+  C + +       FR++  +G++ D V +  LI+G   +G+ D+A ++ K M
Sbjct: 364 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 423

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              GVP D   Y  L++     G+   A    D M +        ++ +++E + + G+V
Sbjct: 424 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 483

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
                +  S+  KGVK N+     ++  L  +  ++EA   +  M + G +PN   +++L
Sbjct: 484 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 543

Query: 558 LSVLSEKGKTIAAVKLL 574
           +      G   A+ +L+
Sbjct: 544 IRAHLRDGDKAASAELI 560



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/481 (23%), Positives = 215/481 (44%), Gaps = 10/481 (2%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           H   T+  +I    R  +++ A  +L  M K G +        L+  Y     + ++V +
Sbjct: 80  HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 139

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
            D M ++G      ++  L   +    +   A    ++M+  G +P   TY V++ G   
Sbjct: 140 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 199

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
               + A+     M++  I  DVV +NT+I+   +++ +D+A  LF EM+ K I P V++
Sbjct: 200 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 259

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y+++I    +  R  DA ++  +M    + PN VT+ AL+      GK VE +K+  +M+
Sbjct: 260 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 319

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +R I P D   +  L+   C    L+ A  + + M+      +   Y  LI+ FCK++  
Sbjct: 320 KRSIDP-DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 378

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-L 412
           +   +L  ++  + ++         +  +Y  +IQ L H+G    A+  F+Q++  GV  
Sbjct: 379 EDGTELFREMSHRGLV--------GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 430

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D + ++ L+ G    G  + A E+   M +  +  D   Y  +IE   + G+  D     
Sbjct: 431 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 490

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
            S+   G  P    + +++  L     +Q A  ++K M E G   N      ++ A L  
Sbjct: 491 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRD 550

Query: 533 G 533
           G
Sbjct: 551 G 551



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 209/444 (47%), Gaps = 12/444 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           +L+    HG + S+      + VE    +  D  T   +I  L    K + A  ++  M 
Sbjct: 122 SLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGLFLHNKASEAVALVDRMV 179

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           ++G Q +   + V++    K+G    ++ + + M+   +E  V  ++ +   + +     
Sbjct: 180 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 239

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F +M ++GI P   TY+ ++       +   A +   DM  + I+ ++VT+N +I
Sbjct: 240 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 299

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           + + +  K  EAEKL+ +M +++I+P + +Y +++ G+   +R D A ++F+ M S D  
Sbjct: 300 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 359

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ VTY  L+ G C + ++ +  ++ REM  R +   D   +  L+      G  + A  
Sbjct: 360 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL-VGDTVTYTTLIQGLFHDGDCDNAQK 418

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V K M+   +P +   Y IL++  C     ++A+++ D + + EI L        +   Y
Sbjct: 419 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL--------DIYIY 470

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             MI+ +C  G+       F  L  KGV  + V +N +I G   +     A+ ++K M  
Sbjct: 471 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 530

Query: 443 RGVPRDADAYICLIESYLRKGEPA 466
            G   ++  Y  LI ++LR G+ A
Sbjct: 531 DGPLPNSGTYNTLIRAHLRDGDKA 554



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 231/529 (43%), Gaps = 15/529 (2%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+  ++ L   I +  ++ +      KM    I    +TYN+++  F    ++  A+   
Sbjct: 46  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 105

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
             M   G    +VT ++++NGY   K++ +A  L  +M E    P  I++TT+I G    
Sbjct: 106 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 165

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            +A +A+ + D M     +PN VTY  ++ GLC  G       +L +M    I   D  +
Sbjct: 166 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA-DVVI 224

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           F  ++   CK  H++ A ++ K M    I      Y  LI   C    +  A +LL  ++
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIR 422
           EK+I   P         ++N +I      G+  +AE  +  ++K+ + DP    +N+L+ 
Sbjct: 285 EKKI--NPNLV------TFNALIDAFVKEGKFVEAEKLYDDMIKRSI-DPDIFTYNSLVN 335

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G       D A ++ + M  +    D   Y  LI+ + +     D       M   G   
Sbjct: 336 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 395

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            +  + ++++ LF DG    A +V K MV  GV  ++   + +L+ L   G +E+AL   
Sbjct: 396 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 455

Query: 543 DLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
           D M +S     +  + +++  + + GK      L      +    ++ +Y  ++  L + 
Sbjct: 456 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 515

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
                AY++L K+ E G + +  + + LI    ++G+   +  L R +R
Sbjct: 516 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 564



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 113/525 (21%), Positives = 213/525 (40%), Gaps = 56/525 (10%)

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGY 206
           Y+ +  S G       Y  +L      +KL+ AI  F  M KSR +   +V +N +++  
Sbjct: 3   YWGRAFSSG----SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLP-SIVEFNKLLSAI 57

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            + KK D    L  +M+   I   + +Y  +I  +    +   AL +  +M     +P+ 
Sbjct: 58  AKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSI 117

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL----------------- 309
           VT ++LL G C   ++ +   ++ +MVE    P D   F  L+                 
Sbjct: 118 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP-DTITFTTLIHGLFLHNKASEAVALVD 176

Query: 310 -----GVQ-------------CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
                G Q             CK G  + A ++L  M    I  +   +  +I++ CK  
Sbjct: 177 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 236

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             D A+ L  ++  K I  RP         +Y+ +I  LC  G+   A      +++K +
Sbjct: 237 HVDDALNLFKEMETKGI--RPN------VVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288

Query: 412 LDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
            +P  V FN LI    KEG    A ++   M +R +  D   Y  L+  +        AK
Sbjct: 289 -NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 347

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              + M+     P    + ++++   +  RV+  + + + M  +G+  +      +++ L
Sbjct: 348 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 407

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
              G  + A      M+  G  P+   +  LL  L   GK   A+++ D+    +  +D+
Sbjct: 408 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 467

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
             Y  +++ +  AGK  + + +   +  KG   +  + + +I+GL
Sbjct: 468 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 512


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 231/523 (44%), Gaps = 46/523 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L R  ++  A  +L +M    V  DE  F  L++ + ++G ++ ++++   M + G
Sbjct: 201 LIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETG 260

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +  + + L     + GR   A  Y  K +++G EP + TYN  +     +  +  A+
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHAL 320

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +  + M   G   DV TYNT+IN  ++  ++DEA+ +  +M ++   P   ++ T+I   
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380

Query: 242 VAVERADDAL-----------------------------------RIFDEMKSFDVKPNA 266
            +  R ++AL                                   R+F+EMKS    P+ 
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VTY  L+  LC  GK+V    +L+EM E    P+    +  ++   CK   +  A +V  
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEM-ESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD 499

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M    I   A  +  LI+  CKA+  D A +L++++V++   L+P +       +YN +
Sbjct: 500 QMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG--LQPSNI------TYNSI 551

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           + H C  G   KA      +   G  +D V +  LI G  K G    A ++++ M  +G+
Sbjct: 552 LTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 611

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE-DGRVQTAS 504
                AY  +I+S  R+    DA +    M E G  P +  ++ V   L    G ++ A 
Sbjct: 612 RPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAF 671

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             +  MV KG          + E LL  G  +  +  I+L+++
Sbjct: 672 DFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIE 714



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 140/633 (22%), Positives = 278/633 (43%), Gaps = 16/633 (2%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           D + +   L    + E ALQ          F   R  + ++I+ LG  G  +    ++ +
Sbjct: 55  DQDRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVRE 114

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRG 140
           M ++G +    +    +ESY +     ++V +  + +   GV+     Y+ L  ++    
Sbjct: 115 MRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGS 174

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R  + +  +N+M   GI+P   T N ++     + ++ TA+   E+M S  ++ D  T+ 
Sbjct: 175 RMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFT 234

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T++ G+     ++ A ++  +M E    PT ++   +I GY  + R +DAL    +  + 
Sbjct: 235 TLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD 294

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             +P+ VTY   +  LC  G +    KV+  M++    P D   +  ++    K+G L+ 
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDP-DVFTYNTVINCLSKNGELDE 353

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  ++  M+      +   +  LI   C     + A+ L  +L  K         L  + 
Sbjct: 354 AKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVK--------GLSPDV 405

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            ++N +I  LC  G        F ++   G   D V +N LI      G   +A +++K 
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE 465

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G PR    Y  +I++  ++    +A+   D M   G S ++  F ++++ L +  R
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKR 525

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDS 556
           +  A+ +++ MV++G++ +      IL     +G +++A   ++ M  +G    V  + +
Sbjct: 526 IDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGT 585

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L++ L + G+T  A+KLL     +       +Y  V+ +L       +A S+  ++ E G
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645

Query: 617 GVTDWKSSDKLIAGLNQEGN-TKQA-DILSRMI 647
              D  +   +  GL + G   K+A D L  M+
Sbjct: 646 EPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMV 678



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 202/462 (43%), Gaps = 51/462 (11%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE--THLKMIEILGRVGKLNHARC 77
           Q  +N   + L    +  HAL+    + + G   HD +  T+  +I  L + G+L+ A+ 
Sbjct: 300 QVTYNTFVHCLCQNGHVSHALKVMDLMLQEG---HDPDVFTYNTVINCLSKNGELDEAKG 356

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           I+  M  +G   D   F  LI +   +  ++E++ +   +   G+   V +++ L   + 
Sbjct: 357 IVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 416

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G   +  R F +M S G  P   TYN+++       KL  A+   ++M+S G     V
Sbjct: 417 KVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTV 476

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYNT+I+   +  +++EAE++F +M    I  + +++ T+I G    +R DDA  + ++M
Sbjct: 477 TYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 536

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               ++P+ +TY ++L   C                                    K G 
Sbjct: 537 VKEGLQPSNITYNSILTHYC------------------------------------KQGD 560

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           L  AAD+L+ M       +   YG LI   CKA     A+KLL  +  K I   P+    
Sbjct: 561 LKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPK---- 616

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP-DSAFE 435
               +YNP+IQ L        A   FR++ + G   D + +  + RG  + G P   AF+
Sbjct: 617 ----AYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 672

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
            +  M  +G   +  ++  L E  L  G      +A++ +IE
Sbjct: 673 FLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIE 714



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 143/295 (48%), Gaps = 3/295 (1%)

Query: 14  IRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           ++ L P  +  N++ N L    +    ++ F  ++ +G    D  T+  +I+ L  +GKL
Sbjct: 398 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGC-APDEVTYNILIDHLCSMGKL 456

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
            +A  +L +M   G       +  +I++  K+  ++E+ ++FD M   G+ RS  +++ L
Sbjct: 457 VNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTL 516

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + +  R   A     +M+ EG++P+  TYN +L  +     L+ A    E M + G 
Sbjct: 517 IDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGF 576

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
            +DVVTY T+ING  +  +   A KL   M+ K I PT  +Y  +I+         DAL 
Sbjct: 577 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALS 636

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVERYIPPKDNSVFM 306
           +F EM      P+A+TY  +  GLC  G  + E    L EMV +   P+ +S  M
Sbjct: 637 LFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRM 691


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 253/530 (47%), Gaps = 34/530 (6%)

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
           +AR +  +M  + V  D   F  ++ +  +KG V ES  +   + + G+  +  + +   
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           + +   GR   A     +M    + P   TYN ++ G     K++ A ++   M ++G  
Sbjct: 254 RGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            D  TYNT+I+GY +   + EA +L  +   K   P  ++Y ++I G  A    + AL +
Sbjct: 313 PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALEL 372

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F+E ++ D+KP+ V Y +L+ GLC  G ++   +V+ EMVE    P D   +  ++   C
Sbjct: 373 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHP-DIWTYNIIINGLC 431

Query: 314 KSGHLNAAADVLK-AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---I 369
           K G+++ AA V+  A+++  +P +   +  LI+ +CK    D A++L++++    I   +
Sbjct: 432 KMGNISDAAVVMNDAIVKGYLP-DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDV 490

Query: 370 LRPQSTLD------------------------MEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
           +   S L+                          A +YN +I++ C   Q  +A     +
Sbjct: 491 ITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 550

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           + + G++ D V+FN LI G  + G+ D A+ + + +  +G    AD +  LI +Y  K  
Sbjct: 551 MCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 610

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              A+     MI  G+ P    +R +++ L +   V  A   +  M+ KG   ++    +
Sbjct: 611 MQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGR 670

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
           +L  L M   V EA+  I +M++ G VP  + + ++LS   K IAA K+L
Sbjct: 671 MLNLLAMNHRVSEAVAIIHIMVRMGVVP--EVVDTILSTDKKEIAAPKIL 718



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 133/625 (21%), Positives = 254/625 (40%), Gaps = 69/625 (11%)

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
           + ++   I++Y + G ++ +V  F+ M       +  +Y+A+   ++    +  A + + 
Sbjct: 71  QPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYV 130

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +ML+ G+ P   T+ V L  F L+ +   A+R    +  RG       Y T++ G     
Sbjct: 131 RMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHG 190

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTM--------------------------------- 237
               A  LF EM  +++ P V ++  +                                 
Sbjct: 191 HGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCN 250

Query: 238 --IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
             I+G     R ++A+ + + M ++ V P+ VTY  L+ GLC   K+ E  + L  M+ +
Sbjct: 251 IWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ 309

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P D+  +  ++   CKSG L  A ++LK  +      +   Y  LI   C     +R
Sbjct: 310 GCIP-DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIER 368

Query: 356 AIKLLDK-------------------LVEKEIILRPQSTLD--------MEASSYNPMIQ 388
           A++L ++                   L  + +IL     ++         +  +YN +I 
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G    A +     + KG L D   FN LI G+ K    DSA ++V+ M   G+  
Sbjct: 429 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAP 488

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  ++    + G+  +     + MI  G  P +  +  ++E+  +  +++ AS V+
Sbjct: 489 DVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 548

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEK 564
             M + G+  +      ++      G ++ A     ++D    S +   F+ L+   S K
Sbjct: 549 VRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 608

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
                A K+    + +    DL +Y  ++D L  A     AY+ L +++ KG V    + 
Sbjct: 609 LNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATF 668

Query: 625 DKLIAGLNQEGNTKQA-DILSRMIR 648
            +++  L       +A  I+  M+R
Sbjct: 669 GRMLNLLAMNHRVSEAVAIIHIMVR 693



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 175/377 (46%), Gaps = 12/377 (3%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  DR T+  +I  L   G +  A  +  +   K ++ D  ++  L++   ++G++  ++
Sbjct: 346 FVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 405

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++ + M + G    + +Y+ +   + + G    A    N  + +G  P   T+N ++ G+
Sbjct: 406 QVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGY 465

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
              LKL++A++  E M + GI+ DV+TYN+++NG  +  K  E  + F EM  K   P  
Sbjct: 466 CKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 525

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I+Y  +I+ +  + + ++A  +   M    + P+AV++  L+ G C  G +     + ++
Sbjct: 526 ITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQK 585

Query: 292 MVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           + E+ Y    D   F  L+G      ++  A  +   MI      +   Y IL++  CKA
Sbjct: 586 LDEKGYSATADT--FNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKA 643

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
              DRA   L +++ K  +           +++  M+  L  N +  +A      +++ G
Sbjct: 644 ANVDRAYAHLAEMISKGFV--------PSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMG 695

Query: 411 VLDPVAFNNLIRGHSKE 427
           V+ P   + ++    KE
Sbjct: 696 VV-PEVVDTILSTDKKE 711


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 151/624 (24%), Positives = 286/624 (45%), Gaps = 24/624 (3%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL---GRVGKLNHARCILLDM 82
           V + L  A     AL+ FR   R     H   +   M++++   GRVG +     +   M
Sbjct: 139 VIHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAE---VFDVM 195

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ V+ +   F  +    G +G ++ +     +MK+ G+  +  +Y+ L   +++ G  
Sbjct: 196 QRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD 255

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   +  M+ +G+ P+  TY+V++  F     +ET +    +M++ G+  +V +Y   
Sbjct: 256 REALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 315

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I    + ++ DEA ++ AEM+ +  +P VI++T +I+      R  DA  +F +MK  D 
Sbjct: 316 IRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 375

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSV-FMKLLGVQCKSGHLNA 320
           KP+ VTY  LL    D G+   V ++   M  + Y    DN V +  ++   C+ G +  
Sbjct: 376 KPDRVTYITLLDKFADNGESQSVMEIWNAMKADGY---NDNVVAYTAVIDALCQVGRVFE 432

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A ++   M +  I  E   Y  LI  F KA+ +  A++L   +     I  P+       
Sbjct: 433 ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYM----DIHGPKPN----G 484

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            ++   I +   +G++ KA   +  +  KG++ D VA N ++ G +K G    A  +   
Sbjct: 485 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 544

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +   GV  D   Y  +I+   +  +  +A      MIE+   P   +  S++++L++ GR
Sbjct: 545 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGR 604

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
              A ++   + E  ++        +L  L   G V+E +  ++ M  S   PN   +++
Sbjct: 605 GDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 664

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           +L  L + G    A+ +L     + CI DL+SY  V+  L+   +   A+SI F  M+K 
Sbjct: 665 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSI-FCQMKKV 723

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQA 640
            + D+ +   ++    + G  K+A
Sbjct: 724 LIPDYATLCTILPSFVKIGLMKEA 747



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 155/659 (23%), Positives = 280/659 (42%), Gaps = 67/659 (10%)

Query: 48   RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV 107
            +A  +N +   +  +I+ L +VG++  A  +  +M +KG+  ++  +  LI  + K    
Sbjct: 406  KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRF 465

Query: 108  QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
             +++++F  M   G + +  ++        + G  + A + +  M S+GI P     N +
Sbjct: 466  GDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 525

Query: 168  LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
            L+G   S +L  A R F ++K+ G+S D +TY  MI   ++  K DEA K+F +M E N 
Sbjct: 526  LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 585

Query: 228  EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
             P V+   ++I       R D+A +IF ++K  +++P   TY  LL GL   GK+ EV  
Sbjct: 586  VPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 645

Query: 288  VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
            +L EM     PP +   +  +L   CK+G +N A D+L +M       +   Y  +I   
Sbjct: 646  LLEEMYHSNYPP-NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 704

Query: 348  CKAEMYDRAIKLLDKL-----------------------------VEKEIILRPQSTLD- 377
             K E Y+ A  +  ++                             + KE  L+P S  D 
Sbjct: 705  VKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDR 764

Query: 378  ------ME------------------ASS--------YNPMIQHLCHNGQTGKAEIFFRQ 405
                  ME                  ASS          P+I+HLC   +  +A    ++
Sbjct: 765  SSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKK 824

Query: 406  LMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
                GV L   ++N+LI G   E   D A  +   M   G   D   Y  L+++  +   
Sbjct: 825  FKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMR 884

Query: 465  PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              +     + M   G+      + +++  L +  R++ A  +  +++ +G          
Sbjct: 885  IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 944

Query: 525  ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
            +L+ LL  G +E+A    + M++ G   N   ++ LL+     G T     L    + + 
Sbjct: 945  LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1004

Query: 582  CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
               D+ SY  ++D L  AG+  +  +   +++E G   D  + + LI GL +    ++A
Sbjct: 1005 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEA 1063



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 142/632 (22%), Positives = 277/632 (43%), Gaps = 30/632 (4%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + + +   VL  A+  + A +    +E  G    D  TH  +I++L   G+++ A+ +  
Sbjct: 310 YSYTICIRVLGQARRFDEAYRILAEMENEGC-KPDVITHTVLIQVLCDAGRISDAKDVFW 368

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M K   + D   +  L++ +   G  Q  ++I++ MK  G   +V +Y A+   + + G
Sbjct: 369 KMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVG 428

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A   F++M  +GI P +++YN ++ GF  + +   A+  F+ M   G   +  T+ 
Sbjct: 429 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHV 488

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
             IN Y +  +  +A + +  MK K I P V++   ++ G     R   A R+F E+K+ 
Sbjct: 489 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 548

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+ +TYT ++     A K  E  K+  +M+E    P D  V   L+    K+G  + 
Sbjct: 549 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP-DVLVVNSLIDTLYKAGRGDE 607

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +   +  +++    G Y  L+    +       + LL+++          S      
Sbjct: 608 AWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY--------HSNYPPNL 659

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +YN ++  LC NG    A      +  KG + D  ++N +I G  KE   + AF I   
Sbjct: 660 ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 719

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTAL-DSMIEDGHSPASSLFRSVMESLFEDG 498
           M +  +P D      ++ S+++ G   +A   + +  ++ G     S   S+ME + +  
Sbjct: 720 MKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKA 778

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA------LGRIDLMMQSGSVP 552
             + +    + +   G+  +   +  +++ L  +    EA           + +++GS  
Sbjct: 779 GTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGS-- 836

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            ++SL+  L ++     A  L        C  D  +Y  +LDA+   GK++    +L K+
Sbjct: 837 -YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIEEML-KV 891

Query: 613 ME----KGGVTDWKSSDKLIAGLNQEGNTKQA 640
            E    KG  + + + + +I+GL +    +QA
Sbjct: 892 QEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 923



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 173/350 (49%), Gaps = 10/350 (2%)

Query: 86   GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
            G+  D+     LI+   K+    E+ ++    K  GV     SY++L   ++      +A
Sbjct: 794  GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIA 853

Query: 146  KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            +  F +M   G  P   TYN++L     S+++E  ++  E+M  +G     VTYNT+I+G
Sbjct: 854  EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISG 913

Query: 206  YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
              + +++++A  L+  +  +   PT  +Y  ++ G +   R +DA  +F+EM  +  K N
Sbjct: 914  LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 973

Query: 266  AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
               Y  LL G   AG   +V  + ++MV++ I P D   +  ++   CK+G LN      
Sbjct: 974  CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP-DIKSYTIIIDTLCKAGQLNDGLTYF 1032

Query: 326  KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
            + ++ + +  +   Y +LI+   K++  + A+ L +++ +K I+            +YN 
Sbjct: 1033 RQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV--------PNLYTYNS 1084

Query: 386  MIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
            +I HL   G+  +A   + +L+ KG    V  +N LIRG+S  G+ DSA+
Sbjct: 1085 LILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAY 1134



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 143/669 (21%), Positives = 273/669 (40%), Gaps = 50/669 (7%)

Query: 21   FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
            + H L  N    +  S  A+Q +  ++  G+   D      ++  L + G+L  A+ +  
Sbjct: 485  YTHVLFINYYGKSGESIKAIQRYELMKSKGIVP-DVVAGNAVLFGLAKSGRLGMAKRVFH 543

Query: 81   DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            ++   GV  D   + ++I+   K     E+VKIF  M +      V   ++L   + + G
Sbjct: 544  ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAG 603

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
            R   A + F ++    +EPT  TYN +L G     K++  +   E+M       +++TYN
Sbjct: 604  RGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 663

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            T+++   +   +++A  +   M  K   P + SY T+I G V  ER ++A  IF +MK  
Sbjct: 664  TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 723

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             + P+  T   +LP     G M E   +++E   +     D S    L+    K      
Sbjct: 724  LI-PDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEK 782

Query: 321  AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
            + +  + +    I  +      LI++ CK +    A +L+ K     + L+         
Sbjct: 783  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK--------T 834

Query: 381  SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG----------VLDP---------------- 414
             SYN +I  L        AE  F ++ + G          +LD                 
Sbjct: 835  GSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 894

Query: 415  ----------VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
                      V +N +I G  K    + A ++   +  +G       Y  L++  L+ G 
Sbjct: 895  MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 954

Query: 465  PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              DA+   + M+E G     +++  ++      G  +    + + MV++G+  ++     
Sbjct: 955  IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 1014

Query: 525  ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
            I++ L   G + + L     +++ G  P+   ++ L+  L +  +   AV L +    + 
Sbjct: 1015 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 1074

Query: 582  CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA- 640
             + +L +Y  ++  L  AGK   A  +  +++ KG   +  + + LI G +  G+T  A 
Sbjct: 1075 IVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAY 1134

Query: 641  DILSRMIRG 649
                RMI G
Sbjct: 1135 AAYGRMIVG 1143



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 1/246 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N + + L  ++  E A+  +  +   G F+    T+  +++ L + G++  A  +  +M
Sbjct: 907  YNTIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 965

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + G + +  ++ +L+  +   G  ++   +F  M   G+   +KSY  +   + + G+ 
Sbjct: 966  LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 1025

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 YF ++L  G+EP   TYN+++ G   S +LE A+  F +M+ +GI  ++ TYN++
Sbjct: 1026 NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSL 1085

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I    +  K  EA K++ E+  K  +P V +Y  +I+GY      D A   +  M     
Sbjct: 1086 ILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGC 1145

Query: 263  KPNAVT 268
             PN+ T
Sbjct: 1146 LPNSST 1151



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            + ++ + L  A      L +FR +   GL   D  T+  +I+ LG+  +L  A  +  +M
Sbjct: 1012 YTIIIDTLCKAGQLNDGLTYFRQLLEMGL-EPDLITYNLLIDGLGKSKRLEEAVSLFNEM 1070

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KKG+  +   +  LI   GK G   E+ K+++ +   G + +V +Y+AL +     G  
Sbjct: 1071 QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGST 1130

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNV 166
              A   + +M+  G  P   T ++
Sbjct: 1131 DSAYAAYGRMIVGGCLPNSSTCHI 1154


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 211/441 (47%), Gaps = 13/441 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            L++ +    K SE      R V+R    N    T+  ++  L + G  + A  +L  M 
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPN--LVTYGVVVNGLCKRGDTDLALNLLNKME 252

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
              ++ D  +F  +I+S  K   V +++ +F  M+  G+  +V +Y +L   +   GR+ 
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A +  + M+ + I P   T+N ++  F    K   A + ++DM  R I  D+ TYN+++
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG+    ++D+A+++F  M  K+  P V++Y T+IKG+   +R +D   +F EM    + 
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            + VTYT L+ GL   G     QKV ++MV   +PP D   +  LL   C +G L  A +
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTYSILLDGLCNNGKLEKALE 491

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V   M +  I  +   Y  +IE  CKA   D    L   L  K +  +P         +Y
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV--KPN------VVTY 543

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N MI  LC      +A    +++ + G L +   +N LIR H ++G+  ++ E+++ M  
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603

Query: 443 RGVPRDADAYICLIESYLRKG 463
                DA + I L+ + L  G
Sbjct: 604 CRFVGDA-STIGLVANMLHDG 623



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/520 (23%), Positives = 230/520 (44%), Gaps = 48/520 (9%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ +  K       + + + M++L +   + +Y+ L     RR +  +A     KM+
Sbjct: 88  FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G EP+  T + +L G+    ++  A+   + M   G   D +T+ T+I+G     K  
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 214 EAEKLFAEMKEKNIEPTVISY-----------------------------------TTMI 238
           EA  L   M ++  +P +++Y                                    T+I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
                    DDAL +F EM++  ++PN VTY++L+  LC  G+  +  ++L +M+E+ I 
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +   F  L+    K G    A  +   MI+ SI  +   Y  L+  FC  +  D+A +
Sbjct: 328 P-NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
           + + +V K+    P      +  +YN +I+  C + +       FR++  +G++ D V +
Sbjct: 387 MFEFMVSKDCF--P------DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
             LI+G   +G+ D+A ++ K M   GVP D   Y  L++     G+   A    D M +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
                   ++ +++E + + G+V     +  S+  KGVK N+     ++  L  +  ++E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           A   +  M + G +PN   +++L+      G   A+ +L+
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/481 (23%), Positives = 215/481 (44%), Gaps = 10/481 (2%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           H   T+  +I    R  +++ A  +L  M K G +        L+  Y     + ++V +
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
            D M ++G      ++  L   +    +   A    ++M+  G +P   TY V++ G   
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
               + A+     M++  I  DVV +NT+I+   +++ +D+A  LF EM+ K I P V++
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y+++I    +  R  DA ++  +M    + PN VT+ AL+      GK VE +K+  +M+
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +R I P D   +  L+   C    L+ A  + + M+      +   Y  LI+ FCK++  
Sbjct: 358 KRSIDP-DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-L 412
           +   +L  ++  + ++         +  +Y  +IQ L H+G    A+  F+Q++  GV  
Sbjct: 417 EDGTELFREMSHRGLV--------GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D + ++ L+ G    G  + A E+   M +  +  D   Y  +IE   + G+  D     
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
            S+   G  P    + +++  L     +Q A  ++K M E G   N      ++ A L  
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRD 588

Query: 533 G 533
           G
Sbjct: 589 G 589



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 209/444 (47%), Gaps = 12/444 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           +L+    HG + S+      + VE    +  D  T   +I  L    K + A  ++  M 
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           ++G Q +   + V++    K+G    ++ + + M+   +E  V  ++ +   + +     
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F +M ++GI P   TY+ ++       +   A +   DM  + I+ ++VT+N +I
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           + + +  K  EAEKL+ +M +++I+P + +Y +++ G+   +R D A ++F+ M S D  
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ VTY  L+ G C + ++ +  ++ REM  R +   D   +  L+      G  + A  
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL-VGDTVTYTTLIQGLFHDGDCDNAQK 456

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V K M+   +P +   Y IL++  C     ++A+++ D + + EI L        +   Y
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL--------DIYIY 508

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             MI+ +C  G+       F  L  KGV  + V +N +I G   +     A+ ++K M  
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568

Query: 443 RGVPRDADAYICLIESYLRKGEPA 466
            G   ++  Y  LI ++LR G+ A
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKA 592



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 122/529 (23%), Positives = 231/529 (43%), Gaps = 15/529 (2%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+  ++ L   I +  ++ +      KM    I    +TYN+++  F    ++  A+   
Sbjct: 84  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
             M   G    +VT ++++NGY   K++ +A  L  +M E    P  I++TT+I G    
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            +A +A+ + D M     +PN VTY  ++ GLC  G       +L +M    I   D  +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA-DVVI 262

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           F  ++   CK  H++ A ++ K M    I      Y  LI   C    +  A +LL  ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIR 422
           EK+I        +    ++N +I      G+  +AE  +  ++K+ + DP    +N+L+ 
Sbjct: 323 EKKI--------NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI-DPDIFTYNSLVN 373

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G       D A ++ + M  +    D   Y  LI+ + +     D       M   G   
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            +  + ++++ LF DG    A +V K MV  GV  ++   + +L+ L   G +E+AL   
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493

Query: 543 DLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
           D M +S     +  + +++  + + GK      L      +    ++ +Y  ++  L + 
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
                AY++L K+ E G + +  + + LI    ++G+   +  L R +R
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 113/525 (21%), Positives = 213/525 (40%), Gaps = 56/525 (10%)

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGY 206
           Y+ +  S G       Y  +L      +KL+ AI  F  M KSR +   +V +N +++  
Sbjct: 41  YWGRAFSSG----SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLP-SIVEFNKLLSAI 95

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            + KK D    L  +M+   I   + +Y  +I  +    +   AL +  +M     +P+ 
Sbjct: 96  AKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSI 155

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL----------------- 309
           VT ++LL G C   ++ +   ++ +MVE    P D   F  L+                 
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP-DTITFTTLIHGLFLHNKASEAVALVD 214

Query: 310 -----GVQ-------------CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
                G Q             CK G  + A ++L  M    I  +   +  +I++ CK  
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             D A+ L  ++  K I  RP         +Y+ +I  LC  G+   A      +++K +
Sbjct: 275 HVDDALNLFKEMETKGI--RPN------VVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326

Query: 412 LDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
            +P  V FN LI    KEG    A ++   M +R +  D   Y  L+  +        AK
Sbjct: 327 -NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              + M+     P    + ++++   +  RV+  + + + M  +G+  +      +++ L
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
              G  + A      M+  G  P+   +  LL  L   GK   A+++ D+    +  +D+
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
             Y  +++ +  AGK  + + +   +  KG   +  + + +I+GL
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/612 (21%), Positives = 262/612 (42%), Gaps = 52/612 (8%)

Query: 44  RWVERAGLFNHDRETHL--KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           R VER+       + +L  K+I  L R G+ + A  +L      G   D   +  L+  Y
Sbjct: 56  RLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGY 115

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
            + G +  + ++   +  + V     +Y  L + +  RGR   A    + ML    +P+ 
Sbjct: 116 CRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSV 172

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
            TY V+L     S     A++  ++M+++G + ++VTYN +ING  R  ++D+A ++   
Sbjct: 173 VTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNR 232

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           +     +P  +SYTT++KG  A +R +D   +F EM   +  PN VT+  L+   C  G 
Sbjct: 233 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGM 292

Query: 282 MVEVQKVLREMVER----------------------------------YIPPKDNSVFMK 307
           +    +VL  M E                                   Y    D   +  
Sbjct: 293 VERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTT 352

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           +L   C++G    A ++L  M+R + P     +   I   C+  + D+AI L++++    
Sbjct: 353 VLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQM---- 408

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKE 427
               P+    +   +YN ++   C  G+   A   F  L  +   + + +  L+ G    
Sbjct: 409 ----PEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEP--NTITYTTLLTGLCHA 462

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
              D+A E++  M +   P +   +  L+  + +KG   +A   +  M+E G +P    F
Sbjct: 463 ERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITF 522

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++++ + ED   + A  ++  +V KG+  +    + I++ L     +EEA+     +  
Sbjct: 523 NTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQD 582

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  P    ++ +LS L ++ +T  A+      +   C+ + ++Y  +++ L   G    
Sbjct: 583 MGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKE 642

Query: 605 AYSILFKIMEKG 616
           A  +L ++  +G
Sbjct: 643 ARYVLSELCSRG 654



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 116/511 (22%), Positives = 224/511 (43%), Gaps = 16/511 (3%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A R   +  S G  P  +    ++       +   A R     +  G  +DV  YNT++ 
Sbjct: 54  AARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVA 113

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           GY R+ ++D A +L A M    + P   +YT +I+G     R  DAL + D+M   + +P
Sbjct: 114 GYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQP 170

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + VTYT LL  +C +    +  KVL EM  +   P +   +  ++   C+   ++ A  +
Sbjct: 171 SVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTP-NIVTYNVIINGMCREDRVDDARQI 229

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L  +       +   Y  +++  C A+ ++    L  ++VE   +   + T DM      
Sbjct: 230 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPN-EVTFDM------ 282

Query: 385 PMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +++  C  G   +A E+  R        +    N +I    K+G  D AFE +  MG  
Sbjct: 283 -LVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSY 341

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   D  +Y  +++   R G   DAK  L+ M+     P    F + +  L + G +  A
Sbjct: 342 GCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQA 401

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
             +++ M E G    +     ++    ++G V+ AL   + +    +   + +LL+ L  
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCH 461

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
             +  AA +LL   +  DC +++ ++  ++      G    A  ++ ++ME G   +  +
Sbjct: 462 AERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLIT 521

Query: 624 SDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
            + L+ G+ ++ N+++A     ++ G +S+G
Sbjct: 522 FNTLLDGITEDCNSEEA---LELLHGLVSKG 549



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 127/571 (22%), Positives = 239/571 (41%), Gaps = 57/571 (9%)

Query: 122 VERSVKSYDA--------LFKLILRRGRYMMAKRY---------------FNKML----- 153
           VERS    +A        L + + RRGR   A R                +N ++     
Sbjct: 58  VERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCR 117

Query: 154 ------------SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
                       S  + P  +TY  ++ G     ++  A+   +DM  R     VVTY  
Sbjct: 118 YGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTV 177

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++    +     +A K+  EM+ K   P +++Y  +I G    +R DDA +I + + S+ 
Sbjct: 178 LLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYG 237

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +P+ V+YT +L GLC A +  +V+ +  EMVE    P + + F  L+   C+ G +  A
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVT-FDMLVRFFCRGGMVERA 296

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            +VL  M             I+I + CK    D A + L+ +               +  
Sbjct: 297 IEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM--------GSYGCSPDTI 348

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           SY  +++ LC  G+   A+    ++++K    + V FN  I    ++G  D A  +++ M
Sbjct: 349 SYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQM 408

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G       Y  L+  +  +G    A    +S+      P +  + +++  L    R+
Sbjct: 409 PEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERL 465

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A+ ++  M++     N+     ++     +G VEEA+  +  MM+ G  PN   F++L
Sbjct: 466 DAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTL 525

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           L  ++E   +  A++LL   + +   +D  +Y  ++D L    +   A  +   + + G 
Sbjct: 526 LDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGM 585

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
                  +K+++ L +   T +A D  + M+
Sbjct: 586 RPKAVMYNKILSALCKRCETDRAIDFFAHMV 616



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/410 (21%), Positives = 174/410 (42%), Gaps = 16/410 (3%)

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           ++ ++  +A +   +A R+ +   S    P+    T L+  LC  G+  +  +VLR   E
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLR-TAE 97

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P D   +  L+   C+ G L+AA  ++ +M    +P +A  Y  LI   C      
Sbjct: 98  GSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVG 154

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A+ LLD ++ +E   +P         +Y  +++ +C +   G+A     ++  KG   +
Sbjct: 155 DALSLLDDMLRREC--QPS------VVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPN 206

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +N +I G  +E   D A +I+  +   G   D  +Y  +++         D +    
Sbjct: 207 IVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFC 266

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+E+   P    F  ++      G V+ A  V+  M E G   N  L   ++ ++  +G
Sbjct: 267 EMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQG 326

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            V++A   ++ M   G  P+   + ++L  L   G+   A +LL+  + ++C  +  ++ 
Sbjct: 327 RVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFN 386

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             +  L   G    A  ++ ++ E G      + + L+ G   +G    A
Sbjct: 387 TFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSA 436



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 1/182 (0%)

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
           A+A   ++     G +P   L   ++ +L   GR   A+RV+++    G   ++     +
Sbjct: 52  AEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTL 111

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           +      G ++ A   I  M        +  L+  L ++G+   A+ LLD  L R+C   
Sbjct: 112 VAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPS 171

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILS 644
           + +Y  +L+A+  +     A  +L ++  KG   +  + + +I G+ +E     A  IL+
Sbjct: 172 VVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILN 231

Query: 645 RM 646
           R+
Sbjct: 232 RL 233


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 147/624 (23%), Positives = 288/624 (46%), Gaps = 23/624 (3%)

Query: 28  NVLH-----GAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           NV+H      A + E AL+ F  V R     H  E+   M+E++   G++     +   M
Sbjct: 68  NVVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLM 127

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ ++ +   F  +  + G +G ++ +     +MK+ G+  +  +Y+ L   +++ G  
Sbjct: 128 QRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFD 187

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   +  M ++G+ PT  TY+V++  F      ET +    +M++RG+  +V +Y   
Sbjct: 188 REAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTIC 247

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I    +  +++EA ++  +M+E+  +P V++ T +I+      R  DA  +F +MK+ D 
Sbjct: 248 IRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQ 307

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSV-FMKLLGVQCKSGHLNA 320
           KP+ VTY  LL    D+G    V ++   +  + Y    DN V +   +   C+ G ++ 
Sbjct: 308 KPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGY---NDNVVSYTAAVDALCQVGRVDE 364

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A DV   M +  I  +   Y  LI  F KA+ ++RA++L + +     I  P        
Sbjct: 365 ALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMN----IHGPTPN----G 416

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            ++   I +   +G++ KA   +  +  KG++ D VA N ++ G +K G    A  +   
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHE 476

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +   G+  D   Y  +I+   +     +A      MIE+  +P      S+++ L++ GR
Sbjct: 477 LKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGR 536

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
              A ++   + E  ++        +L  L   G V+E +  ++ M  +   PN   +++
Sbjct: 537 GNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNT 596

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           +L  L + G+   A+ +L       C+ DL+SY  V+  L+  G+   A+  +F  M+K 
Sbjct: 597 VLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAF-WMFCQMKKV 655

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQA 640
              D+ +   ++    + G  K+A
Sbjct: 656 LAPDYATVCTILPSFVRSGLMKEA 679



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 144/662 (21%), Positives = 273/662 (41%), Gaps = 68/662 (10%)

Query: 21   FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
            + H L  N    +  S  AL+ +  ++  G+   D      ++  L + G+L  A+ +  
Sbjct: 417  YTHVLFINYHGKSGESLKALKRYELMKSKGIV-PDVVAGNAVLYGLAKTGRLGMAKRVFH 475

Query: 81   DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            ++   G+  D   + ++I+   K     E++KIF  M +      V + ++L  ++ + G
Sbjct: 476  ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAG 535

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
            R   A + F ++    +EPT  TYN +L G     K++  ++  E M S     +++TYN
Sbjct: 536  RGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYN 595

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            T+++   +  +++ A  +   M      P + SY T++ G V   R D+A  +F +MK  
Sbjct: 596  TVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV 655

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL-------GVQ- 312
             + P+  T   +LP    +G M E    +RE + +     D S    L+       G + 
Sbjct: 656  -LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEK 714

Query: 313  ---------------------------CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
                                       CK     AA +++K    L +  + G Y  LI 
Sbjct: 715  SIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALIC 774

Query: 346  NFCKAEMYDRAIKLLDKL----------------------VEKEIILRPQSTLDMEAS-- 381
                 ++ D A +L  ++                      +  E +L+ Q  +  +    
Sbjct: 775  GLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKS 834

Query: 382  ---SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
               +YN +I  L  +    +A   + QLM +G    P  +  L+ G  K+GN + A  + 
Sbjct: 835  TYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALF 894

Query: 438  KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
              M   G   +   Y  L+  Y   G+        +SM+E G +P    +  V+++L  D
Sbjct: 895  DEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 954

Query: 498  GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
            GR+       K + + G++ +L     ++  L   G +EEAL   + M + G  PN   +
Sbjct: 955  GRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTY 1014

Query: 555  DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            +SL+  L + GK   A K+ +  L +    ++ +Y  ++     +G   NA++   +++ 
Sbjct: 1015 NSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIV 1074

Query: 615  KG 616
             G
Sbjct: 1075 GG 1076



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 148/636 (23%), Positives = 279/636 (43%), Gaps = 43/636 (6%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P  + + +   VL  A   E A +  R +E  G    D  T+  +I+IL   G+L 
Sbjct: 235 RGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGC-KPDVVTNTVLIQILCDAGRLA 293

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A+ +   M     + D   +  L++  G  G  +   +I++ +K  G   +V SY A  
Sbjct: 294 DAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAV 353

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + GR   A   F++M  +GI P +++YN ++ GF  + +   A+  F  M   G +
Sbjct: 354 DALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPT 413

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            +  T+   IN + +  +  +A K +  MK K I P V++   ++ G     R   A R+
Sbjct: 414 PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRV 473

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F E+K+  + P+ +TYT ++     A    E  K+  EM+E    P D      L+ +  
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAP-DVLAMNSLIDMLY 532

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K+G  N A  +   +  +++      Y  L+    +       ++LL+ +        P 
Sbjct: 533 KAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSF---PP 589

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDS 432
           + +     +YN ++  LC NG+   A ++ +   M   + D  ++N ++ G  KEG  D 
Sbjct: 590 NII-----TYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDE 644

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           AF +   M +   P D      ++ S++R G     K AL ++ E    P S + RS + 
Sbjct: 645 AFWMFCQMKKVLAP-DYATVCTILPSFVRSGL---MKEALHTVREYILQPDSKVDRSSVH 700

Query: 493 SLFEDGRVQTASRVMKSMVEKGVK--ENLDLVAKILEALLMRGHV------EEALGRIDL 544
           SL E         + +   EK ++  EN+     +L+ L +   +      +EAL   +L
Sbjct: 701 SLME-------GILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHEL 753

Query: 545 M---------MQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           +         +++GS   +++L+  L ++     A +L        C  D  +Y  +LDA
Sbjct: 754 VKKFENLGVSLKTGS---YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           +  + +  +   I  ++  KG  + + + + +I+GL
Sbjct: 811 MGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGL 846



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 177/376 (47%), Gaps = 10/376 (2%)

Query: 81   DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            ++   G+  D+     +I  + K      + ++    + LGV     SY+AL   ++   
Sbjct: 721  NIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDED 780

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               +A+  F++M   G +P   TY+++L     S+++E  ++  E+M ++G     VTYN
Sbjct: 781  LIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYN 840

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            T+I+G  + K +DEA  L+ ++  +   PT  +Y  ++ G +     +DA  +FDEM   
Sbjct: 841  TIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLEC 900

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              +PN   Y  LL G   AG   +V ++   MVE+ + P D   +  ++   C  G LN 
Sbjct: 901  GCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNP-DIKSYTVVIDTLCADGRLND 959

Query: 321  AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
                 K +  + +  +   Y +LI    K+   + A+ L + + +K I   P        
Sbjct: 960  GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIA--PN------L 1011

Query: 381  SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKI 439
             +YN +I +L   G+  +A   + +L+ KG    V  +N LIRG+S  G+P++AF     
Sbjct: 1012 YTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGR 1071

Query: 440  MGRRGVPRDADAYICL 455
            M   G   ++  Y+ L
Sbjct: 1072 MIVGGCRPNSSTYMQL 1087



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 126/250 (50%), Gaps = 1/250 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N + + L  +K  + A+  +  +   G F+    T+  +++ L + G +  A  +  +M
Sbjct: 839  YNTIISGLVKSKMLDEAINLYYQLMSEG-FSPTPCTYGPLLDGLLKDGNIEDAEALFDEM 897

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + G + +  ++ +L+  Y   G  ++  ++F+ M + G+   +KSY  +   +   GR 
Sbjct: 898  LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRL 957

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 YF ++   G+EP   TYN+++ G   S +LE A+  + DM+ +GI+ ++ TYN++
Sbjct: 958  NDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSL 1017

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I    +  K  EA K++ E+  K  +P V +Y  +I+GY      ++A   +  M     
Sbjct: 1018 ILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGC 1077

Query: 263  KPNAVTYTAL 272
            +PN+ TY  L
Sbjct: 1078 RPNSSTYMQL 1087



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 113/512 (22%), Positives = 215/512 (41%), Gaps = 41/512 (8%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N V + L       +AL     +   G    D  ++  ++  L + G+L+ A  +   M
Sbjct: 594  YNTVLDCLCKNGEVNYALDMLYSMTMNGCM-PDLSSYNTVMYGLVKEGRLDEAFWMFCQM 652

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQE---SVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             KK +  D      ++ S+ + G+++E   +V+ + +     V+RS  S  +L + IL+R
Sbjct: 653  -KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRS--SVHSLMEGILKR 709

Query: 140  GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS------------LKLETAIRFFEDM 187
                 +  +   + S G+         +L   FLS            L     ++ FE++
Sbjct: 710  DGTEKSIEFAENIASSGL---------LLDDLFLSPIIRHFCKHKEALAAHELVKKFENL 760

Query: 188  KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
               G+SL   +YN +I G      +D AE+LF+EMK    +P   +Y  ++       R 
Sbjct: 761  ---GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRI 817

Query: 248  DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +D L+I +EM +   K   VTY  ++ GL  +  + E   +  +++     P     +  
Sbjct: 818  EDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTP-CTYGP 876

Query: 308  LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
            LL    K G++  A  +   M+          Y IL+  +  A   ++  +L + +VE+ 
Sbjct: 877  LLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQ- 935

Query: 368  IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
                    ++ +  SY  +I  LC +G+      +F+QL   G+  D + +N LI G  K
Sbjct: 936  -------GMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGK 988

Query: 427  EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
             G  + A  +   M ++G+  +   Y  LI    + G+ A+A    + ++  G  P    
Sbjct: 989  SGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFT 1048

Query: 487  FRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
            + +++      G  + A      M+  G + N
Sbjct: 1049 YNALIRGYSVSGSPENAFAAYGRMIVGGCRPN 1080



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 93/182 (51%), Gaps = 1/182 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N++ N    A ++E   + F  +   G+ N D +++  +I+ L   G+LN        +
Sbjct: 909  YNILLNGYRIAGDTEKVCELFESMVEQGM-NPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G++ D   + +LI   GK G ++E++ +++ M++ G+  ++ +Y++L   + + G+ 
Sbjct: 968  TDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKA 1027

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A + + ++L++G +P   TYN ++ G+ +S   E A   +  M   G   +  TY  +
Sbjct: 1028 AEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087

Query: 203  IN 204
             N
Sbjct: 1088 PN 1089


>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Brachypodium distachyon]
          Length = 649

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 212/439 (48%), Gaps = 17/439 (3%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEH-ALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           L+  + AL P     LV  VL   K++   + +FF+W   +  F H   T+ KM+ ILG+
Sbjct: 191 LEATLSALSPPLSEALVLAVLDRFKHAHRPSRRFFQWAAASDEFEHTPVTYCKMLHILGK 250

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
             +      ++ +M K G     D F++ I+S+   G ++ +V +F++M+  G +  V+S
Sbjct: 251 ARQFETMVALVQEMGKAGALC-MDAFKIAIKSFAAAGEIKNAVGVFEMMRVHGFDDGVES 309

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           ++ L   + + G    A R F++M  +   P   +Y  ++  +  +  L  A R + DM 
Sbjct: 310 FNCLLVALAQEGLGKEAARVFDRMRDQ-YTPDLRSYTALMLAWCNARNLVEAGRVWNDML 368

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +G+  DVV +NTMI+G  R ++  EA K+F  MK K   P V +YT +I+ +    + D
Sbjct: 369 EKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLD 428

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A+R F+EM+    +P   TYT LL G  +A +M  V  +L EM ++  PP D   +  L
Sbjct: 429 MAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPP-DGRTYNAL 487

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN-FCKAEMYDRAIKLLDKLVEKE 367
           + +       + A  + K MI   +      Y +++++ F     Y     + +++  K 
Sbjct: 488 IKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKG 547

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSK 426
           I          + +SY   I     +G+  +A  F  ++++KG+  P + +N      SK
Sbjct: 548 ICP--------DVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSK 599

Query: 427 EGNPDSAFEI---VKIMGR 442
            G PD  +E+   VK  G+
Sbjct: 600 AGKPDILYELAQKVKFTGK 618



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 88/441 (19%), Positives = 162/441 (36%), Gaps = 58/441 (13%)

Query: 182 RFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           RFF+    S       VTY  M++   + ++ +    L  EM +      + ++   IK 
Sbjct: 223 RFFQWAAASDEFEHTPVTYCKMLHILGKARQFETMVALVQEMGKAGAL-CMDAFKIAIKS 281

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           + A     +A+ +F+ M+         ++  LL  L   G   E  +V   M ++Y P  
Sbjct: 282 FAAAGEIKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQYTP-- 339

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+   C + +L  A  V   M                               L
Sbjct: 340 DLRSYTALMLAWCNARNLVEAGRVWNDM-------------------------------L 368

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNN 419
           +K ++ ++++            +N MI  L    +  +A   F  +  KG    V  +  
Sbjct: 369 EKGMKPDVVV------------HNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTM 416

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LIR H K+G  D A    + M   G   +   Y CL+  Y            L+ M + G
Sbjct: 417 LIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKG 476

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    + ++++ L        A R+ K M+ KG++  +     ++++  + G    A+
Sbjct: 477 CPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGR-NYAM 535

Query: 540 GRI--DLMMQSGSVPNFDSLLSVLS---EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           G    + M + G  P+ +S    ++     G+   A K L+  + +        Y K   
Sbjct: 536 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAA 595

Query: 595 ALLAAGKTLNAYSILFKIMEK 615
               AGK      IL+++ +K
Sbjct: 596 DFSKAGKP----DILYELAQK 612



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 119/267 (44%), Gaps = 13/267 (4%)

Query: 397 GKAEIF------FRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           GKA  F       +++ K G L   AF   I+  +  G   +A  + ++M   G     +
Sbjct: 249 GKARQFETMVALVQEMGKAGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRVHGFDDGVE 308

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           ++ CL+ +  ++G   +A    D M  D ++P    + ++M +      +  A RV   M
Sbjct: 309 SFNCLLVALAQEGLGKEAARVFDRM-RDQYTPDLRSYTALMLAWCNARNLVEAGRVWNDM 367

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
           +EKG+K ++ +   +++ LL      EA+   +LM   G  PN   +  L+    ++GK 
Sbjct: 368 LEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKL 427

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A++  +      C  ++A+Y  +L     A +     ++L ++ +KG   D ++ + L
Sbjct: 428 DMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNAL 487

Query: 628 IAGLNQEGNTKQADILSRMIRGEMSRG 654
           I  L    N    D   R+ +  +++G
Sbjct: 488 IKLLT---NRNMPDDAVRIYKKMITKG 511


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 162/684 (23%), Positives = 292/684 (42%), Gaps = 61/684 (8%)

Query: 15  RALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + LVP +  +NL+ + L   K  E A      +   GLF  D   +  +I+ L +    +
Sbjct: 274 KGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLF-ADNVAYSILIDGLLKGRNAD 332

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  ++ +M   G   D  M++  I    K+G ++++  +FD M   GV    ++Y +L 
Sbjct: 333 AANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLI 392

Query: 134 KLILR--------------RGRYMMAKRY------------------FN---KMLSEGIE 158
           +   R              + R ++   Y                  +N   +M + G  
Sbjct: 393 EGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCR 452

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P    Y  ++  F    +   A+R  ++M+ +GI+ D   YN++I G ++ KKMDEA   
Sbjct: 453 PNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSF 512

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM E   +P   +Y   I GY+       A +   EM    V PN V  T L+   C 
Sbjct: 513 LLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCK 572

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            GK++E     R MVE+ I   D   +  L+    K+G +N A ++   M    I  +  
Sbjct: 573 KGKVIEACSAFRSMVEQGI-LGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            YG LI+ F K     +A  + D++V        Q+ L      YN ++   C +G+  K
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMV--------QAGLTSNVIIYNMLLGGFCRSGEIEK 683

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A+    ++  KG   + V +  +I G+ K G+   AF++   M  +G+  D+  Y  L++
Sbjct: 684 AKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD 743

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS----RVMKSMVEK 513
              R  +   A T  ++  E G + +S+ F +++  +F+ G+ +  +    R+M    +K
Sbjct: 744 GCCRLNDVERAITIFETN-EKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDK 802

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAA 570
             K N      +++ L   G++E A      M ++  +P    + SLL+   + G+    
Sbjct: 803 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEM 862

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW-----KSSD 625
             + D  +      D   Y  +++A L  G T  A  +L ++  K  V D       +  
Sbjct: 863 FSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCR 922

Query: 626 KLIAGLNQEGNTKQAD-ILSRMIR 648
            L++G  + G  + A+ ++  M+R
Sbjct: 923 ALLSGFAKVGEMEVAEKVVENMVR 946



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 131/574 (22%), Positives = 252/574 (43%), Gaps = 32/574 (5%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  KG+      + +LI+   K+  ++++  +   M  +G+     +Y  L   +L+   
Sbjct: 271 MSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRN 330

Query: 142 YMMAKRYFNKMLSEG--IEPTRHTYNVMLWGFFLSL-----KLETAIRFFEDMKSRGISL 194
              A    ++M+S G  I+P       M++ +F+ +      +E A   F+ M + G++ 
Sbjct: 331 ADAANGLVHEMVSHGFSIDP-------MMYDYFICVMSKEGAMEKAKALFDGMITFGVTP 383

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
               Y ++I G+ R K + +  +L  E+K++NI  +  +Y T +KG  +    D A  I 
Sbjct: 384 GARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIV 443

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM +   +PN V YT L+       +  +  +VL+EM E+ I P D   +  L+    K
Sbjct: 444 KEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAP-DTFCYNSLIIGLSK 502

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           +  ++ A   L  M+      +A  YG  I  + +A  +  A K + +++E  +I  P  
Sbjct: 503 AKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVI--PNK 560

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
            L         +I   C  G+  +A   FR ++++G+L D   +  L+ G  K G  + A
Sbjct: 561 VL------CTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDA 614

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            EI   M  +G+  D  +Y  LI+ + + G    A +  D M++ G +    ++  ++  
Sbjct: 615 EEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGG 674

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
               G ++ A  ++  M  KG   N      I++     G + EA    D M   G VP+
Sbjct: 675 FCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPD 734

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              + +L+           A+ + +    + C    A +  +++ +   GKT     ++ 
Sbjct: 735 SFVYTTLVDGCCRLNDVERAITIFE-TNEKGCASSSAPFNALINWVFKFGKTELTTDMIN 793

Query: 611 KIM----EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++M    +K G  +  + + +I  L +EGN + A
Sbjct: 794 RLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAA 827



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 146/613 (23%), Positives = 261/613 (42%), Gaps = 77/613 (12%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLG------------------------------- 121
           +F +LI+ Y +KG + E+V +F   K L                                
Sbjct: 154 LFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYK 213

Query: 122 --VERS----VKSYDALFKLILRRGRYMMAKRYFNK---------------------MLS 154
             VER+    V+SY+ L     R G   +AK    K                     M  
Sbjct: 214 GMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSC 273

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
           +G+ P+R +YN+++ G     +LE A     +M S G+  D V Y+ +I+G  + +  D 
Sbjct: 274 KGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADA 333

Query: 215 AEKLFAEMKEK--NIEPTVISY-TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           A  L  EM     +I+P +  Y   ++    A+E+A     +FD M +F V P A  Y +
Sbjct: 334 ANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAK---ALFDGMITFGVTPGARAYAS 390

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           L+ G      + +  ++L E+ +R I     +    + G+ C SG L+ A +++K M   
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGM-CSSGDLDGAYNIVKEMGAS 449

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
                   Y  LI+ F +   +  A+++L ++ E+ I   P +        YN +I  L 
Sbjct: 450 GCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGI--APDTF------CYNSLIIGLS 501

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
              +  +A  F  ++++ G   D   +   I G+ + G   SA + VK M   GV  +  
Sbjct: 502 KAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKV 561

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
               LI  Y +KG+  +A +A  SM+E G    +  +  +M  L ++G+V  A  +   M
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
             KG+  ++     +++     G++++A    D M+Q+G   N   ++ LL      G+ 
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A +LLD   G+    +  +Y  ++D    +G    A+ +  ++  KG V D      L
Sbjct: 682 EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTL 741

Query: 628 IAGLNQEGNTKQA 640
           + G  +  + ++A
Sbjct: 742 VDGCCRLNDVERA 754



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 104/480 (21%), Positives = 183/480 (38%), Gaps = 89/480 (18%)

Query: 245 ERADDALRIF------DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           +R DD  ++       D  K  + K ++ ++ AL   LC+ G + +   V+  M+ER  P
Sbjct: 72  KRVDDPSKLLSFFNLVDSQKVTEQKLDSFSFLAL--DLCNFGSIEKAHSVVIRMIERKWP 129

Query: 299 PK-------------------------------------DNSVFM--------------- 306
                                                  D +VF+               
Sbjct: 130 VAEVWSSIVRCLREFVGKSDDRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSL 189

Query: 307 ----KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
                LL    K   L+   DV K M+  ++  +   Y +LI   C+      A  +L K
Sbjct: 190 ARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLK 249

Query: 363 LVEKEI---ILRPQSTLDMEAS-----------SYNPMIQHLCHNGQTGKAEIFFRQLMK 408
             E+E+    L     L+++ S           SYN +I  LC   +   A+    ++  
Sbjct: 250 -TEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNS 308

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA---DAYICLIESYLRKGE 464
            G+  D VA++ LI G  K  N D+A  +V  M   G   D    D +IC++    ++G 
Sbjct: 309 VGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMS---KEGA 365

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              AK   D MI  G +P +  + S++E  F +  V+    ++  + ++ +  +      
Sbjct: 366 MEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGT 425

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
            ++ +   G ++ A   +  M  SG  PN   + +L+    +K +   AV++L     + 
Sbjct: 426 AVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQG 485

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
              D   Y  ++  L  A K   A S L +++E G   D  +    I+G  + G    AD
Sbjct: 486 IAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASAD 545


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 228/491 (46%), Gaps = 11/491 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F  N+V + L        A   F  ++  G    D  T   +I+  G+ G+L+    ++ 
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP-DVVTFNSLIDGYGKCGELDEVEQLVE 247

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M + G + D   +  LI  + K G ++ +   F  MK+ GV  +V ++        + G
Sbjct: 248 EMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEG 307

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A + F +M   G+     TY  ++ G   + +L+ AI   ++M  +G+ L+VVTY 
Sbjct: 308 LVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYT 367

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +++G  + +K+ EAE +   M++  +    + YTT+I G+   + ++ AL +  EMK+ 
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            ++ +   Y AL+ GLC+  K+ E + +L +M E  + P +  ++  ++    KSG +  
Sbjct: 428 GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEP-NYIIYTTMMDACFKSGKVPE 486

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +L+ ++          Y  LI+  CKA   D AI   +K+ +          LD   
Sbjct: 487 AIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL--------GLDPNV 538

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y  ++  LC NG   +A   F +++ KG+ LD V +  L+ G+ K+GN   AF +   
Sbjct: 539 QAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAK 598

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G+  D   Y C I  +       +A+     MI  G +P  +++  ++    + G 
Sbjct: 599 MIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGN 658

Query: 500 VQTASRVMKSM 510
           ++ A  +   M
Sbjct: 659 LEEAISLQDEM 669



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 137/631 (21%), Positives = 273/631 (43%), Gaps = 69/631 (10%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM-------- 82
           H   ++ HA      + R  L+ H R    +++ +     +  H    L+D+        
Sbjct: 60  HPLPSTAHACLAAHLLARDRLYAHSRRVLSRLVAL-----RRPHLAASLVDLLHRAALAL 114

Query: 83  -PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
            P++       + + L+     +G++ ++V+    +++L V  + ++ + +   + R   
Sbjct: 115 GPRRSALAS--VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRS 172

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             + +R F ++ +    P   T+N+++       +L  A   F  MK  G   DVVT+N+
Sbjct: 173 GRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNS 228

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+GY +  ++DE E+L  EM+    +  V++Y  +I  +    R + A   F  MK   
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V  N VT++  +   C  G + E  K+  +M  R +   + + +  L+   CK+G L+ A
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT-YTCLIDGTCKAGRLDDA 347

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +L  M+R  +P     Y +L++  CK               E+++             
Sbjct: 348 IVLLDEMVRQGVPLNVVTYTVLVDGLCK---------------ERKV------------- 379

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
                           +AE   R + K GV  + + +  LI GH    N + A  ++  M
Sbjct: 380 ---------------AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G+  D   Y  LI+      +  +AK+ L  M E G  P   ++ ++M++ F+ G+V
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A  +++ +++ G + N+     +++ L   G ++EA+   + M   G  PN   + +L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  L + G    AV+L +  + +   +D   Y  +LD  L  G   +A+++  K+++ G 
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
             D       I+G        +A ++ S MI
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREVFSEMI 635



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 186/421 (44%), Gaps = 11/421 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N        E A  +F  ++R G+   +  T    ++   + G +  A  +   M
Sbjct: 261 YNALINCFCKFGRMETAYGYFAAMKREGVMA-NVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  +E  +  LI+   K G + +++ + D M + GV  +V +Y  L   + +  + 
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+     M   G+      Y  ++ G F++   E A+    +MK++G+ LD+  Y  +
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G     K+DEA+ L  +M E  +EP  I YTTM+       +  +A+ +  ++     
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +PN +TY AL+ GLC AG + E      +M +  + P +   +  L+   CK+G LN A 
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDP-NVQAYTALVDGLCKNGCLNEAV 558

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   M+   +  +   Y  L++ + K      A  L  K+++        S L ++   
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID--------SGLQLDLFC 610

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y   I   C+     +A   F +++  G+  D   +N LI  + K GN + A  +   M 
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670

Query: 442 R 442
           R
Sbjct: 671 R 671


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 207/445 (46%), Gaps = 12/445 (2%)

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           V I+  M+  GV  SV +   L   +       +      K+   G +P+  T+N ++ G
Sbjct: 124 VSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLING 183

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
             +  ++  A+   + + SRG    V T+  ++NG  +  K   A     +M E + EP 
Sbjct: 184 LCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPE 243

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V+SY+ +I         ++A+ +F  M+S  + P  VTY +L+ G+C++G+  +   + +
Sbjct: 244 VVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFK 303

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           EM+E  + P D   F  L+   CK G +  A  V   MI++++  +   Y  LI   CK+
Sbjct: 304 EMLEWNMKP-DVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKS 362

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
            ++  +  LL++++ + I  RP      +  +++  +   C  G   +A+     ++++G
Sbjct: 363 SLWKESSTLLNEMLSRNI--RP------DVVTFSIWVDVFCKKGMVSEAQSIINLMIERG 414

Query: 411 VLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
            L P  V +N+L+ G+      D A ++  IM  +G   D  +Y  LI+ Y +     +A
Sbjct: 415 -LRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEA 473

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           K   D M   G +P S    +++  L + GR   A  + K M   G   +L   + +L  
Sbjct: 474 KQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSG 533

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN 553
               GH++EAL   + + +S   PN
Sbjct: 534 FCKHGHLDEALALFEALKKSQLKPN 558



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 167/330 (50%), Gaps = 9/330 (2%)

Query: 47  ERAGLFNHDRE--------THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           E   LF H R         T+  +I  +   G+   A  +  +M +  ++ D   F +L+
Sbjct: 262 EAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILV 321

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           ++  K+G+V E++ +F  M Q+ +E  + +Y +L   + +   +  +    N+MLS  I 
Sbjct: 322 DALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIR 381

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   T+++ +  F     +  A      M  RG+  +VVTYN++++GY    +MDEA K+
Sbjct: 382 PDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKV 441

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M  K   P V+SY  +IKGY   ER D+A ++FDEM    + PN++T+T L+ GLC 
Sbjct: 442 FDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQ 501

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           AG+    +++ ++M     PP D   +  LL   CK GHL+ A  + +A+ +  +     
Sbjct: 502 AGRPYAAKELFKKMGSHGCPP-DLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHV 560

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
              IL+   CKA   + A +L   L  +E+
Sbjct: 561 ICKILLGGMCKAGKLEDAKELFSSLSIEEL 590



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 200/418 (47%), Gaps = 10/418 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI     +G + E+++  D +   G + +V ++  +   + + G+   A  +  KM+
Sbjct: 177 FNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMV 236

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
               EP   +Y++++     +  +  A+  F  M+S GIS  VVTYN++I G     +  
Sbjct: 237 ELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWK 296

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  LF EM E N++P V++++ ++          +AL +F +M    ++P+ VTY++L+
Sbjct: 297 QASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLI 356

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G+C +    E   +L EM+ R I P D   F   + V CK G ++ A  ++  MI   +
Sbjct: 357 HGVCKSSLWKESSTLLNEMLSRNIRP-DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL 415

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  L++ +C     D A K+ D +V K     P      +  SYN +I+  C +
Sbjct: 416 RPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGC--AP------DVLSYNILIKGYCKS 467

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A+  F ++  KG+  + +    LI G  + G P +A E+ K MG  G P D   Y
Sbjct: 468 ERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITY 527

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
             L+  + + G   +A    +++ +    P   + + ++  + + G+++ A  +  S+
Sbjct: 528 STLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/468 (21%), Positives = 204/468 (43%), Gaps = 13/468 (2%)

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
            + A+ +F  M        +  +N ++    R K  D    ++ +M+   +  +V + T 
Sbjct: 85  FDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTI 144

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I     +        +  ++     KP+ +T+  L+ GLC  G++VE  + L  ++ R 
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
             P   +  M + G+ CK G  +AA   +K M+ L    E   Y I+I++ CK  + + A
Sbjct: 205 YQPTVYTHTMIVNGL-CKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEA 263

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           + L   +  + I + P         +YN +I  +C++GQ  +A I F+++++  +  D V
Sbjct: 264 VDLFYHM--RSIGISPT------VVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVV 315

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            F+ L+    KEG    A  +   M +  +  D   Y  LI    +     ++ T L+ M
Sbjct: 316 TFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEM 375

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +     P    F   ++   + G V  A  ++  M+E+G++ N+     +++   +   +
Sbjct: 376 LSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQM 435

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           +EA    D+M+  G  P+   ++ L+    +  +   A +L D    +    +  ++  +
Sbjct: 436 DEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTL 495

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +  L  AG+   A  +  K+   G   D  +   L++G  + G+  +A
Sbjct: 496 ISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEA 543



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 135/245 (55%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  + +      +  +L +M  + ++ D   F + ++ + KKG+V E+  I 
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSII 407

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           ++M + G+  +V +Y++L        +   A++ F+ M+++G  P   +YN+++ G+  S
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKS 467

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +++ A + F++M  +G++ + +T+ T+I+G  +  +   A++LF +M      P +I+Y
Sbjct: 468 ERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITY 527

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           +T++ G+      D+AL +F+ +K   +KPN V    LL G+C AGK+ + +++   +  
Sbjct: 528 STLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSI 587

Query: 295 RYIPP 299
             + P
Sbjct: 588 EELQP 592



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 119/247 (48%), Gaps = 14/247 (5%)

Query: 28  NVLHGAKNSEHALQFFRWVERAGLFNH--------DRETHLKMIEILGRVGKLNHARCIL 79
           +++HG   S        W E + L N         D  T    +++  + G ++ A+ I+
Sbjct: 354 SLIHGVCKSS------LWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSII 407

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             M ++G++ +   +  L++ Y     + E+ K+FDIM   G    V SY+ L K   + 
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKS 467

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
            R   AK+ F++M  +G+ P   T+  ++ G   + +   A   F+ M S G   D++TY
Sbjct: 468 ERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITY 527

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           +T+++G+ +   +DEA  LF  +K+  ++P  +    ++ G     + +DA  +F  +  
Sbjct: 528 STLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSI 587

Query: 260 FDVKPNA 266
            +++P+ 
Sbjct: 588 EELQPDV 594



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 5/142 (3%)

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLS 562
           V+  + + G K ++     ++  L + G + EA+ ++D +M  G  P   +   +++ L 
Sbjct: 161 VLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLC 220

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW- 621
           + GKT AA+  +   +  DC  ++ SY  ++D+ L   + +N    LF  M   G++   
Sbjct: 221 KIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDS-LCKNRLVNEAVDLFYHMRSIGISPTV 279

Query: 622 KSSDKLIAGLNQEGNTKQADIL 643
            + + LI G+   G  KQA IL
Sbjct: 280 VTYNSLIYGMCNSGQWKQASIL 301


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 144/648 (22%), Positives = 288/648 (44%), Gaps = 35/648 (5%)

Query: 18  VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN-HAR 76
            P   ++++  +L    + + AL++F+  E    F    + +  ++ IL R  + + HAR
Sbjct: 56  TPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHAR 115

Query: 77  CIL-------------------LDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
            +L                   ++  K+   + D  +F  L+ +Y +   ++ ++  F+ 
Sbjct: 116 KLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNA 175

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M    V   V   + L   ++RR      +  +NKM+  GI     T +VM+       +
Sbjct: 176 MICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGR 235

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +E A  +F + K RG+ LD   Y+ +I    +    +   +L  EMKE+   P+  ++T+
Sbjct: 236 VEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTS 295

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I   VA     +ALR+ +EM +     N V  T+L+ G C  G +     +  ++ E  
Sbjct: 296 VIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDG 355

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P +   +  L+   C SG++  A+++   M    IP    +   L+  + KA +++ A
Sbjct: 356 LFP-NKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEA 414

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPV 415
            KL D+ V+  +             +YN M+  LC  G+  +A      ++ +G V + V
Sbjct: 415 SKLFDEAVDCGV---------ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVV 465

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           ++N++I GH ++GN D A  +   M  R +  +   Y  LI+   +KG+   A    D M
Sbjct: 466 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 525

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +    +P    F +++  L + G++  A   +K+ +E+G   +      I++  +  G++
Sbjct: 526 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 585

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           + AL     M + G  PN   + SL++   +  +   A+K  D    +   +D+ +Y  +
Sbjct: 586 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSAL 645

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +D         +A  + F+++E G   +    + +I+G     N + A
Sbjct: 646 IDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAA 693



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 135/596 (22%), Positives = 276/596 (46%), Gaps = 17/596 (2%)

Query: 50  GLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQE 109
           G++      H+ M+    + G++  A     +  ++GV+ D   + ++I++  KK     
Sbjct: 215 GIYGDHFTVHV-MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNL 273

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
            +++ + MK+ G   S  ++ ++    + +G  + A R   +M++ G          ++ 
Sbjct: 274 GLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMK 333

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G+     L++A+  F  +   G+  + VTY+ +I G      +++A +L+ +MK   I P
Sbjct: 334 GYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 393

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
           +V +  ++++GY+     ++A ++FDE     V  N  TY  ++  LC  GKM E   +L
Sbjct: 394 SVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLL 452

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
             MV + + P   S    +LG  C+ G+++ A+ V   M+   +      Y ILI+   K
Sbjct: 453 DNMVNQGMVPNVVSYNDMILG-HCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 511

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
               ++A+ L D+++   I     +  D    ++N +I  LC  GQ  +A    +  +++
Sbjct: 512 KGDSEKALDLFDQMLSLNI-----APTDF---TFNTIINGLCKVGQMSEARDKLKNFLEE 563

Query: 410 GVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G +   + +N+++ G  KEGN DSA  + + M   GV  +   Y  LI  + +      A
Sbjct: 564 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 623

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
               D M E G     + + ++++   +   +++A  +   ++E G+  N  +   ++  
Sbjct: 624 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 683

Query: 529 LLMRGHVEEALGRIDLMMQSGSVP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                ++E AL     M+    +P     + +L+  L ++G+ + A  L    L +  + 
Sbjct: 684 FRDLNNMEAALVWYKKMIND-RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 742

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D+ ++  +++ L   G+  NA  IL ++  K         + LIAG  +EGN K+A
Sbjct: 743 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEA 798



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 230/477 (48%), Gaps = 36/477 (7%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L+ A  +   + + G+  ++  + VLIE     G ++++ +++  MK  G+  SV + 
Sbjct: 339 GNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 398

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           ++L +  L+   +  A + F++ +  G+     TYN+M+       K++ A    ++M +
Sbjct: 399 NSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVN 457

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +G+  +VV+YN MI G+ R   MD A  +F++M  ++++P V++Y+ +I G      ++ 
Sbjct: 458 QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 517

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPP--KDNSVFM 306
           AL +FD+M S ++ P   T+  ++ GLC  G+M E +  L+  +E  +IP     NS+  
Sbjct: 518 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVD 577

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
             +    K G++++A  V + M    +      Y  LI  FCK+   D A+K  D++ EK
Sbjct: 578 GFI----KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 633

Query: 367 --EIILRPQSTL--------DMEASS-----------------YNPMIQHLCHNGQTGKA 399
             E+ +   S L        DME++                  YN MI           A
Sbjct: 634 GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAA 693

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
            +++++++   +  D   +  LI G  KEG    A ++   M  +G+  D   +  L+  
Sbjct: 694 LVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNG 753

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
              KG+  +A+  L+ M     +P+  ++ +++   F +G ++ A  +   M+++G+
Sbjct: 754 LCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 810



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 217/500 (43%), Gaps = 45/500 (9%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ------ 88
           N + AL  F  +   GLF  ++ T+  +IE     G +  A  +   M   G+       
Sbjct: 340 NLDSALNLFNKITEDGLF-PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 398

Query: 89  ------------WDED----------------MFEVLIESYGKKGIVQESVKIFDIMKQL 120
                       W+E                  + +++    K G + E+  + D M   
Sbjct: 399 NSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQ 458

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+  +V SY+ +     R+G   MA   F+ ML+  ++P   TY++++ G F     E A
Sbjct: 459 GMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKA 518

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +  F+ M S  I+    T+NT+ING  +  +M EA        E+   P+ ++Y +++ G
Sbjct: 519 LDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDG 578

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           ++     D AL ++ EM  F V PN VTYT+L+ G C + ++    K   EM E+ +   
Sbjct: 579 FIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL-EL 637

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D + +  L+   CK   + +A D+   ++ + +      Y  +I  F      + A+   
Sbjct: 638 DVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWY 697

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
            K++   I          +  +Y  +I  L   G+   A   + +++ KG++ D + F+ 
Sbjct: 698 KKMINDRI--------PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 749

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+ G   +G  ++A +I++ M R+ +      Y  LI  Y R+G   +A T  D M++ G
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809

Query: 480 HSPASSLFRSVMESLFEDGR 499
             P    +  ++   F+  R
Sbjct: 810 LVPDDVTYDILINGKFKGDR 829



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 66/120 (55%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y  L   +L+ GR + A   + +MLS+GI P   T++V++ G     +LE A +  E+M
Sbjct: 711 TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 770

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
             + ++  V+ YNT+I GY R   + EA  L  EM ++ + P  ++Y  +I G    +R+
Sbjct: 771 DRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 830


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 236/511 (46%), Gaps = 14/511 (2%)

Query: 4   RAWTTRLQNKIRALVPQ---FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           R  + RL  ++   +P    F  N+V + L        A   F  ++  G    D  T  
Sbjct: 169 RDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP-DVVTFN 227

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            +I+  G+ G+L+    ++ +M + G + D   +  LI  + K G ++ +   F  MK+ 
Sbjct: 228 SLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE 287

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           GV  +V ++        + G    A + F +M   G+     TY  ++ G   + +L+ A
Sbjct: 288 GVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDA 347

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           I   ++M  +G+ L+VVTY  +++G  + +K+ EAE +   M++  +    + YTT+I G
Sbjct: 348 IVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHG 407

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +   + ++ AL +  EMK+  ++ +   Y AL+ GLC+  K+ E + +L +M E  + P 
Sbjct: 408 HFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEP- 466

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +  ++  ++    KSG +  A  +L+ ++          Y  LI+  CKA   D AI   
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHF 526

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
           +K+ +          LD    +Y  ++  LC NG   +A   F +++ KG+ LD V +  
Sbjct: 527 NKMRDL--------GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+ G+ K+GN   AF +   M   G+  D   Y C I  +       +A+     MI  G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +P  +++  ++    + G ++ A  +   M
Sbjct: 639 IAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 137/631 (21%), Positives = 273/631 (43%), Gaps = 69/631 (10%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM-------- 82
           H   ++ HA      + R  L+ H R    +++ +     +  H    L+D+        
Sbjct: 60  HPLPSTAHACLAAHLLARDRLYAHSRRVLSRLVAL-----RRPHLAASLVDLLHRAALAL 114

Query: 83  -PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
            P++       + + L+     +G++ ++V+    +++L V  + ++ + +   + R   
Sbjct: 115 GPRRSALAS--VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRS 172

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             + +R F ++ +    P   T+N+++       +L  A   F  MK  G   DVVT+N+
Sbjct: 173 GRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNS 228

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+GY +  ++DE E+L  EM+    +  V++Y  +I  +    R + A   F  MK   
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V  N VT++  +   C  G + E  K+  +M  R +   + + +  L+   CK+G L+ A
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT-YTCLIDGTCKAGRLDDA 347

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +L  M+R  +P     Y +L++  CK               E+++             
Sbjct: 348 IVLLDEMVRQGVPLNVVTYTVLVDGLCK---------------ERKV------------- 379

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
                           +AE   R + K GV  + + +  LI GH    N + A  ++  M
Sbjct: 380 ---------------AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G+  D   Y  LI+      +  +AK+ L  M E G  P   ++ ++M++ F+ G+V
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A  +++ +++ G + N+     +++ L   G ++EA+   + M   G  PN   + +L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  L + G    AV+L +  + +   +D   Y  +LD  L  G   +A+++  K+++ G 
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
             D       I+G        +A ++ S MI
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREVFSEMI 635



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 186/421 (44%), Gaps = 11/421 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N        E A  +F  ++R G+   +  T    ++   + G +  A  +   M
Sbjct: 261 YNALINCFCKFGRMETAYGYFAAMKREGVMA-NVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  +E  +  LI+   K G + +++ + D M + GV  +V +Y  L   + +  + 
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+     M   G+      Y  ++ G F++   E A+    +MK++G+ LD+  Y  +
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G     K+DEA+ L  +M E  +EP  I YTTM+       +  +A+ +  ++     
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +PN +TY AL+ GLC AG + E      +M +  + P +   +  L+   CK+G LN A 
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDP-NVQAYTALVDGLCKNGCLNEAV 558

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   M+   +  +   Y  L++ + K      A  L  K+++        S L ++   
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID--------SGLQLDLFC 610

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y   I   C+     +A   F +++  G+  D   +N LI  + K GN + A  +   M 
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670

Query: 442 R 442
           R
Sbjct: 671 R 671


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/534 (23%), Positives = 255/534 (47%), Gaps = 23/534 (4%)

Query: 51  LFNHDRETHL--------KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYG 102
           LF+    TH+        K++  L + G +  A  +L  + ++G+  +   + + I    
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           + G + E+V++ D M+   V   V +Y+ L + + ++     A  Y  +M+++G  P   
Sbjct: 236 EAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           TYN ++ G+     ++ A    +D   +G   D VTY ++ING      ++ A +LF E 
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           + K I+P ++ Y +++KG         AL++ +EM      P+  TY  ++ GLC  G +
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 283 VEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
            +   V+ + + + Y+P  D   F  L+   CK   L++A  +++ M    I  +   Y 
Sbjct: 415 SDATVVMNDAIMKGYLP--DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 472

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            ++   CKA   +   +   +++ K     P         +YN +I++ C + +  +A  
Sbjct: 473 SVLNGLCKAGKVNEVNETFQEMILKGCHPNP--------ITYNILIENFCRSNKMEEASK 524

Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
              ++ ++G+  D V+FN LI G  + G+ + A+ + + +  +G    AD +  LI ++ 
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 584

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
            K     A+   D M+  GH   S  +R +++   +   V  A   +  M++KG   ++ 
Sbjct: 585 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 644

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
              +++ +L +   V +A+G I +M++ G VP  + + ++L+   K IAA K+L
Sbjct: 645 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP--EVVDTILNADKKEIAAPKIL 696



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 132/615 (21%), Positives = 249/615 (40%), Gaps = 74/615 (12%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++   I +Y + G ++++V  F+ M       +  +Y+A+   ++    +  A + + +M
Sbjct: 55  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L+ G+ P  HT+ + L  F L+ +   A+R    +  RG     V Y T++ G       
Sbjct: 115 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT 170

Query: 213 DEAEKLFAEMKEKNIEP-----------------------------------TVISYTTM 237
            +A +LF +M   ++ P                                    + +Y   
Sbjct: 171 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 230

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I+G     R  +A+R+ D M+++ V P+ VTY  L+ GLC      E    LR M+ +  
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLK-AMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
            P D+  +  ++   CK   +  A ++LK A+ +  +P +   Y  LI   C     +RA
Sbjct: 290 LP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVT-YCSLINGLCAEGDVERA 347

Query: 357 IKLLDK-------------------LVEKEIILRPQSTLDMEA--------SSYNPMIQH 389
           ++L ++                   L  + +IL     ++  A         +YN +I  
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407

Query: 390 LCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC  G    A +     + KG L D   FN LI G+ K    DSA ++V+ M   G+  D
Sbjct: 408 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 467

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  ++    + G+  +       MI  G  P    +  ++E+     +++ AS+V+ 
Sbjct: 468 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 527

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKG 565
            M ++G+  +      ++      G +E A     +++    S +   F++L+   S K 
Sbjct: 528 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 587

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
               A K+ D  L +    D  +Y  ++D          AY  L ++++KG +    +  
Sbjct: 588 NMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFG 647

Query: 626 KLIAGLNQEGNTKQA 640
           ++I  L       QA
Sbjct: 648 RVINSLTVNHRVFQA 662



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 197/446 (44%), Gaps = 17/446 (3%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A+ + R +   G    D  T+  +I+   ++  +  A  +L D   KG   D+  +  
Sbjct: 275 QEAMHYLRRMMNQGCLPDDF-TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 333

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI     +G V+ ++++F+  +  G++  +  Y++L K +  +G  + A +  N+M  EG
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P   TYN+++ G      +  A     D   +G   DV T+NT+I+GY +  K+D A 
Sbjct: 394 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 453

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +L   M E  I P  I+Y +++ G     + ++    F EM      PN +TY  L+   
Sbjct: 454 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 513

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C + KM E  KV+ +M +  + P D   F  L+   C++G L  A  + + +        
Sbjct: 514 CRSNKMEEASKVIVKMSQEGLHP-DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 572

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
           A  +  LI  F        A K+ D+++ K            ++ +Y  +I   C     
Sbjct: 573 ADTFNTLIGAFSGKLNMHMAEKIFDEMLSK--------GHRADSYTYRVLIDGSCKTANV 624

Query: 397 GKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYIC 454
            +A +   +++KKG +  ++ F  +I   +       A  I+ IM + G VP   D  + 
Sbjct: 625 DRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTIL- 683

Query: 455 LIESYLRKGEPADAKTALDSMIEDGH 480
                  K E A  K  ++ +++ GH
Sbjct: 684 ----NADKKEIAAPKILVEDLMKKGH 705



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/521 (20%), Positives = 212/521 (40%), Gaps = 52/521 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT-YNVMLWGFFLSLKLETAIRF 183
           +V +Y AL + +   GR            S     T H  Y   +  +  + +L  A+  
Sbjct: 16  TVPAYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDA 75

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           FE M           YN +++        D+A K++  M    + P + ++T  ++ +  
Sbjct: 76  FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 135

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             R   ALR+   +        AV Y  ++ GL   G   + +++  +M+  ++ P + +
Sbjct: 136 TARPHIALRLLRALP----HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFP-NLA 190

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            F K+L   CK G      DVL+A +                             LL K+
Sbjct: 191 AFNKVLHALCKRG------DVLEAGL-----------------------------LLGKV 215

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRG 423
           +        Q  + +   +YN  I+ LC  G+  +A      +    V D V +N LIRG
Sbjct: 216 I--------QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRG 267

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K+  P  A   ++ M  +G   D   Y  +I+ Y +     +A   L   +  G  P 
Sbjct: 268 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 327

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + S++  L  +G V+ A  +      KG+K ++ +   +++ L ++G +  AL  ++
Sbjct: 328 QVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 387

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M + G  P+   ++ +++ L + G    A  +++  + +  + D+ ++  ++D      
Sbjct: 388 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 447

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           K  +A  ++ ++ E G   D  + + ++ GL + G   + +
Sbjct: 448 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 488



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/420 (21%), Positives = 167/420 (39%), Gaps = 49/420 (11%)

Query: 227 IEPTVIS--YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
           + P  I   Y   I+ Y    R  DA+  F+ M  F   P A  Y A++  L DA    +
Sbjct: 47  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 106

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             KV   M+   + P  ++  ++L    C +   + A  +L+A+          +  ++ 
Sbjct: 107 AHKVYVRMLAAGVSPDLHTHTIRLRSF-CLTARPHIALRLLRALPHRG---AVAYCTVVC 162

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             +     +D A +L D+++   +   P        +++N ++  LC  G   +A +   
Sbjct: 163 GLYAHGHTHD-ARQLFDQMLHTHVF--PN------LAAFNKVLHALCKRGDVLEAGLLLG 213

Query: 405 QLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++++G+ ++   +N  IRG  + G    A  +V  M    VP D   Y  LI    +K 
Sbjct: 214 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKS 272

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
            P +A   L  M+  G  P    + ++++   +   VQ A+ ++K  V KG   +     
Sbjct: 273 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 332

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
            ++  L   G VE AL   +     G  P                               
Sbjct: 333 SLINGLCAEGDVERALELFNEAQAKGIKP------------------------------- 361

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            D+  Y  ++  L   G  L+A  ++ ++ E+G   D ++ + +I GL + GN   A ++
Sbjct: 362 -DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 146/623 (23%), Positives = 279/623 (44%), Gaps = 51/623 (8%)

Query: 33  AKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE 91
           ++N E A  F+R  +E     N    + L  +E   ++ K   A  +L  M K+G  ++ 
Sbjct: 85  SRNHELAFSFYRKMLETDTFINFVSLSGL--LECYVQMRKTGFAFGVLALMLKRGFAFNV 142

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
               +L++   +     ++V +   M++  +   V SY+ + +          A    N+
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M   G   +  T+ +++  F  + K++ A+ F ++MK  G+  D+V Y ++I G+    +
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           +D  + LF E+ E+   P  I+Y T+I+G+  + +  +A  IF+ M    V+PN  TYT 
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIR 330
           L+ GLC  GK  E  ++L  M+E+   P  N+V +  ++   CK G +  A ++++ M +
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEP--NAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
                +   Y IL+   C     D A KLL       ++L+  S  D +  SYN +I  L
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLL------YLMLKDSSYTDPDVISYNALIHGL 434

Query: 391 CHNGQTGKAEIFFRQLMKK-GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C   +  +A   +  L++K G  D V  N L+    K G+ + A E+ K +    + R++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 450 DAYI-----------------------------------CLIESYLRKGEPADAKTALDS 474
           D Y                                    CL+ S  ++G    A    + 
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M  D + P    F  +++   + G +++A  ++  M   G+  +L   +K++   L  G+
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           ++EA+   D M+ SG  P+    DS+L     +G+T    +L+   + +D ++D      
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT 674

Query: 592 VLDALLAAGKTLNAYSILFKIME 614
           V+D +  +   ++    L ++ +
Sbjct: 675 VMDYMCNSSANMDLAKRLLRVTD 697



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 238/544 (43%), Gaps = 46/544 (8%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           ++HN++   L        A+   R + R  L   D  ++  +I       +L  A  +  
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLM-PDVFSYNTVIRGFCEGKELEKALELAN 201

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G  W    + +LI+++ K G + E++     MK +G+E  +  Y +L +     G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                K  F+++L  G  P   TYN ++ GF    +L+ A   FE M  RG+  +V TY 
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G     K  EA +L   M EK+ EP  ++Y  +I          DA+ I + MK  
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE--RYIPP-------------KDNSVF 305
             +P+ +TY  LL GLC  G + E  K+L  M++   Y  P             K+N + 
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441

Query: 306 MK---------------------LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
                                  LL    K+G +N A ++ K +    I   +  Y  +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + FCK  M + A  LL K+   E  L+P S  D     YN ++  LC  G   +A   F 
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSE--LQP-SVFD-----YNCLLSSLCKEGSLDQAWRLFE 553

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           ++ +     D V+FN +I G  K G+  SA  ++  M R G+  D   Y  LI  +L+ G
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              +A +  D M++ G  P + +  SV++     G     + ++K +V+K +  + +L  
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTC 673

Query: 524 KILE 527
            +++
Sbjct: 674 TVMD 677



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/470 (23%), Positives = 204/470 (43%), Gaps = 24/470 (5%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +L+ A+  F+     G SL     N ++    R +  + A   + +M E +     +S +
Sbjct: 53  QLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC---DAGKMVEVQKVLREM 292
            +++ YV + +   A  +   M       N   +  LL GLC   + GK V    +LREM
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVS---LLREM 168

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
               + P   S    + G  C+   L  A ++   M           +GILI+ FCKA  
Sbjct: 169 RRNSLMPDVFSYNTVIRGF-CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            D A+  L     KE+       L+ +   Y  +I+  C  G+  + +  F +++++G  
Sbjct: 228 MDEAMGFL-----KEMKFMG---LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD- 278

Query: 413 DPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            P A  +N LIRG  K G    A EI + M  RGV  +   Y  LI+     G+  +A  
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L+ MIE    P +  +  ++  L +DG V  A  +++ M ++  + +      +L  L 
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398

Query: 531 MRGHVEEALGRIDLMMQSGS-----VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
            +G ++EA   + LM++  S     V ++++L+  L ++ +   A+ + D  + +    D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             +   +L++ L AG    A  +  +I +   V +  +   +I G  + G
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 204/429 (47%), Gaps = 14/429 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + LV  +    K +E  L   + VE     N    T+  ++ ++ + G+   A  +L  M
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNA--VTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ ++ D   + ++I+   K G +  +  +F+ M+  G+  ++ +Y+ L       GR+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
               +    M+   I P   T++V++  F    KL  A    ++M  RGI+ D +TY ++
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G+ +   +D+A ++   M  K  +P + ++  +I GY    R DD L +F +M    V
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSGHLNAA 321
             + VTY  L+ G C+ GK+   +++ +EMV R +PP  N V  K LL   C +G    A
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP--NIVTYKILLDGLCDNGESEKA 492

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            ++ + + +  +  + G Y I+I   C A   D A  L   L        P   +     
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL--------PLKGVKPGVK 544

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN MI  LC  G   +AE+ FR++ + G   D   +N LIR H  +G+   + ++++ +
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604

Query: 441 GRRGVPRDA 449
            R G   DA
Sbjct: 605 KRCGFSVDA 613



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 236/543 (43%), Gaps = 30/543 (5%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D + +++ +   K  +  L   + +E  G+  H+  T   MI    R  KL  
Sbjct: 83  RPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI-AHNLYTLSIMINCFCRCRKLCL 141

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A   +  + K G + +   F  LI     +G V E++++ D M ++G +  + + + L  
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            +   G+   A    +KM+  G +P   TY  +L     S +   A+     M+ R I L
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D V Y+ +I+G  +   +D A  LF EM+ K I   +I+Y  +I G+    R DD  ++ 
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            +M    + PN VT++ L+      GK+ E +++ +EM+ R I P D   +  L+   CK
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP-DTITYTSLIDGFCK 380

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII----- 369
             HL+ A  ++  M+          + ILI  +CKA   D  ++L  K+  + ++     
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440

Query: 370 -------------LRPQSTLDMEASS---------YNPMIQHLCHNGQTGKA-EIFFRQL 406
                        L     L  E  S         Y  ++  LC NG++ KA EIF +  
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
             K  LD   +N +I G       D A+++   +  +GV      Y  +I    +KG  +
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A+     M EDGH+P    +  ++ +   DG    + ++++ +   G   +   +  ++
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620

Query: 527 EAL 529
           + L
Sbjct: 621 DML 623



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 210/461 (45%), Gaps = 13/461 (2%)

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           +LG E +  ++  L   +   GR   A    ++M+  G +P   T N ++ G  LS K  
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+   + M   G   + VTY  ++N   +  +   A +L  +M+E+NI+   + Y+ +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G       D+A  +F+EM+   +  N +TY  L+ G C+AG+  +  K+LR+M++R I 
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +   F  L+    K G L  A ++ K MI   I  +   Y  LI+ FCK    D+A +
Sbjct: 331 P-NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
           ++D +V K          D    ++N +I   C   +       FR++  +GV+ D V +
Sbjct: 390 MVDLMVSK--------GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI+G  + G  + A E+ + M  R VP +   Y  L++     GE   A    + + +
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
                   ++  ++  +    +V  A  +  S+  KGVK  +     ++  L  +G + E
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           A      M + G  P+   ++ L+      G    +VKL++
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 225/503 (44%), Gaps = 17/503 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F  M+     PT   ++ +      + + +  +   + M+ +GI+ ++ T + MIN + R
Sbjct: 76  FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 135

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
            +K+  A     ++ +   EP  I+++T+I G     R  +AL + D M     KP+ +T
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKA 327
              L+ GLC +GK  E   ++ +MVE    P  N+V +  +L V CKSG    A ++L+ 
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQP--NAVTYGPVLNVMCKSGQTALAMELLRK 253

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M   +I  +A  Y I+I+  CK    D A  L +++  K I             +YN +I
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT--------TNIITYNILI 305

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
              C+ G+        R ++K+ + +P  V F+ LI    KEG    A E+ K M  RG+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKI-NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  LI+ + ++     A   +D M+  G  P    F  ++    +  R+     
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           + + M  +GV  +      +++     G +  A      M+     PN   +  LL  L 
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           + G++  A+++ +        +D+  Y  ++  +  A K  +A+ +   +  KG     K
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544

Query: 623 SSDKLIAGLNQEGNTKQADILSR 645
           + + +I GL ++G   +A++L R
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFR 567



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 194/435 (44%), Gaps = 15/435 (3%)

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           K D+A  LF +M      PTVI ++ +       ++ D  L +  +M+   +  N  T +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            ++   C   K+      + ++++    P +   F  L+   C  G ++ A +++  M+ 
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEP-NTITFSTLINGLCLEGRVSEALELVDRMVE 186

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
           +    +      L+   C +     A+ L+DK+VE     +P       A +Y P++  +
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC--QPN------AVTYGPVLNVM 238

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C +GQT  A    R++ ++ + LD V ++ +I G  K G+ D+AF +   M  +G+  + 
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  LI  +   G   D    L  MI+   +P    F  +++S  ++G+++ A  + K 
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M+ +G+  +      +++      H+++A   +DLM+  G  PN   F+ L++   +  +
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
               ++L      R  + D  +Y  ++      GK LN    LF+ M    V     + K
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-LNVAKELFQEMVSRKVPPNIVTYK 477

Query: 627 -LIAGLNQEGNTKQA 640
            L+ GL   G +++A
Sbjct: 478 ILLDGLCDNGESEKA 492



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 35/260 (13%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+   +   L+ A  ++  M  KG   +   F +LI  Y K   + + +++F
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   GV     +Y+ L +     G+  +AK  F +M+S  + P   TY ++L G   +
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486

Query: 175 LKLETAIRFFEDMKSRGISLD-----------------------------------VVTY 199
            + E A+  FE ++   + LD                                   V TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N MI G  +   + EAE LF +M+E    P   +Y  +I+ ++    A  ++++ +E+K 
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606

Query: 260 FDVKPNAVTYTALLPGLCDA 279
                +A T   ++  L D 
Sbjct: 607 CGFSVDASTIKMVIDMLSDG 626


>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
          Length = 637

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 213/439 (48%), Gaps = 17/439 (3%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEH-ALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           L+  + AL P     +V  VLH  K++   + +FFRW   +G F H   T+ KM+ ILG+
Sbjct: 179 LEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLLILGK 238

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
             +      +L +M K G     D F+V I+S+   G ++ +V +F++M++ G +  V+S
Sbjct: 239 TRQFESMVALLQEMGKAGT-LSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVES 297

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           ++ L   +   G    A++ F+KML +   P   +Y  ++  +  +  L  A R + +M 
Sbjct: 298 FNCLLVALANEGLGREARQVFDKMLGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEML 356

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +G+  DVV +NTMI G  R ++  EA K+F  MK K   P V +YT +I  +    + D
Sbjct: 357 EKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMD 416

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A+  F+EM+    +P+  TYT LL G  +A +M  V  VL EM ++  PP D   +  L
Sbjct: 417 MAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPP-DARTYNAL 475

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN-FCKAEMYDRAIKLLDKLVEKE 367
           + +       + AA + K MI+  +      Y +++++ F     Y     + +++  + 
Sbjct: 476 IKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRG 535

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSK 426
           I          + +SY   I     +G+  +A  +  +++ KG+  P +  N      SK
Sbjct: 536 IC--------PDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCNKFAADLSK 587

Query: 427 EGNPDSAFEI---VKIMGR 442
            G  D  +E+   VK  G+
Sbjct: 588 AGKLDMLYELAQKVKFAGK 606



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 117/256 (45%), Gaps = 7/256 (2%)

Query: 402 FFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
             +++ K G L   AF   I+  +  G   +A  + ++M + G     +++ CL+ +   
Sbjct: 248 LLQEMGKAGTLSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAN 307

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
           +G   +A+   D M+   +SP    + ++M +      +  A RV   M+EKG+K ++ +
Sbjct: 308 EGLGREARQVFDKMLGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVV 366

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL 578
              ++E LL      EA+   +LM   G  PN   +  L+    ++GK   A++  +   
Sbjct: 367 HNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQ 426

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
              C  D+A+Y  +L     A +     ++L ++ +KG   D ++ + LI  L    N K
Sbjct: 427 EARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLT---NRK 483

Query: 639 QADILSRMIRGEMSRG 654
             D  +R+ +  + +G
Sbjct: 484 MPDDAARIYKKMIKKG 499



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/384 (19%), Positives = 143/384 (37%), Gaps = 49/384 (12%)

Query: 182 RFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           RFF     S G +   +TY  M+    + ++ +    L  EM +     ++ ++   IK 
Sbjct: 211 RFFRWATASGGFTHTTITYCKMLLILGKTRQFESMVALLQEMGKAGTL-SMDAFKVAIKS 269

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           + A     +A+ +F+ M+         ++  LL  L + G   E ++V  +M+ +Y P  
Sbjct: 270 FAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQYSP-- 327

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+   C + +L  A  V   M+   +  +   +  +IE   + +    A+K+ 
Sbjct: 328 DLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMF 387

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           +                M+A    P +                             +  L
Sbjct: 388 EL---------------MKAKGPPPNVW---------------------------TYTML 405

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I  H K G  D A E  + M       D   Y CL+  Y            L+ M + G 
Sbjct: 406 ICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGC 465

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P +  + ++++ L        A+R+ K M++KG+   +     ++++  + G    A+G
Sbjct: 466 PPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFL-GDRNYAMG 524

Query: 541 RI--DLMMQSGSVPNFDSLLSVLS 562
               + M + G  P+ +S    +S
Sbjct: 525 CAVWEEMHRRGICPDVNSYTVFIS 548


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 217/484 (44%), Gaps = 15/484 (3%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R G+L      L +M   G   D      LI  + + G  +++ KI +I++  G    V 
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ +     + G    A    ++M    + P   TYN +L     S KL+ A+   + M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
             R    DV+TY  +I    R   +  A KL  EM+++   P V++Y  ++ G     R 
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           D+A++  ++M S   +PN +T+  +L  +C  G+ ++ +K+L +M+ +   P     F  
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV-VTFNI 349

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   C+ G L  A D+L+ M +      +  Y  L+  FCK +  DRAI+ L+++V + 
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHS 425
               P      +  +YN M+  LC +G+   A     QL  KG   PV   +N +I G +
Sbjct: 410 CY--P------DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC-SPVLITYNTVIDGLA 460

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K G    A +++  M  + +  D   Y  L+    R+G+  +A          G  P + 
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            F S+M  L +  +   A   +  M+ +G K N      ++E L   G  +EAL  ++ +
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580

Query: 546 MQSG 549
              G
Sbjct: 581 CNKG 584



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 226/507 (44%), Gaps = 42/507 (8%)

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
           E +E   H   ++  G     +LE   +F E+M   G   D++   T+I G+ R  K  +
Sbjct: 101 EDVESNNHLRQMVRTG-----ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRK 155

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A K+   ++     P VI+Y  MI GY      ++AL + D M    V P+ VTY  +L 
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILR 212

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
            LCD+GK+ +  +VL  M++R   P D   +  L+   C+   +  A  +L  M      
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYP-DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKL---------VEKEIILRPQST----LDME-- 379
            +   Y +L+   CK    D AIK L+ +         +   IILR   +    +D E  
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331

Query: 380 ------------ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
                         ++N +I  LC  G  G+A     ++ + G   + +++N L+ G  K
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           E   D A E ++ M  RG   D   Y  ++ +  + G+  DA   L+ +   G SP    
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           + +V++ L + G+   A +++  M  K +K +    + ++  L   G V+EA+       
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
           + G  PN   F+S++  L +  +T  A+  L F + R C  +  SY  +++ L   G   
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAG 630
            A  +L ++  KG +   KSS + +AG
Sbjct: 572 EALELLNELCNKGLMK--KSSAEQVAG 596



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 163/332 (49%), Gaps = 2/332 (0%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
           HA++    +   G    D  T+  ++  + + G+L+ A   L DMP  G Q +     ++
Sbjct: 257 HAMKLLDEMRDRGC-TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           + S    G   ++ K+   M + G   SV +++ L   + R+G    A     KM   G 
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
           +P   +YN +L GF    K++ AI + E M SRG   D+VTYNTM+    +  K+++A +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           +  ++  K   P +I+Y T+I G     +   A+++ DEM++ D+KP+ +TY++L+ GL 
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             GK+ E  K   E     I P   +    +LG+ CKS   + A D L  MI        
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL-CKSRQTDRAIDFLVFMINRGCKPNE 554

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
             Y ILIE      M   A++LL++L  K ++
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 188/432 (43%), Gaps = 45/432 (10%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L   GKL  A  +L  M ++    D   + +LIE+  +   V  ++K+ 
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M+  G    V +Y+ L   I + GR   A ++ N M S G +P   T+N++L     +
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +   A +   DM  +G S  VVT+N +IN   R   +  A  +  +M +   +P  +SY
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G+   ++ D A+   + M S    P+ VTY  +L  LC  GK+ +  ++L ++  
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           +   P    V +                                 Y  +I+   KA    
Sbjct: 443 KGCSP----VLIT--------------------------------YNTVIDGLAKAGKTG 466

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
           +AIKLLD++  K+  L+P +       +Y+ ++  L   G+  +A  FF +  + G+  +
Sbjct: 467 KAIKLLDEMRAKD--LKPDTI------TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V FN+++ G  K    D A + +  M  RG   +  +Y  LIE    +G   +A   L+
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578

Query: 474 SMIEDGHSPASS 485
            +   G    SS
Sbjct: 579 ELCNKGLMKKSS 590



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/452 (22%), Positives = 194/452 (42%), Gaps = 51/452 (11%)

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
           +L+ V  N  +    R  +++E  K    M      P +I  TT+I+G+  + +   A +
Sbjct: 99  ALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAK 158

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           I + ++     P+ +TY  ++ G C                                   
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYC----------------------------------- 183

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
            K+G +N A  VL    R+S+  +   Y  ++ + C +    +A+++LD++++++    P
Sbjct: 184 -KAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY--P 237

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPD 431
                 +  +Y  +I+  C +   G A     ++  +G   D V +N L+ G  KEG  D
Sbjct: 238 ------DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A + +  M   G   +   +  ++ S    G   DA+  L  M+  G SP+   F  ++
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
             L   G +  A  +++ M + G + N      +L        ++ A+  ++ M+  G  
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P+   ++++L+ L + GK   AV++L+    + C   L +Y  V+D L  AGKT  A  +
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           L ++  K    D  +   L+ GL++EG   +A
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 145/325 (44%), Gaps = 37/325 (11%)

Query: 15  RALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R   P    +N++ N +      + A++F   +  +G    +  TH  ++  +   G+  
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWM 326

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +L DM +KG       F +LI    +KG++  ++ I + M Q G + +  SY+ L 
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
               +  +   A  Y  +M+S G  P   TYN ML       K+E A+     + S+G S
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
             ++TYNT+I+G  +  K  +A KL  EM+ K+++P  I+Y++++ G     + D+A++ 
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506

Query: 254 FDEMKSFDVKPNAVT-----------------------------------YTALLPGLCD 278
           F E +   ++PNAVT                                   YT L+ GL  
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566

Query: 279 AGKMVEVQKVLREMVERYIPPKDNS 303
            G   E  ++L E+  + +  K ++
Sbjct: 567 EGMAKEALELLNELCNKGLMKKSSA 591


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 146/609 (23%), Positives = 263/609 (43%), Gaps = 33/609 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+FF+W      F H  E++  ++ ++ R      A               + + EV++
Sbjct: 146 ALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAH--------------DTVKEVIM 191

Query: 99  ESYGKKGIVQESVKIFDIM---KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            S    G       IFD++   + + V  S   +D LF + +  G    A   F++M + 
Sbjct: 192 NSRMDMGF--PVCNIFDMLWSTRNICVSGS-GVFDVLFSVFVELGLLEEANECFSRMRNF 248

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
              P   + N +L     S   +   +FF DM   GI+  V TYN MI+   +   ++ +
Sbjct: 249 RTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENS 308

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            +LF +M+E  + P V++Y ++I GY  V   ++   +F+EMK     P+ +TY  L+  
Sbjct: 309 RRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINC 368

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            C   KM    +   EM    + P +   +  L+   CK G +  A  +   M R  +  
Sbjct: 369 YCKFEKMPRAFEYFSEMKNNGLKP-NVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLP 427

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  LI+  CKA     A KLL+ ++        Q+ + +   +Y  ++  LC  G+
Sbjct: 428 NEFTYTSLIDANCKAGNLTEAWKLLNDML--------QAGVKLNIVTYTALLDGLCKAGR 479

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +AE  FR ++K G+  +   +  L+ G+ K    + A +I+K M    +  D   Y  
Sbjct: 480 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGS 539

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I  +  + +  + K  L+ M   G S    +  +++++ F+ G+   A    + M + G
Sbjct: 540 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 599

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           V+  +     +++ L   G VE A+     M+  G  PN   + SL+  L +     +A 
Sbjct: 600 VEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAK 659

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           KL D    R    D+ ++  ++D  L  G    A  ++ ++ E     D      L++G 
Sbjct: 660 KLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 719

Query: 632 NQEGNTKQA 640
           +Q G   QA
Sbjct: 720 SQCGELHQA 728



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 245/537 (45%), Gaps = 20/537 (3%)

Query: 8   TRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILG 67
           +R++N  R L      N + + L  + N +   +FF  +  AG+      T+  MI+ L 
Sbjct: 243 SRMRN-FRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGI-APSVFTYNVMIDYLC 300

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + G L ++R + + M + G+  D   +  LI+ YGK G ++E   +F+ MK +G    + 
Sbjct: 301 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 360

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L     +  +   A  YF++M + G++P   TY+ ++  F     ++ AI+ F DM
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           +  G+  +  TY ++I+   +   + EA KL  +M +  ++  +++YT ++ G     R 
Sbjct: 421 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 480

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +A  +F  M    + PN   YTAL+ G   A +M +  K+L++M E  I P D  ++  
Sbjct: 481 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP-DLILYGS 539

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL---- 363
           ++   C    L     +L+ M    I         +I+ + KA     A+    ++    
Sbjct: 540 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 599

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIR 422
           VE  I+            +Y  +I  LC  G    A  +F +++  G+   VA + +LI 
Sbjct: 600 VEATIV------------TYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 647

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  K    +SA ++   M  RG+  D  A+  LI+  L+ G   +A   +  M E     
Sbjct: 648 GLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 707

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
              ++ S++    + G +  A +    M+EKG+     L   +L     RG ++EA+
Sbjct: 708 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 764



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 203/424 (47%), Gaps = 11/424 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N     +    A ++F  ++  GL   +  T+  +I+   + G +  A  + +DM
Sbjct: 362 YNGLINCYCKFEKMPRAFEYFSEMKNNGL-KPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G+  +E  +  LI++  K G + E+ K+ + M Q GV+ ++ +Y AL   + + GR 
Sbjct: 421 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 480

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
           + A+  F  ML +GI P +  Y  ++ G+  + ++E A++  + M    I  D++ Y ++
Sbjct: 481 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 540

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G+   +K++E + +  EMK + I    +  TT+I  Y    ++ DAL  F EM+   V
Sbjct: 541 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 600

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +   VTY  L+ GLC AG +         M+   + P + +V+  L+   CK+  + +A 
Sbjct: 601 EATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQP-NVAVYTSLIDGLCKNNCIESAK 659

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   M    +  +   +  LI+   K      A+ L+ ++ E  I        + +   
Sbjct: 660 KLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAI--------EFDLHV 711

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  ++      G+  +A  FF ++++KG+L + V    L+R + K G  D A E+   M 
Sbjct: 712 YTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 771

Query: 442 RRGV 445
           R G+
Sbjct: 772 RMGL 775



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 1/162 (0%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A+ +F  +   GL   +   +  +I+ L +   +  A+ +  +M  +G+  D   F  
Sbjct: 621 ELAVDYFCRMLSLGL-QPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTA 679

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI+   K G +QE++ +   M +L +E  +  Y +L     + G    A+++FN+M+ +G
Sbjct: 680 LIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 739

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           I P       +L  ++   +L+ AI    +M+  G+  +  T
Sbjct: 740 ILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 157/719 (21%), Positives = 295/719 (41%), Gaps = 109/719 (15%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
             ++++ + L   +  + A + F+ ++  G+   D  ++  +I      GK   A+C+  
Sbjct: 166 ISYSIIIDGLCKDRREDEARELFKEMKAQGMMP-DVISYTSLIHGFCHSGKWEKAKCLFN 224

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G+Q D     VLI+ + K+G V E+ ++ ++M   G    + +Y  L K +  + 
Sbjct: 225 EMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKH 284

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS----------- 189
           R   A + F  M   G  P    Y  ++ G   + K+  A+   ++M +           
Sbjct: 285 RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIR 344

Query: 190 -------------------------------RGISLDVVTYNTMINGYNRFKKMDEAEKL 218
                                          RG  LD+VTY+T+I G     ++ EA  L
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS------FDVKPNAVTYTAL 272
           F  M++    P  I+Y T++KG       + AL++  EM +         KP  ++Y+ +
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GLC   +  E +++  EM  + I P D   +  L+   C SG    A  +   M+ + 
Sbjct: 465 IDGLCKDRREDEARELFEEMKAQGIMP-DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I  +     +LI+  CK      A KLL+ ++++  IL        +  +   +++ LC 
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIL--------DVVTCTTLVKGLCM 575

Query: 393 NGQTGKAEIFFRQLMKKGVL---------------------------------------- 412
             +  KA   F ++ K G +                                        
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635

Query: 413 --DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             + ++++ +I G  K G  D A E+ K M   GV  D  +Y  LI  + R G+  DAK 
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
             + M++ G  P  + F  +++ L ++G+V  A+ +++ M+++G   N      +++ L 
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL------GRD 581
           M   + EA      M + G +P+   + +L+  L + G    A++L    L      G +
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              D+ SY  ++D L   G+   A  +  ++   G + +  S   LI G  + G  + A
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 874



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 250/538 (46%), Gaps = 33/538 (6%)

Query: 25  LVYNVLHGAKNSEHALQFFRWV----ERAGLFNHDRETHLKMIEILGRVGKLNHA----R 76
           + Y+ L      EH +    W+    ++ G    D  T+  +++ L + G +N A    +
Sbjct: 383 VTYSTLIKGLCMEHRISEATWLFMSMQKLGC-RPDAITYGTLMKGLCQTGNINIALQLHQ 441

Query: 77  CILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
            +L D  + G++    +  + ++I+   K     E+ ++F+ MK  G+   V SY  L  
Sbjct: 442 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIH 501

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
                G++  AK  FN+ML  GI+P   T +V++       K+  A +  E +  RG  L
Sbjct: 502 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIL 561

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           DVVT  T++ G     ++ +A +LF +M++    P V++  T++KG         AL + 
Sbjct: 562 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 621

Query: 255 DEMKS------FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
             M S       + KPNA++Y+ ++ GLC  G+  E +++ +EM    + P D   +  L
Sbjct: 622 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP-DVISYTSL 680

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   C+SG    A  +   M+ + +  +   + +LI+  CK      A +LL+ ++++  
Sbjct: 681 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 740

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
           I  P +       +Y  +++ LC N +  +A   F ++ K G L D V +  L++G  + 
Sbjct: 741 I--PNTV------TYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT 792

Query: 428 GNPDSAFEIVKIM----GRRGV--PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
           GN  +A E+ K M    G+ G     D  +Y  +I+   + G   +A+     M   G  
Sbjct: 793 GNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI 852

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           P    + S++      G+++ A  +   MV++GV+ N    + ++      G +++AL
Sbjct: 853 PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 220/451 (48%), Gaps = 11/451 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
             ++++ + L   +  + A + F  ++  G+   D  ++  +I      GK   A+C+  
Sbjct: 459 ISYSIIIDGLCKDRREDEARELFEEMKAQGIMP-DVISYTTLIHGFCLSGKWEKAKCLFN 517

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G+Q D     VLI+   KKG V E+ K+ +++ Q G    V +   L K +  + 
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKH 577

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS----RGISL-- 194
           R   A + F KM   G  P   T   ++ G   S  ++ A+   ++M S     GI+   
Sbjct: 578 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 637

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           + ++Y+ +I+G  +  + DEA +LF EMK   + P VISYT++I G+    +  DA  +F
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 697

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           +EM    V+P+  T++ L+  LC  GK++E  ++L  M++R   P +   +  L+   C 
Sbjct: 698 NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP-NTVTYTTLVKGLCM 756

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           +  ++ A  +   M +L    +   YG L++  C+      A++L  K++      +  +
Sbjct: 757 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDT--GQYGT 814

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
               +  SY+ +I  LC +G+  +A   F+++   GV+ + +++ +LI G  + G  + A
Sbjct: 815 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 874

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
             +   M  +GV  +A  Y  +I  + ++G+
Sbjct: 875 KHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 905



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 146/629 (23%), Positives = 290/629 (46%), Gaps = 35/629 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA----RCILLDMPKKGVQW---DE 91
           A Q F  +++ G    D   +  +++ L + GK+N A    + +L D  + G++    D 
Sbjct: 289 ATQLFMSMKKLGC-RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDV 347

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
               +LI+   K+G V E+ ++ ++M Q G    + +Y  L K +    R   A   F  
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMS 407

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS----RGISL--DVVTYNTMING 205
           M   G  P   TY  ++ G   +  +  A++  ++M +     GI     +++Y+ +I+G
Sbjct: 408 MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 467

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             + ++ DEA +LF EMK + I P VISYTT+I G+    + + A  +F+EM    ++P+
Sbjct: 468 LCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 527

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
             T + L+  LC  GK++E  K+L  +++R     D      L+   C    ++ A  + 
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIL-DVVTCTTLVKGLCMKHRISKATQLF 586

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE----IILRPQSTLDMEAS 381
             M +L           L++  C++     A++L   ++       I  +P       A 
Sbjct: 587 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN------AI 640

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           SY+ +I  LC  G+  +A   F+++   GV+ D +++ +LI G  + G    A  +   M
Sbjct: 641 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              GV  D   +  LI+   ++G+  +A   L+ MI+ G  P +  + ++++ L  + R+
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM----QSGS-----V 551
             A+++   M + G   ++     +++ L   G+++ AL     M+    Q G+     V
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
            ++  ++  L + G+   A +L         I ++ SY  ++     +GK  +A  +  +
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++++G   +  +   +I G  +EG   +A
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 158/654 (24%), Positives = 298/654 (45%), Gaps = 36/654 (5%)

Query: 25  LVYNVLHGAKNSEHALQFFRWV----ERAGLFNHDRETHLKMIEILGRVGKLNHA----R 76
           + Y+ L      EH +    W+    ++ G    D  T+  +++ L + G +N A    +
Sbjct: 90  VTYSTLIKGLCMEHRISEATWLFMSMQKLGC-RPDAITYGTLMKGLCQTGNINIALQLHQ 148

Query: 77  CILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
            +L D  + G++    +  + ++I+   K     E+ ++F  MK  G+   V SY +L  
Sbjct: 149 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIH 208

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
                G++  AK  FN+ML  GI+P   T  V++  F    K+  A    E M  RG  L
Sbjct: 209 GFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCIL 268

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D+VTY+T+I G     ++ EA +LF  MK+    P  I+Y T++KG     + + AL + 
Sbjct: 269 DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 328

Query: 255 DEM----KSFDVK---PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            EM      + +K   P+  T + L+  LC  GK++E  ++L  M++R     D   +  
Sbjct: 329 QEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL-DIVTYST 387

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK- 366
           L+   C    ++ A  +  +M +L    +A  YG L++  C+    + A++L  +++   
Sbjct: 388 LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 447

Query: 367 -EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
               ++ + TL     SY+ +I  LC + +  +A   F ++  +G++ D +++  LI G 
Sbjct: 448 GRYGIKCKPTL----ISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGF 503

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
              G  + A  +   M   G+  D      LI+   +KG+  +A   L+ +I+ G     
Sbjct: 504 CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDV 563

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
               ++++ L    R+  A+++   M + G   N+   A +++ L   G+++ AL     
Sbjct: 564 VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKN 623

Query: 545 MMQSGSV------PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           M+   S       PN   +  ++  L + G+   A +L         I D+ SY  ++  
Sbjct: 624 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 683

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIR 648
              +GK  +A  +  ++++ G   D  +   LI  L +EG   +A+ +L  MI+
Sbjct: 684 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 737



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 128/571 (22%), Positives = 243/571 (42%), Gaps = 55/571 (9%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +   V +   L  ++ + G+ + A      M+  G      TY+ ++ G  +  ++  A 
Sbjct: 50  IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 109

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN------IEPTVISYT 235
             F  M+  G   D +TY T++ G  +   ++ A +L  EM           +PT+ISY+
Sbjct: 110 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 169

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I G     R D+A  +F EMK+  + P+ ++YT+L+ G C +GK  + + +  EM++ 
Sbjct: 170 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDV 229

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            I P D +    L+ + CK G +  A ++L+ M+      +   Y  LI+  C       
Sbjct: 230 GIQP-DVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISE 288

Query: 356 AIKLLDKLVEKEIILRPQS------------------------------------TLDME 379
           A +L   +  K++  RP +                                     +  +
Sbjct: 289 ATQLFMSM--KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPD 346

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
            ++ + +I  LC  G+  +A      ++++G +LD V ++ LI+G   E     A  +  
Sbjct: 347 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 406

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG------HSPASSLFRSVME 492
            M + G   DA  Y  L++   + G    A      M+ D         P    +  +++
Sbjct: 407 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 466

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
            L +D R   A  + + M  +G+  ++     ++    + G  E+A    + M+  G  P
Sbjct: 467 GLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 526

Query: 553 NFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +  +   L+ +L +KGK I A KLL+  + R CI+D+ +   ++  L    +   A  + 
Sbjct: 527 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLF 586

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            K+ + G + +  +   L+ GL Q GN K A
Sbjct: 587 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIA 617



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/498 (23%), Positives = 210/498 (42%), Gaps = 79/498 (15%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT---------MINGY 206
           G+ P   T+N+++       ++   +     +  RG   D+VTY+          +I+  
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +  K+ EA +L   M ++     +++Y+T+IKG     R  +A  +F  M+    +P+A
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVE---RYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           +TY  L+ GLC  G +    ++ +EM+    RY             G++CK         
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRY-------------GIKCK--------- 162

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
                     PT    Y I+I+  CK    D A +L  +       ++ Q  +  +  SY
Sbjct: 163 ----------PTLIS-YSIIIDGLCKDRREDEARELFKE-------MKAQGMMP-DVISY 203

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN-LIRGHSKEGNPDSAFEIVKIMGR 442
             +I   CH+G+  KA+  F +++  G+   V  +  LI    KEG    A E++++M  
Sbjct: 204 TSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVH 263

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           RG   D   Y  LI+    K   ++A     SM + G  P +  + ++M+ L + G++  
Sbjct: 264 RGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINI 323

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
           A  + + M+    +  +  +                  R D+   S        L+ +L 
Sbjct: 324 ALHLHQEMLNDTSQYGIKCI------------------RPDVTTSS-------MLIDILC 358

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           ++GK I A +LL+  + R CI+D+ +Y  ++  L    +   A  +   + + G   D  
Sbjct: 359 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 418

Query: 623 SSDKLIAGLNQEGNTKQA 640
           +   L+ GL Q GN   A
Sbjct: 419 TYGTLMKGLCQTGNINIA 436


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 217/465 (46%), Gaps = 10/465 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +++ L + G+LN AR +LLDM  KG+  +   F +L+    + G ++E+  + 
Sbjct: 231 DNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVI 290

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           ++M Q  V     +Y+ +     ++GR   A R   +M +  + P   TYN ++ G F  
Sbjct: 291 ELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEH 350

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              E   +  E+M+ RG+  + VTYN M+  + +  KMDE +K   +M+E    P +++Y
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTY 410

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I  +  V + D+A R+ DEM    +K + VT   +L  LC   K+ E   +L     
Sbjct: 411 NTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARR 470

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R     + S    ++G   K    + A  +   M    I      Y  +I   C+    +
Sbjct: 471 RGYFVDEVSYGTLIIGYF-KHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTN 529

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
           +AI  LD+L+E        S L  +  +YN +I   C  GQ  KA  F  ++++K    D
Sbjct: 530 QAIDKLDELLE--------SGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPD 581

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V  N L+ G  KEG  + A ++      +G   DA +Y  +I S  ++    +A   L+
Sbjct: 582 VVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLE 641

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
            M E    P    + +++  L + GR++ A   +  + EKG  EN
Sbjct: 642 EMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN 686



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 228/514 (44%), Gaps = 43/514 (8%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           ++ +  D  K GV+ + + F +LI     +    E++++   M+  G      +Y+ +  
Sbjct: 181 SKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILD 240

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + ++GR   A+     M ++G+ P R T+N+++ G      L+ A    E M    +  
Sbjct: 241 GLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVP 300

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D  TYN MI+G+ +  ++ EA +L  EM+   + P V++Y T+I G      +++  ++ 
Sbjct: 301 DAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLI 360

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK-------------- 300
           +EM+   +KPN+VTY  ++      GKM EV K +R+M E    P               
Sbjct: 361 EEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKV 420

Query: 301 --------------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
                               D+     +L   C+   L+ A D+L +  R     +   Y
Sbjct: 421 GKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSY 480

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
           G LI  + K E   +A++L D++ EKEII  P         +YN MI  LC  G+T +A 
Sbjct: 481 GTLIIGYFKHEKASQALRLWDEMKEKEII--PSII------TYNSMIAGLCQMGKTNQAI 532

Query: 401 IFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
               +L++ G V D + +N +I G+ +EG  + AF+    M  +    D      L+   
Sbjct: 533 DKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGL 592

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            ++G    A    ++ I  G    +  + +++ SL ++ R   A  +++ M EK +  + 
Sbjct: 593 CKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDC 652

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
                IL  L   G +++A   I  + + G   N
Sbjct: 653 YTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN 686



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/566 (21%), Positives = 256/566 (45%), Gaps = 16/566 (2%)

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR---R 139
           P   +   + + ++ I +Y   G   ++ +IF+ MK+LG++ ++ + + L   ++R    
Sbjct: 116 PVSCLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSS 175

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
               ++K  F   +  G++   +++N+++ G  +  +   AIR    M+  G   D +TY
Sbjct: 176 HSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITY 235

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+++G  +  +++EA  L  +MK K + P   ++  ++ G   +    +A  + + M  
Sbjct: 236 NTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQ 295

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             V P+A TY  ++ G C  G++ E  ++  EM    + P D   +  L+    + G   
Sbjct: 296 NSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSP-DVVTYNTLINGCFEHGSSE 354

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
               +++ M    +   +  Y ++++ F K    D   K + K+ E   +         +
Sbjct: 355 EGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCL--------PD 406

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +YN +I   C  G+  +A     ++ +KG+ +D V  N ++R   +E   D A +++ 
Sbjct: 407 IVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLC 466

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
              RRG   D  +Y  LI  Y +  + + A    D M E    P+   + S++  L + G
Sbjct: 467 SARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMG 526

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---D 555
           +   A   +  ++E G+  +      I+      G VE+A    + M++    P+    +
Sbjct: 527 KTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCN 586

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +LL  L ++G    A+KL +  + +   +D  SY  ++ +L    +   A+ +L ++ EK
Sbjct: 587 TLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEK 646

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQAD 641
               D  + + ++ GL   G  K A+
Sbjct: 647 KLGPDCYTYNAILGGLTDAGRMKDAE 672



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 231/519 (44%), Gaps = 23/519 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           ++ S  +F    ++GV+ +  S++ L        R+  A R   KM   G  P   TYN 
Sbjct: 178 IRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNT 237

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           +L G     +L  A     DMK++G+  +  T+N ++ G  R   + EA  +   M + +
Sbjct: 238 ILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNS 297

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           + P   +Y  MI G+    R  +A+R+ +EM++  + P+ VTY  L+ G  + G   E  
Sbjct: 298 VVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGF 357

Query: 287 KVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           K++ EM  R + P  NSV +  ++    K G ++     ++ M       +   Y  LI 
Sbjct: 358 KLIEEMEGRGMKP--NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLIS 415

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CK    D A +L+D++  K         L M+  + N M++ LC   +  +A      
Sbjct: 416 WHCKVGKMDEAFRLMDEMGRK--------GLKMDDVTLNTMLRALCRERKLDEAHDLLCS 467

Query: 406 LMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
             ++G  +D V++  LI G+ K      A  +   M  + +      Y  +I    + G+
Sbjct: 468 ARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGK 527

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              A   LD ++E G  P    + +++    ++G+V+ A +    MVEK  K ++     
Sbjct: 528 TNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNT 587

Query: 525 ILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFC---- 577
           +L  L   G +E+AL   +  +  G      ++++++  L ++ +   A  LL+      
Sbjct: 588 LLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKK 647

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           LG DC     +Y  +L  L  AG+  +A   + KI EKG
Sbjct: 648 LGPDCY----TYNAILGGLTDAGRMKDAEEFISKIAEKG 682



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 122/303 (40%), Gaps = 59/303 (19%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A +    + R GL   D  T   M+  L R  KL+ A  +L    ++G   DE  +  
Sbjct: 424 DEAFRLMDEMGRKGL-KMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGT 482

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI  Y K     ++++++D MK+  +  S+ +Y+++   + + G+   A    +++L  G
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG 542

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRF--------------------------------- 183
           + P   TYN ++ G+    ++E A +F                                 
Sbjct: 543 LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKAL 602

Query: 184 --FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F    S+G  +D V+YNT+I    + K+  EA  L  EM+EK + P   +Y  ++ G 
Sbjct: 603 KLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGL 662

Query: 242 VAVERADDALRIFDEM--------------KSFDVK---------PNAVTYTALLPGLCD 278
               R  DA     ++              K  D +         PNA+ Y+  +  LC 
Sbjct: 663 TDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCS 722

Query: 279 AGK 281
            G+
Sbjct: 723 QGR 725


>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 544

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 216/436 (49%), Gaps = 19/436 (4%)

Query: 34  KNSEHALQFFRWVER-AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           +N + ALQ F +  +    F+H+ +T+  +I  L R         +L D+ K  ++  E+
Sbjct: 72  QNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGEN 131

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F  +I +YG  G    +++ F  ++   V+RSV+S + L    ++  RY +    F   
Sbjct: 132 IFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNC 191

Query: 153 LSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
            S+ G+ P   T N+++        +E+A++  ++M + G+  +VVTY T++ GY+    
Sbjct: 192 RSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGD 251

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           M  A K+F E+ ++   P   +YT ++ GY    R  DA+++ D+M    V+PN VTY  
Sbjct: 252 MVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGV 311

Query: 272 LLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           ++   C   K  E + +L +M+ER Y+P   +++  K++ V C++G +  A ++ K M++
Sbjct: 312 MVEAYCKEKKAGEARNLLDDMLERQYVP--SSALCCKVIDVLCEAGKIEEACELWKRMLK 369

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
            +   +      LI   CK      A KL  +     I     S L     +YN +I  +
Sbjct: 370 KNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAI----PSLL-----TYNTLIAGM 420

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPVAF--NNLIRGHSKEGNPDSAFEIV-KIMGRRGVPR 447
           C  G+  +A   +  +M+KG   P AF  N LI+G SK GN      I+ +++  R +P 
Sbjct: 421 CEKGELSEAGKLWDDMMEKG-YKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMP- 478

Query: 448 DADAYICLIESYLRKG 463
           +   Y  LIE   + G
Sbjct: 479 NKSTYAILIEELCKMG 494



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 198/438 (45%), Gaps = 18/438 (4%)

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           Q     +  +YD++   + R   +   +   + +    I+   + +  ++  + L+ K +
Sbjct: 88  QPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPD 147

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK-NIEPTVISYTTM 237
            A+R F  ++   +   V + NT++N + + K+ D    +F   + K  + P V +   +
Sbjct: 148 FALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNIL 207

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-Y 296
           IK        + A+++ DEM +  + PN VTYT +L G    G MV   KV  E+ +R +
Sbjct: 208 IKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGW 267

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +P  D + +  L+   C+ G L  A  ++  M    +      YG+++E +CK +    A
Sbjct: 268 LP--DATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEA 325

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
             LLD ++E++ +  P S L  +      +I  LC  G+  +A   +++++KK  + D  
Sbjct: 326 RNLLDDMLERQYV--PSSALCCK------VIDVLCEAGKIEEACELWKRMLKKNCMPDNA 377

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGR--RGVPRDADAYICLIESYLRKGEPADAKTALD 473
             + LI    KEG     +E  K+ G   RG       Y  LI     KGE ++A    D
Sbjct: 378 IMSTLIHWLCKEG---KVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWD 434

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+E G+ P +  +  +++   + G  +   R+++ M++     N    A ++E L   G
Sbjct: 435 DMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMG 494

Query: 534 HVEEALGRIDLMMQSGSV 551
              E    + + M SG V
Sbjct: 495 MEGEVDKVVSMAMASGGV 512



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 147/330 (44%), Gaps = 10/330 (3%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K GV  +     +LI++  KK  V+ +VK+ D M  +G+  +V +Y  +      RG  +
Sbjct: 194 KYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMV 253

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A + F ++   G  P   TY +++ G+    +L  AI+  +DM   G+  + VTY  M+
Sbjct: 254 NANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMV 313

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
             Y + KK  EA  L  +M E+   P+      +I       + ++A  ++  M   +  
Sbjct: 314 EAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCM 373

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+    + L+  LC  GK+ E +K+  E     IP      +  L+   C+ G L+ A  
Sbjct: 374 PDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSL--LTYNTLIAGMCEKGELSEAGK 431

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +   M+       A  Y +LI+ F K       I++L+++++   +  P        S+Y
Sbjct: 432 LWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCM--PNK------STY 483

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
             +I+ LC  G  G+ +      M  G +D
Sbjct: 484 AILIEELCKMGMEGEVDKVVSMAMASGGVD 513



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/405 (21%), Positives = 178/405 (43%), Gaps = 50/405 (12%)

Query: 177 LETAIRFFE--DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           L+ A++ FE         S +  TY+++I+  +R +     E L +++ +  I+     +
Sbjct: 74  LDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIF 133

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I+ Y    + D ALR F  ++ F+V+ +  +   LL       +   V  + +    
Sbjct: 134 INVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRS 193

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           +Y                           VL  +   +I         LI+  CK    +
Sbjct: 194 KY--------------------------GVLPNVFTCNI---------LIKALCKKNDVE 218

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A+K+LD++        P   +     +Y  ++      G    A   F +L  +G L D
Sbjct: 219 SAVKVLDEM--------PAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPD 270

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              +  L+ G+ ++G    A +++  MG  GV  +   Y  ++E+Y ++ +  +A+  LD
Sbjct: 271 ATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLD 330

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+E  + P+S+L   V++ L E G+++ A  + K M++K    +  +++ ++  L   G
Sbjct: 331 DMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEG 390

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
            V EA  ++    + G++P+   +++L++ + EKG+   A KL D
Sbjct: 391 KVWEAR-KLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWD 434



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 6/264 (2%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPV-AFNNLIRGHSKEGNPDSAFEIVKI 439
           S N ++     N +       F+    K GVL  V   N LI+   K+ + +SA +++  
Sbjct: 167 SLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDE 226

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G+  +   Y  ++  Y  +G+  +A      + + G  P ++ +  +M    E GR
Sbjct: 227 MPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGR 286

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           +  A ++M  M E GV+ N      ++EA        EA   +D M++   VP+      
Sbjct: 287 LADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCK 346

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           ++ VL E GK   A +L    L ++C+ D A    ++  L   GK   A   LF   E+G
Sbjct: 347 VIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARK-LFGEFERG 405

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQA 640
            +    + + LIAG+ ++G   +A
Sbjct: 406 AIPSLLTYNTLIAGMCEKGELSEA 429


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 155/644 (24%), Positives = 294/644 (45%), Gaps = 27/644 (4%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAKNSE---HALQFFRWVERAGLFNHDRETHLKMIEI 65
           R + + RA  P  +     +V+H  ++++    AL+ FR   R         +   M+E+
Sbjct: 165 RARVQPRAPPPCDERRAAEDVIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLEL 224

Query: 66  L---GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           +   GRVG +     +   M ++ V+ +   F  +    G +G ++ +     +MK+ G+
Sbjct: 225 MRGHGRVGDMAE---VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGI 281

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             +  +Y+ L   +++ G    A   +  M+ +G+ P+  TY+V++  F     +ET + 
Sbjct: 282 VLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 341

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
              +M++ G+  +V +Y   I    + K+ DEA ++ A+M+ +  +P VI++T +I+   
Sbjct: 342 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC 401

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKD 301
              R  DA  +F +MK  D KP+ VTY  LL    D G    V ++   M  + Y    D
Sbjct: 402 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGY---ND 458

Query: 302 NSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           N V +  ++   C+ G +  A ++   M +  I  E   Y  LI  F KA+ +  A++L 
Sbjct: 459 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 518

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
             +     I  P+        ++   I +   +G++ KA   +  +  KG++ D VA N 
Sbjct: 519 KHM----DIHGPKPN----GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 570

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           ++ G +K G    A  +   +   GV  D   Y  +I+   +  +  +A      MIE+ 
Sbjct: 571 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 630

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P      S++++L++ GR   A R+   + E  ++        +L  L   G V+E +
Sbjct: 631 CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 690

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             ++ M  S   PN   ++++L  L + G    A+ +L     + CI DL+SY  V+  L
Sbjct: 691 HLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 750

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +   +   A+SI F  M+K  + D+ +   ++    + G  K+A
Sbjct: 751 VKEERYNEAFSI-FCQMKKVLIPDYATLCTILPSFVKIGLMKEA 793



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 158/658 (24%), Positives = 290/658 (44%), Gaps = 53/658 (8%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            H ++  VL  A     A   F W  +      DR T++ +++  G  G       I   M
Sbjct: 393  HTVLIQVLCDAGRISDAKDVF-WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 451

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G   +   +  +I++  + G V E++++FD MKQ G+     SY++L    L+  R+
Sbjct: 452  KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRF 511

Query: 143  MMAKRYFNKMLSEGIEPTRHTY-----------------------------------NVM 167
              A   F  M   G +P  +T+                                   N +
Sbjct: 512  GDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 571

Query: 168  LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
            L+G   S +L  A R F ++K+ G+S D +TY  MI   ++  K DEA K+F +M E N 
Sbjct: 572  LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 631

Query: 228  EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
             P V++  ++I       R D+A RIF ++K  +++P   TY  LL GL   GK+ EV  
Sbjct: 632  VPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 691

Query: 288  VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
            +L EM     PP +   +  +L   CK+G +N A D+L +M       +   Y  +I   
Sbjct: 692  LLEEMYHSNYPP-NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 750

Query: 348  CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP--MIQHLCHNGQTGKAEIFFRQ 405
             K E Y+ A  +  ++  K++++   +TL     S+    +++   H       + +F Q
Sbjct: 751  VKEERYNEAFSIFCQM--KKVLIPDYATLCTILPSFVKIGLMKEALH-----IIKDYFLQ 803

Query: 406  LMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC-LIESYLRKGE 464
               K   D  + ++L+ G  K+   + + E  +I+   G+  D D ++C LI+   ++ +
Sbjct: 804  PGSK--TDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLD-DFFLCPLIKHLCKQKK 860

Query: 465  PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              +A   +      G S  + L+ S++  L ++  +  A  +   M E G   +      
Sbjct: 861  ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 920

Query: 525  ILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
            +L+A+     +EE L   + M + G   +   +++++S L +  +   A+ L    + + 
Sbjct: 921  LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 980

Query: 582  CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
                  +Y  +LD LL AG+  +A ++  +++E G   +    + L+ G    GNT++
Sbjct: 981  FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEK 1038



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 143/632 (22%), Positives = 277/632 (43%), Gaps = 30/632 (4%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + + +   VL  AK  + A +    +E  G    D  TH  +I++L   G+++ A+ +  
Sbjct: 356 YSYTICIRVLGQAKRFDEAYRILAKMENEGC-KPDVITHTVLIQVLCDAGRISDAKDVFW 414

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M K   + D   +  L++ +G  G  Q  ++I++ MK  G   +V +Y A+   + + G
Sbjct: 415 KMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVG 474

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A   F++M  +GI P +++YN ++ GF  + +   A+  F+ M   G   +  T+ 
Sbjct: 475 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 534

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
             IN Y +  +  +A + +  MK K I P V++   ++ G     R   A R+F E+K+ 
Sbjct: 535 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 594

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V P+ +TYT ++     A K  E  K+  +M+E    P D      L+    K+G  + 
Sbjct: 595 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP-DVLAVNSLIDTLYKAGRGDE 653

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +   +  +++    G Y  L+    +       + LL+++          S      
Sbjct: 654 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY--------HSNYPPNL 705

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +YN ++  LC NG    A      +  KG + D  ++N +I G  KE   + AF I   
Sbjct: 706 ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 765

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTAL-DSMIEDGHSPASSLFRSVMESLFEDG 498
           M +  +P D      ++ S+++ G   +A   + D  ++ G     S   S+ME + +  
Sbjct: 766 MKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKA 824

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA------LGRIDLMMQSGSVP 552
            ++ +    + +   G+  +   +  +++ L  +    EA           + +++G   
Sbjct: 825 GIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL-- 882

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            ++SL+  L ++     A  L        C  D  +Y  +LDA+   GK++    +L K+
Sbjct: 883 -YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIEEML-KV 937

Query: 613 ME----KGGVTDWKSSDKLIAGLNQEGNTKQA 640
            E    KG  + + + + +I+GL +    +QA
Sbjct: 938 QEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 969



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 172/350 (49%), Gaps = 10/350 (2%)

Query: 86   GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
            G+  D+     LI+   K+    E+ ++    K  GV      Y++L   ++      +A
Sbjct: 840  GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 899

Query: 146  KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            +  F +M   G  P   TYN++L     S+++E  ++  E+M  +G     VTYNT+I+G
Sbjct: 900  EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISG 959

Query: 206  YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
              + +++++A  L+  +  +   PT  +Y  ++ G +   R +DA  +F+EM  +  K N
Sbjct: 960  LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 1019

Query: 266  AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
               Y  LL G   AG   +V  + ++MV++ I P D   +  ++   CK+G LN      
Sbjct: 1020 CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP-DIKSYTIIIDTLCKAGQLNDGLTYF 1078

Query: 326  KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
            + ++ + +  +   Y +LI+   K++  + A+ L +++ +K I+            +YN 
Sbjct: 1079 RQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV--------PNLYTYNS 1130

Query: 386  MIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
            +I HL   G+  +A   + +L+ KG    V  +N LIRG+S  G+ DSA+
Sbjct: 1131 LILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAY 1180



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 142/669 (21%), Positives = 274/669 (40%), Gaps = 50/669 (7%)

Query: 21   FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
            + H L  N    +  S  A+Q +  ++  G+   D      ++  L + G+L  A+ +  
Sbjct: 531  YTHVLFINYYGKSGESIKAIQRYELMKSKGIV-PDVVAGNAVLFGLAKSGRLGMAKRVFH 589

Query: 81   DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            ++   GV  D   + ++I+   K     E+VKIF  M +      V + ++L   + + G
Sbjct: 590  ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 649

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
            R   A R F ++    +EPT  TYN +L G     K++  +   E+M       +++TYN
Sbjct: 650  RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 709

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            T+++   +   +++A  +   M  K   P + SY T+I G V  ER ++A  IF +MK  
Sbjct: 710  TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 769

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             + P+  T   +LP     G M E   ++++   +     D S    L+    K   +  
Sbjct: 770  LI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK 828

Query: 321  AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
            + +  + +    I  +      LI++ CK +    A +L+ K     + L+         
Sbjct: 829  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK--------T 880

Query: 381  SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG----------VLDP---------------- 414
              YN +I  L        AE  F ++ + G          +LD                 
Sbjct: 881  GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 940

Query: 415  ----------VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
                      V +N +I G  K    + A ++   +  +G       Y  L++  L+ G 
Sbjct: 941  MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 1000

Query: 465  PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              DA+   + M+E G     +++  ++      G  +    + + MV++G+  ++     
Sbjct: 1001 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 1060

Query: 525  ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
            I++ L   G + + L     +++ G  P+   ++ L+  L +  +   AV L +    + 
Sbjct: 1061 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 1120

Query: 582  CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA- 640
             + +L +Y  ++  L  AGK   A  +  +++ KG   +  + + LI G +  G+T  A 
Sbjct: 1121 IVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAY 1180

Query: 641  DILSRMIRG 649
                RMI G
Sbjct: 1181 AAYGRMIVG 1189



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 119/243 (48%), Gaps = 1/243 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N + + L  ++  E A+  +  +   G F+    T+  +++ L + G++  A  +  +M
Sbjct: 953  YNTIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 1011

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + G + +  ++ +L+  +   G  ++   +F  M   G+   +KSY  +   + + G+ 
Sbjct: 1012 LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 1071

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 YF ++L  G+EP   TYN+++ G   S +LE A+  F +M+ +GI  ++ TYN++
Sbjct: 1072 NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSL 1131

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I    +  K  EA K++ E+  K  +P V +Y  +I+GY      D A   +  M     
Sbjct: 1132 ILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGC 1191

Query: 263  KPN 265
             PN
Sbjct: 1192 LPN 1194


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 210/406 (51%), Gaps = 10/406 (2%)

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           +K+ + M+  G++ +  +Y+ +  L+ + G+   A+R   +M+SEGI P    Y  ++ G
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           F     + +A R F++M+ R IS D +TY  +I G  +  ++ EA+KLF EM  K +EP 
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
            ++YT +I GY    +  +A  + ++M    + PN VTYTAL  GLC  G++    ++L 
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           EM  + +   +   +  L+   CK+G+++ A  ++K M       +A  Y  L++ +CK+
Sbjct: 388 EMCRKGL-ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 446

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
               RA +LL +++++E  L+P         ++N ++   C +G     E   + +++KG
Sbjct: 447 REMVRAHELLRQMLDRE--LQPT------VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           ++ +   +N+LI+ +    N  +  EI + M  +GV  D + Y  LI+ + +     +A 
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
                M+  G +   S + ++++  ++  +   A  + + M  +G+
Sbjct: 559 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGL 604



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 194/396 (48%), Gaps = 10/396 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I +L + GK+  A  +L +M  +G+  D  ++  LI+ + K G V  + ++FD M
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ++  +     +Y A+   + + GR M A + F++M+ + +EP   TY  ++ G+    K+
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A      M   G++ ++VTY  + +G  +  ++D A +L  EM  K +E  + +Y ++
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G       D A+++  +M+     P+AVTYT L+   C + +MV   ++LR+M++R +
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P     F  L+   C SG L     +LK M+   I   A  Y  LI+ +C         
Sbjct: 465 QPT-VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           ++   +  K ++  P      + ++YN +I+  C      +A    R ++ KG  L   +
Sbjct: 524 EIYRGMCAKGVV--P------DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 575

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           +N LI+G  K      A E+ + M R G+  D + Y
Sbjct: 576 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 611



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 216/488 (44%), Gaps = 57/488 (11%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVM-------LWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           A++ F+KML+ G+  +  + N+        L G  ++LK E  ++  E+M+ +G+  +  
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN +I    +  K+ EAE++  EM  + I P  + YTT+I G+  +     A R+FDEM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           +   + P+ +TYTA++ GLC  G+++E  K+  EMV + + P D   +  L+   CK G 
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP-DEVTYTALIDGYCKEGK 343

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  +   M+++ +      Y  L +  CK    D A +LL ++  K         L+
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK--------GLE 395

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           +   +YN ++  LC                                  K GN D A +++
Sbjct: 396 LNIYTYNSLVNGLC----------------------------------KAGNIDQAVKLM 421

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           K M   G   DA  Y  L+++Y +  E   A   L  M++    P    F  +M      
Sbjct: 422 KDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMS 481

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
           G ++   +++K M+EKG+  N      +++   +R ++         M   G VP+ ++ 
Sbjct: 482 GMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTY 541

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCI-----IDLASYEKVLDALLAAGKTLNAYSILFKI 612
             ++  KG   A      + L RD +     + ++SY  ++       K L A  +  ++
Sbjct: 542 NILI--KGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 599

Query: 613 MEKGGVTD 620
             +G V D
Sbjct: 600 RREGLVAD 607



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 202/435 (46%), Gaps = 12/435 (2%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  KG++ +   +  +I    K G V E+ ++   M   G+      Y  L     + G
Sbjct: 213 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLG 272

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A R F++M    I P   TY  ++ G   + ++  A + F +M  + +  D VTY 
Sbjct: 273 NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 332

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+GY +  KM EA  L  +M +  + P +++YT +  G       D A  +  EM   
Sbjct: 333 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 392

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            ++ N  TY +L+ GLC AG + +  K++++M      P D   +  L+   CKS  +  
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP-DAVTYTTLMDAYCKSREMVR 451

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A ++L+ M+   +      + +L+  FC + M +   KLL  ++EK I+  P +T     
Sbjct: 452 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM--PNAT----- 504

Query: 381 SSYNPMIQHLC-HNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
            +YN +I+  C  N      EI +R +  KGV+ D   +N LI+GH K  N   A+ + +
Sbjct: 505 -TYNSLIKQYCIRNNMRATTEI-YRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 562

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  +G      +Y  LI+ + ++ +  +A+   + M  +G      ++    +  +++G
Sbjct: 563 DMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEG 622

Query: 499 RVQTASRVMKSMVEK 513
           +++    +    +EK
Sbjct: 623 KMELTLELCDEAIEK 637



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + +N + N L  A N + A++  + +E AG F+ D  T+  +++   +  ++  A  +L 
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAG-FHPDAVTYTTLMDAYCKSREMVRAHELLR 457

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M  + +Q     F VL+  +   G++++  K+   M + G+  +  +Y++L K    R 
Sbjct: 458 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 517

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                   +  M ++G+ P  +TYN+++ G   +  ++ A     DM  +G +L V +YN
Sbjct: 518 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYN 577

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNI 227
            +I G+ + KK  EA +LF +M+ + +
Sbjct: 578 ALIKGFYKRKKFLEARELFEQMRREGL 604



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 113/241 (46%), Gaps = 6/241 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L + G ++ A  ++ DM   G   D   +  L+++Y K    +E V+  +++
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS---REMVRAHELL 456

Query: 118 KQL---GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           +Q+    ++ +V +++ L       G     ++    ML +GI P   TYN ++  + + 
Sbjct: 457 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 516

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +      +  M ++G+  D  TYN +I G+ + + M EA  L  +M  K    TV SY
Sbjct: 517 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 576

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +IKG+   ++  +A  +F++M+   +  +   Y        D GKM    ++  E +E
Sbjct: 577 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 636

Query: 295 R 295
           +
Sbjct: 637 K 637



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 90/228 (39%), Gaps = 32/228 (14%)

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           +P  +N +I    K G    A  +++ M   G+  D   Y  LI+ + + G  + A    
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D M +   SP    + +V+  L + GRV  A ++   MV K ++ +      +++     
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           G ++EA    + M+Q G  PN                                + +Y  +
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPN--------------------------------IVTYTAL 369

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            D L   G+   A  +L ++  KG   +  + + L+ GL + GN  QA
Sbjct: 370 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 417


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 192/394 (48%), Gaps = 12/394 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++ ++ + G+   A  +L  M ++ ++ D   + ++I+   K G +  +  +F+ M
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +  G+  ++ +Y+ L       GR+    +    M+   I P   T++V++  F    KL
Sbjct: 388 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 447

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A    ++M  RGI+ D +TY ++I+G+ +   +D+A ++   M  K  +P + ++  +
Sbjct: 448 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 507

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I GY    R DD L +F +M    V  + VTY  L+ G C+ GK+   +++ +EMV R +
Sbjct: 508 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 567

Query: 298 PPKDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           PP  N V  K LL   C +G    A ++ + + +  +  + G Y I+I   C A   D A
Sbjct: 568 PP--NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 625

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPV 415
             L   L        P   +     +YN MI  LC  G   +AE+ FR++ + G   D  
Sbjct: 626 WDLFCSL--------PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 677

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
            +N LIR H  +G+   + ++++ + R G   DA
Sbjct: 678 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDA 711



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 236/543 (43%), Gaps = 30/543 (5%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R L    D + +++ +   K  +  L   + +E  G+  H+  T   MI    R  KL  
Sbjct: 181 RPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI-AHNLYTLSIMINCFCRCRKLCL 239

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A   +  + K G + +   F  LI     +G V E++++ D M ++G +  + + + L  
Sbjct: 240 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 299

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            +   G+   A    +KM+  G +P   TY  +L     S +   A+     M+ R I L
Sbjct: 300 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 359

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D V Y+ +I+G  +   +D A  LF EM+ K I   +I+Y  +I G+    R DD  ++ 
Sbjct: 360 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 419

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            +M    + PN VT++ L+      GK+ E +++ +EM+ R I P D   +  L+   CK
Sbjct: 420 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP-DTITYTSLIDGFCK 478

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL----------- 363
             HL+ A  ++  M+          + ILI  +CKA   D  ++L  K+           
Sbjct: 479 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 538

Query: 364 ---------------VEKEIILRPQS-TLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQL 406
                          V KE+     S  +     +Y  ++  LC NG++ KA EIF +  
Sbjct: 539 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 598

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
             K  LD   +N +I G       D A+++   +  +GV      Y  +I    +KG  +
Sbjct: 599 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 658

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A+     M EDGH+P    +  ++ +   DG    + ++++ +   G   +   +  ++
Sbjct: 659 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 718

Query: 527 EAL 529
           + L
Sbjct: 719 DML 721



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 219/482 (45%), Gaps = 13/482 (2%)

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           +LG E +  ++  L   +   GR   A    ++M+  G +P   T N ++ G  LS K  
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 308

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+   + M   G   + VTY  ++N   +  +   A +L  +M+E+NI+   + Y+ +I
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G       D+A  +F+EM+   +  N +TY  L+ G C+AG+  +  K+LR+M++R I 
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +   F  L+    K G L  A ++ K MI   I  +   Y  LI+ FCK    D+A +
Sbjct: 429 P-NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 487

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
           ++D +V K          D    ++N +I   C   +       FR++  +GV+ D V +
Sbjct: 488 MVDLMVSK--------GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 539

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI+G  + G  + A E+ + M  R VP +   Y  L++     GE   A    + + +
Sbjct: 540 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 599

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
                   ++  ++  +    +V  A  +  S+  KGVK  +     ++  L  +G + E
Sbjct: 600 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 659

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A      M + G  P+   ++ L+      G    +VKL++        +D ++ + V+D
Sbjct: 660 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 719

Query: 595 AL 596
            L
Sbjct: 720 ML 721



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 202/473 (42%), Gaps = 34/473 (7%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           +V  +  LF  I +  +Y +      +M  +GI    +T ++M+  F    KL  A    
Sbjct: 185 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 244

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
             +   G   + +T++T+ING     ++ EA +L   M E   +P +I+  T++ G    
Sbjct: 245 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 304

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            +  +A+ + D+M  +  +PNAVTY  +L  +C +G+     ++LR+M ER I   D   
Sbjct: 305 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK-LDAVK 363

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  ++   CK G L+ A ++   M    I T    Y ILI  FC A  +D   KLL  ++
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423

Query: 365 EKEI------------------ILRPQSTLDME---------ASSYNPMIQHLCHNGQTG 397
           +++I                   LR    L  E           +Y  +I   C      
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483

Query: 398 KAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
           KA      ++ KG  DP    FN LI G+ K    D   E+ + M  RGV  D   Y  L
Sbjct: 484 KANQMVDLMVSKGC-DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+ +   G+   AK     M+     P    ++ +++ L ++G  + A  + + + +  +
Sbjct: 543 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 602

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKG 565
           + ++ +   I+  +     V++A      +   G  P    ++ ++  L +KG
Sbjct: 603 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 655



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 201/447 (44%), Gaps = 16/447 (3%)

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           K D+A  LF +M      PTVI ++ +       ++ D  L +  +M+   +  N  T +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            ++   C   K+      + ++++    P +   F  L+   C  G ++ A +++  M+ 
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEP-NTITFSTLINGLCLEGRVSEALELVDRMVE 284

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
           +    +      L+   C +     A+ L+DK+VE     +P       A +Y P++  +
Sbjct: 285 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC--QPN------AVTYGPVLNVM 336

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C +GQT  A    R++ ++ + LD V ++ +I G  K G+ D+AF +   M  +G+  + 
Sbjct: 337 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 396

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  LI  +   G   D    L  MI+   +P    F  +++S  ++G+++ A  + K 
Sbjct: 397 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 456

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M+ +G+  +      +++      H+++A   +DLM+  G  PN   F+ L++   +  +
Sbjct: 457 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 516

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
               ++L      R  + D  +Y  ++      GK LN    LF+ M    V     + K
Sbjct: 517 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-LNVAKELFQEMVSRKVPPNIVTYK 575

Query: 627 -LIAGLNQEGNTKQA-DILSRMIRGEM 651
            L+ GL   G +++A +I  ++ + +M
Sbjct: 576 ILLDGLCDNGESEKALEIFEKIEKSKM 602



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 35/259 (13%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+   +   L+ A  ++  M  KG   +   F +LI  Y K   + + +++F
Sbjct: 465 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 524

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   GV     +Y+ L +     G+  +AK  F +M+S  + P   TY ++L G   +
Sbjct: 525 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 584

Query: 175 LKLETAIRFFEDMKSRGISLD-----------------------------------VVTY 199
            + E A+  FE ++   + LD                                   V TY
Sbjct: 585 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 644

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N MI G  +   + EAE LF +M+E    P   +Y  +I+ ++    A  ++++ +E+K 
Sbjct: 645 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 704

Query: 260 FDVKPNAVTYTALLPGLCD 278
                +A T   ++  L D
Sbjct: 705 CGFSVDASTIKMVIDMLSD 723


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 144/648 (22%), Positives = 288/648 (44%), Gaps = 35/648 (5%)

Query: 18  VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN-HAR 76
            P   ++++  +L    + + AL++F+  E    F    + +  ++ IL R  + + HAR
Sbjct: 96  TPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHAR 155

Query: 77  CIL-------------------LDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
            +L                   ++  K+   + D  +F  L+ +Y +   ++ ++  F+ 
Sbjct: 156 KLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNA 215

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M    V   V   + L   ++RR      +  +NKM+  GI     T +VM+       +
Sbjct: 216 MICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGR 275

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +E A  +F + K RG+ LD   Y+ +I    +    +   +L  EMKE+   P+  ++T+
Sbjct: 276 VEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTS 335

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I   VA     +ALR+ +EM +     N V  T+L+ G C  G +     +  ++ E  
Sbjct: 336 VIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDG 395

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P +   +  L+   C SG++  A+++   M    IP    +   L+  + KA +++ A
Sbjct: 396 LFP-NKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEA 454

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPV 415
            KL D+ V+  +             +YN M+  LC  G+  +A      ++ +G V + V
Sbjct: 455 SKLFDEAVDCGV---------ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVV 505

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           ++N++I GH ++GN D A  +   M  R +  +   Y  LI+   +KG+   A    D M
Sbjct: 506 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 565

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           +    +P    F +++  L + G++  A   +K+ +E+G   +      I++  +  G++
Sbjct: 566 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 625

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           + AL     M + G  PN   + SL++   +  +   A+K  D    +   +D+ +Y  +
Sbjct: 626 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSAL 685

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +D         +A  + F+++E G   +    + +I+G     N + A
Sbjct: 686 IDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAA 733



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/596 (22%), Positives = 276/596 (46%), Gaps = 17/596 (2%)

Query: 50  GLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQE 109
           G++      H+ M+    + G++  A     +  ++GV+ D   + ++I++  KK     
Sbjct: 255 GIYGDHFTVHV-MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNL 313

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
            +++ + MK+ G   S  ++ ++    + +G  + A R   +M++ G          ++ 
Sbjct: 314 GLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMK 373

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G+     L++A+  F  +   G+  + VTY+ +I G      +++A +L+ +MK   I P
Sbjct: 374 GYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 433

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
           +V +  ++++GY+     ++A ++FDE     V  N  TY  ++  LC  GKM E   +L
Sbjct: 434 SVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLL 492

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
             MV + + P   S    +LG  C+ G+++ A+ V   M+   +      Y ILI+   K
Sbjct: 493 DNMVNQGMVPNVVSYNDMILG-HCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 551

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
               ++A+ L D+++   I     +  D    ++N +I  LC  GQ  +A    +  +++
Sbjct: 552 KGDSEKALDLFDQMLSLNI-----APTDF---TFNTIINGLCKVGQMSEARDKLKNFLEE 603

Query: 410 GVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G +   + +N+++ G  KEGN DSA  + + M   GV  +   Y  LI  + +      A
Sbjct: 604 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 663

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
               D M E G     + + ++++   +   +++A  +   ++E G+  N  +   ++  
Sbjct: 664 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 723

Query: 529 LLMRGHVEEALGRIDLMMQSGSVP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                ++E AL     M+    +P     + +L+  L ++G+ + A  L    L +  + 
Sbjct: 724 FRDLNNMEAALVWYKKMIND-RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 782

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D+ ++  +++ L   G+  NA  IL ++  K         + LIAG  +EGN K+A
Sbjct: 783 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEA 838



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/483 (22%), Positives = 226/483 (46%), Gaps = 48/483 (9%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L+ A  +   + + G+  ++  + VLIE     G ++++ +++  MK  G+  SV + 
Sbjct: 379 GNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 438

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           ++L +  L+   +  A + F++ +  G+     TYN+M+       K++ A    ++M +
Sbjct: 439 NSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVN 497

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +G+  +VV+YN MI G+ R   MD A  +F++M  ++++P V++Y+ +I G      ++ 
Sbjct: 498 QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 557

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKL 308
           AL +FD+M S ++ P   T+  ++ GLC  G+M E +  L+  +E  +IP      +  +
Sbjct: 558 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP--SCMTYNSI 615

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +    K G++++A  V + M    +      Y  LI  FCK+   D A+K  D++ EK  
Sbjct: 616 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK-- 673

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV----------------- 411
                  L+++ ++Y+ +I   C       A+  F +L++ G+                 
Sbjct: 674 ------GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDL 727

Query: 412 -------------------LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
                               D   +  LI G  KEG    A ++   M  +G+  D   +
Sbjct: 728 NNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITF 787

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L+     KG+  +A+  L+ M     +P+  ++ +++   F +G ++ A  +   M++
Sbjct: 788 HVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 847

Query: 513 KGV 515
           +G+
Sbjct: 848 RGL 850



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 217/500 (43%), Gaps = 45/500 (9%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ------ 88
           N + AL  F  +   GLF  ++ T+  +IE     G +  A  +   M   G+       
Sbjct: 380 NLDSALNLFNKITEDGLF-PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 438

Query: 89  ------------WDED----------------MFEVLIESYGKKGIVQESVKIFDIMKQL 120
                       W+E                  + +++    K G + E+  + D M   
Sbjct: 439 NSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQ 498

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+  +V SY+ +     R+G   MA   F+ ML+  ++P   TY++++ G F     E A
Sbjct: 499 GMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKA 558

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +  F+ M S  I+    T+NT+ING  +  +M EA        E+   P+ ++Y +++ G
Sbjct: 559 LDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDG 618

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           ++     D AL ++ EM  F V PN VTYT+L+ G C + ++    K   EM E+ +   
Sbjct: 619 FIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL-EL 677

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D + +  L+   CK   + +A D+   ++ + +      Y  +I  F      + A+   
Sbjct: 678 DVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWY 737

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
            K++   I          +  +Y  +I  L   G+   A   + +++ KG++ D + F+ 
Sbjct: 738 KKMINDRI--------PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 789

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+ G   +G  ++A +I++ M R+ +      Y  LI  Y R+G   +A T  D M++ G
Sbjct: 790 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 849

Query: 480 HSPASSLFRSVMESLFEDGR 499
             P    +  ++   F+  R
Sbjct: 850 LVPDDVTYDILINGKFKGDR 869



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 66/120 (55%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y  L   +L+ GR + A   + +MLS+GI P   T++V++ G     +LE A +  E+M
Sbjct: 751 TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 810

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
             + ++  V+ YNT+I GY R   + EA  L  EM ++ + P  ++Y  +I G    +R+
Sbjct: 811 DRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 870


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 219/473 (46%), Gaps = 25/473 (5%)

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +   S D VTY ++I G  + K++++A     +M  K   P V +YT +I       R  
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +A +  +EM + ++ PN VTYT L+ GLC  G++ E   +L +M ++ +P      +  L
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA--VTYNSL 121

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   CK+   + A D+L+ M+      +   Y  LI  FCK++  D A+++ ++LV +  
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG- 180

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSK 426
             RP      +  +Y+ +I  LC  G+  +A   F +++K G   P  V +N+LI G  +
Sbjct: 181 -FRP------DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G  D A  +++ M   G   D   Y  L+  + +     DA   L+ M   G +P    
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F S+M+ L  + R+  A  ++  M  K     +     IL+       +EEA  R  ++ 
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA--RKFMLE 351

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
           +    PN   F+ ++  L +  ++  A++L++    R C  D+  Y  V+D L    K  
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVD 411

Query: 604 NAYSILFKIMEK-GGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGS 655
            A  +  K++E+ G + +  +   LI GL   G   +A       RG + +G 
Sbjct: 412 EACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA-------RGYIEKGC 457



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 238/500 (47%), Gaps = 32/500 (6%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y +L + + +  R   A  +  KM+S+G  P  +TY  ++    +  +L  A +F E+M
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            +R ++ +VVTY  +I+G  +  ++DEA  L ++M++K + PT ++Y ++I G    ERA
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +A  + +EM      P+  TYT L+ G C + K  +  +V  ++V R   P D   +  
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP-DVVTYSC 190

Query: 308 LLGVQCKSGHLNAAADVLKAMIRL-SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
           L+   CK G L  A D+   MI+  S       Y  LI  FC+    D A+ LL+++ E 
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHS 425
                  S+ D+   +Y  ++   C   +   A     Q+ +KG+  D V F +L+ G  
Sbjct: 251 ------GSSPDV--VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           +E     A  I+  M R+        Y  +++ Y R  +  +A+     M+E+   P + 
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---MLEEMDCPPNV 359

Query: 486 L-FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI-- 542
           + F  ++  L +  R   A  +++    +    ++ +   +++ L     V+EA  R+  
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC-RVYR 418

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLG---RDCIIDLASYEKVLDAL 596
            ++ + G +PN   + +L++ L   G       +LD   G   + C+ ++ +Y  ++DA 
Sbjct: 419 KMLEEPGCLPNSITYSTLITGLCNAG-------MLDRARGYIEKGCVPNIGTYNLLIDAF 471

Query: 597 LAAGKTLNAYSILFKIMEKG 616
             A +  +A  +L  ++++G
Sbjct: 472 RKANRDEDARELLDDMVQRG 491



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 220/484 (45%), Gaps = 35/484 (7%)

Query: 30  LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
           L   K  E AL F   +   G F+ D  T+  +I  L    +L+ AR  L +M  + +  
Sbjct: 21  LCKVKRLEQALIFLGKMVSKG-FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTP 79

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           +   + VLI+   K G V E+V +   M++  V  +V +Y++L   + +  R   A    
Sbjct: 80  NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLL 138

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
            +M+  G  P   TY  ++ GF  S K + A+R FE + +RG   DVVTY+ +I+G  + 
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198

Query: 210 KKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
            ++ EA  LF  M K  +  P  ++Y ++I G+  + + D+A+ + + M      P+ VT
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           YT L+ G C   ++ +   +L +M  + + P D   F  L+   C+   L+ A  +L  M
Sbjct: 259 YTTLMNGFCKLARLDDAYDLLNQMTRKGLTP-DVVTFTSLMDGLCRENRLSDAVHILGEM 317

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLL-------DKLVEKEIILRPQSTLDMEAS 381
            R S       Y  +++ +C+A   + A K +         +V   I++R    ++  + 
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSE 377

Query: 382 S------------------YNPMIQHLCHNGQTGKAEIFFRQLMKK-GVL-DPVAFNNLI 421
           +                  Y  +I  LC   +  +A   +R+++++ G L + + ++ LI
Sbjct: 378 AMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLI 437

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G    G  D A   ++    +G   +   Y  LI+++ +     DA+  LD M++ G  
Sbjct: 438 TGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFG 493

Query: 482 PASS 485
              S
Sbjct: 494 GVQS 497



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/484 (23%), Positives = 214/484 (44%), Gaps = 34/484 (7%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI+   K   +++++     M   G    V +Y A+   +    R   A+++  +M 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           +  + P   TY V++ G     +++ A+     M+ + +    VTYN++I+G  + ++  
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGLCKAERAS 132

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  L  EM      P + +YTT+I G+   +++DDALR+F+++ +   +P+ VTY+ L+
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC  G++ E   +   M++      +   +  L+   C+ G ++ A ++L+ M     
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLD------------- 377
             +   Y  L+  FCK    D A  LL+++  K +   ++   S +D             
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312

Query: 378 -----------MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSK 426
                          +YN ++   C   Q  +A  F  + M     + V+FN +IRG  K
Sbjct: 313 ILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPP-NVVSFNIMIRGLCK 371

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED-GHSPASS 485
                 A E+V+   RR    D   Y  +I+   R+ +  +A      M+E+ G  P S 
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            + +++  L   G +  A    +  +EKG   N+     +++A       E+A   +D M
Sbjct: 432 TYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487

Query: 546 MQSG 549
           +Q G
Sbjct: 488 VQRG 491


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 154/662 (23%), Positives = 284/662 (42%), Gaps = 71/662 (10%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMI--EILGRVGKLNHARCILLDMPKKGV--------- 87
           AL+F  WV +         TH+  I   IL R     +A+ IL  + + GV         
Sbjct: 28  ALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVFGAL 87

Query: 88  -------QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
                  + +  +F++LI  Y ++G+V ++++ F +M   G   SV + + L   +++  
Sbjct: 88  MNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKER 147

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +      +F +ML+  + P   T+N+++    +  KL+ A    + M+  G    VVTYN
Sbjct: 148 KVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYN 207

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIE-------------------------------- 228
           T++N Y +  +   A +L  +M  K IE                                
Sbjct: 208 TVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKR 267

Query: 229 ---PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
              P  I+Y ++I G+V   +   A RIF EM   ++ PN VTY AL+ G C  G   + 
Sbjct: 268 MISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQA 327

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
             +L EM+E   P  +   +  LL   C+      +  +L+ M    +      Y  +I+
Sbjct: 328 LTIL-EMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMID 386

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             C+  + + ++KLLDK+++  ++  P      +  +++ +I   C  G+    +    +
Sbjct: 387 GLCRNGLLNESVKLLDKMLKDGVV--P------DVVTFSVLINGFCRVGKIKNVKEIICK 438

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC--LIESYLRK 462
           + K G+  + + +  LI  + K G+   AF++   M R G   DA+ +IC  L+ S  + 
Sbjct: 439 MYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGY--DANCFICNVLVSSLCKD 496

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G+   A+     M + G+ P S  F  ++      G    A  +   M++ G   +    
Sbjct: 497 GKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTY 556

Query: 523 AKILEALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLG 579
             +L+AL   G  +EA   L ++  +  +     ++++L    + G    AV L D  + 
Sbjct: 557 GGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQ 616

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS-SDKLIAGLNQEGNTK 638
           R+ + D  +Y  +   L+  GK + A      ++ KG V+  K      + GL + G +K
Sbjct: 617 RNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSK 676

Query: 639 QA 640
            A
Sbjct: 677 AA 678



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 139/605 (22%), Positives = 259/605 (42%), Gaps = 58/605 (9%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I +L   GKL  A  +L  M + G       +  ++  Y KKG  + ++++ 
Sbjct: 167 DVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELI 226

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M   G+E    +Y+ L   + +  R         KM    I P   TYN ++ GF   
Sbjct: 227 DQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKE 286

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K+  A R F++M    +  + VTYN +I+G+      ++A  +   M+    +P  +SY
Sbjct: 287 GKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSY 346

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + ++ G     + + +  I + M+   +    + YTA++ GLC  G + E  K+L +M++
Sbjct: 347 SALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLK 406

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D   F  L+   C+ G +    +++  M +  +   +  Y  LI N+CK     
Sbjct: 407 DGVVP-DVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKT---- 461

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSY--NPMIQHLCHNGQTGKAEIFFRQLMKKG-V 411
                   +VE   +    S +  +A+ +  N ++  LC +G+ G AE FF  + K G V
Sbjct: 462 ------GDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNV 515

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            + + F+ +I G+   GN   AF +                                   
Sbjct: 516 PNSITFDCIINGYGNSGNGLKAFSM----------------------------------- 540

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA--KILEAL 529
            D MI+ GH P+   +  ++++L   G+ + A R++  +    +   +D V    IL   
Sbjct: 541 FDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL--HYIPSAVDTVTYNTILVET 598

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII-D 585
              G + +A+   D M+Q   +P+   +  + + L  +GK +AA+      LG+  +  +
Sbjct: 599 FKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPE 658

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN-TKQADILS 644
              Y   +D L  AG++  A      + + G   D  +++ ++ G ++ G   K  DI +
Sbjct: 659 KVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFT 718

Query: 645 RMIRG 649
            M  G
Sbjct: 719 MMWSG 723



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 147/624 (23%), Positives = 263/624 (42%), Gaps = 23/624 (3%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N E AL     +E  G    +  ++  ++  L R  K   ++ IL  M   G+      +
Sbjct: 323 NFEQALTILEMMEATGP-KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAY 381

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             +I+   + G++ ESVK+ D M + GV   V ++  L     R G+    K    KM  
Sbjct: 382 TAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYK 441

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G+ P    Y  +++ +  +  +  A + +  M   G   +    N +++   +  K+  
Sbjct: 442 AGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGV 501

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           AE  F  M +    P  I++  +I GY        A  +FDEM      P+  TY  LL 
Sbjct: 502 AEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLK 561

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC-KSGHLNAAADVLKAMIRLSI 333
            LC AGK  E +++L ++   YIP   ++V    + V+  KSG L  A  +   M++ ++
Sbjct: 562 ALCRAGKFKEAKRLLDKL--HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNV 619

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             ++  Y I+     +      A+     L+ K  +  P+  +      Y   +  L   
Sbjct: 620 LPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAV-SPEKVM------YTTFVDGLFRA 672

Query: 394 GQTGKAEIFFRQLMKKGVL--DPVAFNNLIRGHSKEGNPDSAFEIVKIM--GRRGVPRDA 449
           GQ+ KA ++F + M+K  L  D +A N ++ G+S+ G    A +I  +M  G    P  A
Sbjct: 673 GQS-KAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLA 731

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  L+  Y +K   +      + M+  G  P      S++    +   +    +++K 
Sbjct: 732 -TYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKK 790

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGK 566
           M+  GV  +      ++        V +A   +++M      P+    DS++SVLS    
Sbjct: 791 MLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVST 850

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              +  LL   L R CI D   Y  +++ +   G    A+  L   ME  G++    ++ 
Sbjct: 851 VQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFK-LKDEMEALGISSGDVAES 909

Query: 627 -LIAGLNQEGNTKQAD-ILSRMIR 648
            L+ GL + G  ++A  +L  M+R
Sbjct: 910 ALVRGLAKCGKVEEAKLVLDFMLR 933



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 127/605 (20%), Positives = 245/605 (40%), Gaps = 54/605 (8%)

Query: 55   DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
            D  T   +I    RVGK+ + + I+  M K G+  +  ++  LI +Y K G V E+ K++
Sbjct: 412  DVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVY 471

Query: 115  DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
              M ++G + +    + L   + + G+  +A+ +F+ M   G  P   T++ ++ G+  S
Sbjct: 472  VAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNS 531

Query: 175  LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
                 A   F++M   G      TY  ++    R  K  EA++L  ++         ++Y
Sbjct: 532  GNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTY 591

Query: 235  TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             T++          DA+ +FDEM   +V P++ TY  +  GL   GKMV        ++ 
Sbjct: 592  NTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLG 651

Query: 295  R-YIPPKD----------------------------NSVFMKLLGVQC------KSGHLN 319
            +  + P+                             N +   L+          + G + 
Sbjct: 652  KGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMA 711

Query: 320  AAADVLKAMIR-LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A D+   M   ++I      Y IL+  + K +   +   L + ++   I   P      
Sbjct: 712  KAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIF--PDKL--- 766

Query: 379  EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
               + + +I   C +          ++++  GV +D   FN LI  + +      AF++V
Sbjct: 767  ---TCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLV 823

Query: 438  KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             IM    +  D   +  +I    R     ++   L  M+E G  P    + +++  +   
Sbjct: 824  NIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRM 883

Query: 498  GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NF 554
            G +  A ++   M   G+       + ++  L   G VEEA   +D M++   +P    F
Sbjct: 884  GHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATF 943

Query: 555  DSLLSVLSEKGKTIAAVKL---LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             +L+ +       + A+KL   +DFC   D  +D+ +Y  ++  L A G   +A  +  +
Sbjct: 944  TTLMHMFCRNESLVEALKLKDTMDFC---DVKLDVIAYNVLISGLCADGDVASALKLYKE 1000

Query: 612  IMEKG 616
            I ++G
Sbjct: 1001 IKQRG 1005



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 117/538 (21%), Positives = 236/538 (43%), Gaps = 59/538 (10%)

Query: 29   VLHGAKNSEHALQFFRWVE---RAGLFNHDRE-THLKMIEILGRVGKLNHARCILLDMPK 84
            +++G  NS + L+ F   +   +AG  +H    T+  +++ L R GK   A+ +L  +  
Sbjct: 524  IINGYGNSGNGLKAFSMFDEMIKAG--HHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHY 581

Query: 85   KGVQWDEDMFE-VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
                 D   +  +L+E++ K G++ ++V +FD M Q  V     +Y  +F  ++RRG+ +
Sbjct: 582  IPSAVDTVTYNTILVETF-KSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMV 640

Query: 144  MAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A  ++  +L +G + P +  Y   + G F + + + A+ F EDM+  G+  D++  N +
Sbjct: 641  AALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVI 700

Query: 203  INGYNRFKKMDEAEKLFAEMKEK-NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            +NGY+R  KM +A  +F  M     I P++ +Y  ++ GY   +       +++ M    
Sbjct: 701  LNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTG 760

Query: 262  VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            + P+ +T  +L+ G C                                    KS  L+  
Sbjct: 761  IFPDKLTCHSLILGFC------------------------------------KSAMLDVG 784

Query: 322  ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
              +LK M+   +  +   + +LI  +C+ +   +A  L++ +   +I   P  T      
Sbjct: 785  LKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIF--PDMT------ 836

Query: 382  SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            +++ +I  L       ++ +   +++++G + D   +  L+    + G+   AF++   M
Sbjct: 837  THDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEM 896

Query: 441  GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
               G+     A   L+    + G+  +AK  LD M+     P  + F ++M     +  +
Sbjct: 897  EALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESL 956

Query: 501  QTASRVMKSMVEKGVKENLDLVAK--ILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
              A ++  +M    VK  LD++A   ++  L   G V  AL     + Q G  PN  +
Sbjct: 957  VEALKLKDTMDFCDVK--LDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTT 1012



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 131/277 (47%), Gaps = 5/277 (1%)

Query: 27   YNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            YN+L HG    KN       +  + R G+F  D+ T   +I    +   L+    +L  M
Sbjct: 733  YNILLHGYAKKKNLSKCSNLYNIMMRTGIFP-DKLTCHSLILGFCKSAMLDVGLKLLKKM 791

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               GV  D+  F +LI  Y +   V ++  + +IM    +   + ++D++  ++ R    
Sbjct: 792  LLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTV 851

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              +    ++ML  G  P R  Y  ++        +  A +  ++M++ GIS   V  + +
Sbjct: 852  QESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESAL 911

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            + G  +  K++EA+ +   M  K++ PT+ ++TT++  +   E   +AL++ D M   DV
Sbjct: 912  VRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDV 971

Query: 263  KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
            K + + Y  L+ GLC  G +    K+ +E+ +R + P
Sbjct: 972  KLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWP 1008



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 2/198 (1%)

Query: 43   FRWVERAGLFN--HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
            F  V    LF+   D  TH  +I +L RV  +  +  +L +M ++G   D   +  L+  
Sbjct: 820  FDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNR 879

Query: 101  YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
              + G +  + K+ D M+ LG+     +  AL + + + G+   AK   + ML + + PT
Sbjct: 880  MCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPT 939

Query: 161  RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
              T+  ++  F  +  L  A++  + M    + LDV+ YN +I+G      +  A KL+ 
Sbjct: 940  IATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYK 999

Query: 221  EMKEKNIEPTVISYTTMI 238
            E+K++ + P + +Y  +I
Sbjct: 1000 EIKQRGLWPNMTTYCILI 1017


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 212/465 (45%), Gaps = 20/465 (4%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K       D ++ +++S  K G++ +++++F+ MK      S+ +Y+ L       G 
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 142 YMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +  A   F  M  E  +EP R TYN ++ G   S   E A +   +M+ + I+ +V TY+
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++I    +  K +E+ K+  EM      P V ++  +++G+      + A  ++  M   
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER---YIPPKDNSVFMKLLGVQCKSGH 317
             KP+ V+Y  L+ GL   GK+ E  K+L EM  R   Y+P  +   F  L+   C++G 
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVP--NVITFSTLIHGLCRTGE 238

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           L  A +V  +M+          Y  LI   C+AE   +A +L +K+         Q+ + 
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMT--------QACIP 290

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFE 435
            +A +YN +I   C  G   +AE  +R++     L P  V FN LI G  K G    A E
Sbjct: 291 PDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANE 350

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH--SPASSLFRSVMES 493
           +V  MG +G+  D   Y  LI    R  +  +A      M E      P S +  S +  
Sbjct: 351 LVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV--SFVGG 408

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           L + G +  A  V ++  + G   N +    + E+L+  G VE+A
Sbjct: 409 LCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 453



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 193/398 (48%), Gaps = 21/398 (5%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +K V+ D   +  LI      G  + + K+   M+   +  +V +Y ++ K +++  +  
Sbjct: 74  EKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPE 133

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            + +   +M++ G  P    +N ++ GF  S  +E A   ++ M   G   D V+Y+ +I
Sbjct: 134 ESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILI 193

Query: 204 NGYNRFKKMDEAEKLFAE--MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +G  +  K+DE+ K+ +E  M+     P VI+++T+I G       + AL +F  M    
Sbjct: 194 HGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG 253

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            KPN  TYT L+ GLC A K+++ +++  +M +  IPP D   +  L+   CK G ++ A
Sbjct: 254 CKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPP-DAVAYNSLIAGYCKRGSMDEA 312

Query: 322 ADVLKAM-----IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
             + + M     ++ +I T    +  LI+ FCK     RA +L+ ++  K         L
Sbjct: 313 EKLYREMSGGAGLQPTIVT----FNTLIDGFCKLGKLGRANELVAEMGTK--------GL 360

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPDSAFE 435
             +  +Y  +I  L    +  +A   ++Q+  KK +LDPV+  + + G  K GN D A+ 
Sbjct: 361 AADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYA 420

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           + +   + G   + + +  L ES ++ G   DA+  ++
Sbjct: 421 VFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 188/409 (45%), Gaps = 12/409 (2%)

Query: 13  KIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           K  + VP    +N++ N    A     AL  F+ ++R      DR T+  +I  L   G 
Sbjct: 37  KSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGN 96

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
              AR +L +M  K +  +   +  +I+S  K+   +ES K+ + M   G    V +++ 
Sbjct: 97  TEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNG 156

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR- 190
           + +   R      A+  +  M+  G +P   +Y++++ G     KL+ +++   +M  R 
Sbjct: 157 VMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRA 216

Query: 191 -GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G   +V+T++T+I+G  R  ++++A ++F  M E   +P   +YTT+I G    E+   
Sbjct: 217 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQ 276

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A  +F++M    + P+AV Y +L+ G C  G M E +K+ REM            F  L+
Sbjct: 277 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 336

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              CK G L  A +++  M    +  +   Y ILI    +A   D A+++  ++ EK+ +
Sbjct: 337 DGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFL 396

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAF 417
           L P S +          +  LC  G   +A   F    K G V +P  F
Sbjct: 397 LDPVSCVS--------FVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 437



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 151/323 (46%), Gaps = 19/323 (5%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  ++++  KA M  +A+++ + +  +  +  P         +YN +I   C+ G+ GKA
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCV--PSLV------TYNVLINSRCNAGEFGKA 64

Query: 400 EIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
              F+ + ++  ++P    +N LI G    GN + A +++  M  + +  +   Y  +I+
Sbjct: 65  LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIK 124

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
           S +++ +P ++   L+ M+  G +P    F  VM+       ++ A  V + MVE G K 
Sbjct: 125 SLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKP 184

Query: 518 NLDLVAKILEALLMRGHVEEALGRID--LMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
           +      ++  L   G ++E+L  +    M  +G VPN   F +L+  L   G+   A++
Sbjct: 185 DNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALE 244

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           +    L   C  +  +Y  ++  L  A K + A  +  K+ +     D  + + LIAG  
Sbjct: 245 VFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYC 304

Query: 633 QEGNTKQADILSRMIRGEMSRGS 655
           + G+  +A+ L R    EMS G+
Sbjct: 305 KRGSMDEAEKLYR----EMSGGA 323



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 118/251 (47%), Gaps = 1/251 (0%)

Query: 48  RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV 107
           RA  +  +  T   +I  L R G+L  A  +   M + G + ++  +  LI    +   V
Sbjct: 215 RAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKV 274

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS-EGIEPTRHTYNV 166
            ++ ++F+ M Q  +     +Y++L     +RG    A++ + +M    G++PT  T+N 
Sbjct: 275 IQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNT 334

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++ GF    KL  A     +M ++G++ D  TY  +I G +R  K+DEA +++ +M+EK 
Sbjct: 335 LIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKK 394

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
                +S  + + G       D A  +F+  +     PN  T+  L   L   G++ + Q
Sbjct: 395 FLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQ 454

Query: 287 KVLREMVERYI 297
           K++     R I
Sbjct: 455 KLMEPAKARDI 465



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/362 (19%), Positives = 153/362 (42%), Gaps = 49/362 (13%)

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K+G L  A +V + M   S       Y +LI + C A  + +A+ L   +       + +
Sbjct: 22  KAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM-------KRE 74

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDS 432
             ++ +  +YN +I  LC +G T  A     ++  K +   V  ++++I+   KE  P+ 
Sbjct: 75  KRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEE 134

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           ++++++ M   G   D  A+  +++ + R      A+     M+E G+ P +  +  ++ 
Sbjct: 135 SYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIH 194

Query: 493 SLFEDGRVQTASRVMKSMVEK--GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
            L + G++  + +++  M  +  G   N+   + ++  L   G +E+AL     M+++G 
Sbjct: 195 GLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGC 254

Query: 551 VPN---FDSLLSVLSEKGKTIAAVKLLD----FCLGRDCII------------------- 584
            PN   + +L++ L    K I A +L +     C+  D +                    
Sbjct: 255 KPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEK 314

Query: 585 -------------DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
                         + ++  ++D     GK   A  ++ ++  KG   D  +   LIAGL
Sbjct: 315 LYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGL 374

Query: 632 NQ 633
           ++
Sbjct: 375 SR 376


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 147/649 (22%), Positives = 281/649 (43%), Gaps = 55/649 (8%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  +L   KN   AL  F  V R   ++H       +++ L     + H   I+  +  +
Sbjct: 13  VIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQ 72

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMM 144
             +  ED+   +I++Y K  +  +++ IF  M ++ G +  ++SY++L   ++   ++  
Sbjct: 73  KCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDE 132

Query: 145 AKRYFNKMLSEGIEPTRHTYNVM-------------------LW--GFFLSL-------- 175
           A+ +F    + G+ P   TYN++                   +W  GF   +        
Sbjct: 133 AESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN 192

Query: 176 ------KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD--EAEKLFAE-MKEKN 226
                  +  A++ F++M  RG++ DV  YN +I+G+  FKK D   A +++   +K  +
Sbjct: 193 SLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGF--FKKGDILNASEIWERLLKGPS 250

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           + P + SY  MI G     + D++  I+  MK  +   +  TY+ L+ GLC +G +    
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           +V +EM E  + P D  V+  +L    ++G +    ++ K M +    T    Y ILI  
Sbjct: 311 RVYKEMAENGVSP-DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRG 368

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQ 405
             +    D AI + + L EK+           ++ +Y  ++  LC NG   KA  I    
Sbjct: 369 LFENAKVDEAISIWELLPEKDCC--------ADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 406 LMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
              +G LD  A++++I G  +EG  D    ++  M + G   +      +I  ++R  + 
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            DA     +M+  G  P    + +++  L +  R   A  ++K M+ KG K N+   + +
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL 540

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           +  L     ++ AL      ++ G  P+    + ++  L   GK   A++L      R C
Sbjct: 541 MNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKC 600

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           + +L ++  +++          A  I   I++ G   D  S +  + GL
Sbjct: 601 VPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGL 649



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 254/584 (43%), Gaps = 18/584 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L  +   + A  FF + E  GL + + +T+  +I+I  R  + + A+ +L  M
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGL-SPNLQTYNILIKISCRKKQFDKAKELLNWM 175

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++G   D   +  LI S  K G + +++K+FD M + GV   V  Y+ L     ++G  
Sbjct: 176 WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI 235

Query: 143 MMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           + A   + ++L    + P   +YNVM+ G     K + +   +  MK      D+ TY+T
Sbjct: 236 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G      +D A +++ EM E  + P V+ Y TM+ GY+   R ++ L ++  M+   
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +   V+Y  L+ GL +  K+ E   +   + E+     D+  +  L+   CK+G+LN A
Sbjct: 356 CR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDC-CADSMTYGVLVHGLCKNGYLNKA 413

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +L+         +   Y  +I   C+    D    +LD++ +      P         
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC------ 467

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIM 440
             N +I       +   A  FF  ++ KG     V +N LI G SK      A+ +VK M
Sbjct: 468 --NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 441 GRRGVPRDADAYICLIESYLRKGEPAD-AKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
             +G   +   Y  L+   L +G+  D A       +E G  P   +   ++  L   G+
Sbjct: 526 LHKGWKPNMITYSLLMNG-LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           V+ A ++   M ++    NL     ++E        E A    D ++Q G  P+   ++ 
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNI 644

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            L  L    +   AV  L+  + R  +    ++  ++ A+L  G
Sbjct: 645 TLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 41/311 (13%)

Query: 14  IRALVPQFD---HNLVYNVL-HGAKNSEHALQFFRWVERA--GLFNHDRETHLKMIEILG 67
           I  L+P+ D    ++ Y VL HG   + +  +    +E A  G  + D   +  MI  L 
Sbjct: 381 IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 440

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R G+L+    +L  M K G + +  +   +I  + +   ++++++ F  M   G   +V 
Sbjct: 441 REGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 500

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY----------------------- 164
           +Y+ L   + +  R+  A     +ML +G +P   TY                       
Sbjct: 501 TYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 560

Query: 165 ------------NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
                       N+++ G   S K+E A++ + +MK R    ++VT+NT++ G+ + +  
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDF 620

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A K++  + +   +P +ISY   +KG  +  R  DA+   ++     V P A+T+  L
Sbjct: 621 ERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNIL 680

Query: 273 LPGLCDAGKMV 283
           +  + D G + 
Sbjct: 681 VRAVLDNGALT 691


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 208/438 (47%), Gaps = 12/438 (2%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M+  G E +V +Y++L   + +      A+  F  M S    P+  TYN +L G F + K
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           LE A+  F++M  R  S DV+++N ++ G  R  K++ A + F +M ++   P VI+Y+ 
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G     R   A+ + + MK+    P+ +TYT L+ GLC   K+    +VLREM++  
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
             P +   +  LL   C++  ++ A  +++ M           YG LI+  CK      A
Sbjct: 179 CVP-NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
             +L  +++K        T D+    YN +I  LC   Q  ++    R+ +  G+  D V
Sbjct: 238 CAMLADMIDK------GGTPDLMI--YNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 289

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            ++++I G  +    D A  ++  +  RG P D   Y  LI+   + G+  +A    + M
Sbjct: 290 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 349

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
             DG       + ++++ L + GRV  A  ++  MV  G   +      +++ L    H+
Sbjct: 350 TGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHL 409

Query: 536 EEALGRIDLMMQSGSVPN 553
           +EA+  ++ M +S   P+
Sbjct: 410 DEAIELVEEMERSNCAPS 427



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 188/391 (48%), Gaps = 14/391 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + VLI+   K   V ++V++ + MK  G    V +Y  L   + +  +   A     +ML
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P   TYN +L G   + ++  A+    DM  RG + +VVTY T+I+G  +  ++ 
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  + A+M +K   P ++ Y  +I G    ++ D+++ +     S  +KP+ VTY++++
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC + ++ E  ++L  +  R  PP D  ++  L+   CK+G ++ A D+ + M     
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSRGCPP-DVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC 354

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y  LI+  CKA   D A  LL ++V       P ST+     +YN +I+ LC  
Sbjct: 355 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGT---PPSTM-----TYNSLIKGLCDL 406

Query: 394 GQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDS-AFEIVKIMGRRGVPRDAD 450
               +A I   + M++    P  V +N LI G  +    DS A +  + M   GV  D  
Sbjct: 407 NHLDEA-IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHI 465

Query: 451 AYICLIESYLRKGEPADAK-TALDSMIEDGH 480
            Y  L+E   +  +  + +   LD M++ G+
Sbjct: 466 TYSILLEGLKKSKDLHELRHLVLDQMVQLGY 496



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 194/424 (45%), Gaps = 17/424 (4%)

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M++   EP V++Y ++I G       D A  +F+ MKS +  P+ VTY  LL GL   GK
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           +     + +EM++R     D   F  L+   C++G +  A +  + M     P     Y 
Sbjct: 61  LERAMALFQEMLDRR--SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVI-TYS 117

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
           +LI+  CKA    +A++LL+ +  +     P      +  +Y  ++  LC   +   A  
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGC--SP------DVITYTILVDGLCKESKVAAAWE 169

Query: 402 FFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
             R+++  G V + V +N+L+ G  +      A  +++ M  RG   +   Y  LI+   
Sbjct: 170 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 229

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           + G   DA   L  MI+ G +P   ++  ++  L +  +V  +  +++  V  G+K ++ 
Sbjct: 230 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 289

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN----FDSLLSVLSEKGKTIAAVKLLDF 576
             + ++  L     ++EA  R+ L ++S   P     + +L+  L + GK   A  L + 
Sbjct: 290 TYSSVIYGLCRSNRLDEAC-RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 348

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
             G  C  D+ +Y  ++D L  AG+   A+ +L +++  G      + + LI GL    +
Sbjct: 349 MTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 408

Query: 637 TKQA 640
             +A
Sbjct: 409 LDEA 412



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 8/277 (2%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYN-VLHG---AKNSEHALQFFRWVERAGLFNHDRETHL 60
           AW    +      VP     + YN +LHG   A+    AL   R +   G    +  T+ 
Sbjct: 167 AWEVLREMLDAGCVPNL---VTYNSLLHGLCRARRVSDALALMRDMTCRGC-TPNVVTYG 222

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            +I+ L +VG++  A  +L DM  KG   D  ++ +LI    K   V ES+ +       
Sbjct: 223 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 282

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G++  V +Y ++   + R  R   A R    + S G  P    Y+ ++ G   + K++ A
Sbjct: 283 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 342

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
              +E M   G   DVVTY+T+I+G  +  ++DEA  L A M      P+ ++Y ++IKG
Sbjct: 343 FDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 402

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
              +   D+A+ + +EM+  +  P+AVTY  L+ G+C
Sbjct: 403 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMC 439



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/432 (21%), Positives = 167/432 (38%), Gaps = 86/432 (19%)

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M+    +PN VTY +L+ GLC   +                P +   +F  +  V+C   
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNE----------------PDRAQELFEHMKSVECSPS 44

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            +                     Y  L++   +    +RA+ L  +++++          
Sbjct: 45  MVT--------------------YNTLLDGLFRTGKLERAMALFQEMLDRR--------- 75

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEI 436
             +  S+N ++  LC  G+   A  FFR++  +   + + ++ LI G  K      A E+
Sbjct: 76  SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVEL 135

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M  RG   D   Y  L++   ++ + A A   L  M++ G  P    + S++  L  
Sbjct: 136 LESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCR 195

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
             RV  A  +M+ M  +G   N+     +++ L   G V++A   +  M+  G  P+   
Sbjct: 196 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 255

Query: 554 -----------------------------------FDSLLSVLSEKGKTIAAVKLLDFCL 578
                                              + S++  L    +   A +LL +  
Sbjct: 256 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 315

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNT 637
            R C  D+  Y  ++D L  AGK   A+  L+++M   G   D  +   LI GL + G  
Sbjct: 316 SRGCPPDVILYSTLIDGLCKAGKVDEAFD-LYEVMTGDGCDADVVTYSTLIDGLCKAGRV 374

Query: 638 KQAD-ILSRMIR 648
            +A  +L+RM+R
Sbjct: 375 DEAHLLLARMVR 386


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 148/634 (23%), Positives = 290/634 (45%), Gaps = 30/634 (4%)

Query: 19  PQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           P F  + ++   L  A+  E AL+  R ++  G +         ++  L R G++  A  
Sbjct: 174 PPFSAYTVLIGALAEARQPERALELLRQMQDVG-YEVSVPLFTTLVRALAREGQMEPALA 232

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           ++ ++    ++ D  ++ V I+ +GK G V  + K F  +K  G+     SY ++  ++ 
Sbjct: 233 LVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLC 292

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A+  F +M +E   P  + YN M+ G+  + + + A +  E ++ RG    VV
Sbjct: 293 KAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVV 352

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           ++N+++    + +K+DEA  LF  MK K+ +P + +Y  +I       R ++A +I DEM
Sbjct: 353 SFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEM 411

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSG 316
           +   + PN ++   ++  LC A ++ E  ++     ER   P  NSV +  L+    K G
Sbjct: 412 ELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNP--NSVTYCSLIDGLGKKG 469

Query: 317 HLNAAADVLKAMIRLSIPTEAGH------YGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
            ++ A  + + M+      +AGH      Y  LI NF      +   K+  +++ +    
Sbjct: 470 KIDDAYRLFEKML------DAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG-- 521

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGN 429
           RP  TL       N  +  +   G+  K    F  +   G L  V +++ LI G +K G 
Sbjct: 522 RPDLTL------LNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ 575

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
                 I + M ++G   DA AY  +++   + G+   A   L+ M      P  + + S
Sbjct: 576 ARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGS 635

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           +++ L +  R+  A  + +    KG++ N+ L + +++     G ++EA   ++ MM+ G
Sbjct: 636 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG 695

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
             PN   ++SL+  L +  +   A+          C  +  +Y  +++ L    K   A+
Sbjct: 696 LTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 755

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
               ++ ++G + +  +   +I+GL + GN   A
Sbjct: 756 VFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDA 789



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/629 (20%), Positives = 282/629 (44%), Gaps = 15/629 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+  +    A + + A +FF  ++  GL   D  ++  M+ +L + G+L  A  +   M
Sbjct: 249 YNVCIDCFGKAGSVDMAWKFFHELKAHGL-RPDDVSYTSMVWVLCKAGRLGEAEELFGQM 307

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +        +  +I  YG      ++ K+ + +++ G   SV S++++   + ++ + 
Sbjct: 308 EAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKV 367

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   F+ M  +  +P   TYN+++    ++ ++  A +  ++M+  G+  ++++ N M
Sbjct: 368 DEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIM 426

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++   +  +++EA ++F    E+   P  ++Y ++I G     + DDA R+F++M     
Sbjct: 427 VDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGH 486

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             N + YT+L+      G+  +  K+ +EM+ R   P D ++    +    K+G +    
Sbjct: 487 DANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRP-DLTLLNTYMDCVFKAGEVEKGR 545

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            + + M       +   Y ILI    KA        +   +         Q    ++A +
Sbjct: 546 AIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAM--------SQQGFALDARA 597

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN ++  LC +G+  KA     ++  K V   VA + +++ G +K    D A+ + +   
Sbjct: 598 YNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            +G+  +   Y  LI+ + + G   +A   L+ M++ G +P    + S+M++L +   + 
Sbjct: 658 SKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEID 717

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A    +SM E     N    + ++  L       +A      M + G +PN   + +++
Sbjct: 718 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMI 777

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
           S L++ G    A  L +       I D AS+  +++ +  A + + AY +  +   +G  
Sbjct: 778 SGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCR 837

Query: 619 TDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            + K+   L+  LN+    +QA I+  ++
Sbjct: 838 LNVKTCISLLDALNKTECLEQAAIVGAVL 866



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 210/456 (46%), Gaps = 12/456 (2%)

Query: 5   AWTTRLQNKIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
           A+  R + ++  L P     N++ + L  A   E A + F      G  N +  T+  +I
Sbjct: 404 AYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGC-NPNSVTYCSLI 462

Query: 64  EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
           + LG+ GK++ A  +   M   G   +  ++  LI ++   G  ++  KI+  M + G  
Sbjct: 463 DGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGR 522

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
             +   +     + + G     +  F  M S G  P   +Y++++ G   + +       
Sbjct: 523 PDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNI 582

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F+ M  +G +LD   YN +++G  +  K+D+A ++  EMK K++ PTV +Y +++ G   
Sbjct: 583 FQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAK 642

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
           ++R D+A  +F+E KS  ++ N + Y++L+ G    G++ E   +L EM+++ + P +  
Sbjct: 643 IDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP-NVY 701

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  L+    K+  ++ A    ++M  +        Y ILI   C+ + Y++A     ++
Sbjct: 702 TWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM 761

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIR 422
            ++ +I  P         +Y  MI  L   G    A  +F R     G+ D  +FN LI 
Sbjct: 762 QKQGLI--PNVV------TYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIE 813

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           G S    P  A+++ +    RG   +    I L+++
Sbjct: 814 GMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDA 849



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 221/510 (43%), Gaps = 30/510 (5%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K+ + M  LG      +  AL   ++R  R   A R    M      P    Y V++   
Sbjct: 127 KVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGAL 186

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + + E A+     M+  G  + V  + T++    R  +M+ A  L  E+K   +EP +
Sbjct: 187 AEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDI 246

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           + Y   I  +      D A + F E+K+  ++P+ V+YT+++  LC AG++ E +++  +
Sbjct: 247 VLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQ 306

Query: 292 M-VERYIPP--KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL----SIPTEAGHYGILI 344
           M  ER +P     N++ M         G      D  K + RL     IP+      IL 
Sbjct: 307 MEAERDVPCAYAYNTMIMGY-------GSAERFDDAYKLLERLRERGCIPSVVSFNSILT 359

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
               K    D A+ L D       +++  +  ++  S+YN +I  LC  G+  +A    R
Sbjct: 360 -CLGKKRKVDEALTLFD-------VMKKDAKPNI--STYNIIIDMLCMAGRVNEA-YKIR 408

Query: 405 QLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
             M+   L P  ++ N ++    K    + A  I +    RG   ++  Y  LI+   +K
Sbjct: 409 DEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKK 468

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G+  DA    + M++ GH     ++ S++ + F  GR +   ++ K M+ +G + +L L+
Sbjct: 469 GKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLL 528

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLG 579
              ++ +   G VE+     + M   G +P+  S   L+  L++ G+      +      
Sbjct: 529 NTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQ 588

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +   +D  +Y  V+D L  +GK   AY +L
Sbjct: 589 QGFALDARAYNAVVDGLCKSGKVDKAYEVL 618



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 144/658 (21%), Positives = 263/658 (39%), Gaps = 24/658 (3%)

Query: 1   MAERAWTTRLQNKIRALV---PQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE 57
            A  AWT  L   + + +   P   H++V  VL   KN   A  FF     +       +
Sbjct: 50  FAAPAWTPDLAGAVSSTLSSAPAPAHDVVVYVLRSLKNPSLAAPFFLLASASSSQPLPPD 109

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            +  ++  L     L     +L +M   G          L+ +  +   ++++ ++   M
Sbjct: 110 AYNAVLPFLSH--DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAM 167

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           + L       +Y  L   +    +   A     +M   G E +   +  ++       ++
Sbjct: 168 RHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQM 227

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A+   +++K   +  D+V YN  I+ + +   +D A K F E+K   + P  +SYT+M
Sbjct: 228 EPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSM 287

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +       R  +A  +F +M++    P A  Y  ++ G   A +  +  K+L  + ER  
Sbjct: 288 VWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGC 347

Query: 298 PPKDNSV--FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            P   S    +  LG + K        DV+K   + +I T    Y I+I+  C A   + 
Sbjct: 348 IPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNIST----YNIIIDMLCMAGRVNE 403

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A K+ D   E E+     + L     S N M+  LC   Q  +A   F    ++G   + 
Sbjct: 404 AYKIRD---EMEL-----AGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNS 455

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V + +LI G  K+G  D A+ + + M   G   +   Y  LI ++   G   D       
Sbjct: 456 VTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKE 515

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           MI  G  P  +L  + M+ +F+ G V+    + + M   G   ++   + ++  L   G 
Sbjct: 516 MIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ 575

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
             E       M Q G   +   +++++  L + GK   A ++L+    +     +A+Y  
Sbjct: 576 ARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGS 635

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIR 648
           ++D L    +   AY +  +   KG   +      LI G  + G   +A  IL  M++
Sbjct: 636 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMK 693


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 255/589 (43%), Gaps = 46/589 (7%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K+G   +  +  ++++   + G V E++ +   M +  V   + SY+ L   + +  +  
Sbjct: 137 KRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLK 196

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A     +M + G  P   T   ++ G     +++ A+   E MK +G   DVV Y T+I
Sbjct: 197 EAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLI 256

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G+     +D  ++LF EM  K I   V++Y+ ++ G   + +  +A  + + M    + 
Sbjct: 257 SGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIH 316

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ VTYT L+ GLC  G+      +L  MVE+   P  N  +  LL   CK G +  A  
Sbjct: 317 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP-SNVTYNVLLSGLCKEGLVIDAFK 375

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +L+ MI      +   Y  L++  C     D A+KL + + + E  L P         ++
Sbjct: 376 ILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN------VFTF 429

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I  LC  G+  KA    R+++KKG   + V +N L+ G  K G    A E+ K +  
Sbjct: 430 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 489

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G   ++  Y  LI+ + +      AK     M   G +PA   + ++M SL ++G ++ 
Sbjct: 490 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 549

Query: 503 ASRVMKS-----------------------------------MVEKGVKENLDLVAKILE 527
           A  + +                                    MVE G++ +    + ++ 
Sbjct: 550 AKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 609

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
            L   G ++EA   ++ M+ SG  P+   +DSLL  LS KG T   + LL     +  ++
Sbjct: 610 RLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL 669

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
           D      +L  L  + + ++   +L    +        S ++L+  L+Q
Sbjct: 670 DRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQLHQ 718



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 215/513 (41%), Gaps = 47/513 (9%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  ++  +I  L +  KL  A  +LL+M   G   +      L++   K G + E++++ 
Sbjct: 178 DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL 237

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + MK+ G +  V  Y  L       G     K  F++ML +GI     TY+ ++ G    
Sbjct: 238 EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRL 297

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + + A      M   GI  DVVTY  +I+G  +  +   A  L   M EK  EP+ ++Y
Sbjct: 298 GQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 357

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV- 293
             ++ G        DA +I   M     K + VTY  L+ GLCD GK+ E  K+   M  
Sbjct: 358 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 417

Query: 294 -ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR---------------------- 330
            E  + P +   F  L+G  CK G L  A  + + M++                      
Sbjct: 418 NENCLEP-NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 476

Query: 331 -------------LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                        L     +  Y ILI+ FCK  M + A  L  +       +R    L+
Sbjct: 477 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE-------MRTHG-LN 528

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
                YN ++  LC  G   +A+  F+++       D ++FN +I G  K G+     E+
Sbjct: 529 PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL 588

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G+  DA  +  LI    + GE  +AK+AL+ M+  G +P + ++ S+++ L  
Sbjct: 589 QMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSS 648

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
            G       ++  M  KG   +  +V+ IL  L
Sbjct: 649 KGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 681



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 252/582 (43%), Gaps = 53/582 (9%)

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           E+V +F       +  S  + + L   + R   Y +A   + +M    + P+  + + ++
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
             F  + K +        +  RG +++V   N ++ G  R   + EA  L  EM  K++ 
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P ++SY T+I G    ++  +A+ +  EM++    PN+VT T L+ GLC  G+M E  ++
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L  M ++     D  ++  L+   C +G+L+   ++   M+   I      Y  L+   C
Sbjct: 237 LEAMKKKGF-DADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 295

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +   +  A  +L+ + E  I   P      +  +Y  +I  LC +G+   A      +++
Sbjct: 296 RLGQWKEANTVLNAMAEHGI--HP------DVVTYTGLIDGLCKDGRATHAMDLLNLMVE 347

Query: 409 KGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
           KG  +P  V +N L+ G  KEG    AF+I+++M  +G   D   Y  L++    KG+  
Sbjct: 348 KGE-EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 406

Query: 467 DAKTALDSMI--EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
           +A    +SM   E+   P    F  ++  L ++GR+  A ++ + MV+KG   NL     
Sbjct: 407 EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 466

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN------------------------------- 553
           +L   L  G ++EA+     ++  G VPN                               
Sbjct: 467 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 526

Query: 554 -------FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
                  +++L++ L ++G    A  L       +C  D+ S+  ++D  L AG      
Sbjct: 527 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVK 586

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            +  K++E G   D  +   LI  L++ G   +A   L RM+
Sbjct: 587 ELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 628


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 262/569 (46%), Gaps = 18/569 (3%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L  A   L  M   G+  D   +  L+ ++ +KG++ E+  +   MK+ GV  +  +Y
Sbjct: 218 GTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTY 277

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     R G    A +    M + G EP   TYNV+  G   + K++ A R  ++M+ 
Sbjct: 278 NTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMER 337

Query: 190 RGISL-DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            G  L DVVTYNT+ +   + +   +A +L  EM+EK ++ T++++  +IKG       +
Sbjct: 338 LGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELE 397

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            AL   ++M    + P+ +TY  L+   C AG + +   ++ EMV R +   D      +
Sbjct: 398 GALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGL-KLDTFTLNTV 456

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           L   CK      A  +L++  +     +   YG ++  + K    + A++L D+++EK+ 
Sbjct: 457 LYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKK- 515

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKE 427
                  L    S+YN +I+ L   G+  +A     +LM+KG V D   +N +I  + KE
Sbjct: 516 -------LTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKE 568

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G+ ++AF+    M       D      L+      G+   A    +S +E G       +
Sbjct: 569 GDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITY 628

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++++++ +DG V TA      M  +G++ +      +L AL   G  EEA   +  + +
Sbjct: 629 NTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAE 688

Query: 548 SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI---IDLAS--YEKVLDALLAAGKT 602
           SG++    S  S L +      A    D     + +    D AS  Y K+++ L  +G+ 
Sbjct: 689 SGTLSQ--SFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQF 746

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
             A +IL ++M+KG   D  +   L+ GL
Sbjct: 747 KEAKAILDEMMQKGMSVDSSTYITLMEGL 775



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 225/485 (46%), Gaps = 15/485 (3%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW-DEDMFEVLIESYGKKGIVQES 110
           F  D  T+  +   L + GK++ A  +  +M + G    D   +  L ++  K     ++
Sbjct: 305 FEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDA 364

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           +++ + M++ GV+ ++ +++ + K + + G    A    NKM  +G+ P   TYN ++  
Sbjct: 365 LRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHA 424

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
              +  +  A    ++M  RG+ LD  T NT++    + K+ +EA+ L     ++   P 
Sbjct: 425 HCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPD 484

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
            +SY T++  Y     ++ ALR++DEM    + P+  TY  L+ GL   G++ E    L 
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           E++E+ + P D++ +  ++   CK G L  A      M+  S   +      L+   C  
Sbjct: 545 ELMEKGLVP-DDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLN 603

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
              D+A+KL +  VEK           ++  +YN +IQ +C +G    A  FF  +  +G
Sbjct: 604 GKLDKALKLFESWVEKGK--------KVDVITYNTLIQTMCKDGDVDTALHFFADMEARG 655

Query: 411 VLDPVAF--NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA-D 467
            L P AF  N ++   S+ G  + A  ++  +   G    + +   L  S + + E   D
Sbjct: 656 -LQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKD 714

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           AKT  +  +E+    AS  +  ++  L   G+ + A  ++  M++KG+  +      ++E
Sbjct: 715 AKTE-EETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLME 773

Query: 528 ALLMR 532
            L+ R
Sbjct: 774 GLVKR 778



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 228/518 (44%), Gaps = 47/518 (9%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F  +++  + P  +T+N+++        L  A+     M+  G+S D VTYNT++N + R
Sbjct: 192 FRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCR 251

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
              + EA  L A MK+  + PT  +Y T++  Y  +     A ++ + M +   +P+  T
Sbjct: 252 KGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWT 311

Query: 269 YTALLPGLCDAGKMVEVQKVLREM---------VERYIPPKD-------NSVFMKLL--- 309
           Y  L  GLC AGK+ E  ++  EM         V  Y    D       +S  ++LL   
Sbjct: 312 YNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEM 371

Query: 310 ---GVQ-------------CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
              GV+             CK G L  A   L  M    +  +   Y  LI   CKA   
Sbjct: 372 REKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNI 431

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
            +A  L+D++V +         L ++  + N ++ +LC   +  +A+   +   ++G + 
Sbjct: 432 AKAYTLMDEMVRR--------GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMP 483

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D V++  ++  + KE N + A  +   M  + +      Y  LI+   R G   +A   L
Sbjct: 484 DEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKL 543

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           + ++E G  P  + +  ++ +  ++G ++ A +    MVE   K ++     ++  L + 
Sbjct: 544 NELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLN 603

Query: 533 GHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G +++AL   +  ++ G    V  +++L+  + + G    A+        R    D  +Y
Sbjct: 604 GKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTY 663

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             VL AL  AG+T  A ++L K+ E G ++   SS  L
Sbjct: 664 NVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLL 701



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 218/504 (43%), Gaps = 24/504 (4%)

Query: 2   AERAWTTRLQNKIRALVPQ-FDHNL-VYNVLHG----AKNSEHALQFFRWVERAGLFNHD 55
           A   W  +    + A+    F+ +L  YNVL      A   + A +    +ER G    D
Sbjct: 285 ARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPD 344

Query: 56  RETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD 115
             T+  + +   +    + A  +L +M +KGV+       ++I+   K G ++ ++   +
Sbjct: 345 VVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLN 404

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
            M   G+   V +Y+ L     + G    A    ++M+  G++    T N +L+      
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEK 464

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           + E A    +    RG   D V+Y T++  Y +    + A +L+ EM EK + P++ +Y 
Sbjct: 465 RYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYN 524

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           T+IKG   + R  +A+   +E+    + P+  TY  ++   C  G +    +   +MVE 
Sbjct: 525 TLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVEN 584

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P D      L+   C +G L+ A  + ++ +      +   Y  LI+  CK    D 
Sbjct: 585 SFKP-DVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDT 643

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           A+     +  +   L+P      +A +YN ++  L   G+T +A+    +L + G L   
Sbjct: 644 ALHFFADMEARG--LQP------DAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQS 695

Query: 416 AFNNLIRGHS---KEGNPDSAFEIVKIMGRRGVPRD--ADAYICLIESYLRKGEPADAKT 470
             + L++  S    E   D+  E   +      P+D  ++AY  L+      G+  +AK 
Sbjct: 696 FSSPLLKPSSVDEAESGKDAKTEEETVEN----PQDSASEAYTKLVNGLCTSGQFKEAKA 751

Query: 471 ALDSMIEDGHSPASSLFRSVMESL 494
            LD M++ G S  SS + ++ME L
Sbjct: 752 ILDEMMQKGMSVDSSTYITLMEGL 775


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 219/473 (46%), Gaps = 25/473 (5%)

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +   S D VTY ++I G  + K++++A     +M  K   P V +YT +I       R  
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +A +  +EM + ++ PN VTYT L+ GLC  G++ E   +L +M ++ +P      +  L
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA--VTYNSL 121

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   CK+   + A D+L+ M+      +   Y  LI  FCK++  D A+++ ++LV +  
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG- 180

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSK 426
             RP      +  +Y+ +I  LC  G+  +A   F +++K G   P  V +N+LI G  +
Sbjct: 181 -FRP------DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G  D A  +++ M   G   D   Y  L+  + +     DA   L+ M   G +P    
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F S+M+ L  + R+  A  ++  M  K     +     IL+       +EEA  R  ++ 
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA--RKFMLE 351

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
           +    PN   F+ ++  L +  ++  A++L++    R C  D+  Y  V+D L    K  
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVD 411

Query: 604 NAYSILFKIMEK-GGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGS 655
            A  +  K++E+ G + +  +   L+ GL   G   +A       RG + +G 
Sbjct: 412 EACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA-------RGYIEKGC 457



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 236/499 (47%), Gaps = 30/499 (6%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y +L + + +  R   A  +  KM+S+G  P  +TY  ++    +  +L  A +F E+M
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            +R ++ +VVTY  +I+G  +  ++DEA  L ++M++K + PT ++Y ++I G    ERA
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +A  + +EM      P+  TYT L+ G C + K  +  +V  ++V R   P D   +  
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP-DVVTYSC 190

Query: 308 LLGVQCKSGHLNAAADVLKAMIRL-SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
           L+   CK G L  A D+   MI+  S       Y  LI  FC+    D A+ LL+++ E 
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHS 425
                  S+ D+   +Y  ++   C   +   A     Q+ +KG+  D V F +L+ G  
Sbjct: 251 ------GSSPDV--VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           +E     A  I+  M R+        Y  +++ Y R  +  +A+     M+E+   P + 
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---MLEEMDCPPNV 359

Query: 486 L-FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
           + F  ++  L +  R   A  +++    +    ++ +   +++ L     V+EA      
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419

Query: 545 MM-QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLG---RDCIIDLASYEKVLDALL 597
           M+ + G +PN   + +L++ L   G       +LD   G   + C+ ++ +Y  ++DA  
Sbjct: 420 MLEEPGCLPNSITYSTLVTGLCNAG-------MLDRARGYIEKGCVPNIGTYNLLIDAFR 472

Query: 598 AAGKTLNAYSILFKIMEKG 616
            A +  +A  +L  ++++G
Sbjct: 473 KANRDEDARELLDDMVQRG 491



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 220/484 (45%), Gaps = 35/484 (7%)

Query: 30  LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
           L   K  E AL F   +   G F+ D  T+  +I  L    +L+ AR  L +M  + +  
Sbjct: 21  LCKVKRLEQALIFLGKMVSKG-FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTP 79

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           +   + VLI+   K G V E+V +   M++  V  +V +Y++L   + +  R   A    
Sbjct: 80  NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLL 138

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
            +M+  G  P   TY  ++ GF  S K + A+R FE + +RG   DVVTY+ +I+G  + 
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198

Query: 210 KKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
            ++ EA  LF  M K  +  P  ++Y ++I G+  + + D+A+ + + M      P+ VT
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           YT L+ G C   ++ +   +L +M  + + P D   F  L+   C+   L+ A  +L  M
Sbjct: 259 YTTLMNGFCKLARLDDAYDLLNQMTRKGLTP-DVVTFTSLMDGLCRENRLSDAVHILGEM 317

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLL-------DKLVEKEIILRPQSTLDMEAS 381
            R S       Y  +++ +C+A   + A K +         +V   I++R    ++  + 
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSE 377

Query: 382 S------------------YNPMIQHLCHNGQTGKAEIFFRQLMKK-GVL-DPVAFNNLI 421
           +                  Y  +I  LC   +  +A   +R+++++ G L + + ++ L+
Sbjct: 378 AMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLV 437

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G    G  D A   ++    +G   +   Y  LI+++ +     DA+  LD M++ G  
Sbjct: 438 TGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFG 493

Query: 482 PASS 485
              S
Sbjct: 494 VVQS 497



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/484 (23%), Positives = 214/484 (44%), Gaps = 34/484 (7%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI+   K   +++++     M   G    V +Y A+   +    R   A+++  +M 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           +  + P   TY V++ G     +++ A+     M+ + +    VTYN++I+G  + ++  
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGLCKAERAS 132

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  L  EM      P + +YTT+I G+   +++DDALR+F+++ +   +P+ VTY+ L+
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC  G++ E   +   M++      +   +  L+   C+ G ++ A ++L+ M     
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLD------------- 377
             +   Y  L+  FCK    D A  LL+++  K +   ++   S +D             
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312

Query: 378 -----------MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSK 426
                          +YN ++   C   Q  +A  F  + M     + V+FN +IRG  K
Sbjct: 313 ILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPP-NVVSFNIMIRGLCK 371

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED-GHSPASS 485
                 A E+V+   RR    D   Y  +I+   R+ +  +A      M+E+ G  P S 
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            + +++  L   G +  A    +  +EKG   N+     +++A       E+A   +D M
Sbjct: 432 TYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487

Query: 546 MQSG 549
           +Q G
Sbjct: 488 VQRG 491


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 147/621 (23%), Positives = 276/621 (44%), Gaps = 80/621 (12%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L      + A + +  +  AG+   D  TH   I+     G+ + A  +L  +
Sbjct: 13  YNAIMDALVNTAYHDQAHKVYVRMLSAGV-APDARTHTVRIKSFCITGRPHVALRLLRSL 71

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           P++G       +  ++      G   ++  +FD M +  V   V +++ +   + ++G  
Sbjct: 72  PERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDI 131

Query: 143 MMAKRYFNKMLSEG----------------------------------IEPTRHTYNVML 168
           M +     K+L  G                                  I P   TYN ++
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLM 191

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G     K++ A ++   M ++G   D  TYNT+I+GY +   + EA +L  +   K   
Sbjct: 192 RGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFV 251

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P  ++Y ++I G  A    + AL +F+E ++ D+KP+ V Y +L+ GLC  G ++   +V
Sbjct: 252 PDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 311

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK-AMIRLSIPTEAGHYGILIENF 347
           + EMVE    P D   +  ++   CK G+++ AA V+  A+++  +P +   +  +I+ +
Sbjct: 312 MNEMVEDGCHP-DIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLP-DVFTFNTMIDGY 369

Query: 348 CKAEMYDRAIKLLDKL------------------------------VEKEIIL---RPQS 374
           CK    D A++L++++                                +E+IL   RP  
Sbjct: 370 CKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN- 428

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
                A +YN +I++ C   Q  +A     ++ + G++ D ++FN LI G  + G+ D A
Sbjct: 429 -----AITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGA 483

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           + + + +  +G    AD +  LI +Y  K     A+     MI  G+ P    +R +++ 
Sbjct: 484 YLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDG 543

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             +   V  A   +  MV KG   ++    ++L +L M   V EA+  I +M++ G VP 
Sbjct: 544 SCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP- 602

Query: 554 FDSLLSVLSEKGKTIAAVKLL 574
            + + ++LS   K IAA K+L
Sbjct: 603 -EVVDTILSTDKKEIAAPKIL 622



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 126/599 (21%), Positives = 241/599 (40%), Gaps = 69/599 (11%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M   G   +  +Y+A+   ++    +  A + + +MLS G+ P   T+ V +  F ++ +
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A+R    +  RG  +  + Y T++ G        +A  LF EM  +++ P V ++  
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 237 M-----------------------------------IKGYVAVERADDALRIFDEMKSFD 261
           +                                   I+G     R ++A+ + + M ++ 
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P+ VTY  L+ GLC   K+ E  + LR M+ +   P D+  +  ++   CK   L  A
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIP-DDFTYNTIIDGYCKRDMLQEA 238

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK------------------- 362
            ++LK  I      +   Y  LI   C     +RA++L ++                   
Sbjct: 239 TELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKG 298

Query: 363 LVEKEIILRPQSTLD--------MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
           L  + +IL     ++         +  +YN +I  LC  G    A +     + KG L D
Sbjct: 299 LCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPD 358

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              FN +I G+ K    DSA ++V+ M   G+  DA  Y  ++    + G+  +     +
Sbjct: 359 VFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFE 418

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            MI  G  P +  +  ++E+  +  +++ AS V+  M + G+  +      ++      G
Sbjct: 419 EMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNG 478

Query: 534 HVEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            ++ A     ++D    S +   F+ L+   S K     A K+    + +    DL +Y 
Sbjct: 479 DLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYR 538

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
            ++D    A     AY  L +++ KG V    +  +++  L       +A  I+  M+R
Sbjct: 539 VLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVR 597



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 196/446 (43%), Gaps = 17/446 (3%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A Q+ R +   G    D  T+  +I+   +   L  A  +L D   KG   D   +  
Sbjct: 201 QEAAQYLRRMMNQGCIPDDF-TYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCS 259

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI     +G V+ ++++F+  +   ++  +  Y++L K + R+G  + A +  N+M+ +G
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P   TYN+++ G      +  A     D   +G   DV T+NTMI+GY +  K+D A 
Sbjct: 320 CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSAL 379

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +L   M    I P  I+Y +++ G     +A +    F+EM     +PNA+TY  L+   
Sbjct: 380 QLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 439

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   ++ E   V+  M +  + P D   F  L+   C++G L+ A  + + +        
Sbjct: 440 CKINQLEEASGVIVRMSQDGLVP-DTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 498

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
           A  + ILI  +        A K+  +++ K    +P      +  +Y  ++   C     
Sbjct: 499 ADTFNILIGAYSSKLNMQMAEKIFGEMISKG--YKP------DLYTYRVLVDGSCKAANV 550

Query: 397 GKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYIC 454
            +A +   +++ KG +  +A F  ++   +       A  I+ IM R G VP   D  + 
Sbjct: 551 DRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVDTIL- 609

Query: 455 LIESYLRKGEPADAKTALDSMIEDGH 480
                  K E A  K  ++ +++ GH
Sbjct: 610 ----STDKKEIAAPKILVEELMKKGH 631


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 227/457 (49%), Gaps = 47/457 (10%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I +L + GK++ A  +L +M  +G+  D  ++  LI+ + K G +Q + K+FD M
Sbjct: 47  TYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEM 106

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ++  +     +Y A+   + R G+ M A + FNKM S G+EP   TY  ++ G+  S ++
Sbjct: 107 EKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEM 166

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A      M   G++ +VVTY  + +G  +  ++D A +L  EM  K ++  + +Y ++
Sbjct: 167 EKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSL 226

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G         A+++ +EM+   + P+ +T+T L+   C  G+MV+  ++LREM++R +
Sbjct: 227 VNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGL 286

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P                                ++ T    + +L+  FC + M +   
Sbjct: 287 QP--------------------------------TVIT----FNVLMNGFCMSGMLEDGE 310

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC-HNGQTGKAEIFFRQLMKKGVL-DPV 415
           +LL  ++EK I+  P +T      +YN +++  C  N      EI ++ +  +GV+ D  
Sbjct: 311 RLLAWMLEKGIM--PNTT------TYNSLMKQYCIRNNMRCTTEI-YKGMCARGVMPDSN 361

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N LI+GH K  N   A+ + K M  +G    A +Y  +I+ + +K + ++A+   + M
Sbjct: 362 TYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEM 421

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +G +  + ++   ++  + +G ++TA  +    +E
Sbjct: 422 RREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 227/451 (50%), Gaps = 10/451 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  +I  Y   G +Q+ +K+   M+  G++ ++ +Y+++  L+ + G+   A+R   +M+
Sbjct: 13  YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           ++GI P    Y  ++ GF     ++ A + F++M+ + I  D + Y  +I G  R  KM 
Sbjct: 73  NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMM 132

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA+K+F +M  + +EP  ++YTT+I GY      + A  + ++M    + PN VTYTAL 
Sbjct: 133 EADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALA 192

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC  G++    ++L EM  + +   +   +  L+   CKSG++  A  +++ M    +
Sbjct: 193 DGLCKLGQVDTANELLHEMCGKGLQL-NICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   +  L++ +CK     +A +LL +++++   L+P         ++N ++   C +
Sbjct: 252 YPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG--LQPT------VITFNVLMNGFCMS 303

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G     E     +++KG++ +   +N+L++ +    N     EI K M  RGV  D++ Y
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY 363

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI+ + +     +A      M E G +  +S + S+++  F+  ++  A  + + M  
Sbjct: 364 NILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRR 423

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRID 543
           +G+  + ++    ++     G++E AL   D
Sbjct: 424 EGMAADAEIYNLFVDISYGEGNMETALELCD 454



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 176/395 (44%), Gaps = 45/395 (11%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G  P   +Y+ ++ G+ L  +L+  ++  ++M+ +G+  ++ TYN++I    +  K+D+A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           E++  EM  + I P  + YTT+I G+  +     A ++FDEM+   + P+ + YTA++ G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC  GKM+E  KV  +M  R + P D   +  L+   CKSG +  A  +   M++  +  
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEP-DEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  L +  CK    D A +LL ++  K         L +   +YN ++  LC +G 
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGK--------GLQLNICTYNSLVNGLCKSGN 235

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A     ++   G+  D + F  L+  + K G    A E+++ M  RG+      +  
Sbjct: 236 IRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV 295

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV--- 511
           L+  +   G   D +  L  M+E G  P ++ + S+M+       ++  + + K M    
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARG 355

Query: 512 --------------------------------EKG 514
                                           EKG
Sbjct: 356 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/395 (20%), Positives = 174/395 (44%), Gaps = 51/395 (12%)

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ V+Y+ ++ G C  G++ +V K+++EM  + + P   +                    
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYT-------------------- 47

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
                           Y  +I   CK+   D A ++L +++ + I+  P + +      Y
Sbjct: 48  ----------------YNSIILLLCKSGKVDDAERVLREMINQGIV--PDTVV------Y 83

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             +I   C  G    A   F ++ K+ ++ D +A+  +I G  + G    A ++   M  
Sbjct: 84  TTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFS 143

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           RGV  D   Y  LI+ Y + GE   A +  + M++ G +P    + ++ + L + G+V T
Sbjct: 144 RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDT 203

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A+ ++  M  KG++ N+     ++  L   G++ +A+  ++ M  +G  P+   F +L+ 
Sbjct: 204 ANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMD 263

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
              + G+ + A +LL   L R     + ++  +++    +G   +   +L  ++EKG + 
Sbjct: 264 AYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMP 323

Query: 620 DWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           +  + + L+       N +     + + +G  +RG
Sbjct: 324 NTTTYNSLMKQYCIRNNMR---CTTEIYKGMCARG 355



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 113/234 (48%), Gaps = 1/234 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L  + N   A++    +E AG++  D  T   +++   + G++  A  +L +M
Sbjct: 223 YNSLVNGLCKSGNIRQAVKLMEEMEVAGMY-PDTITFTTLMDAYCKTGEMVKAHELLREM 281

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+Q     F VL+  +   G++++  ++   M + G+  +  +Y++L K    R   
Sbjct: 282 LDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNM 341

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 +  M + G+ P  +TYN+++ G   +  ++ A    ++M  +G +L   +YN++
Sbjct: 342 RCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSI 401

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           I G+ + KK+ EA +LF EM+ + +      Y   +         + AL + DE
Sbjct: 402 IKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 6/220 (2%)

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  RG   D  +Y  +I  Y   GE       +  M   G  P    + S++  L + G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
           V  A RV++ M+ +G+  +  +   +++     G+++ A    D M +   VP+F +  +
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 560 V---LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           V   L   GK + A K+ +    R    D  +Y  ++D    +G+   A+S+  ++++ G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQ 656
              +  +   L  GL + G   Q D  + ++     +G Q
Sbjct: 181 LTPNVVTYTALADGLCKLG---QVDTANELLHEMCGKGLQ 217


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 228/520 (43%), Gaps = 18/520 (3%)

Query: 32  GAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE 91
           G  NS     F        L + +   HL+    L R G+L      L +M   G   D 
Sbjct: 81  GHSNSNGNGHFSSANSSFVLEDVESNNHLRQ---LVRTGELEEGFKFLENMVYHGNVPDI 137

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
                LI  + + G  +++ KI ++++  G    V +Y+ +     + G    A    ++
Sbjct: 138 IPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR 197

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M    + P   TYN +L     S KL+ A+   + M  R    DV+TY  +I    R   
Sbjct: 198 M---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           + +A KL  EM+++   P V++Y  ++ G     R D+A++  ++M S   +PN +T+  
Sbjct: 255 VGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           +L  +C  G+ ++ +K+L +M+ +   P     F  L+   C+ G L  A D+L+ M + 
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPS-VVTFNILINFLCRKGLLGRAIDILEKMPKH 373

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
                +  Y  L+  FCK +  DRAI+ L+++V +     P      +  +YN M+  LC
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY--P------DIVTYNTMLTALC 425

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
            +G+   A     QL  KG   PV   +N +I G +K G    A +++  M  + +  D 
Sbjct: 426 KDGKVEDAVEILNQLSSKGC-SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  L+    R+G+  +A          G  P +  F S+M  L +  +   A   +  
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVY 544

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           M+ +G K        ++E L   G  +EAL  ++ +   G
Sbjct: 545 MINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 225/507 (44%), Gaps = 42/507 (8%)

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
           E +E   H   ++  G     +LE   +F E+M   G   D++   T+I G+ R  K  +
Sbjct: 101 EDVESNNHLRQLVRTG-----ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRK 155

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A K+   ++     P VI+Y  MI GY      ++AL + D M    V P+ VTY  +L 
Sbjct: 156 AAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILR 212

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
            LCD+GK+ +  +VL  M++R   P D   +  L+   C+   +  A  +L  M      
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYP-DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCT 271

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKL---------VEKEIILRPQST----LDME-- 379
            +   Y +L+   CK    D AIK L+ +         +   IILR   +    +D E  
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331

Query: 380 ------------ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
                         ++N +I  LC  G  G+A     ++ K G   + +++N L+ G  K
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCK 391

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           E   D A E ++ M  RG   D   Y  ++ +  + G+  DA   L+ +   G SP    
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           + +V++ L + G+   A +++  M  K +K +    + ++  L   G V+EA+       
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
           + G  PN   F+S++  L +  +T  A+  L + + R C     SY  +++ L   G   
Sbjct: 512 RMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAK 571

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAG 630
            A  +L ++  KG +   +SS + +AG
Sbjct: 572 EALELLNELCNKGLMK--RSSAEQVAG 596



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 163/321 (50%), Gaps = 3/321 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  + + G+L+ A   L DMP  G Q +     +++ S    G   ++ K+ 
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M + G   SV +++ L   + R+G    A     KM   G +P   +YN +L GF   
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKE 392

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K++ AI + E M SRG   D+VTYNTM+    +  K+++A ++  ++  K   P +I+Y
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I G     +   A+++ DEM++ D+KP+ +TY++L+ GL   GK+ E  K   E   
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMY 353
             + P   +    +LG+ CK+   + A D L  MI R   PTE   Y ILIE      M 
Sbjct: 513 MGVRPNAVTFNSIMLGL-CKTRQTDRAIDFLVYMINRGCKPTET-SYTILIEGLAYEGMA 570

Query: 354 DRAIKLLDKLVEKEIILRPQS 374
             A++LL++L  K ++ R  +
Sbjct: 571 KEALELLNELCNKGLMKRSSA 591



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 204/459 (44%), Gaps = 17/459 (3%)

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           L+ V  N  +    R  +++E  K    M      P +I  TT+I+G+  + +   A +I
Sbjct: 100 LEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKI 159

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
            + ++     P+ +TY  ++ G C AG++     VL  M    + P D   +  +L   C
Sbjct: 160 LEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSP-DVVTYNTILRSLC 215

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
            SG L  A +VL  M++     +   Y ILIE  C+     +A+KLLD++ ++       
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDR------G 269

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI-RGHSKEGNPDS 432
            T D+   +YN ++  +C  G+  +A  F   +   G    V  +N+I R     G    
Sbjct: 270 CTPDV--VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A +++  M R+G       +  LI    RKG    A   L+ M + G  P S  +  ++ 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLH 387

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
              ++ ++  A   ++ MV +G   ++     +L AL   G VE+A+  ++ +   G  P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 553 ---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
               +++++  L++ GKT  A+KLLD    +D   D  +Y  ++  L   GK   A    
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            +    G   +  + + ++ GL +   T +A D L  MI
Sbjct: 508 HEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMI 546


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 220/487 (45%), Gaps = 11/487 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L +   ++ A  +L  M + G + +   +  LI  Y   G+  ESV++F
Sbjct: 279 DLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 338

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   GV  +V + ++    + + GR   AK  F+ M+ +G +P   +Y+ ML G+  +
Sbjct: 339 KQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATA 398

Query: 175 LK--LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               L      F  M ++GI+ +   +N +IN Y R   MD+A  +F +M+ K + P  +
Sbjct: 399 TDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTV 458

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           ++ T+I     + R DDAL  F+ M    V P+   Y  L+ G C+ G++V+ ++++ EM
Sbjct: 459 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 518

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           + + IPP     F  ++   CK G +    D++  M++         +  L+E +C    
Sbjct: 519 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 578

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            + A  LLD +    I + P   +      Y  ++   C NG+   A   FR ++ KGV 
Sbjct: 579 MEEAFALLDAMAS--IGIEPNCYI------YGTLVDGYCKNGRIDDALTVFRDMLHKGVK 630

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
              V ++ ++ G  +     +A ++   M   G       Y  ++    R     +A   
Sbjct: 631 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 690

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           L+ +           F  V+ ++F+ GR Q A  +  ++   G+  N+   + ++  L+ 
Sbjct: 691 LEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 750

Query: 532 RGHVEEA 538
               EEA
Sbjct: 751 EESYEEA 757



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 146/615 (23%), Positives = 277/615 (45%), Gaps = 20/615 (3%)

Query: 39  ALQFFRWVERAGLFNHDR---ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           A++ F+ ++R     H      T+  +I+   RV + +    I+  + K G+  D D   
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPD-DFSY 214

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI  + K G V ++  +F  M + GV   +   +++ K + +      A+    KM+  
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           GI P   TY++++ G   S  ++ A R  E M   G   + +TYN++I+GY+     +E+
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            ++F +M    + PTV +  + I       R ++A  IFD M     KP+ ++Y+ +L G
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 394

Query: 276 LCDAGK--MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
              A    + +V  +   M+ + I P +  VF  L+    + G ++ A  + + M    +
Sbjct: 395 YATATDSCLADVHNIFNLMLTKGIAP-NKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 453

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   +  +I + C+    D A+   + +V  +I + P   +      Y  +IQ  C++
Sbjct: 454 IPDTVTFATVISSLCRIGRLDDALHKFNHMV--DIGVPPSEAV------YGCLIQGCCNH 505

Query: 394 GQTGKAEIFFRQLMKKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           G+  KA+    ++M K +  P    F+++I    KEG      +I+ +M + G   +   
Sbjct: 506 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 565

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +  L+E Y   G   +A   LD+M   G  P   ++ ++++   ++GR+  A  V + M+
Sbjct: 566 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 625

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTI 568
            KGVK    L + IL  L        A      M++SG   S+  +  +L  L     T 
Sbjct: 626 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTD 685

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A  LL+     +   D+ ++  V+ A+   G+   A  +   I   G V + ++   +I
Sbjct: 686 EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 745

Query: 629 AGLNQEGNTKQADIL 643
             L +E + ++AD L
Sbjct: 746 TNLIKEESYEEADNL 760



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 92/186 (49%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VG +  A  +L  M   G++ +  ++  L++ Y K G + +++ +F  M   GV+ +   
Sbjct: 576 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 635

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  +   + +  R   AK+ F++M+  G   + HTY V+L G   +   + A    E + 
Sbjct: 636 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 695

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  +  D++T+N +I+   +  +  EA++LF  +    + P + +Y+ MI   +  E  +
Sbjct: 696 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 755

Query: 249 DALRIF 254
           +A  +F
Sbjct: 756 EADNLF 761


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 135/573 (23%), Positives = 248/573 (43%), Gaps = 83/573 (14%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL F + +   G +  D+ T+  +I  L + G++  A  +L +M K  VQ +  M+  LI
Sbjct: 144 ALDFCQNLLAQG-YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +   K G V +++ +   + + G+     +Y++L       GR+    +   KM+ E ++
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD 262

Query: 159 PTRHT-----------------------------------YNVMLWGFFLSLKLETAIRF 183
           P  +T                                   YN ++ G+     +  A   
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  M  RG+  DV+ YN +I+GY + K +DEA  LF E+  KN+ PT+ SY ++I G   
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             R     ++ DEM      P+ VTY  L+  LC  G+++E   VL  M+++ + P +  
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP-NIV 441

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  ++   C   ++N A D+   M++  +  +  +Y +LI  +CK EM D AI L  ++
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRG 423
             K +I         + +SYN +I  LC+ G+    +                       
Sbjct: 502 RHKNLI--------PDIASYNSLIDGLCNLGRIPHVQ----------------------- 530

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
                      E++  M   G   D   Y  L++++  K +P D   +L   I +G  P 
Sbjct: 531 -----------ELLDEMCDSGQSPDVITYNILLDAFC-KTQPFDKAISLFRQIVEGIWPD 578

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
                +++++L +  +++ A   +K ++  G   N+     ++ AL   G   EA+  + 
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            M  +   P+   F+ ++ VL ++ +T  A KL
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/553 (22%), Positives = 252/553 (45%), Gaps = 14/553 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F+ L+ +  + G    ++ +F  ++  G+  S+ ++  L      +     A      +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L  G +P   T+N ++ GF ++  +  A+ F +++ ++G   D  TY T+ING ++  ++
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
             A  L  EM++ +++P ++ Y+ +I G        DAL +  ++    +  +AVTY +L
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G+  EV ++L +MV   + P D+  F  L+   CK G +  A  VL  M +  
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVRENVDP-DDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              +   Y  L+E +C  E    A +L +++V++         L+ +  +YN +I   C 
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKR--------GLEPDVLNYNVLIDGYCK 347

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                +A + F++L  K ++  +A +N+LI G    G      +++  M     P D   
Sbjct: 348 TKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT 407

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI++  ++G   +A   L  M++ G  P    + ++M+       V  A  +   MV
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           + G++ ++     ++        V+EA+     M     +P+   ++SL+  L   G+  
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIP 527

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
              +LLD         D+ +Y  +LDA         A S+  +I+E G   D+ ++  ++
Sbjct: 528 HVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIV 586

Query: 629 AGLNQEGNTKQAD 641
             L +    K A+
Sbjct: 587 DNLCKGEKLKMAE 599



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 248/552 (44%), Gaps = 27/552 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           V ++V  F+ M ++        +D L   I+R G Y  A   F ++ S+GI P+  T+ +
Sbjct: 36  VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN----RFKKMDEAEKLFAEM 222
           ++  +F       A      +   G   ++VT+NT+ING+      FK +D  + L A+ 
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
              +      +Y T+I G     +   AL +  EM+   V+PN V Y+AL+ GLC  G +
Sbjct: 156 YLFD----QFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            +   +  ++ ER I   D   +  L+   C  G       +L  M+R ++  +   + I
Sbjct: 212 SDALGLCSQIGERGI-LLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 343 LIENFCKAEMYDRA---IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           LI+  CK      A   + ++ K  EK  I+           +YN +++  C      +A
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIV-----------TYNALMEGYCSRENVHEA 319

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
              F +++K+G+  D + +N LI G+ K    D A  + K +  + +     +Y  LI+ 
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
               G  +  K  LD M      P    +  ++++L ++GR+  A  V+  M++KGVK N
Sbjct: 380 LCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLD 575
           +     +++   +R +V  A    + M++SG  P   N++ L++   +      A+ L  
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFK 499

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
               ++ I D+ASY  ++D L   G+  +   +L ++ + G   D  + + L+    +  
Sbjct: 500 EMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQ 559

Query: 636 NTKQADILSRMI 647
              +A  L R I
Sbjct: 560 PFDKAISLFRQI 571



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 192/410 (46%), Gaps = 46/410 (11%)

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            ++ AR +   M K+G++ D   + VLI+ Y K  +V E++ +F  +    +  ++ SY+
Sbjct: 315 NVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYN 374

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
           +L   +   GR    K+  ++M      P   TYN+++       ++  A+     M  +
Sbjct: 375 SLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKK 434

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G+  ++VTYN M++GY     ++ A+ +F  M +  +EP +++Y  +I GY   E  D+A
Sbjct: 435 GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA 494

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           + +F EM+  ++ P+  +Y +L+ GLC+ G++  VQ++L EM                  
Sbjct: 495 IVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM------------------ 536

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             C SG    + DV+              Y IL++ FCK + +D+AI L  ++VE    +
Sbjct: 537 --CDSGQ---SPDVIT-------------YNILLDAFCKTQPFDKAISLFRQIVEG---I 575

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGN 429
            P      +  + + ++ +LC   +   AE   + L+  G    V  +  LI    K+G+
Sbjct: 576 WP------DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
              A  ++  M     P DA  +  +I   L++ E   A+   + MI  G
Sbjct: 630 FGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 131/582 (22%), Positives = 246/582 (42%), Gaps = 19/582 (3%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  + K G Q +   F  +I  +   G++ +++     +   G      +Y  L   + 
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G+   A     +M    ++P    Y+ ++ G      +  A+     +  RGI LD V
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN++I+G     +  E  +L  +M  +N++P   ++  +I       R  +A  +   M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
                KP+ VTY AL+ G C    + E +++   MV+R + P D   +  L+   CK+  
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP-DVLNYNVLIDGYCKTKM 350

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           ++ A  + K +   ++      Y  LI+  C +       KLLD++          S   
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM--------HGSAQP 402

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
            +  +YN +I  LC  G+  +A      +MKKGV  + V +N ++ G+    N + A +I
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M + G+  D   Y  LI  Y +     +A      M      P  + + S+++ L  
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF-- 554
            GR+     ++  M + G   ++     +L+A       ++A+     +++ G  P+F  
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYT 581

Query: 555 -DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
             +++  L +  K   A   L   L   C  ++ +Y  +++AL   G    A  +L K+ 
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEM-SRG 654
           +     D  + + +I  L Q   T +A+ L    R EM +RG
Sbjct: 642 DNDRPPDAITFEIIIGVLLQRNETDKAEKL----REEMIARG 679



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/446 (22%), Positives = 192/446 (43%), Gaps = 14/446 (3%)

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           RF+ +D+A   F  M      P    +  ++   V +     A+ +F +++S  + P+  
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           T+T L+              +L  +++    P +   F  ++   C +G +  A D  + 
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQP-NLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           ++      +   YG LI    K      A+ LL ++ +  +    Q  L M    Y+ +I
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSV----QPNLVM----YSALI 202

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             LC +G    A     Q+ ++G+ LD V +N+LI G    G      +++  M R  V 
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD 262

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D   +  LI++  ++G   +A+  L  M + G  P    + ++ME       V  A  +
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSE 563
              MV++G++ ++     +++       V+EA+     +     VP   +++SL+  L  
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+     KLLD   G     D+ +Y  ++DAL   G+ L A  +L  +M+KG   +  +
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442

Query: 624 SDKLIAGLNQEGNTKQA-DILSRMIR 648
            + ++ G     N   A DI +RM++
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVK 468


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 237/496 (47%), Gaps = 6/496 (1%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L R G++  A  +L  M + G+Q  +  +  +++   KKG    ++ +   M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 118 KQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           +++  +  +V  Y A+   + + GR+  A+  F +M  +GI P   TYN M+ GF  S +
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A +  ++M  R IS DVVTYN +IN + +  K  EAE+L+ EM  + I P  I+Y++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI G+    R D A  +F  M +    PN +T+  L+ G C A ++ +  ++L EM E  
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +   D + +  L+      G LNAA D+L+ MI   +  +      L++  C       A
Sbjct: 426 L-VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484

Query: 357 IKLLDKLVEKEIIL---RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           +++   + + +  L    P + ++ +  +YN +I  L + G+  +AE  + ++  +G++ 
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D + ++++I G  K+   D A ++   MG +    +   +  LI  Y + G   D     
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M   G    +  + +++    + G +  A  + + M+  GV  +   +  +L  L  +
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664

Query: 533 GHVEEALGRIDLMMQS 548
             ++ A+  ++ +  S
Sbjct: 665 EELKRAVAMLEKLQMS 680



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 242/554 (43%), Gaps = 26/554 (4%)

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           + ++  M++  +   + S+  L K      +   A   F K+   G+ P   T+N +L G
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHG 158

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
             +  ++  A+  F  M       +VVT+ T++NG  R  ++ EA  L   M E  ++PT
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            I+Y T++ G         AL +  +M+    + PN V Y+A++  LC  G+  + Q + 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            EM E+ I P D   +  ++   C SG  + A  +L+ M+   I  +   Y  LI  F K
Sbjct: 279 TEMQEKGIFP-DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
              +  A +L D+++ + II  P +       +Y+ MI   C   +   AE  F  +  K
Sbjct: 338 EGKFFEAEELYDEMLPRGII--PNTI------TYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G   + + FN LI G+      D   E++  M   G+  D   Y  LI  +   G+   A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE-----------KGVKE 517
              L  MI  G  P      ++++ L ++G+++ A  + K M +            GV+ 
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           ++     ++  L+  G   EA    + M   G VP+   + S++  L ++ +   A ++ 
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           D    +    ++ ++  +++    AG+  +   +  ++  +G V +  +   LI G  + 
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629

Query: 635 GNTKQA-DILSRMI 647
           GN   A DI   MI
Sbjct: 630 GNINGALDIFQEMI 643



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 221/493 (44%), Gaps = 36/493 (7%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q  +  + + +    ++  AL   R +E       +   +  +I+ L + G+ + A+ + 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M +KG+  D   +  +I  +   G   ++ ++   M +  +   V +Y+AL    ++ 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G++  A+  +++ML  GI P   TY+ M+ GF    +L+ A   F  M ++G S +++T+
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+I+GY   K++D+  +L  EM E  +     +Y T+I G+  V   + AL +  EM S
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+ VT   LL GLCD GK+ +  ++ + M +     KD        GV+       
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS---KKDLDASHPFNGVE------- 508

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
                           +   Y ILI        +  A +L +++  + I+  P +     
Sbjct: 509 ---------------PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV--PDTI---- 547

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIV 437
             +Y+ MI  LC   +  +A   F  +  K    P  V F  LI G+ K G  D   E+ 
Sbjct: 548 --TYSSMIDGLCKQSRLDEATQMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             MGRRG+  +A  YI LI  + + G    A      MI  G  P +   R+++  L+  
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664

Query: 498 GRVQTASRVMKSM 510
             ++ A  +++ +
Sbjct: 665 EELKRAVAMLEKL 677



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/546 (21%), Positives = 248/546 (45%), Gaps = 27/546 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           +++++ +F  M +     SV  +  L  +++R  R  +    + KM  + I    +++ +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    KL  A+  F  +   G+  DVVT+NT+++G     ++ EA  LF +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             P V+++TT++ G     R  +A+ + D M    ++P  +TY  ++ G+C  G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 287 KVLREM--VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +LR+M  V   IP  +  ++  ++   CK G  + A ++   M    I  +   Y  +I
Sbjct: 240 NLLRKMEEVSHIIP--NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             FC +  +  A +LL +++E++I   P      +  +YN +I      G+  +AE  + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKI--SP------DVVTYNALINAFVKEGKFFEAEELYD 349

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++ +G++ + + ++++I G  K+   D+A  +  +M  +G   +   +  LI+ Y    
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              D    L  M E G    ++ + +++   +  G +  A  +++ M+  G+  ++    
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 524 KILEALLMRGHVEEALGRIDLMMQS--------------GSVPNFDSLLSVLSEKGKTIA 569
            +L+ L   G +++AL    +M +S                V  ++ L+S L  +GK + 
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A +L +    R  + D  +Y  ++D L    +   A  +   +  K    +  +   LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 630 GLNQEG 635
           G  + G
Sbjct: 590 GYCKAG 595



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 225/491 (45%), Gaps = 27/491 (5%)

Query: 170 GFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
           GF     LE AI  F DM +SR +   VV +  ++    R ++ D    L+ +M+ K I 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLP-SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
             + S+T +IK + +  +   AL  F ++    + P+ VT+  LL GLC   ++ E   +
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             +M E    P +   F  L+   C+ G +  A  +L  M+   +      YG +++  C
Sbjct: 172 FHQMFETTCRP-NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A+ LL K+ E   I+ P   +      Y+ +I  LC +G+   A+  F ++ +
Sbjct: 231 KKGDTVSALNLLRKMEEVSHII-PNVVI------YSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KG+  D   +N++I G    G    A ++++ M  R +  D   Y  LI +++++G+  +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+   D M+  G  P +  + S+++   +  R+  A  +   M  KG   NL     +++
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                  +++ +  +  M ++G V +   +++L+      G   AA+ LL   +      
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEK------------GGVTDWKSSDKLIAGLN 632
           D+ + + +LD L   GK  +A   +FK+M+K            G   D ++ + LI+GL 
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 633 QEGNTKQADIL 643
            EG   +A+ L
Sbjct: 523 NEGKFLEAEEL 533



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 116/529 (21%), Positives = 221/529 (41%), Gaps = 57/529 (10%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M +K ++ D   F +LI+ +     +  ++  F  + +LG+   V +++ L   +    R
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F++M      P   T+  ++ G     ++  A+   + M   G+    +TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 202 MING----------YNRFKKMDE--------------------------AEKLFAEMKEK 225
           +++G           N  +KM+E                          A+ LF EM+EK
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I P + +Y +MI G+ +  R  DA ++  EM    + P+ VTY AL+      GK  E 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           +++  EM+ R I P +   +  ++   CK   L+AA  +   M           +  LI+
Sbjct: 345 EELYDEMLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
            +C A+  D  ++LL ++ E  ++         + ++YN +I      G    A    ++
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLV--------ADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-----------RGVPRDADAYI 453
           ++  G+  D V  + L+ G    G    A E+ K+M +            GV  D   Y 
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI   + +G+  +A+   + M   G  P +  + S+++ L +  R+  A+++  SM  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
               N+     ++      G V++ L     M + G V N  + ++++ 
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 220/487 (45%), Gaps = 11/487 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L +   ++ A  +L  M + G + +   +  LI  Y   G+  ESV++F
Sbjct: 117 DLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 176

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   GV  +V + ++    + + GR   AK  F+ M+ +G +P   +Y+ ML G+  +
Sbjct: 177 KQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATA 236

Query: 175 LK--LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               L      F  M ++GI+ +   +N +IN Y R   MD+A  +F +M+ K + P  +
Sbjct: 237 TDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTV 296

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           ++ T+I     + R DDAL  F+ M    V P+   Y  L+ G C+ G++V+ ++++ EM
Sbjct: 297 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 356

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           + + IPP     F  ++   CK G +    D++  M++         +  L+E +C    
Sbjct: 357 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 416

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            + A  LLD +    I + P   +      Y  ++   C NG+   A   FR ++ KGV 
Sbjct: 417 MEEAFALLDAMA--SIGIEPNCYI------YGTLVDGYCKNGRIDDALTVFRDMLHKGVK 468

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
              V ++ ++ G  +     +A ++   M   G       Y  ++    R     +A   
Sbjct: 469 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 528

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           L+ +           F  V+ ++F+ GR Q A  +  ++   G+  N+   + ++  L+ 
Sbjct: 529 LEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 588

Query: 532 RGHVEEA 538
               EEA
Sbjct: 589 EESYEEA 595



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 142/594 (23%), Positives = 268/594 (45%), Gaps = 17/594 (2%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
            T+  +I+   RV + +    I+  + K G+  D D    LI  + K G V ++  +F  
Sbjct: 15  HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPD-DFSYSLIYGFVKDGEVDKAHCLFLE 73

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M + GV   +   +++ K + +      A+    KM+  GI P   TY++++ G   S  
Sbjct: 74  MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKA 133

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           ++ A R  E M   G   + +TYN++I+GY+     +E+ ++F +M    + PTV +  +
Sbjct: 134 MDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNS 193

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA--GKMVEVQKVLREMVE 294
            I       R ++A  IFD M     KP+ ++Y+ +L G   A    + +V  +   M+ 
Sbjct: 194 FIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLT 253

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + I P +  VF  L+    + G ++ A  + + M    +  +   +  +I + C+    D
Sbjct: 254 KGIAP-NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 312

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A+   + +V  +I + P   +      Y  +IQ  C++G+  KA+    ++M K +  P
Sbjct: 313 DALHKFNHMV--DIGVPPSEAV------YGCLIQGCCNHGELVKAKELISEMMNKDIPPP 364

Query: 415 VA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
               F+++I    KEG      +I+ +M + G   +   +  L+E Y   G   +A   L
Sbjct: 365 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALL 424

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D+M   G  P   ++ ++++   ++GR+  A  V + M+ KGVK    L + IL  L   
Sbjct: 425 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 484

Query: 533 GHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
                A      M++SG   S+  +  +L  L     T  A  LL+     +   D+ ++
Sbjct: 485 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITF 544

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
             V+ A+   G+   A  +   I   G V + ++   +I  L +E + ++AD L
Sbjct: 545 NIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNL 598



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 124/532 (23%), Positives = 227/532 (42%), Gaps = 62/532 (11%)

Query: 159 PTRHTYNV----------------------------------MLWGFFLSLKLETAIRFF 184
           PT HTYN+                                  +++GF    +++ A   F
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLF 71

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M  +G+   ++  N++I    + K+MD+AE +  +M +  I P + +Y+ +I G    
Sbjct: 72  LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 131

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDN- 302
           +  D A R+ ++M     +PN++TY +L+ G   +G   E  +V ++M     IP  DN 
Sbjct: 132 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 191

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF------CKAEMYDRA 356
           + F+  L    K G  N A  +  +M+      +   Y  ++  +      C A++++  
Sbjct: 192 NSFIHALF---KHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN-- 246

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
             + + ++ K I   P   +      +N +I      G   KA + F  +  KG++ D V
Sbjct: 247 --IFNLMLTKGI--APNKHV------FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTV 296

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            F  +I    + G  D A      M   GVP     Y CLI+     GE   AK  +  M
Sbjct: 297 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 356

Query: 476 I-EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           + +D   P    F S++ +L ++GRV     +M  MV+ G + N+     ++E   + G+
Sbjct: 357 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 416

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +EEA   +D M   G  PN   + +L+    + G+   A+ +    L +        Y  
Sbjct: 417 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 476

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           +L  L  A +T  A  +  +++E G      +   ++ GL +   T +A++L
Sbjct: 477 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 528



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 92/186 (49%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VG +  A  +L  M   G++ +  ++  L++ Y K G + +++ +F  M   GV+ +   
Sbjct: 414 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 473

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  +   + +  R   AK+ F++M+  G   + HTY V+L G   +   + A    E + 
Sbjct: 474 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 533

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  +  D++T+N +I+   +  +  EA++LF  +    + P + +Y+ MI   +  E  +
Sbjct: 534 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 593

Query: 249 DALRIF 254
           +A  +F
Sbjct: 594 EADNLF 599


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 237/496 (47%), Gaps = 6/496 (1%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L R G++  A  +L  M + G+Q  +  +  +++   KKG    ++ +   M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 118 KQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           +++  +  +V  Y A+   + + GR+  A+  F +M  +GI P   TYN M+ GF  S +
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A +  ++M  R IS DVVTYN +IN + +  K  EAE+L+ EM  + I P  I+Y++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI G+    R D A  +F  M +    PN +T+  L+ G C A ++ +  ++L EM E  
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +   D + +  L+      G LNAA D+L+ MI   +  +      L++  C       A
Sbjct: 426 L-VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484

Query: 357 IKLLDKLVEKEIIL---RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           +++   + + +  L    P + ++ +  +YN +I  L + G+  +AE  + ++  +G++ 
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D + ++++I G  K+   D A ++   MG +    +   +  LI  Y + G   D     
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M   G    +  + +++    + G +  A  + + M+  GV  +   +  +L  L  +
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664

Query: 533 GHVEEALGRIDLMMQS 548
             ++ A+  ++ +  S
Sbjct: 665 EELKRAVAMLEKLQMS 680



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 242/554 (43%), Gaps = 26/554 (4%)

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           + ++  M++  +   + S+  L K      +   A   F K+   G+ P   T+N +L G
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHG 158

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
             +  ++  A+  F  M       +VVT+ T++NG  R  ++ EA  L   M E  ++PT
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            I+Y T++ G         AL +  +M+    + PN V Y+A++  LC  G+  + Q + 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            EM E+ I P D   +  ++   C SG  + A  +L+ M+   I  +   Y  LI  F K
Sbjct: 279 TEMQEKGIFP-DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
              +  A +L D+++ + II  P +       +Y+ MI   C   +   AE  F  +  K
Sbjct: 338 EGKFFEAEELYDEMLPRGII--PNTI------TYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G   + + FN LI G+      D   E++  M   G+  D   Y  LI  +   G+   A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE-----------KGVKE 517
              L  MI  G  P      ++++ L ++G+++ A  + K M +            GV+ 
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           ++     ++  L+  G   EA    + M   G VP+   + S++  L ++ +   A ++ 
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           D    +    ++ ++  +++    AG+  +   +  ++  +G V +  +   LI G  + 
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629

Query: 635 GNTKQA-DILSRMI 647
           GN   A DI   MI
Sbjct: 630 GNINGALDIFQEMI 643



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 221/493 (44%), Gaps = 36/493 (7%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q  +  + + +    ++  AL   R +E       +   +  +I+ L + G+ + A+ + 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M +KG+  D   +  +I  +   G   ++ ++   M +  +   V +Y+AL    ++ 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G++  A+  +++ML  GI P   TY+ M+ GF    +L+ A   F  M ++G S +++T+
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+I+GY   K++D+  +L  EM E  +     +Y T+I G+  V   + AL +  EM S
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+ VT   LL GLCD GK+ +  ++ + M +     KD        GV+       
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS---KKDLDASHPFNGVE------- 508

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
                           +   Y ILI        +  A +L +++  + I+  P +     
Sbjct: 509 ---------------PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV--PDTI---- 547

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIV 437
             +Y+ MI  LC   +  +A   F  +  K    P  V F  LI G+ K G  D   E+ 
Sbjct: 548 --TYSSMIDGLCKQSRLDEATQMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             MGRRG+  +A  YI LI  + + G    A      MI  G  P +   R+++  L+  
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664

Query: 498 GRVQTASRVMKSM 510
             ++ A  +++ +
Sbjct: 665 EELKRAVAMLEKL 677



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/546 (21%), Positives = 248/546 (45%), Gaps = 27/546 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           +++++ +F  M +     SV  +  L  +++R  R  +    + KM  + I    +++ +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    KL  A+  F  +   G+  DVVT+NT+++G     ++ EA  LF +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             P V+++TT++ G     R  +A+ + D M    ++P  +TY  ++ G+C  G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 287 KVLREM--VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +LR+M  V   IP  +  ++  ++   CK G  + A ++   M    I  +   Y  +I
Sbjct: 240 NLLRKMEEVSHIIP--NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             FC +  +  A +LL +++E++I   P      +  +YN +I      G+  +AE  + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKI--SP------DVVTYNALINAFVKEGKFFEAEELYD 349

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++ +G++ + + ++++I G  K+   D+A  +  +M  +G   +   +  LI+ Y    
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              D    L  M E G    ++ + +++   +  G +  A  +++ M+  G+  ++    
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 524 KILEALLMRGHVEEALGRIDLMMQS--------------GSVPNFDSLLSVLSEKGKTIA 569
            +L+ L   G +++AL    +M +S                V  ++ L+S L  +GK + 
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A +L +    R  + D  +Y  ++D L    +   A  +   +  K    +  +   LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 630 GLNQEG 635
           G  + G
Sbjct: 590 GYCKAG 595



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 225/491 (45%), Gaps = 27/491 (5%)

Query: 170 GFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
           GF     LE AI  F DM +SR +   VV +  ++    R ++ D    L+ +M+ K I 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLP-SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
             + S+T +IK + +  +   AL  F ++    + P+ VT+  LL GLC   ++ E   +
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             +M E    P +   F  L+   C+ G +  A  +L  M+   +      YG +++  C
Sbjct: 172 FHQMFETTCRP-NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A+ LL K+ E   I+ P   +      Y+ +I  LC +G+   A+  F ++ +
Sbjct: 231 KKGDTVSALNLLRKMEEVSHII-PNVVI------YSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KG+  D   +N++I G    G    A ++++ M  R +  D   Y  LI +++++G+  +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+   D M+  G  P +  + S+++   +  R+  A  +   M  KG   NL     +++
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                  +++ +  +  M ++G V +   +++L+      G   AA+ LL   +      
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEK------------GGVTDWKSSDKLIAGLN 632
           D+ + + +LD L   GK  +A   +FK+M+K            G   D ++ + LI+GL 
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 633 QEGNTKQADIL 643
            EG   +A+ L
Sbjct: 523 NEGKFLEAEEL 533



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 116/529 (21%), Positives = 221/529 (41%), Gaps = 57/529 (10%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M +K ++ D   F +LI+ +     +  ++  F  + +LG+   V +++ L   +    R
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F++M      P   T+  ++ G     ++  A+   + M   G+    +TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 202 MING----------YNRFKKMDE--------------------------AEKLFAEMKEK 225
           +++G           N  +KM+E                          A+ LF EM+EK
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I P + +Y +MI G+ +  R  DA ++  EM    + P+ VTY AL+      GK  E 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           +++  EM+ R I P +   +  ++   CK   L+AA  +   M           +  LI+
Sbjct: 345 EELYDEMLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
            +C A+  D  ++LL ++ E  ++         + ++YN +I      G    A    ++
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLV--------ADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-----------RGVPRDADAYI 453
           ++  G+  D V  + L+ G    G    A E+ K+M +            GV  D   Y 
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI   + +G+  +A+   + M   G  P +  + S+++ L +  R+  A+++  SM  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
               N+     ++      G V++ L     M + G V N  + ++++ 
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 220/487 (45%), Gaps = 11/487 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L +   ++ A  +L  M + G + +   +  LI  Y   G+  ESV++F
Sbjct: 203 DLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 262

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   GV  +V + ++    + + GR   AK  F+ M+ +G +P   +Y+ ML G+  +
Sbjct: 263 KQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATA 322

Query: 175 LK--LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               L      F  M ++GI+ +   +N +IN Y R   MD+A  +F +M+ K + P  +
Sbjct: 323 TDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTV 382

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           ++ T+I     + R DDAL  F+ M    V P+   Y  L+ G C+ G++V+ ++++ EM
Sbjct: 383 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 442

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           + + IPP     F  ++   CK G +    D++  M++         +  L+E +C    
Sbjct: 443 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 502

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            + A  LLD +    I + P   +      Y  ++   C NG+   A   FR ++ KGV 
Sbjct: 503 MEEAFALLDAMA--SIGIEPNCYI------YGTLVDGYCKNGRIDDALTVFRDMLHKGVK 554

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
              V ++ ++ G  +     +A ++   M   G       Y  ++    R     +A   
Sbjct: 555 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 614

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           L+ +           F  V+ ++F+ GR Q A  +  ++   G+  N+   + ++  L+ 
Sbjct: 615 LEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 674

Query: 532 RGHVEEA 538
               EEA
Sbjct: 675 EESYEEA 681



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 142/594 (23%), Positives = 268/594 (45%), Gaps = 17/594 (2%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
            T+  +I+   RV + +    I+  + K G+  D D    LI  + K G V ++  +F  
Sbjct: 101 HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPD-DFSYSLIYGFVKDGEVDKAHCLFLE 159

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M + GV   +   +++ K + +      A+    KM+  GI P   TY++++ G   S  
Sbjct: 160 MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKA 219

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           ++ A R  E M   G   + +TYN++I+GY+     +E+ ++F +M    + PTV +  +
Sbjct: 220 MDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNS 279

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK--MVEVQKVLREMVE 294
            I       R ++A  IFD M     KP+ ++Y+ +L G   A    + +V  +   M+ 
Sbjct: 280 FIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLT 339

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + I P +  VF  L+    + G ++ A  + + M    +  +   +  +I + C+    D
Sbjct: 340 KGIAP-NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 398

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A+   + +V  +I + P   +      Y  +IQ  C++G+  KA+    ++M K +  P
Sbjct: 399 DALHKFNHMV--DIGVPPSEAV------YGCLIQGCCNHGELVKAKELISEMMNKDIPPP 450

Query: 415 VA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
               F+++I    KEG      +I+ +M + G   +   +  L+E Y   G   +A   L
Sbjct: 451 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALL 510

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D+M   G  P   ++ ++++   ++GR+  A  V + M+ KGVK    L + IL  L   
Sbjct: 511 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 570

Query: 533 GHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
                A      M++SG   S+  +  +L  L     T  A  LL+     +   D+ ++
Sbjct: 571 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITF 630

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
             V+ A+   G+   A  +   I   G V + ++   +I  L +E + ++AD L
Sbjct: 631 NIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNL 684



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 124/532 (23%), Positives = 227/532 (42%), Gaps = 62/532 (11%)

Query: 159 PTRHTYNV----------------------------------MLWGFFLSLKLETAIRFF 184
           PT HTYN+                                  +++GF    +++ A   F
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLF 157

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M  +G+   ++  N++I    + K+MD+AE +  +M +  I P + +Y+ +I G    
Sbjct: 158 LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 217

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDN- 302
           +  D A R+ ++M     +PN++TY +L+ G   +G   E  +V ++M     IP  DN 
Sbjct: 218 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 277

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF------CKAEMYDRA 356
           + F+  L    K G  N A  +  +M+      +   Y  ++  +      C A++++  
Sbjct: 278 NSFIHAL---FKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN-- 332

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
             + + ++ K I   P   +      +N +I      G   KA + F  +  KG++ D V
Sbjct: 333 --IFNLMLTKGI--APNKHV------FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTV 382

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            F  +I    + G  D A      M   GVP     Y CLI+     GE   AK  +  M
Sbjct: 383 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 442

Query: 476 I-EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           + +D   P    F S++ +L ++GRV     +M  MV+ G + N+     ++E   + G+
Sbjct: 443 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 502

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +EEA   +D M   G  PN   + +L+    + G+   A+ +    L +        Y  
Sbjct: 503 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 562

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           +L  L  A +T  A  +  +++E G      +   ++ GL +   T +A++L
Sbjct: 563 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 614



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 92/186 (49%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VG +  A  +L  M   G++ +  ++  L++ Y K G + +++ +F  M   GV+ +   
Sbjct: 500 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 559

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  +   + +  R   AK+ F++M+  G   + HTY V+L G   +   + A    E + 
Sbjct: 560 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 619

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  +  D++T+N +I+   +  +  EA++LF  +    + P + +Y+ MI   +  E  +
Sbjct: 620 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 679

Query: 249 DALRIF 254
           +A  +F
Sbjct: 680 EADNLF 685


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 237/496 (47%), Gaps = 6/496 (1%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L R G++  A  +L  M + G+Q  +  +  +++   KKG    ++ +   M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 118 KQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           +++  +  +V  Y A+   + + GR+  A+  F +M  +GI P   TYN M+ GF  S +
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A +  ++M  R IS DVVTYN +IN + +  K  EAE+L+ EM  + I P  I+Y++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI G+    R D A  +F  M +    PN +T+  L+ G C A ++ +  ++L EM E  
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +   D + +  L+      G LNAA D+L+ MI   +  +      L++  C       A
Sbjct: 426 L-VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484

Query: 357 IKLLDKLVEKEIIL---RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           +++   + + +  L    P + ++ +  +YN +I  L + G+  +AE  + ++  +G++ 
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D + ++++I G  K+   D A ++   MG +    +   +  LI  Y + G   D     
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M   G    +  + +++    + G +  A  + + M+  GV  +   +  +L  L  +
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664

Query: 533 GHVEEALGRIDLMMQS 548
             ++ A+  ++ +  S
Sbjct: 665 EELKRAVAMLEKLQMS 680



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 131/554 (23%), Positives = 242/554 (43%), Gaps = 26/554 (4%)

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           + ++  M++  +   + S++ L K      +   A   F K+   G+ P   T+  +L G
Sbjct: 99  ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHG 158

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
             +  ++  A+  F  M       +VVT+ T++NG  R  ++ EA  L   M E  ++PT
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            I+Y T++ G         AL +  +M+    + PN V Y+A++  LC  G+  + Q + 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            EM E+ I P D   +  ++   C SG  + A  +L+ M+   I  +   Y  LI  F K
Sbjct: 279 TEMQEKGIFP-DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
              +  A +L D+++ + II  P +       +Y+ MI   C   +   AE  F  +  K
Sbjct: 338 EGKFFEAEELYDEMLPRGII--PNTI------TYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G   + + FN LI G+      D   E++  M   G+  D   Y  LI  +   G+   A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE-----------KGVKE 517
              L  MI  G  P      ++++ L ++G+++ A  + K M +            GV+ 
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           ++     ++  L+  G   EA    + M   G VP+   + S++  L ++ +   A ++ 
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           D    +    ++ ++  +++    AG+  +   +  ++  +G V +  +   LI G  + 
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629

Query: 635 GNTKQA-DILSRMI 647
           GN   A DI   MI
Sbjct: 630 GNINGALDIFQEMI 643



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 221/493 (44%), Gaps = 36/493 (7%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q  +  + + +    ++  AL   R +E       +   +  +I+ L + G+ + A+ + 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M +KG+  D   +  +I  +   G   ++ ++   M +  +   V +Y+AL    ++ 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G++  A+  +++ML  GI P   TY+ M+ GF    +L+ A   F  M ++G S +++T+
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+I+GY   K++D+  +L  EM E  +     +Y T+I G+  V   + AL +  EM S
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+ VT   LL GLCD GK+ +  ++ + M +     KD        GV+       
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS---KKDLDASHPFNGVE------- 508

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
                           +   Y ILI        +  A +L +++  + I+  P +     
Sbjct: 509 ---------------PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV--PDTI---- 547

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIV 437
             +Y+ MI  LC   +  +A   F  +  K    P  V F  LI G+ K G  D   E+ 
Sbjct: 548 --TYSSMIDGLCKQSRLDEATQMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             MGRRG+  +A  YI LI  + + G    A      MI  G  P +   R+++  L+  
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664

Query: 498 GRVQTASRVMKSM 510
             ++ A  +++ +
Sbjct: 665 EELKRAVAMLEKL 677



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/546 (21%), Positives = 248/546 (45%), Gaps = 27/546 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           +++++ +F  M +     SV  +  L  +++R  R  +    + KM  + I    +++N+
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    KL  A+  F  +   G+  DVVT+ T+++G     ++ EA  LF +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             P V+++TT++ G     R  +A+ + D M    ++P  +TY  ++ G+C  G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 287 KVLREM--VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +LR+M  V   IP  +  ++  ++   CK G  + A ++   M    I  +   Y  +I
Sbjct: 240 NLLRKMEEVSHIIP--NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             FC +  +  A +LL +++E++I   P      +  +YN +I      G+  +AE  + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKI--SP------DVVTYNALINAFVKEGKFFEAEELYD 349

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++ +G++ + + ++++I G  K+   D+A  +  +M  +G   +   +  LI+ Y    
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              D    L  M E G    ++ + +++   +  G +  A  +++ M+  G+  ++    
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 524 KILEALLMRGHVEEALGRIDLMMQS--------------GSVPNFDSLLSVLSEKGKTIA 569
            +L+ L   G +++AL    +M +S                V  ++ L+S L  +GK + 
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A +L +    R  + D  +Y  ++D L    +   A  +   +  K    +  +   LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 630 GLNQEG 635
           G  + G
Sbjct: 590 GYCKAG 595



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 225/491 (45%), Gaps = 27/491 (5%)

Query: 170 GFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
           GF     LE AI  F DM +SR +   VV +  ++    R ++ D    L+ +M+ K I 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLP-SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
             + S+  +IK + +  +   AL  F ++    + P+ VT+T LL GLC   ++ E   +
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNL 171

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             +M E    P +   F  L+   C+ G +  A  +L  M+   +      YG +++  C
Sbjct: 172 FHQMFETTCRP-NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A+ LL K+ E   I+ P   +      Y+ +I  LC +G+   A+  F ++ +
Sbjct: 231 KKGDTVSALNLLRKMEEVSHII-PNVVI------YSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KG+  D   +N++I G    G    A ++++ M  R +  D   Y  LI +++++G+  +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+   D M+  G  P +  + S+++   +  R+  A  +   M  KG   NL     +++
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                  +++ +  +  M ++G V +   +++L+      G   AA+ LL   +      
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEK------------GGVTDWKSSDKLIAGLN 632
           D+ + + +LD L   GK  +A   +FK+M+K            G   D ++ + LI+GL 
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 633 QEGNTKQADIL 643
            EG   +A+ L
Sbjct: 523 NEGKFLEAEEL 533



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/529 (21%), Positives = 220/529 (41%), Gaps = 57/529 (10%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M +K ++ D   F +LI+ +     +  ++  F  + +LG+   V ++  L   +    R
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F++M      P   T+  ++ G     ++  A+   + M   G+    +TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 202 MING----------YNRFKKMDE--------------------------AEKLFAEMKEK 225
           +++G           N  +KM+E                          A+ LF EM+EK
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I P + +Y +MI G+ +  R  DA ++  EM    + P+ VTY AL+      GK  E 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           +++  EM+ R I P +   +  ++   CK   L+AA  +   M           +  LI+
Sbjct: 345 EELYDEMLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
            +C A+  D  ++LL ++ E  ++         + ++YN +I      G    A    ++
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLV--------ADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-----------RGVPRDADAYI 453
           ++  G+  D V  + L+ G    G    A E+ K+M +            GV  D   Y 
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI   + +G+  +A+   + M   G  P +  + S+++ L +  R+  A+++  SM  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
               N+     ++      G V++ L     M + G V N  + ++++ 
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 237/496 (47%), Gaps = 6/496 (1%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L R G++  A  +L  M + G+Q  +  +  +++   KKG    ++ +   M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 118 KQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           +++  +  +V  Y A+   + + GR+  A+  F +M  +GI P   TYN M+ GF  S +
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A +  ++M  R IS DVVTYN +IN + +  K  EAE+L+ EM  + I P  I+Y++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI G+    R D A  +F  M +    PN +T+  L+ G C A ++ +  ++L EM E  
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +   D + +  L+      G LNAA D+L+ MI   +  +      L++  C       A
Sbjct: 426 L-VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484

Query: 357 IKLLDKLVEKEIIL---RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           +++   + + +  L    P + ++ +  +YN +I  L + G+  +AE  + ++  +G++ 
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D + ++++I G  K+   D A ++   MG +    +   +  LI  Y + G   D     
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M   G    +  + +++    + G +  A  + + M+  GV  +   +  +L  L  +
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664

Query: 533 GHVEEALGRIDLMMQS 548
             ++ A+  ++ +  S
Sbjct: 665 EELKRAVAMLEKLQMS 680



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 243/554 (43%), Gaps = 26/554 (4%)

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           + ++  M++  +   + S++ L K      +   A   F K+   G+ P   T+  +L G
Sbjct: 99  ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHG 158

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
             +  ++  A+ FF  M       +VVT+ T++NG  R  ++ EA  L   M E  ++PT
Sbjct: 159 LCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            I+Y T++ G         AL +  +M+    + PN V Y+A++  LC  G+  + Q + 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            EM E+ I P D   +  ++   C SG  + A  +L+ M+   I  +   Y  LI  F K
Sbjct: 279 TEMQEKGIFP-DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
              +  A +L D+++ + II  P +       +Y+ MI   C   +   AE  F  +  K
Sbjct: 338 EGKFFEAEELYDEMLPRGII--PNTI------TYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G   + + FN LI G+      D   E++  M   G+  D   Y  LI  +   G+   A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE-----------KGVKE 517
              L  MI  G  P      ++++ L ++G+++ A  + K M +            GV+ 
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           ++     ++  L+  G   EA    + M   G VP+   + S++  L ++ +   A ++ 
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           D    +    ++ ++  +++    AG+  +   +  ++  +G V +  +   LI G  + 
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629

Query: 635 GNTKQA-DILSRMI 647
           GN   A DI   MI
Sbjct: 630 GNINGALDIFQEMI 643



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 221/493 (44%), Gaps = 36/493 (7%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q  +  + + +    ++  AL   R +E       +   +  +I+ L + G+ + A+ + 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M +KG+  D   +  +I  +   G   ++ ++   M +  +   V +Y+AL    ++ 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G++  A+  +++ML  GI P   TY+ M+ GF    +L+ A   F  M ++G S +++T+
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+I+GY   K++D+  +L  EM E  +     +Y T+I G+  V   + AL +  EM S
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+ VT   LL GLCD GK+ +  ++ + M +     KD        GV+       
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS---KKDLDASHPFNGVE------- 508

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
                           +   Y ILI        +  A +L +++  + I+  P +     
Sbjct: 509 ---------------PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV--PDTI---- 547

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIV 437
             +Y+ MI  LC   +  +A   F  +  K    P  V F  LI G+ K G  D   E+ 
Sbjct: 548 --TYSSMIDGLCKQSRLDEATQMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             MGRRG+  +A  YI LI  + + G    A      MI  G  P +   R+++  L+  
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664

Query: 498 GRVQTASRVMKSM 510
             ++ A  +++ +
Sbjct: 665 EELKRAVAMLEKL 677



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/546 (21%), Positives = 247/546 (45%), Gaps = 27/546 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           +++++ +F  M +     SV  +  L  +++R  R  +    + KM  + I    +++N+
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    KL  A+  F  +   G+  DVVT+ T+++G     ++ EA   F +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             P V+++TT++ G     R  +A+ + D M    ++P  +TY  ++ G+C  G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 287 KVLREM--VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +LR+M  V   IP  +  ++  ++   CK G  + A ++   M    I  +   Y  +I
Sbjct: 240 NLLRKMEEVSHIIP--NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             FC +  +  A +LL +++E++I   P      +  +YN +I      G+  +AE  + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKI--SP------DVVTYNALINAFVKEGKFFEAEELYD 349

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++ +G++ + + ++++I G  K+   D+A  +  +M  +G   +   +  LI+ Y    
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              D    L  M E G    ++ + +++   +  G +  A  +++ M+  G+  ++    
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 524 KILEALLMRGHVEEALGRIDLMMQS--------------GSVPNFDSLLSVLSEKGKTIA 569
            +L+ L   G +++AL    +M +S                V  ++ L+S L  +GK + 
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A +L +    R  + D  +Y  ++D L    +   A  +   +  K    +  +   LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 630 GLNQEG 635
           G  + G
Sbjct: 590 GYCKAG 595



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 116/529 (21%), Positives = 221/529 (41%), Gaps = 57/529 (10%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M +K ++ D   F +LI+ +     +  ++  F  + +LG+   V ++  L   +    R
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A  +F++M      P   T+  ++ G     ++  A+   + M   G+    +TY T
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 202 MING----------YNRFKKMDE--------------------------AEKLFAEMKEK 225
           +++G           N  +KM+E                          A+ LF EM+EK
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I P + +Y +MI G+ +  R  DA ++  EM    + P+ VTY AL+      GK  E 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           +++  EM+ R I P +   +  ++   CK   L+AA  +   M           +  LI+
Sbjct: 345 EELYDEMLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
            +C A+  D  ++LL ++ E  ++         + ++YN +I      G    A    ++
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLV--------ADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-----------RGVPRDADAYI 453
           ++  G+  D V  + L+ G    G    A E+ K+M +            GV  D   Y 
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI   + +G+  +A+   + M   G  P +  + S+++ L +  R+  A+++  SM  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
               N+     ++      G V++ L     M + G V N  + ++++ 
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 224/491 (45%), Gaps = 27/491 (5%)

Query: 170 GFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
           GF     LE AI  F DM +SR +   VV +  ++    R ++ D    L+ +M+ K I 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLP-SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
             + S+  +IK + +  +   AL  F ++    + P+ VT+T LL GLC   ++ E    
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             +M E    P +   F  L+   C+ G +  A  +L  M+   +      YG +++  C
Sbjct: 172 FHQMFETTCRP-NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A+ LL K+ E   I+ P   +      Y+ +I  LC +G+   A+  F ++ +
Sbjct: 231 KKGDTVSALNLLRKMEEVSHII-PNVVI------YSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KG+  D   +N++I G    G    A ++++ M  R +  D   Y  LI +++++G+  +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+   D M+  G  P +  + S+++   +  R+  A  +   M  KG   NL     +++
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                  +++ +  +  M ++G V +   +++L+      G   AA+ LL   +      
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEK------------GGVTDWKSSDKLIAGLN 632
           D+ + + +LD L   GK  +A   +FK+M+K            G   D ++ + LI+GL 
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 633 QEGNTKQADIL 643
            EG   +A+ L
Sbjct: 523 NEGKFLEAEEL 533


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 151/649 (23%), Positives = 288/649 (44%), Gaps = 36/649 (5%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK--------LNH------ 74
           +L    N + AL+FF  VER   F    +    +I IL    K        LN+      
Sbjct: 67  LLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLNNYVFGDA 126

Query: 75  -------ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
                    C+L    + G + D  +F  L++S+ +   + ++V+ F  M +  +   V 
Sbjct: 127 TPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVP 186

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
             + L   ++RR     A++ +++M+  GI    +T +V++       K E   +FF++ 
Sbjct: 187 IMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEA 246

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           K RG+ +D   Y+ ++    R   ++ A +L  EM+E    P+  +YT +I   V     
Sbjct: 247 KGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNF 306

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +ALR+ DEM S  +  N +   +L+ G C  G +    ++  E+VE  + P D  +F  
Sbjct: 307 VEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVP-DVVIFSV 365

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+    K G +  A ++   M  + I         L+E F +  + + A  L D+ VE  
Sbjct: 366 LINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG 425

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSK 426
           I             +YN +++ L   G+  +A   + +++ KG+    V++NNLI GH K
Sbjct: 426 IT---------NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCK 476

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           +G  D A+ ++K +  RG+  +A  Y  LI+ + +KG+   A    + M+    +P    
Sbjct: 477 KGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHT 536

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F +V+  L + GRV      + + +++G          I++     G V+ AL     M 
Sbjct: 537 FNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMC 596

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
           +SG  P+   + SL+  L +  K   A+++      +   +D+ +Y  ++D         
Sbjct: 597 ESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDME 656

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEM 651
           +A     ++++ G   +    + +I+G     N + A ++   MI+ ++
Sbjct: 657 SASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKV 705



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/490 (23%), Positives = 233/490 (47%), Gaps = 19/490 (3%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           +G +N A  +  ++ + GV  D  +F VLI    K G ++++ +++  MK +G++ +V  
Sbjct: 338 LGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFI 397

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
            ++L +    +     A   F++ +  GI     TYN++L       K+  A   +E M 
Sbjct: 398 VNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVV-TYNILLKWLGELGKVNEACNLWEKMV 456

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           S+GI+  +V+YN +I G+ +   MD+A  +   + E+ ++P  ++YT +I G+     ++
Sbjct: 457 SKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSE 516

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD---NSVF 305
            A  +F++M + ++ P   T+  ++ GL   G++ E Q  L   +++         NS+ 
Sbjct: 517 RAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSII 576

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
                   K G +++A    + M    I  +   Y  LI+  CK+     A+++   +  
Sbjct: 577 DGFF----KEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKY 632

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
           K         + ++  +Y+ +I   C       A  FF +L+  G+  + V +N++I G 
Sbjct: 633 K--------GMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGF 684

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
               N ++A  + + M +  VP D   Y  +I   L++G+ + A      M+     P  
Sbjct: 685 IHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDI 744

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR-GHVEEALGRID 543
            ++  ++  L  +G+++ AS+++K M    +  ++ LV  IL A   R G+++EA    D
Sbjct: 745 VMYTVLINGLSNNGQLENASKILKEMDGNNITPSV-LVYNILIAGNFREGNLQEAFRLHD 803

Query: 544 LMMQSGSVPN 553
            M+  G VP+
Sbjct: 804 EMLDKGLVPD 813



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/448 (22%), Positives = 192/448 (42%), Gaps = 58/448 (12%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE-------------ILGRV--GKLN 73
           V HG  N        +W+   G  N       KM+              ILG    G ++
Sbjct: 422 VEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMD 481

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +L  + ++G++ +   + +LI+ + KKG  + +  +F+ M    +  +  +++ + 
Sbjct: 482 KAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVI 541

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + GR    +   N  + +G   T  TYN ++ GFF    +++A+  + +M   GIS
Sbjct: 542 NGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGIS 601

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DV+TY ++I+G  +  K+  A ++ ++MK K ++  V++Y+ +I G+  +   + A + 
Sbjct: 602 PDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKF 661

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F E+    + PN V Y +++ G      M     + +EM++  +P  D  V+  ++G   
Sbjct: 662 FTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPC-DLQVYTSIIGGLL 720

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G L+ A D+   M+   I  +   Y +LI         + A K+L             
Sbjct: 721 KEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILK------------ 768

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSA 433
              +M+ ++  P +                           + +N LI G+ +EGN   A
Sbjct: 769 ---EMDGNNITPSV---------------------------LVYNILIAGNFREGNLQEA 798

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLR 461
           F +   M  +G+  D   Y  L+   L+
Sbjct: 799 FRLHDEMLDKGLVPDDTTYDILVNGKLK 826



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 111/486 (22%), Positives = 203/486 (41%), Gaps = 46/486 (9%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E+A+    + K+  + P  F  N +    H     EHA   F      G+ N    T+  
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITN--VVTYNI 434

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +++ LG +GK+N A  +   M  KG+      +  LI  + KKG + ++  +   + + G
Sbjct: 435 LLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERG 494

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +  +Y  L     ++G    A   F +M++  I PT HT+N ++ G   + ++    
Sbjct: 495 LKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQ 554

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +   +G     +TYN++I+G+ +   +D A   + EM E  I P VI+YT++I G 
Sbjct: 555 DKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGL 614

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               +   AL +  +MK   +K + V Y+AL+ G C    M    K   E+++  + P +
Sbjct: 615 CKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTP-N 673

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             V+  ++       ++ AA ++ + MI+  +P +   Y  +I    K      A+ L  
Sbjct: 674 TVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYS 733

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
           +++ K+I                                          V D V +  LI
Sbjct: 734 EMLSKDI------------------------------------------VPDIVMYTVLI 751

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G S  G  ++A +I+K M    +      Y  LI    R+G   +A    D M++ G  
Sbjct: 752 NGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLV 811

Query: 482 PASSLF 487
           P  + +
Sbjct: 812 PDDTTY 817



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 124/290 (42%), Gaps = 46/290 (15%)

Query: 1   MAERAWTTRLQNKIRALVPQ--FDHNLVYNVL------HGAKNSEHALQFFRWVERAGLF 52
           + +    +  Q+K+   + Q     ++ YN +       GA +S  AL  +R +  +G+ 
Sbjct: 544 LGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDS--ALLAYREMCESGI- 600

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           + D  T+  +I+ L +  K+  A  +  DM  KG++ D   +  LI+ + K   ++ + K
Sbjct: 601 SPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASK 660

Query: 113 IFDIMKQLG-----------------------------------VERSVKSYDALFKLIL 137
            F  +  +G                                   V   ++ Y ++   +L
Sbjct: 661 FFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLL 720

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G+  +A   +++MLS+ I P    Y V++ G   + +LE A +  ++M    I+  V+
Sbjct: 721 KEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVL 780

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            YN +I G  R   + EA +L  EM +K + P   +Y  ++ G + V   
Sbjct: 781 VYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 130/537 (24%), Positives = 242/537 (45%), Gaps = 24/537 (4%)

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           F  M   G+   V +++ L   +  RG++  A     KM   G+ PT  TYN +L  +  
Sbjct: 163 FKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCK 222

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
             + + A +  + M S+GI +DV TYN  I+   R  +  +   L   M+   + P  I+
Sbjct: 223 KGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEIT 282

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y T+I G+V   + + A ++FDEM  F++ PN++TY  L+ G C  G + E  +++  MV
Sbjct: 283 YNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMV 342

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
              + P +   +  LL    K+      + +L+ M    +      Y  +I+  CK  M 
Sbjct: 343 SHGLRPNE-VTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGML 401

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           + A++LLD ++        + +++ +  +++ +I      G+   A+    ++ K G++ 
Sbjct: 402 EEAVQLLDDML--------KVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVP 453

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC--LIESYLRKGEPADAKT 470
           + + ++ LI  + K G    A     +M   G    AD + C  L+ ++ R G+  +A+ 
Sbjct: 454 NGILYSTLIYNYCKMGYLKEALNAYAVMNHSG--HVADHFTCNVLVATFCRYGKLEEAEY 511

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            ++ M   G  P S  F  ++      G    A  V   M   G   +L     +L+ L 
Sbjct: 512 FMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLC 571

Query: 531 MRGHVEEALGRIDLMMQSGSVPN------FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           + GH+ EAL       +   +PN      F++ L+     G    A+ L++  +  D + 
Sbjct: 572 IGGHINEAL---KFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLP 628

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGLNQEGNTKQA 640
           D  +Y  ++  L   GK + A  +  K +EKG ++ +      L+ GL + G+ + A
Sbjct: 629 DNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAA 685



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 141/565 (24%), Positives = 239/565 (42%), Gaps = 43/565 (7%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           IL  M   GV+     +  +I+   K G+++E+V++ D M ++ V   V ++  L     
Sbjct: 372 ILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFF 431

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G+   AK    KM   G+ P    Y+ +++ +     L+ A+  +  M   G   D  
Sbjct: 432 RVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHF 491

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           T N ++  + R+ K++EAE     M    ++P  +++  +I GY     A  A  +FD+M
Sbjct: 492 TCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKM 551

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK-DNSVFMKLLGVQCKSG 316
            SF   P+  TY  LL GLC  G + E  K    +  R IP   DN +F   L   C+SG
Sbjct: 552 NSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRL--RCIPNAVDNVIFNTKLTSTCRSG 609

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
           +L+ A  ++  M+      +   Y  LI   CK      A+ L  K +EK  +L P   +
Sbjct: 610 NLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKG-LLSPNPAV 668

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                 Y  ++  L  +G    A   F +++ K V  D VAFN +I  +S++G      +
Sbjct: 669 ------YTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVND 722

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           I+  M  + +  +   Y  L+  Y ++   A        MI  G  P    + S++    
Sbjct: 723 ILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLIL--- 779

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
             G  Q+ S               D+  KIL  + + GHV +                F+
Sbjct: 780 --GYCQSKS--------------FDVAIKILRWITLEGHVIDRF-------------TFN 810

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            L++   E+ +   A +L+        I ++ +Y  + + L+       A+ +L  ++E 
Sbjct: 811 MLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLES 870

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQA 640
           G V   K    LI G+ + GN K A
Sbjct: 871 GSVPTNKQYITLINGMCRVGNIKGA 895



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/587 (22%), Positives = 248/587 (42%), Gaps = 31/587 (5%)

Query: 53   NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
            N D  T   +I    RVGK+N+A+ I+  M K G+  +  ++  LI +Y K G ++E++ 
Sbjct: 417  NPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALN 476

Query: 113  IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
             + +M   G      + + L     R G+   A+ + N M   G++P   T++ ++ G+ 
Sbjct: 477  AYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYG 536

Query: 173  LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
             S     A   F+ M S G    + TY  ++ G      ++EA K F  ++        +
Sbjct: 537  NSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNV 596

Query: 233  SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
             + T +          DA+ + +EM + D  P+  TYT L+ GLC  GK+V    +  + 
Sbjct: 597  IFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKA 656

Query: 293  VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
            +E+ +   + +V+  L+    K GH  AA  + + M+   +  +   + ++I+ + +   
Sbjct: 657  IEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGK 716

Query: 353  YDRAIKLLDKLVEKE---------IILRPQSTLDMEASS---YNPMIQH----------- 389
              +   +L  +  K          I+L   +     A     Y  MI+H           
Sbjct: 717  TSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHS 776

Query: 390  ----LCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
                 C +     A    R +  +G V+D   FN LI    +      AFE+VK M +  
Sbjct: 777  LILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFM 836

Query: 445  VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
            V  + D Y  L    +R  +   A   L  ++E G  P +  + +++  +   G ++ A 
Sbjct: 837  VIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAM 896

Query: 505  RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVL 561
            ++   M   G+  +   ++ I+  L     +E A+  +DLM++   +P    F +L+ V 
Sbjct: 897  KLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVY 956

Query: 562  SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
             ++     A++L          +D+ +Y  ++  L A G    A+ +
Sbjct: 957  CKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKL 1003



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 148/679 (21%), Positives = 277/679 (40%), Gaps = 62/679 (9%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L P  +  N+V   L   +  +    FF+ +   G+   D  T   ++  L   GK  
Sbjct: 134 RGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGIC-PDVATFNILLNALCERGKFK 192

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
           +A  +L  M + GV      +  L+  Y KKG  + + ++ D M   G+   V +Y+   
Sbjct: 193 NAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFI 252

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + R  R         +M    + P   TYN ++ GF    K+E A + F++M    + 
Sbjct: 253 DNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLL 312

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP------------------------ 229
            + +TYNT+I G+     + EA +L   M    + P                        
Sbjct: 313 PNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSI 372

Query: 230 -----------TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
                      + ISYT MI G       ++A+++ D+M    V P+ VT++ L+ G   
Sbjct: 373 LERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFR 432

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            GK+   ++++ +M +  + P +  ++  L+   CK G+L  A +    M       +  
Sbjct: 433 VGKINNAKEIMCKMYKTGLVP-NGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHF 491

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS--TLDMEASSYNPMIQHLCHNGQT 396
              +L+  FC+            KL E E  +   S   LD  + +++ +I    ++G  
Sbjct: 492 TCNVLVATFCR----------YGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDA 541

Query: 397 GKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI-- 453
            KA   F ++   G    +  +  L++G    G+ + A +    +  R +P   D  I  
Sbjct: 542 LKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRL--RCIPNAVDNVIFN 599

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
             + S  R G  +DA   ++ M+ +   P +  + +++  L + G++  A  +    +EK
Sbjct: 600 TKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEK 659

Query: 514 G-VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           G +  N  +   +++ LL  GH   AL   + M+     P+   F+ ++   S KGKT  
Sbjct: 660 GLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSK 719

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
              +L     ++   +LA+Y  +L            + +   ++  G + D  S   LI 
Sbjct: 720 VNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLIL 779

Query: 630 GLNQEGNTKQADILSRMIR 648
           G  Q   +K  D+  +++R
Sbjct: 780 GYCQ---SKSFDVAIKILR 795



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 182/434 (41%), Gaps = 56/434 (12%)

Query: 68   RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
            R G L+ A  ++ +M       D   +  LI    KKG +  ++    ++    +E+ + 
Sbjct: 607  RSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAAL----LLSGKAIEKGLL 662

Query: 128  S-----YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
            S     Y +L   +L+ G    A   F +ML++ +EP    +NV++  +    K      
Sbjct: 663  SPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVND 722

Query: 183  FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
                MKS+ +  ++ TYN +++GY +   M     L+ +M      P   S+ ++I GY 
Sbjct: 723  ILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYC 782

Query: 243  AVERADDALRIF-----------------------------------DEMKSFDVKPNAV 267
              +  D A++I                                     +M  F V PN  
Sbjct: 783  QSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVD 842

Query: 268  TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
            TY AL  GL       +  +VL+ ++E    P  N  ++ L+   C+ G++  A  +   
Sbjct: 843  TYNALFNGLIRTSDFHKAHRVLQVLLESGSVPT-NKQYITLINGMCRVGNIKGAMKLQDE 901

Query: 328  MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
            M  L I +       ++     ++  + AI +LD ++E +II  P        +++  ++
Sbjct: 902  MKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQII--PT------VATFTTLM 953

Query: 388  QHLCHNGQTGKAEIFFRQLMKKG--VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
               C      KA +  R +M+     LD VA+N LI G    G+ ++AF++ + M +R +
Sbjct: 954  HVYCKEANVAKA-LELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDL 1012

Query: 446  PRDADAYICLIESY 459
              +   YI LI+S+
Sbjct: 1013 WPNTSIYIVLIDSF 1026



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 163/394 (41%), Gaps = 48/394 (12%)

Query: 50   GLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQE 109
            GL + +   +  +++ L + G    A  I  +M  K V+ D   F V+I+ Y +KG   +
Sbjct: 660  GLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSK 719

Query: 110  SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY--FNKMLSEGIEPTRHTYNVM 167
               I   MK   +  ++ +Y+ L     +  R+ MA+ +  +  M+  G  P + +++ +
Sbjct: 720  VNDILSTMKSKNLCFNLATYNILLHGYAK--RHAMARCFMLYKDMIRHGFLPDKFSWHSL 777

Query: 168  LWGFFLSLKLETAIRFFEDMKSRGISLD-------------------------------- 195
            + G+  S   + AI+    +   G  +D                                
Sbjct: 778  ILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMV 837

Query: 196  ---VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
               V TYN + NG  R     +A ++   + E    PT   Y T+I G   V     A++
Sbjct: 838  IPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMK 897

Query: 253  IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
            + DEMK+  +  + V  +A++ GL ++ K+     VL  M+E  I P   + F  L+ V 
Sbjct: 898  LQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTV-ATFTTLMHVY 956

Query: 313  CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
            CK  ++  A ++   M    +  +   Y +LI   C     + A KL +++ +++  L P
Sbjct: 957  CKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRD--LWP 1014

Query: 373  QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
             +++      Y  +I   C      ++E   R +
Sbjct: 1015 NTSI------YIVLIDSFCAGNYQIESEKLLRDI 1042



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/212 (16%), Positives = 95/212 (44%), Gaps = 2/212 (0%)

Query: 17   LVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
            ++P  D +N ++N L    +   A +  + +  +G    +++ ++ +I  + RVG +  A
Sbjct: 837  VIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQ-YITLINGMCRVGNIKGA 895

Query: 76   RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
              +  +M   G+         ++        ++ ++ + D+M ++ +  +V ++  L  +
Sbjct: 896  MKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHV 955

Query: 136  ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
              +      A    + M    ++     YNV++ G   +  +E A + +E+MK R +  +
Sbjct: 956  YCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPN 1015

Query: 196  VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
               Y  +I+ +       E+EKL  +++++ +
Sbjct: 1016 TSIYIVLIDSFCAGNYQIESEKLLRDIQDREL 1047


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 213/426 (50%), Gaps = 45/426 (10%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+     G++  +  +L+++ + G   +  ++  LI+   KKG ++++  +F  M +LG
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  + ++Y  L   + + G        + KM  +G+ P  +TYN ++       + + A 
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F++M+ RG+S ++VTYNT+I G  R  K++EA K+  +MK   I P +I+Y T+I G+
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             V +   AL +  ++KS  + P+ VTY  L+ G C  G      K+++EM ER I P  
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +                                    Y ILI+ F +++  ++AI+L  
Sbjct: 409 VT------------------------------------YTILIDTFARSDNMEKAIQL-- 430

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           +L  +E+ L P      +  +Y+ +I   C  GQ  +A   F+ +++K    + V +N +
Sbjct: 431 RLSMEELGLVP------DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G+ KEG+   A +++K M  + +  +  +Y  +IE   ++ +  +A+  ++ MI+ G 
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544

Query: 481 SPASSL 486
            P++S+
Sbjct: 545 DPSTSI 550



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 195/458 (42%), Gaps = 28/458 (6%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y+ +    ++     ++  YFN+M+  G  P  + +N +L     S        FF + K
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           S+ + LDV ++  +I G     +++++  L  E+ E    P V+ YTT+I G       +
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A  +F EM    +  N  TYT L+ GL   G       V ++  E Y   +++ VF  L
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNG-------VKKQGFEMYEKMQEDGVFPNL 268

Query: 309 LGVQC------KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
               C      K G    A  V   M    +      Y  LI   C+    + A K++D+
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
           +            ++    +YN +I   C  G+ GKA    R L  +G L P  V +N L
Sbjct: 329 M--------KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG-LSPSLVTYNIL 379

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G  ++G+   A ++VK M  RG+      Y  LI+++ R      A     SM E G 
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    +  ++      G++  ASR+ KSMVEK  + N  +   ++      G    AL 
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499

Query: 541 RIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLD 575
            +  M +    PN  S   ++ VL ++ K+  A +L++
Sbjct: 500 LLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 212/471 (45%), Gaps = 12/471 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++EV+I SY +   +  S+  F+ M   G       ++ L   ++    +     +FN+ 
Sbjct: 96  LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            S+ +    +++ +++ G   + ++E +     ++   G S +VV Y T+I+G  +  ++
Sbjct: 156 KSKVVLDV-YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           ++A+ LF EM +  +     +YT +I G            ++++M+   V PN  TY  +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  G+  +  +V  EM ER +   +   +  L+G  C+   LN A  V+  M    
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSC-NIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I      Y  LI+ FC      +A+ L   L  K   L P         +YN ++   C 
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDL--KSRGLSPSLV------TYNILVSGFCR 385

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G T  A    +++ ++G+    V +  LI   ++  N + A ++   M   G+  D   
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI  +  KG+  +A     SM+E    P   ++ +++    ++G    A +++K M 
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
           EK +  N+     ++E L      +EA   ++ M+ SG  P+  S+LS++S
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS-TSILSLIS 555



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 143/279 (51%), Gaps = 1/279 (0%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + +N V N L     ++ A Q F  +   G+ + +  T+  +I  L R  KLN A  ++ 
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGV-SCNIVTYNTLIGGLCREMKLNEANKVVD 327

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G+  +   +  LI+ +   G + +++ +   +K  G+  S+ +Y+ L     R+G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A +   +M   GI+P++ TY +++  F  S  +E AI+    M+  G+  DV TY+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G+    +M+EA +LF  M EKN EP  + Y TMI GY     +  AL++  EM+  
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           ++ PN  +Y  ++  LC   K  E ++++ +M++  I P
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/454 (21%), Positives = 202/454 (44%), Gaps = 15/454 (3%)

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y  +IN Y + + ++ +   F EM +    P    +  ++   V     +     F+E K
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           S  V  +  ++  L+ G C+AG++ +   +L E+ E    P +  ++  L+   CK G +
Sbjct: 157 S-KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSP-NVVIYTTLIDGCCKKGEI 214

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A D+   M +L +      Y +LI    K  +  +  ++ +K+ E  +   P      
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF--PN----- 267

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
              +YN ++  LC +G+T  A   F ++ ++GV  + V +N LI G  +E   + A ++V
Sbjct: 268 -LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M   G+  +   Y  LI+ +   G+   A +    +   G SP+   +  ++      
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G    A++++K M E+G+K +      +++      ++E+A+     M + G VP+   +
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
             L+     KG+   A +L    + ++C  +   Y  ++      G +  A  +L ++ E
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           K    +  S   +I  L +E  +K+A+ ++ +MI
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 102/214 (47%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           N +  T+  +I+    VGKL  A  +  D+  +G+      + +L+  + +KG    + K
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +   M++ G++ S  +Y  L     R      A +    M   G+ P  HTY+V++ GF 
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
           +  ++  A R F+ M  +    + V YNTMI GY +      A KL  EM+EK + P V 
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
           SY  MI+      ++ +A R+ ++M    + P+ 
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 144/323 (44%), Gaps = 14/323 (4%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y ++I ++ +++  + +I   +++V+   +  P S      + +N ++  +  +    + 
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFV--PGS------NCFNYLLTFVVGSSSFNQW 148

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
             FF +   K VLD  +F  LI+G  + G  + +F+++  +   G   +   Y  LI+  
Sbjct: 149 WSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC 208

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            +KGE   AK     M + G       +  ++  LF++G  +    + + M E GV  NL
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDF 576
                ++  L   G  ++A    D M + G   ++  +++L+  L  + K   A K++D 
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
                   +L +Y  ++D     GK   A S+   +  +G      + + L++G  ++G+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388

Query: 637 TKQADILSRMIRGEMSRGSQKEK 659
           T  A   ++M++    RG +  K
Sbjct: 389 TSGA---AKMVKEMEERGIKPSK 408


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 143/627 (22%), Positives = 267/627 (42%), Gaps = 92/627 (14%)

Query: 73  NHARCILLDMPK--KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ-LGVERSVKSY 129
           +H  C+L  +P+     ++ E    V++ ++ +  +   ++  F  +   LG    ++S+
Sbjct: 63  SHLPCLLNLLPRLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSH 122

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEG-----IEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           +AL    +R  R+  A  +F   LS G     I P   TYN++L        L+ A+  F
Sbjct: 123 NALLDAFVRARRFSDADAFFAS-LSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLF 181

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           + ++ R ++ D +TY+T++ G  +  ++D A  L  EM    ++P V+ Y  ++ G    
Sbjct: 182 DSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKA 241

Query: 245 ERADDALRIFDEM-KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
              +  +R++D++ K    +PN  TY  +L GLC  G+  EV +V   MV   + P D  
Sbjct: 242 GEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP-DVI 300

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE------------ 351
            +  L+   C+SG ++ AA V   +I+  +  +A  Y  L++ FC+A             
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA 360

Query: 352 ----------------------MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
                                 M D AI+L D L+EK++   P +       ++  +I  
Sbjct: 361 GFAGLRNLRTYNIMIKGLFDSGMVDEAIELWD-LLEKDVACIPDTV------TFGTLIHG 413

Query: 390 LCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC NG   KA   F +    G  LD  +++++I G    G    A ++ + M + G   +
Sbjct: 414 LCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPN 473

Query: 449 ADAYICLIESYLRKGEPADA-------------------KTALDS--------------- 474
           +  Y  LI  + +    +DA                    T +D                
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAR 533

Query: 475 -MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+E+G +P  + + S++  LF D ++  A  + K ++ KG+K ++ +   ++  L   G
Sbjct: 534 EMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG 593

Query: 534 HVEEALGRIDLMMQSGSVP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
            V+EAL     M +  + P     +++L+  L E G    A  L           D+ SY
Sbjct: 594 KVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKG 616
              +  L +  +      +L +++ +G
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRG 680



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 120/546 (21%), Positives = 244/546 (44%), Gaps = 20/546 (3%)

Query: 15  RALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P    +N+V   L    + + A+  F  + R  +   D  T+  ++  L +  +L+
Sbjct: 152 RRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQV-APDCITYSTLMCGLAKQDRLD 210

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD-IMKQLGVERSVKSYDAL 132
           HA  +L +MP+ GVQ D   +  L+    K G  ++ ++++D ++K  G   ++ +Y+ +
Sbjct: 211 HALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVM 270

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + + GR+      + +M++  ++P   TY +++ G   S  ++ A R + ++   G+
Sbjct: 271 LDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGL 330

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
            +D   YN+++ G+ +  ++ EA K +       +   + +Y  MIKG       D+A+ 
Sbjct: 331 VIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIE 389

Query: 253 IFDEM-KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF--MKLL 309
           ++D + K     P+ VT+  L+ GLC  G      K      E  +  K   VF    ++
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNGF---ANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G L  A  V + M +      +  Y  LI  FC+      A+++  K+ +    
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD---- 502

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
               +       +YN +I  LC   +  +A    R++++ G   D   + +LIRG   + 
Sbjct: 503 ----NGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL-F 487
             D A  I K +  +G+  D   +  LI      G+  +A      M E  + P + + +
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTY 618

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++M+ L+E G +  A+ +  S+ E G++ ++      ++ L     + E +  +D ++ 
Sbjct: 619 NTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678

Query: 548 SGSVPN 553
            G +P 
Sbjct: 679 RGIIPT 684



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 38/284 (13%)

Query: 28  NVLHGAKNSEHALQFFRWVERAGLFNH--DRETHLKMIEILGRVGKLNHARCILLDMPKK 85
            ++HG   +  A + F   E A +     D  ++  MI  L  VG+L  A  +   M K 
Sbjct: 409 TLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKD 468

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G + +  ++  LI  + +     ++V+I+  M   G   +V +Y+ L   + +  +Y  A
Sbjct: 469 GCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA 528

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV--------- 196
                +M+  G  P   TY  ++ G F   K++ A+  ++ +  +G+ +DV         
Sbjct: 529 SSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHG 588

Query: 197 ---------------------------VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
                                      VTYNT+++G      +D+A  L+  + E  +EP
Sbjct: 589 LCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEP 648

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            +ISY T IKG  + +R  + +++ DE+ S  + P  +T+  L+
Sbjct: 649 DIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 219/478 (45%), Gaps = 15/478 (3%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+   + +++ L            A     K+L  G EP   T+N ++ G  L+ K++ A
Sbjct: 98  GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           + F + + + G  LD  +Y T+ING  +  +   A ++  ++  K ++  V+ Y T+I  
Sbjct: 158 LHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDS 217

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +   DA  ++ +M +  + P+ VT++AL+ G C  G++ E   + REMV + I P 
Sbjct: 218 LCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINP- 276

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  L+   CK G+L  A ++L  M++  +      Y  L++ +C     ++A  +L
Sbjct: 277 DYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVL 336

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + +         Q      A SY  MI   C      +A   F  +  KG+  D V +N+
Sbjct: 337 NTI--------SQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNS 388

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED- 478
           LI G  K G    A+E+V  M   G P +   Y CLI++ L K    D   AL   I+D 
Sbjct: 389 LIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDA-LCKNHHVDQAIALVKKIKDQ 447

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P    F  ++  L + GR++ A  V + ++ KG   N      ++  L   G  +EA
Sbjct: 448 GIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEA 507

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
              +  M  +G +P+   +++L+  L  K +   A KLL   + RD +  L   E VL
Sbjct: 508 EALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEMVL 565



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 203/439 (46%), Gaps = 46/439 (10%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL F   V   G F+ D+ ++  +I  L ++G+   A  +L  +  K V+ +  M+  +I
Sbjct: 157 ALHFHDHVLALG-FHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTII 215

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +S  K  +V ++ +++  M    +   V ++ AL       G+   A   F +M+ + I 
Sbjct: 216 DSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNIN 275

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P  +T+N+++        L+ A      M   G+  +VVTY+++++GY    ++++A+ +
Sbjct: 276 PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHV 335

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              + +    P   SY TMI G+  ++  D+AL +F++M+   + P+ VTY +L+ GLC 
Sbjct: 336 LNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCK 395

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           +G++    +++ EM                        H N              P    
Sbjct: 396 SGRISYAWELVDEM------------------------HDNGQ------------PANIF 419

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI+  CK    D+AI L+ K+ ++ I  +P      +  ++N +I  LC  G+   
Sbjct: 420 TYNCLIDALCKNHHVDQAIALVKKIKDQGI--QP------DMYTFNILIYGLCKVGRLKN 471

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A+  F+ L+ KG  ++   +N ++ G  KEG  D A  ++  M   G+  DA  Y  LI+
Sbjct: 472 AQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQ 531

Query: 458 SYLRKGEPADAKTALDSMI 476
           +   K E   A+  L  MI
Sbjct: 532 ALFHKDENEKAEKLLREMI 550



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/501 (21%), Positives = 217/501 (43%), Gaps = 58/501 (11%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FNK+L   ++   + Y              TAI     ++  GI+ D+ T+N +IN Y  
Sbjct: 69  FNKILGSLVKSNNNHY-------------PTAISLSRRLEFHGITPDIFTFNILINCYCH 115

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             +M+ A  + A++ +   EP  I++ T+IKG     +  +AL   D + +     +  +
Sbjct: 116 MAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFS 175

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKA 327
           Y  L+ GLC  G+     ++LR++  + +  K N V +  ++   CK   +  A ++   
Sbjct: 176 YGTLINGLCKIGETRTALQMLRKIDGKLV--KINVVMYNTIIDSLCKHKLVIDAYELYSQ 233

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           MI   I  +   +  LI  FC     + A  L  ++V K I        + +  ++N ++
Sbjct: 234 MIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNI--------NPDYYTFNILV 285

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             LC  G    A+     +MK+GV+ + V +++L+ G+      + A  ++  + + G  
Sbjct: 286 DALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAA 345

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            +A +Y  +I  + +     +A +  + M   G +P    + S+++ L + GR+  A  +
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWEL 405

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGK 566
           +  M + G   N+     +++AL    HV++A+  +  +   G  P              
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQP-------------- 451

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
                             D+ ++  ++  L   G+  NA  +   ++ KG   +  + + 
Sbjct: 452 ------------------DMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNI 493

Query: 627 LIAGLNQEGNTKQAD-ILSRM 646
           ++ GL +EG   +A+ +LS+M
Sbjct: 494 MVNGLCKEGLFDEAEALLSKM 514



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 152/344 (44%), Gaps = 44/344 (12%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VG+L  A  +  +M  K +  D   F +L+++  K+G ++ +  +  +M + GV  +V +
Sbjct: 256 VGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVT 315

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y +L        +   AK   N +   G  P  H+Y  M+ GF     ++ A+  F DM+
Sbjct: 316 YSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQ 375

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +GI+ D VTYN++I+G  +  ++  A +L  EM +      + +Y  +I         D
Sbjct: 376 FKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVD 435

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A+ +  ++K   ++P+  T+  L+ GLC  G++   Q V ++++ +             
Sbjct: 436 QAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSK------------- 482

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
                                       A  Y I++   CK  ++D A  LL K+ +  I
Sbjct: 483 -----------------------GYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGI 519

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           I  P      +A +Y  +IQ L H  +  KAE   R+++ + V+
Sbjct: 520 I--P------DAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 146/623 (23%), Positives = 278/623 (44%), Gaps = 51/623 (8%)

Query: 33  AKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE 91
           ++N E A  F+R  +E     N    + L  +E   ++ K   A  +L  M K+G  ++ 
Sbjct: 85  SRNHELAFSFYRKMLETDTFINFVSLSGL--LECYVQMRKTGFAFGVLALMLKRGFAFNV 142

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
               +L++   +     ++V +   M++  +   V SY+ + +          A    N+
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M   G   +  T+ +++  F  + K++ A+ F ++MK  G+  D+V Y ++I G+    +
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           +D  + LF E+ E+   P  I+Y T+I+G+  + +  +A  IF+ M    V+PN  TYT 
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIR 330
           L+ GLC  GK  E  + L  M+E+   P  N+V +  ++   CK G +  A ++++ M +
Sbjct: 323 LIDGLCGVGKTKEALQPLNLMIEKDEEP--NAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
                +   Y IL+   C     D A KLL       ++L+  S  D +  SYN +I  L
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLL------YLMLKDSSYTDPDVISYNALIHGL 434

Query: 391 CHNGQTGKAEIFFRQLMKK-GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C   +  +A   +  L++K G  D V  N L+    K G+ + A E+ K +    + R++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 450 DAYI-----------------------------------CLIESYLRKGEPADAKTALDS 474
           D Y                                    CL+ S  ++G    A    + 
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M  D + P    F  +++   + G +++A  ++  M   G+  +L   +K++   L  G+
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           ++EA+   D M+ SG  P+    DS+L     +G+T    +L+   + +D ++D      
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT 674

Query: 592 VLDALLAAGKTLNAYSILFKIME 614
           V+D +  +   ++    L ++ +
Sbjct: 675 VMDYMCNSSANMDLAKRLLRVTD 697



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 237/544 (43%), Gaps = 46/544 (8%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           ++HN++   L        A+   R + R  L   D  ++  +I       +L  A  +  
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLM-PDVFSYNTVIRGFCEGKELEKALELAN 201

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G  W    + +LI+++ K G + E++     MK +G+E  +  Y +L +     G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                K  F+++L  G  P   TYN ++ GF    +L+ A   FE M  RG+  +V TY 
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G     K  EA +    M EK+ EP  ++Y  +I          DA+ I + MK  
Sbjct: 322 GLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE--RYIPP-------------KDNSVF 305
             +P+ +TY  LL GLC  G + E  K+L  M++   Y  P             K+N + 
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441

Query: 306 MK---------------------LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
                                  LL    K+G +N A ++ K +    I   +  Y  +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + FCK  M + A  LL K+   E  L+P S  D     YN ++  LC  G   +A   F 
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSE--LQP-SVFD-----YNCLLSSLCKEGSLDQAWRLFE 553

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           ++ +     D V+FN +I G  K G+  SA  ++  M R G+  D   Y  LI  +L+ G
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              +A +  D M++ G  P + +  SV++     G     + ++K +V+K +  + +L  
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTC 673

Query: 524 KILE 527
            +++
Sbjct: 674 TVMD 677



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 203/470 (43%), Gaps = 24/470 (5%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +L+ A+  F+     G SL     N M     R +  + A   + +M E +     +S +
Sbjct: 53  QLKNAVSVFQQAVDSGSSLAFAGSNLMAK-LVRSRNHELAFSFYRKMLETDTFINFVSLS 111

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC---DAGKMVEVQKVLREM 292
            +++ YV + +   A  +   M       N   +  LL GLC   + GK V    +LREM
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVS---LLREM 168

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
               + P   S    + G  C+   L  A ++   M           +GILI+ FCKA  
Sbjct: 169 RRNSLMPDVFSYNTVIRGF-CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            D A+  L     KE+       L+ +   Y  +I+  C  G+  + +  F +++++G  
Sbjct: 228 MDEAMGFL-----KEMKFMG---LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD- 278

Query: 413 DPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            P A  +N LIRG  K G    A EI + M  RGV  +   Y  LI+     G+  +A  
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L+ MIE    P +  +  ++  L +DG V  A  +++ M ++  + +      +L  L 
Sbjct: 339 PLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398

Query: 531 MRGHVEEALGRIDLMMQSGS-----VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
            +G ++EA   + LM++  S     V ++++L+  L ++ +   A+ + D  + +    D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             +   +L++ L AG    A  +  +I +   V +  +   +I G  + G
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 131/557 (23%), Positives = 241/557 (43%), Gaps = 82/557 (14%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D+ T+  +I  L + G++  A  +L +M K  VQ +  M+  LI+   K G V +++ + 
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT----------- 163
             + + G+     +Y++L       GR+    +   KM+ E ++P  +T           
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 164 ------------------------YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                                   YN ++ G+     +  A   F  M  RG+  DV+ Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N +I+GY + K +DEA  LF E+  KN+ PT+ SY ++I G     R     ++ DEM  
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               P+ VTY  L+  LC  G+++E   VL  M+++ + P +   +  ++   C   ++N
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP-NIVTYNAMMDGYCLRNNVN 457

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A D+   M++  +  +  +Y +LI  +CK EM D AI L  ++  K +I         +
Sbjct: 458 VAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLI--------PD 509

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +SYN +I  LC+ G+    +                                  E++  
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQ----------------------------------ELLDE 535

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G   D   Y  L++++  K +P D   +L   I +G  P      +++++L +  +
Sbjct: 536 MCDSGQSPDVITYNILLDAFC-KTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEK 594

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           ++ A   +K ++  G   N+     ++ AL   G   EA+  +  M  +   P+   F+ 
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654

Query: 557 LLSVLSEKGKTIAAVKL 573
           ++ VL ++ +T  A KL
Sbjct: 655 IIGVLLQRNETDKAEKL 671



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/553 (22%), Positives = 252/553 (45%), Gaps = 14/553 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F+ L+ +  + G    ++ +F  ++  G+  S+ ++  L      +     A      +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L  G +P   T+N ++ GF ++  +  A+ F +++ ++G   D  TY T+ING ++  ++
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
             A  L  EM++ +++P ++ Y+ +I G        DAL +  ++    +  +AVTY +L
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G+  EV ++L +MV   + P D+  F  L+   CK G +  A  VL  M +  
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVRENVDP-DDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              +   Y  L+E +C  E    A +L +++V++         L+ +  +YN +I   C 
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKR--------GLEPDVLNYNVLIDGYCK 347

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                +A + F++L  K ++  +A +N+LI G    G      +++  M     P D   
Sbjct: 348 TKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT 407

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI++  ++G   +A   L  M++ G  P    + ++M+       V  A  +   MV
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           + G++ ++     ++        V+EA+     M     +P+   ++SL+  L   G+  
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIP 527

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
              +LLD         D+ +Y  +LDA         A S+  +I+E G   D+ ++  ++
Sbjct: 528 HVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIV 586

Query: 629 AGLNQEGNTKQAD 641
             L +    K A+
Sbjct: 587 DNLCKGEKLKMAE 599



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 248/552 (44%), Gaps = 27/552 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           V ++V  F+ M ++        +D L   I+R G Y  A   F ++ S+GI P+  T+ +
Sbjct: 36  VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN----RFKKMDEAEKLFAEM 222
           ++  +F       A      +   G   ++VT+NT+ING+      FK +D  + L A+ 
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
              +      +Y T+I G     +   AL +  EM+   V+PN V Y+AL+ GLC  G +
Sbjct: 156 YLFD----QFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            +   +  ++ ER I   D   +  L+   C  G       +L  M+R ++  +   + I
Sbjct: 212 SDALGLCSQIGERGI-LLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 343 LIENFCKAEMYDRA---IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           LI+  CK      A   + ++ K  EK  I+           +YN +++  C      +A
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIV-----------TYNALMEGYCSRENVHEA 319

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
              F +++K+G+  D + +N LI G+ K    D A  + K +  + +     +Y  LI+ 
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
               G  +  K  LD M      P    +  ++++L ++GR+  A  V+  M++KGVK N
Sbjct: 380 LCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLD 575
           +     +++   +R +V  A    + M++SG  P   N++ L++   +      A+ L  
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFK 499

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
               ++ I D+ASY  ++D L   G+  +   +L ++ + G   D  + + L+    +  
Sbjct: 500 EMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQ 559

Query: 636 NTKQADILSRMI 647
              +A  L R I
Sbjct: 560 PFDKAISLFRQI 571



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 203/437 (46%), Gaps = 60/437 (13%)

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            ++ AR +   M K+G++ D   + VLI+ Y K  +V E++ +F  +    +  ++ SY+
Sbjct: 315 NVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYN 374

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
           +L   +   GR    K+  ++M      P   TYN+++       ++  A+     M  +
Sbjct: 375 SLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKK 434

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G+  ++VTYN M++GY     ++ A+ +F  M +  +EP +++Y  +I GY   E  D+A
Sbjct: 435 GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA 494

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           + +F EM+  ++ P+  +Y +L+ GLC+ G++  VQ++L EM                  
Sbjct: 495 IVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM------------------ 536

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             C SG    + DV+              Y IL++ FCK + +D+AI L  ++VE    +
Sbjct: 537 --CDSGQ---SPDVIT-------------YNILLDAFCKTQPFDKAISLFRQIVEG---I 575

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGN 429
            P      +  + + ++ +LC   +   AE   + L+  G    V  +  LI    K+G+
Sbjct: 576 WP------DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG---------- 479
              A  ++  M     P DA  +  +I   L++ E   A+   + MI  G          
Sbjct: 630 FGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLNQ 689

Query: 480 -HS---PASSLFRSVME 492
            H+   PASS F+SV E
Sbjct: 690 SHNVFFPASSGFQSVTE 706



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 131/582 (22%), Positives = 246/582 (42%), Gaps = 19/582 (3%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  + K G Q +   F  +I  +   G++ +++     +   G      +Y  L   + 
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G+   A     +M    ++P    Y+ ++ G      +  A+     +  RGI LD V
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN++I+G     +  E  +L  +M  +N++P   ++  +I       R  +A  +   M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
                KP+ VTY AL+ G C    + E +++   MV+R + P D   +  L+   CK+  
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP-DVLNYNVLIDGYCKTKM 350

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           ++ A  + K +   ++      Y  LI+  C +       KLLD++          S   
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM--------HGSAQP 402

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
            +  +YN +I  LC  G+  +A      +MKKGV  + V +N ++ G+    N + A +I
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M + G+  D   Y  LI  Y +     +A      M      P  + + S+++ L  
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF-- 554
            GR+     ++  M + G   ++     +L+A       ++A+     +++ G  P+F  
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYT 581

Query: 555 -DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
             +++  L +  K   A   L   L   C  ++ +Y  +++AL   G    A  +L K+ 
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEM-SRG 654
           +     D  + + +I  L Q   T +A+ L    R EM +RG
Sbjct: 642 DNDRPPDAITFEIIIGVLLQRNETDKAEKL----REEMIARG 679



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/446 (22%), Positives = 192/446 (43%), Gaps = 14/446 (3%)

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           RF+ +D+A   F  M      P    +  ++   V +     A+ +F +++S  + P+  
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           T+T L+              +L  +++    P +   F  ++   C +G +  A D  + 
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQP-NLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           ++      +   YG LI    K      A+ LL ++ +  +    Q  L M    Y+ +I
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSV----QPNLVM----YSALI 202

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             LC +G    A     Q+ ++G+ LD V +N+LI G    G      +++  M R  V 
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD 262

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D   +  LI++  ++G   +A+  L  M + G  P    + ++ME       V  A  +
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSE 563
              MV++G++ ++     +++       V+EA+     +     VP   +++SL+  L  
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+     KLLD   G     D+ +Y  ++DAL   G+ L A  +L  +M+KG   +  +
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442

Query: 624 SDKLIAGLNQEGNTKQA-DILSRMIR 648
            + ++ G     N   A DI +RM++
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVK 468


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 225/497 (45%), Gaps = 10/497 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L   G +  A  +L +MP +G      M  V++E+  + G  + +V+   ++
Sbjct: 110 TYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL 169

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G      + + +   I  +G          K+ S G EP   +YN +L G  ++ + 
Sbjct: 170 HAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRW 229

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           +       +M   G   +V T+NT+I    R    ++  +  ++M E    P +  Y T+
Sbjct: 230 DDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATI 289

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G       + A  I   M S+ +KPN V Y  +L GLC A +  E + +L EM +   
Sbjct: 290 IDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 349

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D+  F  L+   C++G ++   ++L+ M+      +   Y  +I  FCK  + D A+
Sbjct: 350 -PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAV 408

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            LL  +       +P +       SY  +++ LC   +   A+     ++++G L +PV 
Sbjct: 409 MLLKNM--SACGCKPNTI------SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVT 460

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN LI    K+G  + A E++K M   G   D  +Y  +I+   + G+  +A   L+ MI
Sbjct: 461 FNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMI 520

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G +P + ++ S+  +L  +GR     ++  S+ +  V+ +  L   ++ +L  R   +
Sbjct: 521 NKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETD 580

Query: 537 EALGRIDLMMQSGSVPN 553
            A+     M+ +G +PN
Sbjct: 581 RAIDFFAYMVSNGCMPN 597



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 183/397 (46%), Gaps = 30/397 (7%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           ++++M + G   +   F  LI    + G+ ++  +    M + G    ++ Y  +   I 
Sbjct: 235 LMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGIC 294

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G + +A    ++M S G++P    YN +L G   + + E A     +M      LD V
Sbjct: 295 KDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV 354

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           T+N +++ + +   +D   +L  +M E    P VI+YTT+I G+      D+A+ +   M
Sbjct: 355 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 414

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            +   KPN ++YT +L GLC A + V+ Q+++  M+++   P +   F  L+   CK G 
Sbjct: 415 SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLP-NPVTFNTLINFMCKKGL 473

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP----- 372
           +  A ++LK M+      +   Y  +I+   KA   + A++LL+ ++ K I         
Sbjct: 474 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 533

Query: 373 ----------------------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
                                  +T+  +A+ YN +I  LC   +T +A  FF  ++  G
Sbjct: 534 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 593

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIV-KIMGRRGV 445
            + +   +  LIRG + EG    A +++ ++  RR V
Sbjct: 594 CMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 630



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/556 (21%), Positives = 231/556 (41%), Gaps = 46/556 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  +I  Y + G V  + ++      + V  +  +Y  + + +  RG    A    ++M 
Sbjct: 79  YNAMIAGYCRAGQVAAARRL---AAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMP 135

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G   T    +V+L          +A+R  + + ++G +LD    N +++       +D
Sbjct: 136 LRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVD 195

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           E  +L  ++     EP ++SY  ++KG    +R DD   +  EM      PN  T+  L+
Sbjct: 196 EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLI 255

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC  G   +V + L +M E    P D  ++  ++   CK GH   A D+L  M    +
Sbjct: 256 AYLCRNGLFEQVHEALSQMPEHGCTP-DLRMYATIIDGICKDGHHEVANDILSRMPSYGL 314

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  +++  C AE ++ A  LL ++ +++  L        +  ++N ++   C N
Sbjct: 315 KPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPL--------DDVTFNILVDFFCQN 366

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G   +      Q+++ G + D + +  +I G  KEG  D A  ++K M   G   +  +Y
Sbjct: 367 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 426

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +++   R     DA+  +  MI+ G  P    F +++  + + G V+ A  ++K M+ 
Sbjct: 427 TIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLV 486

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
            G     DL++                              + +++  L + GKT  A++
Sbjct: 487 NGCSP--DLIS------------------------------YSTVIDGLGKAGKTEEALE 514

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           LL+  + +    +   Y  +  AL   G+T     +   I +    +D    + +I+ L 
Sbjct: 515 LLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLC 574

Query: 633 QEGNTKQA-DILSRMI 647
           +   T +A D  + M+
Sbjct: 575 KRWETDRAIDFFAYMV 590



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 184/426 (43%), Gaps = 25/426 (5%)

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V++Y  MI GY    RA           +  V PNA TY  ++  LC  G + +   VL 
Sbjct: 76  VVAYNAMIAGYC---RAGQVAAARRLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLD 132

Query: 291 EMVER---YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           EM  R     PP  + +    L   C+ G   +A   L+ +       ++G+  +++   
Sbjct: 133 EMPLRGCAATPPMCHVI----LEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAI 188

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           C+    D  ++LL KL        P    + +  SYN +++ LC   +    E    +++
Sbjct: 189 CEQGCVDEGVELLRKL--------PSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMV 240

Query: 408 KKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
           + G    VA FN LI    + G  +   E +  M   G   D   Y  +I+   + G   
Sbjct: 241 RVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHE 300

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
            A   L  M   G  P    + +V++ L    R + A  ++  M ++    + D+   IL
Sbjct: 301 VANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLD-DVTFNIL 359

Query: 527 -EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
            +     G V+  +  ++ M++ G +P+   + ++++   ++G    AV LL       C
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-D 641
             +  SY  VL  L  A + ++A  ++  ++++G + +  + + LI  + ++G  +QA +
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479

Query: 642 ILSRMI 647
           +L +M+
Sbjct: 480 LLKQML 485



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 15/268 (5%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I+ LC  G+T  A    R L   G     VA+N +I G+ + G   +A  +   +    
Sbjct: 50  LIRSLCAAGRTADAA---RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP--- 103

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           VP +A  Y  ++ S   +G  ADA T LD M   G +    +   ++E+    G  ++A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEK 564
           R ++ +  KG   +      ++ A+  +G V+E +  +  +   G  P+  S  +VL  K
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL--K 221

Query: 565 GKTIA-----AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           G  +A       +L+   +   C  ++A++  ++  L   G     +  L ++ E G   
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281

Query: 620 DWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           D +    +I G+ ++G+ + A DILSRM
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRM 309



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 5/153 (3%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A++  + +   G  + D  ++  +I+ LG+ GK   A  +L  M  KG+  +  ++  
Sbjct: 475 EQAIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 533

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +  +  ++G   + +++FD ++   V      Y+A+   + +R     A  +F  M+S G
Sbjct: 534 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 593

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             P   TY +++ G    L  E  +R  +D+ S
Sbjct: 594 CMPNESTYTILIRG----LASEGLVREAQDLLS 622


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 139/615 (22%), Positives = 253/615 (41%), Gaps = 49/615 (7%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +N + AL  +     V  VL   K+   A+++FRW ER     H  E++  ++ +
Sbjct: 48  WGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLV 107

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           + R    +    IL +M   G     +    ++    K   ++E   +  +M++     +
Sbjct: 108 MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y  L           M    F +M   G EPT H +  ++ GF    ++++A+   +
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +MKS  +  D+V YN  I+ + +  K+D A K F E++   ++P  ++YT+MI       
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL-REMVERYIPPKDNSV 304
           R D+A+ +F+ ++     P    Y  ++ G   AGK  E   +L R+  +  IP    SV
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP----SV 343

Query: 305 FMKLLGVQC--KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
                 + C  K G ++ A  V + M + + P     Y ILI+  C+A   D A +L D 
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKKDAAPN-LSTYNILIDMLCRAGKLDTAFELRDS 402

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL-MKKGVLDPVAFNNLI 421
           +         ++ L     + N M+  LC + +  +A   F ++  K    D + F +LI
Sbjct: 403 M--------QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G  K G  D A+++ + M       ++  Y  LI+++   G   D       MI    S
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P   L  + M+ +F+ G  +    + + +  +    +    + ++  L+  G   E    
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY-- 572

Query: 542 IDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
                          L   + E+G                C++D  +Y  V+D     GK
Sbjct: 573 --------------ELFYSMKEQG----------------CVLDTRAYNIVIDGFCKCGK 602

Query: 602 TLNAYSILFKIMEKG 616
              AY +L ++  KG
Sbjct: 603 VNKAYQLLEEMKTKG 617



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 149/617 (24%), Positives = 279/617 (45%), Gaps = 44/617 (7%)

Query: 65  ILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++G    +NH+  +L     M + G +    +F  LI  + K+G V  ++ + D MK   
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++  +  Y+       + G+  MA ++F+++ + G++P   TY  M+     + +L+ A+
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293

Query: 182 RFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
             FE + K+R +      YNTMI GY    K DEA  L    + K   P+VI+Y  ++  
Sbjct: 294 EMFEHLEKNRRVPC-TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              + + D+AL++F+EMK  D  PN  TY  L+  LC AGK+    ++   M +  + P 
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
             +V + ++   CKS  L+ A  + + M  ++  P E   +  LI+   K    D A K+
Sbjct: 412 VRTVNI-MVDRLCKSQKLDEACAMFEEMDYKVCTPDEI-TFCSLIDGLGKVGRVDDAYKV 469

Query: 360 LDKLVEKEIILRPQSTL----------------------DMEASSYNPMIQHL-----C- 391
            +K+++ +   R  S +                      DM   + +P +Q L     C 
Sbjct: 470 YEKMLDSDC--RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527

Query: 392 -HNGQTGKAEIFFRQL-MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              G+  K    F ++  ++ V D  +++ LI G  K G  +  +E+   M  +G   D 
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
            AY  +I+ + + G+   A   L+ M   G  P    + SV++ L +  R+  A  + + 
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
              K ++ N+ + + +++     G ++EA   ++ +MQ G  PN   ++SLL  L +  +
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A+          C  +  +Y  +++ L    K   A+    ++ ++G      S   
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767

Query: 627 LIAGLNQEGNTKQADIL 643
           +I+GL + GN  +A  L
Sbjct: 768 MISGLAKAGNIAEAGAL 784



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 211/472 (44%), Gaps = 46/472 (9%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ ++L  A   + A +    +++AGLF + R  ++ M++ L +  KL+ A  +  +M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI-MVDRLCKSQKLDEACAMFEEM 438

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K    DE  F  LI+  GK G V ++ K+++ M       +   Y +L K     GR 
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498

Query: 143 MMAKRYFNKMLSEGIEPTRH-----------------------------------TYNVM 167
               + +  M+++   P                                      +Y+++
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           + G   +         F  MK +G  LD   YN +I+G+ +  K+++A +L  EMK K  
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
           EPTV++Y ++I G   ++R D+A  +F+E KS  ++ N V Y++L+ G    G++ E   
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +L E++++ + P +   +  LL    K+  +N A    ++M  L        YGILI   
Sbjct: 679 ILEELMQKGLTP-NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL- 406
           CK   +++A     ++ ++   ++P +       SY  MI  L   G   +A   F +  
Sbjct: 738 CKVRKFNKAFVFWQEMQKQG--MKPSTI------SYTTMISGLAKAGNIAEAGALFDRFK 789

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
              GV D   +N +I G S       AF + +   RRG+P      + L+++
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDT 841



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 126/591 (21%), Positives = 258/591 (43%), Gaps = 48/591 (8%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+  +        + A +FF  +E  GL   D  T+  MI +L +  +L+ A  +   +
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K         +  +I  YG  G   E+  + +  +  G   SV +Y+ +   + + G+ 
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A + F +M  +   P   TYN+++     + KL+TA    + M+  G+  +V T N M
Sbjct: 360 DEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++   + +K+DEA  +F EM  K   P  I++ ++I G   V R DDA +++++M   D 
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP----------------------- 299
           + N++ YT+L+    + G+  +  K+ ++M+ +   P                       
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538

Query: 300 -----------KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                       D   +  L+    K+G  N   ++  +M       +   Y I+I+ FC
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K    ++A +LL+++  K          +    +Y  +I  L    +  +A + F +   
Sbjct: 599 KCGKVNKAYQLLEEMKTK--------GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           K + L+ V +++LI G  K G  D A+ I++ + ++G+  +   +  L+++ ++  E  +
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A     SM E   +P    +  ++  L +  +   A    + M ++G+K +      ++ 
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
            L   G++ EA    D    +G VP+   +++++  LS   + + A  L +
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/517 (21%), Positives = 219/517 (42%), Gaps = 12/517 (2%)

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           +SY++L  ++ R   +    +   +M   G  P+ +T   M+ G   + KL       + 
Sbjct: 99  ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM 158

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M+          Y T+I  ++     D    LF +M+E   EPTV  +TT+I+G+    R
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            D AL + DEMKS  +  + V Y   +      GK+    K   E+    + P D   + 
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP-DEVTYT 277

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            ++GV CK+  L+ A ++ + + +         Y  +I  +  A  +D A  LL++   K
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSK 426
             I  P         +YN ++  L   G+  +A   F ++ K    +   +N LI    +
Sbjct: 338 GSI--PSVI------AYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCR 389

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G  D+AFE+   M + G+  +      +++   +  +  +A    + M     +P    
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F S+++ L + GRV  A +V + M++   + N  +   +++     G  E+       M+
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
                P+    ++ +  + + G+      + +    R  + D  SY  ++  L+ AG   
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             Y + + + E+G V D ++ + +I G  + G   +A
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 115/254 (45%), Gaps = 1/254 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+V +          A Q    ++  G F     T+  +I+ L ++ +L+ A  +  + 
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K ++ +  ++  LI+ +GK G + E+  I + + Q G+  ++ ++++L   +++    
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   F  M      P + TY +++ G     K   A  F+++M+ +G+    ++Y TM
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +   + EA  LF   K     P    Y  MI+G     RA DA  +F+E +   +
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828

Query: 263 KPNAVTYTALLPGL 276
             +  T   LL  L
Sbjct: 829 PIHNKTCVVLLDTL 842



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/198 (19%), Positives = 82/198 (41%), Gaps = 35/198 (17%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL- 120
           +I+  G+VG+++ A  IL ++ +KG+  +   +  L+++  K   + E++  F  MK+L 
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 121 ----------------------------------GVERSVKSYDALFKLILRRGRYMMAK 146
                                             G++ S  SY  +   + + G    A 
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
             F++  + G  P    YN M+ G     +   A   FE+ + RG+ +   T   +++  
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842

Query: 207 NRFKKMDEAEKLFAEMKE 224
           ++   +++A  + A ++E
Sbjct: 843 HKNDCLEQAAIVGAVLRE 860


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 152/633 (24%), Positives = 286/633 (45%), Gaps = 38/633 (6%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           AW  +L+ ++R L+       V  VL    +   AL+FF W +R   + HD    ++  E
Sbjct: 177 AWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHD---PIRRPE 233

Query: 65  ILG-------RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
             G       R GKL +A  +L  M K G++ D  +    I        + ++V+  + M
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           + + +E +V +Y+ L K      R   A     +M  +G  P + +Y  ++ GF    K 
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVM-GFLCKEKR 352

Query: 178 ETAIRFFED--MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
              +R   +  +K   +  D VTYNT ++  ++    DEA +   E +E+      + Y+
Sbjct: 353 IKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYS 412

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            ++  +    R D A  I +EM S    P+ VTYT+++ GLC   K+ + +K+LR+M + 
Sbjct: 413 AIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKH 472

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-----IPTEAGHYGILIENFCKA 350
              P   S +  LL   CK+G+   A    + M+ +S     IP  A  Y +L+  F + 
Sbjct: 473 GCKPNTVS-YTALLNGLCKNGNSLEA----REMMNMSEEDWWIPN-AITYSVLMHGFRRE 526

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
                A  L+ ++++K     P           N +IQ LC   +  +A+ F  Q +  G
Sbjct: 527 GKSSEACDLVREMIKKGFFPTPVEI--------NLLIQSLCQEEKVDEAKRFMEQCLNNG 578

Query: 411 V-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
             ++ V F  +I G  ++ + ++A  ++  M       D   Y  +I++  +KG   +A 
Sbjct: 579 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 638

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
                M+  G  P    +R+V+      GRV+   ++++ M+ +  +E      +++E L
Sbjct: 639 KLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKL 696

Query: 530 LMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
              G++E+A   +  ++++ S  + ++   L+     KG  + +  +      R+ I DL
Sbjct: 697 CSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDL 756

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
              EKV   L+  GK+  A  ++ + +E+G ++
Sbjct: 757 KLCEKVSKKLMLEGKSEEADKLILRFVERGRIS 789



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 219/478 (45%), Gaps = 15/478 (3%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           KL  A+R    M+  GI  D+   NT I+      ++D+A +    M+   IEP VI+Y 
Sbjct: 247 KLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYN 306

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +IKGY  + R +DA+ +  EM      P+ ++Y  ++  LC   ++ EV+ ++ +M++ 
Sbjct: 307 CLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKD 366

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
                D   +   + +  K GH + A + L+         +   Y  ++ +FC+    D+
Sbjct: 367 SNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDK 426

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A ++++++  K  I         +  +Y  +I  LC   +  +A+   RQ+ K G   + 
Sbjct: 427 AKEIVNEMFSKGCI--------PDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNT 478

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V++  L+ G  K GN   A E++ +        +A  Y  L+  + R+G+ ++A   +  
Sbjct: 479 VSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVRE 538

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           MI+ G  P       +++SL ++ +V  A R M+  +  G   N+     ++     +  
Sbjct: 539 MIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDD 598

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +E AL  +D M  S   P+   + +++  L +KG+   A KL    L    I    +Y  
Sbjct: 599 LEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRT 658

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           V+      G+  +   +L K++ +       + +++I  L   GN +QA  +L +++R
Sbjct: 659 VIHQYCRMGRVEDLLKLLEKMLSRQECR--TAYNQVIEKLCSFGNLEQAYKLLGKVLR 714



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 130/552 (23%), Positives = 241/552 (43%), Gaps = 35/552 (6%)

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G+   A R    M   GIEP     N  +    +  +L+ A+RF E M+   I  +V+
Sbjct: 244 RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVI 303

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE- 256
           TYN +I GY    ++++A +L AEM  K   P  ISY T++ G++  E+    +R+  E 
Sbjct: 304 TYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVM-GFLCKEKRIKEVRLLMEK 362

Query: 257 -MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
            +K  ++ P+ VTY   +  L   G   E  + LRE  ER     D   +  ++   C+ 
Sbjct: 363 MLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRF-RVDKVGYSAIVHSFCRE 421

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK----------------- 358
           G ++ A +++  M       +   Y  +I   C+    D+A K                 
Sbjct: 422 GRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 481

Query: 359 --LLDKLVEKEIILRPQSTLDM--------EASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
             LL+ L +    L  +  ++M         A +Y+ ++      G++ +A    R+++K
Sbjct: 482 TALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 541

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KG    PV  N LI+   +E   D A   ++     G   +   +  +I  + +K +   
Sbjct: 542 KGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEA 601

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A + LD M      P    + +++++L + GR++ A+++   M+  G+         ++ 
Sbjct: 602 ALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIH 661

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN-FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
                G VE+ L  ++ M+        ++ ++  L   G    A KLL   L     ID 
Sbjct: 662 QYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDA 721

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD--ILS 644
            +   ++++ L+ G  L +Y++  ++  +  + D K  +K+   L  EG +++AD  IL 
Sbjct: 722 NTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILR 781

Query: 645 RMIRGEMSRGSQ 656
            + RG +S   Q
Sbjct: 782 FVERGRISPQCQ 793


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 136/564 (24%), Positives = 243/564 (43%), Gaps = 50/564 (8%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L+ + DH LV  V+         +QFFRW  +   + HD  T++ +I  
Sbjct: 40  WGPDAEKALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIHC 99

Query: 66  LGRVGKLNHARCILLDMPKK--GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
           L  V +      ++ +M +    V    ++ +V +   G   +V++++ IF  +K    +
Sbjct: 100 LEVVEQYGEMWKMIQEMVRNPICVVTPTELSDV-VRMLGNAKMVRQAITIFYQIKTRKCQ 158

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG--------------------------- 156
              ++Y+++  +++  G+Y    + +N+M +EG                           
Sbjct: 159 PIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQ 218

Query: 157 ---------IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
                    ++PT   Y +++  FF       A+  FE+M+ +    DV TY  +I G  
Sbjct: 219 LLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLG 278

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           +  ++DEA   F EM+ +   P  +    MI       R DDA+++F EM++    P+ V
Sbjct: 279 KAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVV 338

Query: 268 TYTALLPGLCDA-GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           TY  ++  L ++  +  EV      M E  I P   +  + + G  CK+  +  A  +L+
Sbjct: 339 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGF-CKTNRMEKAMMLLE 397

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M     P     Y  LI+   KA+ YD A +L  +L E        +     A  Y  M
Sbjct: 398 EMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE--------NCGSSSARVYAVM 449

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I+HL   G+   A   F ++ K G   D  A+N L+ G ++ G  D A   ++ M   G 
Sbjct: 450 IKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGC 509

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D ++Y  ++    + G P  A   L +M +    P    + +V+ +L   G  + AS+
Sbjct: 510 IPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASK 569

Query: 506 VMKSMVEKGVKENLDLVAKILEAL 529
           +MK M   G + +L   + ILEA+
Sbjct: 570 LMKEMNTLGFEYDLITYSSILEAI 593



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 205/465 (44%), Gaps = 20/465 (4%)

Query: 1   MAERAWTTRLQNKIRALVP--QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRET 58
           M  +A T   Q K R   P  Q  ++++  ++H  +  E   Q +  +   G    D  T
Sbjct: 141 MVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQ-YEKVHQLYNEMSTEGHCFPDTVT 199

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I    ++G+ + A  +L +M + G+Q    ++ +LI  + K      ++ +F+ M+
Sbjct: 200 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 259

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
                  V +Y  L + + + GR   A  +F +M  EG  P     N M+     + +L+
Sbjct: 260 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 319

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMING-YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            A++ F++M++      VVTYNT+I   +    +  E    F  MKE  I P+  +Y+ +
Sbjct: 320 DAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 379

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY- 296
           I G+    R + A+ + +EM      P    Y +L+  L  A +     ++ +E+ E   
Sbjct: 380 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 439

Query: 297 -IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
               +  +V +K LG   K+G L+ A ++   M +L    +   Y  L+    +  M D 
Sbjct: 440 SSSARVYAVMIKHLG---KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDE 496

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP- 414
           A+  + ++ E   I         + +SYN ++  L   G   +A       MK+  + P 
Sbjct: 497 ALSTMRRMQEHGCIP--------DINSYNIILNGLAKTGGPHRAMEMLSN-MKQSTVRPD 547

Query: 415 -VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
            V++N ++   S  G  + A +++K M   G   D   Y  ++E+
Sbjct: 548 VVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEA 592



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 111/500 (22%), Positives = 204/500 (40%), Gaps = 55/500 (11%)

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI---EPTVISYTTMIKGYVAV 244
           K R    D  TY  +I+     ++  E  K+  EM    I    PT +S    + G   +
Sbjct: 82  KRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKM 141

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNS 303
            R   A+ IF ++K+   +P A  Y +++  L   G+  +V ++  EM  E +  P D  
Sbjct: 142 VR--QAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFP-DTV 198

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  L+   CK G  ++A  +L  M  + +      Y +LI  F K      A+ L +++
Sbjct: 199 TYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEM 258

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIR 422
             +    RP      +  +Y  +I+ L   G+  +A  FF ++ ++G   D V  NN+I 
Sbjct: 259 --RHQYCRP------DVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMIN 310

Query: 423 GHSKEGNPDSAFE-------------------IVKI-----------------MGRRGVP 446
              K G  D A +                   I+K                  M   G+ 
Sbjct: 311 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 370

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
             +  Y  LI+ + +      A   L+ M E G  P  + + S++++L +  R   A  +
Sbjct: 371 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 430

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
            + + E     +  + A +++ L   G +++A+   D M + G  P+   +++L+S L+ 
Sbjct: 431 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 490

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G    A+  +       CI D+ SY  +L+ L   G    A  +L  + +     D  S
Sbjct: 491 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 550

Query: 624 SDKLIAGLNQEGNTKQADIL 643
            + ++  L+  G  ++A  L
Sbjct: 551 YNTVLGALSHAGMFEEASKL 570


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 140/603 (23%), Positives = 268/603 (44%), Gaps = 13/603 (2%)

Query: 3   ERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKM 62
           ER+  +    ++  L  + D  +V  V+ G  +SE A++F+ W E    F+H +     +
Sbjct: 70  ERSMCSEPLVELERLDVELDPIVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAYL 129

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           + +L   G        L  +  +GV     ++ +L+  Y + G     ++ FD M   G 
Sbjct: 130 VSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGC 189

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
                 Y+    ++++   + + ++Y++  L++G   T  TY+  +     S ++E    
Sbjct: 190 REFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQE 249

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
              DM   G S D+   N  I    +  ++ +A ++  +M+ K   P V++Y T++ G  
Sbjct: 250 LLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLC 309

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
             ++  +A+ +++EM   D+KP+  +  AL+ GLC   K+ E  ++   M+   I     
Sbjct: 310 DNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDI-ELSV 368

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
            ++  L+    ++G ++ A  ++  M       +   Y IL+ ++C   M ++A KL+ K
Sbjct: 369 CIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRK 428

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLI 421
           +          S ++ +  SYN +++ LC   Q  KA  F    M+  G  D V+ N LI
Sbjct: 429 M--------ETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILI 480

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
               K     SA E+ K MG +G+  DA  Y  LI      G    A+   + M+     
Sbjct: 481 DAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQID 540

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P  +L+  ++  L + G  + A  +   M++K V  +      ++  L  R    EAL  
Sbjct: 541 PNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNL 600

Query: 542 IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
              M   G  P+   F  L+S L ++GK+  A ++ ++ +    I+D    E+++  L +
Sbjct: 601 FKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVLKS 660

Query: 599 AGK 601
             K
Sbjct: 661 KNK 663



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 85/426 (19%), Positives = 154/426 (36%), Gaps = 54/426 (12%)

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM--KLLGVQC 313
           E++  DV+ + +    ++ GL D+   V              P  D+S F    L+ +  
Sbjct: 80  ELERLDVELDPIVVNLVVRGLSDSETAVRFYWWAESR-----PGFDHSQFAIAYLVSLLF 134

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
             G+    ++ L  +    +      Y IL+  + +A  +D  I+  D++V         
Sbjct: 135 MDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMV--------M 186

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDS 432
           S        YN  I  L  N      E ++   + KG  L P  ++  I    +    + 
Sbjct: 187 SGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIEL 246

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
             E++  M + G   D  A    I    ++    DA   ++ M   G SP    +++V+ 
Sbjct: 247 VQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVS 306

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--- 549
            L ++ +   A  + + MV++ +K ++     ++  L     V+EA      M+      
Sbjct: 307 GLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIEL 366

Query: 550 SVPNFDSLLSVLSEKGKTIAAVKLLDF-----C----------LGRDCII---------- 584
           SV  +++L+S     G    A K++ F     C          L   C I          
Sbjct: 367 SVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLI 426

Query: 585 ----------DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                     D  SY ++L  L    +   A++ +   ME GG  D  S + LI    + 
Sbjct: 427 RKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKT 486

Query: 635 GNTKQA 640
              K A
Sbjct: 487 KKVKSA 492


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 220/487 (45%), Gaps = 11/487 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L +   ++ A  +L  M + G + +   +  LI  Y   G+  ESV++F
Sbjct: 259 DLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 318

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   GV  +V + ++    + + GR   AK  F+ M+ +G +P   +Y+ ML G+  +
Sbjct: 319 KQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATA 378

Query: 175 LK--LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
               L      F  M ++GI+ +   +N +IN Y R   MD+A  +F +M+ K + P  +
Sbjct: 379 TDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTV 438

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           ++ T+I     + R DDAL  F+ M    V P+   Y  L+ G C+ G++V+ ++++ EM
Sbjct: 439 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 498

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           + + IPP     F  ++   CK G +    D++  M++         +  L+E +C    
Sbjct: 499 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 558

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            + A  LLD +    I + P   +      Y  ++   C NG+   A   FR ++ KGV 
Sbjct: 559 MEEAFALLDAMAS--IGIEPNCYI------YGTLVDGYCKNGRIDDALTVFRDMLHKGVK 610

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
              V ++ ++ G  +     +A ++   M   G       Y  ++    R     +A   
Sbjct: 611 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 670

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           L+ +           F  V+ ++F+ GR Q A  +  ++   G+  N+   + ++  L+ 
Sbjct: 671 LEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 730

Query: 532 RGHVEEA 538
               EEA
Sbjct: 731 EESYEEA 737



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 146/615 (23%), Positives = 277/615 (45%), Gaps = 20/615 (3%)

Query: 39  ALQFFRWVERAGLFNHDR---ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           A++ F+ ++R     H      T+  +I+   RV + +    I+  + K G+  D D   
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPD-DFSY 194

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI  + K G V ++  +F  M + GV   +   +++ K + +      A+    KM+  
Sbjct: 195 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           GI P   TY++++ G   S  ++ A R  E M   G   + +TYN++I+GY+     +E+
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            ++F +M    + PTV +  + I       R ++A  IFD M     KP+ ++Y+ +L G
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 374

Query: 276 LCDA--GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
              A    + +V  +   M+ + I P +  VF  L+    + G ++ A  + + M    +
Sbjct: 375 YATATDSCLADVHNIFNLMLTKGIAP-NKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 433

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   +  +I + C+    D A+   + +V  +I + P   +      Y  +IQ  C++
Sbjct: 434 IPDTVTFATVISSLCRIGRLDDALHKFNHMV--DIGVPPSEAV------YGCLIQGCCNH 485

Query: 394 GQTGKAEIFFRQLMKKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           G+  KA+    ++M K +  P    F+++I    KEG      +I+ +M + G   +   
Sbjct: 486 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 545

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +  L+E Y   G   +A   LD+M   G  P   ++ ++++   ++GR+  A  V + M+
Sbjct: 546 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 605

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTI 568
            KGVK    L + IL  L        A      M++SG   S+  +  +L  L     T 
Sbjct: 606 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTD 665

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A  LL+     +   D+ ++  V+ A+   G+   A  +   I   G V + ++   +I
Sbjct: 666 EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 725

Query: 629 AGLNQEGNTKQADIL 643
             L +E + ++AD L
Sbjct: 726 TNLIKEESYEEADNL 740



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 92/186 (49%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VG +  A  +L  M   G++ +  ++  L++ Y K G + +++ +F  M   GV+ +   
Sbjct: 556 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 615

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  +   + +  R   AK+ F++M+  G   + HTY V+L G   +   + A    E + 
Sbjct: 616 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 675

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  +  D++T+N +I+   +  +  EA++LF  +    + P + +Y+ MI   +  E  +
Sbjct: 676 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 735

Query: 249 DALRIF 254
           +A  +F
Sbjct: 736 EADNLF 741


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 219/476 (46%), Gaps = 36/476 (7%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L R G++  A  +L  M + G+Q ++  +  +++   K G   ++V   +++
Sbjct: 181 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG---DTVSALNLL 237

Query: 118 KQLGVERSVKSYDALFKL---------ILRRGRYMMAKRYFNKMLS-EGIEPTRHTYNVM 167
           +++     +K    ++ L             GR+  A++   +ML  + I P   TYN +
Sbjct: 238 RKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNAL 297

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           +  F    K   A   +++M  RGI    +TY++MI+G+ +  ++D AE +F  M  K  
Sbjct: 298 INAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 357

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P +I++ T+I GY   +R DD +++  EM    +  N +TYT L+ G C  G +   Q 
Sbjct: 358 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQD 417

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH-------- 339
           +L+EMV   + P   +    L G+ C +G L  A ++ KAM +  +  +A H        
Sbjct: 418 LLQEMVSSGVCPNVVTCNTLLDGL-CDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPD 476

Query: 340 ---YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y ILI        +  A +L +++  + I+  P +       +YN +I  LC   + 
Sbjct: 477 VQTYNILISGLINEGKFLEAEELYEEMPHRGIV--PDTI------TYNSVIHGLCKQSRL 528

Query: 397 GKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
            +A   F  +  K    P  V F  LI G+ K G  D   E+   MGRRG+  +A  YI 
Sbjct: 529 DEATQMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 587

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           LI  + + G    A      M+  G  P +   R+++  L+    ++ A  +++ +
Sbjct: 588 LIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 218/509 (42%), Gaps = 55/509 (10%)

Query: 72  LNHARCI------LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L H  C+       LD+  +  + +   F  L+    ++G V E+V + D M + G++ +
Sbjct: 154 LLHGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPN 213

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY-NVMLW----------GFFLS 174
             +Y  +   + + G  + A     KM     E   H   NV++W          GF  S
Sbjct: 214 QITYGTIVDGMCKMGDTVSALNLLRKM-----EEVSHIKPNVVIWPLERRTCMINGFCSS 268

Query: 175 LKLETAIRFFEDMKSRG-ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
            +   A +  ++M  R  IS DVVTYN +IN + +  K  EAE+L+ EM  + I P+ I+
Sbjct: 269 GRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTIT 328

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y++MI G+    R D A  +F  M +    P+ +T+  L+ G C A ++ +  K+L EM 
Sbjct: 329 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 388

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           E  +   +   +  L+   C+ G LNAA D+L+ M+   +         L++  C     
Sbjct: 389 EAGLV-ANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKL 447

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
             A+++   +         +S +D++AS  +P       NG     +             
Sbjct: 448 KDALEMFKAM--------QKSKMDIDAS--HPF------NGVEPDVQ------------- 478

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              +N LI G   EG    A E+ + M  RG+  D   Y  +I    ++    +A    D
Sbjct: 479 --TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFD 536

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           SM     SP    F +++    + GRV     +   M  +G+  N      ++      G
Sbjct: 537 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVG 596

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
           ++  AL     MM SG  P+  ++ ++L+
Sbjct: 597 NINGALDIFQEMMASGVYPDTITIRNMLT 625



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/483 (22%), Positives = 213/483 (44%), Gaps = 37/483 (7%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +L+  I     M+ R +  +  ++  ++  +    K+  A   F ++ +    PTV++++
Sbjct: 93  RLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFS 152

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           T++ G    +R  +AL +F +M     KPN VT+T L+ GLC  G++VE   +L  M+E 
Sbjct: 153 TLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLED 208

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS--------IPTEAGHYGILIENF 347
            + P +   +  ++   CK G   +A ++L+ M  +S         P E      +I  F
Sbjct: 209 GLQP-NQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLE--RRTCMINGF 265

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           C +  +  A +LL +++E++ I         +  +YN +I      G+  +AE  + +++
Sbjct: 266 CSSGRWSEAQQLLQEMLERKKI-------SPDVVTYNALINAFVKEGKFFEAEELYDEML 318

Query: 408 KKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
            +G++   + ++++I G  K+   D+A  +  +M  +G   D   +  LI  Y R     
Sbjct: 319 PRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVD 378

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           D    L  M E G    +  + +++    + G +  A  +++ MV  GV  N+     +L
Sbjct: 379 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLL 438

Query: 527 EALLMRGHVEEALGRIDLMMQS--------------GSVPNFDSLLSVLSEKGKTIAAVK 572
           + L   G +++AL     M +S                V  ++ L+S L  +GK + A +
Sbjct: 439 DGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 498

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           L +    R  + D  +Y  V+  L    +   A  +   +  K    +  +   LI G  
Sbjct: 499 LYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 558

Query: 633 QEG 635
           + G
Sbjct: 559 KAG 561



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/541 (21%), Positives = 222/541 (41%), Gaps = 67/541 (12%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           S+  L K      +   A   F K+   G  PT  T++ +L G  +  ++  A+  F  M
Sbjct: 115 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
                  +VVT+ T++NG  R  ++ EA  L   M E  ++P  I+Y T++ G   +   
Sbjct: 175 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 230

Query: 248 DDALRIFDEMKSFD-VKPNAVTY-----TALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             AL +  +M+    +KPN V +     T ++ G C +G+  E Q++L+EM+ER     D
Sbjct: 231 VSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPD 290

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+    K G    A ++   M+   I      Y  +I+ FCK    D A     
Sbjct: 291 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAA----- 345

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
                                     +H+           F+    K    D + FN LI
Sbjct: 346 --------------------------EHM-----------FYLMATKGCSPDIITFNTLI 368

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G+ +    D   +++  M   G+  +   Y  LI  + + G+   A+  L  M+  G  
Sbjct: 369 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC 428

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVE-----------KGVKENLDLVAKILEALL 530
           P      ++++ L ++G+++ A  + K+M +            GV+ ++     ++  L+
Sbjct: 429 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLI 488

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G   EA    + M   G VP+   ++S++  L ++ +   A ++ D    +    ++ 
Sbjct: 489 NEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVV 548

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           ++  +++    AG+  +   +  ++  +G V +  +   LI G  + GN   A DI   M
Sbjct: 549 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEM 608

Query: 647 I 647
           +
Sbjct: 609 M 609



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 132/255 (51%), Gaps = 12/255 (4%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           AK  +  ++    +  AGL   +  T+  +I    +VG LN A+ +L +M   GV  +  
Sbjct: 374 AKRVDDGIKLLHEMTEAGLV-ANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVV 432

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQL-----------GVERSVKSYDALFKLILRRGR 141
               L++     G +++++++F  M++            GVE  V++Y+ L   ++  G+
Sbjct: 433 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGK 492

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           ++ A+  + +M   GI P   TYN ++ G     +L+ A + F+ M S+  S +VVT+ T
Sbjct: 493 FLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 552

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +INGY +  ++D+  +LF EM  + I    I+Y T+I G+  V   + AL IF EM +  
Sbjct: 553 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASG 612

Query: 262 VKPNAVTYTALLPGL 276
           V P+ +T   +L GL
Sbjct: 613 VYPDTITIRNMLTGL 627



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/489 (23%), Positives = 205/489 (41%), Gaps = 27/489 (5%)

Query: 170 GFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
           GF     LE AI  F DM +SR +   V+ +  ++    R  ++D    L  +M+ + + 
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLP-SVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVP 110

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
               S+T ++K + +  +   AL  F ++      P  VT++ LL GLC   ++ E   +
Sbjct: 111 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDL 170

Query: 289 LREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
             +M       K N V F  L+   C+ G +  A  +L  M+   +      YG +++  
Sbjct: 171 FHQMC------KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           CK      A+ LL K+ E   I +P   +         MI   C +G+  +A+   ++++
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHI-KPNVVI-WPLERRTCMINGFCSSGRWSEAQQLLQEML 282

Query: 408 KKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           ++  + P  V +N LI    KEG    A E+   M  RG+      Y  +I+ + ++   
Sbjct: 283 ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL 342

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A+     M   G SP    F +++       RV    +++  M E G+  N      +
Sbjct: 343 DAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 402

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           +      G +  A   +  M+ SG  PN    ++LL  L + GK   A+++         
Sbjct: 403 IHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 462

Query: 583 II-----------DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            I           D+ +Y  ++  L+  GK L A  +  ++  +G V D  + + +I GL
Sbjct: 463 DIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGL 522

Query: 632 NQEGNTKQA 640
            ++    +A
Sbjct: 523 CKQSRLDEA 531



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 151/375 (40%), Gaps = 56/375 (14%)

Query: 44  RWVERAGLFNH---------DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           RW E   L            D  T+  +I    + GK   A  +  +M  +G+      +
Sbjct: 270 RWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITY 329

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             +I+ + K+  +  +  +F +M   G    + +++ L     R  R     +  ++M  
Sbjct: 330 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 389

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING--------- 205
            G+     TY  ++ GF     L  A    ++M S G+  +VVT NT+++G         
Sbjct: 390 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKD 449

Query: 206 -YNRFK-----KMD-------------------------------EAEKLFAEMKEKNIE 228
               FK     KMD                               EAE+L+ EM  + I 
Sbjct: 450 ALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 509

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P  I+Y ++I G     R D+A ++FD M S    PN VT+T L+ G C AG++ +  ++
Sbjct: 510 PDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 569

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             EM  R I     +    + G + K G++N A D+ + M+   +  +      ++    
Sbjct: 570 FCEMGRRGIVANAITYITLIHGFR-KVGNINGALDIFQEMMASGVYPDTITIRNMLTGLW 628

Query: 349 KAEMYDRAIKLLDKL 363
             E   RA+ +L+ L
Sbjct: 629 SKEELKRAVAMLEDL 643


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 215/444 (48%), Gaps = 46/444 (10%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A  F   V   G F+ D+ ++  +I  L +VG+   A  +L  +    VQ +  M+  
Sbjct: 172 QQAFLFHDKVVALG-FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I+S  K  +V E+  +F  M   G+   V +Y AL       G+   A   FNKM+ E 
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I+P  +T+N+++  F    K++     F+ M  +GI  + VTYN++++GY   K++++A+
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +F  M +  + P + SY+ MI G+  +++ D+A+ +F EM   ++ P+ VTY++L+ GL
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
             +G++    +++ +M +R +PP                                +I T 
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPP--------------------------------NICT- 437

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  +++  CK    D+AI LL K  +K    +P      + S+Y+ +I+ LC +G+ 
Sbjct: 438 ---YNSILDALCKTHQVDKAIALLTKFKDKG--FQP------DISTYSILIKGLCQSGKL 486

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A   F  L+ KG  LD  A+  +I+G   EG  + A  ++  M   G   DA  Y  +
Sbjct: 487 EDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 456 IESYLRKGEPADAKTALDSMIEDG 479
           I S  +K E   A+  L  MI  G
Sbjct: 547 ILSLFKKDENDMAEKLLREMIARG 570



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 229/492 (46%), Gaps = 32/492 (6%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G++ ++ + + L     + G    A   F K+L  G  P   T+  +  G  L  +++ A
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA 174

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
             F + + + G   D ++Y T+I+G  +  +   A  L   +    ++P V+ Y T+I  
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              V+  ++A  +F EM S  + P+ VTY+AL+ G C  GK+ +   +  +M+   I P 
Sbjct: 235 MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKP- 293

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  L+   CK G +     V   M++  I      Y  L++ +C  +  ++A  + 
Sbjct: 294 DVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIF 353

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + +         Q  ++ +  SY+ MI   C   +  +A   F+++ +K ++ D V +++
Sbjct: 354 NTMA--------QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED- 478
           LI G SK G    A ++V  M  RGVP +   Y  ++++ L K    D   AL +  +D 
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDA-LCKTHQVDKAIALLTKFKDK 464

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK--ILEALLMRGHVE 536
           G  P  S +  +++ L + G+++ A +V + ++ KG   NLD+ A   +++   + G   
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY--NLDVYAYTIMIQGFCVEGLFN 522

Query: 537 EALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
           EAL  +  M  +G +P+            KT   + L  F    +   D+A  EK+L  +
Sbjct: 523 EALALLSKMEDNGCIPD-----------AKTYEIIILSLFKKDEN---DMA--EKLLREM 566

Query: 597 LAAGKTLNAYSI 608
           +A G  LN Y +
Sbjct: 567 IARGLPLNFYDL 578



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 227/502 (45%), Gaps = 11/502 (2%)

Query: 19  PQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           P F+ N +   L  +K+    L   + +E  G+  +    ++ +I    ++G +  A  +
Sbjct: 84  PAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI-LINCFCQLGLIPFAFSV 142

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
              + K G   D   F  L +    KG +Q++    D +  LG      SY  L   + +
Sbjct: 143 FAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G    A     ++    ++P    YN ++        +  A   F +M S+GIS DVVT
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVT 262

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y+ +I+G+    K+ +A  LF +M  +NI+P V ++  ++  +    +  +   +FD M 
Sbjct: 263 YSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
              +KPN VTY +L+ G C   ++ + + +   M +  + P   S  + + G  CK    
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF-CKIKKF 381

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A ++ K M R +I  +   Y  LI+   K+     A++L+D++ ++ +   P +    
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV---PPNI--- 435

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
              +YN ++  LC   Q  KA     +   KG   D   ++ LI+G  + G  + A ++ 
Sbjct: 436 --CTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVF 493

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           + +  +G   D  AY  +I+ +  +G   +A   L  M ++G  P +  +  ++ SLF+ 
Sbjct: 494 EDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553

Query: 498 GRVQTASRVMKSMVEKGVKENL 519
                A ++++ M+ +G+  N 
Sbjct: 554 DENDMAEKLLREMIARGLPLNF 575



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 115/514 (22%), Positives = 233/514 (45%), Gaps = 16/514 (3%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   FN++L     P    +N +L     S    T +   + M+ RGI  ++V  N +IN
Sbjct: 69  AVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 128

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            + +   +  A  +FA++ +    P  I++TT+ KG     +   A    D++ +     
Sbjct: 129 CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHF 188

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + ++Y  L+ GLC  G+      +L+ +    + P +  ++  ++   CK   +N A D+
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP-NVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              M+   I  +   Y  LI  FC       AI L +K++ + I  +P      +  ++N
Sbjct: 248 FSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI--KP------DVYTFN 299

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            ++   C +G+  + +  F  +MK+G+  + V +N+L+ G+      + A  I   M + 
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           GV  D  +Y  +I  + +  +  +A      M      P    + S+++ L + GR+  A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSV 560
            +++  M ++GV  N+     IL+AL     V++A+  +      G  P+  +   L+  
Sbjct: 420 LQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L + GK   A K+ +  L +   +D+ +Y  ++      G    A ++L K+ + G + D
Sbjct: 480 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539

Query: 621 WKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
            K+ + +I  L ++    + D+  +++R  ++RG
Sbjct: 540 AKTYEIIILSLFKK---DENDMAEKLLREMIARG 570



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/456 (22%), Positives = 192/456 (42%), Gaps = 23/456 (5%)

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           ++ ++Y++    ++    +D+A  LF  +  +N  P    +  ++   V  +     L +
Sbjct: 48  INFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYL 107

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQ 312
             +M+   +KPN V    L+   C  G +     V  ++++  Y+P  D   F  L    
Sbjct: 108 SQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVP--DTITFTTLSKGL 165

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK----LVEKEI 368
           C  G +  A      ++ L    +   YG LI   CK      A+ LL +    LV+  +
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           ++            YN +I  +C      +A   F +++ KG+  D V ++ LI G    
Sbjct: 226 VM------------YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCIL 273

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G    A ++   M    +  D   +  L+ ++ + G+  + KT  D M++ G  P    +
Sbjct: 274 GKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTY 333

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            S+M+       V  A  +  +M + GV  ++   + ++         +EA+     M +
Sbjct: 334 NSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR 393

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
              +P+   + SL+  LS+ G+   A++L+D    R    ++ +Y  +LDAL    +   
Sbjct: 394 KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDK 453

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           A ++L K  +KG   D  +   LI GL Q G  + A
Sbjct: 454 AIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDA 489


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 213/455 (46%), Gaps = 13/455 (2%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  M   GV+ D   +  LI        V  +V++ + M + G+E +V  Y  L     
Sbjct: 116 LLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYC 175

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR+    + F +M   GIEP    Y  ++       K++ A R  + M  RG+  +VV
Sbjct: 176 KTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVV 235

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN +IN   +   + EA  L   M EK ++P V++Y T+I G  +V   D+A+ + +EM
Sbjct: 236 TYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM 295

Query: 258 KSFD--VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCK 314
              +  V+P+ +T+ +++ GLC  G M +  +V   M E     + N V F  L+G   +
Sbjct: 296 MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGC--RCNLVAFNLLIGGLLR 353

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              +  A +++  M    +  ++  Y ILI  FCK    +RA   L +       +R Q 
Sbjct: 354 VHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSE-------MRHQG 406

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAF 434
            ++ E   Y P+++ +C  G  G+A   F ++ +   LD  A++ +I G  K G    A 
Sbjct: 407 -MEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAE 465

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           E +K M   G+  DA  Y   I  + + G+ A A+  L  M   G  P  ++F S+++  
Sbjct: 466 EFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGY 525

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              G  +    + + M  K V  +  +++ I+ +L
Sbjct: 526 GAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 205/487 (42%), Gaps = 39/487 (8%)

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN---IEPTVISYTTMIKGYVAVERADDAL 251
           D V+YNT++    R   +D A  L   M  +      P  ISYTT+++   A  RA  A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            +   M+   V+P+ VTY  L+ GLCDA  +    ++L EM E  I P +  V+  LL  
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEP-NVVVYSCLLHG 173

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK+G   +   V + M    I  +   Y  LI++ C+     +A +++D + E+     
Sbjct: 174 YCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTER----- 228

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNP 430
               L+    +YN +I  +C  G   +A    + + +KGV  D V +N LI G S     
Sbjct: 229 ---GLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEM 285

Query: 431 DSAFEIVKIM--GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           D A  +++ M  G   V  D   +  +I    + G    A      M E+G       F 
Sbjct: 286 DEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFN 345

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            ++  L    +V+ A  +M  M   G++ +    + ++        VE A   +  M   
Sbjct: 346 LLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQ 405

Query: 549 GSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
           G  P   ++  LL  + ++G    A  L +  + R+C +D A+Y  ++     +G+   A
Sbjct: 406 GMEPEPVHYIPLLKAMCDQGMMGQARDLFNE-MDRNCKLDAAAYSTMIHGAFKSGEKKIA 464

Query: 606 ------------------YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
                             YSI   +  K G  D  ++++++  +   G      +   +I
Sbjct: 465 EEFLKDMIDEGLIPDAVTYSIPINMFAKSG--DLAAAERVLKQMTASGFVPDVAVFDSLI 522

Query: 648 RGEMSRG 654
           +G  ++G
Sbjct: 523 QGYGAKG 529



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 11/249 (4%)

Query: 411 VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR-----DADAYICLIESYLRKGEP 465
           V D V++N ++    ++G  D+A  ++++M     PR     +A +Y  L+ +       
Sbjct: 53  VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHE--PRLASRPNAISYTTLMRALCADRRA 110

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
           A A   L SM + G  P    + +++  L +   V TA  ++  M E G++ N+ + + +
Sbjct: 111 AQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCL 170

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           L      G  E      + M   G  P+   + +L+  L   GK   A +++D    R  
Sbjct: 171 LHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGL 230

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-D 641
             ++ +Y  +++++   G    A  +   + EKG   D  + + LI GL+      +A  
Sbjct: 231 EPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMA 290

Query: 642 ILSRMIRGE 650
           +L  M++GE
Sbjct: 291 LLEEMMQGE 299


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 199/450 (44%), Gaps = 12/450 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + G L  A  +  +    G   D   +  +++   K   +QE+V + + +   G
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              ++ +Y+AL   + + GR   A     K++  G  P   TY  ++ G     +   A 
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F++M SRG++LD V Y  +I G  +  K+ +A  ++  M  +   P V++ +TMI G 
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R   A+RIF  M++  + PN V Y+AL+ GLC A KM    ++L +M + +  P D
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP-D 243

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CKSG + AA      M+      +   Y ILI  FCKA   D A  + D
Sbjct: 244 TITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFD 303

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
            +          S       +Y  +I  LC   Q  KA ++++ + ++G   D   +++L
Sbjct: 304 DM--------SSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSL 355

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G  K G  +    +   M R GV         +   +L K    D   +L + I    
Sbjct: 356 VDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIF--HLCKANRVDEAVSLFNAIRKEG 413

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            P    + S++ +L + G+V     V + M
Sbjct: 414 MPHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 207/443 (46%), Gaps = 15/443 (3%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           ++  L   +++ G  + A     +  + G     HTY  ++     + K++ A+   E +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            + G +  + TYN ++NG  +  +++EA  L  ++ +    P V++YT++I G    +R+
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +A ++F EM S  +  + V YTAL+ GL  AGK+ +   V + M  +   P D      
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP-DVVTLST 179

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++   CK+G + AA  + K+M    +      Y  LI   CKA   D A+++L ++  K+
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM--KK 237

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
               P +       +YN +I  LC +G    A  FF ++++ G   D   +N LI G  K
Sbjct: 238 AFCTPDTI------TYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCK 291

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            GN D+A  +   M       +   Y  LI    ++ +   A      M E G  P S +
Sbjct: 292 AGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFV 351

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           + S+++ L + G+++    +   M   GV  N     +++  L     V+EA+   + + 
Sbjct: 352 YSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIR 410

Query: 547 QSGSVPN---FDSLLSVLSEKGK 566
           + G +P+   ++S++S L + GK
Sbjct: 411 KEG-MPHPYAYNSIISALIKSGK 432



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 12/384 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L      E A+   R +   G    D  T+  +I+ LG+  +   A  +  +M
Sbjct: 72  YNALLNGLCKMGRLEEAIDLLRKIVDNGC-TPDVVTYTSLIDGLGKKKRSFEAYKLFKEM 130

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  D   +  LI    + G + ++  ++  M   G    V +   +   + + GR 
Sbjct: 131 ASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 190

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R F  M + G+ P    Y+ ++ G   + K++ A+     MK    + D +TYN +
Sbjct: 191 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 250

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +   +  A   F EM E   +P V +Y  +I G+      D A  +FD+M S   
Sbjct: 251 IDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 310

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN VTY  L+ GLC   ++ +     + M ER  PP D+ V+  L+   CKSG L    
Sbjct: 311 SPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPP-DSFVYSSLVDGLCKSGKLEGGC 369

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   M R  +         LI + CKA   D A+ L +  + KE +  P         +
Sbjct: 370 MLFDEMERSGVANSQTRTR-LIFHLCKANRVDEAVSLFNA-IRKEGMPHPY--------A 419

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQL 406
           YN +I  L  +G+  + +  ++++
Sbjct: 420 YNSIISALIKSGKVNEGQAVYQEM 443



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 169/371 (45%), Gaps = 10/371 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L ++G+L  A  +L  +   G   D   +  LI+  GKK    E+ K+F  M
Sbjct: 71  TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEM 130

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+      Y AL + +L+ G+   A   +  M S+G  P   T + M+ G   + ++
Sbjct: 131 ASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 190

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+R F+ M++RG++ + V Y+ +I+G  + +KMD A ++ A+MK+    P  I+Y  +
Sbjct: 191 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 250

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G         A   FDEM     KP+  TY  L+ G C AG       V  +M     
Sbjct: 251 IDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 310

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +   +  L+   CK   L  A+   + M     P ++  Y  L++  CK+   +   
Sbjct: 311 SP-NVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC 369

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
            L D++ E+  +   Q+           +I HLC   +  +A   F  + K+G+  P A+
Sbjct: 370 MLFDEM-ERSGVANSQTR--------TRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAY 420

Query: 418 NNLIRGHSKEG 428
           N++I    K G
Sbjct: 421 NSIISALIKSG 431



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 182/421 (43%), Gaps = 10/421 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +++ L +  K+  A  ++  +   G       +  L+    K G ++E++ + 
Sbjct: 33  DIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 92

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             +   G    V +Y +L   + ++ R   A + F +M S G+      Y  ++ G   +
Sbjct: 93  RKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQA 152

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K+  A   ++ M S+G   DVVT +TMI+G  +  ++  A ++F  M+ + + P  + Y
Sbjct: 153 GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 212

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I G     + D AL +  +MK     P+ +TY  L+ GLC +G +   +    EM+E
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P D   +  L+   CK+G+ +AA  V   M           YG LI   CK     
Sbjct: 273 AGCKP-DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLT 331

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
           +A      + E+     P S +      Y+ ++  LC +G+     + F ++ + GV + 
Sbjct: 332 KASLYYQHMKERGC--PPDSFV------YSSLVDGLCKSGKLEGGCMLFDEMERSGVANS 383

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
                LI    K    D A  +   + + G+P    AY  +I + ++ G+  + +     
Sbjct: 384 QTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISALIKSGKVNEGQAVYQE 442

Query: 475 M 475
           M
Sbjct: 443 M 443



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 181/457 (39%), Gaps = 49/457 (10%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           T++ +ING  +   + +A  L  E         + +YTT++      ++  +A+ + +++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            +    P   TY ALL GLC                                    K G 
Sbjct: 61  TANGCTPTIATYNALLNGLC------------------------------------KMGR 84

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           L  A D+L+ ++      +   Y  LI+   K +    A KL  ++  +         L 
Sbjct: 85  LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRG--------LA 136

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
           ++   Y  +I+ L   G+  +A   ++ +  +G + D V  + +I G  K G   +A  I
Sbjct: 137 LDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRI 196

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
            K M  RG+  +   Y  LI    +  +   A   L  M +   +P +  +  +++ L +
Sbjct: 197 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 256

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G V  A      M+E G K ++     ++      G+ + A G  D M  S   PN   
Sbjct: 257 SGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVT 316

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           + +L+S L ++ +   A         R C  D   Y  ++D L  +GK L    +LF  M
Sbjct: 317 YGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK-LEGGCMLFDEM 375

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           E+ GV + ++  +LI  L +     +A  L   IR E
Sbjct: 376 ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKE 412


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 203/430 (47%), Gaps = 12/430 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            LV+ +    K SE      R V +      D  T+  +I  L + G+ + A  +L  M 
Sbjct: 175 TLVHGLFQHNKASEAVALVERMVVKGC--QPDLVTYGAVINGLCKRGEPDLALNLLNKME 232

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K  ++ D  ++  +I+S  K   V +++ +F  M   G+   V +Y +L   +   GR+ 
Sbjct: 233 KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 292

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A R  + ML   I P   T+N ++  F    KL  A + F++M  R I  ++VTYN++I
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG+    ++DEA+++F  M  K+  P V++Y T+I G+   ++  D + +F +M    + 
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N VTYT L+ G   A      Q V ++MV   + P +   +  LL   CK+G L  A  
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP-NIMTYNTLLDGLCKNGKLEKAMV 471

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V + + +  +  +   Y I+ E  CKA   +    L   L  K +  +P      +  +Y
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV--KP------DVIAY 523

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N MI   C  G   +A   F ++ + G L D   +N LIR H ++G+  ++ E++K M  
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583

Query: 443 RGVPRDADAY 452
                DA  Y
Sbjct: 584 CRFAGDASTY 593



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 214/486 (44%), Gaps = 29/486 (5%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           +H+  T+  MI  L R  +L+ A  IL  M K G          L+  +     + E+V 
Sbjct: 97  SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + D M ++G +    ++  L   + +  +   A     +M+ +G +P   TY  ++ G  
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
              + + A+     M+   I  DVV Y+T+I+   +++ +D+A  LF EM  K I P V 
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y+++I       R  DA R+  +M    + PN VT+ +L+      GK++E +K+  EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           ++R I P +   +  L+   C    L+ A  +   M+      +   Y  LI  FCKA+ 
Sbjct: 337 IQRSIDP-NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDM-----EAS----------------------SYNP 385
               ++L   +  + ++    +   +     +AS                      +YN 
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455

Query: 386 MIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++  LC NG+  KA + F  L K K   D   +N +  G  K G  +  +++   +  +G
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           V  D  AY  +I  + +KG   +A T    M EDG  P S  + +++ +   DG    ++
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 575

Query: 505 RVMKSM 510
            ++K M
Sbjct: 576 ELIKEM 581



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 131/572 (22%), Positives = 245/572 (42%), Gaps = 58/572 (10%)

Query: 92  DMFEVLIESYGKKGIVQES--------VKIFDI-------MKQLGVERSVKSYDALFKLI 136
           D+F  +++S     IV+ S        +K FD+       M+ LGV  ++ +Y+ +   +
Sbjct: 51  DLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCL 110

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            RR +   A     KM+  G  P+  T N +L GF    ++  A+   + M   G   D 
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VT+ T+++G  +  K  EA  L   M  K  +P +++Y  +I G       D AL + ++
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M+   ++ + V Y+ ++  LC    + +   +  EM  + I P D   +  L+   C  G
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP-DVFTYSSLISCLCNYG 289

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
             + A+ +L  M+   I      +  LI+ F K      A KL D+++++ I        
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI-------- 341

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
           D    +YN +I   C + +  +A+  F  ++ K  L D V +N LI G  K        E
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           + + M RRG+  +   Y  LI  + +  +  +A+     M+ DG  P    + ++++ L 
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
           ++G+++ A  V + + +  ++ ++     + E +   G VE+                  
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW---------------- 505

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            L   LS KG     VK            D+ +Y  ++      G    AY++  K+ E 
Sbjct: 506 DLFCSLSLKG-----VK-----------PDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549

Query: 616 GGVTDWKSSDKLIAGLNQEGN-TKQADILSRM 646
           G + D  + + LI    ++G+    A+++  M
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 109/513 (21%), Positives = 207/513 (40%), Gaps = 52/513 (10%)

Query: 172 FLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
            L LKL+ A+  F +M KSR     +V ++ +++   + KK D       +M+   +   
Sbjct: 41  LLHLKLDEAVDLFGEMVKSRPFP-SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHN 99

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           + +Y  MI       +   AL I  +M      P+ VT  +LL G C   ++ E   ++ 
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159

Query: 291 EMVERYIPPKDNSVFMKLL----------------------GVQ-------------CKS 315
           +MVE    P D   F  L+                      G Q             CK 
Sbjct: 160 QMVEMGYQP-DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G  + A ++L  M +  I  +   Y  +I++ CK    D A+ L  ++  K I  RP   
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI--RP--- 273

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSA 433
              +  +Y+ +I  LC+ G+   A      ++++ + +P  V FN+LI   +KEG    A
Sbjct: 274 ---DVFTYSSLISCLCNYGRWSDASRLLSDMLERKI-NPNVVTFNSLIDAFAKEGKLIEA 329

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            ++   M +R +  +   Y  LI  +       +A+     M+     P    + +++  
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             +  +V     + + M  +G+  N      ++         + A      M+  G  PN
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              +++LL  L + GK   A+ + ++        D+ +Y  + + +  AGK  + + +  
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            +  KG   D  + + +I+G  ++G  ++A  L
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542



 Score = 40.4 bits (93), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)

Query: 25  LVYNVLHG--AKNS--EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN L     KN   E A+  F +++++ +   D  T+  M E + + GK+     +  
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM-EPDIYTYNIMSEGMCKAGKVEDGWDLFC 509

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            +  KGV+ D   +  +I  + KKG+ +E+  +F  MK+ G      +Y+ L +  LR G
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVM 167
               +     +M S        TY ++
Sbjct: 570 DKAASAELIKEMRSCRFAGDASTYGLV 596


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 144/630 (22%), Positives = 274/630 (43%), Gaps = 15/630 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+  +    A   + A +FF  ++  GL   D  T+  MI +L +  +L+ A  I   M
Sbjct: 271 YNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDV-TYTSMIGVLCKGNRLDEAVEIFEQM 329

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            +         +  +I  YG  G   E+  + +  K  G   SV +Y+ +   + ++GR 
Sbjct: 330 EQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRL 389

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R F +M  +   P   TYNV++     + ++E A +  + MK  G+  +V+T N M
Sbjct: 390 GEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIM 448

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+   + KK+DEA  +F  M  K   P  +++ ++I G     R DDA R++++M   D 
Sbjct: 449 IDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDK 508

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PNAV YT+L+      G+  +  K+ +EM+ R   P D  +    +    K+G      
Sbjct: 509 IPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSP-DLRLLNAYMDCVFKAGETGKGR 567

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            + + +       +   Y ILI    KA       +L   + E+  +L        +  +
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVL--------DTHA 619

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN  I   C +G+  KA     ++  KG    V  + ++I G +K    D A+ + +   
Sbjct: 620 YNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 679

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
             G+  +   Y  LI+ + + G   +A   ++ +++ G +P    +  ++++L +   + 
Sbjct: 680 SNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIN 739

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A    ++M       N    + ++  L       +A      M + G  PN   + +++
Sbjct: 740 EALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 799

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
           + L++ G    A  L +       + D ASY  +++ L  + + + AY I  +   KG  
Sbjct: 800 AGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCN 859

Query: 619 TDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
              K+   L+  L ++   +QA I+  ++R
Sbjct: 860 IHTKTCIALLDALQKDECLEQAAIVGAVLR 889



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 148/614 (24%), Positives = 250/614 (40%), Gaps = 47/614 (7%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W   ++N +   V     +LV  VL  AK+   A+ +FRW ER        E +  ++ +
Sbjct: 78  WGPDVENALSLFVESPKTDLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLV 137

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           + +  K ++   IL +M   G          LI S  K   ++E   +   M++     +
Sbjct: 138 MAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPA 197

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y  L   +       +    F++M   G E + H +  ++  F    +L+ A+   +
Sbjct: 198 FSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLD 257

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +MKS  +  D+V YN  I+ + +  K+D A K F E+K   + P  ++YT+MI       
Sbjct: 258 EMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGN 317

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNS 303
           R D+A+ IF++M+     P A  Y  ++ G   AGK  E   +L     R   P     +
Sbjct: 318 RLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYN 377

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
             +  LG   K G L  A    + M + + P     Y +LI+  CKA   + A K+ D +
Sbjct: 378 CILTCLG---KKGRLGEALRTFEEMKKDAAPN-LSTYNVLIDMLCKAGEVEAAFKVRDAM 433

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPVAFNNLIR 422
             KE  L P         + N MI  LC   +  +A   F  +  K    D V F +LI 
Sbjct: 434 --KEAGLFPN------VMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLID 485

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  K+G  D A+ + + M       +A  Y  LI+S+ + G   D       MI  G SP
Sbjct: 486 GLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSP 545

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
              L  + M+ +F+ G       + + +  +G   ++   + ++  L+  G   E     
Sbjct: 546 DLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETY--- 602

Query: 543 DLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
                         L   + E+G                C++D  +Y   +D    +GK 
Sbjct: 603 -------------ELFYAMKEQG----------------CVLDTHAYNTFIDGFCKSGKV 633

Query: 603 LNAYSILFKIMEKG 616
             AY +L ++  KG
Sbjct: 634 NKAYQLLEEMKTKG 647



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 147/632 (23%), Positives = 274/632 (43%), Gaps = 20/632 (3%)

Query: 19  PQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL--KMIEILGRVGKLNHA 75
           P F  +  +   L   + S+  L  F  ++  G   ++   HL   +I +  R G+L+ A
Sbjct: 196 PAFSAYTTLIGALSSVQESDIMLTLFHQMQELG---YEVSVHLFTTVIRVFAREGRLDAA 252

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             +L +M    +  D  ++ V I+ +GK G V  + K F  +K  G+     +Y ++  +
Sbjct: 253 LSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGV 312

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           + +  R   A   F +M      P  + YN M+ G+  + K + A    E  K+RG    
Sbjct: 313 LCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPS 372

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           V+ YN ++    +  ++ EA + F EMK K+  P + +Y  +I         + A ++ D
Sbjct: 373 VIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRD 431

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
            MK   + PN +T   ++  LC A K+ E   +   M  +   P D   F  L+    K 
Sbjct: 432 AMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSP-DEVTFCSLIDGLGKQ 490

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G ++ A  + + M+       A  Y  LI++F K    +   K+      KE+I R  S 
Sbjct: 491 GRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIF-----KEMIHRGCSP 545

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
              +    N  +  +   G+TGK    F ++  +G + D ++++ LI G  K G     +
Sbjct: 546 ---DLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETY 602

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           E+   M  +G   D  AY   I+ + + G+   A   L+ M   G  P    + SV++ L
Sbjct: 603 ELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGL 662

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            +  R+  A  + +     G++ N+ + + +++     G ++EA   ++ +MQ G  PN 
Sbjct: 663 AKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 722

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++ LL  L +  +   A+             +  +Y  +++ L    K   A+    +
Sbjct: 723 YTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQE 782

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           + ++G   +  +   +IAGL + GN  +A  L
Sbjct: 783 MQKQGLKPNTITYTTMIAGLAKAGNIAEASSL 814



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 212/464 (45%), Gaps = 13/464 (2%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A+  R   K   L P     N++ + L  AK  + A   F  +    + + D  T   
Sbjct: 424 EAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK-ICSPDEVTFCS 482

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ LG+ G+++ A  +   M       +  ++  LI+S+ K G  ++  KIF  M   G
Sbjct: 483 LIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRG 542

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               ++  +A    + + G     +  F ++ S G  P   +Y++++ G   +       
Sbjct: 543 CSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETY 602

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F  MK +G  LD   YNT I+G+ +  K+++A +L  EMK K  +PTV++Y ++I G 
Sbjct: 603 ELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGL 662

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             ++R D+A  +F+E KS  ++ N V Y++L+ G    G++ E   ++ E++++ + P +
Sbjct: 663 AKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP-N 721

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  LL    K+  +N A    + M  L        Y ILI   C+   +++A     
Sbjct: 722 VYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQ 781

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL-MKKGVLDPVAFNNL 420
           ++ ++   L+P +       +Y  MI  L   G   +A   F +     GV D  ++N +
Sbjct: 782 EMQKQG--LKPNTI------TYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAI 833

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           I G S       A++I +    +G        I L+++ L+K E
Sbjct: 834 IEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDA-LQKDE 876



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 113/538 (21%), Positives = 229/538 (42%), Gaps = 13/538 (2%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           + A++   + K R  +P    +N +   L        AL+ F  +++    N    T+  
Sbjct: 355 DEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPN--LSTYNV 412

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I++L + G++  A  +   M + G+  +     ++I+   K   + E+  IF+ M    
Sbjct: 413 LIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKI 472

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
                 ++ +L   + ++GR   A R + +ML     P    Y  ++  FF   + E   
Sbjct: 473 CSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGH 532

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F++M  RG S D+   N  ++   +  +  +   LF E+K +   P V+SY+ +I G 
Sbjct: 533 KIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGL 592

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           V    A +   +F  MK      +   Y   + G C +GK+ +  ++L EM  +   P  
Sbjct: 593 VKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTV 652

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +    + G+  K   L+ A  + +      +      Y  LI+ F K    D A  +++
Sbjct: 653 VTYGSVIDGLA-KIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIME 711

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNL 420
           +L++K   L P         ++N ++  L    +  +A + F+ +   KG  + + ++ L
Sbjct: 712 ELMQKG--LTPN------VYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSIL 763

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  +    + AF   + M ++G+  +   Y  +I    + G  A+A +  +    +G 
Sbjct: 764 INGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGG 823

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            P S+ + +++E L    R   A ++ +    KG   +      +L+AL     +E+A
Sbjct: 824 VPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 232/518 (44%), Gaps = 15/518 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L +   ++ A+ IL  M   GVQ D   +  LI  Y   G  +++V++F  M
Sbjct: 248 TYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEM 307

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              GV  +  +       + + GR   A+ +F+ ML++G +    +Y+ +L G+  +  L
Sbjct: 308 TSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCL 367

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                 F  M   GI  +   +N ++NGY +   + EA  +F +M+++ + P V++Y  +
Sbjct: 368 VDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAV 427

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  +  +   DDA+  F+ M    V+PN   Y  L+ G C  G +V+ ++++ E+  + +
Sbjct: 428 IHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGL 487

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P   S F  L+   CK G +  A  +   +IR     +   +  LI+ +C       A 
Sbjct: 488 GPCILS-FASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAF 546

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           ++ D +V   I        + +  +Y  ++   C NG+     I FR+L+ KGV  P  F
Sbjct: 547 RVHDAMVSVGI--------EPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGV-KPTTF 597

Query: 418 NN--LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
               ++ G    G   +A E+ + M   G+      Y  L+    R     +A T    +
Sbjct: 598 TYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKL 657

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                     +   ++  +F+  R + A  +  S+ + G+   +     ++E L+  G V
Sbjct: 658 CAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSV 717

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           EEA G   +M++SG  P     + ++  L EKG+ + A
Sbjct: 718 EEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 150/650 (23%), Positives = 288/650 (44%), Gaps = 20/650 (3%)

Query: 16  ALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
           AL   + ++++ +    A+  + A  FF  + R G+   D      ++  L    + + A
Sbjct: 99  ALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGM-KADVIVVSSLLRGLCDAKRTDEA 157

Query: 76  RCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI-MKQLG-VERSVKSYDAL 132
             +L   MP+ G   D   +  +++S    G  Q ++ I  + +KQ G    +V  Y  +
Sbjct: 158 VDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTV 217

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + + G+   A   F++M  +G+ P   TYN ++     +  ++ A      M   G+
Sbjct: 218 VHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGV 277

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             D VTYNT+I+GY+   +  +A ++F EM  + + P  ++ +T +       R ++A  
Sbjct: 278 QPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEARE 337

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
            FD M +   K N ++Y+ LL G   AG +V++  +   MV   I P +  VF  L+   
Sbjct: 338 FFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVP-NQHVFNILVNGY 396

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
            K G +  A  + + M +  +  +   Y  +I  FC+    D A+   + +++K +    
Sbjct: 397 AKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGV---- 452

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNP 430
               +   + Y  +IQ  C +G   KAE    ++  KG L P  ++F +LI    KEG  
Sbjct: 453 ----EPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKG-LGPCILSFASLINHLCKEGRV 507

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
             A  I  ++ R G   D + +  LI+ Y   G+ ++A    D+M+  G  P    + ++
Sbjct: 508 FEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTL 567

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG- 549
           +    ++GR+     + + ++ KGVK        IL+ L   G    A      M++SG 
Sbjct: 568 VNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGI 627

Query: 550 --SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
             ++P +  LL+ L     T  A+ +       +   D+     ++  +  A +   A  
Sbjct: 628 AVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEG 687

Query: 608 ILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGEMSRGSQ 656
           +   I + G V   ++   ++  L +EG+ ++A+ + S M++  +S  S 
Sbjct: 688 LFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSH 737



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 174/407 (42%), Gaps = 46/407 (11%)

Query: 16  ALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
            +VP Q   N++ N          A+  F  +++ GL N D  T+L +I    R+G ++ 
Sbjct: 381 GIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGL-NPDVLTYLAVIHAFCRMGSMDD 439

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A      M  KGV+ +  +++ LI+ +   G + ++ ++   ++  G+   + S+ +L  
Sbjct: 440 AMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLIN 499

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + + GR   A+R F+ ++  G +   + +  ++ G+ L  K+  A R  + M S GI  
Sbjct: 500 HLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEP 559

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D+VTY T++NG  +  ++D+   LF E+  K ++PT  +Y  ++ G     R   A  +F
Sbjct: 560 DIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMF 619

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM    +     TY+ LL GLC                E  I     +VF KL      
Sbjct: 620 QEMIESGIAVTIPTYSILLTGLCR-----------NNCTEEAI-----TVFQKLCA---- 659

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              +N   D++                I+I    KA   + A  L   +        P  
Sbjct: 660 ---MNVKFDIVI-------------LNIMISKMFKARRREEAEGLFASI--------PDY 695

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
            L     +Y  M+++L   G   +AE  F  ++K G+     F N+I
Sbjct: 696 GLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVI 742



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 118/249 (47%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           +GK++ A  +   M   G++ D   +  L+    K G + + + +F  +   GV+ +  +
Sbjct: 539 IGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFT 598

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  +   +   GR   AK  F +M+  GI  T  TY+++L G   +   E AI  F+ + 
Sbjct: 599 YGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLC 658

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  +  D+V  N MI+   + ++ +EAE LFA + +  + PTV +YT M++  +     +
Sbjct: 659 AMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVE 718

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +A  +F  M    + P +     ++  L + G++V+    +  +  + I  + ++  M L
Sbjct: 719 EAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLL 778

Query: 309 LGVQCKSGH 317
               CK  H
Sbjct: 779 SLFSCKGKH 787


>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 205/412 (49%), Gaps = 15/412 (3%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL FFRW E+   F H  E++  +IE LG++ + N    ++ DM +KG+    + F ++ 
Sbjct: 139 ALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALIT 197

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             Y +   V+E+V+ F+ M++ G +  V  ++ L   + +      A+  F+KM     +
Sbjct: 198 RRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFK 257

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   +Y ++L G+     L      + +M+  G   DVVT+  +IN + + +K DEA +L
Sbjct: 258 PDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRL 317

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F EM+ KNI+P+   + T+I G  + +R  +AL  F+++K     P A TY A++   C 
Sbjct: 318 FHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCW 377

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL--SIPTE 336
           + KM    +++ EM +  + P ++  +  +L    K      A  V + M R     PT 
Sbjct: 378 SMKMAYAYRMVDEMRKSGVGP-NSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTL 436

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
           +  Y I+I  FC  E  D AI++ D++  K ++  P   L      ++ +I  LCH  + 
Sbjct: 437 ST-YDIMIRMFCNEERVDMAIQIWDEMKAKGVL--PGMHL------FSTLINSLCHEHKL 487

Query: 397 GKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIV-KIMGRRGVP 446
             A  +F++++  G+  P   F+NL +    +G  D+A  +  KI   R  P
Sbjct: 488 EDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIXKLRKAP 539



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 185/388 (47%), Gaps = 12/388 (3%)

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           KQ G + + +SY+ L + + +  ++ +     + M  +GI  +R T+ ++   +  + K+
Sbjct: 148 KQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALITRRYARARKV 206

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+  FE M+  G  + V  +N +++   + + + +A+++F +MK    +P + SYT +
Sbjct: 207 KEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTIL 266

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           ++G+   +       ++ EM+    +P+ VT+  L+   C A K  E  ++  EM  + I
Sbjct: 267 LEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNI 326

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P  + VF  L+        L  A +  + +       EA  Y  ++  +C +     A 
Sbjct: 327 KPSPH-VFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAY 385

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-- 415
           +++D++         +S +   + +Y+ ++ HL    ++ +A   F+++ ++   +P   
Sbjct: 386 RMVDEMR--------KSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLS 437

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            ++ +IR    E   D A +I   M  +GV      +  LI S   + +  DA T    M
Sbjct: 438 TYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEM 497

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTA 503
           ++ G  P +++F ++ ++L +DGR  TA
Sbjct: 498 LDVGIRPPATMFSNLKQALLDDGRKDTA 525



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/422 (22%), Positives = 167/422 (39%), Gaps = 50/422 (11%)

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
           +G + T  +YN+++       +         DMK +GI L   T+  +   Y R +K+ E
Sbjct: 150 KGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALITRRYARARKVKE 208

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A + F +M++   +  V  +  ++           A  +FD+MK    KP+  +YT LL 
Sbjct: 209 AVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLE 268

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G      ++++ +V REM +    P                       DV+         
Sbjct: 269 GWGQDQNLLKLNEVYREMRDEGFEP-----------------------DVVT-------- 297

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                +GILI   CKA  YD AI+L  ++  K I   P          +  +I  L    
Sbjct: 298 -----FGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHV--------FCTLINGLGSEK 344

Query: 395 QTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +A  FF QL   G   +   +N ++  +        A+ +V  M + GV  ++  Y 
Sbjct: 345 RLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYD 404

Query: 454 CLIESYLRKGEPADAKTALDSMI-EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
            ++   ++  +  +A +    M  E G  P  S +  ++     + RV  A ++   M  
Sbjct: 405 IILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKA 464

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           KGV   + L + ++ +L     +E+A      M+  G  P    F +L   L + G+   
Sbjct: 465 KGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDT 524

Query: 570 AV 571
           A+
Sbjct: 525 AL 526



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 111/241 (46%), Gaps = 2/241 (0%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           ++ N    A+  + A++ F  +E A            +I  LG   +L  A      +  
Sbjct: 300 ILINAHCKARKYDEAIRLFHEME-AKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKL 358

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            G   +   +  ++ +Y     +  + ++ D M++ GV  + ++YD +   +++  +   
Sbjct: 359 SGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKE 418

Query: 145 AKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           A   F +M  E G EPT  TY++M+  F    +++ AI+ +++MK++G+   +  ++T+I
Sbjct: 419 AYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLI 478

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           N      K+++A   F EM +  I P    ++ + +  +   R D AL + +++      
Sbjct: 479 NSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIXKLRKA 538

Query: 264 P 264
           P
Sbjct: 539 P 539


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 146/640 (22%), Positives = 279/640 (43%), Gaps = 59/640 (9%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
            F  N +   L  ++N E A  F+R  +E     N    + L  +E   ++ K   A  +
Sbjct: 72  SFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGL--LECFVQMRKTGFAHGV 129

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           L  M K+G  ++   + +L++   +     ++V +   M+Q  +   V SY+ + +    
Sbjct: 130 LALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCE 189

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
                 A +  N+M   G   +  T+ +++  F  + K++ A+   ++MK +G+  D++ 
Sbjct: 190 GKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIV 249

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y ++I G+    ++D  + LF E+ E+   P  I+Y T+I+G+  + R  +A  IF+ M 
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMM 309

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK------------------ 300
              V+PN  TYT L+ GLC  GK  E  ++L  M+++   P                   
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVA 369

Query: 301 ----------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG--HYGI 342
                           DN  +  LLG  C  G L+ A+ +L  M++ S  T+     +  
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429

Query: 343 LIENFCKAEMYDRAIKLLDKLVEK----EIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
           LI   CK     +A+ + D LVEK    +I+            + N ++     +G   K
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIV------------TTNILLNSTLKSGDVNK 477

Query: 399 AEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A   ++Q+   K V +   +  +I G  K G  + A  ++  M    +P     Y CL+ 
Sbjct: 478 AMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLS 537

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
           S  +KG    A    + M  D   P    F  +++   + G +++A  ++  M   G+  
Sbjct: 538 SLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSP 597

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           +L   +K++   L  G+++EA+   D M+ SG  P+    DS+L     +G+T    + +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFV 657

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
              + +D ++D      V+D + ++   ++    L ++ +
Sbjct: 658 KKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVAD 697


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 230/491 (46%), Gaps = 19/491 (3%)

Query: 30  LHGAKNSEHALQFFRWVERA-GLFNHDRETH-----LKMIEILGRVGKLNHARCILL--- 80
           LH + +  H  + FR +  A   FNH   T+     +K  E+   + ++ H + ++    
Sbjct: 56  LHSSSSYRHKNRTFRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSK 115

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G+  D     +LI  + +   V     +   + +LG+E +V ++  L       G
Sbjct: 116 QMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEG 175

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A   F+ M++ G +P  H+Y++++ G     K    I+  E MK  G   DVV YN
Sbjct: 176 KIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYN 235

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+++   + + ++EA  +F +MK   I PTV++YT++I G   + R  +A  + +EMK  
Sbjct: 236 TIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGG 295

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           ++ P+ V ++ L+  +C  G++ E + +L+ M E  + P D + +  L+   C    +  
Sbjct: 296 NIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEP-DVATYNTLMNGYCLRMEVVE 354

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  V + MI      +   + IL+  +CKA+  D A +L D++  + +I  P +      
Sbjct: 355 ARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLI--PDTV----- 407

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            SYN +I  LC   +  +AE  F+ +   G   + V ++ L+   SK+G  D A  + + 
Sbjct: 408 -SYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRA 466

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G+  D   Y  +I+   + G+  DA+     +   G  P + +    ++ + + G 
Sbjct: 467 MENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGL 526

Query: 500 VQTASRVMKSM 510
           +  A +  + M
Sbjct: 527 LDEAHKAFRQM 537



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 182/407 (44%), Gaps = 10/407 (2%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN M++    P+   +  +          +T +   + M+  GIS DV++   +IN + R
Sbjct: 79  FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
              +D    +  ++ +  +EP VI+++T+I G+    +   A+ +FD M +   KPN  +
Sbjct: 139 LCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS 198

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y+ ++ GLC  GK  EV K+L  M      P D  ++  ++   CK   +N A  +   M
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVVGCEP-DVVIYNTIVDRLCKDRLVNEAVHIFCKM 257

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               I      Y  LI        +  A  LL+++    I+  P      +  +++ +I 
Sbjct: 258 KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIM--P------DLVAFSVLID 309

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            +C  G+  +A +  + + + GV   VA +N L+ G+        A ++ ++M  +G   
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMP 369

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D  ++  L+  Y +     +AK   D M   G  P +  + +++  L +  R   A  + 
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELF 429

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF 554
           K M   G   NL   + +L+ L  +G++++A+G    M  SG  P+ 
Sbjct: 430 KDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDL 476



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 101/469 (21%), Positives = 188/469 (40%), Gaps = 50/469 (10%)

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +  A+  F  M +      +V +  + +   R K       L  +M+   I   V+S T 
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I  +  +   D    +  ++    ++PN +T++ L+ G C  GK+    ++   MV R 
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
             P  +S                                    Y I+I+  C+       
Sbjct: 192 YKPNVHS------------------------------------YSIIIKGLCRVGKTTEV 215

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV- 415
           IKLL+ +  K +   P   +      YN ++  LC +    +A   F ++   G+L  V 
Sbjct: 216 IKLLEHM--KVVGCEPDVVI------YNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVV 267

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            + +LI G    G    AF ++  M    +  D  A+  LI+   ++GE ++A+  L +M
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            E G  P  + + ++M        V  A +V + M+ KG   ++   + ++        +
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           +EA    D M   G +P+   +++L+S L +  + + A +L           +L +Y  +
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQA 640
           LD L   G    A   LF+ ME  G+  D  + + +I G+ + G  K A
Sbjct: 448 LDCLSKQGYLDQAMG-LFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDA 495



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 49/280 (17%)

Query: 28  NVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK--------MIEILGRVGKLNHARCIL 79
           +++HG +N        RW E  GL N  +  ++         +I+I+ + G+++ AR IL
Sbjct: 271 SLIHGLRN------LGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVIL 324

Query: 80  LDMPKKGVQWD------------------------EDM-----------FEVLIESYGKK 104
             M + GV+ D                        E M           F +L+  Y K 
Sbjct: 325 KTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKA 384

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
             + E+ ++FD M   G+     SY+ L   + +  R + A+  F  M S G  P   TY
Sbjct: 385 KRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTY 444

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           +++L        L+ A+  F  M++ G+  D+VTYN MI+G  ++ K  +A +LFAE+  
Sbjct: 445 SILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSV 504

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           K ++P     T  I G       D+A + F +M+  D  P
Sbjct: 505 KGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 225/503 (44%), Gaps = 37/503 (7%)

Query: 83  PKKGVQWD----EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           P  G+Q D      +  VL+E  G K  + ESV  +  M   G++  V +++ L K + R
Sbjct: 46  PLFGIQADTVVYNHLLNVLVE--GSKMKLLESV--YSEMGARGIKPDVVTFNTLMKALCR 101

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             +   A     +M S G+ P   T+  ++ GF     +E A+R    M   G S   VT
Sbjct: 102 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 161

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
            N +INGY +  ++++A     +      EP  I+Y T + G    +    AL++ D M 
Sbjct: 162 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 221

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
                P+  TY  ++  LC  G++ E + +L +MV+R   P D + F  L+   C    L
Sbjct: 222 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRL 280

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL---------VEKEII 369
             A D+ + +    +  +   + ILI   CK      A++L +++         V    +
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340

Query: 370 LRPQSTL-----------DMEAS-------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
           +    +L           DME++       +YN +I  LC   +  +AE  F Q+  +G+
Sbjct: 341 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 400

Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             + + FN LI G  K+   D AFE++  M   G+  +   Y  ++  Y ++G+   A  
Sbjct: 401 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 460

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L++M  +G       + +++  L + GR Q A +V++ M  KG++        +L++L 
Sbjct: 461 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 520

Query: 531 MRGHVEEALGRIDLMMQSGSVPN 553
            R ++ +AL     M + G  P+
Sbjct: 521 RRNNIRDALSLFREMAEVGEPPD 543



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/530 (23%), Positives = 234/530 (44%), Gaps = 46/530 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +++ L R  ++  A  +L +M  +GV  DE  F  L++ + ++G ++ ++++ 
Sbjct: 88  DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 147

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M ++G   +  + + L     + GR   A  Y  + +++G EP + TYN  + G   +
Sbjct: 148 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 207

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A++  + M   G   DV TYN ++N   +  +++EA+ +  +M ++   P + ++
Sbjct: 208 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267

Query: 235 TTMIKGYVAVERADD-----------------------------------ALRIFDEMKS 259
            T+I       R ++                                   ALR+F+EMK+
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               P+ VTY  L+  LC  GK+ +   +L++M E    P+    +  ++   CK   + 
Sbjct: 328 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCPRSTITYNTIIDGLCKKMRIE 386

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A +V   M    I   A  +  LI+  CK +  D A +L+++++ +   L+P +     
Sbjct: 387 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG--LQPNNI---- 440

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +YN ++ H C  G   KA      +   G  +D V +  LI G  K G    A ++++
Sbjct: 441 --TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLR 498

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE-D 497
            M  +G+     AY  +++S  R+    DA +    M E G  P +  ++ V   L    
Sbjct: 499 GMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 558

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
           G ++ A   M  MV+KG          + E LL  G  +  +  I+++M+
Sbjct: 559 GPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIME 608



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 199/429 (46%), Gaps = 12/429 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL + +  E A  F  D+ T+   +  L +   + HA  ++  M ++G   D   + +
Sbjct: 176 EDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 234

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++    K G ++E+  I + M   G    + +++ L   +    R   A     ++  +G
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P  +T+N+++           A+R FE+MK+ G + D VTYNT+I+      K+ +A 
Sbjct: 295 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 354

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L  +M+      + I+Y T+I G     R ++A  +FD+M    +  NA+T+  L+ GL
Sbjct: 355 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 414

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   K+ +  +++ +M+   + P +N  +  +L   CK G +  AAD+L+ M       +
Sbjct: 415 CKDKKIDDAFELINQMISEGLQP-NNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 473

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              YG LI   CKA     A+K+L  +  K   +RP         +YNP++Q L      
Sbjct: 474 VVTYGTLINGLCKAGRTQVALKVLRGMRIKG--MRPTP------KAYNPVLQSLFRRNNI 525

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP-DSAFEIVKIMGRRGVPRDADAYIC 454
             A   FR++ + G   D + +  + RG  + G P   AF+ +  M  +G   +  ++  
Sbjct: 526 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 585

Query: 455 LIESYLRKG 463
           L E  L  G
Sbjct: 586 LAEGLLNLG 594



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 194/432 (44%), Gaps = 15/432 (3%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G + D+  +   +    +   V  ++K+ D+M Q G +  V +Y+ +   + + G+   A
Sbjct: 189 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 248

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
           K   N+M+  G  P   T+N ++       +LE A+     +  +G+S DV T+N +IN 
Sbjct: 249 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 308

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +      A +LF EMK     P  ++Y T+I    ++ +   AL +  +M+S     +
Sbjct: 309 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            +TY  ++ GLC   ++ E ++V  +M  + I  ++   F  L+   CK   ++ A +++
Sbjct: 369 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI-SRNAITFNTLIDGLCKDKKIDDAFELI 427

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             MI   +      Y  ++ ++CK     +A  +L+ +          +  +++  +Y  
Sbjct: 428 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT--------ANGFEVDVVTYGT 479

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I  LC  G+T  A    R +  KG+   P A+N +++   +  N   A  + + M   G
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIE---DGHSPASSLFRSVMESLFEDGRVQ 501
            P DA  Y  +     R G P   K A D M+E    G  P  S FR + E L   G   
Sbjct: 540 EPPDALTYKIVFRGLCRGGGP--IKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDD 597

Query: 502 TASRVMKSMVEK 513
              R ++ ++EK
Sbjct: 598 YFIRAIEIIMEK 609



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 3/306 (0%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A     Q  ++ + P  +  N++ N L    +   AL+ F  ++ +G    D  T+  
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC-TPDEVTYNT 339

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L  +GKL  A  +L DM   G       +  +I+   KK  ++E+ ++FD M   G
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 399

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           + R+  +++ L   + +  +   A    N+M+SEG++P   TYN +L  +     ++ A 
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 459

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              E M + G  +DVVTY T+ING  +  +   A K+   M+ K + PT  +Y  +++  
Sbjct: 460 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 519

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVERYIPPK 300
                  DAL +F EM      P+A+TY  +  GLC  G  + E    + EMV++   P+
Sbjct: 520 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 579

Query: 301 DNSVFM 306
            +S  M
Sbjct: 580 FSSFRM 585


>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
 gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
 gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
          Length = 632

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 215/443 (48%), Gaps = 21/443 (4%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEH-ALQFFRWVER----AGLFNHDRETHLKMIE 64
           L+  + AL P     LV  VL   K++   + +FFRW       +G F H   T+ KM+ 
Sbjct: 170 LEAALTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVH 229

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           ILG+  +      ++ +M K+G     D F++ I+S+   G ++ +V +F++M+  G + 
Sbjct: 230 ILGKARQFQSMVALIQEMGKEGALC-MDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDD 288

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
            V+S++ L   + + G    A + F++M  +   P   +Y  ++  +  +  L  A R +
Sbjct: 289 GVESFNCLLVALAQEGLGREANQVFDRM-RDRYAPDLRSYTALMLAWCNARNLVEAGRVW 347

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M   G+  DVV +NTMI G  R ++  EA K+F  MK K   P V +YT +I+ +   
Sbjct: 348 NEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKR 407

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            + D A+R F+EM+    +P+  TYT LL G  +A +M  V  +L EM ++  PP D   
Sbjct: 408 GKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPP-DGRT 466

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN-FCKAEMYDRAIKLLDKL 363
           +  L+ +       + AA + K MI+  +      Y +++++ F     Y     + +++
Sbjct: 467 YNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEM 526

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIR 422
             K I          + +SY   I     +G+  +A  +  ++++KG+  P + +N    
Sbjct: 527 HRKGICP--------DVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAA 578

Query: 423 GHSKEGNPDSAFEI---VKIMGR 442
             SK G PD  +E+   VK  G+
Sbjct: 579 DFSKAGKPDILYELAQKVKFTGK 601



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 6/249 (2%)

Query: 2   AERAWTTRLQNKIRALVPQFDHN-LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           A R W   L+N ++  V    HN ++  +L G +  E A++ F  ++  G    +  T+ 
Sbjct: 343 AGRVWNEMLENGLKPDV--VVHNTMIEGLLRGQRRPE-AVKMFELMKAKGPAP-NVWTYT 398

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            +I    + GK++ A     +M   G Q D   +  L+  YG    +     + + M Q 
Sbjct: 399 MLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQK 458

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK-LET 179
           G     ++Y+AL KL+  R     A R + KM+ +G+EPT HTYN+M+  +FL  +    
Sbjct: 459 GCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMM 518

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
               +E+M  +GI  DV +Y   ING+ R  + +EA K   EM +K ++   I Y     
Sbjct: 519 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAA 578

Query: 240 GYVAVERAD 248
            +    + D
Sbjct: 579 DFSKAGKPD 587



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/433 (20%), Positives = 159/433 (36%), Gaps = 57/433 (13%)

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVAVERA 247
           S G +   +TY  M++   + ++      L  EM KE  +   + ++   IK + A    
Sbjct: 214 SGGFAHTTITYCKMVHILGKARQFQSMVALIQEMGKEGAL--CMDAFKIAIKSFAAAGEI 271

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +A+ +F+ M++        ++  LL  L   G   E  +V   M +RY P  D   +  
Sbjct: 272 KNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYAP--DLRSYTA 329

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   C + +L  A  V   M+                                     E
Sbjct: 330 LMLAWCNARNLVEAGRVWNEML-------------------------------------E 352

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSK 426
             L+P   +      +N MI+ L    +  +A   F  +  KG    V  +  LIR H K
Sbjct: 353 NGLKPDVVV------HNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCK 406

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G  D A    + M   G   D   Y CL+  Y            L+ M + G  P    
Sbjct: 407 RGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRT 466

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG-HVEEALGRIDLM 545
           + ++++ L        A+R+ K M++KG++  +     ++++  + G +        + M
Sbjct: 467 YNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEM 526

Query: 546 MQSGSVPNFDSLLSVLS---EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
            + G  P+ +S    ++     G+   A K ++  + +        Y K       AGK 
Sbjct: 527 HRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKP 586

Query: 603 LNAYSILFKIMEK 615
                IL+++ +K
Sbjct: 587 ----DILYELAQK 595



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 397 GKAEIF------FRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           GKA  F       +++ K+G L   AF   I+  +  G   +A  + ++M   G     +
Sbjct: 232 GKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVE 291

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           ++ CL+ +  ++G   +A    D M  D ++P    + ++M +      +  A RV   M
Sbjct: 292 SFNCLLVALAQEGLGREANQVFDRM-RDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEM 350

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
           +E G+K ++ +   ++E LL      EA+   +LM   G  PN   +  L+    ++GK 
Sbjct: 351 LENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKM 410

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A++  +      C  D+A+Y  +L     A +     ++L ++ +KG   D ++ + L
Sbjct: 411 DMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNAL 470

Query: 628 IAGL-NQEGNTKQADILSRMIR 648
           I  L N+      A I  +MI+
Sbjct: 471 IKLLTNRNMPDDAARIYKKMIK 492


>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 205/412 (49%), Gaps = 15/412 (3%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL FFRW E+   F H  E++  +IE LG++ + N    ++ DM +KG+    + F ++ 
Sbjct: 139 ALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALIT 197

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             Y +   V+E+V+ F+ M++ G +  V  ++ L   + +      A+  F+KM     +
Sbjct: 198 RRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFK 257

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   +Y ++L G+     L      + +M+  G   DVVT+  +IN + + +K DEA +L
Sbjct: 258 PDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRL 317

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F EM+ KNI+P+   + T+I G  + +R  +AL  F+++K     P A TY A++   C 
Sbjct: 318 FHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCW 377

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL--SIPTE 336
           + KM    +++ EM +  + P ++  +  +L    K      A  V + M R     PT 
Sbjct: 378 SMKMAYAYRMVDEMRKSGVGP-NSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTL 436

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
           +  Y I+I  FC  E  D AI++ D++  K ++  P   L      ++ +I  LCH  + 
Sbjct: 437 ST-YDIMIRMFCNEERVDMAIQIWDEMKAKGVL--PGMHL------FSTLINSLCHEHKL 487

Query: 397 GKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIV-KIMGRRGVP 446
             A  +F++++  G+  P   F+NL +    +G  D+A  +  KI   R  P
Sbjct: 488 EDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKKLRKAP 539



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 185/388 (47%), Gaps = 12/388 (3%)

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           KQ G + + +SY+ L + + +  ++ +     + M  +GI  +R T+ ++   +  + K+
Sbjct: 148 KQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALITRRYARARKV 206

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+  FE M+  G  + V  +N +++   + + + +A+++F +MK    +P + SYT +
Sbjct: 207 KEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTIL 266

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           ++G+   +       ++ EM+    +P+ VT+  L+   C A K  E  ++  EM  + I
Sbjct: 267 LEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNI 326

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P  + VF  L+        L  A +  + +       EA  Y  ++  +C +     A 
Sbjct: 327 KPSPH-VFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAY 385

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-- 415
           +++D++         +S +   + +Y+ ++ HL    ++ +A   F+++ ++   +P   
Sbjct: 386 RMVDEMR--------KSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLS 437

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            ++ +IR    E   D A +I   M  +GV      +  LI S   + +  DA T    M
Sbjct: 438 TYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEM 497

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTA 503
           ++ G  P +++F ++ ++L +DGR  TA
Sbjct: 498 LDVGIRPPATMFSNLKQALLDDGRKDTA 525



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/422 (22%), Positives = 167/422 (39%), Gaps = 50/422 (11%)

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
           +G + T  +YN+++       +         DMK +GI L   T+  +   Y R +K+ E
Sbjct: 150 KGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALITRRYARARKVKE 208

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A + F +M++   +  V  +  ++           A  +FD+MK    KP+  +YT LL 
Sbjct: 209 AVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLE 268

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G      ++++ +V REM +    P                       DV+         
Sbjct: 269 GWGQDQNLLKLNEVYREMRDEGFEP-----------------------DVVT-------- 297

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                +GILI   CKA  YD AI+L  ++  K I   P          +  +I  L    
Sbjct: 298 -----FGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHV--------FCTLINGLGSEK 344

Query: 395 QTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +A  FF QL   G   +   +N ++  +        A+ +V  M + GV  ++  Y 
Sbjct: 345 RLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYD 404

Query: 454 CLIESYLRKGEPADAKTALDSMI-EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
            ++   ++  +  +A +    M  E G  P  S +  ++     + RV  A ++   M  
Sbjct: 405 IILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKA 464

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           KGV   + L + ++ +L     +E+A      M+  G  P    F +L   L + G+   
Sbjct: 465 KGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDT 524

Query: 570 AV 571
           A+
Sbjct: 525 AL 526



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 112/241 (46%), Gaps = 2/241 (0%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           ++ N    A+  + A++ F  +E A            +I  LG   +L  A      +  
Sbjct: 300 ILINAHCKARKYDEAIRLFHEME-AKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKL 358

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            G   +   +  ++ +Y     +  + ++ D M++ GV  + ++YD +   +++  +   
Sbjct: 359 SGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKE 418

Query: 145 AKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           A   F +M  E G EPT  TY++M+  F    +++ AI+ +++MK++G+   +  ++T+I
Sbjct: 419 AYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLI 478

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           N      K+++A   F EM +  I P    ++ + +  +   R D AL + +++K     
Sbjct: 479 NSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKKLRKA 538

Query: 264 P 264
           P
Sbjct: 539 P 539


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 139/577 (24%), Positives = 250/577 (43%), Gaps = 46/577 (7%)

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           ++++   + G V E++ +   M +  V   + SY+ L   + +  +   A     +M + 
Sbjct: 3   IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G  P   T   ++ G     +++ A+   E MK +G   DVV Y T+I+G+     +D  
Sbjct: 63  GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           ++LF EM  K I   V++Y+ ++ G   + +  +A  + + M    + P+ VTYT L+ G
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC  G+      +L  MVE+   P  N  +  LL   CK G +  A  +L+ MI      
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEP-SNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   Y  L++  C     D A+KL + + + E  L P         ++N +I  LC  G+
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN------VFTFNMLIGGLCKEGR 295

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             KA    R+++KKG   + V +N L+ G  K G    A E+ K +   G   ++  Y  
Sbjct: 296 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 355

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS----- 509
           LI+ + +      AK     M   G +PA   + ++M SL ++G ++ A  + +      
Sbjct: 356 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 415

Query: 510 ------------------------------MVEKGVKENLDLVAKILEALLMRGHVEEAL 539
                                         MVE G++ +    + ++  L   G ++EA 
Sbjct: 416 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAK 475

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             ++ M+ SG  P+   +DSLL  LS KG T   + LL     +  ++D      +L  L
Sbjct: 476 SALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 535

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
             + + ++   +L    +        S ++L+  L+Q
Sbjct: 536 CHSIQEVDVMELLPTFFQGTSEGASISCNELLMQLHQ 572



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 215/513 (41%), Gaps = 47/513 (9%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  ++  +I  L +  KL  A  +LL+M   G   +      L++   K G + E++++ 
Sbjct: 32  DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL 91

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + MK+ G +  V  Y  L       G     K  F++ML +GI     TY+ ++ G    
Sbjct: 92  EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRL 151

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + + A      M   GI  DVVTY  +I+G  +  +   A  L   M EK  EP+ ++Y
Sbjct: 152 GQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 211

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV- 293
             ++ G        DA +I   M     K + VTY  L+ GLCD GK+ E  K+   M  
Sbjct: 212 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 271

Query: 294 -ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR---------------------- 330
            E  + P +   F  L+G  CK G L  A  + + M++                      
Sbjct: 272 NENCLEP-NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330

Query: 331 -------------LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                        L     +  Y ILI+ FCK  M + A  L  +       +R    L+
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE-------MRTHG-LN 382

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
                YN ++  LC  G   +A+  F+++       D ++FN +I G  K G+     E+
Sbjct: 383 PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL 442

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G+  DA  +  LI    + GE  +AK+AL+ M+  G +P + ++ S+++ L  
Sbjct: 443 QMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSS 502

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
            G       ++  M  KG   +  +V+ IL  L
Sbjct: 503 KGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 535



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 227/522 (43%), Gaps = 27/522 (5%)

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + + K + R G    A     +M  + + P   +YN ++ G   + KL+ A+    +M++
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G   + VT  T+++G  +  +MDEA +L   MK+K  +  V+ Y T+I G+      D 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
              +FDEM    +  N VTY+ L+ GLC  G+  E   VL  M E  I P D   +  L+
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHP-DVVTYTGLI 180

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              CK G    A D+L  M+          Y +L+   CK  +   A K+L  ++EK   
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK--- 237

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDP--VAFNNLIRGHSK 426
                    +  +YN +++ LC  G+  +A   F  +   +  L+P    FN LI G  K
Sbjct: 238 -----GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCK 292

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           EG    A +I + M ++G   +   Y  L+   L+ G+  +A      +++ G  P S  
Sbjct: 293 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 352

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           +  +++   +   +  A  +   M   G+   L     ++ +L   G +E+A      M 
Sbjct: 353 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 412

Query: 547 QSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII---------DLASYEKVLDALL 597
            +   P+  S  +++         +K  DF   ++  +         D  ++  +++ L 
Sbjct: 413 NANCEPDIISFNTMID------GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLS 466

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
             G+   A S L +++  G   D    D L+ GL+ +G+T +
Sbjct: 467 KLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTE 508


>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
 gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 217/466 (46%), Gaps = 19/466 (4%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F   I    K G++ E+++IFD M Q     + + Y+    +++ R R+ +A+ Y+++M
Sbjct: 11  VFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRM 70

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           + +G   T  TY+  +             R  EDMK  G   D+  +N  +N   R   +
Sbjct: 71  IPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLL 130

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           + A K F EM  K  EP V++YT ++      ++ D A+  +  M +  + P+    TAL
Sbjct: 131 ELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTAL 190

Query: 273 LPGLCDAGKM-----VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           + GLCD GK+     + V ++  EM        +N +F  L+   CKSG ++ A  +   
Sbjct: 191 VVGLCDGGKVDLAYELTVGEMKGEM------KFNNLIFNSLMSGFCKSGRISKALAIKSF 244

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M +     +   Y IL+  FC   M + A K + K+  + I + P      +  SYN ++
Sbjct: 245 MSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKM--ERIGMEP------DVYSYNQLL 296

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
           + LC   +  KA      + +KG+ D V++N +I    K      A+ + + MG++ V  
Sbjct: 297 KGLCKANRLDKAYKLMNTMWEKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAP 356

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   +  LI+++L +G P  AK  L +M +    P    + +V++   +  +++ A  V 
Sbjct: 357 DVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVF 416

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           + M+E G+  ++     ++  L     V EA+   + M   G  P+
Sbjct: 417 RDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPD 462



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/419 (20%), Positives = 187/419 (44%), Gaps = 46/419 (10%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++ + MKQLG    + +++    L+ R     +A ++F++M+++G EP   TY +++   
Sbjct: 100 RLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRL 159

Query: 172 FLSLKLETAIRFFEDMKSRGISLDV----------------------------------- 196
             + + + A+ F+  M ++G+S D+                                   
Sbjct: 160 CKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNN 219

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + +N++++G+ +  ++ +A  + + M +   EP +I+Y  ++  +      + A +   +
Sbjct: 220 LIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKK 279

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M+   ++P+  +Y  LL GLC A ++ +  K++  M E+ +   D   +  ++G  CKS 
Sbjct: 280 MERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLC--DTVSYNTVIGALCKSF 337

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
               A  + + M +  +  + G +  LI+ F        A  LL  +         Q+ L
Sbjct: 338 ATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMT--------QTVL 389

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
             +   Y  ++ + C   +   A+  FR +++ G+  D V++N LI G  K      A  
Sbjct: 390 IPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAML 449

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           + + M  RG   D   +  +I   LRK E + A    D M+E G++    L  ++++++
Sbjct: 450 LYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAI 508



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 115/235 (48%), Gaps = 2/235 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ N        E A +  + +ER G+   D  ++ ++++ L +  +L+ A  ++  M
Sbjct: 257 YNILLNFFCDGLMLELAGKSMKKMERIGM-EPDVYSYNQLLKGLCKANRLDKAYKLMNTM 315

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            +KG+  D   +  +I +  K    +++ ++F+ M Q  V   V ++  L K  L  G  
Sbjct: 316 WEKGL-CDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSP 374

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
            +AK     M    + P    Y  ++  F  + K+E A   F DM   GIS DVV+YN +
Sbjct: 375 HIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNAL 434

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           ING  +  K+ EA  L+ EM+ +   P  +++  +I G +  +    A +++D+M
Sbjct: 435 INGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQM 489



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 83/403 (20%), Positives = 158/403 (39%), Gaps = 49/403 (12%)

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER--YIPP 299
           V V   D+A+RIFDEM   D    +  Y   +  L    +    +     M+ +   + P
Sbjct: 20  VKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTP 79

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
              S F+  L   C+  +      +L+ M +L    +   + I +    +  + + A+K 
Sbjct: 80  FTYSRFISAL---CEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKF 136

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
            D++V K          + +  +Y  ++  LC   Q  KA  F+R ++ KG+  D  A  
Sbjct: 137 FDEMVAK--------GREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACT 188

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L+ G    G  D A+E+     +  +  +   +  L+  + + G  + A      M + 
Sbjct: 189 ALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKH 248

Query: 479 GHSPASSLFRSVMESLFEDG-RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           G  P    + +++ + F DG  ++ A + MK M   G++ ++    ++L+ L     +++
Sbjct: 249 GCEPDLITY-NILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDK 307

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A                  L++ + EKG                 + D  SY  V+ AL 
Sbjct: 308 AY----------------KLMNTMWEKG-----------------LCDTVSYNTVIGALC 334

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +  T  AY +  ++ +K    D  +   LI     EG+   A
Sbjct: 335 KSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIA 377


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 200/423 (47%), Gaps = 46/423 (10%)

Query: 66  LGRVGKLNHARCILLDMPKKG-VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           L   G++  A  +L    K G    D      L+  Y + G V E+ ++FD+M +LG+  
Sbjct: 12  LSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTP 71

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           +  ++ AL       GR       F KM   GIEP  +TYN+++  +  + + E A   F
Sbjct: 72  NEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLF 131

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           E+M ++GI+ +VV+YNT+I G  R++KM +A +L   M+ + I P+V+++  ++ GY   
Sbjct: 132 EEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKA 191

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            +  +AL   ++M+    +P+AVTY AL+ G C A  M+   +   +M ER + P   + 
Sbjct: 192 GKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVT- 250

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
                                              Y ILI+ F +    D+A ++   + 
Sbjct: 251 -----------------------------------YTILIDAFARENDMDKAFEMFAGM- 274

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRG 423
                   ++ L+++  +Y  ++  LC  G    A   F+ + +KG+ +  V ++ LI G
Sbjct: 275 -------EKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYG 327

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
           + +EG+   A +++  M ++G   ++ +Y   I      G+ ++A+  +D M+  G   +
Sbjct: 328 YGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTS 387

Query: 484 SSL 486
            S+
Sbjct: 388 ESV 390



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 168/409 (41%), Gaps = 45/409 (11%)

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V +  AL     R G    A+R F+ M   G+ P   T+  ++ G+F+  + E  +  FE
Sbjct: 38  VAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFE 97

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M+  GI  ++ TYN ++  + R  + + A  LF EM  K I   V+SY T+I G     
Sbjct: 98  KMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYR 157

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           +  DA ++ + M+   ++P+ VT+  L+ G   AGKM        +M             
Sbjct: 158 KMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQM------------- 204

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
            ++ G Q                     P+ A  Y  LI  FC+A    RA +    +  
Sbjct: 205 -RMAGYQ---------------------PS-AVTYNALIAGFCRARDMIRANRAFSDM-- 239

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
           KE  L P         +Y  +I          KA   F  + K G+ +D   +  L+   
Sbjct: 240 KERGLAPTKV------TYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHAL 293

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
             EGN   A ++ + +G +G+      Y  LI  Y R+G    A   +  M + G  P S
Sbjct: 294 CMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNS 353

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           + +   +  L  DG+   A  ++  MV  GV+ +  +   +L A   +G
Sbjct: 354 ASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQG 402



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 166/376 (44%), Gaps = 13/376 (3%)

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           K+   +LDV     +++GY R   + EA+++F  M    + P  +++T +I GY    R 
Sbjct: 30  KAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRR 89

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           +  L +F++M+   ++PN  TY  L+   C  G+    + +  EM  + I  ++   +  
Sbjct: 90  EKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGIT-RNVVSYNT 148

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   C+   +  A  +L+ M R  I      + +L++ + KA     A+   +++    
Sbjct: 149 LIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQM---- 204

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHS 425
                 +     A +YN +I   C      +A   F  + ++G L P  V +  LI   +
Sbjct: 205 ----RMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERG-LAPTKVTYTILIDAFA 259

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           +E + D AFE+   M + G+  D   Y  L+ +   +G   DA+    S+ E G    + 
Sbjct: 260 RENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNV 319

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
           ++  ++     +G    A +++  M +KG   N       +  L   G   EA   ID M
Sbjct: 320 IYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDM 379

Query: 546 MQSGSVPNFDSLLSVL 561
           +++G V   +S+  VL
Sbjct: 380 VRAG-VQTSESVRQVL 394



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 138/295 (46%), Gaps = 6/295 (2%)

Query: 26  VYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            YN+L G        E A   F  +   G+   +  ++  +I  L R  K+  A  +L  
Sbjct: 110 TYNILVGEWCRTGEFERARLLFEEMPAKGI-TRNVVSYNTLIAGLCRYRKMKDATQLLEL 168

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M ++G++     F +L++ YGK G +  ++   + M+  G + S  +Y+AL     R   
Sbjct: 169 MRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARD 228

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            + A R F+ M   G+ PT+ TY +++  F     ++ A   F  M+  G+ +DV TY  
Sbjct: 229 MIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGV 288

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++       M +A KLF  + EK ++   + Y  +I GY     +  A+++  EM+   
Sbjct: 289 LVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKG 348

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
             PN+ +Y   +  LC+ GK  E + ++ +MV   +   + SV   LL  + + G
Sbjct: 349 FVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSE-SVRQVLLNAKARQG 402



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 151/364 (41%), Gaps = 15/364 (4%)

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           K+ D   +    TAL+ G C +G + E Q+V   M    + P + + F  L+      G 
Sbjct: 30  KAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVT-FTALIHGYFIHGR 88

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                 + + M    I      Y IL+  +C+   ++RA  L +++        P   + 
Sbjct: 89  REKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEM--------PAKGIT 140

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFE 435
               SYN +I  LC   +   A     +LM++  + P  V FN L+ G+ K G   +A  
Sbjct: 141 RNVVSYNTLIAGLCRYRKMKDATQLL-ELMRREGIRPSVVTFNLLVDGYGKAGKMSNALH 199

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
               M   G    A  Y  LI  + R  +   A  A   M E G +P    +  ++++  
Sbjct: 200 FSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFA 259

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-SVPN- 553
            +  +  A  +   M + G++ ++     ++ AL M G++++A      + + G  V N 
Sbjct: 260 RENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNV 319

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            +D L+     +G +  A+KL+     +  + + ASY   +  L   GK   A +++  +
Sbjct: 320 IYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDM 379

Query: 613 MEKG 616
           +  G
Sbjct: 380 VRAG 383



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 67/310 (21%), Positives = 114/310 (36%), Gaps = 44/310 (14%)

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG--VLDPVAFNNLIRGHSKEGNPDSAFEIV 437
           A++    ++ L   G+   A     +  K G   LD  A   L+ G+ + G+   A  + 
Sbjct: 2   AATTAVAVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVF 61

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
            +M R G+  +   +  LI  Y   G         + M   G  P    +  ++      
Sbjct: 62  DVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRT 121

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNF 554
           G  + A  + + M  KG+  N+     ++  L     +++A   ++LM + G   SV  F
Sbjct: 122 GEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTF 181

Query: 555 DSLLSVLSEKGKTIAAVKLLD--------------------FCLGRDCIIDLASYEKVLD 594
           + L+    + GK   A+   +                    FC  RD I    ++  + +
Sbjct: 182 NLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKE 241

Query: 595 ALLAAGKTLNAYSIL----------------FKIMEKGGV-TDWKSSDKLIAGLNQEGNT 637
             LA  K    Y+IL                F  MEK G+  D ++   L+  L  EGN 
Sbjct: 242 RGLAPTKV--TYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNM 299

Query: 638 KQADILSRMI 647
           K A  L + I
Sbjct: 300 KDARKLFQSI 309


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 187/384 (48%), Gaps = 12/384 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L +   ++ A  +   M K GV  D  M+  L+  Y   G  +E++ IF
Sbjct: 242 DVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIF 301

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M + GVE  V +Y AL   + + G+   A++ F+ ++  G +P   TY  +L G+   
Sbjct: 302 KKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATE 361

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L       + M  +G+ L    +N ++  Y +  K+DEA  +F+ M+++ + P +++Y
Sbjct: 362 GALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNY 421

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++       R DDAL  F+ +KS  + PN V +T L+ GLC   K  +V+++  EM++
Sbjct: 422 GTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMID 481

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R I   D   F  ++G  CK G +  A ++   M+R+ I      Y  LI+ +C     D
Sbjct: 482 RGI-CLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMD 540

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A+KLL  +V   +  +P         +YN +I     NG+        R++  KGV +P
Sbjct: 541 EAMKLLGVMVFNGV--KPSDV------TYNTIINGYSQNGRIEDGLTLLREMDGKGV-NP 591

Query: 415 --VAFNNLIRGHSKEGNPDSAFEI 436
             V +  L++G  + G   +A E+
Sbjct: 592 GIVTYEMLLQGLFQAGRTVAAKEL 615



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 201/416 (48%), Gaps = 17/416 (4%)

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
           Y  ++ G     +L+ A   F+ M  RG S DVVTY+++I+  ++ + MD+A ++F  M 
Sbjct: 211 YTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMV 270

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           +  + P  I YT+++ GY +  +  +A+ IF +M    V+P+ VTYTAL+  LC  GK  
Sbjct: 271 KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKST 330

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH--YG 341
           E +K+   +V+R   P D++ +  LL      G L    D+L  M++  +  + GH  + 
Sbjct: 331 EARKIFDSLVKRGHKP-DSTTYGTLLHGYATEGALVEMHDLLDLMMKKGM--QLGHHIFN 387

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
           +++  + K    D A+ +   +         Q  L+ +  +Y  ++  LC  G+   A  
Sbjct: 388 MIMGAYAKHNKVDEALLVFSNM--------RQQGLNPDIVNYGTVLDILCTAGRVDDALS 439

Query: 402 FFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F  L  +G+  + V F  LI G       D   E+   M  RG+  D   +  ++ +  
Sbjct: 440 QFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLC 499

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           +KG   +AK   D M+  G  P ++ + ++++    DG++  A +++  MV  GVK +  
Sbjct: 500 KKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDV 559

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKL 573
               I+      G +E+ L  +  M   G  P    ++ LL  L + G+T+AA +L
Sbjct: 560 TYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 615



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/464 (23%), Positives = 212/464 (45%), Gaps = 12/464 (2%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK--QLGVERSVKSYDALFKL 135
           +L  MP+ G + D   + +L++        Q+++ +  IM   +      V +Y  +   
Sbjct: 158 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 217

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           +LR G+   A   F+ ML  G  P   TY+ ++     +  ++ A + F  M   G+  D
Sbjct: 218 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 277

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
            + Y ++++GY    K  EA  +F +M    +EP V++YT ++       ++ +A +IFD
Sbjct: 278 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 337

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
            +     KP++ TY  LL G    G +VE+  +L  M+++ +    + +F  ++G   K 
Sbjct: 338 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGM-QLGHHIFNMIMGAYAKH 396

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
             ++ A  V   M +  +  +  +YG +++  C A   D A+   + L  K   L P   
Sbjct: 397 NKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSL--KSEGLAPNIV 454

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
           +      +  +I  LC   +  K E    +++ +G+ LD + FN ++    K+G    A 
Sbjct: 455 V------FTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAK 508

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +  +M R G+  + + Y  LI+ Y   G+  +A   L  M+ +G  P+   + +++   
Sbjct: 509 NLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGY 568

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            ++GR++    +++ M  KGV   +     +L+ L   G    A
Sbjct: 569 SQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAA 612



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 114/252 (45%), Gaps = 36/252 (14%)

Query: 79  LLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           LLD M KKG+Q    +F +++ +Y K   V E++ +F  M+Q G+   + +Y  +  ++ 
Sbjct: 370 LLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILC 429

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
             GR   A   FN + SEG+ P    +  ++ G     K +       +M  RGI LD +
Sbjct: 430 TAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTI 489

Query: 198 -----------------------------------TYNTMINGYNRFKKMDEAEKLFAEM 222
                                              TYNT+I+GY    KMDEA KL   M
Sbjct: 490 FFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVM 549

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
               ++P+ ++Y T+I GY    R +D L +  EM    V P  VTY  LL GL  AG+ 
Sbjct: 550 VFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRT 609

Query: 283 VEVQKVLREMVE 294
           V  +++   M++
Sbjct: 610 VAAKELYLRMIK 621



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 167/409 (40%), Gaps = 48/409 (11%)

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK--PNAVTYTALLPGLCDAG-KMVEV 285
           P + +Y  +I     + R D A      + +  ++  PN +  ++  P LC AG + + +
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGP-LCTAGGRAMRM 155

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI--RLSIPTEAGHYGIL 343
             VLR M E    P   S  + L G+ C       A D+L  M   +   P +   Y  +
Sbjct: 156 DIVLRRMPELGCKPDLFSYTILLKGL-CDDKTSQQALDLLHIMADHKGRCPLDVVAYTTV 214

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I    +    D+A  L D ++++     P      +  +Y+ +I  L       KA   F
Sbjct: 215 INGLLREGQLDKAYSLFDAMLDRG----PSP----DVVTYSSIISALSKTQAMDKATQVF 266

Query: 404 RQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
            +++K GV+ D + + +L+ G+   G P  A  I K M R GV  D   Y  L++   + 
Sbjct: 267 TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKN 326

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G+  +A+   DS+++ GH P S+ + +++     +G +     ++  M++KG++    + 
Sbjct: 327 GKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIF 386

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
             I+ A      V+EAL     M Q G  P                              
Sbjct: 387 NMIMGAYAKHNKVDEALLVFSNMRQQGLNP------------------------------ 416

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
             D+ +Y  VLD L  AG+  +A S    +  +G   +      LI GL
Sbjct: 417 --DIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGL 463



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 127/250 (50%), Gaps = 12/250 (4%)

Query: 20  QFDHNLVYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
           Q  H+ ++N++ GA       + AL  F  + + GL N D   +  +++IL   G+++ A
Sbjct: 380 QLGHH-IFNMIMGAYAKHNKVDEALLVFSNMRQQGL-NPDIVNYGTVLDILCTAGRVDDA 437

Query: 76  RCILLDMPKKGVQWDEDMFEVLIE---SYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
                 +  +G+  +  +F  LI    +  K   V+E    F+++ + G+      ++A+
Sbjct: 438 LSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELA--FEMIDR-GICLDTIFFNAI 494

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + ++GR + AK  F+ M+  GIEP  +TYN ++ G+ L  K++ A++    M   G+
Sbjct: 495 MGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGV 554

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
               VTYNT+INGY++  ++++   L  EM  K + P +++Y  +++G     R   A  
Sbjct: 555 KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKE 614

Query: 253 IFDEMKSFDV 262
           ++  M  +D 
Sbjct: 615 LYLRMIKWDT 624


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 139/571 (24%), Positives = 252/571 (44%), Gaps = 51/571 (8%)

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V + + L   +   G +  A+    KM S  I  +  TYN +L  +    + + A+   E
Sbjct: 226 VTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISNSV-TYNTILHWYVKKGRFKAALCVLE 284

Query: 186 DMKSRGISLDVVTY-----------------------------------NTMINGYNRFK 210
           DM+   +  DV TY                                   NT+ING+ R  
Sbjct: 285 DMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREG 344

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           K++ A  +F  M  +N+ P+V +YTTMI GY    R D AL I  EM+   V P+ +TY+
Sbjct: 345 KINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYS 404

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           ALL G C    +     ++ ++  R I   + ++   L+   C+ G ++ A  +LK+M  
Sbjct: 405 ALLNGYCKVSMLGPAIYLMEDLKSRGI-TINKTMRTILIDGFCQVGEISKAKQILKSMFE 463

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             I  +   Y  LI   C+        ++L ++ +  I+  P   L      Y  +I + 
Sbjct: 464 DGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGIL--PNDVL------YTTLICYY 515

Query: 391 CHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C  G   +A   F  + ++G V +PV  N L+    +EG    A    + M R  +  D+
Sbjct: 516 CKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDS 575

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
            ++  +I+SY  +G    A +  D M+  G+SP    +++++  L + G +  A + M  
Sbjct: 576 VSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSC 635

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGK 566
           +++     +      +L  +   G ++EAL   + M+++  +P+  +   LLS    KGK
Sbjct: 636 LLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGK 695

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSD 625
            + A+ +L   L +  + D  +Y  +L+ L+  G+   A  +  +I+ K G+  D  + +
Sbjct: 696 ILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYN 755

Query: 626 KLIAGLNQEGNTKQAD-ILSRMIRGEMSRGS 655
            L+ G  +  N      ++S M + E+   S
Sbjct: 756 SLMNGYLKSRNVNTIKRMMSDMYQNEVYPNS 786



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 259/591 (43%), Gaps = 14/591 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  MI+ L R+ +   A  +L  M K  +  DE  +  LI  + ++G +  +  +F
Sbjct: 294 DVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVF 353

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M +  +  SV +Y  +     R  R   A    ++M   G+ P+  TY+ +L G+   
Sbjct: 354 NHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKV 413

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L  AI   ED+KSRGI+++      +I+G+ +  ++ +A+++   M E  I+P VI+Y
Sbjct: 414 SMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITY 473

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I G   + +  +   I   M+   + PN V YT L+   C AG + E  K   ++  
Sbjct: 474 SALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYR 533

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R +   +  +   LL    + G +  A    + M R++I  ++  +  +I+++C      
Sbjct: 534 RGL-VANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIV 592

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLD 413
            A  + D +V        +        +Y  +++ LC  G   +A  F   L+     +D
Sbjct: 593 GAFSVYDDMV--------RYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAID 644

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              FN L+ G  + G  D A ++ + M +     D   Y  L+  + RKG+   A   L 
Sbjct: 645 EKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQ 704

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK-GVKENLDLVAKILEALLMR 532
            M+E G  P +  +  ++  L  +G+V+ AS V   ++ K G+  +      ++   L  
Sbjct: 705 MMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKS 764

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
            +V      +  M Q+   PN   ++ L+    ++G+   ++ L  + + +    D  +Y
Sbjct: 765 RNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTY 824

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             ++  L   G    A   L K++ +G   D    D LI   +++     A
Sbjct: 825 RLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNA 875



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 136/631 (21%), Positives = 269/631 (42%), Gaps = 51/631 (8%)

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            T+  ++    +V  L  A  ++ D+  +G+  ++ M  +LI+ + + G + ++ +I   M
Sbjct: 402  TYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSM 461

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
             + G++  V +Y AL   + R  +    K   ++M   GI P    Y  ++  +  +  +
Sbjct: 462  FEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYV 521

Query: 178  ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            + A++ F D+  RG+  + V +N +++ + R   + EAE     M   NI    +S+  +
Sbjct: 522  KEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRI 581

Query: 238  IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
            I  Y        A  ++D+M  +   PN  TY  LL GLC  G +V+ ++ +  +++  I
Sbjct: 582  IDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLD--I 639

Query: 298  P-PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
            P   D   F  LL   C+ G L+ A D+ + MI+ +   +   Y IL+  FC+      A
Sbjct: 640  PFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPA 699

Query: 357  IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL--DP 414
            + +L  ++EK ++  P +       +Y  ++  L + GQ   A   F +++ K  L  D 
Sbjct: 700  LVILQMMLEKGVV--PDTV------AYTCLLNGLINEGQVKAASYVFHEIICKEGLYADC 751

Query: 415  VAFNNLI-----------------------------------RGHSKEGNPDSAFEIVKI 439
            +A+N+L+                                    G+ K G    +  + K 
Sbjct: 752  IAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKY 811

Query: 440  MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
            M R+G+  D   Y  LI      G    A   L+ M+ +G  P   +F  ++ +  E  +
Sbjct: 812  MVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSK 871

Query: 500  VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
            +  A +V   M    +  +    + ++  L+ +G+++ +   +  M+Q G  PN    ++
Sbjct: 872  MHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIA 931

Query: 560  VLSEK---GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
            +++ K   G+   A +L +       +    +   ++  L   GK   A  +   +M  G
Sbjct: 932  LVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSG 991

Query: 617  GVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
             V    +   L+  L +E     A  L R++
Sbjct: 992  MVPTVATFTTLMHSLCKESKIADALHLKRLM 1022



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 218/498 (43%), Gaps = 52/498 (10%)

Query: 58   THLKMIEILGRVGKLNHAR---CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
            T+  ++  L + G L  AR     LLD+P      DE  F  L+    + G + E++ + 
Sbjct: 612  TYQNLLRGLCQGGHLVQARQFMSCLLDIP---FAIDEKTFNALLLGICRYGTLDEALDLC 668

Query: 115  DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            + M +      + +Y  L     R+G+ + A      ML +G+ P    Y  +L G    
Sbjct: 669  EKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINE 728

Query: 175  LKLETAIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
             +++ A   F ++  + G+  D + YN+++NGY + + ++  +++ ++M +  + P   S
Sbjct: 729  GQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSAS 788

Query: 234  YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
            Y  ++ GYV   +   +L ++  M    ++P+ VTY  L+ GL + G +    K L +MV
Sbjct: 789  YNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMV 848

Query: 294  ERYIPPKDNSVF----------------------MKLLGVQCKS-------------GHL 318
               I P D  VF                      MK L +   S             G+L
Sbjct: 849  LEGIFP-DRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYL 907

Query: 319  NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            + +  VL  M+++ +     HY  L+   C+    DRA +L +++  K I + P    + 
Sbjct: 908  DHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEM--KAIGIVPAEVAE- 964

Query: 379  EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIV 437
                 + +I+ LC  G+  +A I F  +M+ G++  VA F  L+    KE     A  + 
Sbjct: 965  -----SSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLK 1019

Query: 438  KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
            ++M    +  D  +Y  LI    +    +DA      M   G  P  + + ++  +++  
Sbjct: 1020 RLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYST 1079

Query: 498  GRVQTASRVMKSMVEKGV 515
            GRVQ    +++ + E+G+
Sbjct: 1080 GRVQNGEELLEDIEERGL 1097



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 149/318 (46%), Gaps = 40/318 (12%)

Query: 21   FDHNLVYNVL-HG-AKNSEHA--LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
            + ++  YN+L HG  K  + +  L  ++++ R G+   D  T+  +I  L   G ++ A 
Sbjct: 783  YPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGI-RPDNVTYRLLILGLSECGLIDIAV 841

Query: 77   CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
              L  M  +G+  D  +F++LI ++ +K  +  ++++F+ MK L +  S K++ A+   +
Sbjct: 842  KFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGL 901

Query: 137  LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            +R+G    + +  ++ML  G++P    Y  ++       +++ A R  E+MK+ GI    
Sbjct: 902  IRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAE 961

Query: 197  VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV------------------------- 231
            V  +++I G  R  K++EA  +F+ M    + PTV                         
Sbjct: 962  VAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRL 1021

Query: 232  ----------ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
                      +SY  +I G    +   DAL ++ EMKS  + PN  TY  L   +   G+
Sbjct: 1022 MELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGR 1081

Query: 282  MVEVQKVLREMVERYIPP 299
            +   +++L ++ ER + P
Sbjct: 1082 VQNGEELLEDIEERGLIP 1099


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 145/643 (22%), Positives = 278/643 (43%), Gaps = 60/643 (9%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  +L   KN   AL  F  V R   ++H       +++ L     + H   I+  +  +
Sbjct: 13  VIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQ 72

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMM 144
             +  ED+   +I++Y K  +  +++ IF  M ++ G +  ++SY++L   ++   ++  
Sbjct: 73  KCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDE 132

Query: 145 AKRYFNKMLSEGIEPTRHTYNVM-------------------LW--GFFLSL-------- 175
           A+ +F    + G+ P   TYN++                   +W  GF   +        
Sbjct: 133 AESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN 192

Query: 176 ------KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD--EAEKLFAE-MKEKN 226
                  +  A++ F++M  RG++ DV  YN +I+G+  FKK D   A +++   +K  +
Sbjct: 193 SLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGF--FKKGDILNASEIWERLLKGPS 250

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           + P + SY  MI G     + D++  I+  MK  +   +  TY+ L+ GLC +G +    
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           +V +EM E  + P D  V+  +L    ++G +    ++ K M +    T    Y ILI  
Sbjct: 311 RVYKEMAENGVSP-DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRG 368

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQ 405
             +    D AI + + L EK+           ++ +Y  ++  LC NG   KA  I    
Sbjct: 369 LFENAKVDEAISIWELLPEKDCC--------ADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 406 LMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
              +G LD  A++++I G  +EG  D    ++  M + G   +      +I  ++R  + 
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            DA     +M+  G  P    + +++  L +  R   A  ++K M+ KG K N+   + +
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL 540

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           +  L     ++ AL      ++ G  P+    + ++  L   GK   A++L      R C
Sbjct: 541 MNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKC 600

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           + +L ++  +++          A  I   I++      W SS+
Sbjct: 601 VPNLVTHNTLMEGFYKVRDFERASKIWDHILQ-----SWSSSN 638



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 234/534 (43%), Gaps = 15/534 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L  +   + A  FF + E  GL + + +T+  +I+I  R  + + A+ +L  M
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGL-SPNLQTYNILIKISCRKKQFDKAKELLNWM 175

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++G   D   +  LI S  K G + +++K+FD M + GV   V  Y+ L     ++G  
Sbjct: 176 WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI 235

Query: 143 MMAKRYFNKML-SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           + A   + ++L    + P   +YNVM+ G     K + +   +  MK      D+ TY+T
Sbjct: 236 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G      +D A +++ EM E  + P V+ Y TM+ GY+   R ++ L ++  M+   
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +   V+Y  L+ GL +  K+ E   +   + E+     D+  +  L+   CK+G+LN A
Sbjct: 356 CR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDC-CADSMTYGVLVHGLCKNGYLNKA 413

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +L+         +   Y  +I   C+    D    +LD++ +      P         
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC------ 467

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIM 440
             N +I       +   A  FF  ++ KG     V +N LI G SK      A+ +VK M
Sbjct: 468 --NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 441 GRRGVPRDADAYICLIESYLRKGEPAD-AKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
             +G   +   Y  L+   L +G+  D A       +E G  P   +   ++  L   G+
Sbjct: 526 LHKGWKPNMITYSLLMNG-LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           V+ A ++   M ++    NL     ++E        E A    D ++QS S  N
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638


>gi|361066399|gb|AEW07511.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143970|gb|AFG53474.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143972|gb|AFG53475.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143974|gb|AFG53476.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143976|gb|AFG53477.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143978|gb|AFG53478.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143980|gb|AFG53479.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143982|gb|AFG53480.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143984|gb|AFG53481.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143986|gb|AFG53482.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143988|gb|AFG53483.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143990|gb|AFG53484.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143994|gb|AFG53486.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143996|gb|AFG53487.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
 gi|383143998|gb|AFG53488.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
          Length = 153

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/153 (53%), Positives = 107/153 (69%)

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D++ Y  LIES+LRKG PA+AK  LD M+E GH P +S FRSV++ L+ DGR QTASRVM
Sbjct: 1   DSETYNVLIESFLRKGLPAEAKYTLDKMMEIGHLPTASTFRSVIDGLYSDGRFQTASRVM 60

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKT 567
           K M+EK +KEN DL+  ILE LL RGHVEE + R++LM   G  P+ + L + L EKGK+
Sbjct: 61  KCMLEKDIKENFDLIPNILETLLDRGHVEEVIDRLELMFVKGCAPDLNKLSNGLCEKGKS 120

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
             A +LL F L ++C I  A+Y+ VL+ L A G
Sbjct: 121 FTACQLLQFALQKNCNIKAATYDTVLNGLCADG 153



 Score = 45.4 bits (106), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 3/154 (1%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D + + VLIES+ +KG+  E+    D M ++G   +  ++ ++   +   GR+  A R  
Sbjct: 1   DSETYNVLIESFLRKGLPAEAKYTLDKMMEIGHLPTASTFRSVIDGLYSDGRFQTASRVM 60

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
             ML + I+        +L        +E  I   E M  +G + D+   N + NG    
Sbjct: 61  KCMLEKDIKENFDLIPNILETLLDRGHVEEVIDRLELMFVKGCAPDL---NKLSNGLCEK 117

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
            K   A +L     +KN      +Y T++ G  A
Sbjct: 118 GKSFTACQLLQFALQKNCNIKAATYDTVLNGLCA 151



 Score = 42.7 bits (99), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 4/154 (2%)

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D  TYN +I  + R     EA+    +M E    PT  ++ ++I G  +  R   A R+ 
Sbjct: 1   DSETYNVLIESFLRKGLPAEAKYTLDKMMEIGHLPTASTFRSVIDGLYSDGRFQTASRVM 60

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
             M   D+K N      +L  L D G + EV   L  M  +   P  N    KL    C+
Sbjct: 61  KCMLEKDIKENFDLIPNILETLLDRGHVEEVIDRLELMFVKGCAPDLN----KLSNGLCE 116

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
            G    A  +L+  ++ +   +A  Y  ++   C
Sbjct: 117 KGKSFTACQLLQFALQKNCNIKAATYDTVLNGLC 150


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/523 (22%), Positives = 244/523 (46%), Gaps = 46/523 (8%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + +L P    +L+  VL+  ++   AL+FF       +     + +  +I +L     L+
Sbjct: 25  LSSLTPD---SLITTVLN-CRSPWKALEFFNAAPEKNI-----QLYSAIIHVLVGSKLLS 75

Query: 74  HARCILLDMPK----------------------KGVQWDEDMFEVLIESYGKKGIVQESV 111
           HAR +L D+ +                      K  ++  +++  LI    K  +V+E++
Sbjct: 76  HARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEAL 135

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            ++    ++G   ++++ + L  ++++ GR+ +  R + +M+S G+ P+  T+  ++ G 
Sbjct: 136 SMY---HKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGC 192

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
                L  A   F++M+ +GI   V+ Y  +I G     K++EAE +   M+E  + P V
Sbjct: 193 CRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNV 252

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +Y T++ GY  +  A  ALR++ +M    + P+ VT+  L+ GLC  G+M   + +   
Sbjct: 253 YTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVN 312

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M++  + P + +V+  L+   CK G ++ A  +   + R  +  +   Y ILI   C   
Sbjct: 313 MIKFSVTP-NIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVS 371

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             + A  + +K+ ++ I+          + +YN +I   C  G+  KA     Q+ + GV
Sbjct: 372 RTEEAGNIFEKMTKEGIL--------ANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423

Query: 412 LDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
            +P  + F+ LI G+ K  N  +A  I   M  + +  D   Y  +I+ + + G   +A 
Sbjct: 424 -EPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEAL 482

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
                M+++G +P       +++ L +DG++  A  +    +E
Sbjct: 483 KLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIE 525



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 215/471 (45%), Gaps = 35/471 (7%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   R G L  A+ +  +M  KG+     ++ +LI        ++E+  +   M+++G
Sbjct: 188 LIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVG 247

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  +V +Y+ L     +      A R +  ML EG+ P   T+ +++ G     +++ A 
Sbjct: 248 VYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAAR 307

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F +M    ++ ++  YN++I+ Y +   + EA  LF E++   + P V +Y+ +I+G 
Sbjct: 308 NLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGL 367

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
            +V R ++A  IF++M    +  N+VTY +L+ G C  GKM +  ++  +M E  + P +
Sbjct: 368 CSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEP-N 426

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  L+   CK  +L AA  +   M+  S+  +   Y  +I+  CK      A+KL  
Sbjct: 427 VITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYS 486

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQL-------------M 407
            +++  I   P         + + ++  LC +G+   A E+F  ++              
Sbjct: 487 DMLDNGI--TPN------CYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGS 538

Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES-----YLRK 462
           K  + + VA+  LI G  ++G    A ++   M R G+  D   Y+ ++       Y+  
Sbjct: 539 KPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILM 598

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
              AD       M++ G  P S++   + E   E G +++A    K + E 
Sbjct: 599 MLHAD-------MLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEEN 642



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 196/450 (43%), Gaps = 25/450 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++ +L + G+      I  +M   G+      F  LI+   ++G +  + ++FD M+  G
Sbjct: 153 LLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKG 212

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V  Y  L + +    +   A+     M   G+ P  +TYN ++ G+      + A+
Sbjct: 213 IVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQAL 272

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R ++DM   G+  DVVT+  +I+G  +F +M  A  LF  M + ++ P +  Y ++I  Y
Sbjct: 273 RLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAY 332

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             V    +A+ +F E++ F+V P+  TY+ L+ GLC   +  E   +  +M +  I    
Sbjct: 333 CKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILA-- 390

Query: 302 NSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           NSV +  L+   CK G ++ A ++   M    +      +  LI+ +CK      A+ + 
Sbjct: 391 NSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIY 450

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
            ++V K        +L  +  +Y  MI   C  G   +A   +  ++  G+  +    + 
Sbjct: 451 SEMVIK--------SLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISC 502

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPR---DAD----------AYICLIESYLRKGEPA 466
           L+ G  K+G    A E+         PR   DA           AY  LI    + G+ +
Sbjct: 503 LLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFS 562

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFE 496
            A      M   G  P   ++  ++  LF+
Sbjct: 563 KAVKLFSDMRRYGLQPDEVIYVVMLRGLFQ 592



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 161/331 (48%), Gaps = 28/331 (8%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N++ AL+ ++ +   GL   D  T   +I+ L + G++  AR + ++M K  V  +  ++
Sbjct: 267 NAKQALRLYQDMLGEGLV-PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVY 325

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             LI++Y K G V E++ +F  +++  V   V +Y  L + +    R   A   F KM  
Sbjct: 326 NSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTK 385

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
           EGI     TYN ++ G     K++ A+     M   G+  +V+T++T+I+GY + + +  
Sbjct: 386 EGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQA 445

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A  +++EM  K++ P V++YT MI G+       +AL+++ +M    + PN  T + LL 
Sbjct: 446 AMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLD 505

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GLC  GK+ +  ++  E +E   P             +C   +++A           S P
Sbjct: 506 GLCKDGKISDALELFTEKIEFQTP-------------RC---NVDAGG---------SKP 540

Query: 335 TEAGH--YGILIENFCKAEMYDRAIKLLDKL 363
           +   H  Y  LI   C+   + +A+KL   +
Sbjct: 541 SLTNHVAYTALIHGLCQDGQFSKAVKLFSDM 571



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 171/391 (43%), Gaps = 19/391 (4%)

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G +L +   N ++    +  + +   +++ EM    + P+VI++ T+I G     R  D 
Sbjct: 142 GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCC---RQGDL 198

Query: 251 LR---IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           LR   +FDEM+   + P  + YT L+ GLC   K+ E + + R M E  + P +   +  
Sbjct: 199 LRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYP-NVYTYNT 257

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   CK  +   A  + + M+   +  +   +GILI+  CK      A  L   +++  
Sbjct: 258 LMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFS 317

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
           +   P        + YN +I   C  G   +A   F +L +  V  D   ++ LIRG   
Sbjct: 318 V--TPN------IAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCS 369

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
               + A  I + M + G+  ++  Y  LI+   ++G+   A      M E+G  P    
Sbjct: 370 VSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVIT 429

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F ++++   +   +Q A  +   MV K +  ++     +++     G ++EAL     M+
Sbjct: 430 FSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDML 489

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
            +G  PN      LL  L + GK   A++L 
Sbjct: 490 DNGITPNCYTISCLLDGLCKDGKISDALELF 520



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 98/500 (19%), Positives = 190/500 (38%), Gaps = 68/500 (13%)

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+ FF     + I L    Y+ +I+     K +  A  L  ++ +            ++K
Sbjct: 46  ALEFFNAAPEKNIQL----YSAIIHVLVGSKLLSHARYLLNDLVQN-----------LVK 90

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
            +        A      +KS    PN   Y  L+  LC   KM  V++ L  M  +    
Sbjct: 91  SHKPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLC---KMELVEEAL-SMYHKVGAA 144

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
                   LL V  K+G       + + MI   +      +G LI+  C+     RA ++
Sbjct: 145 LTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEM 204

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFN 418
            D++  K I+  P   +      Y  +I+ LC + +  +AE   R + + GV   V  +N
Sbjct: 205 FDEMRVKGIV--PTVIV------YTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYN 256

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L+ G+ K  N   A  + + M   G+  D   +  LI+   + GE   A+    +MI+ 
Sbjct: 257 TLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKF 316

Query: 479 GHSPASSLFRSVMESLFEDG-----------------------------------RVQTA 503
             +P  +++ S++++  + G                                   R + A
Sbjct: 317 SVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEA 376

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             + + M ++G+  N      +++     G +++AL     M ++G  PN   F +L+  
Sbjct: 377 GNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDG 436

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
             +     AA+ +    + +    D+ +Y  ++D     G    A  +   +++ G   +
Sbjct: 437 YCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPN 496

Query: 621 WKSSDKLIAGLNQEGNTKQA 640
             +   L+ GL ++G    A
Sbjct: 497 CYTISCLLDGLCKDGKISDA 516


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 206/435 (47%), Gaps = 10/435 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G+  +     +LI  + +   V     +     +LG++ ++ ++  L   + + G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A   F+ M++ G +P  +TY  ++ G     +   A   F+ M+  G  L+VVTY+T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+   ++++++EA  +F+ MK K+I PT+ +YT++I+G     R  +A  + +EM S +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + PN VT+  L+   C  GK++  + VL+ M E  + P D   +  L+        +  A
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP-DVVTYNSLMYGYSMWTEVVEA 239

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   MI      +   Y ILI  +CKA+  D A +L ++++ +     P +       
Sbjct: 240 RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS--TPNNV------ 291

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIM 440
           SYN +I  LC  G+  +A+  F+ +   G L  +  +  L+ G  K+G    AF + + M
Sbjct: 292 SYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAM 351

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
               +  +   Y  L+ +  + G   DA+     +   G  P   ++ +++  L ++G +
Sbjct: 352 QSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLL 411

Query: 501 QTASRVMKSMVEKGV 515
             A    ++M + G 
Sbjct: 412 DEALEAFRNMEDDGC 426



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 186/396 (46%), Gaps = 10/396 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L ++G+   A  +   M + G Q +   +  LI S  K   V E++ IF
Sbjct: 79  DDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIF 138

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             MK   +  ++ +Y +L + +    R+  A    N+M S  I P   T+NV++  F   
Sbjct: 139 SYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKE 198

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K+  A    + M   G+  DVVTYN+++ GY+ + ++ EA KLF  M  K  +P V SY
Sbjct: 199 GKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSY 258

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I GY   +R D+A ++F+EM      PN V+Y  L+ GLC  G++ E Q + + M  
Sbjct: 259 SILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHT 318

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P   +  + L G  CK G+L  A  + +AM    +      Y IL+   CK+    
Sbjct: 319 NGNLPNLYTYAILLDGF-CKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLK 377

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            A +L  +L    I L+P   +      Y  +I  LC  G   +A   FR +   G   D
Sbjct: 378 DARELFSELF--VIGLQPNVQI------YTTIINGLCKEGLLDEALEAFRNMEDDGCPPD 429

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
             ++N +IRG  +  +   A  ++  M  RG   DA
Sbjct: 430 EFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDA 465



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 196/423 (46%), Gaps = 10/423 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  LG+VGK   A  +  DM  +G Q D+  +  +I    K G    +  +F  M
Sbjct: 47  TFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKM 106

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ++ G + +V +Y  L   + +  R   A   F+ M ++ I PT  TY  ++ G     + 
Sbjct: 107 EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRW 166

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A     +M S  I  +VVT+N +++ + +  K+  AE +   M E  +EP V++Y ++
Sbjct: 167 KEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSL 226

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + GY       +A ++FD M +   KP+  +Y+ L+ G C A ++ E +++  EM+ +  
Sbjct: 227 MYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS 286

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +N  +  L+   C+ G L  A D+ K M           Y IL++ FCK     +A 
Sbjct: 287 TP-NNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAF 345

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA- 416
           +L   +  +   L+P   +      YN ++  +C +G    A   F +L   G+   V  
Sbjct: 346 RLFRAM--QSTYLKPNLVM------YNILVNAMCKSGNLKDARELFSELFVIGLQPNVQI 397

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  +I G  KEG  D A E  + M   G P D  +Y  +I  +L+  + + A   +  M 
Sbjct: 398 YTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457

Query: 477 EDG 479
           + G
Sbjct: 458 DRG 460



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 198/438 (45%), Gaps = 10/438 (2%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M+  G+  +  + + L     +  R  +      K +  G++PT  T+  ++ G     K
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A+  F+DM +RG   D  TY T+ING  +  +   A  LF +M+E   +  V++Y+T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I       R ++AL IF  MK+ D+ P   TYT+L+ GLC+  +  E   +L EM    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P +   F  L+   CK G + AA  VLK M  + +  +   Y  L+  +        A
Sbjct: 181 IMP-NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEA 239

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPV 415
            KL D ++ K    +P      +  SY+ +I   C   +  +A+  F +++ +G   + V
Sbjct: 240 RKLFDVMITKGC--KP------DVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNV 291

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           ++N LI G  + G    A ++ K M   G   +   Y  L++ + ++G    A     +M
Sbjct: 292 SYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAM 351

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                 P   ++  ++ ++ + G ++ A  +   +   G++ N+ +   I+  L   G +
Sbjct: 352 QSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLL 411

Query: 536 EEALGRIDLMMQSGSVPN 553
           +EAL     M   G  P+
Sbjct: 412 DEALEAFRNMEDDGCPPD 429



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 15/185 (8%)

Query: 23  HNLVYNVL-HGAKNSEHALQFFRWVERAGLFNH--------DRETHLKMIEILGRVGKLN 73
           +N+ YN L HG        Q  R  E   LF +        +  T+  +++   + G L 
Sbjct: 289 NNVSYNTLIHGL------CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLG 342

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +   M    ++ +  M+ +L+ +  K G ++++ ++F  +  +G++ +V+ Y  + 
Sbjct: 343 KAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTII 402

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G    A   F  M  +G  P   +YNV++ GF        A+    +M+ RG  
Sbjct: 403 NGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFI 462

Query: 194 LDVVT 198
            D  T
Sbjct: 463 TDAGT 467


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/522 (23%), Positives = 235/522 (45%), Gaps = 20/522 (3%)

Query: 43  FRWVERA-GLFNH-----DRETHLKMIEILGRVGKLNHARCILLDMPKK----GVQWDED 92
           FR ++ A   FNH      R   ++  ++L  + K+ H    ++ + K+    G+  D  
Sbjct: 99  FRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTY 158

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
              +LI  + +   V     +   + +LG++ ++ +++ L   + + G++  A   F+ M
Sbjct: 159 TLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM 218

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           ++ G +P  HTY  ++ G     +   A   F  M   G   DVVTY+T+I+   + +++
Sbjct: 219 VARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRV 278

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +EA  +F+ MK K I P + +Y ++I+G     R  +A  + +EM S ++ PN VT++ L
Sbjct: 279 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLL 338

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +   C  G + E + VL+ M E  + P +   +  L+        +  A  +   MI   
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGVEP-NVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              +   Y ILI  +CKA+    A +L ++++ +         L  +  SYN +I  LC 
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ--------GLTPDIVSYNTLIDGLCQ 449

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+  +A   F+ ++  G L D   ++ L+ G  K+G    AF + + M    +  +   
Sbjct: 450 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 509

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI++  +     +A+     +   G  P   ++ +++  L ++G +  A    ++M 
Sbjct: 510 YNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 569

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           E G   N      I+   L       A+  I  M + G V +
Sbjct: 570 EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/503 (22%), Positives = 226/503 (44%), Gaps = 18/503 (3%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFF-LSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           A  YFN ML     P    +N +L     +    +  I   + M+  G+S D  T + +I
Sbjct: 105 ALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLI 164

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           N + + +++D    + A++ +  ++ T++++ T+I G   V +   A+ +FD+M +   +
Sbjct: 165 NCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQ 224

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+  TYT ++ GLC  G+ V    + R+M E    P D   +  ++   CK   +N A D
Sbjct: 225 PDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQP-DVVTYSTIIDSLCKDRRVNEALD 283

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +   M    I      Y  LI+  C    +  A  +L++++   I+  P         ++
Sbjct: 284 IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIM--PNIV------TF 335

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           + +I   C  G   +A    + + + GV +P  V +++L+ G+S +     A ++  +M 
Sbjct: 336 SLLINIFCKEGNVFEARGVLKTMTEMGV-EPNVVTYSSLMNGYSLQAEVVEARKLFDVMI 394

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            +G   D  +Y  LI  Y +     +AK   + MI  G +P    + ++++ L + GR++
Sbjct: 395 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 454

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV-PN---FDSL 557
            A  + K+M+  G   +L   + +L+    +G++ +A  R+   MQS  + PN   ++ L
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF-RLFRAMQSTYLKPNMVMYNIL 513

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  + +      A KL      +    ++  Y  +++ L   G    A      + E G 
Sbjct: 514 IDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGC 573

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA 640
             +  S + +I G  Q  +  +A
Sbjct: 574 PPNEFSYNVIIRGFLQHKDESRA 596



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/472 (20%), Positives = 187/472 (39%), Gaps = 49/472 (10%)

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT---------------------------- 235
           N  + F+ +D+A   F  M  +   P +I +                             
Sbjct: 94  NDASSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGL 153

Query: 236 --------TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
                    +I  +  ++R D    +  ++    ++   VT+  L+ GLC  GK  +  +
Sbjct: 154 SPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVE 213

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +  +MV R   P D   +  ++   CK G   AAA + + M       +   Y  +I++ 
Sbjct: 214 LFDDMVARGYQP-DVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSL 272

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           CK    + A+ +   +  K I             +YN +IQ LC+  +  +A     ++M
Sbjct: 273 CKDRRVNEALDIFSYMKAKGI--------SPNIFTYNSLIQGLCNFSRWREASAMLNEMM 324

Query: 408 KKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
              ++ + V F+ LI    KEGN   A  ++K M   GV  +   Y  L+  Y  + E  
Sbjct: 325 SLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVV 384

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A+   D MI  G  P    +  ++    +  R+  A ++   M+ +G+  ++     ++
Sbjct: 385 EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 444

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
           + L   G + EA      M+ +G++P+   +  LL    ++G    A +L          
Sbjct: 445 DGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLK 504

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
            ++  Y  ++DA+  +     A  +  ++  +G   + +    +I GL +EG
Sbjct: 505 PNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEG 556



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 36/213 (16%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N++ N    AK    A Q F  +   GL   D  ++  +I+ L ++G+L  A  +  
Sbjct: 403 FSYNILINGYCKAKRIGEAKQLFNEMIHQGL-TPDIVSYNTLIDGLCQLGRLREAHDLFK 461

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-------------------- 120
           +M   G   D   + +L++ + K+G + ++ ++F  M+                      
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 521

Query: 121 ---------------GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
                          G++ +V+ Y  +   + + G    A   F  M  +G  P   +YN
Sbjct: 522 NLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYN 581

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           V++ GF        A++   +M+ +G   DV T
Sbjct: 582 VIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614


>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 193/403 (47%), Gaps = 12/403 (2%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRW-VERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           D+  +   L    +S  A++ F + V R    N   +    MI  LGR+GK+  A+ +  
Sbjct: 155 DYTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFD 214

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
              K+G       F  LI +YG+ G   E++K+FD MK  G+  ++ +Y+A+     + G
Sbjct: 215 TALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGG 274

Query: 141 -RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
             +      F+ MLS G++P R T+N +L         E A R F  M  +GI  D+ TY
Sbjct: 275 VEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTY 334

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+++   +  +MD A ++ +EM  KNI P V++Y+TMI GY  V R DDAL +F+EMK 
Sbjct: 335 NTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKF 394

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             V  + V+Y  LL      G+  +   V +EM    I  KD   +  LL    K    +
Sbjct: 395 LGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGI-RKDVVTYNALLAGYGKQYRYD 453

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
               V + M R  +      Y  LI+ + K  +Y  A+++  +          Q+ L  +
Sbjct: 454 EVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREF--------KQAGLKAD 505

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
              Y+ +I  LC NG    +     ++ K+G+  + V +N++I
Sbjct: 506 VVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSII 548



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 137/269 (50%), Gaps = 1/269 (0%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   GVQ D   F  L+    + G+ + + ++F  M   G+++ + +Y+ L   + + G+
Sbjct: 287 MLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQ 346

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             +A    ++M ++ I P   TY+ M+ G+    +L+ A+  F +MK  G+ LD V+YNT
Sbjct: 347 MDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNT 406

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++ Y +  + ++A  +  EM+   I   V++Y  ++ GY    R D+  R+F+EMK   
Sbjct: 407 LLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGR 466

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V PN +TY+ L+      G   E  +V RE  +  +   D  ++  L+   CK+G + ++
Sbjct: 467 VSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKA-DVVLYSALIDALCKNGLVESS 525

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKA 350
             +L  M +  I      Y  +I+ F ++
Sbjct: 526 VTLLDEMTKEGIRPNVVTYNSIIDAFGRS 554



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 180/380 (47%), Gaps = 15/380 (3%)

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + MI+   R  K++ A+ +F    ++    TV +++ +I  Y      ++A+++FD MKS
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLR---EMVERYIPPKDNSVFMKLLGVQCKSG 316
             + PN VTY A++      G  VE +KV+     M+   + P D   F  LL V  + G
Sbjct: 254 NGLMPNLVTYNAVIDACGKGG--VEFKKVVEIFDGMLSNGVQP-DRITFNSLLAVCSRGG 310

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
              AA  +  AM+   I  +   Y  L++  CK    D A +++ ++  K I+  P    
Sbjct: 311 LWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNIL--PNVV- 367

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                +Y+ MI      G+   A   F ++   GV LD V++N L+  ++K G  + A +
Sbjct: 368 -----TYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALD 422

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           + K M   G+ +D   Y  L+  Y ++    + +   + M     SP    + ++++   
Sbjct: 423 VCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYS 482

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
           + G  + A  V +   + G+K ++ L + +++AL   G VE ++  +D M + G  PN  
Sbjct: 483 KGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVV 542

Query: 556 SLLSVLSEKGKTIAAVKLLD 575
           +  S++   G++ +A  ++D
Sbjct: 543 TYNSIIDAFGRSASAQCVVD 562



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 195/423 (46%), Gaps = 51/423 (12%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           + D  T+  +++ + + G+++ A  I+ +MP K +  +   +  +I+ Y K G + +++ 
Sbjct: 328 DQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALN 387

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +F+ MK LGV     SY+ L  +  + GR+  A     +M + GI     TYN +L G+ 
Sbjct: 388 MFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYG 447

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
              + +   R FE+MK   +S +++TY+T+I+ Y++     EA ++F E K+  ++  V+
Sbjct: 448 KQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVV 507

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL-------C---DAGKM 282
            Y+ +I         + ++ + DEM    ++PN VTY +++          C   D+G+ 
Sbjct: 508 LYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGET 567

Query: 283 VEVQK------VLREMVERYIPPKDNSVFMKLLG-----VQCKSGH-----LNAAADVLK 326
             +Q       V++E +E     K+++  +++ G       C++ +     +     V +
Sbjct: 568 TALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQ 627

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL-----------------VEKEII 369
            M  L I      +  ++    + + ++ A  LL++L                   + + 
Sbjct: 628 KMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLMGYRENVW 687

Query: 370 LRPQSTLD----MEASS----YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
           L+ QS  D    M++S+    YN +   L H GQ   A++   +  ++ V + +  ++ +
Sbjct: 688 LQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENIWSDSCL 747

Query: 422 RGH 424
             H
Sbjct: 748 DLH 750



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 122/286 (42%), Gaps = 8/286 (2%)

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
           + V K    RP++ ++   S     +Q +   G+  KA        +  +  P  +  L+
Sbjct: 101 RFVSKLHFGRPKTNMNRHTSVALEALQQVIQYGKDDKALENVLLNFESRLCGPDDYTFLL 160

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC--LIESYLRKGEPADAKTALDSMIEDG 479
           R     G+   A    +   RR   ++    +   +I +  R G+   AK   D+ +++G
Sbjct: 161 RELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEG 220

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE--E 537
           +      F +++ +    G    A +V  SM   G+  NL     +++A   +G VE  +
Sbjct: 221 YGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDAC-GKGGVEFKK 279

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
            +   D M+ +G  P+   F+SLL+V S  G   AA +L    + +    D+ +Y  +LD
Sbjct: 280 VVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLD 339

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           A+   G+   A+ I+ ++  K  + +  +   +I G  + G    A
Sbjct: 340 AVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDA 385


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 238/517 (46%), Gaps = 12/517 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L +   ++ A  +L  M    +Q DE  +  +I  Y   G  +E+ K+F  M
Sbjct: 309 TYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEM 368

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G+   + ++++L   + +  R   A   F+ + ++G +P   +Y+++L G+    + 
Sbjct: 369 TREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRF 428

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                 F  M   GI  D   +N +IN + +   MDEA  +F EM+ + + P V++Y T+
Sbjct: 429 VDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATV 488

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I     + R  DA+    +M S  +KPN V Y +L+ G C  G +++ ++++ EM+++ I
Sbjct: 489 IAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGI 548

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           P  + + F  ++   C  G +  A DV   +I +    +   +  LI+ +C     D+A 
Sbjct: 549 PRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAF 608

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            +LD +V         +  + +  +Y+ +I     +G+     I FR+++ K V    V 
Sbjct: 609 GVLDAMV--------SAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVT 660

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           ++ ++ G  + G   +A ++   M   G       Y  +++   R     +A T    + 
Sbjct: 661 YSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLG 720

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
                   ++  +++ +L++  R + A  +  S+   G+  N      ++  LL  G VE
Sbjct: 721 AMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVE 780

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           EA      M ++G  P+    + ++ +L +KG+ + A
Sbjct: 781 EADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 144/621 (23%), Positives = 268/621 (43%), Gaps = 23/621 (3%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD-MPKKGVQWDE 91
           A+  +    FF  + RAGL      T+   ++ L    + + A  +LL  M + G   D 
Sbjct: 178 ARRPDLGPAFFARLLRAGLRTDGIVTN-TFLKCLCYAKRTDEALSMLLHRMSELGCVPDA 236

Query: 92  DMFEVLIESYGKKGIVQESVK-IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
             +  +I+S       QE++  +  + K  G    V SY  +   +   G    A   FN
Sbjct: 237 FSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFN 296

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +M+ +G+ P   TYN ++     +  ++ A      M    I  D VTY  MI+GY+   
Sbjct: 297 EMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLG 356

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +  EA K+F EM  + + P ++++ +++      +R+ +A  IF  + +   KP+ ++Y+
Sbjct: 357 RWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYS 416

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            LL G    G+ V++  +   M +  I   D+  F  L+    K G ++ A  +   M  
Sbjct: 417 ILLHGYATEGRFVDMNNLFHSMTDNGIV-ADSHCFNILINAHAKRGMMDEALLIFTEMRG 475

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +      Y  +I   C+      A++ L +++   I L+P + +      Y+ +IQ  
Sbjct: 476 QGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS--IGLKPNTVV------YHSLIQGF 527

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEG---NPDSAFEIVKIMGRRGV 445
           C +G   KA+    ++M +G+  P    F+++I     EG   N    F +V  +G R  
Sbjct: 528 CTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDR-- 585

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   +  LI+ Y   G+   A   LD+M+  G  P    + +++   F+ GR+     
Sbjct: 586 -PDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLI 644

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLS 562
           + + M+ K VK      + +L+ L   G    A      M++SG   S+  +  +L  L 
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLC 704

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
               T  A+ L       +   ++A    ++ AL    +   A+ +   +   G V +  
Sbjct: 705 RNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNAS 764

Query: 623 SSDKLIAGLNQEGNTKQADIL 643
           +   +I  L +EG+ ++ADI+
Sbjct: 765 TYGVMIINLLKEGSVEEADIM 785



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/584 (22%), Positives = 237/584 (40%), Gaps = 90/584 (15%)

Query: 78  ILLDMPK-KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
           +LL M K  G   D   + ++I     +G + ++  +F+ M Q GV  +V +Y+++   +
Sbjct: 258 MLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHAL 317

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            +      A+    +M    I+P   TY  M+ G+    + + A + F++M   G+  D+
Sbjct: 318 CKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDI 377

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER---------- 246
           VT+N++++   + K+  EA ++F  +  K  +P +ISY+ ++ GY    R          
Sbjct: 378 VTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHS 437

Query: 247 -------------------------ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
                                     D+AL IF EM+   V PN VTY  ++  LC  G+
Sbjct: 438 MTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGR 497

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           + +  + L +M+   + P +  V+  L+   C  G L  A +++  M+   IP       
Sbjct: 498 LADAMEKLSQMISIGLKP-NTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIP------- 549

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
                                        RP  T       ++ +I  LC+ G+   A+ 
Sbjct: 550 -----------------------------RPNITF------FSSIIHSLCNEGRVMNAQD 574

Query: 402 FFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F  ++  G   D   FN+LI G+   G  D AF ++  M   G   D   Y  LI  Y 
Sbjct: 575 VFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYF 634

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           + G   D       M+     P +  +  V++ LF  GR   A ++   M+E G   ++ 
Sbjct: 635 KSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIS 694

Query: 521 LVAKILEALLMRGHVEEA------LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
               IL+ L      +EA      LG ++L  +   +   ++++  L +  +   A  L 
Sbjct: 695 TYTIILQGLCRNNCTDEAITLFHKLGAMNLKFE---IAILNTMIHALYKVKRREEAHDLF 751

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
                   + + ++Y  ++  LL  G    A  I+F  MEK G 
Sbjct: 752 ASVSASGLVPNASTYGVMIINLLKEGSVEEA-DIMFSSMEKTGC 794



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/324 (19%), Positives = 137/324 (42%), Gaps = 14/324 (4%)

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +P     YGIL++  C+A   D       +L+        ++ L  +    N  ++ LC+
Sbjct: 161 VPLTVHTYGILMDCCCRARRPDLGPAFFARLL--------RAGLRTDGIVTNTFLKCLCY 212

Query: 393 NGQTGKA-EIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-RGVPRDA 449
             +T +A  +   ++ + G V D  ++N +I+          A +++  M +  G   D 
Sbjct: 213 AKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDV 272

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
            +Y  +I     +GE + A    + M++ G  P    + S++ +L +   +  A  V++ 
Sbjct: 273 VSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQ 332

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M +  ++ +      ++      G  +EA      M + G +P+   F+SL+  L +  +
Sbjct: 333 MFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKR 392

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
           +  A ++      +    D+ SY  +L      G+ ++  ++   + + G V D    + 
Sbjct: 393 SKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNI 452

Query: 627 LIAGLNQEGNTKQADILSRMIRGE 650
           LI    + G   +A ++   +RG+
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQ 476



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 96/466 (20%), Positives = 179/466 (38%), Gaps = 75/466 (16%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGL--------CDAGKMVEV---QKVLREMVERY 296
           +DA  +FDE+   D   +       L  L        C     + V    ++ RE     
Sbjct: 100 EDAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAGPR 159

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P     +  L+   C++   +        ++R  + T+       ++  C A+  D A
Sbjct: 160 VVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEA 219

Query: 357 IK-LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP- 414
           +  LL ++ E   +  P      +A SYN +I+ LC   ++ +A     ++ K     P 
Sbjct: 220 LSMLLHRMSELGCV--P------DAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPD 271

Query: 415 -VAFNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPR------------------------- 447
            V++  +I G   EG    A  +   M ++G VP                          
Sbjct: 272 VVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLR 331

Query: 448 ---------DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
                    D   Y  +I  Y   G   +A      M  +G  P    F S+M+SL +  
Sbjct: 332 QMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHK 391

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR-IDL------MMQSGSV 551
           R + A+ +  S+  KG K ++     I  ++L+ G+  E  GR +D+      M  +G V
Sbjct: 392 RSKEAAEIFHSIATKGHKPDI-----ISYSILLHGYATE--GRFVDMNNLFHSMTDNGIV 444

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
            +   F+ L++  +++G    A+ +     G+    ++ +Y  V+ AL   G+  +A   
Sbjct: 445 ADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEK 504

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGN-TKQADILSRMIRGEMSR 653
           L +++  G   +      LI G    G+  K  +++S M+   + R
Sbjct: 505 LSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPR 550


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 149/672 (22%), Positives = 287/672 (42%), Gaps = 97/672 (14%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I      G +  A+  L  +   G+  D   +   +  Y + G++  + ++F +M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G  R+  +Y AL   +L  G    A   F  M ++   P  H Y  M+ G   + + 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A    E+  S G   ++V YN +I+GY    +M+ A K+F  M      P V +YT +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G     + + A+ +F  M    ++PN VTYTAL+ G C+ G +    ++L  M    +
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 298 PPKDNS----------------------------------VFMKLLGVQCKSGHLNAAAD 323
            P D +                                  V+  L+   CK+G ++AA +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI-------------IL 370
           +++ MI      +A  Y  LI+  C+ +   +A  +L+ ++EK I             ++
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 371 R------PQSTLD-MEASSYNP-------MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           R      P+   D M A+  NP        ++  C  G+   AE    Q++ +GV  + V
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK------------G 463
            +N LIRG++  G    AF   ++M  +G   + D+Y  L+   ++K             
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIA 553

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           +  D +  L+ + E     A+ ++   +  L    R++ A      M    +  + D+  
Sbjct: 554 DMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGR 580
            I++       + +AL  +D M +SG +P+ +S   ++S L E G    A ++       
Sbjct: 614 SIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFG----- 668

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D ++  ++Y++++  +L           ++ +++KG V ++ S    +  + +E   + +
Sbjct: 669 DLLLKESNYDEIVWKIL-----------IYGLLQKGSVAEFSS----LLSVMKEHGYQPS 713

Query: 641 DILSRMIRGEMS 652
           + ++ MI GE++
Sbjct: 714 NTINAMITGEIT 725



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 229/529 (43%), Gaps = 20/529 (3%)

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
           R++++Y  L       G    AK++   +L  G+ P  + Y   + G+  +  L  A R 
Sbjct: 70  RNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRV 129

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  M  RG      TY  +++G      + EA  +F  M+  +  P    Y TM+ G   
Sbjct: 130 FVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCE 189

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             R ++A  + +E  S   +PN V Y AL+ G C+AG+M    KV   M      P   +
Sbjct: 190 AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            + +L+   CKSG +  A  +   M+   +      Y  LI+  C       A +LL  L
Sbjct: 250 -YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLL-HL 307

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIR 422
           +E   ++    T       ++ +I  LC   +  +A++F   L+KKGV ++ V + +LI 
Sbjct: 308 METNGLVPNDWT-------FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  K G  D+A E+++ M   G   DA +Y  LI+   R+ + + A   L+ M+E G   
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
           +   +  +++ L  +   +   ++   M+  G+  ++      + +    G +E+A   I
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             M+  G  PN   +++L+   +  G    A    +  +G+    +  SY  +L  ++  
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
             + N+  I +KI       D K    L+  + +      ADI S  IR
Sbjct: 541 SSSDNSVDI-WKI------ADMKDLQVLLEDITERQLPLAADIYSCFIR 582



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 129/554 (23%), Positives = 250/554 (45%), Gaps = 61/554 (11%)

Query: 21  FDHNLV-YNVL----HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
           F+ N+V YN L      A   EHAL+ F  ++     + +  T+ ++I  L + GK+  A
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMD-GNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             +   M + G++ +   +  LI+    +G +Q + ++  +M+  G+  +  ++  L   
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           + +R +   A+ +   ++ +G++     Y  ++ G   + K++ A    + M S G   D
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
             +Y+++I+G  R KK+ +A  +  +M EK I+ + ++YT +I   V    ++   +IFD
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           +M +  + P+ VTYT  +   C+ G+M + + ++ +MV+R + P +   +  L+      
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP-NLVTYNTLIRGYANL 505

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL--LDKLVEKEIILR-- 371
           G ++ A    + M+          Y +L+    K    D ++ +  +  + + +++L   
Sbjct: 506 GLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDI 565

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
            +  L + A  Y+  I+ LC   +  +A+ FF   M+   L P                 
Sbjct: 566 TERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMG-MQNANLTP----------------- 607

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
                             D Y  +I+   R     DA T LDSM + G+ P    +R ++
Sbjct: 608 ----------------SEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIII 651

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
            SL E G  +TA  V   ++ K  + N D   +I+  +L+ G           ++Q GSV
Sbjct: 652 SSLCEGGNFRTAKEVFGDLLLK--ESNYD---EIVWKILIYG-----------LLQKGSV 695

Query: 552 PNFDSLLSVLSEKG 565
             F SLLSV+ E G
Sbjct: 696 AEFSSLLSVMKEHG 709



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 212/468 (45%), Gaps = 20/468 (4%)

Query: 182 RFFEDMKS---RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           R F DM+S   R  + ++ TY T+IN Y     +  A++    +    + P   +YT+ +
Sbjct: 55  RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFV 114

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            GY        A R+F  M        A TYTALL GL  AG + E   V   M      
Sbjct: 115 LGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCA 174

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D  V+  ++   C++G    A  +L+  +          Y  LI+ +C A   + A+K
Sbjct: 175 P-DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VA 416
           + + +          +       +Y  +I  LC +G+  +A + F ++++ G L+P  V 
Sbjct: 234 VFEGM--------DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG-LEPNVVT 284

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYICLIESYLRKGEPADAKTALDSM 475
           +  LI+G   EG+   AF ++ +M   G VP D   +  LI++  ++ +  +A+  L S+
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW-TFSVLIDALCKREKVEEAQLFLGSL 343

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           ++ G      ++ S+++ L + G++  A  +M+ M+ +G   +    + +++ L  +  +
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403

Query: 536 EEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
            +A   ++ MM+ G   S   +  ++  L  +  +    K+ D  +      D+ +Y   
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVF 463

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           + +    G+  +A S++ +++++G   +  + + LI G    G   QA
Sbjct: 464 VRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 146/624 (23%), Positives = 287/624 (45%), Gaps = 23/624 (3%)

Query: 28  NVLH-----GAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           NV+H      A + E AL+ F  V R     H  E+   M+E++   G++     +   M
Sbjct: 68  NVVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLM 127

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ ++ +   F  +  + G +G ++ +     +MK+ G+  +  +Y+ L   +++ G  
Sbjct: 128 QRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFD 187

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   +  M ++G+ PT  TY+V++  F      ET +    +M++RG+  +V +Y   
Sbjct: 188 REAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTIC 247

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I    +  +++EA ++  +M+E+  +P V++ T +I+      R  DA  +F +MK+ D 
Sbjct: 248 IRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQ 307

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSV-FMKLLGVQCKSGHLNA 320
           KP+ VTY  LL    D+G    V ++   +  + Y    DN V +   +   C+ G ++ 
Sbjct: 308 KPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGY---NDNVVSYTAAVDALCQVGRVDE 364

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A DV   M +  I  +   Y  LI  F KA+ ++RA++L + +     I  P        
Sbjct: 365 ALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMN----IHGPTPN----G 416

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            ++   I +   +G++ KA   +  +  KG++ D VA N ++ G +K G    A  +   
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHE 476

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +   G+  D   Y  +I+   +     +A      MIE+  +P      S+++ L++ GR
Sbjct: 477 LKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGR 536

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
              A ++   + E  ++        +L  L   G V+E +  ++ M  +   PN   +++
Sbjct: 537 GNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNT 596

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           +L  L + G+   A+ +L       C+ DL+SY  V+  L+   +   A+  +F  M+K 
Sbjct: 597 VLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAF-WMFCQMKKV 655

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQA 640
              D+ +   ++    + G  K+A
Sbjct: 656 LAPDYATVCTILPSFVRSGLMKEA 679



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 144/662 (21%), Positives = 274/662 (41%), Gaps = 68/662 (10%)

Query: 21   FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
            + H L  N    +  S  AL+ +  ++  G+   D      ++  L + G+L  A+ +  
Sbjct: 417  YTHVLFINYHGKSGESLKALKRYELMKSKGIV-PDVVAGNAVLYGLAKTGRLGMAKRVFH 475

Query: 81   DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            ++   G+  D   + ++I+   K     E++KIF  M +      V + ++L  ++ + G
Sbjct: 476  ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAG 535

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
            R   A + F ++    +EPT  TYN +L G     K++  ++  E M S     +++TYN
Sbjct: 536  RGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYN 595

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            T+++   +  +++ A  +   M      P + SY T++ G V  +R D+A  +F +MK  
Sbjct: 596  TVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV 655

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL-------GVQ- 312
             + P+  T   +LP    +G M E    +RE + +     D S    L+       G + 
Sbjct: 656  -LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEK 714

Query: 313  ---------------------------CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
                                       CK     AA +++K    L +  + G Y  LI 
Sbjct: 715  SIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALIC 774

Query: 346  NFCKAEMYDRAIKLLDKL----------------------VEKEIILRPQSTLDMEAS-- 381
                 ++ D A +L  ++                      +  E +L+ Q  +  +    
Sbjct: 775  GLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKS 834

Query: 382  ---SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
               +YN +I  L  +    +A   + QLM +G    P  +  L+ G  K+GN + A  + 
Sbjct: 835  TYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALF 894

Query: 438  KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
              M   G   +   Y  L+  Y   G+        +SM+E G +P    +  V+++L  D
Sbjct: 895  DEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 954

Query: 498  GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
            GR+       K + + G++ +L     ++  L   G +EEAL   + M + G  PN   +
Sbjct: 955  GRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTY 1014

Query: 555  DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            +SL+  L + GK   A K+ +  L +    ++ +Y  ++     +G   NA++   +++ 
Sbjct: 1015 NSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIV 1074

Query: 615  KG 616
             G
Sbjct: 1075 GG 1076



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 147/636 (23%), Positives = 278/636 (43%), Gaps = 43/636 (6%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P  + + +   VL  A   E A +  R +E  G    D  T+  +I+IL   G+L 
Sbjct: 235 RGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGC-KPDVVTNTVLIQILCDAGRLA 293

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A+ +   M     + D   +  L++  G  G  +   +I++ +K  G   +V SY A  
Sbjct: 294 DAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAV 353

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + GR   A   F++M  +GI P +++YN ++ GF  + +   A+  F  M   G +
Sbjct: 354 DALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPT 413

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            +  T+   IN + +  +  +A K +  MK K I P V++   ++ G     R   A R+
Sbjct: 414 PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRV 473

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F E+K+  + P+ +TYT ++     A    E  K+  EM+E    P D      L+ +  
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAP-DVLAMNSLIDMLY 532

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K+G  N A  +   +  +++      Y  L+    +       ++LL+ +        P 
Sbjct: 533 KAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSF---PP 589

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDS 432
           + +     +YN ++  LC NG+   A ++ +   M   + D  ++N ++ G  KE   D 
Sbjct: 590 NII-----TYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDE 644

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           AF +   M +   P D      ++ S++R G     K AL ++ E    P S + RS + 
Sbjct: 645 AFWMFCQMKKVLAP-DYATVCTILPSFVRSGL---MKEALHTVREYILQPDSKVDRSSVH 700

Query: 493 SLFEDGRVQTASRVMKSMVEKGVK--ENLDLVAKILEALLMRGHV------EEALGRIDL 544
           SL E         + +   EK ++  EN+     +L+ L +   +      +EAL   +L
Sbjct: 701 SLME-------GILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHEL 753

Query: 545 M---------MQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           +         +++GS   +++L+  L ++     A +L        C  D  +Y  +LDA
Sbjct: 754 VKKFENLGVSLKTGS---YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           +  + +  +   I  ++  KG  + + + + +I+GL
Sbjct: 811 MGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGL 846



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 168/349 (48%), Gaps = 13/349 (3%)

Query: 108  QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
             E VK F+    LGV     SY+AL   ++      +A+  F++M   G +P   TY+++
Sbjct: 751  HELVKKFE---NLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLI 807

Query: 168  LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
            L     S+++E  ++  E+M ++G     VTYNT+I+G  + K +DEA  L+ ++  +  
Sbjct: 808  LDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGF 867

Query: 228  EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
             PT  +Y  ++ G +     +DA  +FDEM     +PN   Y  LL G   AG   +V +
Sbjct: 868  SPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCE 927

Query: 288  VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
            +   MVE+ + P D   +  ++   C  G LN      K +  + +  +   Y +LI   
Sbjct: 928  LFESMVEQGMNP-DIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGL 986

Query: 348  CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
             K+   + A+ L + + +K I   P         +YN +I +L   G+  +A   + +L+
Sbjct: 987  GKSGRLEEALSLYNDMEKKGIA--PN------LYTYNSLILYLGKAGKAAEAGKMYEELL 1038

Query: 408  KKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             KG    V  +N LIRG+S  G+P++AF     M   G   ++  Y+ L
Sbjct: 1039 AKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 126/250 (50%), Gaps = 1/250 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N + + L  +K  + A+  +  +   G F+    T+  +++ L + G +  A  +  +M
Sbjct: 839  YNTIISGLVKSKMLDEAINLYYQLMSEG-FSPTPCTYGPLLDGLLKDGNIEDAEALFDEM 897

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + G + +  ++ +L+  Y   G  ++  ++F+ M + G+   +KSY  +   +   GR 
Sbjct: 898  LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRL 957

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 YF ++   G+EP   TYN+++ G   S +LE A+  + DM+ +GI+ ++ TYN++
Sbjct: 958  NDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSL 1017

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I    +  K  EA K++ E+  K  +P V +Y  +I+GY      ++A   +  M     
Sbjct: 1018 ILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGC 1077

Query: 263  KPNAVTYTAL 272
            +PN+ TY  L
Sbjct: 1078 RPNSSTYMQL 1087



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 191/451 (42%), Gaps = 39/451 (8%)

Query: 84   KKGVQWDEDMFEVLIESYGKKGIVQE---SVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            KK +  D      ++ S+ + G+++E   +V+ + +     V+RS  S  +L + IL+R 
Sbjct: 653  KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRS--SVHSLMEGILKRD 710

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS------------LKLETAIRFFEDMK 188
                +  +   + S G+         +L   FLS            L     ++ FE++ 
Sbjct: 711  GTEKSIEFAENIASSGL---------LLDDLFLSPIIRHLCKHKEALAAHELVKKFENL- 760

Query: 189  SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
              G+SL   +YN +I G      +D AE+LF+EMK    +P   +Y  ++       R +
Sbjct: 761  --GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIE 818

Query: 249  DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            D L+I +EM +   K   VTY  ++ GL  +  + E   +  +++     P     +  L
Sbjct: 819  DMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTP-CTYGPL 877

Query: 309  LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
            L    K G++  A  +   M+          Y IL+  +  A   ++  +L + +VE+  
Sbjct: 878  LDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQ-- 935

Query: 369  ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
                   ++ +  SY  +I  LC +G+      +F+QL   G+  D + +N LI G  K 
Sbjct: 936  ------GMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKS 989

Query: 428  GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
            G  + A  +   M ++G+  +   Y  LI    + G+ A+A    + ++  G  P    +
Sbjct: 990  GRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTY 1049

Query: 488  RSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             +++      G  + A      M+  G + N
Sbjct: 1050 NALIRGYSVSGSPENAFAAYGRMIVGGCRPN 1080



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 93/182 (51%), Gaps = 1/182 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N++ N    A ++E   + F  +   G+ N D +++  +I+ L   G+LN        +
Sbjct: 909  YNILLNGYRIAGDTEKVCELFESMVEQGM-NPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G++ D   + +LI   GK G ++E++ +++ M++ G+  ++ +Y++L   + + G+ 
Sbjct: 968  TDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKA 1027

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A + + ++L++G +P   TYN ++ G+ +S   E A   +  M   G   +  TY  +
Sbjct: 1028 AEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087

Query: 203  IN 204
             N
Sbjct: 1088 PN 1089


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 187/384 (48%), Gaps = 12/384 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L +   ++ A  +   M K GV  D  M+  L+  Y   G  +E++ IF
Sbjct: 241 DVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIF 300

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M + GVE  V +Y AL   + + G+   A++ F+ ++  G +P   TY  +L G+   
Sbjct: 301 KKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATE 360

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L       + M  +G+ L    +N ++  Y +  K+DEA  +F+ M+++ + P +++Y
Sbjct: 361 GALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNY 420

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++       R DDAL  F+ +KS  + PN V +T L+ GLC   K  +V+++  EM++
Sbjct: 421 GTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMID 480

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R I   D   F  ++G  CK G +  A ++   M+R+ I      Y  LI+ +C     D
Sbjct: 481 RGI-CLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMD 539

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A+KLL  +V   +  +P         +YN +I     NG+        R++  KGV +P
Sbjct: 540 EAMKLLGVMVFNGV--KPSDV------TYNTIINGYSQNGRIEDGLTLLREMDGKGV-NP 590

Query: 415 --VAFNNLIRGHSKEGNPDSAFEI 436
             V +  L++G  + G   +A E+
Sbjct: 591 GIVTYEMLLQGLFQAGRTVAAKEL 614



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 253/546 (46%), Gaps = 22/546 (4%)

Query: 39  ALQFFRWVERAGLFNH--DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           A+  F  + RAG  +   +  T+  +I    R+G+L+ A   +  +   G++    +F  
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139

Query: 97  LIESYGKKGIVQESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS- 154
           L++    +    +++ I    M +LG +  + SY  L K +        A    + M   
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 199

Query: 155 EGIEPTRH-TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           +G  P     Y  ++ G     +L+ A   F+ M  RG S DVVTY+++I+  ++ + MD
Sbjct: 200 KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMD 259

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A ++F  M +  + P  I YT+++ GY +  +  +A+ IF +M    V+P+ VTYTAL+
Sbjct: 260 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 319

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC  GK  E +K+   +V+R   P D++ +  LL      G L    D+L  M++  +
Sbjct: 320 DYLCKNGKSTEARKIFDSLVKRGHKP-DSTTYGTLLHGYATEGALVEMHDLLDLMMKKGM 378

Query: 334 PTEAGH--YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
             + GH  + +++  + K    D A+ +   +         Q  L+ +  +Y  ++  LC
Sbjct: 379 --QLGHHIFNMIMGAYAKHNKVDEALLVFSNM--------RQQGLNPDIVNYGTVLDILC 428

Query: 392 HNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G+   A   F  L  +G+  + V F  LI G       D   E+   M  RG+  D  
Sbjct: 429 TAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTI 488

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +  ++ +  +KG   +AK   D M+  G  P ++ + ++++    DG++  A +++  M
Sbjct: 489 FFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVM 548

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKT 567
           V  GVK +      I+      G +E+ L  +  M   G  P    ++ LL  L + G+T
Sbjct: 549 VFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRT 608

Query: 568 IAAVKL 573
           +AA +L
Sbjct: 609 VAAKEL 614



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 104/465 (22%), Positives = 206/465 (44%), Gaps = 31/465 (6%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK--QLGVERSVKSYDALFKL 135
           +L  MP+ G + D   + +L++        Q+++ +  IM   +      V +Y  +   
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 216

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           +LR G+   A   F+ ML  G  P   TY+ ++     +  ++ A + F  M   G+  D
Sbjct: 217 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 276

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
            + Y ++++GY    K  EA  +F +M    +EP V++YT ++       ++ +A +IFD
Sbjct: 277 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 336

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
            +     KP++ TY  LL G    G +VE+  +L  M+++ +    + +F  ++G   K 
Sbjct: 337 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQ-LGHHIFNMIMGAYAKH 395

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI------- 368
             ++ A  V   M +  +  +  +YG +++  C A   D A+   + L  + +       
Sbjct: 396 NKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVF 455

Query: 369 --ILRPQSTLD------------------MEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
             ++    T D                  ++   +N ++ +LC  G+  +A+  F  +++
Sbjct: 456 TTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR 515

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G+  +   +N LI G+  +G  D A +++ +M   GV      Y  +I  Y + G   D
Sbjct: 516 IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIED 575

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             T L  M   G +P    +  +++ LF+ GR   A  +   M++
Sbjct: 576 GLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/457 (21%), Positives = 173/457 (37%), Gaps = 79/457 (17%)

Query: 180 AIRFFEDMKSRGISL---DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           AI  F  M   G +    ++ TY  +I    R  ++D A      +    +  + I ++ 
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139

Query: 237 MIKGYVAVERADDALRI-FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           ++KG     R  DA+ I    M     KP+  +YT LL GLCD     +   +L  M + 
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 199

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
                                             +   P +   Y  +I    +    D+
Sbjct: 200 ----------------------------------KGRCPLDVVAYTTVINGLLREGQLDK 225

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A  L D ++++     P      +  +Y+ +I  L       KA   F +++K GV+ D 
Sbjct: 226 AYSLFDAMLDRG----PSP----DVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC 277

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           + + +L+ G+   G P  A  I K M R GV  D   Y  L++   + G+  +A+   DS
Sbjct: 278 IMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDS 337

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           +++ GH P S+ + +++     +G +     ++  M++KG++    +   I+ A      
Sbjct: 338 LVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNK 397

Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           V+EAL     M Q G  P                                D+ +Y  VLD
Sbjct: 398 VDEALLVFSNMRQQGLNP--------------------------------DIVNYGTVLD 425

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            L  AG+  +A S    +  +G   +      LI GL
Sbjct: 426 ILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGL 462



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 127/250 (50%), Gaps = 12/250 (4%)

Query: 20  QFDHNLVYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
           Q  H+ ++N++ GA       + AL  F  + + GL N D   +  +++IL   G+++ A
Sbjct: 379 QLGHH-IFNMIMGAYAKHNKVDEALLVFSNMRQQGL-NPDIVNYGTVLDILCTAGRVDDA 436

Query: 76  RCILLDMPKKGVQWDEDMFEVLIE---SYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
                 +  +G+  +  +F  LI    +  K   V+E    F+++ + G+      ++A+
Sbjct: 437 LSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELA--FEMIDR-GICLDTIFFNAI 493

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + ++GR + AK  F+ M+  GIEP  +TYN ++ G+ L  K++ A++    M   G+
Sbjct: 494 MGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGV 553

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
               VTYNT+INGY++  ++++   L  EM  K + P +++Y  +++G     R   A  
Sbjct: 554 KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKE 613

Query: 253 IFDEMKSFDV 262
           ++  M  +D 
Sbjct: 614 LYLRMIKWDT 623


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/602 (22%), Positives = 251/602 (41%), Gaps = 82/602 (13%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           H  K+ + A+ FF ++ R+  F    + + K+I +  R+ + + A  +   M  + +  +
Sbjct: 82  HYFKSLDDAIDFFDYMVRSRPFYTAVDCN-KVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD----------------ALFK 134
              F +LI+ +     +  S+  F  + +LG +  V +++                ALF 
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            ++  G ++ A   F++M+  G+ P   T+N ++ G  L  ++  A      M  +G+ +
Sbjct: 201 YMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           DVVTY T++NG  +      A  L ++M+E +I+P V+ Y+ +I          DA  +F
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM    + PN  TY  ++ G C  G+  + Q++LR+M+ER I P D   F  L+    K
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP-DVLTFNALISASVK 378

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII----- 369
            G L  A  +   M+   I  +   Y  +I  FCK   +D A  + D +   +++     
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438

Query: 370 ----------------LRPQST--LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
                           LR  S   L    ++YN +I   C       A+  F++++  GV
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498

Query: 412 ------------------------------------LDPVAFNNLIRGHSKEGNPDSAFE 435
                                               LD VA+N +I G  K    D A++
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   +   GV  D   Y  +I  +  K   +DA      M ++GH P +S + +++    
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG---RIDLMMQSGSVP 552
           + G +  +  ++  M   G   +     K+ E ++ R   EE +    R  +  ++ S+P
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDA-FTIKMAEEIICRVSDEEIIENYLRPKINGETSSIP 677

Query: 553 NF 554
            +
Sbjct: 678 RY 679



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/449 (20%), Positives = 186/449 (41%), Gaps = 38/449 (8%)

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G + FK +D+A   F  M       T +    +I  +V + R D A+ ++ +M+   + 
Sbjct: 79  SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N  ++  L+   CD  K+        ++ +    P D   F  LL   C    ++ A  
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQP-DVVTFNTLLHGLCLEDRISEALA 197

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +   M+      E G              +  A+ L D++V  EI L P         ++
Sbjct: 198 LFGYMV------ETG--------------FLEAVALFDQMV--EIGLTPV------VITF 229

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I  LC  G+  +A     +++ KG+ +D V +  ++ G  K G+  SA  ++  M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
             +  D   Y  +I+   + G  +DA+     M+E G +P    +  +++     GR   
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A R+++ M+E+ +  ++     ++ A +  G + EA    D M+     P+   ++S++ 
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
              +  +   A  + D         D+ ++  ++D    A +      +L +I  +G V 
Sbjct: 410 GFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 620 DWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           +  + + LI G  +  N   A D+   MI
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 254/581 (43%), Gaps = 48/581 (8%)

Query: 83  PKKGVQWD----EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           P  G+Q D      +  VL+E  G K  + ESV  +  M   G++  V +++ L K + R
Sbjct: 138 PLFGIQADTVVYNHLLNVLVE--GSKMKLLESV--YSEMGARGIKPDVVTFNTLMKALCR 193

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             +   A     +M S G+ P   T+  ++ GF     +E A+R    M   G S   VT
Sbjct: 194 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
            N +INGY +  ++++A     +      EP  I+Y T + G    +    AL++ D M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
                P+  TY  ++  LC  G++ E + +L +MV+R   P D + F  L+   C    L
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRL 372

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL---------VEKEII 369
             A D+ + +    +  +   + ILI   CK      A++L +++         V    +
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 370 LRPQSTL-----------DMEAS-------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
           +    +L           DME++       +YN +I  LC   +  +AE  F Q+  +G+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             + + FN LI G  K+   D AFE++  M   G+  +   Y  ++  Y ++G+   A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L++M  +G       + +++  L + GR Q A +V++ M  KG++        +L++L 
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL---GRDCII 584
            R ++ +AL     M + G  P+   +  +   L   G  I   +  DF L    +  I 
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK--EAFDFMLEMVDKGFIP 670

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           + +S+  + + LL  G        +  IMEK    D + SD
Sbjct: 671 EFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK---VDLRESD 708



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 228/507 (44%), Gaps = 15/507 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +++ L R  ++  A  +L +M  +GV  DE  F  L++ + ++G ++ ++++ 
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M ++G   +  + + L     + GR   A  Y  + +++G EP + TYN  + G   +
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A++  + M   G   DV TYN ++N   +  +++EA+ +  +M ++   P + ++
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I       R ++AL +  ++    V P+  T+  L+  LC  G      ++  EM  
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P D   +  L+   C  G L  A D+LK M     P     Y  +I+  CK    +
Sbjct: 420 SGCTP-DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A ++ D++  + I           A ++N +I  LC + +   A     Q++ +G L P
Sbjct: 479 EAEEVFDQMDLQGI--------SRNAITFNTLIDGLCKDKKIDDAFELINQMISEG-LQP 529

Query: 415 --VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             + +N+++  + K+G+   A +I++ M   G   D   Y  LI    + G    A   L
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M   G  P    +  V++SLF    ++ A  + + M E G   +  L  KI+   L R
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA-LTYKIVFRGLCR 648

Query: 533 --GHVEEALGRIDLMMQSGSVPNFDSL 557
             G ++EA   +  M+  G +P F S 
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPEFSSF 675



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 199/429 (46%), Gaps = 12/429 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL + +  E A  F  D+ T+   +  L +   + HA  ++  M ++G   D   + +
Sbjct: 268 EDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++    K G ++E+  I + M   G    + +++ L   +    R   A     ++  +G
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P  +T+N+++           A+R FE+MK+ G + D VTYNT+I+      K+ +A 
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L  +M+      + I+Y T+I G     R ++A  +FD+M    +  NA+T+  L+ GL
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   K+ +  +++ +M+   + P +N  +  +L   CK G +  AAD+L+ M       +
Sbjct: 507 CKDKKIDDAFELINQMISEGLQP-NNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              YG LI   CKA     A+K+L  +  K   +RP         +YNP++Q L      
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKG--MRPTP------KAYNPVLQSLFRRNNI 617

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP-DSAFEIVKIMGRRGVPRDADAYIC 454
             A   FR++ + G   D + +  + RG  + G P   AF+ +  M  +G   +  ++  
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677

Query: 455 LIESYLRKG 463
           L E  L  G
Sbjct: 678 LAEGLLNLG 686



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 3/306 (0%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A     Q  ++ + P  +  N++ N L    +   AL+ F  ++ +G    D  T+  
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC-TPDEVTYNT 431

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L  +GKL  A  +L DM   G       +  +I+   KK  ++E+ ++FD M   G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           + R+  +++ L   + +  +   A    N+M+SEG++P   TYN +L  +     ++ A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              E M + G  +DVVTY T+ING  +  +   A K+   M+ K + PT  +Y  +++  
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVERYIPPK 300
                  DAL +F EM      P+A+TY  +  GLC  G  + E    + EMV++   P+
Sbjct: 612 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671

Query: 301 DNSVFM 306
            +S  M
Sbjct: 672 FSSFRM 677


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 200/397 (50%), Gaps = 14/397 (3%)

Query: 55   DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
            D  T+  +I+ L + G    A  +  +M   G+  D  ++  L++   + G ++E+++ F
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143

Query: 115  DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
              M+  G+   V +Y++L   + R G +     + N M+  G  P   T+ +++ G    
Sbjct: 1144 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 1203

Query: 175  LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             K+  A +  E M+ +G   D++TYNT++NG     ++++A KLF  + ++ I+  V SY
Sbjct: 1204 GKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 1263

Query: 235  TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-- 292
              +I GY   ++ D+A R F+EM+   +KP+ VTY  L+  LC +G++   QK+  EM  
Sbjct: 1264 NILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 1323

Query: 293  VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
              +++     S +  LL   CK+GHL  A D+ +++ +         + IL++  C+A  
Sbjct: 1324 CGQFL---KLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380

Query: 353  YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
             + A K  D++         ++ L+ +  +YN +I  LC+ G   +A     Q+ +KG L
Sbjct: 1381 LEEAWKQFDEI--------SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 1432

Query: 413  -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
             D + FN +I+   KE     A ++++ M  R    D
Sbjct: 1433 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 178/379 (46%), Gaps = 10/379 (2%)

Query: 21   FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
            F + ++ + L     +  AL  F  +  AG+   D   +  +++ L R G+L  A     
Sbjct: 1086 FTYGMIIDALCKDGMTTEALDMFSEMIGAGILP-DVVVYSSLMDGLCRFGRLKEALEFFK 1144

Query: 81   DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            +M  +G+  D   +  LI    + G+ +E     ++M   G      ++  L   + + G
Sbjct: 1145 EMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 1204

Query: 141  RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
            +   A++    M  +G EP   TYN ++ G  L  +LE A + FE +  RGI L+V +YN
Sbjct: 1205 KVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 1264

Query: 201  TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
             +INGY + +K+DEA + F EM+ K ++P+ ++Y T+I       R   A ++F EM++ 
Sbjct: 1265 ILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 1324

Query: 261  DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
                   TY  LL GLC  G + E   + + + +    P +  VF  LL   C++G L  
Sbjct: 1325 GQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKP-NIEVFSILLDGMCRAGKLEE 1383

Query: 321  AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
            A      + +  +  +   Y ILI   C   M   A+KLL ++ EK  +  P S      
Sbjct: 1384 AWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL--PDSI----- 1436

Query: 381  SSYNPMIQHLCHNGQTGKA 399
             ++N +IQ+L    +  +A
Sbjct: 1437 -TFNVIIQNLLKENEIHEA 1454



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 125/522 (23%), Positives = 231/522 (44%), Gaps = 14/522 (2%)

Query: 92   DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
            D F  L+ S  K G       ++  +  +G++  + + + L                F  
Sbjct: 947  DTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGG 1006

Query: 152  MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
             L  G EP   T   ++ G ++   +  A++ F++M  +G+  D  TY  +ING  + +K
Sbjct: 1007 FLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARK 1066

Query: 212  MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
               A KL  +MK  N +  V +Y  +I          +AL +F EM    + P+ V Y++
Sbjct: 1067 TGLAIKLHEKMK-GNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSS 1125

Query: 272  LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
            L+ GLC  G++ E  +  +EM  R I   D   +  L+    ++G        L  M+  
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRGIS-ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 1184

Query: 332  SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
                +A  + ILI+  CK      A ++L+ +  K          + +  +YN ++  LC
Sbjct: 1185 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHK--------GKEPDILTYNTLMNGLC 1236

Query: 392  HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
              GQ   A   F  L  +G+ L+  ++N LI G+ K+   D AF   + M  +G+     
Sbjct: 1237 LVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTV 1296

Query: 451  AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
             Y  LI +  + G    A+     M   G     S +  +++ L ++G ++ A  + +S+
Sbjct: 1297 TYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSI 1356

Query: 511  VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
             +   K N+++ + +L+ +   G +EEA  + D + ++G  P+   ++ L++ L  KG  
Sbjct: 1357 KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 1416

Query: 568  IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
              AVKLL     + C+ D  ++  ++  LL   +   A  +L
Sbjct: 1417 SEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLL 1458



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 130/555 (23%), Positives = 241/555 (43%), Gaps = 20/555 (3%)

Query: 94   FEVLIESYGKKGIVQ--ESVKIFDIMKQLGVER--SVKSYDALFKLILRRGRYMMAKRYF 149
            FE  +    + GI++  +++K+FD  + L  E      +++ L   + + G Y      +
Sbjct: 912  FERYVRDQCRFGIIKLNDAIKLFD--RSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMY 969

Query: 150  NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
             K+   GI+P  +T N+++        +      F     RG   D VT  T++ G    
Sbjct: 970  RKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWME 1029

Query: 210  KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
              + +A +LF EM +K +     +Y  +I G     +   A+++ ++MK  + K +  TY
Sbjct: 1030 NGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTY 1088

Query: 270  TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
              ++  LC  G   E   +  EM+   I P D  V+  L+   C+ G L  A +  K M 
Sbjct: 1089 GMIIDALCKDGMTTEALDMFSEMIGAGILP-DVVVYSSLMDGLCRFGRLKEALEFFKEME 1147

Query: 330  RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
               I  +   Y  LI    +A ++      L+ +V++            +A ++  +I  
Sbjct: 1148 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR--------GFSPDAFTFTILIDG 1199

Query: 390  LCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
            LC  G+ G+A+     +  KG   D + +N L+ G    G  + A ++ + +  RG+  +
Sbjct: 1200 LCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 1259

Query: 449  ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              +Y  LI  Y +  +  +A    + M   G  P++  + +++ +L + GRV+TA ++  
Sbjct: 1260 VFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 1319

Query: 509  SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
             M   G    L     +L+ L   GH+EEA+     + ++   PN   F  LL  +   G
Sbjct: 1320 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAG 1379

Query: 566  KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
            K   A K  D         D  +Y  +++ L   G    A  +L+++ EKG + D  + +
Sbjct: 1380 KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFN 1439

Query: 626  KLIAGLNQEGNTKQA 640
             +I  L +E    +A
Sbjct: 1440 VIIQNLLKENEIHEA 1454



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 164/327 (50%), Gaps = 2/327 (0%)

Query: 37   EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
            + AL+FF+ +E  G+ + D  T+  +I  L R G        L  M  +G   D   F +
Sbjct: 1137 KEALEFFKEMEGRGI-SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI 1195

Query: 97   LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
            LI+   K+G V E+ +I ++M+  G E  + +Y+ L   +   G+   A + F  +   G
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 157  IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
            I+    +YN+++ G+    K++ A RFFE+M+ +G+    VTYNT+I    +  ++  A+
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 217  KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            KLF EM+       + +Y  ++ G       ++A+ +F  +K  + KPN   ++ LL G+
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375

Query: 277  CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
            C AGK+ E  K   E+ +  + P D   +  L+   C  G L+ A  +L  M       +
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEP-DTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPD 1434

Query: 337  AGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  + ++I+N  K      AI+LL+++
Sbjct: 1435 SITFNVIIQNLLKENEIHEAIQLLEEM 1461



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/471 (23%), Positives = 211/471 (44%), Gaps = 11/471 (2%)

Query: 84   KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            K+G + D      L++    +  + ++V++FD M + G+    K+Y  L   + +  +  
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTG 1068

Query: 144  MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            +A +   KM     +    TY +++           A+  F +M   GI  DVV Y++++
Sbjct: 1069 LAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127

Query: 204  NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            +G  RF ++ EA + F EM+ + I   V +Y ++I G        +     + M      
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187

Query: 264  PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            P+A T+T L+ GLC  GK+ E Q++L  M  +   P D   +  L+   C  G L  A  
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEP-DILTYNTLMNGLCLVGQLEDATK 1246

Query: 324  VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
            + +++    I      Y ILI  +CK +  D A +  +++  K   L+P +       +Y
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKG--LKPSTV------TY 1298

Query: 384  NPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
            N +I  LC +G+   A+  F ++   G  L    +  L+ G  K G+ + A ++ + + +
Sbjct: 1299 NTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKK 1358

Query: 443  RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
                 + + +  L++   R G+  +A    D + ++G  P +  +  ++  L   G +  
Sbjct: 1359 TEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE 1418

Query: 503  ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            A +++  M EKG   +      I++ LL    + EA+  ++ M      P+
Sbjct: 1419 AVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/595 (23%), Positives = 257/595 (43%), Gaps = 33/595 (5%)

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            T+  ++  L + G +  A  +L  M + G+  D   F  +++   K+  + ++  +F   
Sbjct: 475  TYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA 534

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
             + G   +V +Y  L   + +  +   A +   KM+  G      TY+ ++ G     ++
Sbjct: 535  LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 594

Query: 178  ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            E A+     M+  G   D VTYNT+I+G+ + +++ EA  L  EM E    P+V++YTT+
Sbjct: 595  EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 654

Query: 238  IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
              G     R D+A+ I D M +    PNA+TY++++ GLC AG++ E      +M    +
Sbjct: 655  CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 714

Query: 298  PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
                   +  L+   CK+G ++ A + L+ MIR     +   + ILI   C A   D  +
Sbjct: 715  VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 774

Query: 358  KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            +L   + E+            +  +YN MI   C  G+   A     ++   G+  + V 
Sbjct: 775  ELFCGMAER--------GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVT 826

Query: 417  FNNLIRGHSKEGNPDSAFEIVKIMGRRGVP---RDADAYICLIESYLRKGEPADAKTALD 473
               +I+        D A           +P   RD  +Y  LI S +       A   L 
Sbjct: 827  HGIVIKALCGNDRIDEAVSYF-----HSIPEDCRDEISYNTLITSLVASRRSEQALELLR 881

Query: 474  SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            +M+ DG SP +  + +VM+ LF+ G  + A+++++ M  +G   +L     ++  L    
Sbjct: 882  AMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAK 941

Query: 534  HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID--LAS 588
             +  A    + M++    P+   + SL+    +  K   A KLL     R   I+  +  
Sbjct: 942  QLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL-----RSSGIEPTITM 996

Query: 589  YEKVLDALLAAGKTLNAYSILFKIMEKG---GVTDWKSSDKLIAGLNQEGNTKQA 640
            Y  ++D+L     T  A  ++ ++  K    G+  W S   L      EG   +A
Sbjct: 997  YSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTS---LATAYVAEGRVDEA 1048



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 232/526 (44%), Gaps = 44/526 (8%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           ++ +Y+ L   + + G    A      M+  G+ P   T+N +L G     ++  A   F
Sbjct: 472 TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           +    RG   +VVTY+T+I+G ++  KMDEA +L A+M E       ++Y+T++ G + V
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            R +DA+ +  +M+     P+AVTY  L+ G     ++ E   +LREM+E    P   + 
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT- 650

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L    C+SG  + A ++L  M        A  Y  +++  CKA     A+   +K+ 
Sbjct: 651 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 710

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRG 423
             E++  P         +Y+ +I  LC  G+  +A  F  ++++ G + D V F+ LI G
Sbjct: 711 RDEVV-APHVI------AYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILING 763

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
               G  D+  E+   M  RG   D  AY  +I +Y  KGE + A   L+ M   G +  
Sbjct: 764 LCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKN 823

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
           +     V+++L  + R+  A     S+ E   ++ +     ++ +L+     E+AL  + 
Sbjct: 824 TVTHGIVIKALCGNDRIDEAVSYFHSIPED-CRDEISY-NTLITSLVASRRSEQALELLR 881

Query: 544 LMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
            M+  G  P                                D  +Y  V+D L  AG   
Sbjct: 882 AMVADGGSP--------------------------------DACNYMTVMDGLFKAGSPE 909

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
            A  +L ++  +G   D ++   +I+GL++      A D    M+R
Sbjct: 910 VAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLR 955



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 148/645 (22%), Positives = 278/645 (43%), Gaps = 43/645 (6%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ N L  A     A   FR   + G F     T+  +I+ L R  +++    +L +M
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFRKAIQFG-FRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G   +   +  L+ +   +G  +E+  + + M   G    + ++  + K + + G  
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R  ++M+  G  P    + V+L       +++ A  FF+ +   G + D VTYNTM
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++G  +  +++ A  +   + E    PTV ++T  + G         A   FD M    V
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN VTY AL+ GLC AGK+     +LR+   +         F  LL   C++  L  A 
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQ----AGMFAFSSLLHGLCQAHRLEEAI 298

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +LKAM    +P     +  L+   C+A   D A +L D + E        S    +  +
Sbjct: 299 QLLKAMP--CVPNVV-CFNSLMNGLCQARRVDEAFELFDVMKE--------SGCSADVIT 347

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIV-KI 439
           YN +++ LC   +  +A      + +     P  V F+ LI+G    G  + A+E+  ++
Sbjct: 348 YNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERM 407

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG---------HSPASSL---- 486
           +   G+  +   Y  L+E   + G+    +   + M+E           HSP        
Sbjct: 408 VAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQ 467

Query: 487 --------FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
                   + +++  L + G V+ A  +++ M+E G+  ++     +L+ L     + +A
Sbjct: 468 VCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDA 527

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
                  ++ G  PN   + +L+  LS+  K   A++LL   +   C  +  +Y  V+D 
Sbjct: 528 HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 587

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           LL  G+  +A  +L ++ + G + D  + + LI G  +    ++A
Sbjct: 588 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 632



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 146/585 (24%), Positives = 251/585 (42%), Gaps = 82/585 (14%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L   + + GR   A   F K +  G  PT  TY+ ++ G     +++   +  E+M
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
             RG + + VTYNT++N      +  EA  L   M      P +I++  +IKG       
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 248 DDALRIFDEM--KSF--DVK-------------------------------PNAVTYTAL 272
           + A R+ DEM  + F  DV+                               P+AVTY  +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GL  AG++     VL+ + E +  P   +  + + G+  K+G+L  A +   +M +  
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLS-KAGNLTGAYEFFDSMPQTG 241

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLL-DKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
           +      Y  LI+  CKA   D A+ LL DK           S   M A  ++ ++  LC
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDK----------NSQAGMFA--FSSLLHGLC 289

Query: 392 HNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              +  +A     QL+K     P  V FN+L+ G  +    D AFE+  +M   G   D 
Sbjct: 290 QAHRLEEA----IQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADV 345

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIE-DGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
             Y  L++   +     +A   ++ M   +G SP    F ++++ L   GRV  A  V +
Sbjct: 346 ITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYE 405

Query: 509 SMVE-KGVKENLDLVAKILEALLMRGH-------VEEALGR--------------IDLMM 546
            MV  +G+  N    A +LE L   G         E+ L R              +D +M
Sbjct: 406 RMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLM 465

Query: 547 QSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
                P    +++L++ LS+ G    A+ LL+F +      D+ ++  VLD L    + L
Sbjct: 466 VQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRIL 525

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           +A+++  + +E+G   +  +   LI GL++     +A  +L++M+
Sbjct: 526 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 570



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 204/452 (45%), Gaps = 25/452 (5%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           +VTYN +ING  +  ++ +A   F +  +    PTV++Y+T+I G       D   ++ +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM      PNAVTY  L+  L   G+  E   +L  M     PP+  +  + + G+ CK 
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGL-CKE 119

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G + AA  V+  M+      +   + +L+   C+    D A     +++   I   P   
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVL--LIGFTP--- 174

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIR--GHSKEGNPDSA 433
              +A +YN M+  L   G+   A +   QL+ +    P  F   I   G SK GN   A
Sbjct: 175 ---DAVTYNTMVDGLYKAGRLEAAGMVL-QLLAESFSSPTVFTFTIAVDGLSKAGNLTGA 230

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL-FRSVME 492
           +E    M + GV  +   Y  LI+   + G+      AL  ++ D +S A    F S++ 
Sbjct: 231 YEFFDSMPQTGVSPNTVTYDALIDGLCKAGK---LDIAL-GLLRDKNSQAGMFAFSSLLH 286

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS-- 550
            L +  R++ A +++K+M       N+     ++  L     V+EA    D+M +SG   
Sbjct: 287 GLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSA 343

Query: 551 -VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRD-CIIDLASYEKVLDALLAAGKTLNAYSI 608
            V  ++ LL  L +  +   A + ++     + C  ++ ++  ++  L  AG+   A+ +
Sbjct: 344 DVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEV 403

Query: 609 LFKIMEKGGVTDWKSSDK-LIAGLNQEGNTKQ 639
             +++   G++  + +   L+ GL + G++++
Sbjct: 404 YERMVAVEGISPNRFTYAFLLEGLCKAGDSRR 435



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 98/203 (48%), Gaps = 3/203 (1%)

Query: 90   DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
            DE  +  LI S       ++++++   M   G      +Y  +   + + G   +A +  
Sbjct: 856  DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL 915

Query: 150  NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
             +M S G  P   TY +M+ G   + +L  A  +FE+M  + +  D + Y+++I+ + + 
Sbjct: 916  QEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKA 975

Query: 210  KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
             K+D+A KL   ++   IEPT+  Y+TM+         D AL +  EMKS + +P    +
Sbjct: 976  DKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIW 1032

Query: 270  TALLPGLCDAGKMVEVQKVLREM 292
            T+L       G++ E  K++ ++
Sbjct: 1033 TSLATAYVAEGRVDEAVKLVNDL 1055



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 112/236 (47%), Gaps = 6/236 (2%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            H +V   L G    + A+ +F  +        D  ++  +I  L    +   A  +L  M
Sbjct: 827  HGIVIKALCGNDRIDEAVSYFHSIPED---CRDEISYNTLITSLVASRRSEQALELLRAM 883

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G   D   +  +++   K G  + + K+   M+  G    +++Y  +   + +  + 
Sbjct: 884  VADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQL 943

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             +A  YF +ML + ++P    Y+ ++  F  + K++ A +    ++S GI   +  Y+TM
Sbjct: 944  PLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTM 1000

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
            ++   + +  D+A ++  EMK KN EP +  +T++   YVA  R D+A+++ ++++
Sbjct: 1001 VDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 244/564 (43%), Gaps = 38/564 (6%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L  + DH LV  VL         +QFF+W  +   F HD  T++ +I  
Sbjct: 74  WGPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHC 133

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L   G L      + +M +            +++  GK  +V +++ IF  +K    + +
Sbjct: 134 LDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPT 193

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFF 184
             +Y+++  ++++ G +      +N+M +EG   P   TY+ ++  F    + ++AI  F
Sbjct: 194 SNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLF 253

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           ++MK  G+      Y T++  Y +  ++++A  L  EMKEK    TV +YT +IKG    
Sbjct: 254 DEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKA 313

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK---D 301
            + ++A  IF  M     KP+ V    L+  L  AG++ +  K+  EM      P     
Sbjct: 314 GKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTY 373

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           N+V   L   + ++     A    + M    +   +  Y ILI+ FCK    ++A+ LL+
Sbjct: 374 NTVIKALFESKARASE---AFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLE 430

Query: 362 KLVEKEIILRPQSTLDM---------------------------EASSYNPMIQHLCHNG 394
           ++ EK     P +   +                            A  Y  MI+HL   G
Sbjct: 431 EMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCG 490

Query: 395 QTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +A   F ++ K G   D  A+N L+ G  + G  D A  +++ M   G   D +++ 
Sbjct: 491 RLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHN 550

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            ++  + R G P  A      M      P    + +V+  L   G  + A+++MK M  K
Sbjct: 551 IILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSK 610

Query: 514 GVKENLDLVAKILEALLMRGHVEE 537
           G + +L   + ILEA+   G ++E
Sbjct: 611 GFEYDLITYSSILEAV---GKIDE 631



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 103/481 (21%), Positives = 200/481 (41%), Gaps = 15/481 (3%)

Query: 173 LSLKLETAIRFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           + +++   I+FF+   K R    D  TY  +I+  +    + E  K   EM         
Sbjct: 100 IDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGP 159

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
              + ++K     +  + AL IF ++K    KP + TY +++  L   G   +V ++  E
Sbjct: 160 ADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNE 219

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M        D   +  L+    K G  ++A  +   M    +   A  Y  ++  + K  
Sbjct: 220 MCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLG 279

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             ++A+ L+ ++ EK   L           +Y  +I+ +   G+  +A   F  ++K+G 
Sbjct: 280 RVEKALGLVQEMKEKGCALT--------VYTYTELIKGVGKAGKVEEAYSIFMNMLKEGC 331

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES-YLRKGEPADAK 469
             D V  NNLI    K G    A ++ + M       +   Y  +I++ +  K   ++A 
Sbjct: 332 KPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAF 391

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              + M E+G  P+S  +  +++   +  RV+ A  +++ M EKG          ++ AL
Sbjct: 392 LWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINAL 451

Query: 530 LMRGHVEEALGRIDLMMQS---GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
                 E A      + ++    S   +  ++  L + G+   AV L +      C  D+
Sbjct: 452 GKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDV 511

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSR 645
            +Y  ++  ++  G T  A+S+L  + E G   D  S + ++ G  + G  K A ++ +R
Sbjct: 512 YAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTR 571

Query: 646 M 646
           M
Sbjct: 572 M 572


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 146/619 (23%), Positives = 260/619 (42%), Gaps = 43/619 (6%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK-GVQWDEDMFEVL 97
           AL+ F   +    F H   T+  +++ LG  G+      +L +M +       E  +   
Sbjct: 23  ALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEA 82

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           +++YG+KG VQE+V  F+ M     + SV S++A+  +++  G +  A + + +M   G+
Sbjct: 83  MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGV 142

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
           +   +TY + +  F  + +   A+R   +M   G   + V Y T++ G     + D A +
Sbjct: 143 QSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARE 202

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           LF EM  + + P V+++  ++          ++ R+  ++    V PN  T+   + GLC
Sbjct: 203 LFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLC 262

Query: 278 DAG---------KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
             G         ++VE ++ LR+MV     P D+  +  ++   CK G +  A  VLK  
Sbjct: 263 REGALDRAVRNSRVVEAEEYLRKMVNGGFEP-DDLTYNSIIDGYCKKGMVQDANRVLKDA 321

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAI-------------------KLLDKLVEKEII 369
           +      +   Y  LI  FCK    DRA+                    L+  L ++ +I
Sbjct: 322 VFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLI 381

Query: 370 LRPQSTLDMEAS--------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           L     ++  A         +YN +I  LC  G    A       + KG   D   +N L
Sbjct: 382 LPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTL 441

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G+ K+   DSA E+V  M  +G+  D   Y  L+    + G+  +      +M E G 
Sbjct: 442 IDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGC 501

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           +P    +  +++SL +  +V  A  ++  M  KG+K ++     +       G ++ A  
Sbjct: 502 TPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQ 561

Query: 541 RIDLMMQSGSV----PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
               M +   V      ++ ++S  SE+     A+KL        C  D  +Y  V+D  
Sbjct: 562 LFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGF 621

Query: 597 LAAGKTLNAYSILFKIMEK 615
              G     Y  L + MEK
Sbjct: 622 CKMGNITQGYKFLLENMEK 640



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/569 (23%), Positives = 259/569 (45%), Gaps = 23/569 (4%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+  R +   G  + +   +  ++  L   G+ +HAR +  +M  + +  D   F  L+
Sbjct: 165 ALRLLRNMPELGC-DSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLV 223

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG---------RYMMAKRYF 149
               KKG+V ES ++   + + GV  ++ +++   + + R G         R + A+ Y 
Sbjct: 224 HVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYL 283

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
            KM++ G EP   TYN ++ G+     ++ A R  +D   +G   D  TY ++ING+ + 
Sbjct: 284 RKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKD 343

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
              D A  +F +   K + P+++ Y T+IKG         AL++ +EM      PN  TY
Sbjct: 344 GDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTY 403

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
             ++ GLC  G + +   ++ + + +  PP D   +  L+   CK   L++A +++  M 
Sbjct: 404 NLVINGLCKMGCVSDASHLVDDAIAKGCPP-DIFTYNTLIDGYCKQLKLDSATEMVNRMW 462

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
              +  +   Y  L+   CKA   +  +++   + EK     P         +YN ++  
Sbjct: 463 SQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCT--PNII------TYNIIVDS 514

Query: 390 LCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR-GVPR 447
           LC   +  +A     ++  KG+  D V+F  L  G  K G+ D A+++ + M ++  V  
Sbjct: 515 LCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCH 574

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
               Y  ++ ++  +     A      M   G  P +  +R V++   + G +    + +
Sbjct: 575 TTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFL 634

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKT 567
              +EK    +L    ++L  L ++  V EA+G I LM+Q G VP  +++ ++     K 
Sbjct: 635 LENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP--ETVNTIFEADKKV 692

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
           +AA K+L   L +   I   +YE + D +
Sbjct: 693 VAAPKILVEDLLKKGHIAYYTYELLYDGI 721



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 134/551 (24%), Positives = 245/551 (44%), Gaps = 25/551 (4%)

Query: 115 DIMKQLGVERSVKSYDAL------FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           D +K L +  S KS D        +K I+++  +        K+LSE  E   +  N +L
Sbjct: 19  DPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRE---NVNNALL 75

Query: 169 WGFFLSL--------KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
            G ++          K++ A+  FE M        V ++N ++N    F   ++A K++ 
Sbjct: 76  EGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYM 135

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
            M+++ ++  V +YT  IK +    R   ALR+   M       NAV Y  ++ GL D+G
Sbjct: 136 RMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSG 195

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           +    +++  EM+ R + P D   F KL+ V CK G +  +  +L  +++  +      +
Sbjct: 196 EHDHARELFDEMLARCLCP-DVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTF 254

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS--SYNPMIQHLCHNGQTGK 398
            I ++  C+    DRA++   ++VE E  LR       E    +YN +I   C  G    
Sbjct: 255 NIFVQGLCREGALDRAVRN-SRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQD 313

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A    +  + KG   D   + +LI G  K+G+PD A  + K    +G+      Y  LI+
Sbjct: 314 ANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIK 373

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
              ++G    A   ++ M E+G  P    +  V+  L + G V  AS ++   + KG   
Sbjct: 374 GLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPP 433

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           ++     +++    +  ++ A   ++ M   G  P+   +++LL+ L + GK+   +++ 
Sbjct: 434 DIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIF 493

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                + C  ++ +Y  ++D+L  A K   A  +L ++  KG   D  S   L  G  + 
Sbjct: 494 KAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKI 553

Query: 635 GNTKQADILSR 645
           G+   A  L R
Sbjct: 554 GDIDGAYQLFR 564


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 200/397 (50%), Gaps = 14/397 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L + G    A  +  +M   G+  D  ++  L++   + G ++E+++ F
Sbjct: 145 DVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 204

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  G+   V +Y++L   + R G +     + N M+  G  P   T+ +++ G    
Sbjct: 205 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 264

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K+  A +  E M  +G   D++TYNT++NG     ++++A KLF  + ++ I+  V SY
Sbjct: 265 GKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 324

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-- 292
             +I GY   ++ D+A R+F+EM+   +KP+ VTY  L+  LC +G++   QK+  EM  
Sbjct: 325 NILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 384

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
             +++     S +  LL   CK+GHL  A D+ +++ +         + IL++  C+A  
Sbjct: 385 CGQFLKL---STYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            + A K  D++         ++ L+ +  +YN +I  LC+ G   +A     Q+ +KG L
Sbjct: 442 LEEAWKQFDEI--------SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 493

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
            D + FN +I+   KE     A ++++ M  R    D
Sbjct: 494 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 176/370 (47%), Gaps = 10/370 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F + ++ + L     +  AL  F  +  AG+   D   +  +++ L R G+L  A     
Sbjct: 147 FTYGMIIDSLCKDGMTTEALDMFSEMIGAGIL-PDVVVYSSLMDGLCRFGRLKEALEFFK 205

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  +G+  D   +  LI    + G+ +E     ++M   G      ++  L   + + G
Sbjct: 206 EMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 265

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A++    M  +G EP   TYN ++ G  L  +LE A + FE +  RGI L+V +YN
Sbjct: 266 KVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 325

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +INGY + +K+DEA +LF EM+ K ++P+ ++Y T+I       R   A ++F EM++ 
Sbjct: 326 ILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 385

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
                  TY  LL GLC  G + E   + + + +    P +  VF  LL   C++G L  
Sbjct: 386 GQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKP-NIEVFSILLDGMCRAGKLEE 444

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A      + +  +  +   Y ILI   C   M   A+KLL ++ EK  +  P S      
Sbjct: 445 AWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL--PDSI----- 497

Query: 381 SSYNPMIQHL 390
            ++N +IQ+L
Sbjct: 498 -TFNVIIQNL 506



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 212/461 (45%), Gaps = 14/461 (3%)

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L  G EP   T   ++ G ++   +  A++ F++M  +G+  D  TY  +ING  + +K 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
             A KL  +MK  N +  V +Y  +I          +AL +F EM    + P+ V Y++L
Sbjct: 129 GLAIKLHEKMK-GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GLC  G++ E  +  +EM  R I   D   +  L+    ++G        L  M+   
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISA-DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              +A  + ILI+  CK      A ++L+        L      + +  +YN ++  LC 
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILE--------LMHHKGKEPDILTYNTLMNGLCL 298

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            GQ   A   F  L  +G+ L+  ++N LI G+ K+   D AF + + M  +G+      
Sbjct: 299 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVT 358

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI +  + G    A+     M   G     S +  +++ L ++G ++ A  + +S+ 
Sbjct: 359 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           +   K N+++ + +L+ +   G +EEA  + D + ++G  P+   ++ L++ L  KG   
Sbjct: 419 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 478

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
            AVKLL     + C+ D  ++  ++  LL   +   A  +L
Sbjct: 479 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLL 519



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 212/471 (45%), Gaps = 11/471 (2%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K+G + D      L++    +  + ++V++FD M + G+    K+Y  L   + +  +  
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           +A +   KM     +    TY +++           A+  F +M   GI  DVV Y++++
Sbjct: 130 LAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G  RF ++ EA + F EM+ + I   V +Y ++I G        +     + M      
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+A T+T L+ GLC  GK+ E Q++L  M  +   P D   +  L+   C  G L  A  
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEP-DILTYNTLMNGLCLVGQLEDATK 307

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + +++    I      Y ILI  +CK +  D A +L +++  K   L+P +       +Y
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKG--LKPSTV------TY 359

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I  LC +G+   A+  F ++   G  L    +  L+ G  K G+ + A ++ + + +
Sbjct: 360 NTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKK 419

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
                + + +  L++   R G+  +A    D + ++G  P +  +  ++  L   G +  
Sbjct: 420 TEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE 479

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           A +++  M EKG   +      I++ LL    + EA+  ++ M      P+
Sbjct: 480 AVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 200/455 (43%), Gaps = 14/455 (3%)

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           RG   D VT  T++ G      + +A +LF EM EK +     +Y  +I G     +   
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A+++ ++MK  + K +  TY  ++  LC  G   E   +  EM+   I P D  V+  L+
Sbjct: 131 AIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILP-DVVVYSSLM 188

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C+ G L  A +  K M    I  +   Y  LI    +A ++      L+ +V++   
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR--- 245

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
                    +A ++  +I  LC  G+ G+A+     +  KG   D + +N L+ G    G
Sbjct: 246 -----GFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVG 300

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             + A ++ + +  RG+  +  +Y  LI  Y +  +  +A    + M   G  P++  + 
Sbjct: 301 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYN 360

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           +++ +L + GRV+TA ++   M   G    L     +L+ L   GH+EEA+     + ++
Sbjct: 361 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKT 420

Query: 549 GSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
              PN   F  LL  +   GK   A K  D         D  +Y  +++ L   G    A
Sbjct: 421 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 480

Query: 606 YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             +L+++ EKG + D  + + +I  L +E    +A
Sbjct: 481 VKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 515


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 130/556 (23%), Positives = 247/556 (44%), Gaps = 51/556 (9%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE--THLKMIEILGRVGKLNHARCILL 80
           +N++   L   K +E AL+    +   G  +H     T+  +I+ L +   ++ A+ +  
Sbjct: 167 YNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQ 226

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M  KGV+ +   +  LI  Y   G  +E V++   M   G++     Y  L   + + G
Sbjct: 227 HMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNG 286

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A+  F+ ++ +GI+P    Y ++L G+     L     F + M   G+S D   +N
Sbjct: 287 RCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFN 346

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            M N Y +   +DEA  +F +M+++ + P V++Y  +I     + R DDA+  F++M + 
Sbjct: 347 IMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINE 406

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ-CKSGHLN 319
            V P+   +++L+ GLC   K  + +K+  E++++ I  + N+ F  +L    C+ G + 
Sbjct: 407 GVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGI--RLNAAFFNILMCNLCREGRVM 464

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  ++  M+R+ +  +   Y  L++  C     D A KLLD +V   I L+P      +
Sbjct: 465 EAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMV--SIGLKP------D 516

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGN-------- 429
             +YN ++   C   +   A   FR+++ KG L P  V +N ++ G  + G         
Sbjct: 517 EFTYNTLLHGYCKARRIDDAYSLFREMLMKG-LTPGVVTYNTILHGLFQIGRFCEAKELY 575

Query: 430 ---------------------------PDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
                                       D AF++ + +  + +  D      +I + L+ 
Sbjct: 576 LNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKG 635

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G   DA     ++   G  P    +R + E+L ++G ++    +  +M E G   N  ++
Sbjct: 636 GRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRML 695

Query: 523 AKILEALLMRGHVEEA 538
             ++  LL RG +  A
Sbjct: 696 NALVRWLLHRGDIGRA 711



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 206/448 (45%), Gaps = 20/448 (4%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L+     L  M + GV  D  +F ++  +Y KK ++ E++ IFD M+Q  +   V +Y
Sbjct: 321 GALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNY 380

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            AL   + + GR   A   FN+M++EG+ P    ++ +++G     K E A + F ++  
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLD 440

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +GI L+   +N ++    R  ++ EA++L   M   ++ P VISY T++ G+    R D+
Sbjct: 441 QGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDE 500

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP---KDNSVFM 306
           A ++ D M S  +KP+  TY  LL G C A ++ +   + REM+ + + P     N++  
Sbjct: 501 AAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILH 560

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L  +    G    A ++   MI      +   Y I++   C+    D A K+   L  K
Sbjct: 561 GLFQI----GRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSK 616

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGH-S 425
           +        L ++  + N MI  L   G+   A   F  +   G++  V    LI  +  
Sbjct: 617 D--------LQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLI 668

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           KEG+ +   E+   M   G   ++     L+   L +G+   A   L  + E   S  +S
Sbjct: 669 KEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEAS 728

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEK 513
              S++ S++     Q   ++ KS+ EK
Sbjct: 729 T-TSMLISIYSRAEYQ---QLAKSLPEK 752



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 134/594 (22%), Positives = 249/594 (41%), Gaps = 20/594 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDED-MFEVLIESYGKKGIVQESVKIF-D 115
           T+  +I    R+G+L H       + K G   +   +F  L++       V E+  I   
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLR 153

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTYNVMLWGFF 172
            M + G   +V SY+ L K +    R   A    + M  +G     P   TY  ++ G  
Sbjct: 154 RMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLC 213

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
            +  ++ A   F+ M  +G+  +  TY  +I+GY    K  E  ++  EM    ++P  +
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCV 273

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
            Y  ++       R  +A  IFD +    +KP+   Y  LL G    G + E+   L  M
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLM 333

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           V   + P D+ +F  +     K   ++ A  +   M +  +     +YG LI+  CK   
Sbjct: 334 VRNGVSP-DHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGR 392

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            D A+   ++++ + +      T D+    ++ ++  LC   +  KAE  F +++ +G+ 
Sbjct: 393 VDDAVLKFNQMINEGV------TPDIFV--FSSLVYGLCTVDKWEKAEKLFFEVLDQGIR 444

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           L+   FN L+    +EG    A  ++ +M R  V  D  +Y  L++ +   G   +A   
Sbjct: 445 LNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKL 504

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           LD M+  G  P    + +++    +  R+  A  + + M+ KG+   +     IL  L  
Sbjct: 505 LDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQ 564

Query: 532 RGHVEEA----LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            G   EA    L  I+   +   +  +  +L+ L        A K+      +D  +D+ 
Sbjct: 565 IGRFCEAKELYLNMIN-NRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIF 623

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           +   ++ ALL  G+  +A  +   I   G V D ++   +   L +EG+ ++ D
Sbjct: 624 TINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELD 677



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 173/401 (43%), Gaps = 28/401 (6%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGL----CDAGKMVEV---QKVLREMVERYIPPK 300
           DDAL++FDEM ++    +  T+  LL  +    C +   + V    +++RE   +  P  
Sbjct: 33  DDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS- 91

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP-TEAGHYGILIENFCKAEMYDRAIKL 359
            +  +  L+G  C+ G L         +++          +G L++  C A+  D A   
Sbjct: 92  -SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEA--- 147

Query: 360 LDKLVEKEIILR--PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG----VLD 413
                  +I+LR  P+    +   SYN +++ LC+  +  +A      +   G      +
Sbjct: 148 ------TDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPN 201

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +  +I G  K    D A  + + M  +GV  +   Y CLI  YL  G+  +    L 
Sbjct: 202 VVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQ 261

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M   G  P   ++  +++ L ++GR   A  +  S++ KG+K ++ +   +L      G
Sbjct: 262 EMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEG 321

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            + E    +DLM+++G  P+   F+ + +  ++K     A+ + D    +     + +Y 
Sbjct: 322 ALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYG 381

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            ++DAL   G+  +A     +++ +G   D      L+ GL
Sbjct: 382 ALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGL 422


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 254/581 (43%), Gaps = 48/581 (8%)

Query: 83  PKKGVQWD----EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           P  G+Q D      +  VL+E  G K  + ESV  +  M   G++  V +++ L K + R
Sbjct: 138 PLFGIQADTVVYNHLLNVLVE--GSKMKLLESV--YSEMGARGIKPDVVTFNTLMKALCR 193

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             +   A     +M S G+ P   T+  ++ GF     +E A+R    M   G S   VT
Sbjct: 194 AHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
            N +INGY +  ++++A     +      EP  I+Y T + G    +    AL++ D M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
                P+  TY  ++  LC  G++ E + +L +MV+R   P D + F  L+   C    L
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRL 372

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL---------VEKEII 369
             A D+ + +    +  +   + ILI   CK      A++L +++         V    +
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 370 LRPQSTL-----------DMEAS-------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
           +    +L           DME++       +YN +I  LC   +  +AE  F Q+  +G+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             + + FN LI G  K+   D AFE++  M   G+  +   Y  ++  Y ++G+   A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L++M  +G       + +++  L + GR Q A +V++ M  KG++        +L++L 
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL---GRDCII 584
            R ++ +AL     M + G  P+   +  +   L   G  I   +  DF L    +  I 
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK--EAFDFMLEMVDKGFIP 670

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           + +S+  + + LL  G        +  IMEK    D + SD
Sbjct: 671 EFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK---VDLRESD 708



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 228/507 (44%), Gaps = 15/507 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +++ L R  ++  A  +L +M  +GV  DE  F  L++ + ++G ++ ++++ 
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M ++G   +  + + L     + GR   A  Y  + +++G EP + TYN  + G   +
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A++  + M   G   DV TYN ++N   +  +++EA+ +  +M ++   P + ++
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I       R ++AL +  ++    V P+  T+  L+  LC  G      ++  EM  
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P D   +  L+   C  G L  A D+LK M     P     Y  +I+  CK    +
Sbjct: 420 SGCTP-DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A ++ D++  + I           A ++N +I  LC + +   A     Q++ +G L P
Sbjct: 479 EAEEVFDQMDLQGI--------SRNAITFNTLIDGLCKDKKIDDAFELINQMISEG-LQP 529

Query: 415 --VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             + +N+++  + K+G+   A +I++ M   G   D   Y  LI    + G    A   L
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M   G  P    +  V++SLF    ++ A  + + M E G   +  L  KI+   L R
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA-LTYKIVFRGLCR 648

Query: 533 --GHVEEALGRIDLMMQSGSVPNFDSL 557
             G ++EA   +  M+  G +P F S 
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPEFSSF 675



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 199/429 (46%), Gaps = 12/429 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL + +  E A  F  D+ T+   +  L +   + HA  ++  M ++G   D   + +
Sbjct: 268 EDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++    K G ++E+  I + M   G    + +++ L   +    R   A     ++  +G
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P  +T+N+++           A+R FE+MK+ G + D VTYNT+I+      K+ +A 
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L  +M+      + I+Y T+I G     R ++A  +FD+M    +  NA+T+  L+ GL
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   K+ +  +++ +M+   + P +N  +  +L   CK G +  AAD+L+ M       +
Sbjct: 507 CKDKKIDDAFELINQMISEGLQP-NNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              YG LI   CKA     A+K+L  +  K   +RP         +YNP++Q L      
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKG--MRPTP------KAYNPVLQSLFRRNNI 617

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP-DSAFEIVKIMGRRGVPRDADAYIC 454
             A   FR++ + G   D + +  + RG  + G P   AF+ +  M  +G   +  ++  
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677

Query: 455 LIESYLRKG 463
           L E  L  G
Sbjct: 678 LAEGLLNLG 686



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 3/306 (0%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A     Q  ++ + P  +  N++ N L    +   AL+ F  ++ +G    D  T+  
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC-TPDEVTYNT 431

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L  +GKL  A  +L DM   G       +  +I+   KK  ++E+ ++FD M   G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           + R+  +++ L   + +  +   A    N+M+SEG++P   TYN +L  +     ++ A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              E M + G  +DVVTY T+ING  +  +   A K+   M+ K + PT  +Y  +++  
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVERYIPPK 300
                  DAL +F EM      P+A+TY  +  GLC  G  + E    + EMV++   P+
Sbjct: 612 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671

Query: 301 DNSVFM 306
            +S  M
Sbjct: 672 FSSFRM 677


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 203/433 (46%), Gaps = 48/433 (11%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           SV S + L   +++   +   +  + +M+   I P   T+N ++ G     KL  A    
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 185 EDMKSRGISLDVVTYNTMINGY---NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +DMK  G   +VVTYNT+I+GY    R  KM +A+ +  EM E  + P  +++  +I G+
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              E    AL++F+EM+S  +KP  VTY +L+ GLC+ GK+ E + +L EM+   + P  
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP-- 371

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
                                +V+              Y  LI  +CK ++ + A +L D
Sbjct: 372 ---------------------NVIT-------------YNALINGYCKKKLLEEARELFD 397

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            +         +  L     ++N ++   C  G+  +A +  + +++KG L +   +N L
Sbjct: 398 NI--------GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCL 449

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  +EG  +    ++  M  RGV  D   Y  LI ++  K EP  A   +D M++ G 
Sbjct: 450 IVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGL 509

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P+   +  ++     +G ++ A  + K M ++G   N+     +++    +G +E+A G
Sbjct: 510 KPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANG 569

Query: 541 RIDLMMQSGSVPN 553
            ++ M++ G +PN
Sbjct: 570 LLNEMLEKGLIPN 582



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 179/337 (53%), Gaps = 10/337 (2%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           +GRVGK+  A  IL +M +  V  +   F VLI+ + K   +  ++K+F+ M+  G++ +
Sbjct: 278 MGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPT 337

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V +Y++L   +   G+   AK   ++MLS  ++P   TYN ++ G+     LE A   F+
Sbjct: 338 VVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFD 397

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           ++  +G++ +V+T+NT+++GY +F KM+EA  L   M EK   P   +Y  +I G+    
Sbjct: 398 NIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREG 457

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           + ++   + +EM+   VK + VTY  L+   C+  +  +  +++ EM+++ + P  +  +
Sbjct: 458 KMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKP-SHLTY 516

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             LL   C  G+L AA ++ K M +         Y +LI+ +C+    + A  LL++++E
Sbjct: 517 NILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLE 576

Query: 366 KEIILRPQSTL------DMEASSYNPMIQ-HLCHNGQ 395
           K +I  P  T       +M    + P I+ HL H  Q
Sbjct: 577 KGLI--PNRTTYEIIKEEMMEKGFLPDIEGHLYHASQ 611



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 195/415 (46%), Gaps = 18/415 (4%)

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           L V++ N +++   +  +    E ++ EM  + I P +I++ T+I G   V + + A  +
Sbjct: 193 LSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDV 252

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCD---AGKMVEVQKVLREMVERYIPPKDNSV-FMKLL 309
            D+MK +   PN VTY  L+ G C     GKM +   +L+EMVE  + P  NSV F  L+
Sbjct: 253 VDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSP--NSVTFNVLI 310

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              CK  +L+AA  V + M    +      Y  L+   C     + A  LLD+++     
Sbjct: 311 DGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEML----- 365

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
               S L     +YN +I   C      +A   F  + K+G+  + + FN L+ G+ K G
Sbjct: 366 ---SSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFG 422

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             + AF + K+M  +G   +A  Y CLI  + R+G+  + K  L+ M   G    +  + 
Sbjct: 423 KMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYN 482

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            ++ +  E    + A+R++  M++KG+K +      +L    M G++  AL     M + 
Sbjct: 483 ILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKE 542

Query: 549 G---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           G   +V  ++ L+     KGK   A  LL+  L +  I +  +YE + + ++  G
Sbjct: 543 GRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 135/266 (50%), Gaps = 1/266 (0%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           +N   AL+ F  ++  GL      T+  ++  L   GKLN A+ +L +M    ++ +   
Sbjct: 317 ENLSAALKVFEEMQSQGL-KPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVIT 375

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI  Y KK +++E+ ++FD + + G+  +V +++ L     + G+   A      ML
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G  P   TYN ++ GF    K+E       +M+ RG+  D VTYN +I+ +   K+  
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPK 495

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A +L  EM +K ++P+ ++Y  ++ GY        AL +  +M+      N VTY  L+
Sbjct: 496 KAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLI 555

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPP 299
            G C  GK+ +   +L EM+E+ + P
Sbjct: 556 QGYCRKGKLEDANGLLNEMLEKGLIP 581



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/350 (22%), Positives = 147/350 (42%), Gaps = 15/350 (4%)

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           LL    K         V K MIR  I      +  +I   CK    ++A  ++D +  K 
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDM--KV 258

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGK---AEIFFRQLMKKGV-LDPVAFNNLIRG 423
               P         +YN +I   C  G+ GK   A+   +++++  V  + V FN LI G
Sbjct: 259 WGFWPN------VVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDG 312

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K+ N  +A ++ + M  +G+      Y  L+     +G+  +AK  LD M+     P 
Sbjct: 313 FCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPN 372

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + +++    +   ++ A  +  ++ ++G+  N+     +L      G +EEA     
Sbjct: 373 VITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQK 432

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           +M++ G +PN   ++ L+     +GK      LL+    R    D  +Y  ++ A     
Sbjct: 433 VMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKK 492

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           +   A  ++ ++++KG      + + L+ G   EGN + A  L + +  E
Sbjct: 493 EPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKE 542



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 128/273 (46%), Gaps = 8/273 (2%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           S NP++  L    + G  E  +++++++ +  + + FN +I G  K G  + A ++V  M
Sbjct: 197 SCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDM 256

Query: 441 GRRGVPRDADAYICLIESYL---RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
              G   +   Y  LI+ Y    R G+   A   L  M+E+  SP S  F  +++   +D
Sbjct: 257 KVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKD 316

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
             +  A +V + M  +G+K  +     ++  L   G + EA   +D M+ S   PN   +
Sbjct: 317 ENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITY 376

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
           ++L++   +K     A +L D    +    ++ ++  +L      GK   A+ +   ++E
Sbjct: 377 NALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLE 436

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           KG + +  + + LI G  +EG  ++  ++L+ M
Sbjct: 437 KGFLPNASTYNCLIVGFCREGKMEEVKNLLNEM 469


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/501 (24%), Positives = 225/501 (44%), Gaps = 32/501 (6%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           K R L   F+ N + + +   K  +  +     ++R G+ +H+  T+  +I    R  ++
Sbjct: 78  KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI-SHNLYTYNILINCFCRRSQI 136

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  +L  M K G +        L+  Y     + ++V + D M ++G      ++  L
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              +    +   A    ++M+  G +P   TY V++ G      ++ A      M++  I
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             +VV Y+T+I+   +++  D+A  LF EM+ K + P VI+Y+++I      ER  DA R
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +  +M    + PN VT+ AL+      GK+VE +K+  EM++R I P D   +  L+   
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP-DIFTYSSLINGF 375

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII--L 370
           C    L+ A  + + MI          Y  LI  FCKA+  D  ++L  ++ ++ ++   
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435

Query: 371 RPQSTL--------DMEAS-----------------SYNPMIQHLCHNGQTGKAEIFFRQ 405
              +TL        D + +                 +YN ++  LC NG+  KA + F +
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-E 494

Query: 406 LMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            +++  ++P    +N +I G  K G  +  +++   +  +GV  D   Y  +I  + RKG
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554

Query: 464 EPADAKTALDSMIEDGHSPAS 484
              +A      M EDG  P S
Sbjct: 555 LKEEADALFRKMREDGPLPDS 575



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/534 (23%), Positives = 236/534 (44%), Gaps = 19/534 (3%)

Query: 124 RSVKSYDALFKLILRRGRYMM----AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           R+  S    ++ ILR G + M    A   F  M+     P+   +N +L       K + 
Sbjct: 44  RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
            I   E M+  GIS ++ TYN +IN + R  ++  A  L  +M +   EP++++ ++++ 
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY   +R  DA+ + D+M     +P+ +T+T L+ GL    K  E   ++  MV+R   P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
              +  + + G+ CK G ++ A ++L  M    I      Y  +I++ CK    D A+ L
Sbjct: 224 NLVTYGVVVNGL-CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAF 417
             ++  K +  RP         +Y+ +I  LC+  +   A      ++++ + +P  V F
Sbjct: 283 FTEMENKGV--RPNVI------TYSSLISCLCNYERWSDASRLLSDMIERKI-NPNVVTF 333

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI    KEG    A ++   M +R +  D   Y  LI  +       +AK   + MI 
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
               P    + +++    +  R+     + + M ++G+  N      ++         + 
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A      M+  G  PN   +++LL  L + GK   A+ + ++         + +Y  +++
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
            +  AGK  + + +   +  KG   D    + +I+G  ++G  ++AD L R +R
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 87/175 (49%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI  + K   + E V++F  M Q G+  +  +Y  L     +      A+  F +M+
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S+G+ P   TYN +L G   + KLE A+  FE ++   +   + TYN MI G  +  K++
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
           +   LF  +  K ++P VI Y TMI G+      ++A  +F +M+     P++ T
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 136/604 (22%), Positives = 260/604 (43%), Gaps = 54/604 (8%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  M+    R G++  AR ++  MP      D   F  LI +   +G + +++ +FD M
Sbjct: 221 TYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDDM 277

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G   SV +Y  L     +   Y  A    ++M ++G EP   TYNV++        +
Sbjct: 278 LHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDV 337

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT------- 230
           + A+    ++ S G   D VTY  ++      ++  E E+L AEM   N  P        
Sbjct: 338 DEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTI 397

Query: 231 ----------------------------VISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
                                       +++Y++++ G   V R DDA+ +   +KS+  
Sbjct: 398 VTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 457

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           KP+ + YT +L GLC   +    ++++ EM+    PP D   F  ++   C+ G ++ A 
Sbjct: 458 KPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPP-DEVTFNTVVASLCQKGLVDRAI 516

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V++ M       +   Y  +I+  C     D A++LL  L  +    +P      +  +
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL--QSCGCKP------DIVT 568

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           +N +++ LC   +   AE     +M+     D + FN +I    ++G    A E +KIM 
Sbjct: 569 FNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMA 628

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
             G   ++  Y  ++++ L+ G+ A A   L S + +G +P    + +V+ +L + G+++
Sbjct: 629 ENGCVPNSSTYSIVVDALLKAGK-AQAALELLSGMTNG-TPDLITYNTVISNLTKAGKME 686

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A  +++ MV  G+  +      +   +      + A+  +  +  +G  P+   ++ +L
Sbjct: 687 EALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVL 746

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
                  +T  A+      +   C+ D ++Y  +L+A LA G  L+    L   +   GV
Sbjct: 747 LGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEA-LAYGGLLDEAKRLLASLCSLGV 805

Query: 619 TDWK 622
            D K
Sbjct: 806 LDKK 809



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 129/557 (23%), Positives = 237/557 (42%), Gaps = 59/557 (10%)

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIE--PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            + +++RG    A   F+ M S G    P     N+++       ++  A R F  +   
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G S  VVTYNTM+NGY R  ++++A +L   M      P   ++  +I+      R  DA
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDA 270

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           L +FD+M      P+ VTY+ LL   C      +   +L EM  +   P D   +  L+ 
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEP-DIVTYNVLIN 329

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             C  G ++ A ++L  +       +A  Y  ++++ C +E +    +LL ++       
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA- 388

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGN 429
                   +  ++N ++  LC  G   +A      + + G V D V +++++ G    G 
Sbjct: 389 -------PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGR 441

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            D A E++  +   G   D  AY  +++      +   A+  +  M+     P    F +
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI-DL---- 544
           V+ SL + G V  A RV++ M E G   ++     I++ L     +++A+  + DL    
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561

Query: 545 ------------------------------MMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
                                         MM+S   P+   F+++++ L +KG    A+
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           + L       C+ + ++Y  V+DALL AGK   A  +L  +    G  D  + + +I+ L
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNL 679

Query: 632 NQEGNTKQA-DILSRMI 647
            + G  ++A D+L  M+
Sbjct: 680 TKAGKMEEALDLLRVMV 696



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/273 (19%), Positives = 105/273 (38%), Gaps = 34/273 (12%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L      + A++    ++  G    D  T   +++ L  V +   A  ++ +M
Sbjct: 534 YNCIIDGLCNESCIDDAMELLSDLQSCGC-KPDIVTFNTLLKGLCGVDRWEDAEQLMANM 592

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            +     DE  F  +I S  +KG++ ++++   IM + G   +  +Y  +   +L+ G+ 
Sbjct: 593 MRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKA 652

Query: 143 MMAKRYFNKM---------------------------------LSEGIEPTRHTYNVMLW 169
             A    + M                                 +S G+ P   TY  + +
Sbjct: 653 QAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAY 712

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G       + A+R    ++  G+S D   YN ++ G+ R ++ D A   FA M      P
Sbjct: 713 GVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMP 772

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
              +Y  +++        D+A R+   + S  V
Sbjct: 773 DESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805


>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
 gi|224029903|gb|ACN34027.1| unknown [Zea mays]
 gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
          Length = 819

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 151/651 (23%), Positives = 272/651 (41%), Gaps = 72/651 (11%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           +HA+  FRW++    +    + +  MI +  R  K++ AR +  +M +   + + D +  
Sbjct: 134 KHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNS 193

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI ++ + G    ++ I D M++  +  S  +Y+ +       G +  A     KM   G
Sbjct: 194 LIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENG 253

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   T+N++L  F    +   AI +FE MKS  ++ D  T N +I+   +     EA 
Sbjct: 254 VGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAI 313

Query: 217 KLFAEMKEK--NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           +LF  M+E+     P V++YT+++  Y    +A++   +FD M +  V+PN V+Y ALL 
Sbjct: 314 ELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLG 373

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
                G   E  +  + + +  + P D   +  LL    +S     A +V   M + +  
Sbjct: 374 AYASHGMHTEALETFKLLKQNGLRP-DIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACK 432

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLD-------------------------KLVEKEII 369
                Y  LI+ +  A M   AI LL                          +L + +II
Sbjct: 433 PNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDII 492

Query: 370 LRPQST--LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHS 425
           L    +  + +   +YN  I      G   KA + +   M+ G + P  V +N LI G  
Sbjct: 493 LAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTS-MRAGNVKPDAVTYNILISGSC 551

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K G    + +  + M    +    + Y  +I SY+++G+  +A +  +SM E G  P   
Sbjct: 552 KLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVL 611

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            + +++++  +DG  + A  + K M   G + +  + + ++EAL   G  E  L  I+ M
Sbjct: 612 TYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFM 671

Query: 546 MQ--------------------------------------SGSVPNFDSLLSVLSEKGKT 567
            Q                                      S S    + +L+ L + G+T
Sbjct: 672 KQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLDSSLSSISFGTLNHILNFLGKCGRT 731

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
            + +KL    +     + L++Y  +L  LL  GK    Y  + + ME  GV
Sbjct: 732 ESMMKLFYKMVTSCSTVGLSTYTILLRNLLIVGK-WRKYVEVLQWMEDAGV 781



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 133/601 (22%), Positives = 259/601 (43%), Gaps = 51/601 (8%)

Query: 2   AERAWTTRLQNKI-RALVP--QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRET 58
            +  W   + + + RA +P  +  +N V N    A N + AL+  + +   G+   D  T
Sbjct: 202 GQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGV-GPDLIT 260

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           H  ++       + + A      M    V  D     ++I    K G+  E++++F+ M+
Sbjct: 261 HNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMR 320

Query: 119 Q--LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           +        V +Y ++       G+    K  F+ M++EG+ P   +YN +L G + S  
Sbjct: 321 ERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALL-GAYASHG 379

Query: 177 LET-AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           + T A+  F+ +K  G+  D+V+Y +++N Y R  + ++A ++F EM++   +P  +SY 
Sbjct: 380 MHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYN 439

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I  Y +     +A+ +  EM+   ++P+ ++ + LL       ++ ++  +L     R
Sbjct: 440 ALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSR 499

Query: 296 YIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
            I  + N+V +   +G     G    A  +  +M   ++  +A  Y ILI   CK   Y 
Sbjct: 500 GI--QLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYV 557

Query: 355 RAIKLLDKLVEKEIILRP------------QSTLDMEASSYNPMIQHLCH---------- 392
            ++K  + +++  I L              Q  L   AS++N M +  C           
Sbjct: 558 ESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLI 617

Query: 393 -----NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
                +G   +A   F+++   G   D +  ++L+   +K G P+   ++++ M ++ + 
Sbjct: 618 KAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQ 677

Query: 447 RDADAYICLIES--YLRKGEPADAKTALDSMIEDGHSPASSL----FRSVMESLFEDGRV 500
            +  AY  +I S   LR     D KTA   +IE   S  SS+       ++  L + GR 
Sbjct: 678 LNQKAYFEIISSCTMLR-----DWKTA-SQIIEHLDSSLSSISFGTLNHILNFLGKCGRT 731

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
           ++  ++   MV       L     +L  LL+ G   + +  +  M  +G  P      SV
Sbjct: 732 ESMMKLFYKMVTSCSTVGLSTYTILLRNLLIVGKWRKYVEVLQWMEDAGVCPTLYMYQSV 791

Query: 561 L 561
           L
Sbjct: 792 L 792



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 102/552 (18%), Positives = 221/552 (40%), Gaps = 46/552 (8%)

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
           D++ ++I  + +   V ++  +F  M++   + +  +Y++L     R G++  A    + 
Sbjct: 154 DIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDD 213

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M    I P+R TYN ++     +   + A+   + M   G+  D++T+N +++ +    +
Sbjct: 214 MQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQ 273

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS--FDVKPNAVTY 269
             +A   F  MK   + P   +   +I   V +    +A+ +F+ M+       P+ VTY
Sbjct: 274 YSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTY 333

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           T+++      G+    + V   MV   + P   S +  LLG     G    A +  K + 
Sbjct: 334 TSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVS-YNALLGAYASHGMHTEALETFKLLK 392

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           +  +  +   Y  L+  + ++   ++A ++ +++  ++   +P         SYN +I  
Sbjct: 393 QNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEM--RKNACKPNKV------SYNALIDA 444

Query: 390 LCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
               G   +A     ++ + G+  D ++ + L+    +         I+     RG+  +
Sbjct: 445 YGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLN 504

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
             AY   I SYL  G+   A     SM      P +  +  ++    + GR   + +  +
Sbjct: 505 TVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFE 564

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTI 568
            M++  +    ++ + ++ + + +G + EA    + M ++G  P                
Sbjct: 565 DMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFP---------------- 608

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKL 627
                           D+ +Y  ++ A    G    A+  LFK ME  G   D      L
Sbjct: 609 ----------------DVLTYTTLIKAYSDDGSWRRAWD-LFKEMENNGTQPDAIVCSSL 651

Query: 628 IAGLNQEGNTKQ 639
           +  LN+ G  ++
Sbjct: 652 MEALNKGGQPER 663



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 152/384 (39%), Gaps = 17/384 (4%)

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           +G +     V R M  +      N ++  ++ +  +   ++ A  +   M          
Sbjct: 130 SGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTD 189

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI    +A  +  AI ++D +    I   P S      ++YN +I      G   K
Sbjct: 190 TYNSLIHAHARAGQWCWAINIMDDMQRAAI---PPSR-----TTYNNVINACGAAGNWKK 241

Query: 399 AEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDS-AFEIVKIMGRRGVPRDADAYICLIE 457
           A    +++ + GV   +  +N++    K G   S A    +IM    V  D      +I 
Sbjct: 242 ALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIH 301

Query: 458 SYLRKGEPADAKTALDSMIEDGHS--PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
             ++ G   +A    +SM E   +  P    + S+M S    G+ +    V   MV +GV
Sbjct: 302 CLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGV 361

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA---AVK 572
           + N+     +L A    G   EAL    L+ Q+G  P+  S  S+L+  G++     A +
Sbjct: 362 RPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKARE 421

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           + +      C  +  SY  ++DA  +AG    A S+L ++ + G   D  S   L+    
Sbjct: 422 VFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTAC- 480

Query: 633 QEGNTKQADILSRMIRGEMSRGSQ 656
             G  KQ   +  ++    SRG Q
Sbjct: 481 --GRCKQLTKIDIILAAAKSRGIQ 502



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/262 (19%), Positives = 99/262 (37%), Gaps = 35/262 (13%)

Query: 48  RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV 107
           RAG    D  T+  +I    ++G+   +     DM    +   ++++  +I SY K+G +
Sbjct: 532 RAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKL 591

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
            E+   F+ MK+ G    V +Y  L K     G +  A   F +M + G +P     + +
Sbjct: 592 TEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSL 651

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTY---------------------------- 199
           +       + E  ++  E MK + I L+   Y                            
Sbjct: 652 MEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLDSSLS 711

Query: 200 -------NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
                  N ++N   +  + +   KLF +M        + +YT +++  + V +    + 
Sbjct: 712 SISFGTLNHILNFLGKCGRTESMMKLFYKMVTSCSTVGLSTYTILLRNLLIVGKWRKYVE 771

Query: 253 IFDEMKSFDVKPNAVTYTALLP 274
           +   M+   V P    Y ++LP
Sbjct: 772 VLQWMEDAGVCPTLYMYQSVLP 793


>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
 gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 205/411 (49%), Gaps = 12/411 (2%)

Query: 24  NLVYNVLHGAKNSEH-ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +LV+  L    N+   AL FFRW E+   F +  E++  +IE LG++ + N    ++ DM
Sbjct: 6   SLVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVTDM 65

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            +KG+  +++ F ++   Y +   V+E+V  F  M++ G++      + L   + +  + 
Sbjct: 66  KQKGL-LNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQV 124

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F+KM   G      +Y ++L G+     L   +  + +MK  G   DVVTY  +
Sbjct: 125 ERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGIL 184

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           IN + + ++ D+A +LF EM+ KN +P+   Y T+I G  A +R  +AL  F+  K+   
Sbjct: 185 INAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGF 244

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P A TY A++   C + +M +VQ+ + EM +  + P   + +  +L    ++G    A 
Sbjct: 245 VPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSART-YDIILHHLIRAGKTKIAY 303

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V + M           Y I++  FC  +  D AIK+ D++  K I+      + M    
Sbjct: 304 SVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGIL----PVMHM---- 355

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDS 432
           ++ +I  LCH  +  +A ++F++++  G+  P   F+NL +    EG  D+
Sbjct: 356 FSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDT 406



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 89/398 (22%), Positives = 161/398 (40%), Gaps = 17/398 (4%)

Query: 180 AIRFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           A+ FF    K +G      +Y+ +I    + K+ +    L  +MK+K +     ++  + 
Sbjct: 22  ALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKGL-LNKETFALIS 80

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           + Y    +  +A+  F +M+ F +K  +     LL  LC + ++   Q V  +M +R   
Sbjct: 81  RRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFV 140

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
             D   +  LL    +  +L+   +V   M       +   YGILI   CK+  YD AI+
Sbjct: 141 A-DIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIE 199

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-- 416
           L  ++  K     P          Y  +I  L    +  +A  FF +L K     P A  
Sbjct: 200 LFHEMEAKNCKPSPHI--------YCTLINGLGAEKRLSEALEFF-ELSKASGFVPEAPT 250

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N ++  +      D     +  M + GV   A  Y  ++   +R G+   A +    M 
Sbjct: 251 YNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMS 310

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
            +G  P+ S +  ++     + RV  A +V   M  KG+   + + + ++ +L     ++
Sbjct: 311 CEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLD 370

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           EA      M+  G  P    F +L   L ++GK    V
Sbjct: 371 EACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVV 408



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 50/242 (20%), Positives = 92/242 (38%), Gaps = 33/242 (13%)

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAF 434
           L +E+S  N ++  LC + Q  +A++ F ++ K+G V D  ++  L+ G  +E N     
Sbjct: 104 LKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLM 163

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           E+   M   G   D   Y  LI ++ +     DA      M      P+  ++ +++  L
Sbjct: 164 EVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGL 223

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF 554
             + R+  A    +     G          ++ A      +++    ID M + G  P+ 
Sbjct: 224 GAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPS- 282

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
                                            +Y+ +L  L+ AGKT  AYS+  K+  
Sbjct: 283 -------------------------------ARTYDIILHHLIRAGKTKIAYSVFQKMSC 311

Query: 615 KG 616
           +G
Sbjct: 312 EG 313



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 56/136 (41%)

Query: 48  RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV 107
           R G       T+  ++  L R GK   A  +   M  +G Q     +E+++  +  +  V
Sbjct: 275 RKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRV 334

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
             ++K++D MK  G+   +  +  L   +    +   A  YF +ML  GI P    ++ +
Sbjct: 335 DMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNL 394

Query: 168 LWGFFLSLKLETAIRF 183
                   K +T + F
Sbjct: 395 KQNLLDEGKKDTVVVF 410


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 233/491 (47%), Gaps = 13/491 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++++L   G++  AR +  +M       D   + +LI  Y   G ++ +VK+ D M   G
Sbjct: 268 LLKVLCGAGRVEDARQLFDEMASPP---DVVTYGILIHGYCALGELENAVKLLDDMVARG 324

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           VE +   Y ++  L+  +GR   A      M+   +      Y  +L GF     L +A 
Sbjct: 325 VEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSAR 384

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R+F++M+ +G++ D VTY T+ING  R  ++ EAEK+  EM  + ++   ++YT ++ GY
Sbjct: 385 RWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGY 444

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               +  +A ++ + M    V PN VTYTAL  GLC  G +    ++L EM  + +   +
Sbjct: 445 CKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL-ELN 503

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK+G+L+ A   +  M    +  +   Y  LI+  CK+   DRA  LL 
Sbjct: 504 ACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQ 563

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           ++++  I  +P         +YN ++   C +G+    +     +++K +  +   +N+L
Sbjct: 564 EMLDNGI--KPTIV------TYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSL 615

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           ++ +    N  S  EI K M  R V  + + Y  LI+ + +     +A+   + MIE G 
Sbjct: 616 MKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGF 675

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
              +S + +++  L +  +   A ++   M ++G     D+    ++      ++E  L 
Sbjct: 676 RLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLA 735

Query: 541 RIDLMMQSGSV 551
             D ++++  V
Sbjct: 736 LCDELVEASIV 746



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 169/355 (47%), Gaps = 5/355 (1%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRW---VERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
            D  +   VL G  N    +   RW   ++R GL   D  T+  +I  L R G+L  A  
Sbjct: 362 LDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLAT-DGVTYTTLINGLCRAGELKEAEK 420

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L +M  + +  DE  + VL++ Y K+G + E+ ++ + M Q GV  +V +Y AL   + 
Sbjct: 421 VLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLC 480

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           ++G    A    ++M ++G+E    TYN ++ G   +  L+ A+R   DM + G+  DV 
Sbjct: 481 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVY 540

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TY T+I+   +  ++D A  L  EM +  I+PT+++Y  ++ G+    R +   ++ + M
Sbjct: 541 TYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWM 600

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
              ++ PNA TY +L+   C    M    ++ + M  R + P +N+  + + G  CK+  
Sbjct: 601 LEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG-HCKARS 659

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           +  A      MI       A  Y  LI    K + +  A KL   + ++     P
Sbjct: 660 MKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEP 714



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 195/409 (47%), Gaps = 21/409 (5%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           GI P+    N +L      L L+ AI  F+ +  +    +V +YN ++       ++++A
Sbjct: 230 GISPSPEACNAVLS----RLPLDEAIELFQGLPDK----NVCSYNILLKVLCGAGRVEDA 281

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            +LF EM      P V++Y  +I GY A+   ++A+++ D+M +  V+PNA  YT+++  
Sbjct: 282 RQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVAL 338

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LCD G++ +   V+ +MV   +   D +V+  +L   C  G L +A      M R  + T
Sbjct: 339 LCDKGRVSDALTVVEDMVHHKVI-LDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLAT 397

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   Y  LI   C+A     A K+L +++ +         LD++  +Y  ++   C  G+
Sbjct: 398 DGVTYTTLINGLCRAGELKEAEKVLQEMLARR--------LDVDEVTYTVLVDGYCKRGK 449

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A      ++++GV  + V +  L  G  K+G+  +A E++  M  +G+  +A  Y  
Sbjct: 450 MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 509

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI    + G    A   +  M   G  P    + +++++L + G +  A  +++ M++ G
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
           +K  +     ++    M G VE     ++ M++    PN  +  S++ +
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQ 618



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 184/395 (46%), Gaps = 10/395 (2%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  ++ +L   G+++ A  ++ DM    V  DE ++  ++  +  KG +  + + FD M+
Sbjct: 332 YTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQ 391

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           + G+     +Y  L   + R G    A++   +ML+  ++    TY V++ G+    K+ 
Sbjct: 392 RKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMA 451

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A +    M  RG++ +VVTY  + +G  +   +  A +L  EM  K +E    +Y ++I
Sbjct: 452 EAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLI 511

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G       D A+R   +M +  +KP+  TYT L+  LC +G++     +L+EM++  I 
Sbjct: 512 NGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIK 571

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P     +  L+   C SG +     +L+ M+  +I   A  Y  L++ +C         +
Sbjct: 572 PTI-VTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTE 630

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
           +   +  + +        +   ++YN +I+  C      +A+ F  ++++KG  L   ++
Sbjct: 631 IYKGMCSRNV--------EPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSY 682

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           + LIR  +K+     A ++   M + G   + D Y
Sbjct: 683 SALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVY 717



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 190/406 (46%), Gaps = 21/406 (5%)

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           +DEA +LF  + +KN    V SY  ++K      R +DA ++FDEM S    P+ VTY  
Sbjct: 247 LDEAIELFQGLPDKN----VCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGI 299

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           L+ G C  G++    K+L +MV R + P + +V+  ++ + C  G ++ A  V++ M+  
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEP-NATVYTSVVALLCDKGRVSDALTVVEDMVHH 358

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            +  +   Y  ++  FC       A +  D++  K         L  +  +Y  +I  LC
Sbjct: 359 KVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRK--------GLATDGVTYTTLINGLC 410

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G+  +AE   ++++ + + +D V +  L+ G+ K G    AF++   M +RGV  +  
Sbjct: 411 RAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVV 470

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  L +   ++G+   A   L  M   G    +  + S++  L + G +  A R M  M
Sbjct: 471 TYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM 530

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKT 567
              G+K ++     +++AL   G ++ A   +  M+ +G  P    ++ L++     G+ 
Sbjct: 531 DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRV 590

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
               KLL++ L ++   +  +Y  ++      G  + + + ++K M
Sbjct: 591 EGGKKLLEWMLEKNIHPNATTYNSLMKQ-YCIGNNMKSTTEIYKGM 635



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 3/214 (1%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L  A   + A++    ++ AGL   D  T+  +I+ L + G+L+ A  +L +M
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGL-KPDVYTYTTLIDALCKSGELDRAHDLLQEM 565

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G++     + VL+  +   G V+   K+ + M +  +  +  +Y++L K        
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNM 625

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 +  M S  +EP  +TYN+++ G   +  ++ A  F  +M  +G  L   +Y+ +
Sbjct: 626 KSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSAL 685

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNI--EPTVISY 234
           I   N+ KK  EA KLF +M+++    EP V ++
Sbjct: 686 IRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 11/167 (6%)

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK--ILEALLMRGHVEEALGRIDL 544
           +  +++ L   GRV+ A ++   M         D+V    ++      G +E A+  +D 
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMASPP-----DVVTYGILIHGYCALGELENAVKLLDD 319

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M+  G  PN   + S++++L +KG+   A+ +++  +    I+D A Y  VL      G 
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
            ++A     ++  KG  TD  +   LI GL + G  K+A+ +L  M+
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML 426



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 12/214 (5%)

Query: 431 DSAFEIVKIMGRRGVP-RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
           D A E+ +     G+P ++  +Y  L++     G   DA+   D M      P    +  
Sbjct: 248 DEAIELFQ-----GLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGI 299

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++      G ++ A +++  MV +GV+ N  +   ++  L  +G V +AL  ++ M+   
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
            + +   + ++LS    KG  ++A +  D    +    D  +Y  +++ L  AG+   A 
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAE 419

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +L +++ +    D  +   L+ G  + G   +A
Sbjct: 420 KVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEA 453


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 224/503 (44%), Gaps = 50/503 (9%)

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           +  +Y  +  +   M++ G +P       ++ GFF   K+E AI+  E ++  G   DV 
Sbjct: 89  KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVF 147

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            YN +I+G+ +  ++D A K+   MK++  EP V++Y  +I  +    R D ALR+ D++
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
              + KP  +TYT L+      G + E  K+L EM+ R + P D   +  ++   CK G 
Sbjct: 208 LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRP-DRYTYNVVVNGMCKEG- 265

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                                             M DRA + L ++ +   +        
Sbjct: 266 ----------------------------------MLDRAFEFLSRISKNGCV-------- 283

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
              S+YN +++ L + G+    E     ++ KG   +P+ ++ LI    ++G  D A  +
Sbjct: 284 AGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNV 343

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +K+M  + +  D  +Y  LI +  R+G+   A   LD MI  GH P    + S++ SL +
Sbjct: 344 LKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCK 403

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
           +G    A  + + + E G   N      +  AL   G    ALG I  M+ +G  P+   
Sbjct: 404 NGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEIT 463

Query: 554 FDSLLSVLSEKGKTIAAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
           ++SL+S L   G    A++LL D      C   + SY  VL  L    + ++A  +L  +
Sbjct: 464 YNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAM 523

Query: 613 MEKGGVTDWKSSDKLIAGLNQEG 635
           + +G + +  +   LI G+   G
Sbjct: 524 VNEGCLPNETTYTLLIQGIGFAG 546



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 207/463 (44%), Gaps = 21/463 (4%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           K  E A+Q    +E+ G    D   +  +I    +  +++HA  +L  M K+G + D   
Sbjct: 126 KKIEKAIQVMEILEKHG--KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVT 183

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +LI ++  +G +  ++++ D + +   + +V +Y  L +  + +G    A +  ++ML
Sbjct: 184 YNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEML 243

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S G+ P R+TYNV++ G      L+ A  F   +   G    V TYN ++       K +
Sbjct: 244 SRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWE 303

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
             EKL ++M  K  EP  I+Y+T+I       + D+A  +   MK   + P+  +Y  L+
Sbjct: 304 YGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLI 363

Query: 274 PGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
             LC  GK+    + L +M+   ++P  D   +  +L   CK+G+ + A ++ + +  + 
Sbjct: 364 SALCREGKVDLAIEFLDDMISGGHLP--DILSYNSILASLCKNGNADEALNIFEKLGEVG 421

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
            P  AG Y  L      +    RA+ ++ +++   I        D +  +YN +I  LC 
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGI--------DPDEITYNSLISCLCR 473

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           +G   +A      + +     P  +++N ++ G  K      A E++  M   G   +  
Sbjct: 474 DGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNET 533

Query: 451 AYICLIESYLRKG------EPADAKTALDSMIEDGHSPASSLF 487
            Y  LI+     G      E A+    +D++ ED       +F
Sbjct: 534 TYTLLIQGIGFAGWRYDAMELANLLVNMDAISEDSFKRFQKIF 576



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 195/444 (43%), Gaps = 48/444 (10%)

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           K DE+      M  +  +P VI  T +IKG+  +++ + A+++ + ++    KP+   Y 
Sbjct: 92  KYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYN 150

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           A++ G C A ++    KVL  M +R   P D   +  L+G  C  G L+ A  V+  +++
Sbjct: 151 AVISGFCKADRVDHASKVLDRMKKRGFEP-DVVTYNILIGNFCGRGRLDLALRVMDQLLK 209

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
            +       Y ILIE        D A+KLLD+++ +   LRP                  
Sbjct: 210 DNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG--LRP------------------ 249

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
                                 D   +N ++ G  KEG  D AFE +  + + G      
Sbjct: 250 ----------------------DRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVS 287

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  L+   L +G+    +  +  M+  G  P    + +++ +L  DG++  A  V+K M
Sbjct: 288 TYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVM 347

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
            EK +  +      ++ AL   G V+ A+  +D M+  G +P+   ++S+L+ L + G  
Sbjct: 348 KEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNA 407

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A+ + +      C  +  SY  +  AL ++G  + A  ++ +++  G   D  + + L
Sbjct: 408 DEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSL 467

Query: 628 IAGLNQEGNTKQA-DILSRMIRGE 650
           I+ L ++G   QA ++L  M   E
Sbjct: 468 ISCLCRDGLVDQAIELLVDMFESE 491


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 244/564 (43%), Gaps = 38/564 (6%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L  + DH LV  VL         +QFF+W  +   F HD  T++ +I  
Sbjct: 74  WGPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHC 133

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L   G L      + +M +            +++  GK  +V +++ IF  +K    + +
Sbjct: 134 LDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPT 193

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFF 184
             +Y+++  ++++ G +      +N+M +EG   P   TY+ ++  F    + ++AI  F
Sbjct: 194 SNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLF 253

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           ++MK  G+      Y T++  Y +  ++++A  L  EMKEK    TV +YT +IKG    
Sbjct: 254 DEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKA 313

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK---D 301
            + ++A  IF  M     KP+ V    L+  L  AG++ +  K+  EM      P     
Sbjct: 314 GKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTY 373

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           N+V   L   + ++     A    + M    +   +  Y ILI+ FCK    ++A+ LL+
Sbjct: 374 NTVIKALFESKARASE---AFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLE 430

Query: 362 KLVEKEIILRPQSTLDM---------------------------EASSYNPMIQHLCHNG 394
           ++ EK     P +   +                            A  Y  MI+HL   G
Sbjct: 431 EMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCG 490

Query: 395 QTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +A   F ++ K G   D  A+N L+ G  + G  D A  +++ M   G   D +++ 
Sbjct: 491 RLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHN 550

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            ++  + R G P  A      M      P    + +V+  L   G  + A+++MK M  K
Sbjct: 551 IILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSK 610

Query: 514 GVKENLDLVAKILEALLMRGHVEE 537
           G + +L   + ILEA+   G ++E
Sbjct: 611 GFEYDLITYSSILEAV---GKIDE 631



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 103/481 (21%), Positives = 200/481 (41%), Gaps = 15/481 (3%)

Query: 173 LSLKLETAIRFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           + +++   I+FF+   K R    D  TY  +I+  +    + E  K   EM         
Sbjct: 100 IDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGP 159

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
              + ++K     +  + AL IF ++K    KP + TY +++  L   G   +V ++  E
Sbjct: 160 ADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNE 219

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M        D   +  L+    K G  ++A  +   M    +   A  Y  ++  + K  
Sbjct: 220 MCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLG 279

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             ++A+ L+ ++ EK   L           +Y  +I+ +   G+  +A   F  ++K+G 
Sbjct: 280 RVEKALGLVQEMKEKGCALT--------VYTYTELIKGVGKAGKVEEAYSIFMNMLKEGC 331

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES-YLRKGEPADAK 469
             D V  NNLI    K G    A ++ + M       +   Y  +I++ +  K   ++A 
Sbjct: 332 KPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAF 391

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              + M E+G  P+S  +  +++   +  RV+ A  +++ M EKG          ++ AL
Sbjct: 392 LWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINAL 451

Query: 530 LMRGHVEEALGRIDLMMQS---GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
                 E A      + ++    S   +  ++  L + G+   AV L +      C  D+
Sbjct: 452 GKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDV 511

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSR 645
            +Y  ++  ++  G T  A+S+L  + E G   D  S + ++ G  + G  K A ++ +R
Sbjct: 512 YAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTR 571

Query: 646 M 646
           M
Sbjct: 572 M 572


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 135/564 (23%), Positives = 242/564 (42%), Gaps = 50/564 (8%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L+ + DH LV  V+         +QFFRW  +   + HD  T++ +I  
Sbjct: 73  WGPDAEKALEVLMLRVDHWLVREVMKTDIGVNVKMQFFRWAAKRRNYEHDTSTYMALIRC 132

Query: 66  LGRVGKLNHARCILLDMPKK--GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
           L  V +      ++ +M +    V    ++ EV +   G   +V +++ IF  +K    +
Sbjct: 133 LEVVEQYGEMWKMIQEMVRNPICVVTPTELSEV-VRMLGNAKMVSKAIAIFYQIKTRKCQ 191

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG--------------------------- 156
            + ++Y+++  +++  G+Y      +N+M +EG                           
Sbjct: 192 PTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQ 251

Query: 157 ---------IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
                    ++PT   Y +++  FF    +  A+  FE+M+ +    DV TY  +I G  
Sbjct: 252 LLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLG 311

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           +  ++DEA   F EM+ +   P  +    MI       R DDA+++F EM +    P+ V
Sbjct: 312 KAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVV 371

Query: 268 TYTALLPGLCDA-GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           TY  ++  L ++  +  EV      M E  I P   +  + + G  CK+  +  A  +L+
Sbjct: 372 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGF-CKTNRMEKAMMLLE 430

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M     P     Y  LI+   KA+ YD A +L  +L E        +     A  Y  M
Sbjct: 431 EMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE--------NCGSSSARVYAVM 482

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I+HL   G+   A   F ++ K G   D  A+N L+ G ++ G  D A   ++ M   G 
Sbjct: 483 IKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGC 542

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D ++Y  ++    + G P  A   L +M +    P    + +V+ +L   G  + A++
Sbjct: 543 IPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAK 602

Query: 506 VMKSMVEKGVKENLDLVAKILEAL 529
           +M+ M   G + +L   + ILEA+
Sbjct: 603 LMEEMNTLGFEYDLITYSSILEAI 626



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 204/466 (43%), Gaps = 22/466 (4%)

Query: 1   MAERAWTTRLQNKIRALVP--QFDHNLVYNVLH-GAKNSEHALQFFRWVERAGLFNHDRE 57
           M  +A     Q K R   P  Q  ++++  ++H G     H L  +  +   G    D  
Sbjct: 174 MVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHEL--YNEMSTEGHCFPDTM 231

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I    ++G+ + A  +L +M + G+Q    ++ +LI  + K   V  ++ +F+ M
Sbjct: 232 TYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEM 291

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +       V +Y  L + + + GR   A  +F +M  EG  P     N M+     + +L
Sbjct: 292 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRL 351

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMING-YNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           + A++ F++M +      VVTYNT+I   +    +  E    F  MKE  I P+  +Y+ 
Sbjct: 352 DDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 411

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G+    R + A+ + +EM      P    Y +L+  L  A +     ++ +E+ E  
Sbjct: 412 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471

Query: 297 --IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
                +  +V +K LG   K+G L+ A ++   M +L    +   Y  L+    +  M D
Sbjct: 472 GSSSARVYAVMIKHLG---KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 528

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A+  + ++ E   I         + +SYN ++  L   G   +A       MK+  + P
Sbjct: 529 EALSTMRRMQEHGCIP--------DINSYNIILNGLAKTGGPHRAMEMLSN-MKQSTVRP 579

Query: 415 --VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
             V++N ++   S  G  + A ++++ M   G   D   Y  ++E+
Sbjct: 580 DVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEA 625



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 110/497 (22%), Positives = 207/497 (41%), Gaps = 55/497 (11%)

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI---EPTVISYTTMIKGYVAV 244
           K R    D  TY  +I      ++  E  K+  EM    I    PT +S    + G   +
Sbjct: 115 KRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKM 174

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNS 303
                A+ IF ++K+   +P A  Y +++  L   G+  +V ++  EM  E +  P D  
Sbjct: 175 --VSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFP-DTM 231

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  L+   CK G  ++A  +L  M    +      Y +LI  F K +    A+ L +++
Sbjct: 232 TYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEM 291

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
             +    RP      +  +Y  +I+ L   G+  +A  FF ++ ++G   D V  NN+I 
Sbjct: 292 --RHQYCRP------DVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMIN 343

Query: 423 GHSKEGNPDSAFEIVKIMGR-RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
              K G  D A ++ + MG  R +P        +   +  K   ++  +  + M E G S
Sbjct: 344 FLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 403

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKG--------------------------- 514
           P+S  +  +++   +  R++ A  +++ M EKG                           
Sbjct: 404 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 463

Query: 515 ---VKENLDLVAKILEALLMR-----GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
              +KEN    +  + A++++     G +++A+   D M + G  P+   +++L+S L+ 
Sbjct: 464 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G    A+  +       CI D+ SY  +L+ L   G    A  +L  + +     D  S
Sbjct: 524 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 583

Query: 624 SDKLIAGLNQEGNTKQA 640
            + ++  L+  G  ++A
Sbjct: 584 YNTVLGALSHAGMFEEA 600


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/584 (22%), Positives = 244/584 (41%), Gaps = 79/584 (13%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           H  K+ + A+ FF ++ R+  F    + + K+I +  R+ + + A  +   M  + +  +
Sbjct: 82  HYFKSLDDAIDFFDYMVRSRPFYTAVDCN-KVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD----------------ALFK 134
              F +LI+ +     +  S+  F  + +LG +  V +++                ALF 
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            ++  G ++ A   F++M+  G+ P   T+N ++ G  L  ++  A      M  +G+ +
Sbjct: 201 YMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           DVVTY T++NG  +      A  L ++M+E +I+P V+ Y+ +I          DA  +F
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM    + PN  TY  ++ G C  G+  + Q++LR+M+ER I P D   F  L+    K
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP-DVLTFNALISASVK 378

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII----- 369
            G L  A  +   M+   I  +   Y  +I  FCK   +D A  + D +   +++     
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438

Query: 370 ----------------LRPQS--TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
                           LR  S   L    ++YN +I   C       A+  F++++  GV
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498

Query: 412 ------------------------------------LDPVAFNNLIRGHSKEGNPDSAFE 435
                                               LD VA+N +I G  K    D A++
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   +   GV  D   Y  +I  +  K   +DA      M ++GH P +S + +++    
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           + G +  +  ++  M   G   +     K++  L+  G ++++ 
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDA-FTIKMVADLITDGRLDKSF 661



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 208/441 (47%), Gaps = 15/441 (3%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G++  A  ++  M  KG+  D   +  ++    K G  + ++ +   M++  ++  V  Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            A+   + + G +  A+  F++ML +GI P   TYN M+ GF    +   A R   DM  
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           R I+ DV+T+N +I+   +  K+ EAEKL  EM  + I P  ++Y +MI G+    R DD
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A  +FD M S    P+ VT+  ++   C A ++ E  ++LRE+  R +   + + +  L+
Sbjct: 420 AKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA-NTTTYNTLI 474

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C+  +LNAA D+ + MI   +  +     IL+  FC+ E  + A++L       E+I
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF------EVI 528

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
               S +D++  +YN +I  +C   +  +A   F  L   GV  D   +N +I G   + 
Sbjct: 529 --QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
               A  +   M   G   D   Y  LI   L+ GE   +   +  M  +G S  +   +
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646

Query: 489 SVMESLFEDGRVQTASRVMKS 509
            V + L  DGR+  +   M S
Sbjct: 647 MVAD-LITDGRLDKSFSDMLS 666



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 94/449 (20%), Positives = 186/449 (41%), Gaps = 38/449 (8%)

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G + FK +D+A   F  M       T +    +I  +V + R D A+ ++ +M+   + 
Sbjct: 79  SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N  ++  L+   CD  K+        ++ +    P D   F  LL   C    ++ A  
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQP-DVVTFNTLLHGLCLEDRISEALA 197

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +   M+      E G              +  A+ L D++V  EI L P         ++
Sbjct: 198 LFGYMV------ETG--------------FLEAVALFDQMV--EIGLTPV------VITF 229

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I  LC  G+  +A     +++ KG+ +D V +  ++ G  K G+  SA  ++  M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
             +  D   Y  +I+   + G  +DA+     M+E G +P    +  +++     GR   
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A R+++ M+E+ +  ++     ++ A +  G + EA    D M+     P+   ++S++ 
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
              +  +   A  + D         D+ ++  ++D    A +      +L +I  +G V 
Sbjct: 410 GFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 620 DWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           +  + + LI G  +  N   A D+   MI
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 242/516 (46%), Gaps = 18/516 (3%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A+  FR +    + +H+      +++ L   G+L  A C   D  +     D   +  
Sbjct: 241 DEAIALFRELPDKNVCSHN-----ILLKALLSAGRLKDA-CQHFD--EMSSPPDVVTYGT 292

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++  Y  +G ++ +VK+ D M   G+E +   Y ++  L+  +G+   A R    M   G
Sbjct: 293 MVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHG 352

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +      +  ++ GF     L  A R FE+M+ RG++ D VT+  +ING  R  ++ EA+
Sbjct: 353 VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEAD 412

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           ++  EM +K ++  V++YT +I GY       +A R+ +EM    V PN VTYTAL  GL
Sbjct: 413 RVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGL 472

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  G +    ++L EM  + +   +   +  L+   CK G+L  A  ++  M      T+
Sbjct: 473 CKQGDVRAANELLHEMCNKGL-ELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTD 531

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI+  CK+  +DRA  +L ++++K I  +P        ++YN ++   C +G+ 
Sbjct: 532 VYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGI--KPS------IATYNVLMNGFCMSGRV 583

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
              +     +++K V  + V +N+L++ +  + N  S  EI K M  + V  + + Y  L
Sbjct: 584 EGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNIL 643

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+ + +     +A      MIE G    +S + +++  L +  +   A      M  +G+
Sbjct: 644 IKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGL 703

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
               D+ +  ++      ++E  +   D ++++  V
Sbjct: 704 TAEPDVYSFYMDISFNEDNLESTITLCDELVEASHV 739



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 225/491 (45%), Gaps = 14/491 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           HN++   L  A   + A Q F  +        D  T+  M+      G+L +A  +L +M
Sbjct: 258 HNILLKALLSAGRLKDACQHFDEMSSPP----DVVTYGTMVHGYCVRGELENAVKLLDEM 313

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG++ +  ++  +I     KG V +++++ + M   GV      +  +      +G  
Sbjct: 314 AAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDL 373

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+R F +M   G+   R T+  ++ G   + +L+ A R  ++M  +G+ +DVVTY  +
Sbjct: 374 AAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVL 433

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+GY +   M EA ++  EM  + + P V++YT +  G         A  +  EM +  +
Sbjct: 434 IDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGL 493

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           + N  TY +L+ GLC  G + +  +++ EM E      D   +  L+   CKSG  + A 
Sbjct: 494 ELNVYTYNSLINGLCKFGNLEQAMRIMTEM-EAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++L+ M+   I      Y +L+  FC +   +   KLL+ ++EK +  RP         +
Sbjct: 553 NMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNV--RPNVV------T 604

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN +++  C +         ++ +  + V  +   +N LI+GH K  N   A    + M 
Sbjct: 605 YNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMI 664

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            +G+   A +Y  LI    +K + ++A+   D M  +G +    ++   M+  F +  ++
Sbjct: 665 EKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLE 724

Query: 502 TASRVMKSMVE 512
           +   +   +VE
Sbjct: 725 STITLCDELVE 735



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 128/584 (21%), Positives = 240/584 (41%), Gaps = 94/584 (16%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           K    D   F++L+       +   S ++   ++Q G+  S +S +A    +L R     
Sbjct: 194 KAFSSDPASFDLLL-------LCLPSAELLRRLRQYGLSPSPESCNA----VLSRLPLDE 242

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   F ++  + +     ++N++L     + +L+ A + F++M S     DVVTY TM++
Sbjct: 243 AIALFRELPDKNV----CSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGTMVH 295

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           GY    +++ A KL  EM  K +E     YT++I       +  DALR+ ++M    V  
Sbjct: 296 GYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVAL 355

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           +AV +T ++ G C  G +   +++  EM +R +   D      L+   C++G L  A  V
Sbjct: 356 DAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLA-ADRVTHTALINGLCRAGELKEADRV 414

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L+ M+   +  +   Y +LI+ +CK      A ++ +++V + +             +Y 
Sbjct: 415 LQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVA--------PNVVTYT 466

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +   LC  G    A     ++  KG+ L+   +N+LI G  K GN + A  I+  M   
Sbjct: 467 ALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAA 526

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   D   Y  LI++                                   L + G    A
Sbjct: 527 GHRTDVYTYTTLIDT-----------------------------------LCKSGEFDRA 551

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
             +++ M++KG+K ++     ++    M G VE     ++ M++    PN  +  S++ +
Sbjct: 552 HNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQ 611

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK------------ 611
                       +C+ ++       Y+ +    +A  +  N Y+IL K            
Sbjct: 612 ------------YCIDKNMKSTTEIYKGMHSQEVAPNE--NTYNILIKGHCKARNMKEAL 657

Query: 612 -----IMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
                ++EKG      S   LI  LN++    +A +    +R E
Sbjct: 658 YFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNE 701


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 228/494 (46%), Gaps = 15/494 (3%)

Query: 25  LVYN-VLHGAKNSEH---ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN +LHG  +SE    A+ F + +   G+   D  T+  +++ L + G+   AR I  
Sbjct: 267 MTYNSILHGYCSSEQPKEAIGFLKKMRSDGV-EPDVVTYNSLMDYLCKNGRSTEARKIFD 325

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M K+G++ D   +  L++ Y  KG + E   + D+M + G+      ++ L     ++ 
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A   F+KM   G+ P   TY  ++     S  ++ A+ +FE M   G++ +++ Y 
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 445

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++I+    F K D+AE+L  EM ++ I    I + ++I  +    R  ++ ++FD M   
Sbjct: 446 SLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            VKPN +TY+ L+ G C AGKM E  K+L  M    + P D   +  L+   C+   ++ 
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP-DCVTYNTLINGYCRVSRMDD 564

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  + K M+   +      Y I+++          A +L   +         +S   +E 
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT--------KSGTQLEL 616

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           S+YN ++  LC N  T +A   F+ L    + L+   FN +I    K G  D A ++   
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 676

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +   G+  D   Y  + E+ + +G   +      SM E+G +  S +  S++  L + G 
Sbjct: 677 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 736

Query: 500 VQTASRVMKSMVEK 513
           +  A   +  + EK
Sbjct: 737 ITRAGTYLSMIDEK 750



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 218/459 (47%), Gaps = 12/459 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L     S  A + F  + + GL   D  T+  +++     G L     +L  M
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGL-EPDIATYCTLLQGYATKGALVEMHALLDLM 362

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G+  D  +F +LI +Y K+  V E++ +F  M+Q G+  +V +Y A+  ++ + G  
Sbjct: 363 VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A  YF +M+ EG+ P    Y  ++    +  K + A     +M  RGI L+ + +N++
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+ + +  ++ E+EKLF  M    ++P VI+Y+T+I GY    + D+A ++   M S  +
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           KP+ VTY  L+ G C   +M +   + +EMV   + P   +  + L G+   +    AA 
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF-HTRRTAAAK 601

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++   + +     E   Y I++   CK  + D A+++   L   +        L +E  +
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--------LQLETRT 653

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMG 441
           +N MI  L   G+  +A+  F  L   G++  V  ++ +     ++G  +   ++   M 
Sbjct: 654 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 713

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
             G   ++     ++   L++G+   A T L SMI++ H
Sbjct: 714 ENGCTANSRMLNSIVRKLLQRGDITRAGTYL-SMIDEKH 751



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 154/666 (23%), Positives = 280/666 (42%), Gaps = 70/666 (10%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           AG       T+  +I    R G+L+     L ++ KKG + +   F  L++         
Sbjct: 80  AGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTS 139

Query: 109 ESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE---GIEPTRHTY 164
           +++ I    M +L     V S   L K +    R   A    + M  +   G  P   +Y
Sbjct: 140 DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY 199

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
             ++ GFF     + A   + +M  R IS DVVTY+++I    + + MD+A ++   M +
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVK 259

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
             + P  ++Y +++ GY + E+  +A+    +M+S  V+P+ VTY +L+  LC  G+  E
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +K+   M +R + P D + +  LL      G L     +L  M+R  I  +   + ILI
Sbjct: 320 ARKIFDSMTKRGLEP-DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             + K E  D A+ +  K+         Q  L+    +Y  +I  LC +G    A ++F 
Sbjct: 379 CAYAKQEKVDEAMLVFSKM--------RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFE 430

Query: 405 QLMKKGV------------------------------------LDPVAFNNLIRGHSKEG 428
           Q++ +G+                                    L+ + FN++I  H KEG
Sbjct: 431 QMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEG 490

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
               + ++  +M R GV  +   Y  LI+ Y   G+  +A   L SM   G  P    + 
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           +++       R+  A  + K MV  GV  N+     IL+ L        A      + +S
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS 610

Query: 549 GS---VPNFDSLLSVLSEKGKTIAAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
           G+   +  ++ +L  L +   T  A+++  + CL  D  ++  ++  ++ ALL  G+   
Sbjct: 611 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL-TDLQLETRTFNIMIGALLKVGRNDE 669

Query: 605 AYSILFKIMEKGGVTDWKS----SDKLI------------AGLNQEGNTKQADILSRMIR 648
           A  +   +   G V D ++    ++ LI              + + G T  + +L+ ++R
Sbjct: 670 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 729

Query: 649 GEMSRG 654
             + RG
Sbjct: 730 KLLQRG 735



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 229/515 (44%), Gaps = 35/515 (6%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L +   ++ A  +L  M K GV  +   +  ++  Y      +E++   
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL 289

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  GVE  V +Y++L   + + GR   A++ F+ M   G+EP   TY  +L G+   
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L       + M   GI  D   +N +I  Y + +K+DEA  +F++M++  + P V++Y
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I         DDA+  F++M    + PN + YT+L+  LC   K  + ++++ EM++
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLD 469

Query: 295 RYIPPKDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           R I    N++F   ++   CK G +  +  +   M+R+ +      Y  LI+ +C A   
Sbjct: 470 RGICL--NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 354 DRAIKLLDKLVEKEIILRPQSTL----------------------DMEAS-------SYN 384
           D A KLL  +    + ++P                          +M +S       +YN
Sbjct: 528 DEATKLLSSMFS--VGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            ++Q L H  +T  A+  +  + K G  L+   +N ++ G  K    D A  + + +   
Sbjct: 586 IILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 645

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
            +  +   +  +I + L+ G   +AK    ++  +G  P    +  + E+L E G ++  
Sbjct: 646 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 705

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
             +  SM E G   N  ++  I+  LL RG +  A
Sbjct: 706 DDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 126/569 (22%), Positives = 244/569 (42%), Gaps = 19/569 (3%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G   D   +  +I  + K+G   ++   +  M    +   V +Y ++   + +      A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
                 M+  G+ P   TYN +L G+  S + + AI F + M+S G+  DVVTYN++++ 
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +  +  EA K+F  M ++ +EP + +Y T+++GY       +   + D M    + P+
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
              +  L+       K+ E   V  +M +  + P +   +  ++G+ CKSG ++ A    
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP-NVVTYGAVIGILCKSGSVDDAMLYF 429

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
           + MI   +      Y  LI + C  + +D+A +L+ +++++ I L            +N 
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL--------NTIFFNS 481

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I   C  G+  ++E  F  +++ GV  + + ++ LI G+   G  D A +++  M   G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +  D   Y  LI  Y R     DA      M+  G SP    +  +++ LF   R   A 
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL------GRIDLMMQSGSVPNFDSLL 558
            +   + + G +  L     IL  L      +EAL         DL +++ +   F+ ++
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT---FNIMI 658

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
             L + G+   A  L         + D+ +Y  + + L+  G       +   + E G  
Sbjct: 659 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 718

Query: 619 TDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            + +  + ++  L Q G+  +A     MI
Sbjct: 719 ANSRMLNSIVRKLLQRGDITRAGTYLSMI 747



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/538 (21%), Positives = 243/538 (45%), Gaps = 29/538 (5%)

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTY 164
           +++  +F+ + + G   S+   +     + R        RY N+M   G   + PT HTY
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTY 90

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA-EKLFAEMK 223
            +++     + +L+       ++  +G  ++ +T+  ++ G    K+  +A + +   M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEM---KSFDVKPNAVTYTALLPGLCDAG 280
           E +  P V S T ++KG     R+ +AL +   M   +     P+ V+YT ++ G    G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
              +      EM++R I P D   +  ++   CK   ++ A +VL  M++  +      Y
Sbjct: 211 DSDKAYSTYHEMLDRRISP-DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 341 GILIENFCKAEMYDRAIKLLDKL----VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
             ++  +C +E    AI  L K+    VE +++            +YN ++ +LC NG++
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVV------------TYNSLMDYLCKNGRS 317

Query: 397 GKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A   F  + K+G+   +A +  L++G++ +G       ++ +M R G+  D   +  L
Sbjct: 318 TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL 377

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I +Y ++ +  +A      M + G +P    + +V+  L + G V  A    + M+++G+
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             N+ +   ++ +L +    ++A   I  M+  G   N   F+S++    ++G+ I + K
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           L D  +      ++ +Y  ++D    AGK   A  +L  +   G   D  + + LI G
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLING 555


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 212/440 (48%), Gaps = 16/440 (3%)

Query: 79  LLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           LLD M + G+  D  +F +LI +Y K+G V +++ +F  M+Q G+  +  +Y A+  ++ 
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A  YF +M+ EG+ P    YN ++ G     K E A     +M  RGI L+ +
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +N++I+ + +  ++ E+EKLF  M    ++P VI+Y T+I GY    + D+A+++   M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  +KPN VTY+ L+ G C   +M +   + +EM    + P   +  + L G+  ++  
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF-QTRR 596

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             AA ++   +       E   Y I++   CK ++ D A+++   L   +        L 
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD--------LK 648

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
           +EA ++N MI  L   G+  +A+  F      G++ +   +  +      +G  +   ++
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G   D+     ++   L++GE   A T L SMI++ H    +   S+   L  
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLS 767

Query: 497 DGRVQTASRVM----KSMVE 512
            G+ Q   R +    KS +E
Sbjct: 768 GGKYQEYYRFLPEKYKSFIE 787



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 142/569 (24%), Positives = 265/569 (46%), Gaps = 21/569 (3%)

Query: 39  ALQFFRWVERAGL--FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           A+  +  + RAG      D  T+  +I    R G+L+     L ++ KKG + D   F  
Sbjct: 68  AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127

Query: 97  LIESYGKKGIVQESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           L++         +++ I    M +LG   +V SY+ L K +    R   A    + M  +
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187

Query: 156 ---GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
              G  P   +Y  ++ GFF     + A   + +M  RGI  DVVTYN++I    + + M
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D+A ++   M +  + P  ++Y +++ GY +  +  +A+    +M+S  V+P+ VTY+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  G+ +E +K+   M +R + P+  +    L G   K G L     +L  M+R  
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK-GALVEMHGLLDLMVRNG 366

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I  +   + ILI  + K    D+A+ +  K+         Q  L+  A +Y  +I  LC 
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKM--------RQQGLNPNAVTYGAVIGILCK 418

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           +G+   A ++F Q++ +G L P  + +N+LI G       + A E++  M  RG+  +  
Sbjct: 419 SGRVEDAMLYFEQMIDEG-LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +  +I+S+ ++G   +++   + M+  G  P    + +++      G++  A +++  M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
           V  G+K N    + ++        +E+AL     M  SG  P+   ++ +L  L +  +T
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
            AA +L          I+L++Y  +L  L
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGL 626



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/515 (23%), Positives = 236/515 (45%), Gaps = 35/515 (6%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L +   ++ A  +L  M K GV  D   +  ++  Y   G  +E++   
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  GVE  V +Y  L   + + GR M A++ F+ M   G++P   TY  +L G+   
Sbjct: 290 KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK 349

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L       + M   GI  D   ++ +I  Y +  K+D+A  +F++M+++ + P  ++Y
Sbjct: 350 GALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTY 409

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I       R +DA+  F++M    + P  + Y +L+ GLC   K    ++++ EM++
Sbjct: 410 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 469

Query: 295 RYIPPKDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           R I    N++F   ++   CK G +  +  + + M+R+ +      Y  LI  +C A   
Sbjct: 470 RGICL--NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527

Query: 354 DRAIKLLDKLVEKEIILRPQ----STL------------------DMEAS-------SYN 384
           D A+KLL  +V   + L+P     STL                  +ME+S       +YN
Sbjct: 528 DEAMKLLSGMV--SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            ++Q L    +T  A+  + ++ + G  ++   +N ++ G  K    D A ++ + +   
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
            +  +A  +  +I++ L+ G   +AK    +   +G  P    +R + E++   G ++  
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 705

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            ++  SM + G   +  ++  I+  LL RG +  A
Sbjct: 706 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 226/494 (45%), Gaps = 15/494 (3%)

Query: 25  LVYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN +LHG  +S   + A+ F + +   G+   D  T+  +++ L + G+   AR I  
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGV-EPDVVTYSLLMDYLCKNGRCMEARKIFD 325

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M K+G++ +   +  L++ Y  KG + E   + D+M + G+      +  L     ++G
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQG 385

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A   F+KM  +G+ P   TY  ++     S ++E A+ +FE M   G+S   + YN
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++I+G     K + AE+L  EM ++ I    I + ++I  +    R  ++ ++F+ M   
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            VKPN +TY  L+ G C AGKM E  K+L  MV   + P +   +  L+   CK   +  
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP-NTVTYSTLINGYCKISRMED 564

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  + K M    +  +   Y I+++   +      A +L  ++ E        S   +E 
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE--------SGTQIEL 616

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           S+YN ++  LC N  T  A   F+ L    + L+   FN +I    K G  D A ++   
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
               G+  +   Y  + E+ + +G   +      SM ++G +  S +   ++  L + G 
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 500 VQTASRVMKSMVEK 513
           +  A   +  + EK
Sbjct: 737 ITRAGTYLSMIDEK 750



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 209/465 (44%), Gaps = 18/465 (3%)

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           ++ D+ TY  +I    R  ++D        + +K      I++T ++KG  A +R  DA+
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 252 RI-FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY--IPPKDNSVFMKL 308
            I    M      PN  +Y  LL GLCD  +  E  ++L  M +      P D   +  +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +    K G  + A      M+   I  +   Y  +I   CKA+  D+A+++L+ +V+  +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           +  P      +  +YN ++   C +GQ  +A  F +++   GV  D V ++ L+    K 
Sbjct: 263 M--P------DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G    A +I   M +RG+  +   Y  L++ Y  KG   +    LD M+ +G  P   +F
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++ +  + G+V  A  V   M ++G+  N      ++  L   G VE+A+   + M+ 
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  P    ++SL+  L    K   A +L+   L R   ++   +  ++D+    G+ + 
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494

Query: 605 AYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           +   LF++M + GV  +  + + LI G    G   +A  +LS M+
Sbjct: 495 SEK-LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 175/396 (44%), Gaps = 13/396 (3%)

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           +V P+  TY  L+   C AG++      L  ++++     D   F  LL   C     + 
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSD 140

Query: 321 AAD-VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           A D VL+ M  L        Y IL++  C       A++LL  + +      P   +   
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVV--- 197

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             SY  +I      G + KA   + +++ +G+L D V +N++I    K    D A E++ 
Sbjct: 198 --SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M + GV  D   Y  ++  Y   G+P +A   L  M  DG  P    +  +M+ L ++G
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           R   A ++  SM ++G+K  +     +L+    +G + E  G +DLM+++G  P+   F 
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            L+   +++GK   A+ +      +    +  +Y  V+  L  +G+  +A     +++++
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQAD--ILSRMIRG 649
           G        + LI GL      ++A+  IL  + RG
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471


>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 517

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/527 (22%), Positives = 236/527 (44%), Gaps = 41/527 (7%)

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           K G++  +V++FD M+          Y+    ++++  R+ +A+  +  M+  G      
Sbjct: 21  KSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPF 80

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           TY+  + G     K E       DM++ G   D+  +N  ++   R  K+  A + F  M
Sbjct: 81  TYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCM 140

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
            ++  EP V+SYT +I G     +  DA+ I++ M    V P+     AL+ GLC A K+
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
               +++ E ++         V+  L+   CK+G +  A  +   M ++    +   Y +
Sbjct: 201 DLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNV 260

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           L+  +    M  RA  ++ ++V        +S + ++A SYN +++  C      +   F
Sbjct: 261 LLNYYYDNNMLKRAEGVMTEMV--------RSGIQLDAYSYNQLLKRHCRVSHPDRCYSF 312

Query: 403 -FRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
             +++  +G  D V+++ LI    +  N   A+++ + M ++G+  +   +  LI+++LR
Sbjct: 313 MLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLR 372

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
           +G  + AK  LD M E G SP    + ++++ L + G V  A  +   M+E  +  +   
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPD--- 429

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
                                          +++SL+S L   G+   A+KL +   G++
Sbjct: 430 -----------------------------AISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
           C  D  +++ ++  L+   K   AY +  ++M+KG   D   SD LI
Sbjct: 461 CCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 132/272 (48%), Gaps = 9/272 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I    + G++  A  +   M K G + D   + VL+  Y    +++ +  +   M + G
Sbjct: 226 LISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSG 285

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH----TYNVMLWGFFLSLKL 177
           ++    SY+ L K   R  R     R ++ ML E +EP       +Y+ ++  F  +   
Sbjct: 286 IQLDAYSYNQLLK---RHCRVSHPDRCYSFMLKE-MEPRGFCDVVSYSTLIETFCRASNT 341

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A + FE+M+ +GI  +VVT+ ++I  + R      A+KL  +M E  + P  I YTT+
Sbjct: 342 KKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +         D A  IF++M   ++ P+A++Y +L+ GLC +G++ E  K+  +M  +  
Sbjct: 402 LDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
            P D   F  ++G   +   L+AA  V   M+
Sbjct: 462 CP-DELTFKFIIGGLIREKKLSAAYKVWDQMM 492



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 134/279 (48%), Gaps = 3/279 (1%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++  LI  + K G ++++  +   M ++G E  + +Y+ L            A+    +M
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEM 281

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRF-FEDMKSRGISLDVVTYNTMINGYNRFKK 211
           +  GI+   ++YN +L         +    F  ++M+ RG   DVV+Y+T+I  + R   
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFC-DVVSYSTLIETFCRASN 340

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
             +A KLF EM++K I   V+++T++IK ++    +  A ++ D+M    + P+ + YT 
Sbjct: 341 TKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           +L  LC +G + +   +  +M+E  I P D   +  L+   C+SG +  A  + + M   
Sbjct: 401 ILDHLCKSGNVDKAYGIFNDMIEHEITP-DAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
               +   +  +I    + +    A K+ D++++K   L
Sbjct: 460 ECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTL 498



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 83/171 (48%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  ++  +IE   R      A  +  +M +KG+  +   F  LI+++ ++G    + K+ 
Sbjct: 324 DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLL 383

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M +LG+      Y  +   + + G    A   FN M+   I P   +YN ++ G   S
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRS 443

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
            ++  AI+ FEDMK +    D +T+  +I G  R KK+  A K++ +M +K
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDK 494



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           A N++ A + F  + + G+   +  T   +I+   R G  + A+ +L  M + G+  D  
Sbjct: 338 ASNTKKAYKLFEEMRQKGIVT-NVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            +  +++   K G V ++  IF+ M +  +     SY++L   + R GR   A + F  M
Sbjct: 397 FYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
             +   P   T+  ++ G     KL  A + ++ M  +G +LD    +T+I  
Sbjct: 457 KGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 133/558 (23%), Positives = 245/558 (43%), Gaps = 22/558 (3%)

Query: 83  PKKGVQWD----EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           P  G+Q D      +  VL+E  G K  + ESV  +  M   G++  V +++ L K + R
Sbjct: 138 PLFGIQADTVVYNHLLNVLVE--GSKMKLLESV--YSEMGARGIKPDVVTFNTLMKALCR 193

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             +   A     +M S G+ P   T+  ++ GF     +E A+R    M   G S   VT
Sbjct: 194 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
            N +INGY +  ++++A     +      EP  I+Y T + G    +    AL++ D M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
                P+  TY  ++  LC  G++ E + +L +MV+R   P D + F  L+   C    L
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRL 372

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A D+ + +    +  +   + ILI   CK      A++L +++          S    
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM--------KNSGCTP 424

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
           +  +YN +I +LC  G+ GKA    + +   G     + +N +I G  K+   + A E+ 
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M  +G+ R+A  +  LI+   +  +  DA   ++ MI +G  P +  + S++    + 
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQ 544

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G ++ A+ ++++M   G + ++     ++  L   G  + AL  +  M   G  P    +
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL-NAYSILFKIM 613
           + +L  L  +     A+ L           D  +Y+ V   L   G  +  A+  + +++
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664

Query: 614 EKGGVTDWKSSDKLIAGL 631
           +KG + ++ S   L  GL
Sbjct: 665 DKGFIPEFSSFRMLAEGL 682



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 228/507 (44%), Gaps = 15/507 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +++ L R  ++  A  +L +M  +GV  DE  F  L++ + ++G ++ ++++ 
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M ++G   +  + + L     + GR   A  Y  + +++G EP + TYN  + G   +
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A++  + M   G   DV TYN ++N   +  +++EA+ +  +M ++   P + ++
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I       R ++AL +  ++    V P+  T+  L+  LC  G      ++  EM  
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P D   +  L+   C  G L  A D+LK M     P     Y  +I+  CK    +
Sbjct: 420 SGCTP-DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A ++ D++  + I           A ++N +I  LC + +   A     Q++ +G L P
Sbjct: 479 EAEEVFDQMDLQGI--------SRNAITFNTLIDGLCKDKKIDDAFGLINQMISEG-LQP 529

Query: 415 --VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             + +N+++  + K+G+   A +I++ M   G   D   Y  LI    + G    A   L
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M   G  P    +  V++SLF    ++ A  + + M E G   +  L  KI+   L R
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA-LTYKIVFRGLCR 648

Query: 533 --GHVEEALGRIDLMMQSGSVPNFDSL 557
             G ++EA   +  M+  G +P F S 
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPEFSSF 675



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 136/582 (23%), Positives = 258/582 (44%), Gaps = 28/582 (4%)

Query: 51  LFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQES 110
           ++NH       ++ +L    K+     +  +M  +G++ D   F  L+++  +   V+ +
Sbjct: 148 VYNH-------LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           V + + M   GV     ++  L +  +  G    A R   +ML  G   T+ T NV++ G
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           +    ++E A+ + +   + G   D +TYNT +NG  +   +  A K+   M ++  +P 
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V +Y  ++       + ++A  I ++M      P+  T+  L+  LC   ++ E   + R
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           ++  + + P D   F  L+   CK G  + A  + + M       +   Y  LI+N C  
Sbjct: 381 QVTVKGVSP-DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
               +A+ LL  +   E    P+ST+     +YN +I  LC   +  +AE  F Q+  +G
Sbjct: 440 GKLGKALDLLKDM---ESTGCPRSTI-----TYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 411 V-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           +  + + FN LI G  K+   D AF ++  M   G+  +   Y  ++  Y ++G+   A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
             L++M  +G       + +++  L + GR Q A +V++ M  KG++        +L++L
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL---GRDCI 583
             R ++ +AL     M + G  P+   +  +   L   G  I   +  DF L    +  I
Sbjct: 612 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK--EAFDFMLEMVDKGFI 669

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
            + +S+  + + LL  G        +  IMEK    D + SD
Sbjct: 670 PEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK---VDLRESD 708



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 198/429 (46%), Gaps = 12/429 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL + +  E A  F  D+ T+   +  L +   + HA  ++  M ++G   D   + +
Sbjct: 268 EDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++    K G ++E+  I + M   G    + +++ L   +    R   A     ++  +G
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P  +T+N+++           A+R FE+MK+ G + D VTYNT+I+      K+ +A 
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L  +M+      + I+Y T+I G     R ++A  +FD+M    +  NA+T+  L+ GL
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   K+ +   ++ +M+   + P +N  +  +L   CK G +  AAD+L+ M       +
Sbjct: 507 CKDKKIDDAFGLINQMISEGLQP-NNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              YG LI   CKA     A+K+L  +  K   +RP         +YNP++Q L      
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKG--MRPTP------KAYNPVLQSLFRRNNI 617

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP-DSAFEIVKIMGRRGVPRDADAYIC 454
             A   FR++ + G   D + +  + RG  + G P   AF+ +  M  +G   +  ++  
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677

Query: 455 LIESYLRKG 463
           L E  L  G
Sbjct: 678 LAEGLLNLG 686



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 3/306 (0%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A     Q  ++ + P  +  N++ N L    +   AL+ F  ++ +G    D  T+  
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC-TPDEVTYNT 431

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L  +GKL  A  +L DM   G       +  +I+   KK  ++E+ ++FD M   G
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           + R+  +++ L   + +  +   A    N+M+SEG++P   TYN +L  +     ++ A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              E M + G  +DVVTY T+ING  +  +   A K+   M+ K + PT  +Y  +++  
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVERYIPPK 300
                  DAL +F EM      P+A+TY  +  GLC  G  + E    + EMV++   P+
Sbjct: 612 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671

Query: 301 DNSVFM 306
            +S  M
Sbjct: 672 FSSFRM 677


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 217/461 (47%), Gaps = 10/461 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F ++I+   K+G + E+  +F  MK +G    V +Y++L     + G     ++  ++M 
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMR 262

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G      TYN ++  F    ++E A  +F +MK +G+  +VVT++T ++ + +   + 
Sbjct: 263 KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQ 322

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA KLFA+M+ + + P   +YT+++ G     R DDA+ + DEM    + PN VTYT ++
Sbjct: 323 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 382

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC  GK+ E   VL  ++ER     +  ++  L+     + +   A D+L  M    +
Sbjct: 383 DGLCKEGKVAEADNVL-SLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGM 441

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   YG LI   CK +  D A  LL K+      LRP + +      Y  ++  L   
Sbjct: 442 ELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCG--LRPNTVI------YTTIMDALFKA 493

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+  +A     +++  G   + V +  LI G  K G+   A      M   G+  +  AY
Sbjct: 494 GKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAY 553

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI+ + + G    A   ++ MI+ G S    ++ S+++   +   +Q A  +   M+E
Sbjct: 554 TALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIE 613

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            G++ +L      +        ++EA G +  M+ +G  P+
Sbjct: 614 SGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPD 654



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 226/495 (45%), Gaps = 12/495 (2%)

Query: 18  VPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           VP  F  N+V + L        A   F  ++  G  + D  T+  +I+  G+ G L    
Sbjct: 197 VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGC-SPDVVTYNSLIDGYGKCGDLEEVE 255

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            ++ +M K G   D   +  LI  + K G ++++   F  MK+ GV  +V ++       
Sbjct: 256 QLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAF 315

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            + G    A + F +M   G+ P   TY  ++ G   + +L+ AI   ++M  +G+  +V
Sbjct: 316 CKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VTY  M++G  +  K+ EA+ + + M+   ++   + YTT+I G+     ++ AL + ++
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ 435

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           MK+  ++ +   Y  L+ GLC   K+ E + +L +M    + P +  ++  ++    K+G
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRP-NTVIYTTIMDALFKAG 494

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
             + A  +L  ++          Y  LI+  CKA     AI   +K+  +E+ L P    
Sbjct: 495 KESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM--RELGLDPN--- 549

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                +Y  +I   C  G   KA     +++ KG+ LD V + +LI G+ K+ N   AF 
Sbjct: 550 ---VQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFA 606

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   M   G+  D   Y C I  +       +A+  L  MI  G +P  +++  ++    
Sbjct: 607 LKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQ 666

Query: 496 EDGRVQTASRVMKSM 510
           + G ++ AS +   M
Sbjct: 667 KLGNMEEASSLQNEM 681



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 141/653 (21%), Positives = 278/653 (42%), Gaps = 74/653 (11%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           R+   + A+ P  DH L     H   +S H         RA LF H R    +++  L  
Sbjct: 55  RVLRSLHAVAP--DHLLS----HPLPSSAHVCLAAHLAARARLFAHSR----RLLSRLLG 104

Query: 69  VGKLNHARCILLDM---------PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
            G   H    L+D+         P++       + + L+      G++ ++V+    ++Q
Sbjct: 105 AGHRPHLAASLVDLLHRAALALGPRRSAL--PSVVDTLLSLLADHGLLDDAVRALARVRQ 162

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           L V  + ++ + +   + R  +  + +R F+ +      P   T+N+++       +L  
Sbjct: 163 LRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV----PNVFTFNIVIDFLCKEGELVE 218

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A   F  MK+ G S DVVTYN++I+GY +   ++E E+L +EM++      V++Y  +I 
Sbjct: 219 ARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALIN 278

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
            +    R + A   F EMK   V  N VT++  +   C  G + E  K+  +M  R + P
Sbjct: 279 CFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMP 338

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            + + +  L+   CK+G L+ A  +L  M+   +      Y ++++  CK          
Sbjct: 339 NEFT-YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCK---------- 387

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
                                             G+  +A+     + + GV  + + + 
Sbjct: 388 ---------------------------------EGKVAEADNVLSLMERGGVKANELLYT 414

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            LI GH    N + A +++  M  +G+  D   Y  LI    +  +  +AK+ L  M   
Sbjct: 415 TLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGC 474

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P + ++ ++M++LF+ G+   A  ++  +++ G + N+     +++ L   G + EA
Sbjct: 475 GLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEA 534

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           +   + M + G  PN   + +L+    + G    A+ L++  + +   +D   Y  ++D 
Sbjct: 535 ISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDG 594

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            +      +A+++  K++E G   D       I+G       ++A  +LS MI
Sbjct: 595 YMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 647



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 96/201 (47%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +++ L + GK + A  +L  +   G Q +   +  LI+   K G + E++  F+ M+
Sbjct: 483 YTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMR 542

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           +LG++ +V++Y AL     + G    A    N+M+ +G+   +  Y  ++ G+     L+
Sbjct: 543 ELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQ 602

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A      M   G+ LD+  Y   I+G+     M EA  + +EM    I P    Y  +I
Sbjct: 603 DAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662

Query: 239 KGYVAVERADDALRIFDEMKS 259
           + Y  +   ++A  + +EM+S
Sbjct: 663 RKYQKLGNMEEASSLQNEMES 683


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 228/496 (45%), Gaps = 47/496 (9%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L R G++  A  +L  M + G+Q  +  +  +++   K G   ++V   D++
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIG---DTVSALDLL 242

Query: 118 KQL----GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           +++     +  +V  Y A+   + + GR+  A+  F +M  +GI P   TYN M+ GF  
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           S +   A +  ++M  R IS DVVTYN +IN + +  K  EAE+L+ EM  + I P  I+
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y++MI G+    R D A  +F  M +    PN +T+  L+ G C A ++ +  ++L EM 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           E  +   D + +  L+      G LNAA D+L+ MI   +  +      L++  C     
Sbjct: 423 ETGLV-ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 354 DRAIKLLDKLVEKEIIL---RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
             A+++   + + +  L    P + ++ +  +YN +I  L + G+  +AE  + ++  +G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 411 VL------------------------------------DPVAFNNLIRGHSKEGNPDSAF 434
           ++                                    + V F  LI G+ K G  D   
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           E+   MGRRG+  +A  YI LI  + + G    A      MI  G  P +   R+++  L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661

Query: 495 FEDGRVQTASRVMKSM 510
           +    ++ A  +++ +
Sbjct: 662 WSKEELKRAVAMLEKL 677



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/545 (21%), Positives = 249/545 (45%), Gaps = 25/545 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           +++++ +F  M +     SV  +  L  +++R  R  +    + KM  + I    +++ +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    KL  A+  F  +   G+  DVVT+NT+++G     ++ EA  LF +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             P V+++TT++ G     R  +A+ + D M    ++P  +TY  ++ G+C  G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 287 KVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            +LR+M E  +I P +  ++  ++   CK G  + A ++   M    I  +   Y  +I 
Sbjct: 240 DLLRKMEEISHIIP-NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
            FC +  +  A +LL +++E++I   P      +  +YN +I      G+  +AE  + +
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKI--SP------DVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           ++ +G++ + + ++++I G  K+   D+A  +  +M  +G   +   +  LI+ Y     
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             D    L  M E G    ++ + +++   +  G +  A  +++ M+  G+  ++     
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 525 ILEALLMRGHVEEALGRIDLMMQS--------------GSVPNFDSLLSVLSEKGKTIAA 570
           +L+ L   G +++AL    +M +S                V  ++ L+S L  +GK + A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            +L +    R  + D  +Y  ++D L    +   A  +   +  K    +  +   LI G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 631 LNQEG 635
             + G
Sbjct: 591 YCKAG 595



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 224/489 (45%), Gaps = 27/489 (5%)

Query: 170 GFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
           GF     LE AI  F DM +SR +   VV +  ++    R ++ D    L+ +M+ K I 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLP-SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
             + S+T +IK + +  +   AL  F ++    + P+ VT+  LL GLC   ++ E   +
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             +M E    P +   F  L+   C+ G +  A  +L  M+   +      YG +++  C
Sbjct: 172 FHQMFETTCRP-NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A+ LL K+ E   I+ P   +      Y+ +I  LC +G+   A+  F ++ +
Sbjct: 231 KIGDTVSALDLLRKMEEISHII-PNVVI------YSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           KG+  D   +N++I G    G    A ++++ M  R +  D   Y  LI +++++G+  +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+   D M+  G  P +  + S+++   +  R+  A  +   M  KG   NL     +++
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                  +++ +  +  M ++G V +   +++L+      G   AA+ LL   +      
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEK------------GGVTDWKSSDKLIAGLN 632
           D+ + + +LD L   GK  +A   +FK+M+K            G   D ++ + LI+GL 
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 633 QEGNTKQAD 641
            EG   +A+
Sbjct: 523 NEGKFLEAE 531



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/520 (22%), Positives = 216/520 (41%), Gaps = 57/520 (10%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M +K ++ D   F +LI+ +     +  ++  F  + +LG+   V +++ L   +    R
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F++M      P   T+  ++ G     ++  A+   + M   G+    +TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 202 MINGYNR----------FKKMDE--------------------------AEKLFAEMKEK 225
           +++G  +           +KM+E                          A+ LF EM+EK
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I P + +Y +MI G+ +  R  DA ++  EM    + P+ VTY AL+      GK  E 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           +++  EM+ R I P +   +  ++   CK   L+AA  +   M           +  LI+
Sbjct: 345 EELYDEMLPRGIIP-NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
            +C A+  D  ++LL ++ E  ++         + ++YN +I      G    A    ++
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLV--------ADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-----------RGVPRDADAYI 453
           ++  G+  D V  + L+ G    G    A E+ K+M +            GV  D   Y 
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI   + +G+  +A+   + M   G  P +  + S+++ L +  R+  A+++  SM  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
               N+     ++      G V++ L     M + G V N
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 25/291 (8%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + +   GAK  +  ++    +   GL   D  T+  +I     VG LN A  +L +M 
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLV-ADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
             G+  D    + L++     G +++++++F +M     ++S K  DA            
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM-----QKSKKDLDA------------ 500

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
                FN     G+EP   TYN+++ G     K   A   +E+M  RGI  D +TY++MI
Sbjct: 501 --SHPFN-----GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G  +  ++DEA ++F  M  K+  P V+++TT+I GY    R DD L +F EM    + 
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            NA+TY  L+ G    G +     + +EM+   + P   ++   L G+  K
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 218/478 (45%), Gaps = 9/478 (1%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           KGV         L+ S  K   + +S ++FD M + GV   V +Y        + G+   
Sbjct: 200 KGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDE 259

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   F KM   G+ P   TYN ++ G   S +LE A+ F   M    ++  +VTY  ++N
Sbjct: 260 AVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVN 319

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G  +F+K DEA  +  EM  K   P    +  +I GY      DDALR+ D+M    +KP
Sbjct: 320 GLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKP 379

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           NAVT+  LL G C   +M + ++VL  ++   +   +++    +L + CKS   ++A  +
Sbjct: 380 NAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDAC-SYVLHLLCKSSKFDSALKI 438

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           +KA++  +I        +L+   CK   +  AI L  +L +K+        L    ++ N
Sbjct: 439 VKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKK-------GLAANTTTSN 491

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            ++  LC  G   +     ++++++G VLD +++N LI G  K G  + AF++ + M ++
Sbjct: 492 ALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQ 551

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   D   Y  L++    KG+  D    L    + G  P    +  ++E      R+  A
Sbjct: 552 GFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNA 611

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
             +   +V   V+ +  +   ++ A    G+  EA    D M  S   P   +  S++
Sbjct: 612 VSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSII 669



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 155/680 (22%), Positives = 286/680 (42%), Gaps = 63/680 (9%)

Query: 11  QNKIRALVP-----QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
            +K + L+P     +F+H+   +  H   N +  L FF +  +   F     ++  +I +
Sbjct: 63  SSKCKTLIPNLTPHEFEHSFFTH--HTTVNLKTTLDFFSFASKNFKFRFTVRSYCILIRL 120

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK---QLGV 122
           L     +  A+  L               + LIE      + +   ++ +I     +LG 
Sbjct: 121 LLASNHIPRAKFTL---------------KRLIEGNANTPLKKTDARLSEIASAFLELG- 164

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKML---SEGIEPTRHTYNVMLWGFFLSLKLET 179
           ERS    D L  ++  + +++     F+  +   S+G+ P+  + N ++     S +L  
Sbjct: 165 ERSHGELDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHK 224

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           + R F+ M   G+ +DV TY T IN Y +  K+DEA  LF +M E  + P V++Y  +I 
Sbjct: 225 SFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLID 284

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G     R ++AL     M    V P+ VTY  L+ GL    K  E   VL EM  +   P
Sbjct: 285 GLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSP 344

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            +  VF  L+    + G+++ A  V   M    +   A  +  L++ FC+    ++A ++
Sbjct: 345 NE-FVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQV 403

Query: 360 LDKLVEKEI------------ILRPQSTLD---------------MEASSYNPMIQHLCH 392
           L+ L+   +            +L   S  D               +  S    ++  LC 
Sbjct: 404 LEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCK 463

Query: 393 NGQTGKA-EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            G+  +A +++FR   KKG+  +    N L+ G  + GN +  F + K M  RG+  D  
Sbjct: 464 CGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGI 523

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           +Y  LI    + G+  +A    + M++ G  P +  +  +M+ L + G++    RV+   
Sbjct: 524 SYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEA 583

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKT 567
            + GV  N+   A +LE       ++ A+   + ++ +    S   ++ L++  S+ G  
Sbjct: 584 KDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNF 643

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A KL D     +    + +Y  ++  +        A  I  ++  +G + +      L
Sbjct: 644 TEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTAL 703

Query: 628 IAGLNQEGNTKQAD-ILSRM 646
           I G  + G   Q + IL  M
Sbjct: 704 IGGYCKLGQMDQIESILQEM 723



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 173/366 (47%), Gaps = 15/366 (4%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           LV  +    K+ E    +FR  ++ GL  +   ++  +  +  R G +     +  +M +
Sbjct: 457 LVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCER-GNMEEVFPVCKEMVE 515

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +G+  D   +  LI    K G ++E+ K+ + M + G +    +Y+ L K +  +G+   
Sbjct: 516 RGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDD 575

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
             R  ++    G+ P  +TY +ML G+  + +++ A+  F  +    + L  V YN +I 
Sbjct: 576 VGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIA 635

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            +++     EA KL   M+  NI PT+ +Y+++I G    +  ++A  IF+EM++  + P
Sbjct: 636 AHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMP 695

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N   YTAL+ G C  G+M +++ +L+EM    I P +   +  ++   CK G+   A  +
Sbjct: 696 NVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQP-NKITYTIMIDGYCKMGNTKEATKL 754

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L  MI   I  +   Y +L + +CK               E E  L+  + + +E  +Y 
Sbjct: 755 LNEMIANGISPDTVTYTVLQKGYCKEN-------------ELEETLQGDTAVPLEEITYT 801

Query: 385 PMIQHL 390
            ++  L
Sbjct: 802 TLVDKL 807



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 123/579 (21%), Positives = 261/579 (45%), Gaps = 26/579 (4%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + GV  D   +   I +Y K G + E+V +F  M + GV  +V +Y+ L   + + GR
Sbjct: 232 MCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGR 291

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A  +  +M+   + P+  TY +++ G     K + A     +M S+G S +   +N 
Sbjct: 292 LEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNA 351

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS-- 259
           +I+GY+R   MD+A ++  +M  K ++P  +++ T+++G+    + + A ++ + + S  
Sbjct: 352 LIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNV 411

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG-HL 318
             V  +A +Y   L  LC + K     K+++ ++ R I   D+ + + + G+ CK G HL
Sbjct: 412 LSVNEDACSYVLHL--LCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGL-CKCGKHL 468

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            A     +   +  +         L+   C+    +    +  ++VE+ ++L        
Sbjct: 469 EAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVL-------- 520

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
           +  SYN +I   C +G+  +A     ++MK+G   D   +N L++G + +G  D    ++
Sbjct: 521 DGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVL 580

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
                 GV  +   Y  ++E Y       +A +  + ++ +    +  ++  ++ +  + 
Sbjct: 581 HEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKA 640

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G    A ++  +M    +   +   + I+  +     VEEA G  + M   G +PN   +
Sbjct: 641 GNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCY 700

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCI-IDLASYEKVLDALLAAGKTLNAYSILFKIM 613
            +L+    + G+      +L   +  +CI  +  +Y  ++D     G T  A  +L +++
Sbjct: 701 TALIGGYCKLGQMDQIESILQE-MTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMI 759

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMS 652
             G      S D +   + Q+G  K+ + L   ++G+ +
Sbjct: 760 ANG-----ISPDTVTYTVLQKGYCKENE-LEETLQGDTA 792


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 137/591 (23%), Positives = 261/591 (44%), Gaps = 69/591 (11%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK-------KGV 87
           N + +L+FF+   +   F  D  ++ K++ IL R       R  L ++            
Sbjct: 111 NPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASA 170

Query: 88  QWDE------------DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
            WDE             +F+++++ + +KG+ + ++ +FD M + G   S++S ++L   
Sbjct: 171 VWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSN 230

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           +++ G    A   + +M++ GI P   +Y +M+  +    +++ A  F ++M+      +
Sbjct: 231 LVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPN 290

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VVTYN++I+GY     +  A+K+ A M EK I     +YT +IKGY    + + A ++  
Sbjct: 291 VVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIG 350

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCK 314
            M   ++  +   Y  L+   C AG++ +  ++   M++  +  K N+V    L+   CK
Sbjct: 351 CMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLK--VGLKMNTVICNSLINGYCK 408

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            GH+N AA+VL +M   ++  ++  Y  L++ FCK E + +A KL D++  K +      
Sbjct: 409 LGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGV------ 462

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV----------LDP---------- 414
             +    +YN ++++L H G    A   +  + K+GV          LD           
Sbjct: 463 --NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520

Query: 415 ----------------VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                             +N +I G  K      A EI   M   G P D   Y  LI+ 
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDG 580

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           Y + G   +A    D    DG S ++ ++ S++  +F    +Q  + ++  M  + +  N
Sbjct: 581 YCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPN 640

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGK 566
           +     ++     +G +++A      M+  G  PN      ++S L   GK
Sbjct: 641 VVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGK 691



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 125/540 (23%), Positives = 236/540 (43%), Gaps = 86/540 (15%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           ++G +N A  +L+ M    ++ D   +  L++ + K+    ++ K+ D M   GV  +V 
Sbjct: 408 KLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVV 467

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L K +   G    A   +N M   G+ P   TY  +L  FF     + A+  ++D 
Sbjct: 468 TYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDA 527

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            S+G +  +  YNTMI G+ + +K+ +A+++F +MKE    P  I+Y T+I GY  V   
Sbjct: 528 LSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNL 587

Query: 248 DDALRIFD-----------------------------------EMKSFDVKPNAVTYTAL 272
            +AL++ D                                   EMK+ ++ PN VTY +L
Sbjct: 588 VEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSL 647

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPP-------------------KDNSVFMKLLGVQC 313
           + G CD G M +      +M+++ I P                   + N +  ++  +  
Sbjct: 648 IAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDP 707

Query: 314 KSGHLNAAADVLKAMIR---------------LSIPTEAG-HYGILIENFCKAEMYDRAI 357
            + H + + ++ K+ +R               +SIP      Y I I   CK++  D   
Sbjct: 708 IAAHAH-SVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVR 766

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
           ++L  L+ K     P +       +Y  +I      G+  +A      ++  G++ + V 
Sbjct: 767 RILSDLLLKGFC--PDNY------TYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVV 818

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N LI G  K GN D A  +   + R+G+      Y  LI+ Y + G   +A    D M 
Sbjct: 819 YNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMR 878

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           E+G  P+S  + +++  L+ +G+ + +  ++  M++ G        + +++ L+ R +V+
Sbjct: 879 EEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKG------SSVMDPLVARAYVK 932



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 137/604 (22%), Positives = 270/604 (44%), Gaps = 22/604 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           +  T+  +I+   + G++  A  ++  M +K +  DE ++ VLI +Y   G V ++++I 
Sbjct: 325 NSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIR 384

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M ++G++ +    ++L     + G    A      M    ++P  + YN +L GF   
Sbjct: 385 DAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQ 444

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
                A +  ++M ++G++  VVTYNT++        ++ A  ++  M ++ + P  ++Y
Sbjct: 445 EDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTY 504

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++  +  V   D A+ I+ +  S     +   Y  ++ G C   K+V+ Q++  +M E
Sbjct: 505 CTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
              PP D   +  L+   CK G+L  A  +     R  I +    Y  LI    ++E   
Sbjct: 565 LGFPP-DEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQ 623

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
           +   LL ++  +E  L P         +Y  +I   C  G   KA   + +++ KG+   
Sbjct: 624 KLNGLLAEMKNRE--LSPNVV------TYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPN 675

Query: 415 VAFNN-LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY-ICLIESYLRKGEPADAKTAL 472
           +   + ++    + G  D A  I+  +     P  A A+ + L +S LR  E    +  +
Sbjct: 676 IIIGSKIVSSLYRHGKIDEANLILHQIADID-PIAAHAHSVELPKSDLRHLE---TQKIV 731

Query: 473 DSMIEDGHS-PASS--LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
           DS  +   S P S+  ++   +  L +   +    R++  ++ KG   +      ++ A 
Sbjct: 732 DSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHAC 791

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
              G V EA    D M+ +G VPN   +++L++ L + G    A +L +    +     +
Sbjct: 792 SAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTV 851

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSR 645
            +Y  ++D     G+T  A  +  K+ E+G      +   LI GL  EG ++Q+  +L+ 
Sbjct: 852 VTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNE 911

Query: 646 MIRG 649
           M++ 
Sbjct: 912 MMKA 915



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 138/630 (21%), Positives = 258/630 (40%), Gaps = 93/630 (14%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  ++  M+    + G+++ A   + +M +   + +   +  LI+ Y   G V  + K+ 
Sbjct: 255 DIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVL 314

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            +M + G+  + ++Y  L K   +RG+   A++    M+ + +    H Y V++  +  +
Sbjct: 315 ALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTA 374

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +++ A+R  + M   G+ ++ V  N++INGY +   +++A ++   MK+ N++P    Y
Sbjct: 375 GRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGY 434

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++ G+   E    A ++ DEM +  V    VTY  LL  L   G +     +   M +
Sbjct: 435 NTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R + P + +                                    Y  L++ F K   +D
Sbjct: 495 RGVAPNEVT------------------------------------YCTLLDAFFKVGTFD 518

Query: 355 RAIKL----LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
           RA+ +    L K   K I L            YN MI   C   +  +A+  F ++ + G
Sbjct: 519 RAMMIWKDALSKGFTKSITL------------YNTMICGFCKMEKLVQAQEIFLKMKELG 566

Query: 411 V-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
              D + +  LI G+ K GN   A ++  +  R G+    + Y  LI    R  E     
Sbjct: 567 FPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLN 626

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
             L  M     SP    + S++    + G +  A      M++KG+  N+ + +KI+ +L
Sbjct: 627 GLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSL 686

Query: 530 LMRGHVEEA---------------------LGRIDLMM------------QSGSVPNFDS 556
              G ++EA                     L + DL              ++ S+P  ++
Sbjct: 687 YRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNN 746

Query: 557 LLSVLSEKG----KTIAAVK--LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
           ++  ++  G    K I  V+  L D  L   C  D  +Y  ++ A  A GK   A+ +  
Sbjct: 747 IVYNIAITGLCKSKNIDDVRRILSDLLLKGFC-PDNYTYCSLIHACSAVGKVNEAFCLRD 805

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            ++  G V +    + LI GL + GN  +A
Sbjct: 806 DMINAGLVPNIVVYNALINGLCKSGNLDRA 835



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 5/181 (2%)

Query: 15  RALVPQFDHNLVYNV----LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           +A+     +N+VYN+    L  +KN +   +    +   G F  D  T+  +I     VG
Sbjct: 737 KAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKG-FCPDNYTYCSLIHACSAVG 795

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           K+N A C+  DM   G+  +  ++  LI    K G +  + ++F+ + + G+  +V +Y+
Sbjct: 796 KVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYN 855

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L     + GR   A    +KM  EGI P+  TY+ ++ G ++  K E ++    +M   
Sbjct: 856 TLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKA 915

Query: 191 G 191
           G
Sbjct: 916 G 916



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/189 (20%), Positives = 74/189 (39%), Gaps = 32/189 (16%)

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +++ +  KG    A    D+M + G  P+     S++ +L ++G    A  V + M+  G
Sbjct: 192 ILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALG 251

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
           +  ++     ++ A    G V+EA   +  M +S   PN                     
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPN--------------------- 290

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                      + +Y  ++D  ++ G    A  +L  + EKG   + ++   LI G  + 
Sbjct: 291 -----------VVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKR 339

Query: 635 GNTKQADIL 643
           G  +QA+ L
Sbjct: 340 GQMEQAEKL 348


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 212/458 (46%), Gaps = 13/458 (2%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G++    + + L     + G    +   F K+L +G  P   T+ +++ G  L  ++  A
Sbjct: 88  GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKA 147

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           + F + + ++G  LD V+Y T+ING  R  +   A +L   +  K + P V+ Y+T+I  
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDS 207

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +  +DA  ++ EM S  + P+ VTY++L+ G C  GK+     +   M+   I P 
Sbjct: 208 MCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINP- 266

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   F  L+   CK G +  A +VL  M++ ++  +   Y  L++ +C  +  ++A  L 
Sbjct: 267 NVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF 326

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + + ++ +   P      +  SY+ MI   C      +A   F ++  K +  + V +N+
Sbjct: 327 NVMAQRGV--TP------DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNS 378

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+ G  K G    A E+V  M  RG P +   Y  ++++  +      A   L  + E G
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG 438

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  ++  L + GR+  A +V + ++ KG   N+     ++     +G  +E L
Sbjct: 439 IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGL 498

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
             +  M  +G +PN   ++ L+  L EK +   A KLL
Sbjct: 499 AMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLL 536



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 202/441 (45%), Gaps = 44/441 (9%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL F   V   G F  D+ ++  +I  L RVG+   A  +L  +  K V+ +  M+  +I
Sbjct: 147 ALYFHDKVVAQG-FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTII 205

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +S  K  +V ++  ++  M    +   V +Y +L       G+   A   FN+M+S+ I 
Sbjct: 206 DSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNIN 265

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P  +T+++++ GF    K+  A      M  + + LDVVTYN++++GY   K++++A+ L
Sbjct: 266 PNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSL 325

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M ++ + P V SY+ MI G+  ++  D+A+++F+EM    + PN VTY +L+ GLC 
Sbjct: 326 FNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCK 385

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           +G+     +++ EM +R   P +   +  +L   CK+ H++ A  +L  +    I  +  
Sbjct: 386 SGRTSCALELVDEMHDRG-QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIF 444

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y +LI   CK    D A K+ + L+ K                Y+P I           
Sbjct: 445 TYTVLINGLCKVGRLDDAQKVFEDLLVK---------------GYSPNIY---------- 479

Query: 399 AEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                             + +LI G   +G  D    ++  M   G   +A  Y  LI S
Sbjct: 480 -----------------TYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHS 522

Query: 459 YLRKGEPADAKTALDSMIEDG 479
              K E   A+  L  MI  G
Sbjct: 523 LFEKDENDKAEKLLREMIARG 543



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/462 (22%), Positives = 216/462 (46%), Gaps = 29/462 (6%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G++ D     +L+  + + G ++ S  +F  + + G      ++  L K +  +G 
Sbjct: 84  MEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGE 143

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A  + +K++++G +  + +Y  ++ G     + + A++    +  + +  +VV Y+T
Sbjct: 144 VHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYST 203

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+   + K +++A  L+ EM  K I P V++Y+++I G+  V +   A+ +F+ M S +
Sbjct: 204 IIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN 263

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + PN  T++ L+ G C  GK+ E + VL  M+++ +   D   +  L+   C    +N A
Sbjct: 264 INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVK-LDVVTYNSLMDGYCLVKQVNKA 322

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLDM 378
             +   M +  +  +   Y I+I  FCK +M D A+KL +++  K+I   ++   S +D 
Sbjct: 323 KSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDG 382

Query: 379 EASS------------------------YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
              S                        YN ++  +C N    KA +   ++ +KG+  D
Sbjct: 383 LCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPD 442

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              +  LI G  K G  D A ++ + +  +G   +   Y  LI  +  KG   +    L 
Sbjct: 443 IFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLS 502

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            M ++G  P +  +  ++ SLFE      A ++++ M+ +G+
Sbjct: 503 KMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/511 (21%), Positives = 236/511 (46%), Gaps = 17/511 (3%)

Query: 149 FNKMLSEGIE-PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           FN++L +    P    +  +L     + + +TA+   + M+  GI  D +T N ++N ++
Sbjct: 45  FNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFS 104

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           +   +  +  +FA++ +K   P  +++T +IKG         AL   D++ +   + + V
Sbjct: 105 QLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQV 164

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           +Y  L+ GLC  G+     ++LR +  + + P +  ++  ++   CK   +N A D+   
Sbjct: 165 SYGTLINGLCRVGETKAAVQLLRRVDGKLVRP-NVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M+   I  +   Y  LI  FC       A+ L ++++   I        +    +++ +I
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNI--------NPNVYTFSILI 275

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
              C  G+  +A+     +MKK V LD V +N+L+ G+      + A  +  +M +RGV 
Sbjct: 276 DGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVT 335

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D  +Y  +I  + +     +A    + M      P    + S+++ L + GR   A  +
Sbjct: 336 PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALEL 395

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           +  M ++G   N+     IL+A+    HV++A+  +  + + G  P+   +  L++ L +
Sbjct: 396 VDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCK 455

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+   A K+ +  L +    ++ +Y  +++     G      ++L K+ + G + +  +
Sbjct: 456 VGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAIT 515

Query: 624 SDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
            + LI  L ++    +A+   +++R  ++RG
Sbjct: 516 YEILIHSLFEKDENDKAE---KLLREMIARG 543


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/578 (22%), Positives = 241/578 (41%), Gaps = 72/578 (12%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           H  K+ + A+ FF ++ R+  F    + + K+I +  R+ + + A  +   M  + +  +
Sbjct: 82  HYFKSLDDAIDFFDYMVRSRPFYTAVDCN-KVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR--------- 141
              F +LI+ +     +  S+  F  + +LG +  V +++ L   +    R         
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200

Query: 142 YMM-AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           YM+     F++M+  G+ P   T+N ++ G  L  ++  A      M  +G+ +DVVTY 
Sbjct: 201 YMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 260

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T++NG  +      A  L ++M+E +I+P V+ Y+ +I          DA  +F EM   
Sbjct: 261 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 320

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + PN  TY  ++ G C  G+  + Q++LR+M+ER I P D   F  L+    K G L  
Sbjct: 321 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP-DVLTFNALISASVKEGKLFE 379

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII----------- 369
           A  +   M+   I  +   Y  +I  FCK   +D A  + D +   +++           
Sbjct: 380 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 439

Query: 370 ----------LRPQS--TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV------ 411
                     LR  S   L    ++YN +I   C       A+  F++++  GV      
Sbjct: 440 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 499

Query: 412 ------------------------------LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
                                         LD VA+N +I G  K    D A+++   + 
Sbjct: 500 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 559

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
             GV  D   Y  +I  +  K   +DA      M ++GH P +S + +++    + G + 
Sbjct: 560 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 619

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            +  ++  M   G   +     K++  L+  G ++++ 
Sbjct: 620 KSIELISEMRSNGFSGDA-FTIKMVADLITDGRLDKSF 656



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 226/494 (45%), Gaps = 27/494 (5%)

Query: 29  VLHGA----KNSEHALQFFRWVERAGLFNHDRETHLK--------MIEILGRVGKLNHAR 76
           +LHG     + SE    F   VE   LF+   E  L         +I  L   G++  A 
Sbjct: 182 LLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 241

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            ++  M  KG+  D   +  ++    K G  + ++ +   M++  ++  V  Y A+   +
Sbjct: 242 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 301

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            + G +  A+  F++ML +GI P   TYN M+ GF    +   A R   DM  R I+ DV
Sbjct: 302 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 361

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           +T+N +I+   +  K+ EAEKL  EM  + I P  ++Y +MI G+    R DDA  +FD 
Sbjct: 362 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 421

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M S    P+ VT+  ++   C A ++ E  ++LRE+  R +   + + +  L+   C+  
Sbjct: 422 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA-NTTTYNTLIHGFCEVD 476

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
           +LNAA D+ + MI   +  +     IL+  FC+ E  + A++L       E+I    S +
Sbjct: 477 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF------EVI--QMSKI 528

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
           D++  +YN +I  +C   +  +A   F  L   GV  D   +N +I G   +     A  
Sbjct: 529 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 588

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   M   G   D   Y  LI   L+ GE   +   +  M  +G S  +   + V + L 
Sbjct: 589 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LI 647

Query: 496 EDGRVQTASRVMKS 509
            DGR+  +   M S
Sbjct: 648 TDGRLDKSFSDMLS 661



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 114/555 (20%), Positives = 228/555 (41%), Gaps = 28/555 (5%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++  FD M +     +    + +  + +R  R  +A   + KM    I    +++N+
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN----------RFKKMDEAE 216
           ++  F    KL  ++  F  +   G   DVVT+NT+++G             F  M E  
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            LF +M E  + P VI++ T+I G     R  +A  + ++M    +  + VTY  ++ G+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  G       +L +M E +I P D  ++  ++   CK GH + A  +   M+   I   
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKP-DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 325

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  +I+ FC    +  A +LL  ++E+EI        + +  ++N +I      G+ 
Sbjct: 326 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI--------NPDVLTFNALISASVKEGKL 377

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +AE    +++ + +  D V +N++I G  K    D A  +  +M       D   +  +
Sbjct: 378 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTI 433

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+ Y R     +    L  +   G    ++ + +++    E   +  A  + + M+  GV
Sbjct: 434 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 493

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVK 572
             +      +L        +EEAL   +++  S        ++ ++  + +  K   A  
Sbjct: 494 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 553

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           L           D+ +Y  ++          +A  +  K+ + G   D  + + LI G  
Sbjct: 554 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 613

Query: 633 QEGNT-KQADILSRM 646
           + G   K  +++S M
Sbjct: 614 KAGEIDKSIELISEM 628



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/449 (20%), Positives = 183/449 (40%), Gaps = 43/449 (9%)

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G + FK +D+A   F  M       T +    +I  +V + R D A+ ++ +M+   + 
Sbjct: 79  SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N  ++  L+   CD  K+        ++ +    P D   F  LL   C    ++ A  
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQP-DVVTFNTLLHGLCLEDRISEALA 197

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +   M+      E G                    L D++VE  I L P         ++
Sbjct: 198 LFGYMV------ETG-------------------SLFDQMVE--IGLTPV------VITF 224

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I  LC  G+  +A     +++ KG+ +D V +  ++ G  K G+  SA  ++  M  
Sbjct: 225 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 284

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
             +  D   Y  +I+   + G  +DA+     M+E G +P    +  +++     GR   
Sbjct: 285 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 344

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A R+++ M+E+ +  ++     ++ A +  G + EA    D M+     P+   ++S++ 
Sbjct: 345 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 404

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
              +  +   A  + D         D+ ++  ++D    A +      +L +I  +G V 
Sbjct: 405 GFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 460

Query: 620 DWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           +  + + LI G  +  N   A D+   MI
Sbjct: 461 NTTTYNTLIHGFCEVDNLNAAQDLFQEMI 489


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 233/491 (47%), Gaps = 13/491 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +++ L   G++  AR +  +M       D   + +LI  +   G ++ +VK+ D M   G
Sbjct: 265 LLKALCDAGRVKDARQLFDEMASAP---DVVTYGILIHGHCALGELENAVKLLDEMVAGG 321

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           VE +   Y ++  L+  +G    A R    M+   +      Y  +L GF     L +A 
Sbjct: 322 VEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSAR 381

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R+F++M+ +G++ D VTY TMING  R  +++EAEKL  EM  + ++   ++YT +I GY
Sbjct: 382 RWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGY 441

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               +  +A ++ + M    V PN VTYTAL  GLC  G +    ++L EM  + +   +
Sbjct: 442 CKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGL-ELN 500

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   CK+G+L  A   +  M    +  +   Y  LI+  CK+   DRA  LL 
Sbjct: 501 ACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQ 560

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNL 420
           ++++K I  +P         +YN ++   C +G+    +     +++K +    A +N+L
Sbjct: 561 EMLDKGI--KPTIV------TYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSL 612

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           ++ +  E N  S  EI K M  R V  + + Y  LI+ + +     +A    D MI+ G 
Sbjct: 613 MKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGF 672

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
              ++ + +++  L +  +   A  +   M ++G+    D+    ++      ++E  L 
Sbjct: 673 RLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLA 732

Query: 541 RIDLMMQSGSV 551
             D ++++  V
Sbjct: 733 LCDELVEASIV 743



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 187/417 (44%), Gaps = 51/417 (12%)

Query: 1   MAERAWTTRLQNKIRALVPQ---FDHNLVYNVLHGAKNSEHALQFFRW---VERAGLFNH 54
           + ++ W +     +  +V +    D  L   VL G  N    +   RW   ++R GL   
Sbjct: 336 LCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLAT- 394

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  MI  L R  +L  A  +L +M  + +  DE  + VLI+ Y K+G + E+ ++ 
Sbjct: 395 DGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMH 454

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M Q GV  +V +Y AL   + ++G    A    ++M ++G+E    TYN ++ G   +
Sbjct: 455 NAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKA 514

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             LE A+R   DM +  +  DV TY T+I+   +   +D A  L  EM +K I+PT+++Y
Sbjct: 515 GYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTY 574

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G+    R +   ++ D M   ++ PNA TY +L+   C    M    ++ + M  
Sbjct: 575 NVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRS 634

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R + P +N+                                    Y ILI+  CKA    
Sbjct: 635 RDVGPNENT------------------------------------YNILIKGHCKARNMK 658

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
            A+   D++++K   L         A+SY+ +I+ L    +  +A   F  + K+G+
Sbjct: 659 EALYFHDEMIQKGFRL--------TATSYSALIRLLNKKKKFVEARELFHDMRKEGL 707



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 194/426 (45%), Gaps = 25/426 (5%)

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           FL L L +A      ++  GIS      N +++       +DEA +LF E+  KN    V
Sbjct: 209 FLLLCLPSA-PLLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHKN----V 259

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            SY  ++K      R  DA ++FDEM S    P+ VTY  L+ G C  G++    K+L E
Sbjct: 260 CSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDE 316

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           MV   + P + +V+  ++ + C  G ++ A  V++ M++  +  +   Y  ++  FC   
Sbjct: 317 MVAGGVEP-NATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKG 375

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
               A +  D++  K         L  +  +Y  MI  LC   +  +AE   +++  + +
Sbjct: 376 DLVSARRWFDEMQRK--------GLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRL 427

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            +D V +  LI G+ K G    AF++   M +RGV  +   Y  L +   ++G+   A  
Sbjct: 428 DVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANE 487

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L  M   G    +  + S++  L + G ++ A R M  M    +K ++     +++AL 
Sbjct: 488 LLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALC 547

Query: 531 MRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G ++ A   +  M+  G  P    ++ L++     G+     KLLD+ L ++   + A
Sbjct: 548 KSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAA 607

Query: 588 SYEKVL 593
           +Y  ++
Sbjct: 608 TYNSLM 613



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 203/468 (43%), Gaps = 45/468 (9%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           AG    +   +  ++ +L   G ++ A  ++ DM ++ V  DE ++  ++  +  KG + 
Sbjct: 319 AGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLV 378

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
            + + FD M++ G+     +Y  +   + R      A++   +M +  ++    TY V++
Sbjct: 379 SARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLI 438

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G+    K+  A +    M  RG++ +VVTY  + +G  +   +  A +L  EM  K +E
Sbjct: 439 DGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE 498

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
               +Y ++I G       + A+R   +M +  +KP+  TYT L+  LC +G +     +
Sbjct: 499 LNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSL 558

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L+EM+++ I P                                +I T    Y +L+  FC
Sbjct: 559 LQEMLDKGIKP--------------------------------TIVT----YNVLMNGFC 582

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC-HNGQTGKAEIFFRQLM 407
            +   +   KLLD ++EK I   P       A++YN +++  C  N      EI+     
Sbjct: 583 MSGRVEGGKKLLDWMLEKNI--HPN------AATYNSLMKQYCIENNMKSTTEIYKGMRS 634

Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +    +   +N LI+GH K  N   A      M ++G    A +Y  LI    +K +  +
Sbjct: 635 RDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVE 694

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           A+     M ++G +  S ++   ++  F +  +++   +   +VE  +
Sbjct: 695 ARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASI 742



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 124/295 (42%), Gaps = 27/295 (9%)

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
           D AI+L  +L  K +             SYN +++ LC  G+   A   F ++      D
Sbjct: 245 DEAIELFQELPHKNVC------------SYNILLKALCDAGRVKDARQLFDEM--ASAPD 290

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +  LI GH   G  ++A +++  M   GV  +A  Y  ++     KG  +DA   ++
Sbjct: 291 VVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVE 350

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M++       +L+ +V+      G + +A R    M  KG+  +      ++  L    
Sbjct: 351 DMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAV 410

Query: 534 HVEEA--------LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
            +EEA          R+D+   + +V     L+    ++GK   A ++ +  + R    +
Sbjct: 411 ELEEAEKLLQEMWARRLDVDEVTYTV-----LIDGYCKRGKMAEAFQMHNAMVQRGVTPN 465

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           + +Y  + D L   G    A  +L ++  KG   +  + + LI GL + G  +QA
Sbjct: 466 VVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQA 520



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 16/165 (9%)

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH-----VEEALGR 541
           +  ++++L + GRV+ A ++   M         D+V      +L+ GH     +E A+  
Sbjct: 262 YNILLKALCDAGRVKDARQLFDEMASAP-----DVVTY---GILIHGHCALGELENAVKL 313

Query: 542 IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
           +D M+  G  PN   + S++++L +KG    A+++++  + R  I+D A Y  VL     
Sbjct: 314 LDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCN 373

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            G  ++A     ++  KG  TD  +   +I GL +    ++A+ L
Sbjct: 374 KGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKL 418


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/537 (24%), Positives = 239/537 (44%), Gaps = 15/537 (2%)

Query: 5   AWTTR-LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWV-ERAGLFNHDRETHLKM 62
            W+ + L N + A+    +  L  N+ H  + S+ AL       +R     +  E+ ++ 
Sbjct: 26  TWSRKHLGNCVFAVSKYENSGLKGNLQHSERFSKGALNGVESSPDRVNTSLNFEESEIRH 85

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           +  L R G+L      L  M  KG   D      LI  + K G  + + +I  I+++ G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
              V SY+ L     + G    A R  ++M   G+ P   TY+ +L       KL+ A++
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
                       DVVT   +I+   +   + +A KLF EM+ K  +P V++Y  +IKG+ 
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              R D+A+R   ++ S+  +P+ +++  +L  LC  G+ ++  K+L  M+ +   P   
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLP-SV 321

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             F  L+   C+ G L  A +VL+ M +      +  +  LI+ FC  +  DRAI+ L+ 
Sbjct: 322 VTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEI 381

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLI 421
           +V +            +  +YN ++  LC +G+   A +   QL  KG     +++N +I
Sbjct: 382 MVSRGCY--------PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVI 433

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G  K G  + A E+++ M  +G+  D      ++    R+G+  +A      +      
Sbjct: 434 DGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIR 493

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           P + ++ S++  L +  +   A   +  MV KG K        +++ +   G  E+A
Sbjct: 494 PNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDA 550



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 207/472 (43%), Gaps = 35/472 (7%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +LE   RF E M ++G S DV+    +I  + +  +   A ++   ++E      V SY 
Sbjct: 94  ELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYN 153

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I GY      ++ALR+ D M    V PNA TY A+L  LCD GK+ +  +VL   ++ 
Sbjct: 154 VLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQS 210

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P D      L+   CK   +  A  +   M       +   Y +LI+ FCK    D 
Sbjct: 211 KCYP-DVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269

Query: 356 AIKLLDKL---------VEKEIILRPQST-------LDMEAS-----------SYNPMIQ 388
           AI+ L KL         +   +ILR   +       + + A+           ++N +I 
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329

Query: 389 HLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G  GKA      + K G   +  +FN LI+G       D A E ++IM  RG   
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  L+ +  + G+  DA   L  +   G SP+   + +V++ L + G+ + A  ++
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           + M  KG+K +L     ++  L   G V EA+     + +    PN   ++S+++ L + 
Sbjct: 450 EEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKS 509

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
            +T  A+  L   + + C    A+Y  ++  +   G   +A  +  ++  +G
Sbjct: 510 QQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 162/335 (48%), Gaps = 4/335 (1%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
            A++ F  +   G    D  T+  +I+   + G+L+ A   L  +P  G Q D     ++
Sbjct: 234 QAMKLFNEMRNKGC-KPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMI 292

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           + S    G   +++K+   M + G   SV +++ L   + ++G    A      M   G 
Sbjct: 293 LRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGH 352

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
            P   ++N ++ GF     ++ AI + E M SRG   D+VTYN ++    +  K+D+A  
Sbjct: 353 TPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVV 412

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           + +++  K   P++ISY T+I G + V +A+ A+ + +EM    +KP+ +T T+++ GL 
Sbjct: 413 ILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLS 472

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI-PTE 336
             GK+ E  K    +    I P +  ++  ++   CKS   + A D L  M+     PTE
Sbjct: 473 REGKVREAMKFFHYLKRFAIRP-NAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTE 531

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
           A  Y  LI+      + + A KL ++L  + ++ R
Sbjct: 532 A-TYTTLIKGITYEGLAEDASKLSNELYSRGLVKR 565



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 175/397 (44%), Gaps = 16/397 (4%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           ++  R  + M +    P+ +  TAL+   C  G+     +++  ++E      D + +  
Sbjct: 96  EEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIM-GILEESGAVIDVTSYNV 154

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   CKSG +  A   L+ + R+ +   A  Y  ++ + C      +A+++L + +   
Sbjct: 155 LISGYCKSGEIEEA---LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQL--- 208

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
                QS    +  +   +I   C     G+A   F ++  KG   D V +N LI+G  K
Sbjct: 209 -----QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCK 263

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G  D A   +K +   G   D  ++  ++ S    G   DA   L +M+  G  P+   
Sbjct: 264 GGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVT 323

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F  ++  L + G +  A  V++ M + G   N      +++       ++ A+  +++M+
Sbjct: 324 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV 383

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
             G  P+   ++ LL+ L + GK   AV +L     + C   L SY  V+D LL  GK  
Sbjct: 384 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 443

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            A  +L ++  KG   D  +   ++ GL++EG  ++A
Sbjct: 444 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREA 480



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 107/458 (23%), Positives = 188/458 (41%), Gaps = 89/458 (19%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I    ++G+  +A  I+  + + G   D   + VLI  Y K G ++E++++ D   ++G
Sbjct: 120 LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLD---RMG 176

Query: 122 VERSVKSYDALFKLILRRG----------RYMMAKRY----------------------- 148
           V  +  +YDA+   +  RG          R + +K Y                       
Sbjct: 177 VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 236

Query: 149 --FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
             FN+M ++G +P   TYNV++ GF    +L+ AIRF + + S G   DV+++N ++   
Sbjct: 237 KLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSL 296

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVI---------------------------------- 232
               +  +A KL A M  K   P+V+                                  
Sbjct: 297 CSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 356

Query: 233 -SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            S+  +I+G+   +  D A+   + M S    P+ VTY  LL  LC  GK+ +   +L +
Sbjct: 357 RSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 416

Query: 292 MVERYIPP---KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           +  +   P     N+V   LL    K G    A ++L+ M    +  +      ++    
Sbjct: 417 LSSKGCSPSLISYNTVIDGLL----KVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLS 472

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +      A+K    L  K   +RP + +      YN +I  LC + QT  A  F   ++ 
Sbjct: 473 REGKVREAMKFFHYL--KRFAIRPNAFI------YNSIITGLCKSQQTSLAIDFLADMVA 524

Query: 409 KGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           KG     A +  LI+G + EG  + A ++   +  RG+
Sbjct: 525 KGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 81/181 (44%)

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
           +R GE  +    L+ M   G SP      +++    + GR + AS++M  + E G   ++
Sbjct: 90  IRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDV 149

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLG 579
                ++      G +EEAL  +D M  S +   +D++L  L ++GK   A+++L   L 
Sbjct: 150 TSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
             C  D+ +   ++DA         A  +  ++  KG   D  + + LI G  + G   +
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269

Query: 640 A 640
           A
Sbjct: 270 A 270


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 232/508 (45%), Gaps = 27/508 (5%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
            + +  AL+ F  V R      + + +  +I +L        ARC++ D           
Sbjct: 47  CRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRD----------- 95

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
               LI+        +    +F+++ +L  E S  + +    LI+      + +      
Sbjct: 96  ----LIQCLQNSRRSRICCSVFNVLSRL--ESSKFTPNVFGVLIIAFSEMGLVEEALWVY 149

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
               + P     N++L G     + +T  + + DM +RG S +VVTY T+I+G  R    
Sbjct: 150 YKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            +A +LF EM EK I PTV+ YT +I+G     R  +A  +F  M++  + PN  TY  +
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C    + +  ++ +EM+   + P +   F  L+   CK+  + +A   L  M    
Sbjct: 270 MDGYCKIAHVKKALELYQEMLGDGLLP-NVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  LI+ +CKA     A+ L  ++ + EI+         +  +Y+ +I+ LC 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL--------PDVFTYSILIKGLCG 380

Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  +A+   +++ KKG L + V +N LI G+ KEGN + A E+   M  +G+  +   
Sbjct: 381 VDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIIT 440

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +  LI+ Y + G+   A      M+  G  P    + ++++  F+DG  + A R+ K M 
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEAL 539
           E G+  N+  ++ +++ L   G + +A+
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAI 528



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 186/430 (43%), Gaps = 63/430 (14%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           DM  +G   +   +  LI+   ++G   ++ ++FD M +  +  +V  Y  L + +    
Sbjct: 183 DMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGES 242

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A+  F  M + G+ P  +TYN M+ G+     ++ A+  +++M   G+  +VVT+ 
Sbjct: 243 RISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFG 302

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G  +  +M  A K   +M    + P +  Y  +I GY       +AL +  E++  
Sbjct: 303 ILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKH 362

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLN 319
           ++ P+  TY+ L+ GLC   +M E   +L+EM ++   P  N+V +  L+   CK G++ 
Sbjct: 363 EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP--NAVTYNTLIDGYCKEGNME 420

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A +V   M    I      +  LI+ +CKA   + A+ L                    
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL-------------------- 460

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
                                  + +++ KG+L D VA+  LI GH K+GN   AF + K
Sbjct: 461 -----------------------YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPAD------AKTA----------LDSMIEDGHSP 482
            M   G+  +     CLI+   + G  +D      AKT           LD  +    S 
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSL 557

Query: 483 ASSLFRSVME 492
           A SLFR + E
Sbjct: 558 ALSLFRGISE 567



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 168/379 (44%), Gaps = 13/379 (3%)

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N +++G  +  + D   K++ +M  +   P V++Y T+I G         A R+FDEM  
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P  V YT L+ GLC   ++ E + + R M    + P +   +  ++   CK  H+ 
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLP-NLYTYNTMMDGYCKIAHVK 280

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A ++ + M+   +      +GILI+  CK +    A K L  +    ++  P   +   
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV--PNIFV--- 335

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
              YN +I   C  G   +A     ++ K  +L D   ++ LI+G       + A  +++
Sbjct: 336 ---YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M ++G   +A  Y  LI+ Y ++G    A      M E G  P    F ++++   + G
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           +++ A  +   MV KG+  ++     +++     G+ +EA      M ++G  PN     
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512

Query: 556 SLLSVLSEKGKTIAAVKLL 574
            L+  L + G+   A+KL 
Sbjct: 513 CLIDGLCKDGRISDAIKLF 531



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 140/300 (46%), Gaps = 3/300 (1%)

Query: 63  IEILGRVG--KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           I I G  G  +++ A  +   M   G+  +   +  +++ Y K   V+++++++  M   
Sbjct: 233 ILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGD 292

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+  +V ++  L   + +    + A+++   M S G+ P    YN ++ G+  +  L  A
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +    +++   I  DV TY+ +I G     +M+EA+ L  EMK+K   P  ++Y T+I G
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y      + A+ +  +M    ++PN +T++ L+ G C AGKM     +  EMV + + P 
Sbjct: 413 YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP- 471

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+    K G+   A  + K M    +         LI+  CK      AIKL 
Sbjct: 472 DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 117/228 (51%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +  ++  AR  L+DM   GV  +  ++  LI+ Y K G + E++ +   +++  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +   V +Y  L K +    R   A     +M  +G  P   TYN ++ G+     +E AI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
                M  +GI  +++T++T+I+GY +  KM+ A  L+ EM  K + P V++YT +I G+
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
                  +A R+  EM+   + PN  T + L+ GLC  G++ +  K+ 
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 116/529 (21%), Positives = 229/529 (43%), Gaps = 33/529 (6%)

Query: 21  FDHNLVYNVL----HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           F   ++Y +L     G      A   FR +  +G+   +  T+  M++   ++  +  A 
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLP-NLYTYNTMMDGYCKIAHVKKAL 283

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            +  +M   G+  +   F +LI+   K   +  + K    M   GV  ++  Y+ L    
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            + G    A    +++    I P   TY++++ G     ++E A    ++MK +G   + 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VTYNT+I+GY +   M++A ++ ++M EK IEP +I+++T+I GY    + + A+ ++ E
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    + P+ V YTAL+ G    G   E  ++ +EM E  + P   ++   + G+ CK G
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL-CKDG 522

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL------ 370
            ++ A  +  A  +    T       L  +    +M   A+ L   + E  I +      
Sbjct: 523 RISDAIKLFLA--KTGTDTTGSKTNELDRSL--YQMCSLALSLFRGISEPCICVIRVTKL 578

Query: 371 -----RPQSTL--DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK--GVLDPVAFNNLI 421
                +P++ L   ++    N  ++    +  T K  +FFR L++K    +D  +    +
Sbjct: 579 FATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFAL 638

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
           +  + + +     ++  ++   G          LI  Y   G  ADA    D +      
Sbjct: 639 KACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEI------ 692

Query: 482 PASSL--FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           P+ +L  + SV+ +  ++ R   A ++ + M    V+ ++  V   L A
Sbjct: 693 PSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSA 741



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/427 (20%), Positives = 183/427 (42%), Gaps = 53/427 (12%)

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           + + ++     P V  +  +I  +  +   ++AL ++ +M   DV P       +L GL 
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             G+   + KV  +MV R                        A+ +V+            
Sbjct: 170 KKGRFDTMWKVYGDMVAR-----------------------GASPNVVT----------- 195

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             YG LI+  C+   + +A +L D+++EK+I   P   +      Y  +I+ LC   +  
Sbjct: 196 --YGTLIDGCCRQGDFLKAFRLFDEMIEKKIF--PTVVI------YTILIRGLCGESRIS 245

Query: 398 KAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +AE  FR +   G+L  +  +N ++ G+ K  +   A E+ + M   G+  +   +  LI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           +   +  E   A+  L  M   G  P   ++  +++   + G +  A  +   + +  + 
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            ++   + +++ L     +EEA G +  M + G +PN   +++L+    ++G    A+++
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                 +    ++ ++  ++D    AGK   A  +  +++ KG + D  +   LI G  +
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 634 EGNTKQA 640
           +GNTK+A
Sbjct: 486 DGNTKEA 492



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 28/236 (11%)

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            ++I+ Y+    + +A  +F E+  KN+    IS+T++I  YV  +R + AL++F +M+ 
Sbjct: 670 TSLISMYSATGNVADAHNMFDEIPSKNL----ISWTSVISAYVDNQRPNKALQLFRQMQM 725

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK----DNSVFMKLLGVQCKS 315
            DV+P+ VT T  L    D G +      + E +  YI  +    D  +   L+ +  K 
Sbjct: 726 DDVQPDIVTVTVALSACADLGAL-----DMGEWIHAYIRHRGLDTDLCLNNSLINMYSKC 780

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G +  A         L +P +    G+L+   C         K   + ++++  LRP+  
Sbjct: 781 GEIGTARR-----FSLVLPNDVTFMGVLMA--CSHAGLVEEGKQHFRSMKEDYSLRPR-- 831

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
                S +  M+  LC  G   +A  F  ++  +   + V +  L+   S +G  D
Sbjct: 832 ----ISHFGCMVDLLCRAGLLTEAYEFILKMPVRP--NAVVWRTLLGACSLQGMWD 881


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 141/615 (22%), Positives = 277/615 (45%), Gaps = 16/615 (2%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  VL+   +   A  +F  V       H  ET   M+EIL    ++     +   M  +
Sbjct: 94  VMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQ 153

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
            ++ D + + ++ +    +G ++++   F  M++ G   +  SY+ L  L+L+ G    A
Sbjct: 154 IIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREA 213

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
              + +M+ EG++P+  T++ ++         ET     E+M+S G+  ++ TY   I  
Sbjct: 214 LEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRV 273

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             R  ++DEA ++   M++    P V++YT +I       + DDA+ +F +MK+   KP+
Sbjct: 274 LGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPD 333

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
            VTY  +L    D G +  V++   EM  + Y P  D   F  L+   CK+G+++ A  +
Sbjct: 334 RVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAP--DVITFTILVNALCKAGNIDEAFHL 391

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L  M +  +      Y  LI    +    D A+ L + +    ++  P       A +Y 
Sbjct: 392 LDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVV--PT------AYTYI 443

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
             I     +G++ KA   F ++  +G+  + VA N  +   ++ G    A  I   +   
Sbjct: 444 LFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSN 503

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  D+  Y  +++ Y + G+  +A   L  M E+   P   +  S++ +L++ GRV  A
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
            ++   + +  +   +     ++  L   G V+ A+     M  +G  PN   F+++L  
Sbjct: 564 WKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDC 623

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L +  +   A+K+L      +C+ D+ ++  ++  L+   +  +A   LF  M+K    D
Sbjct: 624 LCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAI-WLFHQMKKMLTPD 682

Query: 621 WKSSDKLIAGLNQEG 635
             +   L+ G+ + G
Sbjct: 683 CVTLCTLLPGVVKNG 697



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 141/631 (22%), Positives = 268/631 (42%), Gaps = 56/631 (8%)

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            L  +G+L  A+ I   +   G+  D   + ++++ Y K G V E++++   M +   E  
Sbjct: 484  LAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD 543

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
            +   ++L   + + GR   A + F ++    + PT  TYN ++ G     +++ A+  F 
Sbjct: 544  IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFA 603

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
             M   G   + +T+NT+++   +  ++D A K+  +M   N  P V+++ T+I G V  +
Sbjct: 604  SMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEK 663

Query: 246  RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER---YIP---- 298
            R  DA+ +F +MK   + P+ VT   LLPG+   G M +  K+  + V R   Y+     
Sbjct: 664  RVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFW 722

Query: 299  ----------------------------PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
                                         KD SV M ++ V CK      A  V     +
Sbjct: 723  EDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTK 782

Query: 331  -LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
             L +      Y  LIE F      + A  L  ++  K     P      +  +YN ++  
Sbjct: 783  ELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEM--KNAGCAP------DVFTYNLLLDA 834

Query: 390  LCHNGQTGKA----EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
               +G++GK     E++ + +      + +  N +I    K  + D A ++   +     
Sbjct: 835  ---HGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDF 891

Query: 446  PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
                  Y  L++  L+ G   +AK   + M++ G  P ++++  ++    + G V TA  
Sbjct: 892  SPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACE 951

Query: 506  VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
            + K MV +G++ +L     ++  L   G V++AL   + + Q+G   +   ++ ++  L 
Sbjct: 952  LFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLG 1011

Query: 563  EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
               +   A+ L D    R    DL +Y  ++  L  AG    A  +  ++   G   +  
Sbjct: 1012 RSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVF 1071

Query: 623  SSDKLIAGLNQEGNTKQA-DILSRMIRGEMS 652
            + + LI G +  GN+  A  +  RM+ G  S
Sbjct: 1072 TYNALIRGYSMSGNSDSAYAVYKRMMVGGCS 1102



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 146/667 (21%), Positives = 280/667 (41%), Gaps = 51/667 (7%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + ++ + L  A   + A++ F  + +A     DR T++ M++     G L   +    +M
Sbjct: 302 YTVLIDALCTAGKLDDAMELFVKM-KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM 360

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G   D   F +L+ +  K G + E+  + D+M++ GV  ++ +Y+ L   +LR  R 
Sbjct: 361 EADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRL 420

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   FN M + G+ PT +TY + +  +  S + + A+  FE MK RGI+ ++V  N  
Sbjct: 421 DDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNAS 480

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           +       ++ EA+ +F  +K   + P  ++Y  M+K Y    + D+A+ +  +M     
Sbjct: 481 LYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQC 540

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P+ +   +L+  L  AG++ E  K+   + +  + P   +    + G+  K G +  A 
Sbjct: 541 EPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLG-KEGQVQRAM 599

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++  +M     P     +  +++  CK +  D A+K+L K+     +  P      +  +
Sbjct: 600 ELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCM--P------DVLT 651

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVK-IMG 441
           +N +I  L    +   A   F Q+ K    D V    L+ G  K G  + AF+I +  + 
Sbjct: 652 FNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVH 711

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           R GV  D   +  L+   L +          D ++        S+   +++ L +  +  
Sbjct: 712 RLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQAL 771

Query: 502 TASRV-MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
            A  V ++   E GVK  L+    ++E  L   + E A      M  +G  P+   ++ L
Sbjct: 772 VAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLL 831

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDC--------------------------IIDLAS--- 588
           L    + GK     +L +  +   C                            DL S   
Sbjct: 832 LDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDF 891

Query: 589 ------YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-D 641
                 Y  +LD LL +G+   A  +  ++++ G   +    + LI G  + G+   A +
Sbjct: 892 SPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACE 951

Query: 642 ILSRMIR 648
           +  RM+R
Sbjct: 952 LFKRMVR 958



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 184/389 (47%), Gaps = 26/389 (6%)

Query: 116  IMKQLGVERSVKSYDAL---------------FKLILRRGRYMMAKRYFNKMLSE-GIEP 159
            I+ Q G E+++   D L                K++ +  + ++A+  F +   E G++P
Sbjct: 729  ILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKP 788

Query: 160  TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
            T  +YN ++ GF      E A   F +MK+ G + DV TYN +++ + +  K++E  +L+
Sbjct: 789  TLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELY 848

Query: 220  AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
             +M   + +P  I++  +I   V     D AL +F ++ S D  P   TY  LL GL  +
Sbjct: 849  EQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKS 908

Query: 280  GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
            G++ E +++  EMV+    P +N+++  L+    K+G +N A ++ K M+R  I  +   
Sbjct: 909  GRLEEAKELFEEMVDYGCRP-NNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKS 967

Query: 340  YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
            Y  L+   C+A   D A+   +KL         Q+ L +++ +YN MI  L  + +  +A
Sbjct: 968  YTSLVGCLCEAGRVDDALHYFEKL--------KQTGLYLDSIAYNLMIDGLGRSHRIEEA 1019

Query: 400  EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
               + ++  +G+  D   +N+LI      G  + A ++ + +   G+  +   Y  LI  
Sbjct: 1020 LTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRG 1079

Query: 459  YLRKGEPADAKTALDSMIEDGHSPASSLF 487
            Y   G    A      M+  G SP +  F
Sbjct: 1080 YSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 130/250 (52%), Gaps = 1/250 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            HN++   L  + + + AL  F +   +G F+    T+  +++ L + G+L  A+ +  +M
Sbjct: 863  HNIIIANLVKSNSLDKALDLF-YDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               G + +  ++ +LI  +GK G V  + ++F  M + G+   +KSY +L   +   GR 
Sbjct: 922  VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRV 981

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A  YF K+   G+      YN+M+ G   S ++E A+  +++M+SRGI+ D+ TYN++
Sbjct: 982  DDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I        +++A KL+ E++   +EP V +Y  +I+GY     +D A  ++  M     
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101

Query: 263  KPNAVTYTAL 272
             PN  T+  L
Sbjct: 1102 SPNTGTFAQL 1111



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 136/304 (44%), Gaps = 6/304 (1%)

Query: 3    ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVER--AGLFNHDRETH 59
            E AW    + K     P  F +NL+ +  HG     + L  F   E+        +  TH
Sbjct: 807  EMAWNLFTEMKNAGCAPDVFTYNLLLDA-HGKSGKINEL--FELYEQMICSSCKPNTITH 863

Query: 60   LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
              +I  L +   L+ A  +  D+           +  L++   K G ++E+ ++F+ M  
Sbjct: 864  NIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVD 923

Query: 120  LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
             G   +   Y+ L     + G    A   F +M+ EGI P   +Y  ++     + +++ 
Sbjct: 924  YGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDD 983

Query: 180  AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
            A+ +FE +K  G+ LD + YN MI+G  R  +++EA  L+ EM+ + I P + +Y ++I 
Sbjct: 984  ALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLIL 1043

Query: 240  GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
                    + A ++++E++   ++PN  TY AL+ G   +G       V + M+     P
Sbjct: 1044 NLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSP 1103

Query: 300  KDNS 303
               +
Sbjct: 1104 NTGT 1107



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 91/186 (48%), Gaps = 5/186 (2%)

Query: 23   HNLVYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
            +N +YN+L        +   A + F+ + R G+   D +++  ++  L   G+++ A   
Sbjct: 929  NNAIYNILINGFGKTGDVNTACELFKRMVREGI-RPDLKSYTSLVGCLCEAGRVDDALHY 987

Query: 79   LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
               + + G+  D   + ++I+  G+   ++E++ ++D M+  G+   + +Y++L   +  
Sbjct: 988  FEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGV 1047

Query: 139  RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             G    A + + ++   G+EP   TYN ++ G+ +S   ++A   ++ M   G S +  T
Sbjct: 1048 AGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGT 1107

Query: 199  YNTMIN 204
            +  + N
Sbjct: 1108 FAQLPN 1113


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 134/558 (24%), Positives = 247/558 (44%), Gaps = 22/558 (3%)

Query: 83  PKKGVQWD----EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           P  G+Q D      +  VL+E  G K  + E+V  +  M + G++  V +++ L K + R
Sbjct: 142 PLFGIQADTVVYNHLLNVLVE--GSKMKLLETV--YSEMGERGIKPDVVTFNTLMKALCR 197

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             +   A     +M S G+ P   T+  ++ GF     ++ A+R    M   G S   VT
Sbjct: 198 AHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVT 257

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
            N +INGY +  ++++A     +      EP  I+Y T + G         AL++ D M 
Sbjct: 258 VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV 317

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
                P+  TY  ++  LC  G++ E + +L +MVER   P D + F  L+   C    L
Sbjct: 318 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLP-DITTFNTLIVALCSGNRL 376

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A D+ + +    +  +   + ILI   CK      A++L +++          S    
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM--------KSSGCTP 428

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
           +  +YN +I +LC  G+ GKA    +++   G     V +N +I G  K+   + A E+ 
Sbjct: 429 DEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF 488

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M  +G+ R+A  +  LI+   +     DA   +  MI +G  P +  + S++    + 
Sbjct: 489 DQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQ 548

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--SVPN-F 554
           G ++ A+ ++++M   G + ++     ++  L   G  + AL  +  M   G  + P  +
Sbjct: 549 GDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAY 608

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL-NAYSILFKIM 613
           + ++  L  +  T  A+ L           D  +Y+ V   L   G ++  A+  L +++
Sbjct: 609 NPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMV 668

Query: 614 EKGGVTDWKSSDKLIAGL 631
           +KG + ++ S   L  GL
Sbjct: 669 DKGFIPEFSSFRMLAEGL 686



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/575 (22%), Positives = 254/575 (44%), Gaps = 48/575 (8%)

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL----GVERSVKSYDA 131
           + ++ +M ++G Q    +    +ESY ++ +  ++V +  ++ QL    G++     Y+ 
Sbjct: 98  KVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDL--VLNQLDPLFGIQADTVVYNH 155

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L  +++   +  + +  +++M   GI+P   T+N ++     + ++ TA+   E+M S G
Sbjct: 156 LLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSG 215

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           ++ D  T+ T++ G+     +  A ++ A M E    PT ++   +I GY  + R +DAL
Sbjct: 216 VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
               +  +   +P+ +TY   + GLC  G +    KV+  MV+    P D   +  ++  
Sbjct: 276 GYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP-DVFTYNIVVNC 334

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK+G L  A  +L  M+      +   +  LI   C     + A+ L      +++ L+
Sbjct: 335 LCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDL-----ARQVTLK 389

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNP 430
               L  +  ++N +I  LC  G    A   F ++   G   D V +N LI      G  
Sbjct: 390 ---GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKL 446

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
             A +++K M   G PR    Y  +I+   +K    +A+   D M   G S  +  F ++
Sbjct: 447 GKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 506

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           ++ L +D R+  A++++  M+ +G++ N      IL     +G +++A   +  M  +G 
Sbjct: 507 IDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANG- 565

Query: 551 VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              F+                            +D+ +Y  +++ L  AG+T  A  +L 
Sbjct: 566 ---FE----------------------------VDVVTYGTLINGLCKAGRTQVALKLLR 594

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            +  KG     K+ + +I  L +  NT+ A  L R
Sbjct: 595 GMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFR 629



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/538 (23%), Positives = 235/538 (43%), Gaps = 46/538 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +++ L R  ++  A  +L +M   GV  DE  F  L++ + ++G ++ ++++ 
Sbjct: 184 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVK 243

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M ++G   +  + + L     + GR   A  Y  + ++ G EP + TYN  + G   +
Sbjct: 244 ARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQN 303

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A++  + M   G   DV TYN ++N   +  +++EA+ +  +M E+   P + ++
Sbjct: 304 GHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTF 363

Query: 235 TTMIKGYVAVERADDAL-----------------------------------RIFDEMKS 259
            T+I    +  R ++AL                                   R+F+EMKS
Sbjct: 364 NTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKS 423

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               P+ VTY  L+  LC  GK+ +   +L+EM E    P+    +  ++   CK   + 
Sbjct: 424 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM-ESAGCPRSTVTYNTIIDGLCKKMRIE 482

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A +V   M    I   A  +  LI+  CK +  D A +L+ +++ +   L+P +     
Sbjct: 483 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG--LQPNNI---- 536

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +YN ++ H C  G   KA    + +   G  +D V +  LI G  K G    A ++++
Sbjct: 537 --TYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLR 594

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE-D 497
            M  +G+     AY  +I+S  R+    DA      M E G  P +  ++ V   L    
Sbjct: 595 GMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGG 654

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
           G ++ A   +  MV+KG          + E LL  G  +  +  I+++++   + + D
Sbjct: 655 GSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDSD 712



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 203/434 (46%), Gaps = 22/434 (5%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL + +  E A  F  D+ T+   +  L + G + HA  ++  M ++G   D   + +
Sbjct: 272 EDALGYIQQ-EIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNI 330

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++    K G ++E+  I + M + G    + +++ L   +    R   A     ++  +G
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P  +T+N+++         + A+R FE+MKS G + D VTYNT+I+      K+ +A 
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKAL 450

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L  EM+      + ++Y T+I G     R ++A  +FD+M    +  NA+T+  L+ GL
Sbjct: 451 DLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 510

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   ++ +  +++ +M+   + P +N  +  +L   CK G +  AAD+L+ M       +
Sbjct: 511 CKDKRIDDANQLISQMISEGLQP-NNITYNSILTHYCKQGDIKKAADILQTMTANGFEVD 569

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              YG LI   CKA     A+KLL  +  K +   P+        +YNP+IQ L     T
Sbjct: 570 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPK--------AYNPVIQSLFRRNNT 621

Query: 397 GKAEIFFRQLMKKGVLDP-------VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
             A   FR++ + G  +P       + F  L RG    G+   AF+ +  M  +G   + 
Sbjct: 622 RDAMNLFREMTEVG--EPPDAFTYKIVFRGLCRGG---GSIREAFDFLLEMVDKGFIPEF 676

Query: 450 DAYICLIESYLRKG 463
            ++  L E  L  G
Sbjct: 677 SSFRMLAEGLLNLG 690


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 137/574 (23%), Positives = 261/574 (45%), Gaps = 51/574 (8%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G  + A  ++ +M  KG++ +E  + +LI S  K+G++ +++ + D M++ GV  +V  Y
Sbjct: 351 GMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPY 410

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           ++L     ++    MA  + ++M+  G+ P   +Y+ ++ G      L  A+     M  
Sbjct: 411 NSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAE 470

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +G++ +  T+  +ING+ + KKMDEA +LF +M E N+EP  +++  +I+GY  V     
Sbjct: 471 KGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRK 530

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A +++D+M    + P+  TY +L+ GLC      + ++ + ++ E      +      LL
Sbjct: 531 AFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL-ENNCSVLNKFSLTALL 589

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C+ G L                TEA H    + N    EM     KL   L+   II
Sbjct: 590 HGFCREGRL----------------TEAYH----VWN----EMAMWGGKL--DLISFTII 623

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
           +            Y  + QH      + K+ + FR++ +KGV  D V    +I  +SKEG
Sbjct: 624 V------------YAALKQH-----DSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEG 666

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           N   A      M   G   +   Y  L+ +  +    + A+     M+     P S  F 
Sbjct: 667 NMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFN 726

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
             ++    +G ++TA  +  +M++ G   N+  V  +++     G ++EA+  I    ++
Sbjct: 727 CFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTEN 785

Query: 549 GSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
           G  P+   + +++  L +KG    A++L +  L +    D+ +Y  ++      G++   
Sbjct: 786 GFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKC 845

Query: 606 YSILFKIMEKGGVTDWKSSDKLIAG--LNQEGNT 637
             I   +++KG   +W +   L  G  L  +GNT
Sbjct: 846 LGIYIDMVKKGVQPNWHTHRALFVGTSLMSKGNT 879



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/589 (22%), Positives = 253/589 (42%), Gaps = 12/589 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   ++    R  +L+ A  +  DM + G    E     +++   KKG V+E+ ++ 
Sbjct: 266 DEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLA 325

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             + +L +  ++ +Y+AL   + + G +  A R  N+M  +G+EP   TY +++      
Sbjct: 326 CQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKR 385

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             ++ A+   + M+ +G+ + V  YN++IN   +   +D A    +EM E  + P   SY
Sbjct: 386 GMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASY 445

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +I G         A+ +  +M    V  N  T+TAL+ G C A KM E  ++  +M E
Sbjct: 446 SPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTE 505

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P +   F  ++   C  G +  A  +   M+   +  +   Y  LI   C  +   
Sbjct: 506 SNLEPNE-VTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGAS 564

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL-MKKGVLD 413
           +A + +  L     +L           S   ++   C  G+  +A   + ++ M  G LD
Sbjct: 565 KAKEFVADLENNCSVL--------NKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLD 616

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            ++F  ++    K+ + + +  + + M  +GV  D   + C+I  Y ++G    A    D
Sbjct: 617 LISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWD 676

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            MI DGH P +  + +++ +L +   + +A  + K M+      N       L+     G
Sbjct: 677 EMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEG 736

Query: 534 HVEEALGRIDLMMQS--GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           ++E A      M+Q    ++ + ++L+    + G+   A+ L+          D  SY  
Sbjct: 737 NLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYST 796

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           V+  L   G    A  +  +++ KG   D  + + LI   N  G + + 
Sbjct: 797 VIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKC 845



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 135/596 (22%), Positives = 244/596 (40%), Gaps = 15/596 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +   I     V  L+ A+ ++  M  +G +     + VLI    K   V+E+V + 
Sbjct: 196 DEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVK 255

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M   GV     +   L     R     MA      M   G  P+    + ML G    
Sbjct: 256 NSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKK 315

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            ++E A R    +    +  ++  YN ++N   +     EA++L  EM +K +EP  ++Y
Sbjct: 316 GRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTY 375

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I         DDAL + D M+   V+     Y +L+   C    +      L EMVE
Sbjct: 376 AILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVE 435

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P   S    + G+ C+ G L+ A ++ + M    +      +  LI  FCKA+  D
Sbjct: 436 IGLTPNAASYSPVIAGL-CRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMD 494

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A +L +K+ E        S L+    ++N +I+  C  G   KA   + Q+M +G+  D
Sbjct: 495 EASRLFNKMTE--------SNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPD 546

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              + +LI G         A E V  +       +  +   L+  + R+G   +A    +
Sbjct: 547 NYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWN 606

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M   G       F  ++ +  +    + +  + + M EKGV+ +      ++      G
Sbjct: 607 EMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEG 666

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
           ++ +AL   D M+  G +PN   + +L++ L +     +A  L    L    + +  ++ 
Sbjct: 667 NMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFN 726

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSR 645
             LD     G    A  + F +++ G + +  S + LI G  + G  ++A D++SR
Sbjct: 727 CFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISR 781



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 184/428 (42%), Gaps = 12/428 (2%)

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +FD M   GV      Y A  +          AK    +M  EG + +   YNV+++G  
Sbjct: 184 LFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLC 243

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
            + ++  A+     M +RG++ D VT  T++ G+ R +++D A ++  +M      P+  
Sbjct: 244 KNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEA 303

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           + + M+ G     R ++A R+  ++    + PN   Y ALL  +C  G   E  +++ EM
Sbjct: 304 NCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEM 363

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
            ++ + P +   +  L+   CK G ++ A  +L  M    +      Y  LI   CK + 
Sbjct: 364 SDKGLEPNE-VTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDD 422

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            D A+  L ++V  EI L P       A+SY+P+I  LC  G    A    R++ +KGV 
Sbjct: 423 LDMAMGFLSEMV--EIGLTPN------AASYSPVIAGLCRKGDLSGAVELHRKMAEKGVA 474

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            +   F  LI G  K    D A  +   M    +  +   +  +IE Y   G+   A   
Sbjct: 475 WNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQL 534

Query: 472 LDSMIEDGHSPASSLFRSVMESL-FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            D M+  G +P +  +RS++  L   DG  +    V        V     L A +L    
Sbjct: 535 YDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTA-LLHGFC 593

Query: 531 MRGHVEEA 538
             G + EA
Sbjct: 594 REGRLTEA 601



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 178/447 (39%), Gaps = 36/447 (8%)

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           I P   + + ++   V + +   A  +FD M    V  +   YTA +   C+   +   +
Sbjct: 158 IAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAK 217

Query: 287 KVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            ++  M +     K ++V +  L+   CK+  +  A DV  +M+   +  +      L+ 
Sbjct: 218 GLVARMQDE--GDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVY 275

Query: 346 NFCKAEMYDRAIK-------------------LLDKL-----VEKEIILRPQ-STLDMEA 380
            FC+ E  D A++                   +LD L     VE+   L  Q   L M  
Sbjct: 276 GFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVP 335

Query: 381 S--SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEI 436
           +  +YN ++ ++C NG   +A+    ++  KG L+P  V +  LI    K G  D A  +
Sbjct: 336 NIFAYNALLNNMCKNGMFSEADRLVNEMSDKG-LEPNEVTYAILIHSLCKRGMMDDALCM 394

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +  M  +GV      Y  LI    +K +   A   L  M+E G +P ++ +  V+  L  
Sbjct: 395 LDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCR 454

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G +  A  + + M EKGV  N      ++        ++EA    + M +S   PN   
Sbjct: 455 KGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVT 514

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           F++++      G    A +L D  + R    D  +Y  ++  L        A   +  + 
Sbjct: 515 FNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLE 574

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
               V +  S   L+ G  +EG   +A
Sbjct: 575 NNCSVLNKFSLTALLHGFCREGRLTEA 601



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/198 (17%), Positives = 85/198 (42%), Gaps = 1/198 (0%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L +   L+ A  +  +M       +   F   ++ +  +G ++ +  ++  M
Sbjct: 689 TYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAM 748

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            Q G   ++ S + L K   + G+   A    ++    G  P   +Y+ ++        +
Sbjct: 749 LQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDI 807

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             AI  + +M  +G+  D+V YN +I   N   + D+   ++ +M +K ++P   ++  +
Sbjct: 808 NEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRAL 867

Query: 238 IKGYVAVERADDALRIFD 255
             G   + + +  + I D
Sbjct: 868 FVGTSLMSKGNTLMLIPD 885


>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
 gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 219/456 (48%), Gaps = 32/456 (7%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFN----HDRETH 59
           + W  RL  K            V +++   +N + ALQ F   + AG F+    H+ ET+
Sbjct: 93  KPWPQRLSPK-----------RVVSMISRQQNLDLALQIF---DHAGKFHRNFAHNYETY 138

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
           L MIE L +         ++  + K  ++  E++F  +I +YG  G  + +++ F  +  
Sbjct: 139 LAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPS 198

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLE 178
            G++ SV+S++ L   +++  R+ +    F     + GI P   T N+++        ++
Sbjct: 199 FGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDID 258

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            AIR  E+M + G   +VVTY T++ GY     M  A ++F E+ ++   P   +YT ++
Sbjct: 259 AAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILM 318

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE-RYI 297
            GY    R  DA+++ DEM+   V+PN VTY  ++   C   K  EV  +L +M+E +YI
Sbjct: 319 DGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           P   +++  +++ + C+ G +  A ++ K +++ +   +      LI   CK      A 
Sbjct: 379 P--SSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEAR 436

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVA 416
           KL D+  +  I     STL     +YN +I  +C  G+  +A   +  +++KG V +   
Sbjct: 437 KLFDEFEKGSI----PSTL-----TYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFT 487

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           +N LI+G  K GN      +++ M   G   +   Y
Sbjct: 488 YNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 163/353 (46%), Gaps = 16/353 (4%)

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK-NI 227
           +GF    KL  AIR F  + S G+   V ++NT++N   + K+ D    +F   ++K  I
Sbjct: 180 YGFAGRPKL--AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGI 237

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P V +   ++K        D A+R+ +EM +    PN VTYT +L G    G MV  ++
Sbjct: 238 VPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARR 297

Query: 288 VLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           V  E+++R ++P  D + +  L+   CK G    A  V+  M    +      YG++IE 
Sbjct: 298 VFGEILDRGWVP--DPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEA 355

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
           +CK +     + LLD ++EK+ I  P S L         +I  LC  G+   A   +++L
Sbjct: 356 YCKEKKSGEVLNLLDDMLEKKYI--PSSALCCR------VIDMLCEEGKVEVACELWKKL 407

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           +KK    D    + LI    KEG    A ++     +  +P     Y  LI      GE 
Sbjct: 408 LKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTL-TYNALIAGMCEGGEL 466

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
            +A    D+M+E G  P +  +  +++   + G  +   RVM+ M++ G   N
Sbjct: 467 PEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/450 (20%), Positives = 194/450 (43%), Gaps = 50/450 (11%)

Query: 177 LETAIRFFEDMKS--RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           L+ A++ F+      R  + +  TY  MI   ++ +  +  E L +++ +  I+     +
Sbjct: 114 LDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLF 173

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I+ Y    R   A+R F  + SF ++P+  ++  LL  L        VQ    ++V 
Sbjct: 174 ITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTL--------VQNKRFDLVH 225

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
                        L+   C+               +  I        IL++  CK    D
Sbjct: 226 -------------LMFKNCRK--------------KFGIVPNVFTCNILVKALCKKNDID 258

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLD 413
            AI++L+++        P         +Y  ++      G    A   F +++ +G V D
Sbjct: 259 AAIRVLEEM--------PAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPD 310

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           P  +  L+ G+ K+G    A +++  M    V  +   Y  +IE+Y ++ +  +    LD
Sbjct: 311 PTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLD 370

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+E  + P+S+L   V++ L E+G+V+ A  + K +++K    +  + + ++  L   G
Sbjct: 371 DMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEG 430

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            V EA    D   + GS+P+   +++L++ + E G+   A +L D  + + C+ +  +Y 
Sbjct: 431 KVWEARKLFD-EFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYN 489

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
            ++      G       ++ ++++ G + +
Sbjct: 490 MLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 124/284 (43%), Gaps = 6/284 (2%)

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NN 419
           KL  +  +  P   L     S+N ++  L  N +     + F+   KK  + P  F  N 
Sbjct: 187 KLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNI 246

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L++   K+ + D+A  +++ M   G   +   Y  ++  Y+ KG+   A+     +++ G
Sbjct: 247 LVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRG 306

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P  + +  +M+   + GR   A +VM  M E  V+ N      I+EA        E L
Sbjct: 307 WVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVL 366

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             +D M++   +P+      ++ +L E+GK   A +L    L ++C  D A    ++  L
Sbjct: 367 NLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWL 426

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              GK   A   LF   EKG +    + + LIAG+ + G   +A
Sbjct: 427 CKEGKVWEARK-LFDEFEKGSIPSTLTYNALIAGMCEGGELPEA 469


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 139/606 (22%), Positives = 270/606 (44%), Gaps = 15/606 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL  F  +   G+F      ++ +  ++ R  +     C    +  KGV  D  +F   I
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLV-RATEFQKC-CEAFHVVCKGVSPDVYLFTTAI 259

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            ++ K G V+E++++F  M++ GV  +V +Y+ +   +   GRY  A  +  KM+  G+E
Sbjct: 260 NAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVE 319

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT  TY++++ G   + ++  A    ++M  +G   +V+ YN +I+       +++A ++
Sbjct: 320 PTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEI 379

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              M  K +  T  +Y T+IKGY    +AD A R+  EM S     N  ++T+++  LC 
Sbjct: 380 KDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCS 439

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
                   + + EM+ R + P    +   L+   CK G  + A ++    +      +  
Sbjct: 440 HHMFDSALRFVGEMLLRNMSP-GGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTK 498

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
               L+   C+A   +   +     ++KEI+ R      M+  SYN +I   C N +  +
Sbjct: 499 TSNALLHGLCEAGKLEEGFR-----IQKEILGR---GFVMDRVSYNTLISGCCGNKKLDE 550

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A +F  +++KKG+  D   ++ LIRG       + A +      R G+  D   Y  +I+
Sbjct: 551 AFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMID 610

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
              +     + +   D M+ +   P + ++  ++ +    GR+  A  + + M  KG+  
Sbjct: 611 GCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISP 670

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           N      +++ + +   VEEA   ++ M   G  PN   + +L+    + G+ +    LL
Sbjct: 671 NSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 730

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                ++   +  +Y  ++      G    A  +L ++ EKG V D  +  + I G  ++
Sbjct: 731 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQ 790

Query: 635 GNTKQA 640
           G   QA
Sbjct: 791 GGVLQA 796



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 231/516 (44%), Gaps = 22/516 (4%)

Query: 70  GKLNHARCILLD-MPKKGVQWDED----MFEVLIESYG---KKGIVQESVKIFDIMKQLG 121
           G L  +R  + D M    + +DE+    M ++LIE Y    K+     ++ +F ++   G
Sbjct: 154 GGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKG 213

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  S  + + L   ++R   +      F+ ++ +G+ P  + +   +  F    K+E AI
Sbjct: 214 MFPSKTTCNILLTSLVRATEFQKCCEAFH-VVCKGVSPDVYLFTTAINAFCKGGKVEEAI 272

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F  M+  G+  +VVTYNT+I+G     + DEA     +M E+ +EPT+I+Y+ ++KG 
Sbjct: 273 ELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGL 332

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +R  DA  +  EM      PN + Y  L+  L +AG + +  ++   MV + +    
Sbjct: 333 TKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLT- 391

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +S +  L+   CKSG  + A  +LK M+ +      G +  +I   C   M+D A++ + 
Sbjct: 392 SSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVG 451

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
                E++LR  S           +I  LC +G+  KA   + + + KG L D    N L
Sbjct: 452 -----EMLLRNMSP---GGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNAL 503

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G  + G  +  F I K +  RG   D  +Y  LI       +  +A   +D M++ G 
Sbjct: 504 LHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGL 563

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P +  +  ++  L    +V+ A +        G+  ++   + +++        EE   
Sbjct: 564 KPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQK 623

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
             D MM +   PN   ++ L+      G+   A++L
Sbjct: 624 LFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALEL 659



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 109/484 (22%), Positives = 216/484 (44%), Gaps = 12/484 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +++ L +  ++  A C+L +M +KG   +  ++  LI+S  + G + ++++I D+M
Sbjct: 324 TYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLM 383

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+  +  +Y+ L K   + G+  +A+R   +MLS G    + ++  ++         
Sbjct: 384 VSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMF 443

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           ++A+RF  +M  R +S       T+I+G  +  K  +A +L+ +   K       +   +
Sbjct: 444 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNAL 503

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G     + ++  RI  E+       + V+Y  L+ G C   K+ E    + EMV++ +
Sbjct: 504 LHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGL 563

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P DN  +  L+        +  A        R  +  +   Y ++I+  CKAE  +   
Sbjct: 564 KP-DNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQ 622

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--V 415
           KL D+++     L+P + +      YN +I   C +G+   A +  R+ MK   + P   
Sbjct: 623 KLFDEMMSNN--LQPNTVV------YNHLIGAYCRSGRLSMA-LELREDMKHKGISPNSA 673

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            + +LI+G S     + A  +++ M   G+  +   Y  LI+ Y + G+    +  L  M
Sbjct: 674 TYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 733

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                 P    +  ++     DG V  ASR++  M EKG+  +     + +   L +G V
Sbjct: 734 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGV 793

Query: 536 EEAL 539
            +A 
Sbjct: 794 LQAF 797



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 154/319 (48%), Gaps = 4/319 (1%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           HG K+S+    + +++ +   F  D +T   ++  L   GKL     I  ++  +G   D
Sbjct: 475 HG-KHSKAVELWLKFLNKG--FLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMD 531

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
              +  LI        + E+    D M + G++    +Y  L + +L   +   A +++ 
Sbjct: 532 RVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWG 591

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
                G+ P  +TY+VM+ G   + + E   + F++M S  +  + V YN +I  Y R  
Sbjct: 592 DCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSG 651

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           ++  A +L  +MK K I P   +YT++IKG   + R ++A  + +EM+   ++PN   YT
Sbjct: 652 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYT 711

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           AL+ G    G+MV+V+ +LREM  + + P +   +  ++G   + G++  A+ +L  M  
Sbjct: 712 ALIDGYGKLGQMVKVECLLREMHSKNVHP-NKITYTVMIGGYARDGNVTEASRLLHEMRE 770

Query: 331 LSIPTEAGHYGILIENFCK 349
             I  ++  Y   I  + K
Sbjct: 771 KGIVPDSITYKEFIYGYLK 789



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 4/282 (1%)

Query: 9   RLQNKI--RALV-PQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           R+Q +I  R  V  +  +N + +   G K  + A  F   + + GL   D  T+  +I  
Sbjct: 518 RIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGL-KPDNYTYSILIRG 576

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L  + K+  A     D  + G+  D   + V+I+   K    +E  K+FD M    ++ +
Sbjct: 577 LLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPN 636

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
              Y+ L     R GR  MA      M  +GI P   TY  ++ G  +  ++E A    E
Sbjct: 637 TVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLE 696

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+  G+  +V  Y  +I+GY +  +M + E L  EM  KN+ P  I+YT MI GY    
Sbjct: 697 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 756

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
              +A R+  EM+   + P+++TY   + G    G +++  K
Sbjct: 757 NVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFK 798


>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g13040, mitochondrial; Flags: Precursor
 gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
 gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 123/527 (23%), Positives = 234/527 (44%), Gaps = 41/527 (7%)

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           K G++  +V++FD M+          Y+    +++R  R+ +A+  +  M   G      
Sbjct: 21  KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPF 80

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           TY+  + G     K +       DM++ G   D+  +N  ++   R  K+  A + F  M
Sbjct: 81  TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
            ++  EP V+SYT +I G     +  DA+ I++ M    V P+     AL+ GLC A K+
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
               +++ E ++         V+  L+   CK+G +  A  +   M ++    +   Y +
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           L+  +    M  RA  ++ ++V        +S + ++A SYN +++  C      K   F
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMV--------RSGIQLDAYSYNQLLKRHCRVSHPDKCYNF 312

Query: 403 F-RQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
             +++  +G  D V+++ LI    +  N   A+ + + M ++G+  +   Y  LI+++LR
Sbjct: 313 MVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
           +G  + AK  LD M E G SP    + ++++ L + G V  A  V   M+E  +  +   
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPD--- 429

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
                                          +++SL+S L   G+   A+KL +   G++
Sbjct: 430 -----------------------------AISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
           C  D  +++ ++  L+   K   AY +  ++M+KG   D   SD LI
Sbjct: 461 CCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 113/509 (22%), Positives = 202/509 (39%), Gaps = 80/509 (15%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A + F++M           YN  +       + E A   + DMK  G SL   TY+  I+
Sbjct: 28  AVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFIS 87

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G  + KK D  + L ++M+     P + ++   +       +   A++ F  M     +P
Sbjct: 88  GLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREP 147

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + V+YT L+ GL  AGK+ +  ++   M+   + P DN     L+   C +  ++ A ++
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSP-DNKACAALVVGLCHARKVDLAYEM 206

Query: 325 LKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +   I+ + +      Y  LI  FCKA   ++A  L  K    +I   P      +  +Y
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL--KSYMSKIGCEP------DLVTY 258

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE-IVKIMG 441
           N ++ +   N    +AE    ++++ G+ LD  ++N L++ H +  +PD  +  +VK M 
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEME 318

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            RG   D  +Y  LIE++ R                                       +
Sbjct: 319 PRGFC-DVVSYSTLIETFCRASN-----------------------------------TR 342

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
            A R+ + M +KG+  N+     +++A L  G+   A   +D M + G  P         
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP--------- 393

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
                                  D   Y  +LD L  +G    AY +   ++E     D 
Sbjct: 394 -----------------------DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430

Query: 622 KSSDKLIAGLNQEGNTKQADILSRMIRGE 650
            S + LI+GL + G   +A  L   ++G+
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGK 459



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 139/284 (48%), Gaps = 13/284 (4%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL-----ILRRGRYMMAKR 147
           ++  LI  + K G ++++  +   M ++G E  + +Y+ L        +L+R   +MA+ 
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE- 280

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF-EDMKSRGISLDVVTYNTMINGY 206
               M+  GI+   ++YN +L         +    F  ++M+ RG   DVV+Y+T+I  +
Sbjct: 281 ----MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETF 335

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R     +A +LF EM++K +   V++YT++IK ++    +  A ++ D+M    + P+ 
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           + YT +L  LC +G + +   V  +M+E  I P D   +  L+   C+SG +  A  + +
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP-DAISYNSLISGLCRSGRVTEAIKLFE 454

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
            M       +   +  +I    + +    A K+ D++++K   L
Sbjct: 455 DMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL 498



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 83/171 (48%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  ++  +IE   R      A  +  +M +KG+  +   +  LI+++ ++G    + K+ 
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M +LG+      Y  +   + + G    A   FN M+   I P   +YN ++ G   S
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
            ++  AI+ FEDMK +    D +T+  +I G  R KK+  A K++ +M +K
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDK 494



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           A N+  A + F  + + G+   +  T+  +I+   R G  + A+ +L  M + G+  D  
Sbjct: 338 ASNTRKAYRLFEEMRQKGMV-MNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            +  +++   K G V ++  +F+ M +  +     SY++L   + R GR   A + F  M
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
             +   P   T+  ++ G     KL  A + ++ M  +G +LD    +T+I
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 253/549 (46%), Gaps = 21/549 (3%)

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
           ++L+    K  +++E+V++++ M++ G   S+ S   LF  ++   +++     F ++ +
Sbjct: 110 DMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIEN 169

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G       Y   +        L+  + F + M+ RG+  +V  YN +I G  R K++ +
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           AEK+F EM   N+  ++++Y T+I GY  V   D A ++ + MK   V PN +T+ +LL 
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289

Query: 275 GLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLG--VQCKSGHLNAAADVLKAMIRL 331
           GLC   KM E + +L+EM V  ++P  D   +  L    ++C  G  N A ++ +     
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMP--DGYTYSILFDGLLRCDDG--NGAMELYEQATEK 345

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            I        IL+   CK    ++A ++L K  E  ++         +   YN  +   C
Sbjct: 346 GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLV--------ADEVIYNTFVNGYC 397

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G   KA +   ++   G+  + + FN+LI         D A E VK M  +GV    +
Sbjct: 398 RIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVE 457

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  LI+ Y +          L+ M E G  P    + S++  L +DG++  A  V++ M
Sbjct: 458 TYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDM 517

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKT 567
           + +GV  N  +   +++   M G V++AL   D MM+S   P    ++ L+  L +KGK 
Sbjct: 518 ICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKL 577

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDK 626
             A   L          D+ +Y  ++     AG        L++ M+  G+    ++   
Sbjct: 578 TEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLG-LYETMKNLGIKPTVRTYHP 636

Query: 627 LIAGLNQEG 635
           LI+G ++EG
Sbjct: 637 LISGCSKEG 645



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 239/521 (45%), Gaps = 19/521 (3%)

Query: 13  KIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           ++   +P  + ++++++ L    +   A++ +      G+  ++    + ++  L + GK
Sbjct: 308 EVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSI-LLNGLCKQGK 366

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           +  A  IL    + G+  DE ++   +  Y + G + +++   + M+  G+  +  ++++
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNS 426

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L            A+ +  KM  +G+ P+  TYN ++ G+      +   +  E M+  G
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG 486

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           +  +VV+Y ++IN   +  K+ EAE +  +M  + + P    Y  +I G   V +  DAL
Sbjct: 487 VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDAL 546

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R FDEM   ++ P  VTY  L+ GLC  GK+ E +  L ++      P D   +  L+  
Sbjct: 547 RFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSP-DVITYNSLISG 605

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
              +G+++    + + M  L I      Y  LI   C  E     I+L++KL  + +   
Sbjct: 606 YANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKE----GIELVEKLYNEML--- 657

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNP 430
            Q  L  +   YN MI      G T KA    + ++ +G+  D + +N+LI GH +EG  
Sbjct: 658 -QMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKL 716

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
            +  ++V  M  + +   AD Y  L++ +    + + A      M+E+   P +S+   +
Sbjct: 717 SNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNEL 776

Query: 491 MESLFEDGRVQTASRVMKSMVEKGV------KENLDLVAKI 525
              L ++GR+Q    +   M  KG+      KE +  VAK+
Sbjct: 777 TAGLEQEGRLQEVQVICSEMNVKGIINHWPSKEEISAVAKM 817



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 130/580 (22%), Positives = 271/580 (46%), Gaps = 15/580 (2%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           + +++   G + D  M+   I++  K   ++  ++  D M++ GV  +V  Y+ L   + 
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R  R   A++ F++M +  +  +  TYN ++ G+    +L+ A +  E MK + ++ +++
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           T+N++++G  + +KM EA  L  EM+     P   +Y+ +  G +  +  + A+ ++++ 
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               ++ N  T + LL GLC  GK+ + +++L++  E  +   D  ++   +   C+ G 
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVA-DEVIYNTFVNGYCRIGD 401

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +N A   ++ M    +   +  +  LI+ FC  +  D+A + + K+ EK +      T  
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV------TPS 455

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
           +E  +YN +I          +      Q+ + GV  + V++ +LI    K+G    A  +
Sbjct: 456 VE--TYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIV 513

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M  RGV  +A  Y  LI+     G+  DA    D M+    SP    +  +++ L +
Sbjct: 514 LRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCK 573

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPN 553
            G++  A   +  +   G   ++     ++      G+V + LG  + M   G   +V  
Sbjct: 574 KGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRT 633

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +  L+S  S++G  +   KL +  L  + + D   Y  ++      G T  AYS+   ++
Sbjct: 634 YHPLISGCSKEGIELVE-KLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGML 692

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQ-ADILSRMIRGEMS 652
           ++G   D  + + LI G  +EG      D+++ M   E++
Sbjct: 693 DQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELA 732



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 149/697 (21%), Positives = 286/697 (41%), Gaps = 122/697 (17%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
            +  F  +E +G F  D   + K I+   ++  L      L  M K+GV+ +  ++ VLI
Sbjct: 160 VVDLFMEIENSG-FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSY-------------DALFKLILRRGRYMMA 145
               ++  ++++ K+FD M  + +  S+ +Y             DA FK+  R     +A
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 146 KRY--FNKMLS--------------------EGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
                FN +LS                     G  P  +TY+++  G         A+  
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           +E    +GI ++  T + ++NG  +  K+++AE++  +  E  +    + Y T + GY  
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
           +   + A+   + M+SF ++PN++T+ +L+   CD  +M + ++ +++M E+ + P    
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP---- 454

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
                                       S+ T    Y  LI+ + K   +DR  ++L+++
Sbjct: 455 ----------------------------SVET----YNTLIDGYGKLCTFDRCFQILEQM 482

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
             +EI ++P         SY  +I  LC +G+  +AEI  R ++ +GVL +   +N LI 
Sbjct: 483 --EEIGVKPN------VVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLID 534

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G    G    A      M R  +      Y  LI+   +KG+  +A+  L  +   GHSP
Sbjct: 535 GSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSP 594

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               + S++      G V     + ++M   G+K  +     ++      G +E      
Sbjct: 595 DVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLY 653

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
           + M+Q   +P+   +++++   +E G T  A  L    L +    D  +Y  ++      
Sbjct: 654 NEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFRE 713

Query: 600 GKTLN------------------AYSILFK-----------------IMEKGGVTDWKSS 624
           GK  N                   Y IL K                 ++E   + +    
Sbjct: 714 GKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASIC 773

Query: 625 DKLIAGLNQEGNTKQADIL-SRM-IRGEMSRGSQKEK 659
           ++L AGL QEG  ++  ++ S M ++G ++    KE+
Sbjct: 774 NELTAGLEQEGRLQEVQVICSEMNVKGIINHWPSKEE 810



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 71/331 (21%), Positives = 126/331 (38%), Gaps = 20/331 (6%)

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
            ++ +D+       SIP       +L+   CK++M   A++L +        +R    L 
Sbjct: 87  FSSPSDLFSCFSACSIPLRITLSDMLLSVCCKSKMLREAVELYE-------FMRRDGKLP 139

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
              S        + +  Q  K    F ++   G   D   +   I+   K  N     E 
Sbjct: 140 SLVSLSLLFSCLV-NEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEF 198

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +  M +RGV  +   Y  LI    R+    DA+   D M       +   + ++++   +
Sbjct: 199 LDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCK 258

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G +  A ++ + M EK V  N+     +L  L     ++EA   +  M  +G +P+   
Sbjct: 259 VGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYT 318

Query: 554 ----FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
               FD LL      G    A++L +    +   I+  +   +L+ L   GK   A  IL
Sbjct: 319 YSILFDGLLRCDDGNG----AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEIL 374

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            K  E G V D    +  + G  + G+  +A
Sbjct: 375 KKFTENGLVADEVIYNTFVNGYCRIGDMNKA 405


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 132/588 (22%), Positives = 259/588 (44%), Gaps = 20/588 (3%)

Query: 56  RETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD 115
           R+ + ++I  LG  G  +  + ++ +M ++G +    + +  I SY +  +  ++   FD
Sbjct: 90  RDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDA---FD 146

Query: 116 IMKQ----LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++       GV+ + + Y+ L  ++    +  + +  + +M S+GIEP   T+N ++   
Sbjct: 147 LVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDAL 206

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + +  TA+   E+M S  ++ D  T+ T++ G+     ++ A +L A M E    PT 
Sbjct: 207 CRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTS 266

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++   +I GY  + R  DAL    +  +   +P+ VT++  + GLC  G +    KVL  
Sbjct: 267 VTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGL 326

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M++    P D   +  ++   C +G L  A  ++  M+      +   +  LI   C   
Sbjct: 327 MLQEGCEP-DVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             + A+ L  +L  K         L     ++N +I  LC  G    A   F ++   G 
Sbjct: 386 QLEEALDLARELTVK--------GLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGC 437

Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             D V +N LI      G    A +++K M   G P+    Y  +I+   ++    +A+ 
Sbjct: 438 TPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEE 497

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
             D M   G    +  F ++++ L    R+  A+ ++  M+ +G++ N      IL    
Sbjct: 498 VFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYC 557

Query: 531 MRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            +G++ +A   +  M  +G    V  + +L++ L +  +T AA+KLL     +       
Sbjct: 558 KQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPK 617

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
           +Y  V+ +L       +A S+  ++ E GG  D  +   +  GL + G
Sbjct: 618 AYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGG 665



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/530 (23%), Positives = 228/530 (43%), Gaps = 46/530 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I+ L R  +   A  +L +M    V  DE  F  L+E + ++G ++ ++++ 
Sbjct: 195 DVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLK 254

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M ++G   +  + + L     + GR   A  Y  + +++G EP R T++  + G   +
Sbjct: 255 ARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQN 314

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMIN----------------------------GY 206
             ++ A++    M   G   DV TY+T+IN                             +
Sbjct: 315 GHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTF 374

Query: 207 NRF-------KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N          +++EA  L  E+  K + P V ++  +I     V     A+R+F+EMKS
Sbjct: 375 NTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKS 434

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               P+ VTY  L+  LC +GK+ +   +L+EM E    P+    +  ++   CK   + 
Sbjct: 435 SGCTPDEVTYNILIDNLCSSGKLAKALDLLKEM-EVSGCPQSTVTYNTIIDGLCKRRRIE 493

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A +V   M    I   A  +  LI+  C AE  D A +L+D+++ +   L+P +     
Sbjct: 494 EAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEG--LQPNNV---- 547

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +YN ++ H C  G   KA    + +   G  +D V +  LI G  K     +A ++++
Sbjct: 548 --TYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLR 605

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE-D 497
            M  +G+     AY  +I+S  R     DA +    M E G  P +  ++ V   L    
Sbjct: 606 GMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGG 665

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
           G ++ A   +  M + G          + E LL  G  +  +  I+L+++
Sbjct: 666 GPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVE 715



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 188/429 (43%), Gaps = 47/429 (10%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           +HAL+    + + G    D  T+  +I  L   G+L  A+ I+  M   G   D   F  
Sbjct: 318 DHALKVLGLMLQEGC-EPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNT 376

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI +   +  ++E++ +   +   G+  +V +++ L   + + G   +A R F +M S G
Sbjct: 377 LIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P   TYN+++     S KL  A+   ++M+  G     VTYNT+I+G  + ++++EAE
Sbjct: 437 CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           ++F +M    I    I++ T+I G    ER DDA  + D+M S  ++PN VTY ++L   
Sbjct: 497 EVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHY 556

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C                                    K G+++ AAD+L+ M       +
Sbjct: 557 C------------------------------------KQGNISKAADILQTMTANGFEVD 580

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI   CKA     A+KLL  +  K +   P+        +YNP+IQ L      
Sbjct: 581 VVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPK--------AYNPVIQSLFRGNNG 632

Query: 397 GKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNP-DSAFEIVKIMGRRGVPRDADAYIC 454
             A   FR++ +  G  D   +  + RG  + G P   AF+ +  M   G   +  ++  
Sbjct: 633 RDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRM 692

Query: 455 LIESYLRKG 463
           L E  L  G
Sbjct: 693 LAEGLLNLG 701



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 200/463 (43%), Gaps = 20/463 (4%)

Query: 66  LGRVG-KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           LGRVG  L + +  + D    G + D   F   +    + G V  ++K+  +M Q G E 
Sbjct: 279 LGRVGDALGYIQQEIAD----GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEP 334

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
            V +Y  +   +   G    AK   N+M+  G  P   T+N ++       +LE A+   
Sbjct: 335 DVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLA 394

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            ++  +G+S +V T+N +IN   +      A +LF EMK     P  ++Y  +I    + 
Sbjct: 395 RELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSS 454

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            +   AL +  EM+      + VTY  ++ GLC   ++ E ++V  +M    I  ++   
Sbjct: 455 GKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGI-GRNAIT 513

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           F  L+   C +  ++ AA+++  MI   +      Y  ++ ++CK     +A  +L  + 
Sbjct: 514 FNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMT 573

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRG 423
                    +  +++  +Y  +I  LC   +T  A    R +  KG+   P A+N +I+ 
Sbjct: 574 --------ANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQS 625

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE---DGH 480
             +  N   A  + + M   G P DA  Y  +     R G P   K A D ++E   +G 
Sbjct: 626 LFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGP--IKEAFDFLVEMADNGF 683

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
            P  S FR + E L   G      R ++ +VEK      D+ A
Sbjct: 684 IPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKANFRESDISA 726


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 208/410 (50%), Gaps = 11/410 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
             ALQF   V   G F+ ++ ++  +I  L +VG+ + A  +L  +  K VQ +  M+  
Sbjct: 159 HQALQFHDKVVALG-FHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 217

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I+S  K  +V E+  ++  M   G+   V +Y+AL       G+   A   FNKM+ E 
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I P  +T+N+++ GF    +L+ A      M  +GI  DV TYN++++ Y   K++++A+
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +F  + ++ + P + SY+ MI G+  +++ D+A+ +F EM   ++ P+ VTY +L+ GL
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  GK+    K++ EM +R + P D   +  +L   CK+  ++ A  +L  M    I  +
Sbjct: 398 CKLGKISYALKLVDEMHDRGV-PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  L++  CK    + A  + + L+ K  IL        + + Y  MIQ  C +G  
Sbjct: 457 ICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYIL--------DVNIYTAMIQGFCSHGLF 508

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
            ++     ++ + G + + V +  +I     +   D A ++++ M  RG+
Sbjct: 509 DESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 219/458 (47%), Gaps = 13/458 (2%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+   +     L     + G+  ++     K+L  G EP   T   ++ G  L  ++  A
Sbjct: 102 GITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQA 161

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           ++F + + + G  L+ V+Y T+ING  +  +   A +L   +  K ++P V+ Y T+I  
Sbjct: 162 LQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 221

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              V+  ++A  ++ EM S  + P+ VTY AL+ G C  GKM +   +  +M+   I P 
Sbjct: 222 MCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINP- 280

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   F  L+   CK   L  A +VL  M++  I  +   Y  L++ +C  +  ++A  + 
Sbjct: 281 NVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIF 340

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + +         Q  ++    SY+ MI   C   +  +A   F+++    ++ D V +N+
Sbjct: 341 NTI--------SQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNS 392

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  K G    A ++V  M  RGVP D   Y  ++++  +  +   A   L  M ++G
Sbjct: 393 LIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    + ++++ L ++GR++ A  V + ++ KG   ++++   +++     G  +E+L
Sbjct: 453 IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESL 512

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
             +  M ++G +PN   ++ ++  L +K +   A KLL
Sbjct: 513 DLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLL 550



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 213/455 (46%), Gaps = 10/455 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I    ++G+   +  +L  + K G + +      LI+    KG + ++++  D +  LG
Sbjct: 113 LINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALG 172

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +  SY  L   + + G+   A +   ++  + ++P    YN ++        +  A 
Sbjct: 173 FHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 232

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             + +M S+GIS DVVTYN +I+G+    KM +A  LF +M  +NI P V ++  ++ G+
Sbjct: 233 DLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF 292

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R  +A  +   M    +KP+  TY +L+   C   ++ + + +   + +R + P  
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNI 352

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +S  + + G  CK   ++ A ++ K M   +I  +   Y  LI+  CK      A+KL+D
Sbjct: 353 HSYSIMIHGF-CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVD 411

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           ++ ++ +   P   +     +YN ++  LC N Q  KA     ++  +G+  D   +  L
Sbjct: 412 EMHDRGV---PHDKI-----TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTL 463

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G  K G  + A  + + +  +G   D + Y  +I+ +   G   ++   L  M E+G 
Sbjct: 464 VDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGC 523

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            P +  +  ++ SLF+      A ++++ M+ +G+
Sbjct: 524 IPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 111/508 (21%), Positives = 231/508 (45%), Gaps = 16/508 (3%)

Query: 149 FNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           FN++L +   +P+   +  +L     S    T +     M+  GI+ D+V  + +IN ++
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           +  +   +  + A++ +   EP VI+ TT+IKG     +   AL+  D++ +     N V
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           +Y  L+ GLC  G+     ++LR +  + + P +  ++  ++   CK   +N A D+   
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQP-NVVMYNTIIDSMCKVKLVNEAFDLYSE 237

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M+   I  +   Y  LI  FC       A  L +K++ + I        +    ++N ++
Sbjct: 238 MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENI--------NPNVYTFNILV 289

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
              C   +  +A+     +MK+G+  D   +N+L+  +      + A  I   + +RGV 
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN 349

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            +  +Y  +I  + +  +  +A      M  +   P    + S+++ L + G++  A ++
Sbjct: 350 PNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKL 409

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           +  M ++GV  +      IL+AL     V++A+  +  M   G  P+   + +L+  L +
Sbjct: 410 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+   A  + +  L +  I+D+  Y  ++    + G    +  +L K+ E G + +  +
Sbjct: 470 NGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVT 529

Query: 624 SDKLIAGL-NQEGNTKQADILSRMI-RG 649
            + +I  L +++ N K   +L  MI RG
Sbjct: 530 YEIIICSLFDKDENDKAEKLLREMITRG 557


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 190/396 (47%), Gaps = 10/396 (2%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +G Q ++  +  L+    K G  + ++K+  +++       V  Y+ +   + +      
Sbjct: 231 QGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNE 290

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  ++ +M S GI P   TY+ ++ GF L+ +L  A     +M  + I+ DV TY  +I+
Sbjct: 291 AYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILID 350

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              +  K+ EA+ L   M ++ ++P V++Y+T++ GY  V    +A +IF  M   +V P
Sbjct: 351 ALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNP 410

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           +  +Y  ++ GLC    + E   +LREM+ + + P +   +  L+   CKSG + +A D+
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVP-NTVTYNSLIDGLCKSGRITSALDL 469

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           +K +     P +   Y  L++  CK +  D+AI L  K+ E+ I  +P         +Y 
Sbjct: 470 MKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGI--QPNK------YTYT 521

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I  LC   +   A+  F+ ++ KG  +D   +N +I G  KEG  D A  +   M   
Sbjct: 522 ALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDN 581

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           G   DA  +  +I S   K E   A+  L  MI  G
Sbjct: 582 GCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 213/458 (46%), Gaps = 13/458 (2%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+E  + +   L       G+   +     K+L  G +P       ++ G  L  +++ +
Sbjct: 162 GIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKS 221

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           + F + + ++G  ++ V+Y T++NG  +  +   A KL   +++++  P V+ Y T+I G
Sbjct: 222 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDG 281

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +  ++A   + EM S  + P+ +TY+ L+ G C AG+++    +L EM  + I P 
Sbjct: 282 LCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINP- 340

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+   CK G L  A ++L  M +  +      Y  L++ +C       A ++ 
Sbjct: 341 DVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIF 400

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
             +V+ E+        +    SYN MI  LC      +A    R+++ K V+ + V +N+
Sbjct: 401 HAMVQTEV--------NPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNS 452

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  K G   SA +++K +  RG P D   Y  L++   +      A      M E G
Sbjct: 453 LIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    + ++++ L +  R++ A ++ + ++ KG   ++     ++  L   G ++EAL
Sbjct: 513 IQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEAL 572

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
                M  +G +P+   F+ ++  L EK +   A KLL
Sbjct: 573 AMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLL 610



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 220/491 (44%), Gaps = 48/491 (9%)

Query: 64  EILGRVGKLNH---ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +ILG + K+ H   A  +   M  KG++ D     +LI  +   G +  S  +   + +L
Sbjct: 137 KILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKL 196

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G + +      L K +  +G    +  + +K++++G +  + +Y  +L G     +   A
Sbjct: 197 GYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCA 256

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           I+    ++ R    DVV YNT+I+G  + K ++EA   + EM  + I P VI+Y+T+I G
Sbjct: 257 IKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICG 316

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +    +   A  + +EM   ++ P+  TYT L+  LC  GK+ E + +L  M +  + P 
Sbjct: 317 FCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKP- 375

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   +  L+   C  G ++ A  +  AM++  +      Y I+I   CK +  D A+ LL
Sbjct: 376 NVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLL 435

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNN 419
            +++ K ++  P +       +YN +I  LC +G+   A    ++L  +G   D + + +
Sbjct: 436 REMLHKNVV--PNTV------TYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTS 487

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY----------------LRKG 463
           L+ G  K  N D A  +   M  RG+  +   Y  LI+                  L KG
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKG 547

Query: 464 EPADAKT------------------ALDSMIED-GHSPASSLFRSVMESLFEDGRVQTAS 504
              D  T                  A+ S +ED G  P +  F  ++ SLFE      A 
Sbjct: 548 CCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAE 607

Query: 505 RVMKSMVEKGV 515
           +++  M+ KG+
Sbjct: 608 KLLHEMIAKGL 618



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 226/509 (44%), Gaps = 16/509 (3%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   FN ML     P+   +  +L          TAI   + M+ +GI  D+VT + +IN
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            +    +M  +  +  ++ +   +P  I  TT++KG         +L   D++ +   + 
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N V+Y  LL GLC  G+     K+LR + +R   P D  ++  ++   CK   +N A D 
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRP-DVVMYNTIIDGLCKDKLVNEAYDF 294

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              M    I  +   Y  LI  FC A     A  LL+++  K I        + +  +Y 
Sbjct: 295 YTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNI--------NPDVYTYT 346

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I  LC  G+  +A+     + K+GV  + V ++ L+ G+   G   +A +I   M + 
Sbjct: 347 ILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT 406

Query: 444 GVPRDADAYICLIESYLRKGEPAD-AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            V     +Y  +I   L KG+  D A   L  M+     P +  + S+++ L + GR+ +
Sbjct: 407 EVNPSVCSYNIMING-LCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITS 465

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A  +MK +  +G   ++     +L+ L    ++++A+     M + G  PN   + +L+ 
Sbjct: 466 ALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 525

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            L +  +   A KL    L + C ID+ +Y  ++  L   G    A ++  K+ + G + 
Sbjct: 526 GLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIP 585

Query: 620 DWKSSDKLIAGL-NQEGNTKQADILSRMI 647
           D  + + +I  L  ++ N K   +L  MI
Sbjct: 586 DAVTFEIIIRSLFEKDENDKAEKLLHEMI 614



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 184/440 (41%), Gaps = 54/440 (12%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           +L F   V   G F  ++ ++  ++  L ++G+   A  +L  +  +  + D  M+  +I
Sbjct: 221 SLHFHDKVVAQG-FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTII 279

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +   K  +V E+   +  M   G+   V +Y  L       G+ M A    N+M  + I 
Sbjct: 280 DGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P  +TY +++       KL+ A      M   G+  +VVTY+T+++GY    ++  A+++
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI 399

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M +  + P+V SY  MI G    +  D+A+ +  EM   +V PN VTY +L+ GLC 
Sbjct: 400 FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           +G++     +++E+  R   P D   +  LL   CK+ +L+ A  +   M    I     
Sbjct: 460 SGRITSALDLMKELHHRG-QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKY 518

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG---- 394
            Y  LI+  CK      A KL   ++ K   +        +  +YN MI  LC  G    
Sbjct: 519 TYTALIDGLCKGARLKNAQKLFQHILVKGCCI--------DVYTYNVMIGGLCKEGMLDE 570

Query: 395 -------------------------------QTGKAEIFFRQLMKKGVL---------DP 414
                                          +  KAE    +++ KG+L          P
Sbjct: 571 ALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFRNFHGERSP 630

Query: 415 VAFNNLIRGHSKEGNPDSAF 434
           V    ++  H KE    +A+
Sbjct: 631 VTNKVIVNFHEKETLKPTAY 650



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 172/347 (49%), Gaps = 2/347 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L   K    A  F+  +   G+F  D  T+  +I      G+L  A  +L +M
Sbjct: 275 YNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP-DVITYSTLICGFCLAGQLMGAFSLLNEM 333

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K +  D   + +LI++  K+G ++E+  +  +M + GV+ +V +Y  L       G  
Sbjct: 334 TLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEV 393

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             AK+ F+ M+   + P+  +YN+M+ G      ++ A+    +M  + +  + VTYN++
Sbjct: 394 HNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSL 453

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +  ++  A  L  E+  +     VI+YT+++ G    +  D A+ +F +MK   +
Sbjct: 454 IDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGI 513

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +PN  TYTAL+ GLC   ++   QK+ + ++ +     D   +  ++G  CK G L+ A 
Sbjct: 514 QPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGC-CIDVYTYNVMIGGLCKEGMLDEAL 572

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
            +   M       +A  + I+I +  + +  D+A KLL +++ K ++
Sbjct: 573 AMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score = 38.9 bits (89), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 80/177 (45%), Gaps = 3/177 (1%)

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           DA +  + M+   ++P+   F  ++ SL +     TA  + K M  KG++ +L  ++ ++
Sbjct: 115 DAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILI 174

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
                 G +  +   +  +++ G  PN     +L+  L  KG+   ++   D  + +   
Sbjct: 175 NCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQ 234

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++  SY  +L+ L   G+T  A  +L  I ++    D    + +I GL ++    +A
Sbjct: 235 MNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291


>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 219/456 (48%), Gaps = 32/456 (7%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFN----HDRETH 59
           + W  RL  K            V +++   +N + ALQ F   + AG F+    H+ ET+
Sbjct: 93  KPWPQRLSPK-----------RVVSMISRQQNLDLALQIF---DHAGKFHRNFAHNYETY 138

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
           L MIE L +         ++  + K  ++  E++F  +I +YG  G  + +++ F  +  
Sbjct: 139 LAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPS 198

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLE 178
            G++ SV+S++ L   +++  R+ +    F     + GI P   T N+++        ++
Sbjct: 199 FGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDID 258

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            AIR  E+M + G   +VVTY T++ GY     M  A ++F E+ ++   P   +YT ++
Sbjct: 259 AAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILM 318

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE-RYI 297
            GY    R  DA+++ DEM+   V+PN VTY  ++   C   K  EV  +L +M+E +YI
Sbjct: 319 DGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           P   +++  +++ + C+ G +  A ++ K +++ +   +      LI   CK      A 
Sbjct: 379 P--SSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEAR 436

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVA 416
           KL D+  +  I     STL     +YN +I  +C  G+  +A   +  +++KG V +   
Sbjct: 437 KLFDEFEKGSI----PSTL-----TYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFT 487

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           +N LI+G  K GN      +++ M   G   +   Y
Sbjct: 488 YNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 163/353 (46%), Gaps = 16/353 (4%)

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK-NI 227
           +GF    KL  AIR F  + S G+   V ++NT++N   + K+ D    +F   ++K  I
Sbjct: 180 YGFAGRPKL--AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGI 237

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P V +   ++K        D A+R+ +EM +    PN VTYT +L G    G MV  ++
Sbjct: 238 VPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARR 297

Query: 288 VLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           V  E+++R ++P  D + +  L+   CK G    A  V+  M    +      YG++IE 
Sbjct: 298 VFGEILDRGWVP--DPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEA 355

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
           +CK +     + LLD ++EK+ I  P S L         +I  LC  G+   A   +++L
Sbjct: 356 YCKEKKSGEVLNLLDDMLEKKYI--PSSALCCR------VIDMLCEEGKVEVACELWKKL 407

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           +KK    D    + LI    KEG    A ++     +  +P     Y  LI      GE 
Sbjct: 408 LKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTL-TYNALIAGMCEGGEL 466

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
            +A    D+M+E G  P +  +  +++   + G  +   RVM+ M++ G   N
Sbjct: 467 PEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/446 (20%), Positives = 192/446 (43%), Gaps = 50/446 (11%)

Query: 177 LETAIRFFEDMKS--RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           L+ A++ F+      R  + +  TY  MI   ++ +  +  E L +++ +  I+     +
Sbjct: 114 LDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLF 173

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I+ Y    R   A+R F  + SF ++P+  ++  LL  L        VQ    ++V 
Sbjct: 174 ITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTL--------VQNKRFDLVH 225

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
                        L+   C+               +  I        IL++  CK    D
Sbjct: 226 -------------LMFKNCRK--------------KFGIVPNVFTCNILVKALCKKNDID 258

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLD 413
            AI++L+++        P         +Y  ++      G    A   F +++ +G V D
Sbjct: 259 AAIRVLEEM--------PAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPD 310

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           P  +  L+ G+ K+G    A +++  M    V  +   Y  +IE+Y ++ +  +    LD
Sbjct: 311 PTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLD 370

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+E  + P+S+L   V++ L E+G+V+ A  + K +++K    +  + + ++  L   G
Sbjct: 371 DMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEG 430

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            V EA    D   + GS+P+   +++L++ + E G+   A +L D  + + C+ +  +Y 
Sbjct: 431 KVWEARKLFD-EFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYN 489

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKG 616
            ++      G       ++ ++++ G
Sbjct: 490 MLIKGFCKVGNAREGIRVMEEMLDNG 515



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 124/284 (43%), Gaps = 6/284 (2%)

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NN 419
           KL  +  +  P   L     S+N ++  L  N +     + F+   KK  + P  F  N 
Sbjct: 187 KLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNI 246

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L++   K+ + D+A  +++ M   G   +   Y  ++  Y+ KG+   A+     +++ G
Sbjct: 247 LVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRG 306

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P  + +  +M+   + GR   A +VM  M E  V+ N      I+EA        E L
Sbjct: 307 WVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVL 366

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             +D M++   +P+      ++ +L E+GK   A +L    L ++C  D A    ++  L
Sbjct: 367 NLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWL 426

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              GK   A   LF   EKG +    + + LIAG+ + G   +A
Sbjct: 427 CKEGKVWEARK-LFDEFEKGSIPSTLTYNALIAGMCEGGELPEA 469


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 141/616 (22%), Positives = 278/616 (45%), Gaps = 16/616 (2%)

Query: 30  LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
           L    +   AL +F+ V +     H  ET   M+E L   G++     +   M K+ +  
Sbjct: 96  LKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINR 155

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           + + +  + ++   KG ++++      M+Q G   +  SY+ L   +L+ G    A + +
Sbjct: 156 NPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVY 215

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
            +M+SEG++P+  TY+ ++          T +   E+M++ G+  ++ TY   I    R 
Sbjct: 216 KRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRA 275

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
            ++D+A  +   M+++   P V++YT +I    A  + D A  ++ +M++   KP+ VTY
Sbjct: 276 GRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTY 335

Query: 270 TALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
             L+    + G +  V++   EM  + Y P  D   +  L+   CKSG ++ A D+L  M
Sbjct: 336 ITLMSKFGNYGDLETVKRFWSEMEADGYAP--DVVTYTILVEALCKSGKVDQAFDMLDVM 393

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               I      Y  LI         D A++L + +  + + + P       A SY   I 
Sbjct: 394 RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNM--ESLGVAPT------AYSYVLFID 445

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL-IRGHSKEGNPDSAFEIVKIMGRRGVPR 447
           +    G   KA   F ++ K+G++  +A  N  +   ++ G    A +I   +   G+  
Sbjct: 446 YYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSP 505

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D+  Y  +++ Y + G+   A   L  M+ +G  P   +  S++++L++ GRV  A ++ 
Sbjct: 506 DSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMF 565

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
             + +  +   +     ++  L   G + +AL     M +SG  PN   F++LL  L + 
Sbjct: 566 GRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKN 625

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
                A+K+       +C  D+ +Y  ++  L+  G+   A+   +  M+K    D  + 
Sbjct: 626 DAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAF-WFYHQMKKFLSPDHVTL 684

Query: 625 DKLIAGLNQEGNTKQA 640
             L+ G+ ++G  + A
Sbjct: 685 YTLLPGVVKDGRVEDA 700



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 274/606 (45%), Gaps = 21/606 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+   I +LGR G+++ A  IL  M  +G   D   + VLI++    G + ++ +++  M
Sbjct: 264 TYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKM 323

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +    +  + +Y  L       G     KR++++M ++G  P   TY +++     S K+
Sbjct: 324 RASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKV 383

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A    + M+ RGI  ++ TYNT+I+G    +++DEA +LF  M+   + PT  SY   
Sbjct: 384 DQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLF 443

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  Y  +   + AL  F++MK   + P+     A L  L + G++ E + +  ++    +
Sbjct: 444 IDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGL 503

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D+  +  ++    K+G ++ A  +L  M+      +      LI+   KA   D A 
Sbjct: 504 SP-DSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAW 562

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           ++  +L  K++ L P         +YN +I  L   G+  KA   F  + + G   + V 
Sbjct: 563 QMFGRL--KDLKLAPTVV------TYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVT 614

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN L+    K    D A ++   M       D   Y  +I   +++G    A      M 
Sbjct: 615 FNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM- 673

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV-EKGVKENLDLVAKILEALLMRGHV 535
           +   SP      +++  + +DGRV+ A +++   V + G++ +  +  +++E +L+   +
Sbjct: 674 KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEI 733

Query: 536 EEALGRIDLMMQSGSVPNFDS----LLSVLSEKGKTIAAVKLLD-FCLGRDCIIDLASYE 590
           EEA+   + ++   S+   D+    L+ VL ++ K + A KL D F           SY 
Sbjct: 734 EEAISFAEGLV-CNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYN 792

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
            ++D LL    T  A  +  ++   G   +  + + L   L+  G +K+ D L  +    
Sbjct: 793 CLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLL---LDAHGKSKRIDELFELYNEM 849

Query: 651 MSRGSQ 656
           + RG +
Sbjct: 850 LCRGCK 855



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 199/438 (45%), Gaps = 18/438 (4%)

Query: 22   DHNLVYNVLHGAKNS---EHALQF-FRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
            DH  +Y +L G       E A++    +V ++GL     +   +++E +    ++  A  
Sbjct: 680  DHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGL-QTSNQVWGELMECILIEAEIEEAIS 738

Query: 78   ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD-IMKQLGVERSVKSYDALFKLI 136
                +    +  D+++   LI    K+    ++ K+FD   K LG   + +SY+ L   +
Sbjct: 739  FAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGL 798

Query: 137  LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            L       A + F +M + G  P   TYN++L     S +++     + +M  RG   ++
Sbjct: 799  LGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNI 858

Query: 197  VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
            +T+N +I+   +   +++A  L+ E+   +  PT  +Y  +I G +   R+++A++IF+E
Sbjct: 859  ITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEE 918

Query: 257  MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
            M  +  KPN   Y  L+ G   AG +     + + M++  I P D   +  L+     +G
Sbjct: 919  MPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRP-DLKSYTILVECLFMTG 977

Query: 317  HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
             ++ A    + +    +  +   Y ++I    K+   + A+ L  ++  + I        
Sbjct: 978  RVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGI-------- 1029

Query: 377  DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NNLIRGHSKEGNPDSAF 434
              E  +YN +I H  + G   +A   F +L   G L+P  F  N LIRGHSK GN D AF
Sbjct: 1030 SPELYTYNALILHFGNAGMVDQAGKMFEELQFMG-LEPNVFTYNALIRGHSKSGNKDRAF 1088

Query: 435  EIVKIMGRRGVPRDADAY 452
             + K M   G   +A  +
Sbjct: 1089 SVFKKMMIVGCSPNAGTF 1106



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 132/255 (51%), Gaps = 2/255 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            HN++ + L  + +   AL  +  +  +G F+    T+  +I  L + G+   A  I  +M
Sbjct: 861  HNIIISALVKSNSINKALDLYYEI-ISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEM 919

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            P    + +  ++ +LI  +GK G V  +  +F  M + G+   +KSY  L + +   GR 
Sbjct: 920  PDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRV 979

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              A  YF ++   G++P   +YN+M+ G   S +LE A+  F +MK+RGIS ++ TYN +
Sbjct: 980  DDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNAL 1039

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I  +     +D+A K+F E++   +EP V +Y  +I+G+      D A  +F +M     
Sbjct: 1040 ILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGC 1099

Query: 263  KPNAVTYTALLPGLC 277
             PNA T+ A LP  C
Sbjct: 1100 SPNAGTF-AQLPNKC 1113



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 115/550 (20%), Positives = 212/550 (38%), Gaps = 88/550 (16%)

Query: 58   THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            T+  +I  LG+ GKL  A  +   M + G   +   F  L++   K   V  ++K+F  M
Sbjct: 579  TYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRM 638

Query: 118  KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM---LS-------------------- 154
              +     V +Y+ +   +++ GR   A  ++++M   LS                    
Sbjct: 639  TIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVE 698

Query: 155  ------------EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                         G++ +   +  ++    +  ++E AI F E +    I  D      +
Sbjct: 699  DAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPL 758

Query: 203  INGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            I    + KK  +A+KLF +  K     PT  SY  ++ G +     + AL++F EMK+  
Sbjct: 759  IRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAG 818

Query: 262  VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK---DNSVFMKLLGVQCKSGHL 318
              PN  TY  LL     + ++ E+ ++  EM+ R   P     N +   L+    KS  +
Sbjct: 819  CCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALV----KSNSI 874

Query: 319  NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            N A D+   +I          YG LI    KA   + A+K+ +++ + +   +P   +  
Sbjct: 875  NKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQC--KPNCAI-- 930

Query: 379  EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
                                                  +N LI G  K GN + A ++ K
Sbjct: 931  --------------------------------------YNILINGFGKAGNVNIACDLFK 952

Query: 439  IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
             M + G+  D  +Y  L+E     G   DA    + +   G  P +  +  ++  L +  
Sbjct: 953  RMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSR 1012

Query: 499  RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
            R++ A  +   M  +G+   L     ++      G V++A    + +   G  PN   ++
Sbjct: 1013 RLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYN 1072

Query: 556  SLLSVLSEKG 565
            +L+   S+ G
Sbjct: 1073 ALIRGHSKSG 1082


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 117/499 (23%), Positives = 223/499 (44%), Gaps = 36/499 (7%)

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
           ++ E+  ++  M++ G   S +S + L + ++    +      F  ++  G  P    Y 
Sbjct: 102 MLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYG 161

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
             +    +   L+      + M   G+   V  YN ++ G  + +++ +A KLF EM ++
Sbjct: 162 KAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQR 221

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
           N+ P  ++Y T+I GY  V   ++AL   + MK  +V+ N VTY +LL GLC +G++ + 
Sbjct: 222 NMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDA 281

Query: 286 QKVLREMVERYIPPK---------------------------DNSVFMKLLGVQCKSGHL 318
           ++VL EM      P                            D   +  LL   C+ G +
Sbjct: 282 REVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRI 341

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A +VL  ++   +      Y IL+  +C+     +AI   +++ E+   L P      
Sbjct: 342 EKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERG--LEPNRI--- 396

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIV 437
              ++N +I   C  G+   AE + R++++KGV   V  +N+LI G+ ++G+    FE +
Sbjct: 397 ---TFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFL 453

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M + G+  +  +Y  LI    +  +  DA+  L  MI  G SP + ++  ++E+    
Sbjct: 454 DEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSL 513

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
            +++ A R    M++ G+   L     ++  L   G V++A      M   G  P+  + 
Sbjct: 514 SKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITY 573

Query: 558 LSVLSEKGKTIAAVKLLDF 576
            S++S   K++   K L+ 
Sbjct: 574 NSLISGYAKSVNTQKCLEL 592



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 203/428 (47%), Gaps = 14/428 (3%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           AE      ++N +     +  +N++ N      + + A+     +E  GL   +R T   
Sbjct: 344 AEEVLAKLVENGVTP--SKISYNILVNAYCQEGDVKKAILTTEQMEERGL-EPNRITFNT 400

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I      G+++HA   +  M +KGV    + +  LI  YG+KG      +  D M + G
Sbjct: 401 VISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG 460

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ +V SY +L   + +  + + A+     M+  G+ P    YN+++       KL+ A 
Sbjct: 461 IKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAF 520

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           RFF++M   GI   +VTYNT+ING  R  ++ +AE LF +M  K   P VI+Y ++I GY
Sbjct: 521 RFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGY 580

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                    L ++D+MK   +KP   T+  L+   C    +V + K+ +EM++  + P D
Sbjct: 581 AKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVP-D 638

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             V+ +++    + G++  A  + + M+   +  +   Y  LI  + +         L+D
Sbjct: 639 QFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVD 698

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFN-NL 420
            +  K ++ +          +YN +I+ LC       A  ++R+++++G+L  V+    L
Sbjct: 699 DMKAKGLVPK--------VDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQL 750

Query: 421 IRGHSKEG 428
           I G  +EG
Sbjct: 751 ISGLREEG 758



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 141/610 (23%), Positives = 257/610 (42%), Gaps = 75/610 (12%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L +V ++  AR +  +M ++ +  +   +  LI+ Y K G ++E++   + MK+  VE +
Sbjct: 202 LCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECN 261

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           + +Y++L   +   GR   A+    +M   G  P          G FLS   +       
Sbjct: 262 LVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLP----------GGFLSFVFDDHSNGAG 311

Query: 186 D---MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
           D      + I +D  TY  ++NG  R  ++++AE++ A++ E  + P+ ISY  ++  Y 
Sbjct: 312 DDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYC 371

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                  A+   ++M+   ++PN +T+  ++   C+ G++   +  +R MVE+ + P   
Sbjct: 372 QEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVE 431

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK-----------AE 351
           + +  L+    + GH     + L  M +  I      YG LI   CK           A+
Sbjct: 432 T-YNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLAD 490

Query: 352 MYDRAI----KLLDKLVEKEIILRP------------QSTLDMEASSYNPMIQHLCHNGQ 395
           M  R +    ++ + L+E    L              QS +D    +YN +I  L  NG+
Sbjct: 491 MIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGR 550

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             KAE  F Q+  KG   D + +N+LI G++K  N     E+   M   G+      +  
Sbjct: 551 VKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHP 610

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI +  ++G     K     M++    P   ++  ++ S  EDG V  A  + + MV++G
Sbjct: 611 LIYACRKEGVVTMDKM-FQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQG 669

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
           V  +      ++ A L    V E    +D M   G VP  D+                  
Sbjct: 670 VDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDT------------------ 711

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                         Y  ++  L        AY    +++E+G + +     +LI+GL +E
Sbjct: 712 --------------YNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREE 757

Query: 635 GNTKQADILS 644
           G  ++A I+S
Sbjct: 758 GMLREAQIVS 767



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/494 (22%), Positives = 222/494 (44%), Gaps = 49/494 (9%)

Query: 50  GLFNH-----DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKK 104
           GLF+      D  T+  ++  L RVG++  A  +L  + + GV   +  + +L+ +Y ++
Sbjct: 314 GLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQE 373

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
           G V++++   + M++ G+E +  +++ +       G    A+ +  +M+ +G+ PT  TY
Sbjct: 374 GDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETY 433

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N ++ G+           F ++M   GI  +V++Y ++IN   + +K+ +AE + A+M  
Sbjct: 434 NSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIG 493

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
           + + P    Y  +I+   ++ +  DA R FDEM    +    VTY  L+ GL   G++  
Sbjct: 494 RGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRV-- 551

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
                          K   +F+++ G  C         DV+              Y  LI
Sbjct: 552 --------------KKAEDLFLQMAGKGCN-------PDVIT-------------YNSLI 577

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             + K+    + ++L DK+  K + ++P         +++P+I      G     ++F  
Sbjct: 578 SGYAKSVNTQKCLELYDKM--KILGIKPT------VGTFHPLIYACRKEGVVTMDKMFQE 629

Query: 405 QLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
            L    V D   +N +I  ++++GN   A  + + M  +GV  D   Y  LI +YLR   
Sbjct: 630 MLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRR 689

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
            ++ K  +D M   G  P    +  +++ L +      A    + MVE+G+  N+ +  +
Sbjct: 690 VSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQ 749

Query: 525 ILEALLMRGHVEEA 538
           ++  L   G + EA
Sbjct: 750 LISGLREEGMLREA 763



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 114/533 (21%), Positives = 225/533 (42%), Gaps = 37/533 (6%)

Query: 136 ILRRGRYMMAKRYFNKML------SEGIEPTRHTY-----NVMLWGFFLSLKLETAIRFF 184
           ++ RGR + A+R+   +L      S   E   H       + +LW   +S  L+ A   +
Sbjct: 51  LISRGRTITARRFLRSLLLTKTAFSSLSELHAHVSKPFFSDNLLWLCSVSKMLDEATDLY 110

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
             M+  G      + N ++      +  ++   +FA++ +    P  ++Y   ++  V +
Sbjct: 111 STMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVML 170

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
           +  D    +   M    + P+   Y  +L GLC   ++ + +K+  EM++R + P +   
Sbjct: 171 KDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVP-NTVT 229

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+   CK G +  A    + M   ++      Y  L+   C +   D A ++L    
Sbjct: 230 YNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVL---- 285

Query: 365 EKEIILRPQSTLDMEASSYNP--MIQHLC--HNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
                      L+ME S + P   +  +   H+   G   +F  + ++   +D   +  L
Sbjct: 286 -----------LEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIR---IDERTYCIL 331

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G  + G  + A E++  +   GV     +Y  L+ +Y ++G+   A    + M E G 
Sbjct: 332 LNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGL 391

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    F +V+    E G V  A   ++ MVEKGV   ++    ++     +GH      
Sbjct: 392 EPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFE 451

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            +D M ++G  PN   + SL++ L +  K I A  +L   +GR    +   Y  +++A  
Sbjct: 452 FLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASC 511

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           +  K  +A+    ++++ G      + + LI GL + G  K+A+ L   + G+
Sbjct: 512 SLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGK 564


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 238/506 (47%), Gaps = 13/506 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R GKL     +      +GV+ D  +F  ++++Y + G + ++++++  M + G
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V +Y  L   + R GR + A   F ++L +G+EP+  TY+ ++ GF  S  L    
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             +  M  +G   DVV  + +ING +R   MDEA + F +  ++ +      +  +I G 
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGC 495

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             ++R  D L+++  M  + V P+ VTYT L+ GL + G++ E   +  +++++   P D
Sbjct: 496 FRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSP-D 554

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           + ++  L+   CK         + K M    I  +   Y +LI  F +    +  ++LL 
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELL- 613

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
               +EII   +  L+ +  +YN MI   C      KA   F +++K G   P  + F  
Sbjct: 614 ----REII---KYGLEPDIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTI 665

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI  + K+G  D A  I   M  RG   +   Y CLI+ Y +      A    + M+ D 
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            SP    +  +++ L + G ++ AS   +  + + +  ++     ++      G + EA+
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 540 GRIDLMMQSGSVPNFDSLLSVLSEKG 565
              D M+ +G +P+ D L   L+E G
Sbjct: 786 MLYDHMLVNGIMPD-DLLQKALAEYG 810



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/594 (21%), Positives = 253/594 (42%), Gaps = 67/594 (11%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++E +  S+ K+G V++ +     + + G+   +   + + K +    +  +A  +F+ M
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G  P   T++ ++  +   L+L+ A   +  M  +GI  D+V Y+ +ING  R  K+
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +E   LF+    + ++  V+ +++++  YV V     A+ ++  M    + PN VTY+ L
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GLC  G+++E   V  +++++ + P   + +  L+   CKS +L     +   M+R  
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLT-YSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL----------------RPQSTL 376
              +     +LI    +  M D A++   + V++ + L                R +  L
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505

Query: 377 DM-----------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
            M           +  +Y  +++ L   G+  +A   F QL+KKG   D + +  LI G 
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG----- 479
            K+ +P +  +I K+M   G+  D   Y  LI  + R+G   +    L  +I+ G     
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 480 ------------------------------HSPASSLFRSVMESLFEDGRVQTASRVMKS 509
                                           P +  F  ++++  +DGR+  A  +  S
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGK 566
           M+E+G + N+   + +++      + E A    + M+     PN  S   L+  L +KG 
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGL 745

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
              A       +GR  + D+ +Y  ++      G+   A  +   ++  G + D
Sbjct: 746 MEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 137/268 (51%), Gaps = 3/268 (1%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +++ L   G+L+ A  +   + KKG   D  ++  LI+ + KK      ++IF
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            +M+  G+   +  Y+ L  +  R G          +++  G+EP   TYN M+ G+  S
Sbjct: 579 KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY-CS 637

Query: 175 LKLET-AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           LK+ + AI+ FE +K      + +T+  +I+ Y +  +MD+A  +F+ M E+  EP +++
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y+ +I GY   E  + A  ++++M    V PN V+Y+ L+ GLC  G M E     +  +
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAI 757

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            R++ P D   +  L+   CK G L  A
Sbjct: 758 GRHLLP-DVIAYGILIRGYCKVGRLAEA 784



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 113/523 (21%), Positives = 221/523 (42%), Gaps = 45/523 (8%)

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LG+   V+S+  +  ++LR   +  A R F++M+ +             +G      LE 
Sbjct: 83  LGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQ-------------FG-----NLEV 124

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
              F    ++ G +   V Y+ +++ Y R   +D A   FA M +  +  +  + + M+ 
Sbjct: 125 LGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLD 183

Query: 240 GYVAVERADDALRIFDEM-KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL---REMVER 295
             +  +R D  L  ++EM K   V      + + L       K  EV+K L   R +VER
Sbjct: 184 LLIDSDRIDVILENYEEMCKGLGVY--EFVFNSFL-------KRGEVEKGLNFHRALVER 234

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            + PK      K+L   C    +  A+D    M+R         +  LI  +CK    D 
Sbjct: 235 GLVPKIVDC-NKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDE 293

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A  L + ++EK I+  P   +      Y+ +I  L   G+  +    F   + +GV +D 
Sbjct: 294 AFSLYNLMIEKGIV--PDLVI------YSILINGLFRAGKLEEGNSLFSMALARGVKMDV 345

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V F++++  + + G+   A E+   M + G+  +   Y  LI    R G   +A      
Sbjct: 346 VIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQ 405

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           +++ G  P+   + S+++   +   ++    +   M+ KG   ++ + + ++  L  +G 
Sbjct: 406 ILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGM 465

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           ++EAL      ++ G   N   F++L+       +T   +K+         I D+ +Y  
Sbjct: 466 MDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTV 525

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           ++  L   G+   A ++ F++++KG   D      LI G  ++
Sbjct: 526 LVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKK 568


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 210/457 (45%), Gaps = 15/457 (3%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI  + + G  +++  + +I++Q G    V +Y+ L     + G    A +  ++M    
Sbjct: 98  LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---N 154

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TYN +L     S KL+ A+   +    +    DV+TY  +I    +   + +A 
Sbjct: 155 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 214

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           KL  EM+ K  +P V++Y  +I G     R D+A++  + M S+  +PN +T+  +L  +
Sbjct: 215 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  G+ ++ +K+L +M+ +   P   + F  L+   C+ G L  A D+L+ M        
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVT-FNILINFLCRQGLLGRAIDILEKMPMHGCTPN 333

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
           +  Y  L+  FCK +  DRAI+ LD +V +            +  +YN ++  LC +G+ 
Sbjct: 334 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY--------PDIVTYNTLLTALCKDGKV 385

Query: 397 GKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             A     QL  KG   PV   +N +I G SK G  + A +++  M R+G+  D   Y  
Sbjct: 386 DVAVEILNQLSSKGC-SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 444

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           L+    R+G+  +A      +   G  P +  + S+M  L +  +   A   +  M+ K 
Sbjct: 445 LVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR 504

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
            K        ++E +   G  +EAL  ++ +   G V
Sbjct: 505 CKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 221/485 (45%), Gaps = 37/485 (7%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +LE   +F E M  RG   D++   ++I G+ R  K  +A  +   +++    P VI+Y 
Sbjct: 72  ELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYN 131

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I GY      D+AL++ D M   +V P+ VTY  +L  LCD+GK+ +  +VL   +++
Sbjct: 132 VLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 188

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P D   +  L+   CK   +  A  +L  M       +   Y +LI   CK    D 
Sbjct: 189 ECYP-DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247

Query: 356 AIKLLDKL---------VEKEIILRPQST----LDME--------------ASSYNPMIQ 388
           AIK L+ +         +   IILR   +    +D E                ++N +I 
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 307

Query: 389 HLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G  G+A +I  +  M     + +++N L+ G  KE   D A E + IM  RG   
Sbjct: 308 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 367

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  L+ +  + G+   A   L+ +   G SP    + +V++ L + G+ + A +++
Sbjct: 368 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
             M  KG+K ++   + ++  L   G V+EA+     +   G  PN   ++S++  L + 
Sbjct: 428 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 487

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
            +T  A+  L + + + C    A+Y  +++ +   G    A  +L ++  +G V   KSS
Sbjct: 488 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVK--KSS 545

Query: 625 DKLIA 629
            + +A
Sbjct: 546 AEQVA 550



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 160/316 (50%), Gaps = 3/316 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  + + G+L+ A   L +MP  G Q +     +++ S    G   ++ K+ 
Sbjct: 228 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 287

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M + G   SV +++ L   + R+G    A     KM   G  P   +YN +L GF   
Sbjct: 288 SDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKE 347

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K++ AI + + M SRG   D+VTYNT++    +  K+D A ++  ++  K   P +I+Y
Sbjct: 348 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 407

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I G   V + + A+++ DEM+   +KP+ +TY++L+ GL   GK+ E  K   ++  
Sbjct: 408 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 467

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMY 353
             I P   +    +LG+ CKS   + A D L  MI +   PTEA  Y ILIE      + 
Sbjct: 468 LGIRPNAITYNSIMLGL-CKSRQTDRAIDFLAYMISKRCKPTEA-TYTILIEGIAYEGLA 525

Query: 354 DRAIKLLDKLVEKEII 369
             A+ LL++L  + ++
Sbjct: 526 KEALDLLNELCSRGLV 541



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 193/432 (44%), Gaps = 18/432 (4%)

Query: 25  LVYNVLHG--AKNSE--HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YNVL     K+ E  +ALQ    +  A     D  T+  ++  L   GKL  A  +L 
Sbjct: 128 ITYNVLISGYCKSGEIDNALQVLDRMNVA----PDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
              +K    D   + +LIE+  K+  V +++K+ D M+  G +  V +Y+ L   I + G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A ++ N M S G +P   T+N++L     + +   A +   DM  +G S  VVT+N
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +IN   R   +  A  +  +M      P  +SY  ++ G+   ++ D A+   D M S 
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+ VTY  LL  LC  GK+    ++L ++  +   P   +    + G+  K G    
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS-KVGKTER 422

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +L  M R  +  +   Y  L+    +    D AIK    L  + + +RP       A
Sbjct: 423 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL--EGLGIRPN------A 474

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKI 439
            +YN ++  LC + QT +A  F   ++ K      A +  LI G + EG    A +++  
Sbjct: 475 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 534

Query: 440 MGRRGVPRDADA 451
           +  RG+ + + A
Sbjct: 535 LCSRGLVKKSSA 546



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 180/397 (45%), Gaps = 16/397 (4%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           +D  +  + M      P+ +  T+L+ G C  GK  +   V+ E++E+     D   +  
Sbjct: 74  EDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVM-EILEQSGAVPDVITYNV 132

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   CKSG ++ A  VL    R+++  +   Y  ++   C +    +A+++LD+ ++KE
Sbjct: 133 LISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 189

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
                      +  +Y  +I+  C     G+A     ++  KG   D V +N LI G  K
Sbjct: 190 CY--------PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           EG  D A + +  M   G   +   +  ++ S    G   DA+  L  M+  G SP+   
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F  ++  L   G +  A  +++ M   G   N      +L        ++ A+  +D+M+
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
             G  P+   +++LL+ L + GK   AV++L+    + C   L +Y  V+D L   GKT 
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            A  +L ++  KG   D  +   L++GL++EG   +A
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 458



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 86/181 (47%)

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
           +R GE  D    L+SM+  G  P      S++      G+ + A+ VM+ + + G   ++
Sbjct: 68  VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 127

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLG 579
                ++      G ++ AL  +D M  +  V  ++++L  L + GK   A+++LD  L 
Sbjct: 128 ITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
           ++C  D+ +Y  +++A         A  +L ++  KG   D  + + LI G+ +EG   +
Sbjct: 188 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247

Query: 640 A 640
           A
Sbjct: 248 A 248


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 147/651 (22%), Positives = 280/651 (43%), Gaps = 79/651 (12%)

Query: 66  LGRVGKLNHARCILLDMPKKG-------VQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           L R G+++ A  +   M + G       V W+      L++ Y K G ++ +  + + MK
Sbjct: 147 LCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNS-----LVDGYCKVGDMETAFAVAERMK 201

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
             GV   V  Y++L   + R G    A+   + M  +G+EP   TY + +  +     ++
Sbjct: 202 AQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVD 261

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A   +E+M  +G+  DVVT + ++ G  +  +  EA  LF EM++    P  ++Y  +I
Sbjct: 262 DAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLI 321

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
                 +R +++L +  E+ S  V  + + YTAL+  LC  GK+ E + + R  +     
Sbjct: 322 DTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHT 381

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +   +  L+   CK+G+++ A  VL  M   SI      +  +I    K     +A  
Sbjct: 382 P-NGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATD 440

Query: 359 LLDKLVEKEI----------------ILRPQSTLD---------MEASSY--NPMIQHLC 391
            + ++ E+ I                 L  ++ LD         +E + +  + ++  L 
Sbjct: 441 YMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLK 500

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            NG+  KAE  FR++ ++GV LD V +  LI G  K GN  +AF++ + +  + +  DA 
Sbjct: 501 KNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAV 560

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y   I      G+  +A++ L+ M   G  P    + +++ +   +G+   A +++  M
Sbjct: 561 VYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM 620

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN----------------- 553
               +K NL   + ++  L   G VE+A   ++ M  SG  P                  
Sbjct: 621 KRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRS 680

Query: 554 ---------------------FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
                                +++L+ VL   G T  A+ +L+   GR    D  ++  +
Sbjct: 681 DLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNAL 740

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           +     +G   NA+S   +++  G   +  + + L+ GL   G   ++D++
Sbjct: 741 ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMV 791



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/617 (22%), Positives = 272/617 (44%), Gaps = 46/617 (7%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L R G+++ AR ++  M + GV+ +   + + I  Y ++  V ++  +++ M + G
Sbjct: 215 LVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKG 274

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V   V +  AL   + + GR+  A   F +M   G  P   TY +++     + +   ++
Sbjct: 275 VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               ++ SRG+ +D++ Y  +++   +  K+DEA+ +F      N  P  ++YT +I   
Sbjct: 335 SLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDAL 394

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK- 300
                 D A ++  EM+   + PN VT+++++ GL   G + +    +REM ER I P  
Sbjct: 395 CKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNV 454

Query: 301 -------DNS-----------VFMKLL--GVQC-------------KSGHLNAAADVLKA 327
                  D S           V+ ++L  GV+              K+G +  A  + + 
Sbjct: 455 VTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFRE 514

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M    +  +  +Y  LI+   K      A K+  +L EK ++         +A  YN  I
Sbjct: 515 MNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLL--------PDAVVYNVFI 566

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             LC  G++ +AE F  ++   G+  D V +N +I   S+EG    A +++  M R  + 
Sbjct: 567 NCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIK 626

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            +   Y  LI      G    AK  L+ M   G SP S   R V+++  +  R      +
Sbjct: 627 PNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEI 686

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
            + M+  G+  ++ +   ++  L   G   +A+  ++ M   G  P+   F++L+    +
Sbjct: 687 HEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFK 746

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G    A    D  L      ++A++  +L  L +AG+   +  +L ++ ++G      +
Sbjct: 747 SGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLT 806

Query: 624 SDKLIAGLNQEGNTKQA 640
            D L+ G  ++ N  +A
Sbjct: 807 YDILVTGYGKQSNKVEA 823



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/582 (22%), Positives = 250/582 (42%), Gaps = 33/582 (5%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           R   KI A      + ++ + L  A+    +L     V   G+   D   +  +++ L +
Sbjct: 303 REMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVV-MDLIMYTALMDWLCK 361

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
            GK++ A+ +           +   + VLI++  K G V  + ++   M++  +  +V +
Sbjct: 362 EGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVT 421

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           + ++   +++RG    A  Y  +M   GI+P   TY  ++ G F  L  E A+  + +M 
Sbjct: 422 FSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEML 481

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             G+ ++    ++++NG  +  K+++AE LF EM E+ +    ++YTT+I G        
Sbjct: 482 CEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLP 541

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A ++  E+   ++ P+AV Y   +  LC  GK  E +  L EM    + P D   +  +
Sbjct: 542 AAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKP-DQVTYNTM 600

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE--- 365
           +  Q + G    A  +L  M R SI      Y  LI    +A   ++A  LL+++     
Sbjct: 601 IAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGF 660

Query: 366 -------------------KEIILRPQ-----STLDMEASSYNPMIQHLCHNGQTGKAEI 401
                               ++IL        + L  + + YN +++ LC+NG T KA +
Sbjct: 661 SPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMV 720

Query: 402 FFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
              ++  +G+  D + FN LI GH K G+ D+AF     M   G+  +   +  L+    
Sbjct: 721 VLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLE 780

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
             G   ++   L+ M + G  P++  +  ++    +      A R+   MV KG    + 
Sbjct: 781 SAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVS 840

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLS 559
               ++      G + +A    + M   G +P    +D L+S
Sbjct: 841 TYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVS 882



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/519 (22%), Positives = 217/519 (41%), Gaps = 51/519 (9%)

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT------------------------ 198
           +YNV++ GF     L        +M  RG+  D VT                        
Sbjct: 105 SYNVVMSGFSEQGGLAPEA-LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVM 163

Query: 199 -------------YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
                        +N++++GY +   M+ A  +   MK + +   V+ Y +++ G     
Sbjct: 164 VRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAG 223

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             D A  + D MK   V+PN VTYT  +   C    + +   +  EMV + + P D    
Sbjct: 224 EVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLP-DVVTL 282

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             L+G  CK G  + A  + + M ++        Y +LI+   KA+  + ++ LL ++V 
Sbjct: 283 SALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVS 342

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ-LMKKGVLDPVAFNNLIRGH 424
           + ++        M+   Y  ++  LC  G+  +A+  FR  L      + V +  LI   
Sbjct: 343 RGVV--------MDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDAL 394

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K GN D A +++  M  + +  +   +  +I   +++G    A   +  M E G  P  
Sbjct: 395 CKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNV 454

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             + +V++  F+    + A  V   M+ +GV+ N  +V  ++  L   G +E+A      
Sbjct: 455 VTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFRE 514

Query: 545 MMQSGSV---PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M + G +    N+ +L+  L + G   AA K+      ++ + D   Y   ++ L   GK
Sbjct: 515 MNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGK 574

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +  A S L ++   G   D  + + +IA  ++EG T +A
Sbjct: 575 SKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKA 613



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 128/554 (23%), Positives = 221/554 (39%), Gaps = 105/554 (18%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+ L + G ++ A  +L +M +K +  +   F  +I    K+G V ++      M
Sbjct: 386 TYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREM 445

Query: 118 KQLGVERSVKSY----DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           K+ G++ +V +Y    D  FK + +      A   +++ML EG+E  +   + ++ G   
Sbjct: 446 KERGIDPNVVTYGTVIDGSFKCLGQEA----ALDVYHEMLCEGVEVNKFIVDSLVNGLKK 501

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMING---------------------------- 205
           + K+E A   F +M  RG+ LD V Y T+I+G                            
Sbjct: 502 NGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVV 561

Query: 206 YNRF-------KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN F        K  EAE    EM+   ++P  ++Y TMI       +   AL++ + MK
Sbjct: 562 YNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK 621

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK------------------ 300
              +KPN +TY+ L+ GL +AG + + + +L EM      P                   
Sbjct: 622 RSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSD 681

Query: 301 ----------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
                           D +V+  L+ V C +G    A  VL+ M    I  +   +  LI
Sbjct: 682 LILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALI 741

Query: 345 ENFCKAEMYDRAIKLLDKLV-------------------------EKEIILRPQSTLDME 379
               K+   D A    D+++                         E +++L       +E
Sbjct: 742 LGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIE 801

Query: 380 ASSYNPMIQHLCHNGQTGKAEI--FFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEI 436
            S+    I    +  Q+ K E    + +++ KG L  V+ +N LI   SK G    A E+
Sbjct: 802 PSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKEL 861

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M  RGV   +  Y  L+  + +     + +  L  M E G SP+     S+  +  +
Sbjct: 862 FNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSK 921

Query: 497 DGRVQTASRVMKSM 510
            G    A R++K++
Sbjct: 922 PGMSWEARRLLKNL 935



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 125/273 (45%), Gaps = 1/273 (0%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
              H  V       + S+  L+   W+  AGL   D   +  ++ +L   G    A  +L
Sbjct: 664 SLTHRRVLQACSQGRRSDLILEIHEWMMNAGLC-ADITVYNTLVRVLCYNGMTRKAMVVL 722

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M  +G+  D   F  LI  + K G +  +   +D M   G+  +V +++ L   +   
Sbjct: 723 EEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESA 782

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           GR   +    N+M   GIEP+  TY++++ G+        A+R + +M  +G    V TY
Sbjct: 783 GRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTY 842

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N +I+ +++   M +A++LF EM+ + + PT  +Y  ++ G+  +    +  +   +MK 
Sbjct: 843 NALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKE 902

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
               P+  T +++       G   E +++L+ +
Sbjct: 903 KGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 239/533 (44%), Gaps = 22/533 (4%)

Query: 129 YDALFKLILRR-GRYMMAK---RYFNKMLSEGIE-PTRHTYNVMLWGFFLSLKLETAIRF 183
           +D  F+ +L    RY +     R F  M       PT  TYN ++        L  A R+
Sbjct: 92  FDRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRY 151

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
              M   G   D  T+N++I GY R ++++ A  LF +M  +      +SY  +I+G+  
Sbjct: 152 LSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCE 211

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             R D+AL +F EM     +P+  T+ AL+ GLCDAG+  E   +L++M E    P   +
Sbjct: 212 AGRIDEALELFREM----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRA 267

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  L+ + C+      A  +L  M    +        I++  +C+      A+++ + +
Sbjct: 268 -YAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESM 326

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIR 422
             K          +    +YN ++Q  C+ G+  KA     Q+ + GV  D V +N LIR
Sbjct: 327 RFK--------GCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIR 378

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G   +G+  SAF ++++M   G+  D   Y  LI++  + G+  +A +  D +   G  P
Sbjct: 379 GQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP 438

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            S  F +V+  L + G+   A   +++M+  G   +    +  +E L      +E L  I
Sbjct: 439 NSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFI 498

Query: 543 DLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
           D M+Q    P   N+  +++ L  +     A ++    + + C  D+ +Y   + A    
Sbjct: 499 DEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNE 558

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMS 652
           G+   A +++ ++ +   + D  + + LI G    G T +A  + + + G  S
Sbjct: 559 GRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVAS 611



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/513 (23%), Positives = 228/513 (44%), Gaps = 37/513 (7%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           F  L+  + +  +    +++F  M +      +  +Y+AL + + RR     A+RY + M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G  P   T+N ++ G+  + +LE A   F  M  RG S D V+Y  +I G+    ++
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           DEA +LF EM     +P + ++  ++KG     R ++ L +  +MK    +P    Y AL
Sbjct: 216 DEALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAAL 271

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +   C   K  E +K+L EM +  + P   +  + ++   C+ G ++ A  V ++M    
Sbjct: 272 VDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTI-VVNAYCREGRMSGAVRVFESMRFKG 330

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKL----VEKEII-----LRPQST-------- 375
                  Y  +++ FC A    +A+ LLD++    VE +++     +R Q          
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390

Query: 376 ----------LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
                     L  +  +YN +I  LC  G+  +A   F  L  +G+  + V FN +I G 
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K G  D A   ++ M   G   D   Y   IE+  +     +    +D M++    P++
Sbjct: 451 CKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPST 510

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             +  V+  LF +     A+R+   MV +G   ++      + A    G ++EA   +  
Sbjct: 511 VNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTE 570

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           M +  ++ +   +++L+   +  G+T  AV +L
Sbjct: 571 MKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTIL 603



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 151/698 (21%), Positives = 291/698 (41%), Gaps = 90/698 (12%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N +   L    +  HA ++   + R+G +  D  T   +I    R  +L  A  +   M
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSG-WRPDAFTFNSLILGYCRTQQLEVAHDLFCKM 190

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIF---------------------------- 114
           P +G   D   +  LIE + + G + E++++F                            
Sbjct: 191 PFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGL 250

Query: 115 ---DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
                MK+LG   + ++Y AL  L  R  +   A++  N+M   G+ P   T  +++  +
Sbjct: 251 CMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAY 310

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               ++  A+R FE M+ +G   +V TYN ++ G+    K+ +A  L  +M+E  +EP V
Sbjct: 311 CREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDV 370

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++Y  +I+G         A R+   M+   +  +  TY  L+  LC  GK+ E   +   
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 292 MVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           +  R I P  NSV F  ++   CK+G  + A   L+ MI      +   Y   IEN CK 
Sbjct: 431 LEYRGIRP--NSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKT 488

Query: 351 EMYDRAIKLLDKLVEKEIILRPQST-----------------------------LDMEAS 381
           +     +  +D++++K++  +P +                                 +  
Sbjct: 489 KGSQEGLFFIDEMLQKDV--KPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVV 546

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y   ++  C+ G+  +AE    ++ K + ++D +A+N LI GH+  G  D A  I+K M
Sbjct: 547 TYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHM 606

Query: 441 -GRRGVPRDADAYICLI---------------ESYLRKGEPADAKTALDSMIEDGHSPAS 484
            G   +P     +I L                 S  +  E AD     + M ++    ++
Sbjct: 607 TGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSA 666

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             + S++E   E+ R+   + ++  M E+ +  N D+   ++          +A   +  
Sbjct: 667 RTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCS 726

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M+  G +PN   +  LLS L+ +G+   A ++      ++   D   ++ ++D  +  G 
Sbjct: 727 MIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGH 786

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
               + ++  ++E+      K SD+  A L +E  T++
Sbjct: 787 ADMCHDMI-SMLEQ---MKCKPSDETYAMLTEELPTRE 820



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 155/364 (42%), Gaps = 18/364 (4%)

Query: 295 RYIPPKDN-SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           R+ PP    + +  L+   C+   L  A   L  M+R     +A  +  LI  +C+ +  
Sbjct: 121 RHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQL 180

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
           + A  L  K+        P      +A SY  +I+  C  G+  +A   FR++ +  +  
Sbjct: 181 EVAHDLFCKM--------PFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYT 232

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
             A   L++G    G  +    +++ M   G      AY  L++ + R+ +  +A+  L+
Sbjct: 233 HAA---LVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILN 289

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M + G  P       V+ +   +GR+  A RV +SM  KG + N+     I++     G
Sbjct: 290 EMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAG 349

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            V +A+  +D M + G  P+   ++ L+      G   +A +LL    G     D  +Y 
Sbjct: 350 KVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYN 409

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
            ++DAL   GK   A S+   +  +G   +  + + +I GL + G   + D+    +   
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAG---KFDVACTFLENM 466

Query: 651 MSRG 654
           +S G
Sbjct: 467 ISAG 470


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 241/535 (45%), Gaps = 46/535 (8%)

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTYNVMLWGFFLSL 175
           +LG    V SY  L K +  +G+   A     +M++EG     P    YN ++ GFF   
Sbjct: 188 ELGCVPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVCSPNVVAYNTVIDGFFKEG 246

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
            +  A   F++M  RGI  D+VTYN++++   + + MD+AE    +M  K + P   +Y 
Sbjct: 247 DVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 306

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I GY +  +  +A+R+F EM+   + P+ VT + L+  LC  GK+ E + V   M  +
Sbjct: 307 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 366

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P   S  + L G   K G L    D+   M+   I  +   + +LI+ +    M D+
Sbjct: 367 GQNPDVFSYNIMLNGYATK-GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDK 425

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A+ + +++ +  +  +P      +  +Y  +I  LC  G+   A   F Q++ +GV  D 
Sbjct: 426 AMIIFNEMRDHGV--KP------DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 477

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
            A+N LI+G    G+   A E++  +   G+  D   +  +I +  + G   DA+   D 
Sbjct: 478 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 537

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
            +  G  P + ++  +M+     G+++ A RV  +MV  G++ N+ +   ++      G 
Sbjct: 538 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 597

Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           ++E L     M+Q G  P+     ++L                           Y  ++D
Sbjct: 598 IDEGLSLFREMLQRGIKPS-----TIL---------------------------YSIIID 625

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
            L  AG+T+ A     ++ E G   D  + + ++ GL +     +A  L + +R 
Sbjct: 626 GLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 680



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 215/473 (45%), Gaps = 12/473 (2%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           GK   A  +L  M + G     ++  +  +I+ + K+G V ++  +F  M Q G+   + 
Sbjct: 209 GKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV 268

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+++   + +      A+ +  +M+++ + P   TYN +++G+  + + + A+R F++M
Sbjct: 269 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 328

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           +   I  DVVT + ++    ++ K+ EA  +F  M  K   P V SY  M+ GY      
Sbjct: 329 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 388

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            D   +FD M    + P+  T+  L+    + G + +   +  EM +  + P D   +  
Sbjct: 389 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP-DVVTYRT 447

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++   C+ G ++ A +    MI   +  +   Y  LI+ FC      +A +L+ +++   
Sbjct: 448 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM--- 504

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
                 + + ++   ++ +I +LC  G+   A+  F   +  G+  D V ++ L+ G+  
Sbjct: 505 -----NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL 559

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G  + A  +   M   G+  +   Y  L+  Y + G   +  +    M++ G  P++ L
Sbjct: 560 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 619

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           +  +++ LF+ GR   A      M E G+  ++     +L  L      +EA+
Sbjct: 620 YSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 672



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/543 (21%), Positives = 241/543 (44%), Gaps = 13/543 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V +      +   A   F+ + + G+   D  T+  ++  L +   ++ A   L  M
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDLVTYNSVVHALCKARAMDKAEAFLRQM 293

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K V  +   +  LI  Y   G  +E+V++F  M++  +   V +   L   + + G+ 
Sbjct: 294 VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 353

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F+ M  +G  P   +YN+ML G+     L      F+ M   GI+ D  T+N +
Sbjct: 354 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 413

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  Y     +D+A  +F EM++  ++P V++Y T+I     + + DDA+  F++M    V
Sbjct: 414 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 473

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+   Y  L+ G C  G +++ ++++ E++   +   D   F  ++   CK G +  A 
Sbjct: 474 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM-HLDIVFFSSIINNLCKLGRVMDAQ 532

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++    + + +  +A  Y +L++ +C     ++A+++ D +V   I   P   +      
Sbjct: 533 NIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI--EPNVVV------ 584

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  ++   C  G+  +    FR+++++G+    + ++ +I G  + G    A      M 
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMT 644

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL-FRSVMESLFEDGRV 500
             G+  D   Y  ++   L K    D    L   +   +   + +   ++++ +F+  RV
Sbjct: 645 ESGIAMDICTYNIVLRG-LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 703

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
           + A  +  S+    +  N+   + ++  L+  G VEEA      M  +G  PN   L  V
Sbjct: 704 EEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 763

Query: 561 LSE 563
           + E
Sbjct: 764 VRE 766



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 185/397 (46%), Gaps = 10/397 (2%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G+  D   F VLI++Y   G++ +++ IF+ M+  GV+  V +Y  +   + R G+   A
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
              FN+M+ +G+ P ++ YN ++ GF     L  A     ++ + G+ LD+V ++++IN 
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 521

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +  ++ +A+ +F       + P  + Y+ ++ GY  V + + ALR+FD M S  ++PN
Sbjct: 522 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 581

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            V Y  L+ G C  G++ E   + REM++R I P    ++  ++    ++G    A    
Sbjct: 582 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPS-TILYSIIIDGLFQAGRTVPAKMKF 640

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             M    I  +   Y I++    K   +D AI L  +L    +         +   + N 
Sbjct: 641 HEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV--------KINIITLNT 692

Query: 386 MIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           MI  +    +  +A+  F  + + + V + V ++ +I    KEG  + A ++   M   G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
              ++     ++   L+K E   A   L  + E   S
Sbjct: 753 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 789



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 186/418 (44%), Gaps = 14/418 (3%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF-DE 256
           TY  +++   R  + + A   F ++    +   +I    +++G+   +R D+AL I    
Sbjct: 126 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHR 185

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKS 315
                  P+  +Y+ LL  LCD GK  +   +LR M E       N V +  ++    K 
Sbjct: 186 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 245

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G +N A D+ K M++  IP +   Y  ++   CKA   D+A   L ++V K ++  P + 
Sbjct: 246 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL--PNNW 303

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
                 +YN +I      GQ  +A   F+++ +  +L D V  + L+    K G    A 
Sbjct: 304 ------TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 357

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           ++   M  +G   D  +Y  ++  Y  KG   D     D M+ DG +P    F  ++++ 
Sbjct: 358 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 417

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
              G +  A  +   M + GVK ++     ++ AL   G +++A+ + + M+  G  P+ 
Sbjct: 418 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 477

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
             ++ L+      G  + A +L+   +     +D+  +  +++ L   G+ ++A +I 
Sbjct: 478 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 535



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 119/227 (52%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VGK+  A  +   M   G++ +  ++  L+  Y K G + E + +F  M Q G++ S   
Sbjct: 560 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 619

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  +   + + GR + AK  F++M   GI     TYN++L G F +   + AI  F++++
Sbjct: 620 YSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 679

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  + ++++T NTMI+G  + ++++EA+ LFA +    + P V++Y+ MI   +     +
Sbjct: 680 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVE 739

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           +A  +F  M++   +PN+     ++  L    ++V     L ++ ER
Sbjct: 740 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 786



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 15/305 (4%)

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           L+E FC+A+  D A   LD L+ +     P+     +  SY+ +++ LC  G++G+A+  
Sbjct: 165 LLEGFCEAKRTDEA---LDILLHRT----PELGCVPDVFSYSILLKSLCDQGKSGQADDL 217

Query: 403 FRQLMKKG-VLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
            R + + G V  P  VA+N +I G  KEG+ + A ++ K M +RG+P D   Y  ++ + 
Sbjct: 218 LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHAL 277

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            +      A+  L  M+     P +  + +++      G+ + A RV K M    +  ++
Sbjct: 278 CKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 337

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
             ++ ++ +L   G ++EA    D M   G  P+   ++ +L+  + KG  +    L D 
Sbjct: 338 VTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL 397

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEG 635
            LG     D  ++  ++ A    G  L+   I+F  M   GV  D  +   +IA L + G
Sbjct: 398 MLGDGIAPDFYTFNVLIKAYANCG-MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456

Query: 636 NTKQA 640
               A
Sbjct: 457 KMDDA 461


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 209/457 (45%), Gaps = 15/457 (3%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI  + + G  +++  + +I++Q G    V +Y+ L     + G    A +  ++M    
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---N 211

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TYN +L     S KL+ A+   +    +    DV+TY  +I    +   + +A 
Sbjct: 212 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           KL  EM+ K  +P V++Y  +I G     R D+A++  + M S+  +PN +T+  +L  +
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  G+ ++ +K+L +M+ +   P     F  L+   C+ G L  A D+L+ M        
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPS-VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 390

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
           +  Y  L+  FCK +  DRAI+ LD +V +            +  +YN ++  LC +G+ 
Sbjct: 391 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY--------PDIVTYNTLLTALCKDGKV 442

Query: 397 GKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             A     QL  KG   PV   +N +I G SK G  + A +++  M R+G+  D   Y  
Sbjct: 443 DVAVEILNQLSSKGC-SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 501

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           L+    R+G+  +A      +   G  P +  + S+M  L +  +   A   +  M+ K 
Sbjct: 502 LVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR 561

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
            K        ++E +   G  +EAL  ++ +   G V
Sbjct: 562 CKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 221/485 (45%), Gaps = 37/485 (7%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +LE   +F E M  RG   D++   ++I G+ R  K  +A  +   +++    P VI+Y 
Sbjct: 129 ELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYN 188

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I GY      D+AL++ D M   +V P+ VTY  +L  LCD+GK+ +  +VL   +++
Sbjct: 189 VLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 245

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P D   +  L+   CK   +  A  +L  M       +   Y +LI   CK    D 
Sbjct: 246 ECYP-DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304

Query: 356 AIKLLDKL---------VEKEIILRPQST----LDME--------------ASSYNPMIQ 388
           AIK L+ +         +   IILR   +    +D E                ++N +I 
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 364

Query: 389 HLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G  G+A +I  +  M     + +++N L+ G  KE   D A E + IM  RG   
Sbjct: 365 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 424

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  L+ +  + G+   A   L+ +   G SP    + +V++ L + G+ + A +++
Sbjct: 425 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
             M  KG+K ++   + ++  L   G V+EA+     +   G  PN   ++S++  L + 
Sbjct: 485 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 544

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
            +T  A+  L + + + C    A+Y  +++ +   G    A  +L ++  +G V   KSS
Sbjct: 545 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVK--KSS 602

Query: 625 DKLIA 629
            + +A
Sbjct: 603 AEQVA 607



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 160/316 (50%), Gaps = 3/316 (0%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  + + G+L+ A   L +MP  G Q +     +++ S    G   ++ K+ 
Sbjct: 285 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 344

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M + G   SV +++ L   + R+G    A     KM   G  P   +YN +L GF   
Sbjct: 345 SDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKE 404

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K++ AI + + M SRG   D+VTYNT++    +  K+D A ++  ++  K   P +I+Y
Sbjct: 405 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 464

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I G   V + + A+++ DEM+   +KP+ +TY++L+ GL   GK+ E  K   ++  
Sbjct: 465 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 524

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMY 353
             I P   +    +LG+ CKS   + A D L  MI +   PTEA  Y ILIE      + 
Sbjct: 525 LGIRPNAITYNSIMLGL-CKSRQTDRAIDFLAYMISKRCKPTEA-TYTILIEGIAYEGLA 582

Query: 354 DRAIKLLDKLVEKEII 369
             A+ LL++L  + ++
Sbjct: 583 KEALDLLNELCSRGLV 598



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 193/432 (44%), Gaps = 18/432 (4%)

Query: 25  LVYNVLHG--AKNSE--HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YNVL     K+ E  +ALQ    +  A     D  T+  ++  L   GKL  A  +L 
Sbjct: 185 ITYNVLISGYCKSGEIDNALQVLDRMNVA----PDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
              +K    D   + +LIE+  K+  V +++K+ D M+  G +  V +Y+ L   I + G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A ++ N M S G +P   T+N++L     + +   A +   DM  +G S  VVT+N
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +IN   R   +  A  +  +M      P  +SY  ++ G+   ++ D A+   D M S 
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+ VTY  LL  LC  GK+    ++L ++  +   P   +    + G+  K G    
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS-KVGKTER 479

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +L  M R  +  +   Y  L+    +    D AIK    L  + + +RP       A
Sbjct: 480 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL--EGLGIRPN------A 531

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKI 439
            +YN ++  LC + QT +A  F   ++ K      A +  LI G + EG    A +++  
Sbjct: 532 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 591

Query: 440 MGRRGVPRDADA 451
           +  RG+ + + A
Sbjct: 592 LCSRGLVKKSSA 603



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 180/397 (45%), Gaps = 16/397 (4%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           +D  +  + M      P+ +  T+L+ G C  GK  +   V+ E++E+     D   +  
Sbjct: 131 EDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVM-EILEQSGAVPDVITYNV 189

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   CKSG ++ A  VL    R+++  +   Y  ++   C +    +A+++LD+ ++KE
Sbjct: 190 LISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 246

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
                      +  +Y  +I+  C     G+A     ++  KG   D V +N LI G  K
Sbjct: 247 CY--------PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           EG  D A + +  M   G   +   +  ++ S    G   DA+  L  M+  G SP+   
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F  ++  L   G +  A  +++ M   G   N      +L        ++ A+  +D+M+
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
             G  P+   +++LL+ L + GK   AV++L+    + C   L +Y  V+D L   GKT 
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            A  +L ++  KG   D  +   L++GL++EG   +A
Sbjct: 479 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 515



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 86/181 (47%)

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
           +R GE  D    L+SM+  G  P      S++      G+ + A+ VM+ + + G   ++
Sbjct: 125 VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 184

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLG 579
                ++      G ++ AL  +D M  +  V  ++++L  L + GK   A+++LD  L 
Sbjct: 185 ITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
           ++C  D+ +Y  +++A         A  +L ++  KG   D  + + LI G+ +EG   +
Sbjct: 245 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304

Query: 640 A 640
           A
Sbjct: 305 A 305


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 143/590 (24%), Positives = 255/590 (43%), Gaps = 65/590 (11%)

Query: 1   MAERAWTTRLQNKIRALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
           +  R W    QN  R  + QF+   ++ ++   + ++  AL FFRW E      H  E+ 
Sbjct: 41  LTNRGWNLGSQNGYRIDLSQFNVMKILNDLFEESTDAALALYFFRWSEYCMGSKHTVESV 100

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             MI IL   G +NH    LL               ++  + G++G     +KI +   +
Sbjct: 101 CTMIHILVS-GNMNHKAMDLL-------------LHLISYNSGEEGWHNIFLKIHETHTK 146

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
             V  +V  Y  L    ++     +A +   KM    I P     N +L     S +L  
Sbjct: 147 RRVLETV--YGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNL 204

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A  F ++MKS+G+ L+    +  I+GY     +D   KL  EMK   I+P V++YT +I 
Sbjct: 205 AWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVID 264

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
               +    +A  I  +M    V  ++V+ ++++ G C  GK  E   VL    E +   
Sbjct: 265 SLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVL----EVFNLS 320

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            +  VF   +   C  G++  AA V + M  + +  +   Y  ++  +CK +    A+K 
Sbjct: 321 PNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKY 380

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
           L K++++ I  RP        ++Y  +I   C  G    AE  F++++ +G++ D V++N
Sbjct: 381 LGKMLKRGI--RPS------VATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYN 432

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L+ G+ K+G+   AFE++ +M   GV  D   Y  LI   +++G   +AK  LD +   
Sbjct: 433 TLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRR 492

Query: 479 GHSPASSLFRSVMESLFEDGRVQTA----------------------------SRVM--- 507
           G SP    F +++      G  + A                            +R M   
Sbjct: 493 GFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEA 552

Query: 508 ----KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
                 M++ G+K ++ L   ++      G++++A   + +M++ G +PN
Sbjct: 553 NVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPN 602



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 174/394 (44%), Gaps = 17/394 (4%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L ++  L  A  IL  M + GV  D      +++ Y K G  +E++   D+++   
Sbjct: 262 VIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAM---DVLEVFN 318

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  ++  +++    +   G  + A + F  M   G+ P   +Y  M+ G+     +  A+
Sbjct: 319 LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNAL 378

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           ++   M  RGI   V TY  +I+   +   M+ AE LF  M  + + P V+SY T++ GY
Sbjct: 379 KYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGY 438

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                   A  +   M+S  V P+ VTY  L+ GL   G + E + +L E+  R   P D
Sbjct: 439 GKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSP-D 497

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  ++G     G+   A  +   M    +  +      L+  +C+      A  L  
Sbjct: 498 VVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFH 557

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           K+++        + L  +   YN +I   C  G    A      +++ G++ + +  + L
Sbjct: 558 KMLD--------AGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHAL 609

Query: 421 IRGHSKEG--NP--DSAFEIVKIMGRRGVPRDAD 450
           + G+ K+   NP   +AF++ +++ + G+  + D
Sbjct: 610 VLGYEKKCVENPVERAAFKLQQLLLKYGIQAEDD 643



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 109/218 (50%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+   + G +  A  +   M  +G+  D   +  L+  YGKKG +Q++ ++  +M
Sbjct: 395 TYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMM 454

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +  GV   + +Y+ L   +++RG    AK   +++   G  P   T+  ++ GF      
Sbjct: 455 RSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNF 514

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A   F  M    +  DVVT + ++NGY R + M EA  LF +M +  ++  VI Y ++
Sbjct: 515 EEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSL 574

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           I G+ ++   DDA  +   M    + PN +T+ AL+ G
Sbjct: 575 IHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLG 612



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/462 (19%), Positives = 205/462 (44%), Gaps = 27/462 (5%)

Query: 188 KSRGISLDVVTYNTMINGY-NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           K+  + L +++YN+   G+ N F K+ E         ++ +  TV  Y  ++  YV    
Sbjct: 115 KAMDLLLHLISYNSGEEGWHNIFLKIHETHT------KRRVLETV--YGMLVNCYVKENM 166

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
              AL++  +M+  ++ P      +LL  L ++ ++      L+EM  + +   + S+  
Sbjct: 167 TQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGL-NASIIS 225

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
             +   C  G+++    +L  M  L I  +   Y I+I++ CK  +   A  +L K+ + 
Sbjct: 226 LFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQM 285

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGH 424
            + L        ++ S + ++   C  G++ +A      +++   L P    FN+ I   
Sbjct: 286 GVFL--------DSVSVSSVVDGYCKVGKSEEA----MDVLEVFNLSPNIFVFNSFISKL 333

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
             +GN   A ++ + M   G+  D  +Y  ++  Y +  + ++A   L  M++ G  P+ 
Sbjct: 334 CTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSV 393

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
           + +  +++S  + G ++ A  + + M+ +G+  ++     ++     +GH+++A   + +
Sbjct: 394 ATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSM 453

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M  +G  P+   ++ L+  L ++G    A  +LD    R    D+ ++  ++      G 
Sbjct: 454 MRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGN 513

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
              A+ + F + E     D  +   L+ G  +     +A++L
Sbjct: 514 FEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVL 555



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 8/198 (4%)

Query: 15  RALVPQFDHNLVYNVL---HGAKNS-EHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
             LVP     + YN L   +G K   + A +    +  AG+ + D  T+  +I  L + G
Sbjct: 422 EGLVPDV---VSYNTLMNGYGKKGHLQKAFELLSMMRSAGV-SPDLVTYNILIHGLIKRG 477

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            +N A+ IL ++ ++G   D   F  +I  +  KG  +E+  +F  M +  +E  V +  
Sbjct: 478 LVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCS 537

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
           AL     R      A   F+KML  G++     YN ++ GF     ++ A      M   
Sbjct: 538 ALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEH 597

Query: 191 GISLDVVTYNTMINGYNR 208
           GI  + +T++ ++ GY +
Sbjct: 598 GIMPNNITHHALVLGYEK 615



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 127/310 (40%), Gaps = 45/310 (14%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           YG+L+  + K  M   A+KL+ K+  + + + P           N +++ L  + Q   A
Sbjct: 154 YGMLVNCYVKENMTQVALKLICKM--RHLNIFPL------IGVCNSLLKALLESEQLNLA 205

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
             F +++  +G+ L+    +  I G+  +GN D+ ++++  M   G+  D  AY      
Sbjct: 206 WDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAY------ 259

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
                                          V++SL +   ++ A+ ++  M + GV  +
Sbjct: 260 -----------------------------TIVIDSLCKMSLLKEATSILFKMTQMGVFLD 290

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCL 578
              V+ +++     G  EEA+  +++   S ++  F+S +S L   G  + A K+     
Sbjct: 291 SVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMC 350

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
               I D  SY  ++          NA   L K++++G      +   LI    + GN +
Sbjct: 351 EMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNME 410

Query: 639 QADIL-SRMI 647
            A+ L  RMI
Sbjct: 411 MAEYLFQRMI 420


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 238/506 (47%), Gaps = 13/506 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R GKL     +      +GV+ D  +F  ++++Y + G + ++++++  M + G
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V +Y  L   + R GR + A   F ++L +G+EP+  TY+ ++ GF  S  L    
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             +  M  +G   DVV  + +ING +R   MDEA + F +  ++ +      +  +I G 
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGC 495

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             ++R  D L+++  M  + V P+ VTYT L+ GL + G++ E   +  +++++   P D
Sbjct: 496 FRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSP-D 554

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           + ++  L+   CK         + K M    I  +   Y +LI  F +    +  ++LL 
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELL- 613

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
               +EII   +  L+ +  +YN MI   C      KA   F +++K G   P  + F  
Sbjct: 614 ----REII---KYGLEPDIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTI 665

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI  + K+G  D A  I   M  RG   +   Y CLI+ Y +      A    + M+ D 
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            SP    +  +++ L + G ++ AS   +  + + +  ++     ++      G + EA+
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 540 GRIDLMMQSGSVPNFDSLLSVLSEKG 565
              D M+ +G +P+ D L   L+E G
Sbjct: 786 MLYDHMLVNGIMPD-DLLQKALAEYG 810



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/622 (21%), Positives = 263/622 (42%), Gaps = 72/622 (11%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++E +  S+ K+G V++ +     + + G+   +   + + K +    +  +A  +F+ M
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G  P   T++ ++  +   L+L+ A   +  M  +GI  D+V Y+ +ING  R  K+
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +E   LF+    + ++  V+ +++++  YV V     A+ ++  M    + PN VTY+ L
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GLC  G+++E   V  +++++ + P   + +  L+   CKS +L     +   M+R  
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLT-YSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL----------------RPQSTL 376
              +     +LI    +  M D A++   + V++ + L                R +  L
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505

Query: 377 DM-----------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
            M           +  +Y  +++ L   G+  +A   F QL+KKG   D + +  LI G 
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG----- 479
            K+ +P +  +I K+M   G+  D   Y  LI  + R+G   +    L  +I+ G     
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 480 ------------------------------HSPASSLFRSVMESLFEDGRVQTASRVMKS 509
                                           P +  F  ++++  +DGR+  A  +  S
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGK 566
           M+E+G + N+   + +++      + E A    + M+     PN  S   L+  L +KG 
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGL 745

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A       +GR  + D+ +Y  ++      G+   A  +   ++  G + D    D 
Sbjct: 746 MEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD----DL 801

Query: 627 LIAGLNQEG-NTKQADILSRMI 647
           L   L + G    QA I S + 
Sbjct: 802 LQKALAEYGFQDSQASIYSTVF 823



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 3/268 (1%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +++ L   G+L+ A  +   + KKG   D  ++  LI+ + KK      ++IF
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            +M+  G+   +  Y+ L  +  R G          +++  G+EP   TYN M+ G+  S
Sbjct: 579 KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY-CS 637

Query: 175 LKL-ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           LK+   AI+ FE +K      + +T+  +I+ Y +  +MD+A  +F+ M E+  EP +++
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y+ +I GY   E  + A  ++++M    V PN V+Y+ L+ GLC  G M E     +  +
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAI 757

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            R++ P D   +  L+   CK G L  A
Sbjct: 758 GRHLLP-DVIAYGILIRGYCKVGRLAEA 784



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 113/520 (21%), Positives = 219/520 (42%), Gaps = 45/520 (8%)

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LG+   V+S+  +  ++LR   +  A R F++M+ +             +G      LE 
Sbjct: 83  LGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQ-------------FG-----NLEV 124

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
              F    ++ G +   V Y+ +++ Y R   +D A   FA M +  +  +  + + M+ 
Sbjct: 125 LGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLD 183

Query: 240 GYVAVERADDALRIFDEM-KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL---REMVER 295
             +  +R D  L  ++EM K   V      + + L       K  EV+K L   R +VER
Sbjct: 184 LLIDSDRIDVILENYEEMCKGLGVY--EFVFNSFL-------KRGEVEKGLNFHRALVER 234

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            + PK      K+L   C    +  A+D    M+R         +  LI  +CK    D 
Sbjct: 235 GLVPKIVDC-NKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDE 293

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A  L + ++EK I+  P   +      Y+ +I  L   G+  +    F   + +GV +D 
Sbjct: 294 AFSLYNLMIEKGIV--PDLVI------YSILINGLFRAGKLEEGNSLFSMALARGVKMDV 345

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V F++++  + + G+   A E+   M + G+  +   Y  LI    R G   +A      
Sbjct: 346 VIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQ 405

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           +++ G  P+   + S+++   +   ++    +   M+ KG   ++ + + ++  L  +G 
Sbjct: 406 ILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGM 465

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           ++EAL      ++ G   N   F++L+       +T   +K+         I D+ +Y  
Sbjct: 466 MDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTV 525

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           ++  L   G+   A ++ F++++KG   D      LI G 
Sbjct: 526 LVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 234/507 (46%), Gaps = 13/507 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +   I SY K G++ +++K FD M +         Y+    +++R+ R+ +A++Y+++M+
Sbjct: 12  YRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMI 71

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G      TY+  + G           +  EDM   G   D+  YN  +N      ++D
Sbjct: 72  PQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLD 131

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A  +   M EK  EP +++YT +I G     R D A+ I+  M      P+     AL+
Sbjct: 132 VALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALV 191

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC  GK V++   L     R       S++  L+   C++G ++ A  ++  M R   
Sbjct: 192 LGLCHDGK-VDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGC 250

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y +L+   C   + + A  L+ K+         +S ++ +  SYN +++ LC  
Sbjct: 251 EPDLVTYNVLLNYCCDELLLEEAENLMKKM--------ERSGVEPDVYSYNELLKGLCKA 302

Query: 394 GQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  KA +     M+ KG+ D V++N +I+      +   A+++ + MG +G+  D   +
Sbjct: 303 NRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTF 362

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI+++LR+G    AK  LD M   G  P   L+ ++++ L + G++  A  V   MVE
Sbjct: 363 TILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVE 422

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G+  ++     ++  L     V EA+   + M   G  P+   F  ++  L  + K   
Sbjct: 423 SGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSV 482

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDAL 596
           A ++ D  + +   +D A  E +++A+
Sbjct: 483 ACRVWDQMMEKGFTLDGAVSETLVNAI 509



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 192/452 (42%), Gaps = 21/452 (4%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + Y   I+ Y +   +D+A K F EM + N     I Y   I   V   R D A + +D 
Sbjct: 10  LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER--YIPPKDNSVFMKLLGVQCK 314
           M       N+ TY+  + GLC     V ++K+L +M +R  Y+P  D   +   L + C 
Sbjct: 70  MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDM-DRLGYVP--DIWAYNIYLNLLCC 126

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
              L+ A  V++ M+      +   Y I+I   C+A  +D A+++   +V K        
Sbjct: 127 ENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRK-------- 178

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSA 433
               +  +   ++  LCH+G+   A E+    +  +       +N+LI G  + G  D A
Sbjct: 179 GFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKA 238

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             I+  M R G   D   Y  L+     +    +A+  +  M   G  P    +  +++ 
Sbjct: 239 QSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKG 298

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSV 551
           L +  R+  A  +M + +E   K   D+V+   I++AL    H + A    + M   G  
Sbjct: 299 LCKANRLDKAYMMMVNKME--AKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGIT 356

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P+   F  L+     +G +  A KLLD   G   + D   Y  ++D L   GK   A+S+
Sbjct: 357 PDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSV 416

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              ++E G   D  S + LI GL +     +A
Sbjct: 417 FCDMVESGITPDVVSYNALINGLCRASRVSEA 448



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/483 (20%), Positives = 202/483 (41%), Gaps = 15/483 (3%)

Query: 18  VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           V   D+N    VL      + A Q++  +   G F+ +  T+ + I  L +V        
Sbjct: 42  VFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQG-FSLNSFTYSRFISGLCKVKNFVLIEK 100

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L DM + G   D   + + +     +  +  ++ +   M + G E  + +Y  +   + 
Sbjct: 101 LLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLC 160

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R GR+  A   +  M+ +G  P       ++ G     K++ A           I     
Sbjct: 161 RAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKS 220

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            YN++ING+ +   +D+A+ + + M+    EP +++Y  ++         ++A  +  +M
Sbjct: 221 IYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKM 280

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQCKS 315
           +   V+P+  +Y  LL GLC A ++    K    MV +       D   +  ++   C +
Sbjct: 281 ERSGVEPDVYSYNELLKGLCKANRL---DKAYMMMVNKMEAKGLCDVVSYNTIIKALCTA 337

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
            H   A  + + M    I  +   + ILI+ F +    + A KLLD++    + L P   
Sbjct: 338 SHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMT--GLGLLPDRV 395

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
           L      Y  ++ HLC  G+ G A   F  +++ G+  D V++N LI G  +      A 
Sbjct: 396 L------YTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAM 449

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            + + M   G   D   +  +I   + + + + A    D M+E G +   ++  +++ ++
Sbjct: 450 HLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAI 509

Query: 495 FED 497
             +
Sbjct: 510 HSN 512



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 1/191 (0%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           + L     +N +   L  A +++ A + F  +   G+   D  T   +I+   R G  N 
Sbjct: 319 KGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGI-TPDVVTFTILIKAFLREGSSNI 377

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A+ +L  M   G+  D  ++  +++   K G +  +  +F  M + G+   V SY+AL  
Sbjct: 378 AKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALIN 437

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + R  R   A   +  M + G  P   T+ +++ G     KL  A R ++ M  +G +L
Sbjct: 438 GLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTL 497

Query: 195 DVVTYNTMING 205
           D     T++N 
Sbjct: 498 DGAVSETLVNA 508


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 151/652 (23%), Positives = 273/652 (41%), Gaps = 107/652 (16%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR----------- 141
           +F++L++++ ++G+ + ++ +FD M ++G    ++S   L   ++++G            
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217

Query: 142 ---------YM---------------MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
                    YM               +A     KM+ EG+EP   TYN ++ G+      
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDF 277

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS---Y 234
           E   R    M  RG+S +VVT   ++ GY +  KMDEAEKL  E++E   E  V+    Y
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEED--ELLVVDERVY 335

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ GY  + R +DA+RI DEM    +K N V    L+ G C  G++ E ++V   MV+
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D   +  LL   C+ G ++ A  + + M+   I      Y  +I+       YD
Sbjct: 396 WNLKP-DCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYD 454

Query: 355 RAIKLLDKLVEKEIILRPQSTLDM---------------------------EASSYNPMI 387
            A+ L   +VE+ +     S   M                              ++N MI
Sbjct: 455 DALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMI 514

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             LC  G+  +A   F ++ + G+  D + +  L  G+ K GN   AF+I  +M R+ + 
Sbjct: 515 SGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMS 574

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
              + Y  LI+   +  +  D    L  M   G SP    + +++    ++ ++  A  +
Sbjct: 575 ASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHL 634

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ------------------- 547
              M+E+G   N+ + +KI+ +L     + EA   +D M+                    
Sbjct: 635 YFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDL 694

Query: 548 ----------------SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
                             S+ N   ++  +  L + GK   A  +L   + R  + D  +
Sbjct: 695 TLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFT 754

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           Y  ++ A   +G    A+ +  +++EKG + +    + LI GL + GN  +A
Sbjct: 755 YCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRA 806



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/540 (22%), Positives = 242/540 (44%), Gaps = 15/540 (2%)

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +F + K+ G    V  +D L K    RG    A   F++M   G  P   + + +L    
Sbjct: 145 VFSVYKEFGFCSGV--FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLV 202

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
              +   A+  F+ +   GI  DV   + ++N + +  ++D A ++  +M ++ +EP V+
Sbjct: 203 QKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVV 262

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y  ++ GYV     +   R+   M    V  N VT T L+ G C  GKM E +K+LRE+
Sbjct: 263 TYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREV 322

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
            E  +   D  V+  L+   C+ G +  A  +   M+R+ +         LI+ +CK   
Sbjct: 323 EEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQ 382

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
              A ++   +V+    L+P      +  SYN ++   C  G+  KA +   +++  G+ 
Sbjct: 383 VCEAERVFVGMVDWN--LKP------DCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGIT 434

Query: 413 DP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
              V +N +I+G    G+ D A  +  +M  RGV  +  +   +++ + + G+   A   
Sbjct: 435 PTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMML 494

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
              ++  G + ++  F +++  L + G++  A  V   M E G+  +      + +    
Sbjct: 495 WKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCK 554

Query: 532 RGHVEEAL---GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
            G+V+EA    G ++    S S+  ++SL+  L +  K      LL     R    ++ +
Sbjct: 555 NGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVT 614

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           Y  ++       K   A+ + F+++E+G   +     K+++ L ++    +A  IL +M+
Sbjct: 615 YGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKML 674



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 207/493 (41%), Gaps = 66/493 (13%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           DE ++ VL++ Y + G ++++V+I D M ++G++ ++   + L K   + G+   A+R F
Sbjct: 331 DERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVF 390

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
             M+   ++P  ++YN +L G+    K+  A    E+M   GI+  VVTYNT+I G    
Sbjct: 391 VGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDV 450

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
              D+A  L+  M E+ + P  IS  TM+  +  +  +D A+ ++ E+       + V +
Sbjct: 451 GSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAF 510

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH------------ 317
             ++ GLC  GK++E   V   M E  + P D   +  L    CK+G+            
Sbjct: 511 NTMISGLCKMGKLMEAGAVFDRMKELGLSP-DEITYRTLSDGYCKNGNVQEAFQIKGVME 569

Query: 318 -----------------------LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
                                  LN   D+L  M    +      YG LI  +C  +  D
Sbjct: 570 RQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLD 629

Query: 355 RAIKLL-------------------------DKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           +A  L                          D++ E  +IL      D+ A  +N     
Sbjct: 630 KAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA-VHNKCSDK 688

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDP----VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           L  N  T +A+     L K  + +     + +N  I G  K G  D A  ++ ++  RG 
Sbjct: 689 LVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGF 748

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  LI +    G   +A    D M+E G  P  +++ +++  L + G +  A R
Sbjct: 749 LPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQR 808

Query: 506 VMKSMVEKGVKEN 518
           +   + +KG+  N
Sbjct: 809 LFYKLYQKGLVPN 821



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 36/301 (11%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N + A Q    +ER  + +   E +  +I+ L ++ KLN    +L++M  +G+  +   +
Sbjct: 557 NVQEAFQIKGVMERQAM-SASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTY 615

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             LI  +  +  + ++  ++  M + G   +V     +   + R  R   A    +KML 
Sbjct: 616 GTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLD 675

Query: 155 EGIEPTRH-----------------------------------TYNVMLWGFFLSLKLET 179
             I    +                                    YN+ + G   S KL+ 
Sbjct: 676 FDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDE 735

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A      + SRG   D  TY T+I+  +    +DEA KL  EM EK + P +  Y  +I 
Sbjct: 736 ARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALIN 795

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G   +   D A R+F ++    + PNAVTY  L+   C  G + +  ++  +M E  I  
Sbjct: 796 GLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIST 855

Query: 300 K 300
           +
Sbjct: 856 R 856



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 68/135 (50%)

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           I+ L + GKL+ AR +L  +  +G   D   +  LI +    G V E+ K+ D M + G+
Sbjct: 724 IDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGL 783

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             ++  Y+AL   + + G    A+R F K+  +G+ P   TYN+++  +     L+ A R
Sbjct: 784 IPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASR 843

Query: 183 FFEDMKSRGISLDVV 197
             E M   GIS  ++
Sbjct: 844 LREKMTEEGISTRII 858



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++ + I+   K G + E+  +  ++   G      +Y  L       G    A +  ++M
Sbjct: 719 VYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEM 778

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L +G+ P    YN ++ G      ++ A R F  +  +G+  + VTYN +I  Y R   +
Sbjct: 779 LEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDL 838

Query: 213 DEAEKLFAEMKEKNIEPTVI 232
           D+A +L  +M E+ I   +I
Sbjct: 839 DKASRLREKMTEEGISTRII 858


>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 185/376 (49%), Gaps = 11/376 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI ILGR+G++  A+ +      +G       F  LI +YG+ G   E++K+F+ MK  G
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250

Query: 122 VERSVKSYDALFKLILRRG-RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           ++ ++ +Y+A+     + G  +  A   F++ML  G++P R T+N +L         E A
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
              F +M  RGI  D+ TYNT+++   +  +MD A ++ +EM  K+I P V++Y+T+I G
Sbjct: 311 RNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDG 370

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y    R D+AL +F+EMK   +  + V+Y  LL      G+  E   V +EM    I  K
Sbjct: 371 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGI-KK 429

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  LLG   K G       V + M    I      Y  LI+ + K  +Y  A+++ 
Sbjct: 430 DAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVF 489

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
            +          ++ L  +   Y+ +I  LC NG    A  F  ++ K+G+  + V +N+
Sbjct: 490 REF--------KKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNS 541

Query: 420 LIRGHSKEGNPDSAFE 435
           +I    + G+ +   +
Sbjct: 542 IIDAFGRSGSAECVID 557



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 181/388 (46%), Gaps = 21/388 (5%)

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + MI+   R  +++ A+ +F     +    TV +++ +I  Y      D+A+++F+ MKS
Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248

Query: 260 FDVKPNAVTYTALLPGLCDAG-KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
             +KPN VTY A++      G       ++  EM+   + P D   F  LL V  + G  
Sbjct: 249 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQP-DRITFNSLLAVCGRGGLW 307

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            AA ++   M+   I  +   Y  L++  CK    D A +++ ++  K I+  P      
Sbjct: 308 EAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIM--PNVV--- 362

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
              +Y+ +I      G+  +A   F ++    + LD V++N L+  ++K G  + A  + 
Sbjct: 363 ---TYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVC 419

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           K M   G+ +DA  Y  L+  Y ++G+  + K   + M  +   P    + ++++   + 
Sbjct: 420 KEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKG 479

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
           G  Q A  V +   + G+K ++ L + +++AL   G VE A+  +D M + G  PN  + 
Sbjct: 480 GLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTY 539

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIID 585
            S++   G++ +A          +C+ID
Sbjct: 540 NSIIDAFGRSGSA----------ECVID 557



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/440 (22%), Positives = 203/440 (46%), Gaps = 16/440 (3%)

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV--KSYDALFKLILRRGRYMMAKRYF 149
           D +  L+   G +G   ++++ F+   +    R+   K   A+  ++ R G+  +AK  F
Sbjct: 149 DDYTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVF 208

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
              L+EG   T + ++ ++  +  S   + AI+ FE MKS G+  ++VTYN +I+   + 
Sbjct: 209 ETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKG 268

Query: 210 K-KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
               + A ++F EM    ++P  I++ +++         + A  +F EM    ++ +  T
Sbjct: 269 GVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFT 328

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  LL  +C  G+M    +++ EM  ++I P +   +  ++    K+G L+ A ++   M
Sbjct: 329 YNTLLDAVCKGGQMDLAFQIMSEMPRKHIMP-NVVTYSTVIDGYAKAGRLDEALNLFNEM 387

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
              SI  +   Y  L+  + K   ++ A+ +  ++          S +  +A +YN ++ 
Sbjct: 388 KFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM--------ESSGIKKDAVTYNALLG 439

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
                G+  + +  F ++  + +  + + ++ LI  +SK G    A E+ +   + G+  
Sbjct: 440 GYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKA 499

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  LI++  + G    A + LD M ++G  P    + S++++    GR  +A  V+
Sbjct: 500 DVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAF---GRSGSAECVI 556

Query: 508 KSMVEKGVKENLDLVAKILE 527
               E  V +      K++E
Sbjct: 557 DPPYETNVSKMSSSSLKVVE 576



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 132/268 (49%), Gaps = 1/268 (0%)

Query: 32  GAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE 91
           G  +   A + F  + R G+   DR T   ++ + GR G    AR +  +M  +G++ D 
Sbjct: 268 GGVDFNRAAEIFDEMLRNGV-QPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDI 326

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
             +  L+++  K G +  + +I   M +  +  +V +Y  +     + GR   A   FN+
Sbjct: 327 FTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNE 386

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M    I   R +YN +L  +    + E A+   ++M+S GI  D VTYN ++ GY +  K
Sbjct: 387 MKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGK 446

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
            +E +++F EMK + I P +++Y+T+I  Y       +A+ +F E K   +K + V Y+A
Sbjct: 447 YEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSA 506

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPP 299
           L+  LC  G +      L EM +  I P
Sbjct: 507 LIDALCKNGLVESAVSFLDEMTKEGIRP 534



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 122/225 (54%), Gaps = 4/225 (1%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +++ + + G+++ A  I+ +MP+K +  +   +  +I+ Y K G + E++ +F+ M
Sbjct: 328 TYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEM 387

Query: 118 K--QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           K   +G++R   SY+ L  +  + GR+  A     +M S GI+    TYN +L G+    
Sbjct: 388 KFASIGLDRV--SYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQG 445

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           K E   R FE+MK+  I  +++TY+T+I+ Y++     EA ++F E K+  ++  V+ Y+
Sbjct: 446 KYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYS 505

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
            +I         + A+   DEM    ++PN VTY +++     +G
Sbjct: 506 ALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 550



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 125/285 (43%), Gaps = 30/285 (10%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + AL  F  ++ A +   DR ++  ++ I  ++G+   A  +  +M   G++ D   +  
Sbjct: 378 DEALNLFNEMKFASI-GLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNA 436

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+  YGK+G  +E  ++F+ MK   +  ++ +Y  L  +  + G Y  A   F +    G
Sbjct: 437 LLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG 496

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR-------- 208
           ++     Y+ ++     +  +E+A+ F ++M   GI  +VVTYN++I+ + R        
Sbjct: 497 LKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVI 556

Query: 209 -------FKKMDEAE-KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA---------- 250
                    KM  +  K+  +  E  +     +    I G +A E+   A          
Sbjct: 557 DPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEI 616

Query: 251 ---LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
              L +F +M   D+KPN VT++A+L          +   +L E+
Sbjct: 617 LCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEEL 661



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 4/184 (2%)

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           R G+   AK   ++ + +G+      F +++ +    G    A +V ++M   G+K NL 
Sbjct: 197 RLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLV 256

Query: 521 LVAKILEALLMRG-HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
               +++A    G     A    D M+++G  P+   F+SLL+V    G   AA  L   
Sbjct: 257 TYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSE 316

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
            L R    D+ +Y  +LDA+   G+   A+ I+ ++  K  + +  +   +I G  + G 
Sbjct: 317 MLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGR 376

Query: 637 TKQA 640
             +A
Sbjct: 377 LDEA 380


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 203/430 (47%), Gaps = 10/430 (2%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+  +  L  +I +  RY +    F +M   GI P   T N+++    LS +   A  F 
Sbjct: 82  SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
             M   G   D+VT+ +++NGY  + ++++A  LF ++     +P V++YTT+I+     
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
              + A+ +F++M +   +PN VTY AL+ GLC+ G+  +   +LR+M++R I P +   
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP-NVIT 260

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           F  L+    K G L  A ++   MI++S+  +   YG LI   C   + D A ++   L+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF-YLM 319

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
           E+     P   +      Y  +I   C + +       F ++ +KGV+ + + +  LI+G
Sbjct: 320 ERNGCY-PNEVI------YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
           +   G PD A E+   M  R  P D   Y  L++     G+   A    + M +      
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              +  +++ + + G+V+ A  +  S+  KG+K N+     ++     RG + EA     
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492

Query: 544 LMMQSGSVPN 553
            M + G +PN
Sbjct: 493 KMKEDGFLPN 502



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 188/406 (46%), Gaps = 29/406 (7%)

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           + +F+ M+ LG+   + + + +   +    +   A  +  KM+  G EP   T+  +L G
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           +    ++E AI  F+ +   G   +VVTY T+I    + + ++ A +LF +M      P 
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V++Y  ++ G   + R  DA  +  +M    ++PN +T+TAL+      GK++E +++  
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            M++  + P D   +  L+   C  G L+ A  +   M R         Y  LI  FCK+
Sbjct: 283 VMIQMSVYP-DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341

Query: 351 EMYDRAIKLLDKLVEKEIIL----------------RP---QSTLDMEAS--------SY 383
           +  +  +K+  ++ +K ++                 RP   Q   +  +S        +Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N ++  LC NG+  KA + F  + K+ + ++ V +  +I+G  K G  + AF++   +  
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           +G+  +   Y  +I  + R+G   +A +    M EDG  P  S+++
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 172/379 (45%), Gaps = 10/379 (2%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A C L  M K G + D   F  L+  Y     +++++ +FD +  +G + +V +Y  L +
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + +      A   FN+M + G  P   TYN ++ G     +   A     DM  R I  
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           +V+T+  +I+ + +  K+ EA++L+  M + ++ P V +Y ++I G       D+A ++F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
             M+     PN V YT L+ G C + ++ +  K+  EM ++ +   +   +  L+   C 
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV-VANTITYTVLIQGYCL 375

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G  + A +V   M     P +   Y +L++  C     ++A+ + + + ++E       
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE------- 428

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
            +D+   +Y  +IQ +C  G+   A   F  L  KG+  + + +  +I G  + G    A
Sbjct: 429 -MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487

Query: 434 FEIVKIMGRRGVPRDADAY 452
             + K M   G   +   Y
Sbjct: 488 DSLFKKMKEDGFLPNESVY 506



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 6/331 (1%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A+  F  +   G F  +  T+  +I  L +   LNHA  +   M   G + +   +  
Sbjct: 170 EDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+    + G   ++  +   M +  +E +V ++ AL    ++ G+ M AK  +N M+   
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TY  ++ G  +   L+ A + F  M+  G   + V Y T+I+G+ + K++++  
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           K+F EM +K +    I+YT +I+GY  V R D A  +F++M S    P+  TY  LL GL
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ--CKSGHLNAAADVLKAMIRLSIP 334
           C  GK+ +   +   M +R +   D ++    + +Q  CK G +  A D+  ++    + 
Sbjct: 409 CCNGKVEKALMIFEYMRKREM---DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
                Y  +I  FC+  +   A  L  K+ E
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKE 496



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 147/295 (49%), Gaps = 2/295 (0%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           ++  HA++ F  +   G    +  T+  ++  L  +G+   A  +L DM K+ ++ +   
Sbjct: 202 RHLNHAVELFNQMGTNGS-RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI+++ K G + E+ +++++M Q+ V   V +Y +L   +   G    A++ F  M 
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P    Y  ++ GF  S ++E  ++ F +M  +G+  + +TY  +I GY    + D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A+++F +M  +   P + +Y  ++ G     + + AL IF+ M+  ++  N VTYT ++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
            G+C  GK+ +   +   +  + + P +   +  ++   C+ G ++ A  + K M
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKP-NVITYTTMISGFCRRGLIHEADSLFKKM 494



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 111/215 (51%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L   G L+ AR +   M + G   +E ++  LI  + K   V++ +KIF
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M Q GV  +  +Y  L +     GR  +A+  FN+M S    P   TYNV+L G   +
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K+E A+  FE M+ R + +++VTY  +I G  +  K+++A  LF  +  K ++P VI+Y
Sbjct: 412 GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITY 471

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
           TTMI G+       +A  +F +MK     PN   Y
Sbjct: 472 TTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/466 (20%), Positives = 192/466 (41%), Gaps = 25/466 (5%)

Query: 193 SLDVVTYNTMINGYNRFKKM----------DEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
           SL +  +   I  ++ ++K+          ++A  LF  M      P++I +T ++    
Sbjct: 35  SLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIA 94

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
            + R D  + +F++M+   + P   T   ++  +C + +       L +M++    P D 
Sbjct: 95  KMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEP-DL 153

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             F  LL   C    +  A  +   ++ +        Y  LI   CK    + A++L ++
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
           +       RP         +YN ++  LC  G+ G A    R +MK+ + +P  + F  L
Sbjct: 214 MGTNGS--RPN------VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI-EPNVITFTAL 264

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I    K G    A E+  +M +  V  D   Y  LI      G   +A+     M  +G 
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P   ++ +++    +  RV+   ++   M +KGV  N      +++   + G  + A  
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
             + M    + P+   ++ LL  L   GK   A+ + ++   R+  I++ +Y  ++  + 
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
             GK  +A+ +   +  KG   +  +   +I+G  + G   +AD L
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 211/441 (47%), Gaps = 16/441 (3%)

Query: 79  LLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           LLD M + G+  D  +F +LI +Y  +G V +++ +F  M+Q G+  +  +Y A+  ++ 
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A  YF +M+ EG+ P    YN ++ G     K E A     +M  RGI L+ +
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +N++I+ + +  ++ E+EKLF  M    ++P VI+Y T+I GY    + D+A+++   M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  +KPN VTY+ L+ G C   +M +   + +EM    + P   +  + L G+  ++  
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF-QTRR 596

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             AA ++   +       E   Y I++   CK ++ D A+++   L   +        L 
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD--------LK 648

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
           +EA ++N MI  L   G+  +A+  F      G++ +   +  +      +G  +   ++
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G   D+     ++   L++GE   A T L SMI++ H    +   S+   L  
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLS 767

Query: 497 DGRVQTASRVM----KSMVEK 513
            G+ Q   R +    KS +E 
Sbjct: 768 GGKYQEYYRFLPEKYKSFIES 788



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 141/569 (24%), Positives = 264/569 (46%), Gaps = 21/569 (3%)

Query: 39  ALQFFRWVERAGL--FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           A+  +  + RAG      D  T+  +I    R G+L+     L ++ KKG + D   F  
Sbjct: 68  AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127

Query: 97  LIESYGKKGIVQESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           L++         +++ I    M +LG   +V SY+ L K +    R   A    + M  +
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187

Query: 156 ---GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
              G  P   +Y  ++ GFF     + A   + +M  RGI  DVVTYN++I    + + M
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D+A ++   M +  + P  ++Y +++ GY +  +  +A+    +M+S  V+P+ VTY+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  G+ +E +K+   M +R + P+  +    L G   K G L     +L  M+R  
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK-GALVEMHGLLDLMVRNG 366

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I  +   + ILI  +      D+A+ +  K+         Q  L+  A +Y  +I  LC 
Sbjct: 367 IHPDHYVFSILICAYANQGKVDQAMLVFSKM--------RQQGLNPNAVTYGAVIGILCK 418

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           +G+   A ++F Q++ +G L P  + +N+LI G       + A E++  M  RG+  +  
Sbjct: 419 SGRVEDAMLYFEQMIDEG-LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +  +I+S+ ++G   +++   + M+  G  P    + +++      G++  A +++  M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
           V  G+K N    + ++        +E+AL     M  SG  P+   ++ +L  L +  +T
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
            AA +L          I+L++Y  +L  L
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGL 626



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/515 (23%), Positives = 235/515 (45%), Gaps = 35/515 (6%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L +   ++ A  +L  M K GV  D   +  ++  Y   G  +E++   
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  GVE  V +Y  L   + + GR M A++ F+ M   G++P   TY  +L G+   
Sbjct: 290 KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK 349

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L       + M   GI  D   ++ +I  Y    K+D+A  +F++M+++ + P  ++Y
Sbjct: 350 GALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTY 409

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I       R +DA+  F++M    + P  + Y +L+ GLC   K    ++++ EM++
Sbjct: 410 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 469

Query: 295 RYIPPKDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           R I    N++F   ++   CK G +  +  + + M+R+ +      Y  LI  +C A   
Sbjct: 470 RGICL--NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527

Query: 354 DRAIKLLDKLVEKEIILRPQ----STL------------------DMEAS-------SYN 384
           D A+KLL  +V   + L+P     STL                  +ME+S       +YN
Sbjct: 528 DEAMKLLSGMV--SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            ++Q L    +T  A+  + ++ + G  ++   +N ++ G  K    D A ++ + +   
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
            +  +A  +  +I++ L+ G   +AK    +   +G  P    +R + E++   G ++  
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 705

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            ++  SM + G   +  ++  I+  LL RG +  A
Sbjct: 706 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 225/494 (45%), Gaps = 15/494 (3%)

Query: 25  LVYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN +LHG  +S   + A+ F + +   G+   D  T+  +++ L + G+   AR I  
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGV-EPDVVTYSLLMDYLCKNGRCMEARKIFD 325

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M K+G++ +   +  L++ Y  KG + E   + D+M + G+      +  L      +G
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQG 385

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A   F+KM  +G+ P   TY  ++     S ++E A+ +FE M   G+S   + YN
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++I+G     K + AE+L  EM ++ I    I + ++I  +    R  ++ ++F+ M   
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            VKPN +TY  L+ G C AGKM E  K+L  MV   + P +   +  L+   CK   +  
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP-NTVTYSTLINGYCKISRMED 564

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  + K M    +  +   Y I+++   +      A +L  ++ E        S   +E 
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE--------SGTQIEL 616

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           S+YN ++  LC N  T  A   F+ L    + L+   FN +I    K G  D A ++   
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
               G+  +   Y  + E+ + +G   +      SM ++G +  S +   ++  L + G 
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 500 VQTASRVMKSMVEK 513
           +  A   +  + EK
Sbjct: 737 ITRAGTYLSMIDEK 750



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 208/465 (44%), Gaps = 18/465 (3%)

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           ++ D+ TY  +I    R  ++D        + +K      I++T ++KG  A +R  DA+
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 252 RI-FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY--IPPKDNSVFMKL 308
            I    M      PN  +Y  LL GLCD  +  E  ++L  M +      P D   +  +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +    K G  + A      M+   I  +   Y  +I   CKA+  D+A+++L+ +V+  +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           +  P      +  +YN ++   C +GQ  +A  F +++   GV  D V ++ L+    K 
Sbjct: 263 M--P------DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G    A +I   M +RG+  +   Y  L++ Y  KG   +    LD M+ +G  P   +F
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++ +    G+V  A  V   M ++G+  N      ++  L   G VE+A+   + M+ 
Sbjct: 375 SILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  P    ++SL+  L    K   A +L+   L R   ++   +  ++D+    G+ + 
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494

Query: 605 AYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           +   LF++M + GV  +  + + LI G    G   +A  +LS M+
Sbjct: 495 SEK-LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 174/396 (43%), Gaps = 13/396 (3%)

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           +V P+  TY  L+   C AG++      L  ++++     D   F  LL   C     + 
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSD 140

Query: 321 AAD-VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           A D VL+ M  L        Y IL++  C       A++LL  + +      P   +   
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVV--- 197

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             SY  +I      G + KA   + +++ +G+L D V +N++I    K    D A E++ 
Sbjct: 198 --SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M + GV  D   Y  ++  Y   G+P +A   L  M  DG  P    +  +M+ L ++G
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           R   A ++  SM ++G+K  +     +L+    +G + E  G +DLM+++G  P+   F 
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            L+   + +GK   A+ +      +    +  +Y  V+  L  +G+  +A     +++++
Sbjct: 376 ILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQAD--ILSRMIRG 649
           G        + LI GL      ++A+  IL  + RG
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 205/435 (47%), Gaps = 10/435 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  +G++     + VL+ S  K G + E+V +   M+ +G++  + +Y  L   + +RG 
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   + +M S+ I P     + ++ G F    +  A  +F+ +    ++ +++ YN 
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 520

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           MI+GY +   + EA + + ++ EK I PT++++ ++I G+    +  +A+++ D +K   
Sbjct: 521 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG 580

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P +VTYT L+ G C+ G M  +  +L EM  + I P   +  + + G+ CK G L+ +
Sbjct: 581 LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL-CKEGRLHES 639

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +LK M    +  +   Y  +I++FCKA    +A +L ++++        Q +L     
Sbjct: 640 VQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML--------QHSLQPSPV 691

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +I  LC  G    A+     L  + + L  VA+  +I+ H  +G+  +A      M
Sbjct: 692 TYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQM 751

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             RG       Y  +I    ++    DAK     M+  G  P   +   ++ +    G  
Sbjct: 752 VERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDP 811

Query: 501 QTASRVMKSMVEKGV 515
            +   +   M++ G+
Sbjct: 812 NSVFEIFAMMIKCGL 826



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/550 (24%), Positives = 259/550 (47%), Gaps = 33/550 (6%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER---SVKSYDALFKLIL 137
           ++   GV  +E    +LI+   ++  +Q++V     +++ G E    SV S++AL     
Sbjct: 225 EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTF---LRETGGEEFGPSVVSFNALMSGFC 281

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G   +AK +F  M+  G+ P  ++YN++L G  ++  +E A+ F  DM++ G+  D+V
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN + NG+     +  A K+   M    + P +++YT +I G+  +   +++ ++ ++M
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  +K + VTYT LL  LC +G++ E   +L EM    + P D   +  L+   CK G 
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKP-DLLTYSVLIHGLCKRGA 460

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENF------CKAEMYDRAIKLLDKLVEKEIILR 371
           +  A ++ + M    I   +     +I          +A+MY  ++   D  V +EIIL 
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSD--VAEEIIL- 517

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGN 429
                      YN MI      G  G+A   ++Q+++KG+  P  V FN+LI G  K+G 
Sbjct: 518 -----------YNIMIDGYAKLGNIGEAVRSYKQIIEKGI-SPTIVTFNSLIYGFCKKGK 565

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
              A +++  +   G+   +  Y  L+  Y  +G+       L  M      P    +  
Sbjct: 566 LAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV 625

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           V++ L ++GR+  + +++K M  +G+  +      ++++      +++A    + M+Q  
Sbjct: 626 VVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHS 685

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
             P+   ++ L++ L   G    A +LL     +   +   +Y  ++ A  A G   NA 
Sbjct: 686 LQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNAL 745

Query: 607 SILFKIMEKG 616
               +++E+G
Sbjct: 746 VFFHQMVERG 755



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 125/543 (23%), Positives = 243/543 (44%), Gaps = 20/543 (3%)

Query: 16  ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR----VG 70
            L+P  + +N++ + L  A + E AL+F   +E     NH  E  +    IL      +G
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDME-----NHGVEPDIVTYNILANGFRILG 354

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            ++ A  ++  M   G+  D   + +LI  + + G ++ES K+ + M   G++ S+ +Y 
Sbjct: 355 LISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYT 414

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L   + + GR   A    ++M   G++P   TY+V++ G      +E AI  +E+M S+
Sbjct: 415 VLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSK 474

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
            I  +    + +I+G      + EA+  F  + + ++   +I Y  MI GY  +    +A
Sbjct: 475 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 534

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           +R + ++    + P  VT+ +L+ G C  GK+ E  K+L  +    + P  +  +  L+ 
Sbjct: 535 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT-SVTYTTLMN 593

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             C+ G +++  D+L  M   +I      Y ++++  CK      +++LL  +  +   L
Sbjct: 594 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARG--L 651

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
            P         +YN +IQ  C      KA     Q+++  +   PV +N LI G    GN
Sbjct: 652 FPDQI------TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGN 705

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
              A  ++  +  + +     AY  +I+++  KG+  +A      M+E G   +   + +
Sbjct: 706 LKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSA 765

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           V+  L +   +  A      M+  G+  + D+   +L A    G          +M++ G
Sbjct: 766 VINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCG 825

Query: 550 SVP 552
            +P
Sbjct: 826 LLP 828



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 141/658 (21%), Positives = 277/658 (42%), Gaps = 92/658 (13%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ------ 88
           NS+ AL  F  +     F H R +   +  ++ R G+    R +L  M ++         
Sbjct: 94  NSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSL 153

Query: 89  ----------WDED--MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA-LFKL 135
                     WD +  ++++L  +Y +  +V +++ +   MK L ++ S+ +Y++ L+ L
Sbjct: 154 CELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL 213

Query: 136 -------------------------------ILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
                                          + R+ R   A  +  +   E   P+  ++
Sbjct: 214 RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSF 273

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N ++ GF     ++ A  FF  M   G+  DV +YN +++G      M+EA +   +M+ 
Sbjct: 274 NALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMEN 333

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
             +EP +++Y  +  G+  +     A ++   M    + P+ VTYT L+ G C  G + E
Sbjct: 334 HGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEE 393

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             K+  +M+ + +     + +  LL   CKSG ++ A  +L  M  + +  +   Y +LI
Sbjct: 394 SFKLKEKMLSQGLKLSIVT-YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLI 452

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
              CK    + AI+L +++  K I   P S +       + +I  L   G   +A+++F 
Sbjct: 453 HGLCKRGAVEEAIELYEEMCSKRI--YPNSFV------CSAIISGLFEKGAISEAQMYFD 504

Query: 405 QLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            + K  V + +  +N +I G++K GN   A    K +  +G+      +  LI  + +KG
Sbjct: 505 SVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKG 564

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           + A+A   LD++   G  P S  + ++M    E+G + +   ++  M  K +K       
Sbjct: 565 KLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKP-----T 619

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
           +I   ++++G                           L ++G+   +V+LL +   R   
Sbjct: 620 QITYTVVVKG---------------------------LCKEGRLHESVQLLKYMYARGLF 652

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
            D  +Y  V+ +   A     A+ +  ++++        + + LI GL   GN K AD
Sbjct: 653 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDAD 710



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/515 (21%), Positives = 239/515 (46%), Gaps = 15/515 (2%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           ++G ++ A+     M K G+  D   + +L+      G ++E+++  + M+  GVE  + 
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L       G    A +   +ML  G+ P   TY +++ G      +E + +  E M
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            S+G+ L +VTY  +++   +  ++DEA  L  EM+   ++P +++Y+ +I G       
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAV 461

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           ++A+ +++EM S  + PN+   +A++ GL + G + E Q     + +  +  ++  ++  
Sbjct: 462 EEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDV-AEEIILYNI 520

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++    K G++  A    K +I   I      +  LI  FCK      A+KLLD +    
Sbjct: 521 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG 580

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
           ++  P S       +Y  ++   C  G          ++  K +    + +  +++G  K
Sbjct: 581 LV--PTSV------TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCK 632

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           EG    + +++K M  RG+  D   Y  +I+S+ +  +   A    + M++    P+   
Sbjct: 633 EGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVT 692

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           +  ++  L   G ++ A R++ ++ ++ ++        I++A   +G V+ AL     M+
Sbjct: 693 YNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMV 752

Query: 547 QSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCL 578
           + G   S+ ++ ++++ L ++   I   K   FC+
Sbjct: 753 ERGFEVSIRDYSAVINRLCKR-NLITDAKFF-FCM 785


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 235/507 (46%), Gaps = 15/507 (2%)

Query: 64  EILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +ILG + K+ H   ++     M  KG+  D     +LI  +   G +  S  +   + +L
Sbjct: 15  KILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKL 74

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G + +    + L K +  +G    +  + +K++++G +  + +Y ++L G     +   A
Sbjct: 75  GYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCA 134

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           I+    ++ R    DVV Y+T+I+G  + K +DEA  L++EM  + I P VI+YTT+I G
Sbjct: 135 IKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICG 194

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +    +  +A  + +EM   ++ PN  TY  L+  LC  GK+ E + +L  M ++ + P 
Sbjct: 195 FCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKP- 253

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D  ++  L+   C  G +  A  +   M++  +  +   Y I+I   CK +  D A+ LL
Sbjct: 254 DVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNN 419
            +++ K +I  P +       +Y+ +I  LC  G+        +++  +G   + V +N+
Sbjct: 314 REMLHKNMI--PDTV------TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+ G  K  N D A  +   M  RG+  +   Y  LI+   + G     +     ++  G
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           +      +  ++  L ++G    A  +   M + G   N      I+ +LL +   ++A 
Sbjct: 426 YCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAE 485

Query: 540 GRIDLMMQSGSVP--NFDSLLSVLSEK 564
             +  M+  G +P  NF S  S ++ K
Sbjct: 486 KLLHEMIAKGLLPFRNFHSERSSVTNK 512



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 209/505 (41%), Gaps = 46/505 (9%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           +R + P  +   +   L   K+    +   + +E  G+   D  T   +I     +G++ 
Sbjct: 4   LRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVP-DLVTLSILINCFCHLGQMA 62

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            +  +L  + K G Q +  +   L++    KG V++S+   D +   G +    SY  L 
Sbjct: 63  FSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILL 122

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G    A +    +      P    Y+ ++ G      ++ A   + +M +RGI 
Sbjct: 123 NGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIF 182

Query: 194 LDVVTYNTMING----------------------------YNRF-------KKMDEAEKL 218
            DV+TY T+I G                            YN          K+ E++ L
Sbjct: 183 PDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNL 242

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
            A M +K ++P V+ Y+ ++ GY  V     A +IF  M    V P+  +Y  ++ GLC 
Sbjct: 243 LAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCK 302

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
             ++ E   +LREM+ + + P D   +  L+   CK G +    D+ K M     P    
Sbjct: 303 GKRVDEAMNLLREMLHKNMIP-DTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLV 361

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  L++  CK +  D+AI L  K+ E+ I  +P         +Y  +I  LC  G+  K
Sbjct: 362 TYNSLLDGLCKNQNLDKAIALFMKMKERGI--QPNK------YTYTALIDGLCKGGRLKK 413

Query: 399 AEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
            +  F+ L+ KG  +D   +  +I G  KEG  D A  +   M   G   +A  +  +I 
Sbjct: 414 GQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIR 473

Query: 458 SYLRKGEPADAKTALDSMIEDGHSP 482
           S L K E   A+  L  MI  G  P
Sbjct: 474 SLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/463 (22%), Positives = 196/463 (42%), Gaps = 42/463 (9%)

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           T I   + M+++GI  D+VT + +IN +    +M  +  +  ++ +   +P  I   T++
Sbjct: 28  TVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLM 87

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           KG         +L   D++ +   + + V+Y  LL GLC  G+     K+LR + +R   
Sbjct: 88  KGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTR 147

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D  ++  ++   CK   ++ A D+   M    I  +   Y  LI  FC A     A  
Sbjct: 148 P-DVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFG 206

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
           LL++++ K I        +    +YN +I  LC  G+  +++     + KKGV  D V +
Sbjct: 207 LLNEMILKNI--------NPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIY 258

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           + L+ G+   G    A +I  +M + GV  D  +Y  +I    +     +A   L  M+ 
Sbjct: 259 SILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLH 318

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
               P +  + S+++ L + GR+ T   + K M  +G   NL     +L+ L    ++++
Sbjct: 319 KNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDK 378

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
           A+     M + G  PN                                  +Y  ++D L 
Sbjct: 379 AIALFMKMKERGIQPN--------------------------------KYTYTALIDGLC 406

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             G+     ++   ++ KG   D  +   +I+GL +EG   +A
Sbjct: 407 KGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEA 449



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/419 (21%), Positives = 180/419 (42%), Gaps = 13/419 (3%)

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P +I +  ++   V ++     + +  +M++  + P+ VT + L+   C  G+M     V
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L ++++    P +  +   L+   C  G +  +      ++      +   YGIL+   C
Sbjct: 68  LGKILKLGYQP-NTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      AIKLL  + ++    RP   +      Y+ +I  LC +    +A   + ++  
Sbjct: 127 KIGETRCAIKLLRTIEDRST--RPDVVM------YSTIIDGLCKDKLVDEAYDLYSEMNA 178

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +G+  D + +  LI G    G    AF ++  M  + +  +   Y  LI++  ++G+  +
Sbjct: 179 RGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKE 238

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           +K  L  M + G  P   ++  +M+     G VQ A ++   MV+ GV  ++     I+ 
Sbjct: 239 SKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIIN 298

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
            L     V+EA+  +  M+    +P+   + SL+  L + G+    + L      R    
Sbjct: 299 GLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPA 358

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           +L +Y  +LD L        A ++  K+ E+G   +  +   LI GL + G  K+   L
Sbjct: 359 NLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQAL 417


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 203/403 (50%), Gaps = 12/403 (2%)

Query: 87  VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
           V  D   F ++I+   + G +++S  +   +++ G   +V  Y  L     +RG    AK
Sbjct: 159 VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAK 218

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
             F +M   G+     TY V++ G F +   +     +E M+  G+  ++ TYN ++N +
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQH 278

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +  +  +A KLF EM+E+ +   +++Y T+I G     +A++A ++ D+MKS  + PN 
Sbjct: 279 CKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNL 338

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           +TY  L+ G C  GK+ +   + R++  R + P   +  + + G  CK G  + A  V+K
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF-CKKGDTSGAGKVVK 397

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M    I      Y ILI+ F + +  ++AI+L   +  +E+ L P      +  +Y+ +
Sbjct: 398 EMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPM--EELGLTP------DVHTYSVL 449

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           I   C  GQ  +A   F+ ++ K  L+P  V +N ++ G+ KEG+   A  + + M  + 
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAKK-LEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           +P +  +Y  +IE   ++ +  +A+  ++ MI+ G  P+ S+ 
Sbjct: 509 LPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSIL 551



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 177/399 (44%), Gaps = 30/399 (7%)

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           YFN+M+ +G  P  + +N +L     S       RFF + K + + LDV ++  +I G  
Sbjct: 116 YFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK-VDLDVYSFGIVIKGCC 174

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
              +++++  L  E++E    P V+ YTT+I G       + A  +F EM  F +  N  
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEW 234

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL------LGVQCKSGHLNAA 321
           TYT L+ GL   G    ++K   EM E+    +++ VF  L      +   CK G    A
Sbjct: 235 TYTVLIHGLFKNG----IKKQGFEMYEKM---QEDGVFPNLYTYNCVMNQHCKDGRTKDA 287

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   M    +      Y  LI   C+    + A K++D++            ++    
Sbjct: 288 FKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM--------KSDGINPNLI 339

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKI 439
           +YN +I   C  G+ GKA    R L  +G L P  V +N L+ G  K+G+   A ++VK 
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRG-LSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  RG+      Y  LI+++ R      A      M E G +P    +  ++      G+
Sbjct: 399 MEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ 458

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           +  ASR+ K MV K ++ N     K++   ++ G+ +E 
Sbjct: 459 MNEASRLFKLMVAKKLEPN-----KVIYNTMVLGYCKEG 492



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 142/282 (50%), Gaps = 1/282 (0%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + +N V N       ++ A + F  +   G+ + +  T+  +I  L R  K N A  ++ 
Sbjct: 269 YTYNCVMNQHCKDGRTKDAFKLFDEMRERGV-SCNIVTYNTLIGGLCREMKANEANKVMD 327

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G+  +   +  LI+ +   G + +++ +   +K  G+  S+ +Y+ L     ++G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A +   +M   GI+P++ TY +++  F     +E AI+    M+  G++ DV TY+
Sbjct: 388 DTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYS 447

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G+    +M+EA +LF  M  K +EP  + Y TM+ GY     +  ALR+F EM+  
Sbjct: 448 VLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEK 507

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
           ++ PN  +Y  ++  LC   K  E + ++ +M++  I P D+
Sbjct: 508 ELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDS 549



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/309 (20%), Positives = 136/309 (44%), Gaps = 11/309 (3%)

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
           T++  Y ++I  + +++  D +I   +++V+K  +  P S      + +N ++  +  + 
Sbjct: 92  TKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFV--PGS------NCFNNLLTFVVGSS 143

Query: 395 QTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
              +   FF +   K  LD  +F  +I+G  + G  + +F+++  +   G   +   Y  
Sbjct: 144 SFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTT 203

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI+   ++GE   AK     M + G       +  ++  LF++G  +    + + M E G
Sbjct: 204 LIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDG 263

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAV 571
           V  NL     ++      G  ++A    D M + G   ++  +++L+  L  + K   A 
Sbjct: 264 VFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           K++D         +L +Y  ++D     GK   A S+   +  +G      + + L++G 
Sbjct: 324 KVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 632 NQEGNTKQA 640
            ++G+T  A
Sbjct: 384 CKKGDTSGA 392


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 139/588 (23%), Positives = 245/588 (41%), Gaps = 79/588 (13%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL FF+ +  + LF H   T   MI  L   G+++  + +L  M  +G    ED+F  +I
Sbjct: 59  ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             Y + G+ + +V++F  +K+ G + SVK Y+ +   +L   R  M    +  M  +G E
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT-------------------- 198
           P   TYNV+L     + K++ A +   +M ++G   D V+                    
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238

Query: 199 ----------YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI---------- 238
                     YN +ING  +      A +L  EM EK I P VISY+T+I          
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298

Query: 239 -------------------------KGYVAVERADDALRIFDEM-KSFDVKPNAVTYTAL 272
                                    KG        DAL ++++M + F ++PN V Y  L
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G +V+   V   M E    P   + +  L+    K G L+ A  +   M+   
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT-YGSLINGFAKRGSLDGAVYIWNKMLTSG 417

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
                  Y  ++E  C+   +  A  L++ ++ KE              ++N  I+ LC 
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIE-IMSKE-------NCAPSVPTFNAFIKGLCD 469

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            G+   AE  FRQ+ ++    P  V +N L+ G +K    + A+ + + +  RGV   + 
Sbjct: 470 AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS 529

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  L+      G P  A   +  M+ DG SP       ++ +  + G+ + A++++  +
Sbjct: 530 TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589

Query: 511 VEKGVKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
                K   D+++   ++  L      E+ +  ++ M+ +G VP+  +
Sbjct: 590 SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIAT 637



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/547 (20%), Positives = 221/547 (40%), Gaps = 111/547 (20%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V + L G    +     +R ++R G F  +  T+  +++ L +  K++ A+ +L++M
Sbjct: 149 YNHVLDTLLGENRIQMIYMVYRDMKRDG-FEPNVFTYNVLLKALCKNNKVDGAKKLLVEM 207

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKI---------------------------FD 115
             KG   D   +  +I S  + G+V+E  ++                           F+
Sbjct: 208 SNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFE 267

Query: 116 IMKQL---GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +M+++   G+  +V SY  L  ++   G+  +A  +  +ML  G  P  +T + ++ G F
Sbjct: 268 LMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF 327

Query: 173 LSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           L      A+  +  M +  G+  +VV YNT++ G+     + +A  +F+ M+E    P +
Sbjct: 328 LRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNI 387

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT--------------------- 270
            +Y ++I G+      D A+ I+++M +    PN V YT                     
Sbjct: 388 RTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI 447

Query: 271 --------------ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
                         A + GLCDAG++   +KV R+M +++  P +   + +LL    K+ 
Sbjct: 448 MSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN 507

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            +  A  + + +    +   +  Y  L+   C A +   A++L+ K++            
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD---------- 557

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEI 436
                               GK+             D +  N +I  + K+G  + A ++
Sbjct: 558 --------------------GKSP------------DEITMNMIILAYCKQGKAERAAQM 585

Query: 437 VKIM--GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           + ++  GRR    D  +Y  +I    R     D    L+ MI  G  P+ + +  ++   
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645

Query: 495 FEDGRVQ 501
             D  V+
Sbjct: 646 ILDDIVR 652



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 121/284 (42%), Gaps = 36/284 (12%)

Query: 402 FFRQLMKKGVL--DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
           FF+ +    +    P+ F  +IR  + +G  DS   +++ M  +G     D +I +I  Y
Sbjct: 62  FFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY 121

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            + G    A      + E G  P+  ++  V+++L  + R+Q    V + M   G + N+
Sbjct: 122 RQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNV 181

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS--------EKGKTIA-- 569
                +L+AL     V+ A   +  M   G  P+  S  +V+S        ++G+ +A  
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER 241

Query: 570 -----------------------AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
                                  A +L+   + +    ++ SY  +++ L  +G+   A+
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRG 649
           S L +++++G   +  +   L+ G    G T  A D+ ++MIRG
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 163/706 (23%), Positives = 303/706 (42%), Gaps = 95/706 (13%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFF----RWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           FDH     V+ G      A Q F      V++   F  D  T   +++   ++G + +A 
Sbjct: 73  FDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCF--DSVTCNILVKGYCQIGLVQYAE 130

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            I+ ++   GV  D      L++ Y + G+V  ++ + +   + GV+  + +Y+ L    
Sbjct: 131 WIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAF 190

Query: 137 LRRGRYMMAKRYFNKMLS---------------------EGIEPTRHTYNVMLWGFFLSL 175
            +RG    A+   N++L                        ++PT  T+  ++  +    
Sbjct: 191 CKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHR 250

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
            ++     +E M   G+  DVVT ++++ G  R  K+ EA  L  EM    ++P  +SYT
Sbjct: 251 GIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYT 310

Query: 236 TMIK-----------------------------------GYVAVERADDALRIFDEMKSF 260
           T+I                                    G     ++ +A  +F  +   
Sbjct: 311 TIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKL 370

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           ++ PN VTYTALL G C  G +   + VL++M + ++ P +   F  ++    K G LN 
Sbjct: 371 NLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLP-NVVTFSSIINGYAKKGMLNK 429

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK-----LVEKEIILRPQST 375
           A +VL+ M++++I      Y IL++ + +   ++ A     +     L E  II      
Sbjct: 430 AVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNII------ 483

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
                  ++ ++ +L  +G   +A+   + ++ KG+ LD   +++L+ G+ KEGN  +A 
Sbjct: 484 -------FDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAAL 536

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +V+ M  + +  D  AY  L +  LR G+  + K+    MIE G +P    + SVM + 
Sbjct: 537 SVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEPKSVFSRMIELGLTPDCVTYNSVMNTY 595

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
           F  G+ + A  ++  M   GV  N+     ++  L   G +E+ +  +  M+  G VP  
Sbjct: 596 FIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTP 655

Query: 554 --FDSLLSVLSEKGKTIAAV----KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
                LL   S   K  A +    KL+D  L  + ++    Y  ++  L   G T  A  
Sbjct: 656 IIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMV----YNTLITVLCRLGMTKKANV 711

Query: 608 ILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMS 652
           +L +++ KG   D  + + LI G     + ++A +  S+M+   +S
Sbjct: 712 VLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGIS 757



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 145/603 (24%), Positives = 266/603 (44%), Gaps = 66/603 (10%)

Query: 30  LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
           L  A  S+ A + F+ + +  L   +  T+  +++   +VG +  A  +L  M K+ V  
Sbjct: 351 LFKAGKSKEAEEMFQTILKLNLV-PNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLP 409

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           +   F  +I  Y KKG++ ++V++   M Q+ +  +V  Y  L     R G++  A  ++
Sbjct: 410 NVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFY 469

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
            +M S G+E     ++++L     S  ++ A    +D+ S+GI LDV  Y+++++GY  F
Sbjct: 470 KEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGY--F 527

Query: 210 KKMDEAEKL------------------------------------FAEMKEKNIEPTVIS 233
           K+ +E+  L                                    F+ M E  + P  ++
Sbjct: 528 KEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVT 587

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y +++  Y    + ++AL + +EMKS+ V PN VTY  L+ GLC  G + +V  VL EM+
Sbjct: 588 YNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEML 647

Query: 294 E-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
              Y+P      F  LL    +S   +A   + K ++ + +      Y  LI   C+  M
Sbjct: 648 AVGYVPTPIIHKF--LLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGM 705

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
             +A  +L ++V K I          +  +YN +I+  C      KA   + Q++  G+ 
Sbjct: 706 TKKANVVLTEMVIKGI--------SADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGIS 757

Query: 413 DPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
             +  +N L+ G S  G    A ++V  M  RG+  +A  Y  L+  + R G   D+   
Sbjct: 758 PNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKL 817

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI------ 525
              MI  G  P +  +  +++   + G+++ A  ++  M+ +G   N      +      
Sbjct: 818 YCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCK 877

Query: 526 ------LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV---LSEKGKTIAAVKLLDF 576
                 ++ LL   +  EA   +  M + G VP+  +L+ +    S  GK   A +LL  
Sbjct: 878 LSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKT 937

Query: 577 CLG 579
            +G
Sbjct: 938 VIG 940



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 127/585 (21%), Positives = 241/585 (41%), Gaps = 46/585 (7%)

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
           W++ ++E     +   G V +   ++  M   GV  +V S + L   + + G   +A  Y
Sbjct: 13  WNDLLYE-----FNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGY 67

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
               + + +     TYN ++WGF      +       +M  +G+  D VT N ++ GY +
Sbjct: 68  LRNSVFDHV-----TYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQ 122

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
              +  AE +   +    +    I   T++ GY  V     AL + ++     VKP+ VT
Sbjct: 123 IGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVT 182

Query: 269 YTALLPGLCDAGKMVEVQKVLREM----------------VERYIPPKDNS----VFMKL 308
           Y  L+   C  G + + + V+ E+                VE +   +D       +  L
Sbjct: 183 YNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTL 242

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   CK   ++    + + MI   +  +      ++   C+            KL E  +
Sbjct: 243 IAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRH----------GKLTEAAM 292

Query: 369 ILRPQSTLDMEAS--SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHS 425
           +LR    + ++ +  SY  +I  L  +G+  +A     Q++ +G+ +D V    ++ G  
Sbjct: 293 LLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLF 352

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K G    A E+ + + +  +  +   Y  L++ + + G+   A+T L  M ++   P   
Sbjct: 353 KAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVV 412

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            F S++    + G +  A  V++ MV+  +  N+ + A +L+     G  E A G    M
Sbjct: 413 TFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEM 472

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
              G   N   FD LL+ L   G    A  L+   L +   +D+ +Y  ++D     G  
Sbjct: 473 KSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNE 532

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
             A S++ ++ EK    D  + + L  GL + G  +   + SRMI
Sbjct: 533 SAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMI 577



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 133/595 (22%), Positives = 252/595 (42%), Gaps = 31/595 (5%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L R GKL  A  +L +M   G+  +   +  +I +  K G V E+      M   G+   
Sbjct: 281 LCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISID 340

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           +     +   + + G+   A+  F  +L   + P   TY  +L G      +E A    +
Sbjct: 341 LVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQ 400

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M+   +  +VVT++++INGY +   +++A ++  +M + NI P V  Y  ++ GY    
Sbjct: 401 KMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTG 460

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           + + A   + EMKS+ ++ N + +  LL  L  +G M E Q ++++++ + I   D   +
Sbjct: 461 QHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGI-YLDVFNY 519

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD------RAIKL 359
             L+    K G+ +AA  V++ M    +  +   Y  L +   +   Y+      R I+L
Sbjct: 520 SSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIEL 579

Query: 360 --------LDKLVEKEIIL-RPQSTLDM-----------EASSYNPMIQHLCHNGQTGKA 399
                    + ++    I  + ++ LD+              +YN +I  LC  G   K 
Sbjct: 580 GLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKV 639

Query: 400 EIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                +++  G V  P+    L++ +S+    D+  +I K +   G+  +   Y  LI  
Sbjct: 640 ISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITV 699

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             R G    A   L  M+  G S     + +++        V+ A      M+  G+  N
Sbjct: 700 LCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPN 759

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           +     +LE L   G + +A   +  M + G VPN   ++ L+S     G    ++KL  
Sbjct: 760 ITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYC 819

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             + +  I    +Y  ++     AGK   A  +L +++ +G + +  + D LI G
Sbjct: 820 EMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICG 874



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 138/292 (47%), Gaps = 2/292 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V N       +E+AL     ++  G+   +  T+  +I  L + G +     +L +M
Sbjct: 588 YNSVMNTYFIQGKTENALDLLNEMKSYGVM-PNMVTYNILIGGLCKTGAIEKVISVLHEM 646

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G      + + L+++Y +       ++I   +  +G+  +   Y+ L  ++ R G  
Sbjct: 647 LAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMT 706

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A     +M+ +GI     TYN ++ G+     +E A   +  M   GIS ++ TYN +
Sbjct: 707 KKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNAL 766

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           + G +    M +A+KL +EM+E+ + P   +Y  ++ G+  V    D+++++ EM +   
Sbjct: 767 LEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGF 826

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            P   TY  L+     AGKM + +++L EM+ R   P ++S +  L+   CK
Sbjct: 827 IPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIP-NSSTYDVLICGWCK 877



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 90/416 (21%), Positives = 179/416 (43%), Gaps = 40/416 (9%)

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M++  + P+   +  LL     +G + +V+ +  EMV   + P   SV + L+   CK G
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNL-LVHSLCKVG 59

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L  A   L+  +   +      Y  ++  FCK  + D+   LL ++V+K +        
Sbjct: 60  DLGLALGYLRNSVFDHVT-----YNTVVWGFCKRGLADQGFGLLSEMVKKGVCF------ 108

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
             ++ + N +++  C  G    AE     L+  GV LD +  N L+ G+ + G    A +
Sbjct: 109 --DSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALD 166

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI------EDG---------- 479
           +V+   + GV  D   Y  L+ ++ ++G+ A A++ ++ ++      E G          
Sbjct: 167 LVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETW 226

Query: 480 -----HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
                  P    + +++ +  +   +     + + M+  GV  ++   + IL  L   G 
Sbjct: 227 DGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGK 286

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           + EA   +  M   G  PN   + +++S L + G+ + A       + R   IDL     
Sbjct: 287 LTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTT 346

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRM 646
           ++D L  AGK+  A  +   I++   V +  +   L+ G  + G+ + A+ +L +M
Sbjct: 347 MMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKM 402


>gi|383143992|gb|AFG53485.1| Pinus taeda anonymous locus 0_3261_01 genomic sequence
          Length = 153

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/153 (52%), Positives = 106/153 (69%)

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D++ Y  LIES+LRKG PA+AK   D M+E GH P +S FRSV++ L+ DGR QTASRVM
Sbjct: 1   DSETYNVLIESFLRKGLPAEAKYTSDKMMEIGHLPTASTFRSVIDGLYSDGRFQTASRVM 60

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKT 567
           K M+EK +KEN DL+  ILE LL RGHVEE + R++LM   G  P+ + L + L EKGK+
Sbjct: 61  KCMLEKDIKENFDLIPNILETLLDRGHVEEVIDRLELMFVKGCAPDLNKLSNGLCEKGKS 120

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
             A +LL F L ++C I  A+Y+ VL+ L A G
Sbjct: 121 FTACQLLQFALQKNCNIKAATYDTVLNGLCADG 153



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 3/154 (1%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D + + VLIES+ +KG+  E+    D M ++G   +  ++ ++   +   GR+  A R  
Sbjct: 1   DSETYNVLIESFLRKGLPAEAKYTSDKMMEIGHLPTASTFRSVIDGLYSDGRFQTASRVM 60

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
             ML + I+        +L        +E  I   E M  +G + D+   N + NG    
Sbjct: 61  KCMLEKDIKENFDLIPNILETLLDRGHVEEVIDRLELMFVKGCAPDL---NKLSNGLCEK 117

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
            K   A +L     +KN      +Y T++ G  A
Sbjct: 118 GKSFTACQLLQFALQKNCNIKAATYDTVLNGLCA 151



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 4/154 (2%)

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D  TYN +I  + R     EA+    +M E    PT  ++ ++I G  +  R   A R+ 
Sbjct: 1   DSETYNVLIESFLRKGLPAEAKYTSDKMMEIGHLPTASTFRSVIDGLYSDGRFQTASRVM 60

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
             M   D+K N      +L  L D G + EV   L  M  +   P  N    KL    C+
Sbjct: 61  KCMLEKDIKENFDLIPNILETLLDRGHVEEVIDRLELMFVKGCAPDLN----KLSNGLCE 116

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
            G    A  +L+  ++ +   +A  Y  ++   C
Sbjct: 117 KGKSFTACQLLQFALQKNCNIKAATYDTVLNGLC 150


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 254/563 (45%), Gaps = 34/563 (6%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           ++ + W+  L+   R   P    + ++N      +SE  L+FF+W ++    ++  ET  
Sbjct: 27  LSNQHWS-ELKPHFRTTKPAIFLDQLFN---AGVDSELVLRFFQWSQKEFRISYGLETTG 82

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF-----------------EVLIESYGK 103
           K++ +L    K +  R  L  + K        +F                 ++L+ +Y  
Sbjct: 83  KVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVT 142

Query: 104 KGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT 163
              +  + ++F  ++  G + S+ S + L   +++       +  + +M+   I+P   T
Sbjct: 143 NLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTT 202

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR---FKKMDEAEKLFA 220
           +N+ + G   + KL  A    ED+K+ G S ++VTYNT+I+G+ +     KM  A+ +  
Sbjct: 203 FNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILK 262

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           EM    I P  I++ T+I G+   E    A   F+EM+   +KPN VTY +L+ GL + G
Sbjct: 263 EMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNG 322

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           K+ E   +  +MV   + P +   F  L+   CK   +  A  +   +    +   A  +
Sbjct: 323 KLDEAIALWDKMVGLGLKP-NIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITF 381

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             +I+ FCKA M +    L + ++++ I   P        S+YN +I  LC N     A+
Sbjct: 382 NTMIDAFCKAGMMEEGFALHNSMLDEGIF--PN------VSTYNCLIAGLCRNQNVRAAK 433

Query: 401 IFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
               ++    +  D V +N LI G  K+G P  A +++  M   GV  +   Y  L++ Y
Sbjct: 434 KLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGY 493

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
             +G    A      M ++G       +  +++   + G+++ A+R++  M+EKG+  N 
Sbjct: 494 CMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNR 553

Query: 520 DLVAKILEALLMRGHVEEALGRI 542
                +   +L +G + +  G +
Sbjct: 554 TTYDVVRLEMLEKGFIPDIEGHL 576



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 169/333 (50%), Gaps = 9/333 (2%)

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
           G  GK+  A  IL +M    +  +E  F  LI+ + K   V  +   F+ M++ G++ ++
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
            +Y++L   +   G+   A   ++KM+  G++P   T+N ++ GF     ++ A + F+D
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDD 368

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           +  + +  + +T+NTMI+ + +   M+E   L   M ++ I P V +Y  +I G    + 
Sbjct: 369 IAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQN 428

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
              A ++ +EM+++++K + VTY  L+ G C  G+  + +K+L EM+   + P ++  + 
Sbjct: 429 VRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKP-NHVTYN 487

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+   C  G+L AA  V   M +         Y +LI+ FCK    + A +LL++++EK
Sbjct: 488 TLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEK 547

Query: 367 EIILRPQST------LDMEASSYNPMIQHLCHN 393
              L P  T      L+M    + P I+   +N
Sbjct: 548 G--LNPNRTTYDVVRLEMLEKGFIPDIEGHLYN 578



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/521 (21%), Positives = 227/521 (43%), Gaps = 62/521 (11%)

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
           QW +  F +   SYG    ++ + K+  ++        V+S+  L KL+  +        
Sbjct: 66  QWSQKEFRI---SYG----LETTGKVLHLLANSKKYSKVRSF--LDKLV--KNEKHTVSS 114

Query: 148 YFNKMLSEGIEPTRHTY--NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            F+ +L  G  P  +    ++++  +  +L++ +A   F  ++  G  L + + N +++ 
Sbjct: 115 VFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSA 174

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +  +  E + ++ EM ++ I+P + ++   I G     + + A  + +++K++   PN
Sbjct: 175 LVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPN 234

Query: 266 AVTYTALLPGLC---DAGKMVEVQKVLREMVERYIPP-------------KDNSV----- 304
            VTY  L+ G C    AGKM     +L+EM+   I P             KD +V     
Sbjct: 235 IVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKN 294

Query: 305 ----------------FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                           +  L+     +G L+ A  +   M+ L +      +  LI  FC
Sbjct: 295 AFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFC 354

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K +M   A KL D + E++++  P       A ++N MI   C  G   +       ++ 
Sbjct: 355 KKKMIKEARKLFDDIAEQDLV--PN------AITFNTMIDAFCKAGMMEEGFALHNSMLD 406

Query: 409 KGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +G+   V+ +N LI G  +  N  +A +++  M    +  D   Y  LI  + + GEP+ 
Sbjct: 407 EGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSK 466

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+  L  M+  G  P    + ++M+    +G ++ A +V   M ++G + N+     +++
Sbjct: 467 AEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIK 526

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
                G +E+A   ++ M++ G  PN   +D +   + EKG
Sbjct: 527 GFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 127/270 (47%), Gaps = 7/270 (2%)

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
           +  +S NP++  L    +TG+ +  +++++K+ +  +   FN  I G  K G  + A ++
Sbjct: 163 LSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDV 222

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPAD---AKTALDSMIEDGHSPASSLFRSVMES 493
           ++ +   G   +   Y  LI+ + +KG       A   L  M+ +   P    F ++++ 
Sbjct: 223 IEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDG 282

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             +D  V  A    + M  +G+K N+     ++  L   G ++EA+   D M+  G  PN
Sbjct: 283 FCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPN 342

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              F++L++   +K     A KL D    +D + +  ++  ++DA   AG     +++  
Sbjct: 343 IVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHN 402

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            ++++G   +  + + LIAGL +  N + A
Sbjct: 403 SMLDEGIFPNVSTYNCLIAGLCRNQNVRAA 432


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 217/500 (43%), Gaps = 47/500 (9%)

Query: 56  RETHL-KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           +E HL K++    R GK N +   L  M  KG   D  +   LI+ +     + ++ ++ 
Sbjct: 68  KEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM 127

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           +I+++ G                                    +P    YN ++ GF  +
Sbjct: 128 EILERYG------------------------------------KPDVFAYNALISGFIKA 151

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +LE A R  + MKSRG   DVVTYN MI  +    K+D A ++F E+ + N EPTVI+Y
Sbjct: 152 NQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITY 211

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           T +I+  +     D A+++ DEM S  ++P+ +TY A++ G+C    + +  ++LR +  
Sbjct: 212 TILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSS 271

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R   P D   +  LL      G  +    ++  MI +        + ILI   C+    +
Sbjct: 272 RGCKP-DIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVE 330

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A+ LL  + EK   L+P      +A  Y+P+I   C  G+   A  F   ++  G L D
Sbjct: 331 EAVNLLRSMKEKG--LKP------DAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPD 382

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +N ++ G  + G  D A E+ + +   G P +  +Y  L  +    G+   A   + 
Sbjct: 383 IVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMIL 442

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            ++  G  P    + S++  L  DG V  A  ++  M     + N+     IL  L    
Sbjct: 443 KLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVN 502

Query: 534 HVEEALGRIDLMMQSGSVPN 553
              +A+  +  M + G  PN
Sbjct: 503 RANDAIEVLAAMTEKGCQPN 522



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 199/418 (47%), Gaps = 10/418 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI  + K   ++ + ++ D MK  G    V +Y+ +      RG+  +A   F ++L
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +  EPT  TY +++    L   ++ A++  ++M S+G+  D +TYN +I G  +   +D
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A +L   +  +  +P +I+Y  +++  ++  +  +  ++  EM S   KPN VT++ L+
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC  GK+ E   +LR M E+ + P D   +  L+   C+ G L+ A + L+ MI    
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKP-DAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +  +Y  ++   C+    D+A+++ +KL   E+   P        SSYN +   L  +
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKL--DEVGCPPN------VSSYNTLFSALWSS 431

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G   +A     +L+ +G+  D + +N+LI    ++G  D A E++  M       +  +Y
Sbjct: 432 GDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSY 491

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
             ++    +     DA   L +M E G  P  + +  ++E +   G    A  +  S+
Sbjct: 492 NIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 205/445 (46%), Gaps = 14/445 (3%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           ++N   A +    +ER G    D   +  +I    +  +L +A  +L  M  +G   D  
Sbjct: 117 SRNIGKATRVMEILERYG--KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVV 174

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            + ++I S+  +G +  +++IF+ + +   E +V +Y  L +  +  G   +A +  ++M
Sbjct: 175 TYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEM 234

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           LS+G+EP   TYN ++ G    + ++ A      + SRG   D++TYN ++       K 
Sbjct: 235 LSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKW 294

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            E EKL +EM     +P V++++ +I       + ++A+ +   MK   +KP+A  Y  L
Sbjct: 295 SEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPL 354

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G++    + L  M+     P D   +  ++   C++G  + A +V + +  + 
Sbjct: 355 IAGFCREGRLDLATEFLEYMISDGCLP-DIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
            P     Y  L      +    RA++++ KL+ + I        D +  +YN +I  LC 
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGI--------DPDEITYNSLISCLCR 465

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           +G   +A I     M+ G   P  V++N ++ G  K    + A E++  M  +G   +  
Sbjct: 466 DGMVDEA-IELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNET 524

Query: 451 AYICLIESYLRKGEPADAKTALDSM 475
            YI LIE     G  A+A    +S+
Sbjct: 525 TYILLIEGIGFSGLRAEAMELANSL 549



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 222/517 (42%), Gaps = 51/517 (9%)

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G+Y  +  +   M+ +G  P       ++ GFF S  +  A R  E ++  G   DV 
Sbjct: 81  RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVF 139

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            YN +I+G+ +  +++ A ++   MK +   P V++Y  MI  + +  + D AL IF+E+
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL 199

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
              + +P  +TYT L+      G +    K+L EM+ + + P                  
Sbjct: 200 LKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEP------------------ 241

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                D L              Y  +I   CK  M D+A +LL  L  +    +P     
Sbjct: 242 -----DTLT-------------YNAIIRGMCKEMMVDKAFELLRSLSSRGC--KP----- 276

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGH-SKEGNPDSAFEI 436
            +  +YN +++ L   G+  + E    +++  G    V  ++++ G   ++G  + A  +
Sbjct: 277 -DIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNL 335

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M  +G+  DA  Y  LI  + R+G    A   L+ MI DG  P    + ++M  L  
Sbjct: 336 LRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCR 395

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G+   A  V + + E G   N+     +  AL   G    AL  I  ++  G  P+   
Sbjct: 396 TGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEIT 455

Query: 554 FDSLLSVLSEKGKTIAAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
           ++SL+S L   G    A++LL D   GR    ++ SY  +L  L    +  +A  +L  +
Sbjct: 456 YNSLISCLCRDGMVDEAIELLVDMQSGRY-RPNVVSYNIILLGLCKVNRANDAIEVLAAM 514

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
            EKG   +  +   LI G+   G   +A  L+  + G
Sbjct: 515 TEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHG 551



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 168/358 (46%), Gaps = 9/358 (2%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNS----EHALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           K R  +P     + YN++ G+  S    + AL+ F  + +         T+  +IE    
Sbjct: 165 KSRGFLPDV---VTYNIMIGSFCSRGKLDLALEIFEELLKDNC-EPTVITYTILIEATIL 220

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
            G ++ A  +L +M  KG++ D   +  +I    K+ +V ++ ++   +   G +  + +
Sbjct: 221 DGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIIT 280

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y+ L + +L RG++   ++  ++M+S G +P   T+++++       K+E A+     MK
Sbjct: 281 YNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMK 340

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +G+  D   Y+ +I G+ R  ++D A +    M      P +++Y T++ G     +AD
Sbjct: 341 EKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKAD 400

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            AL +F+++      PN  +Y  L   L  +G      +++ +++ + I P D   +  L
Sbjct: 401 QALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDP-DEITYNSL 459

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
           +   C+ G ++ A ++L  M           Y I++   CK    + AI++L  + EK
Sbjct: 460 ISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEK 517



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 191/468 (40%), Gaps = 95/468 (20%)

Query: 259 SFDVKP--------NAVTYTALLPGLCDAGKMVEVQKV--LREMVERYIPPKD--NSVFM 306
           SF  +P        ++   + + P L DA K+   QKV    E  + ++   D      M
Sbjct: 14  SFTTQPLKPTSNSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTHVLSFDFKEVHLM 73

Query: 307 KLLGVQCKSGHLNAAADVLKAMI-----------------------------------RL 331
           KLL   C++G  N +   L+ M+                                   R 
Sbjct: 74  KLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERY 133

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
             P +   Y  LI  F KA   + A ++LD++  +  +         +  +YN MI   C
Sbjct: 134 GKP-DVFAYNALISGFIKANQLENANRVLDRMKSRGFL--------PDVVTYNIMIGSFC 184

Query: 392 HNGQTGKAEIFFRQLMK-----------------------------------KGV-LDPV 415
             G+   A   F +L+K                                   KG+  D +
Sbjct: 185 SRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTL 244

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N +IRG  KE   D AFE+++ +  RG   D   Y  L+ + L +G+ ++ +  +  M
Sbjct: 245 TYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM 304

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           I  G  P       ++ +L  DG+V+ A  +++SM EKG+K +      ++      G +
Sbjct: 305 ISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRL 364

Query: 536 EEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           + A   ++ M+  G +P   N++++++ L   GK   A+++ +      C  +++SY  +
Sbjct: 365 DLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTL 424

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             AL ++G    A  ++ K++ +G   D  + + LI+ L ++G   +A
Sbjct: 425 FSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEA 472


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 222/484 (45%), Gaps = 53/484 (10%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKK--GVQWDEDMFEVLIESYGKKGIVQESVKIFD 115
           T+  +++   + G+++ A  +L DM  +  G   ++  + V+I    +KG ++++ ++ D
Sbjct: 231 TYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD 290

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           IM+ L  + S  +Y+ L   +L R     A     +M +EGI PT  TYN ++ G F + 
Sbjct: 291 IMR-LSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTG 349

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
             E A   F++M+++G+  D++TYN++INGY +   + +A  LF ++K   + PTV++Y 
Sbjct: 350 NAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYN 409

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I GY  +   + A R+ +EM   D  P+  TYT L+ G C    +  V+    EM+ +
Sbjct: 410 ILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSK 469

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            + P                       D      R+S                 AE+   
Sbjct: 470 GLEP-----------------------DCFAYNTRIS-----------------AELTIG 489

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           AI    +L E E++LR  S+   +  +YN +I  LC  G    A + + +++  G+ LD 
Sbjct: 490 AITNAFQLRE-EMMLRGISS---DTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDC 545

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +  LI  H + G    A  I   M   G+      Y   I +Y R+G    A      
Sbjct: 546 VTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRK 605

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+E+G  P    +  +M +L   GR ++A +    M+E+G+  N     K    LL+ G 
Sbjct: 606 MLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPN-----KYTYTLLIDGS 660

Query: 535 VEEA 538
            +E 
Sbjct: 661 CKEG 664



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 233/535 (43%), Gaps = 45/535 (8%)

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           + +  F  M + GV   VK  + + +++    R+   +  ++ ML  G+EP+  TYN +L
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 169 WGFFLSLKLETAIRFFEDMKSR--GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
             F  + +++ A+   +DM++R  G   + VTYN +ING  R  ++++A +L   M+   
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK 296

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            + +  +Y  +I G +A +  + A  +  EM++  + P  VTY  L+ GL   G     Q
Sbjct: 297 -KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
               EM  + + P D   +  L+   CK+G+L  A  +   + R  +      Y ILI+ 
Sbjct: 356 VKFDEMRAKGLLP-DLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDG 414

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
           +C+    + A +L +++ E++ +         +  +Y  ++   C         IFF ++
Sbjct: 415 YCRLGDLEGARRLKEEMTEEDCL--------PDVCTYTILMNGSCMVRNLAMVRIFFDEM 466

Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           + KG+  D  A+N  I      G   +AF++ + M  RG+  D   Y  LI+   + G  
Sbjct: 467 LSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSL 526

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            DA      M+ DG       +  ++ +  E GR+  A  +   MV  G+  ++      
Sbjct: 527 KDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIF 586

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           +     RG++  A G    M++ G  PN                                
Sbjct: 587 IHTYCRRGNLYLAYGWFRKMLEEGVEPN-------------------------------- 614

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             +Y  ++ AL   G+T +AY    +++E+G V +  +   LI G  +EGN   A
Sbjct: 615 EVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHA 669



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 178/403 (44%), Gaps = 11/403 (2%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +LL+M  +G+      +  LI+   K G  + +   FD M+  G+   + +Y++L  
Sbjct: 319 AGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLIN 378

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
              + G    A   F  +   G+ PT  TYN+++ G+     LE A R  E+M       
Sbjct: 379 GYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLP 438

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           DV TY  ++NG    + +      F EM  K +EP   +Y T I   + +    +A ++ 
Sbjct: 439 DVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLR 498

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           +EM    +  + VTY  L+ GLC  G + +   +  +MV   +   D   +  L+   C+
Sbjct: 499 EEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLR-LDCVTYTCLIHAHCE 557

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G L  A ++   M+   +      Y I I  +C+      A     K++E+ +   P  
Sbjct: 558 RGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGV--EPNE 615

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSA 433
                  +YN ++  LC  G+T  A   F +++++G V +   +  LI G  KEGN   A
Sbjct: 616 V------TYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHA 669

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
             +   M ++G+  D   +  L + +  +G   DA   L++++
Sbjct: 670 IRLYCEMHQKGIHPDHCTHNALFKGF-GEGHMYDAVQYLENVV 711



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 166/367 (45%), Gaps = 3/367 (0%)

Query: 3   ERAWTTRLQNKIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E+A    L+ +   +VP    +N + + L    N+E A   F  +   GL   D  T+  
Sbjct: 317 EKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLP-DLITYNS 375

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I    + G L  A C+  D+ + G+      + +LI+ Y + G ++ + ++ + M +  
Sbjct: 376 LINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEED 435

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               V +Y  L           M + +F++MLS+G+EP    YN  +        +  A 
Sbjct: 436 CLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAF 495

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +  E+M  RGIS D VTYN +I+G  +   + +A  L+ +M    +    ++YT +I  +
Sbjct: 496 QLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAH 555

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R  +A  IFD M +  + P+ VTYT  +   C  G +       R+M+E  + P +
Sbjct: 556 CERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNE 615

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + +  L+   C+ G   +A      M+   +      Y +LI+  CK   +  AI+L  
Sbjct: 616 VT-YNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYC 674

Query: 362 KLVEKEI 368
           ++ +K I
Sbjct: 675 EMHQKGI 681



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 95/187 (50%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L + G L  A  + + M   G++ D   +  LI ++ ++G + E+  IF
Sbjct: 509 DTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIF 568

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M   G+  SV +Y        RRG   +A  +F KML EG+EP   TYNV++      
Sbjct: 569 DGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRM 628

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + E+A + F +M  RG+  +  TY  +I+G  +      A +L+ EM +K I P   ++
Sbjct: 629 GRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTH 688

Query: 235 TTMIKGY 241
             + KG+
Sbjct: 689 NALFKGF 695



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 1/225 (0%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           +G + +A  +  +M  +G+  D   + VLI+   K G ++++  ++  M   G+     +
Sbjct: 488 IGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVT 547

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  L      RGR + AK  F+ M++ G+ P+  TY + +  +     L  A  +F  M 
Sbjct: 548 YTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKML 607

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             G+  + VTYN +++   R  + + A + F EM E+ + P   +YT +I G        
Sbjct: 608 EEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWV 667

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
            A+R++ EM    + P+  T+ AL  G  + G M +  + L  +V
Sbjct: 668 HAIRLYCEMHQKGIHPDHCTHNALFKGFGE-GHMYDAVQYLENVV 711



 Score = 43.9 bits (102), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 22/201 (10%)

Query: 457 ESYLRKGEPADAKT----ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
           E   +K  PA   T    A   M   G +P       V+  L +  R      V   M++
Sbjct: 163 ECQAQKSVPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQ 222

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLM--MQSGSVPN---FDSLLSVLSEKGKT 567
            GV+ ++     +L++    G +++A+  +  M    +G +PN   ++ +++ L+ KG+ 
Sbjct: 223 LGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGEL 282

Query: 568 IAAVKLLDFCLGRDCIIDLA------SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
             A +L+D       I+ L+      +Y  ++  LLA      A ++L ++  +G V   
Sbjct: 283 EKAAQLVD-------IMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTV 335

Query: 622 KSSDKLIAGLNQEGNTKQADI 642
            + + LI GL + GN + A +
Sbjct: 336 VTYNTLIDGLFKTGNAEAAQV 356


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 139/610 (22%), Positives = 259/610 (42%), Gaps = 90/610 (14%)

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ-LGVERSVKSYDALFKLILRRGRYMMAK 146
           ++ E    V++ ++ +  +   ++  F  +   LG    ++S++AL    +R  R+  A 
Sbjct: 80  RFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDAD 139

Query: 147 RYFNKMLSEG-----IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            +F   LS G     I P   TYN++L        L+ A+  F+ ++ R ++ D +TY+T
Sbjct: 140 AFFAS-LSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYST 198

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM-KSF 260
           ++ G  +  ++D A  L  EM    ++P V+ Y  ++ G       +  +R++D++ K  
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             +PN  TY  +L GLC  G+  EV +V   MV   + P D   +  L+   C+SG ++ 
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP-DVITYGILIHGLCRSGDVDG 317

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAE----------------------------- 351
           AA V   +I+  +  +A  Y  L++ FC+A                              
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKG 377

Query: 352 -----MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
                M D AI+L D L+EK++   P +       ++  +I  LC NG   KA   F + 
Sbjct: 378 LFDSGMVDEAIELWD-LLEKDVACIPDTV------TFGTLIHGLCQNGFANKAFTIFEEA 430

Query: 407 MKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
              G  LD  +++++I G    G    A ++ + M + G   ++  Y  LI  + +    
Sbjct: 431 RVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRT 490

Query: 466 ADA-------------------KTALDS----------------MIEDGHSPASSLFRSV 490
           +DA                    T +D                 M+E+G +P  + + S+
Sbjct: 491 SDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSL 550

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           +  LF D ++  A  + K ++ KG+K ++ +   ++  L   G V+EAL     M +  +
Sbjct: 551 IRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN 610

Query: 551 VP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
            P     +++L+  L E G    A  L           D+ SY   +  L +  +     
Sbjct: 611 CPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGI 670

Query: 607 SILFKIMEKG 616
            +L +++ +G
Sbjct: 671 QLLDEVLSRG 680



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/546 (21%), Positives = 244/546 (44%), Gaps = 20/546 (3%)

Query: 15  RALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P    +N+V   L    + + A+  F  + R  +   DR T+  ++  L +  +L+
Sbjct: 152 RRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQV-APDRITYSTLMCGLAKQDRLD 210

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD-IMKQLGVERSVKSYDAL 132
           HA  +L +MP+  VQ D   +  L+    K G  ++ ++++D ++K  G   ++ +Y+ +
Sbjct: 211 HALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVM 270

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + + GR+      + +M++  ++P   TY +++ G   S  ++ A R + ++   G+
Sbjct: 271 LDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGL 330

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
            +D   YN+++ G+ +  ++ EA K +       +   + +Y  MIKG       D+A+ 
Sbjct: 331 VIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIE 389

Query: 253 IFDEM-KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF--MKLL 309
           ++D + K     P+ VT+  L+ GLC  G      K      E  +  K   VF    ++
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNGF---ANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G L  A  V + M +      +  Y  LI  FC+      A+++  K+ +    
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD---- 502

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
               +       +YN +I  LC   +  +A    R++++ G   D   + +LIRG   + 
Sbjct: 503 ----NGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL-F 487
             D A  I K +  +G+  D   +  LI      G+  +A      M E  + P + + +
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTY 618

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++M+ L+E G +  A+ +  S+ E G++ ++      ++ L     + E +  +D ++ 
Sbjct: 619 NTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678

Query: 548 SGSVPN 553
            G +P 
Sbjct: 679 RGIIPT 684



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 150/355 (42%), Gaps = 42/355 (11%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           A   + A +F+     AGL N    T+  MI+ L   G ++ A   L D+ +K V    D
Sbjct: 347 AGRVQEAWKFWDSAGFAGLRN--LRTYNIMIKGLFDSGMVDEA-IELWDLLEKDVACIPD 403

Query: 93  M--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
              F  LI    + G   ++  IF+  +  G +  V SY ++   +   GR + A + + 
Sbjct: 404 TVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYE 463

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           KM  +G +P  H YN ++ GF    +   A+R +  M   G S  V+TYNT+I+G  + +
Sbjct: 464 KMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAE 523

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI----------------- 253
           K  EA  +  EM E    P + +Y ++I+G  + ++ DDAL I                 
Sbjct: 524 KYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHN 583

Query: 254 ------------------FDEMKS-FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
                             F +MK   +  PN VTY  L+ GL + G + +   +   + E
Sbjct: 584 ILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITE 643

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
             + P   S   ++ G+ C    ++    +L  ++   I      + IL+    K
Sbjct: 644 DGLEPDIISYNTRIKGL-CSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 38/284 (13%)

Query: 28  NVLHGAKNSEHALQFFRWVERAGLFNH--DRETHLKMIEILGRVGKLNHARCILLDMPKK 85
            ++HG   +  A + F   E A +     D  ++  MI  L  VG+L  A  +   M K 
Sbjct: 409 TLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKD 468

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G + +  ++  LI  + +     ++V+I+  M   G   +V +Y+ L   + +  +Y  A
Sbjct: 469 GCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA 528

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV--------- 196
                +M+  G  P   TY  ++ G F   K++ A+  ++ +  +G+ +DV         
Sbjct: 529 SSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHG 588

Query: 197 ---------------------------VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
                                      VTYNT+++G      +D+A  L+  + E  +EP
Sbjct: 589 LCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEP 648

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            +ISY T IKG  + +R  + +++ DE+ S  + P  +T+  L+
Sbjct: 649 DIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 240/563 (42%), Gaps = 48/563 (8%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L+ + DH LV  V+         +QFFRW  +   + HD  T++ +I  
Sbjct: 69  WGPDAEKALEVLMLKVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYEHDTSTYMALIRC 128

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDM-FEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           L  V +      ++ +M +  V     M    +I   G   ++ ++V IF  +K    + 
Sbjct: 129 LEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQP 188

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---------------------------- 156
           + ++Y+++  +++  G+Y      +N+M +EG                            
Sbjct: 189 TAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRL 248

Query: 157 --------IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
                   ++PT   Y +++  FF    +  A+  FE+M+ +    DV TY  +I G  +
Sbjct: 249 LNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGK 308

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             + DEA   F EM+ +   P  +    MI       R DDA+++F+EM +    P+ VT
Sbjct: 309 AGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVT 368

Query: 269 YTALLPGLCDA-GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           Y  ++  L ++  ++ E+      M    I P   +  + + G  CK+     A  +L+ 
Sbjct: 369 YNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGF-CKTNRTEKAMMLLEE 427

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M     P     Y  LI+   KA+ YD A +L  +L E        +     A  Y  MI
Sbjct: 428 MDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKE--------NCGSSSARVYAVMI 479

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
           +HL   G+   A   F ++ K G    V A+N L+ G ++ G  D A   ++ M   G  
Sbjct: 480 KHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCI 539

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D ++Y  ++    + G P  A   L +M +    P +  + +V+ ++   G  + A+++
Sbjct: 540 PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKL 599

Query: 507 MKSMVEKGVKENLDLVAKILEAL 529
           MK M   G + +L   + ILEA+
Sbjct: 600 MKEMNVLGFEYDLITYSSILEAI 622



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 206/465 (44%), Gaps = 20/465 (4%)

Query: 1   MAERAWTTRLQNKIRALVP--QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRET 58
           M  +A     Q K+R   P  Q  ++++  ++H  +  E   + +  +   G    D  T
Sbjct: 170 MISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQ-YEKVHELYNEMSNEGHCFPDTVT 228

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I    ++G+ + A  +L +M   G+Q    ++ +LI  + K   V  ++ +F+ M+
Sbjct: 229 YSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMR 288

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
                  V +Y  L + + + GR+  A  +F++M  EG  P     N M+     + +L+
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLD 348

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMING-YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            A++ FE+M +      VVTYNT+I   +    ++ E    F  MK   I P+  +Y+ +
Sbjct: 349 DAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSIL 408

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY- 296
           I G+    R + A+ + +EM      P    Y +L+  L  A +     ++ +E+ E   
Sbjct: 409 IDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCG 468

Query: 297 -IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
               +  +V +K LG   K+G L+ A ++   M +L        Y  L+    +A M D 
Sbjct: 469 SSSARVYAVMIKHLG---KAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDE 525

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP- 414
           A+  + ++ E   I         + +SYN ++  L   G   +A       MK+  + P 
Sbjct: 526 ALTTMRRMQEHGCIP--------DINSYNIILNGLAKTGGPHRAMEMLSN-MKQSAIKPD 576

Query: 415 -VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
            V++N ++   S  G  + A +++K M   G   D   Y  ++E+
Sbjct: 577 AVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEA 621



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 94/440 (21%), Positives = 189/440 (42%), Gaps = 21/440 (4%)

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS-FDVKPNAVT 268
           K + +A  +F ++K +  +PT  +Y +MI   +   + +    +++EM +     P+ VT
Sbjct: 169 KMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVT 228

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y+AL+   C  G+     ++L EM +  + P    ++  L+ +  K  +++ A  + + M
Sbjct: 229 YSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAK-IYTMLIALFFKLNNVHGALGLFEEM 287

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
                  +   Y  LI    KA  +D A     ++  +    RP + +       N MI 
Sbjct: 288 RHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGC--RPDTVV------INNMIN 339

Query: 389 HLCHNGQTGKAEIFFRQL-MKKGVLDPVAFNNLIRG----HSKEGNPDSAFEIVKIMGRR 443
            L   G+   A   F ++   + +   V +N +I+      S+     S FE +K     
Sbjct: 340 FLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMK---GS 396

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+      Y  LI+ + +      A   L+ M E G  P  + + S++++L +  R   A
Sbjct: 397 GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIA 456

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             + + + E     +  + A +++ L   G +++A+   D M + G  PN   +++L+S 
Sbjct: 457 HELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSG 516

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L+  G    A+  +       CI D+ SY  +L+ L   G    A  +L  + +     D
Sbjct: 517 LARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPD 576

Query: 621 WKSSDKLIAGLNQEGNTKQA 640
             S + ++  ++  G  ++A
Sbjct: 577 AVSYNTVLGAMSHAGLFEEA 596



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 134/311 (43%), Gaps = 15/311 (4%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI      E Y    K++ ++V   + +       ME S    +I+ L +     KA
Sbjct: 122 YMALIRCLEVVEQYGEMWKMIQEMVRNPVCV----VTPMELSD---IIRMLGNAKMISKA 174

Query: 400 -EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG--VPRDADAYICLI 456
             IF++  ++K      A+N++I     EG  +   E+   M   G   P D   Y  LI
Sbjct: 175 VAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFP-DTVTYSALI 233

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
            ++ + G    A   L+ M ++G  P + ++  ++   F+   V  A  + + M  +  +
Sbjct: 234 SAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCR 293

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            ++    +++  L   G  +EA      M + G  P+    +++++ L + G+   AVKL
Sbjct: 294 PDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKL 353

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK-SSDKLIAGLN 632
            +      CI  + +Y  ++ AL  +   ++  S  F+ M+  G++    +   LI G  
Sbjct: 354 FEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFC 413

Query: 633 QEGNTKQADIL 643
           +   T++A +L
Sbjct: 414 KTNRTEKAMML 424


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 145/644 (22%), Positives = 270/644 (41%), Gaps = 18/644 (2%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W   L++ +          LV  V+   K+   AL +FRWVER     H  E +  ++ +
Sbjct: 82  WGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFRWVERKTKQLHSPEAYNALLML 141

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           + R   L +   IL +M   G     +    ++ S+ K   ++E+  + + M++     +
Sbjct: 142 MARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPA 201

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y  L   +              +M   G E T H +  ++  F    +++ A+   +
Sbjct: 202 YSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLD 261

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +MKS   + D+V YN  I+ + +  K+D A K F E+K + + P  +++T+MI      E
Sbjct: 262 EMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAE 321

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNS 303
           R D+A+ +F+E+ S    P    Y  ++ G    GK  E   +L     +   P     +
Sbjct: 322 RVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYN 381

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
             +  LG   + G +  A  +L+AM ++        Y ILI+  CKA   + A+K+ D +
Sbjct: 382 CILTCLG---RKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSM 437

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIR 422
             KE  L P         + N MI  LC   +  +A  IF     K    D V F +LI 
Sbjct: 438 --KEAGLFPNII------TVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLID 489

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  + G  + A+ + + M   G   +A  Y  LI ++ + G   D       M+  G SP
Sbjct: 490 GLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSP 549

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
              L  + M+ +F+ G ++    + + +  +G+  ++   + ++  L+  G  ++     
Sbjct: 550 DLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLF 609

Query: 543 DLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             M + G       ++ ++    + GK   A +LL+    +     + +Y  V+D L   
Sbjct: 610 YEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKI 669

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            +   AY +  +   K    +      LI G  + G   +A ++
Sbjct: 670 DRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLI 713



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 200/424 (47%), Gaps = 14/424 (3%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N++ + L  A+  + A   F  ++   +   D  T   +I+ LGR GK+N A  +   M 
Sbjct: 450 NIMIDRLCKAQRLDEACSIFLGLDHK-VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKML 508

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
             G   +  ++  LI ++ K G  ++  KI+  M   G    +   +     + + G   
Sbjct: 509 DSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIE 568

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
             +  F ++ ++G+ P   +Y++++ G       +   + F +MK +G+ LD   YN +I
Sbjct: 569 KGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVI 628

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G+ +  K+++A +L  EMK K ++PTV++Y ++I G   ++R D+A  +F+E KS  V 
Sbjct: 629 DGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVD 688

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N V Y++L+ G    G++ E   +L E++++ + P +   +  LL    K+  ++ A  
Sbjct: 689 LNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTP-NTYTWNCLLDALVKAEEIDEALV 747

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
             + M  L  P     Y I++   CK   +++A     ++ ++   L+P +       +Y
Sbjct: 748 CFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQG--LKPNTI------TY 799

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPVAFNNLIRGHSKEGNPDSA---FEIVKI 439
             MI  L   G   +A+  F +     G+ D   +N +I G S       A   FE  ++
Sbjct: 800 TTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRL 859

Query: 440 MGRR 443
            G R
Sbjct: 860 KGCR 863



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 142/661 (21%), Positives = 288/661 (43%), Gaps = 54/661 (8%)

Query: 5   AWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVER----AGLFNHDRETH 59
           AW    + K + LVP       +  VL  A+  + A++ F  ++       ++ ++    
Sbjct: 291 AWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYN---- 346

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             MI   G VGK N A  +L    +KG       +  ++   G+KG V+E+++I + MK 
Sbjct: 347 -TMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK- 404

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           +    ++ SY+ L  ++ + G    A +  + M   G+ P   T N+M+     + +L+ 
Sbjct: 405 MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDE 464

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A   F  +  +  + D VT+ ++I+G  R  K+++A  L+ +M +    P  + YT++I+
Sbjct: 465 ACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIR 524

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
            +    R +D  +I+ EM      P+ +     +  +  AG++ + + +  E+  + + P
Sbjct: 525 NFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTP 584

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
              S  + + G+  K G       +   M    +  +   Y I+I+ FCK+   ++A +L
Sbjct: 585 DVRSYSILIHGL-VKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQL 643

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
           L+++  K   L+P         +Y  +I  L    +  +A + F +   K V L+ V ++
Sbjct: 644 LEEMKTKG--LQPTVV------TYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYS 695

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           +LI G  K G  D A+ I++ + ++G+  +   + CL+++ ++  E  +A     +M   
Sbjct: 696 SLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNL 755

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
              P    +  ++  L +  +   A    + M ++G+K N      ++  L   G+V EA
Sbjct: 756 KCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEA 815

Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
               +    SG +P                                D A Y  +++ L  
Sbjct: 816 KDLFERFKSSGGIP--------------------------------DSACYNAMIEGLSN 843

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKE 658
           A K ++AY +  +   KG     K+   L+  L++    +QA I+  ++R EM++     
Sbjct: 844 ANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLR-EMAKSQHAT 902

Query: 659 K 659
           +
Sbjct: 903 R 903



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 146/631 (23%), Positives = 275/631 (43%), Gaps = 26/631 (4%)

Query: 27  YNVLHGAKNSEHA----LQFFRWVERAGLFNHDRETHL--KMIEILGRVGKLNHARCILL 80
           Y  L GA ++ H     L   R ++  G   ++   HL   +I +  R G+++ A  +L 
Sbjct: 205 YTTLIGALSAAHEADPMLTLLRQMQEIG---YEVTVHLFTTLICVFAREGRVDAALSLLD 261

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M       D  ++ V I+ +GK G V  + K F  +K  G+     ++ ++  ++ +  
Sbjct: 262 EMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAE 321

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A   F ++ S    P  + YN M+ G+    K   A    E  K +G    V+ YN
Sbjct: 322 RVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYN 381

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            ++    R  K++EA ++   MK  +  P + SY  +I         + AL++ D MK  
Sbjct: 382 CILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEA 440

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + PN +T   ++  LC A ++ E   +   +  +   P D+  F  L+    + G +N 
Sbjct: 441 GLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTP-DSVTFCSLIDGLGRHGKVND 499

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  + + M+       A  Y  LI NF K    +   K     + KE++ R  S   M  
Sbjct: 500 AYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHK-----IYKEMMHRGCSPDLMLL 554

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKI 439
           ++Y   +  +   G+  K    F ++  +G+   V +++ LI G  K G     +++   
Sbjct: 555 NNY---MDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYE 611

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  +G+  D  AY  +I+ + + G+   A   L+ M   G  P    + SV++ L +  R
Sbjct: 612 MKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDR 671

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           +  A  + +    K V  N+ + + +++     G ++EA   ++ +MQ G  PN   ++ 
Sbjct: 672 LDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNC 731

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           LL  L +  +   A+          C  +  +Y  +++ L    K  N   + ++ M+K 
Sbjct: 732 LLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRK-FNKAFVFWQEMQKQ 790

Query: 617 GV-TDWKSSDKLIAGLNQEGNTKQA-DILSR 645
           G+  +  +   +I+GL + GN  +A D+  R
Sbjct: 791 GLKPNTITYTTMISGLARVGNVLEAKDLFER 821



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 192/457 (42%), Gaps = 68/457 (14%)

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV-------------- 267
           +K + +  TV     ++  Y      +DAL  FDEM   ++    +              
Sbjct: 61  LKSEGMRKTVHDVCRVLDTYPWGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFR 120

Query: 268 -------------TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
                         Y ALL  +     +  ++++L EM      P +N+  ++++    K
Sbjct: 121 WVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTC-IEMVASFVK 179

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE--KEIILRP 372
           S  L  A  V++ M +         Y  LI     A   D  + LL ++ E   E+ +  
Sbjct: 180 SRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHL 239

Query: 373 QSTL------------------DMEASSYNP--MIQHLCHN--GQTGKAEI---FFRQLM 407
            +TL                  +M+++S+N   ++ ++C +  G+ GK ++   FF +L 
Sbjct: 240 FTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELK 299

Query: 408 KKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM-GRRGVPRDADAYICLIESYLRKGEP 465
            +G++ D V F ++I    K    D A E+ + +   + VP    AY  +I  Y   G+ 
Sbjct: 300 SQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPC-VYAYNTMIMGYGSVGKF 358

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            +A + L+     G  P+   +  ++  L   G+V+ A R++++M +     NL     +
Sbjct: 359 NEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNIL 417

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFC---LGRD- 581
           ++ L   G +E AL   D M ++G  PN   +++V     +   A +L + C   LG D 
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLFPN---IITVNIMIDRLCKAQRLDEACSIFLGLDH 474

Query: 582 --CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
             C  D  ++  ++D L   GK  +AY +  K+++ G
Sbjct: 475 KVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG 511


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 151/651 (23%), Positives = 290/651 (44%), Gaps = 42/651 (6%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           +V   D+  + N L     +E A  F   + + G      ++H+    +LG    LN   
Sbjct: 192 VVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFV---LDSHIGTSLLLGFCRGLNLRD 248

Query: 77  CI-LLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            + + D+  K V    +   + +LI    + G ++E+  + D M + G + S ++Y  L 
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           K +  RG    A   F++M+  G +P  HTY V++ G     K+E A      M    I 
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
             V+TYN +INGY +  ++  A +L   M+++  +P V ++  +++G   V +   A+ +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
              M    + P+ V+Y  L+ GLC  G M    K+L  M    I P D   F  ++   C
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP-DCLTFTAIINAFC 487

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G  + A+  L  M+R  I  +      LI+  CK      A+ +L+ LV+  I+  P 
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDS 432
                   S N ++  L    +  +      ++ K G++   V +  L+ G  + G+   
Sbjct: 548 --------SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           +F I+++M   G   +   Y  +I    + G   +A+  L +M + G SP    +  +++
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR----GHVEEALGRIDLMMQS 548
               +G++  A   +++MVE+G + N  + + +L+  ++      + EE+    D+ ++ 
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVS-DIALRE 718

Query: 549 GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC--------------IIDLASY-EKVL 593
                 + L+SV+ + G  I+   L  F + R C              +++   + EK +
Sbjct: 719 TDPECINELISVVEQLGGCISG--LCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM 776

Query: 594 DALL----AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D ++    +  K      ++  +++ G V  +KS   +I GL +EG+ ++A
Sbjct: 777 DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 145/664 (21%), Positives = 297/664 (44%), Gaps = 41/664 (6%)

Query: 11  QNKIRALVPQFDHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
            + +++LV   + N+   V+   + +++  ++FF WV +   +  D     ++++++   
Sbjct: 57  NSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSS 116

Query: 70  GKLNHARCILLDMPKKGVQWDEDM------FEVLIESYGKK------GIVQESVKIFDI- 116
           G    A  +++ + K+  + +++M      F+ L E +G +        +  S+   D+ 
Sbjct: 117 GLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLG 176

Query: 117 ---------MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
                    M+  G    +  Y  +   + + G    A+ + +K+L  G     H    +
Sbjct: 177 FLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSL 236

Query: 168 LWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           L GF   L L  A++ F+ M K    + + V+Y+ +I+G     +++EA  L  +M EK 
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P+  +YT +IK        D A  +FDEM     KPN  TYT L+ GLC  GK+ E  
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            V R+MV+  I P   + +  L+   CK G +  A ++L  M + +       +  L+E 
Sbjct: 357 GVCRKMVKDRIFPSVIT-YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C+     +A+ LL ++++        + L  +  SYN +I  LC  G    A      +
Sbjct: 416 LCRVGKPYKAVHLLKRMLD--------NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467

Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
               +  D + F  +I    K+G  D A   + +M R+G+  D      LI+   + G+ 
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            DA   L+++++            +++ L +  +V+    ++  + + G+  ++     +
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           ++ L+  G +  +   ++LM  SG +PN   +  +++ L + G+   A KLL        
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG--LNQEG--NTK 638
             +  +Y  ++   +  GK   A   +  ++E+G   + +    L+ G  L+Q+G  N++
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSE 707

Query: 639 QADI 642
           ++ +
Sbjct: 708 ESTV 711



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/460 (19%), Positives = 198/460 (43%), Gaps = 11/460 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T  +++E L RVGK   A  +L  M   G+  D   + VLI+   ++G +  + K+   M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
               +E    ++ A+     ++G+  +A  +   ML +GI     T   ++ G     K 
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+   E +    I     + N +++  ++  K+ E   +  ++ +  + P+V++YTT+
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G +       + RI + MK     PN   YT ++ GLC  G++ E +K+L  M +  +
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC--------- 348
            P ++  +  ++     +G L+ A + ++AM+          Y  L++ F          
Sbjct: 648 SP-NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNS 706

Query: 349 -KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
            ++ + D A++  D     E+I   +      +     ++  LC  G+T ++    + ++
Sbjct: 707 EESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVL 766

Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           ++GV    A + ++  +  +       E++ ++ + G      ++  +I+   ++G+   
Sbjct: 767 ERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAER 826

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           A+  +  ++        S   + +E L E       S V+
Sbjct: 827 ARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVI 866


>gi|22325737|ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g17525, mitochondrial; Flags: Precursor
 gi|330251547|gb|AEC06641.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 626

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 142/639 (22%), Positives = 277/639 (43%), Gaps = 67/639 (10%)

Query: 18  VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           VP  DH  +  ++   K++  AL+ FRW      F H R T+  +   L    + +    
Sbjct: 40  VPSDDH--IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQ 97

Query: 78  ILLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
           +L +MP   G+  D+ +F  +I  +G+  +++  + + D++ + G++ S+K ++++  ++
Sbjct: 98  LLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL 157

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
           ++    +  + +  KM++ GI    +TY +++ G  L+ ++    +  + MK+ G++ + 
Sbjct: 158 VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNA 217

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           V YNT+++   +  K+  A  L +EMK    EP  +++  +I  Y   ++   ++ + ++
Sbjct: 218 VVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEK 273

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
             S    P+ VT T ++  LC+ G++ E  +VL E VE      D      L+   C  G
Sbjct: 274 CFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVL-ERVESKGGKVDVVACNTLVKGYCALG 332

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            +  A      M R         Y +LI  +C   M D A+   + +            +
Sbjct: 333 KMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM--------KTDAI 384

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-----LDPVAFNNLIRGHSKEGNPD 431
               +++N +I+ L   G+T         +          +DP  +N +I G  KE   +
Sbjct: 385 RWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP--YNCVIYGFYKENRWE 442

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A E +  M  +  PR  D    LI S   KG   D KTA D MI +G  P+  +   ++
Sbjct: 443 DALEFLLKM-EKLFPRAVDRSFKLI-SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLI 500

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
               + G++                                   EE+L  I+ M+  G +
Sbjct: 501 HRYSQHGKI-----------------------------------EESLELINDMVTRGYL 525

Query: 552 P---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P    F++++    ++ K +  +K ++    R C+ D  SY  +L+ L   G    A+ +
Sbjct: 526 PRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLL 585

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEG----NTKQADIL 643
             +++EK  V D      L+  L+Q+     N+   DI+
Sbjct: 586 FSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQDII 624


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 218/465 (46%), Gaps = 12/465 (2%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++ +F  M +     S+  ++ L   I++  +Y +      KM   GI    +T+N+
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    ++  A+     M   G   D VT  +++NG+ R  ++ +A  L  +M E  
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
             P +++Y  +I       R +DAL  F E+    ++PN VTYTAL+ GLC++G+  +  
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           ++LR+M++R I P +   +  LL    K+G +  A ++ + M+R+SI  +   Y  LI  
Sbjct: 246 RLLRDMIKRKITP-NVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C  +  D A ++ D +V K     P      +  SYN +I   C   +       FR++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCF--P------DVVSYNTLINGFCKAKRVEDGMKLFRKM 356

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            ++G++ + V +N LI+G  + G+ D A E    M   GV  D   Y  L+      G  
Sbjct: 357 SQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLL 416

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A    + M +         + +V++ + + G+V+ A  +  S+  KG+K ++     +
Sbjct: 417 EKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTM 476

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAA 570
           +  L  +G   E       M Q G + N DS+L  L +   TI+A
Sbjct: 477 MSGLCTKGLQHEVEALYTKMKQEGLMKN-DSMLC-LGDGDITISA 519



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 226/473 (47%), Gaps = 19/473 (4%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           K R      D N + + +   K  +  +   + +E  G+ N D  T   +I       ++
Sbjct: 78  KTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRN-DLYTFNIVINCFCCCFQV 136

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  +L  M K G + D      L+  + ++  V ++V + D M ++G    + +Y+A+
Sbjct: 137 SLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAI 196

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + +  R   A  +F ++  +GI P   TY  ++ G   S +   A R   DM  R I
Sbjct: 197 IDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKI 256

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
           + +V+TY+ +++ + +  K+ EA+++F EM   +I+P +++Y+++I G    +R D+A +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGV 311
           +FD M S    P+ V+Y  L+ G C A ++ +  K+ R+M +R +   +N+V +  L+  
Sbjct: 317 MFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV--NNTVTYNTLIQG 374

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
             + G ++ A +    M    +  +   Y IL+   C   + ++A+ + + + + E    
Sbjct: 375 FFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSE---- 430

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNP 430
               +D++  +Y  +IQ +C  G+   A   F  L  KG+  D V +  ++ G   +G  
Sbjct: 431 ----MDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQ 486

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
                +   M + G+ ++ D+ +CL +     G+   +   +  M+  G++P+
Sbjct: 487 HEVEALYTKMKQEGLMKN-DSMLCLGD-----GDITISAELIKKMLSCGYAPS 533



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 98/479 (20%), Positives = 199/479 (41%), Gaps = 46/479 (9%)

Query: 175 LKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           +KL  AI  F +M K+R     +V +N +++   + KK D    L  +M+   I   + +
Sbjct: 64  IKLHDAINLFREMVKTRPFP-SIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           +  +I  +    +   AL +  +M     +P+ VT  +L+ G C   ++ +   ++ +MV
Sbjct: 123 FNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           E    P D   +  ++   CK+  +N A D  K + R  I      Y  L+   C +  +
Sbjct: 183 EIGYRP-DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
           + A +LL  +++++I   P         +Y+ ++     NG+  +A+  F ++++  + D
Sbjct: 242 NDAARLLRDMIKRKIT--PN------VITYSALLDAFVKNGKVLEAKEIFEEMVRMSI-D 292

Query: 414 P--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           P  V +++LI G       D A ++  +M  +G   D  +Y  LI  + +     D    
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKL 352

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
              M + G    +  + ++++  F+ G V  A      M   GV  ++     +L  L  
Sbjct: 353 FRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCD 412

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
            G +E+AL   + M +S                                +  +D+ +Y  
Sbjct: 413 NGLLEKALVIFEDMQKS--------------------------------EMDLDIVTYTT 440

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           V+  +   GK  +A+ +   +  KG   D  +   +++GL  +G   + + L   ++ E
Sbjct: 441 VIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQE 499


>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
 gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
          Length = 523

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 199/405 (49%), Gaps = 13/405 (3%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKN-SEHALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           L+  + A   +   NLV  VL   KN    A +FF W +R   F H  E++  ++ ILG 
Sbjct: 65  LETSLNAFSSEISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSEESYHILVNILGT 124

Query: 69  VGKLNHARCILLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
             +       L++M +    + ++++  ++  SY +  +  ++++ FD M + G+  SV 
Sbjct: 125 SRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAEFGLRPSVD 184

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
             D L  ++ +      A+++F++ +    E    TY++++ G+    +   A + F++M
Sbjct: 185 DLDKLLYVLCKCKHVKCAQQFFDR-VKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEM 243

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           + RG +LDV+ YN+++    +   +DEA K+F E+    +EP   SY   I+ Y      
Sbjct: 244 RGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNI 303

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
                + D MK +D+ PN  TY  ++  LC  GK+ +  ++L EM+ER + P D   +  
Sbjct: 304 HSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSP-DAWSYNT 362

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           +L   C+   +N A  ++  M++ +   +   Y +L++   +   +DRA ++ + + E+ 
Sbjct: 363 ILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERG 422

Query: 368 IILRPQSTLDMEASSYNPMIQHLC-HNGQTGKAEIFFRQLMKKGV 411
               P        S+Y+ MI  LC   G+  +A  +F  ++ +G+
Sbjct: 423 FY--PS------VSTYSVMIHGLCKKKGKLEEACRYFETMIDEGI 459



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 8/313 (2%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           A RA+    +  +R  V   D  L+Y VL   K+ + A QFF  V+    F    +T+  
Sbjct: 167 AIRAFDRMAEFGLRPSVDDLD-KLLY-VLCKCKHVKCAQQFFDRVKHK--FEAKAKTYSI 222

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++   G +G+   AR +  +M  +G   D   +  L+E+  K G V E+ K+F  +   G
Sbjct: 223 LVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHG 282

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           VE    SY    +               ++M    + P   TYN ++     + K+E A 
Sbjct: 283 VEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAY 342

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +   +M  RG+S D  +YNT++  +    +++ A KL + M + N  P   SY  ++K  
Sbjct: 343 QLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLL 402

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC-DAGKMVEVQKVLREMVERYIPPK 300
           V V R D A  I++ M      P+  TY+ ++ GLC   GK+ E  +    M++  IPP 
Sbjct: 403 VRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPY 462

Query: 301 DNSVFM---KLLG 310
            +++ M   +L+G
Sbjct: 463 ASTIEMLRNRLIG 475



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 2/277 (0%)

Query: 64  EILGRVGKLNHARCI--LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++L  + K  H +C     D  K   +     + +L+  +G  G   E+ K+FD M+  G
Sbjct: 188 KLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRG 247

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               V +Y++L + + + G    A + F ++ S G+EP   +Y + +  +  +  + +  
Sbjct: 248 CALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVF 307

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              + MK   +  +V TYN +I    +  K+++A +L  EM E+ + P   SY T++  +
Sbjct: 308 SVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYH 367

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 + A ++   M   +  P+  +Y  LL  L   G+     ++   M ER   P  
Sbjct: 368 CEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSV 427

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           ++  + + G+  K G L  A    + MI   IP  A 
Sbjct: 428 STYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYAS 464



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/412 (21%), Positives = 170/412 (41%), Gaps = 49/412 (11%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK-SRGISLDVVTYNTMINGYNRFKKMDE 214
           G E +  +Y++++     S +      F  +M+ S    ++      +   Y+R     +
Sbjct: 107 GFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSD 166

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS-FDVKPNAVTYTALL 273
           A + F  M E  + P+V     ++      +    A + FD +K  F+ K  A TY+ L+
Sbjct: 167 AIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAK--AKTYSILV 224

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G  D G+ VE +KV  EM  R     D   +  LL   CK G+++ A  + + +    +
Sbjct: 225 RGWGDIGEAVEARKVFDEMRGRGCA-LDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGV 283

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +A  Y I I  +C+A        +LD++   +++  P         +YN +I+ LC N
Sbjct: 284 EPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLV--PN------VFTYNCIIKKLCKN 335

Query: 394 GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
                                             G  + A++++  M  RGV  DA +Y 
Sbjct: 336 ----------------------------------GKVEDAYQLLHEMMERGVSPDAWSYN 361

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            ++  +    E   A   +  M++D   P    +  +++ L   GR   A+ + +SM E+
Sbjct: 362 TILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGER 421

Query: 514 GVKENLDLVAKILEALL-MRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEK 564
           G   ++   + ++  L   +G +EEA    + M+  G +P + S + +L  +
Sbjct: 422 GFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEG-IPPYASTIEMLRNR 472



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 139/317 (43%), Gaps = 16/317 (5%)

Query: 319 NAAADVLKAMIRLS---IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           N  +D ++A  R++   +         L+   CK +    A +  D++  K         
Sbjct: 162 NLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK--------- 212

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
            + +A +Y+ +++     G+  +A   F ++  +G  LD +A+N+L+    K GN D A+
Sbjct: 213 FEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAY 272

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           ++ + +G  GV  DA +Y   I +Y          + LD M      P    +  +++ L
Sbjct: 273 KMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKL 332

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            ++G+V+ A +++  M+E+GV  +      IL        V  A   I +M++   +P+ 
Sbjct: 333 CKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDR 392

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++ LL +L   G+   A ++ +    R     +++Y  ++  L      L      F+
Sbjct: 393 HSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFE 452

Query: 612 IMEKGGVTDWKSSDKLI 628
            M   G+  + S+ +++
Sbjct: 453 TMIDEGIPPYASTIEML 469



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 124/293 (42%), Gaps = 11/293 (3%)

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
           ++  ++ +A +   AI+  D++ E    LRP S  D++      ++  LC       A+ 
Sbjct: 153 LVFRSYSRANLPSDAIRAFDRMAE--FGLRP-SVDDLDK-----LLYVLCKCKHVKCAQQ 204

Query: 402 FFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           FF ++  K       ++ L+RG    G    A ++   M  RG   D  AY  L+E+  +
Sbjct: 205 FFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCK 264

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
            G   +A      +   G  P +  +   + +  E   + +   V+  M    +  N+  
Sbjct: 265 GGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFT 324

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL 578
              I++ L   G VE+A   +  MM+ G  P+   ++++L+   E  +   A KL+   +
Sbjct: 325 YNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMV 384

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
             +C+ D  SY  +L  L+  G+   A  I   + E+G      +   +I GL
Sbjct: 385 KDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGL 437



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 2/191 (1%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+ L + GK+  A  +L +M ++GV  D   +  ++  + +   V  + K+  IM
Sbjct: 324 TYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIM 383

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL-K 176
            +        SY+ L KL++R GR+  A   +  M   G  P+  TY+VM+ G      K
Sbjct: 384 VKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGK 443

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           LE A R+FE M   GI     T   + N    F  +D  E L  +M E+    ++     
Sbjct: 444 LEEACRYFETMIDEGIPPYASTIEMLRNRLIGFGLLDHIEILACKM-ERGTSCSIQELAK 502

Query: 237 MIKGYVAVERA 247
            ++G  A  R+
Sbjct: 503 EMRGNKACVRS 513


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 199/392 (50%), Gaps = 15/392 (3%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G+  +  ++  LI    + G ++E+V +FD M   G++ +V +Y++L     R G
Sbjct: 104 EMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFG 163

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
            +  A R F++M+ EGI P   T+  ++       K++ A + FE M  +G + ++VTYN
Sbjct: 164 LWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYN 223

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           +++NG     +MD A +LF  M E+ I+  VISY T+I GY    + ++A+ +F +M+  
Sbjct: 224 SLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYE 283

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           ++ P+  TYT LL  L   G++   +++   M      P  ++  + L G+ CK+G +  
Sbjct: 284 ELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGL-CKNGCIEE 342

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A DV +++  +        Y ILI    +A  ++ A+++ D++        P   L    
Sbjct: 343 AIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEI--------PTVGLVPNI 394

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +YN MI  LC  G+  +AE  F Q+ + G   D ++FN +IRG  +E     A E +K 
Sbjct: 395 VTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKR 454

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           M  +    +    + L+  Y      ADA+++
Sbjct: 455 MREKNFSPNDSVTLMLVNLY-----AADAQSS 481



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/499 (22%), Positives = 218/499 (43%), Gaps = 49/499 (9%)

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G +P   T + ++ G     K+  A+  F+ M   G   D++ Y  +IN   + ++ 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
             A +L   M  +       +Y  +I        A   L++F EM +  + PN + Y++L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GLC  GK+ E   +  EMV + I                        A+V+       
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIK-----------------------ANVIT------ 151

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
                  Y  LI   C+  ++  A +   ++V + I+  P      +  ++  +I HL  
Sbjct: 152 -------YNSLIHASCRFGLWKEATRTFSQMVGEGIL--P------DVVTFTTLIDHLSK 196

Query: 393 NGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+  +A   F  ++K+G   + V +N+L+ G       D A  + ++M  RG+  D  +
Sbjct: 197 KGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVIS 256

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI  Y   G+  +A T    M  +  +P+ + +  ++++L+++GR++TA  +  +M 
Sbjct: 257 YNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQ 316

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALG---RIDLMMQSGSVPNFDSLLSVLSEKGKTI 568
             G   +LD    +L+ L   G +EEA+     +  +    S+  +  L+  + +  +  
Sbjct: 317 ICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWE 376

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
           +A+++ D       + ++ +Y  +++ L   GK L A  +  ++ E G   D  S + +I
Sbjct: 377 SAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFII 436

Query: 629 AGLNQEGNTKQA-DILSRM 646
            G  QE   ++A + L RM
Sbjct: 437 RGFLQENQVQKAMEFLKRM 455



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 198/450 (44%), Gaps = 10/450 (2%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK+  A  +   M + G Q D  ++  LI +  K    + +V++   M       +  +Y
Sbjct: 23  GKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTY 82

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             +   + + G  +   + F +M++ GI P    Y+ ++ G     KL  A+  F++M S
Sbjct: 83  GLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVS 142

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +GI  +V+TYN++I+   RF    EA + F++M  + I P V+++TT+I       +  +
Sbjct: 143 QGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQE 202

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A +IF+ M      PN VTY +LL GLC   +M    ++   MVER I   D   +  L+
Sbjct: 203 AYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKI-DVISYNTLI 261

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C SG    A  + + M    +      Y IL+    KA   +  I+   +L     I
Sbjct: 262 NGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILL----KALYQNGRIRTAKELFNNMQI 317

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEG 428
                +LD    +Y  ++  LC NG   +A   FR L        +  ++ LI G  +  
Sbjct: 318 CGQSPSLD----TYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQAR 373

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             +SA EI   +   G+  +   Y  +I    ++G+  +A+     M E G       F 
Sbjct: 374 RWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFN 433

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
            ++    ++ +VQ A   +K M EK    N
Sbjct: 434 FIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 35/272 (12%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I    R G    A      M  +G+  D   F  LI+   KKG VQE+ KIF++M
Sbjct: 151 TYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELM 210

Query: 118 KQLG-------------------------------VERSVK----SYDALFKLILRRGRY 142
            + G                               VER +K    SY+ L       G+ 
Sbjct: 211 IKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKT 270

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   F KM  E + P+  TY ++L   + + ++ TA   F +M+  G S  + TY  +
Sbjct: 271 EEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVL 330

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++G  +   ++EA  +F  +K    +P++  Y+ +I G     R + A+ IFDE+ +  +
Sbjct: 331 LDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGL 390

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            PN VTY  ++ GLC  GK++E +++  +M E
Sbjct: 391 VPNIVTYNIMINGLCKEGKLLEAERLFVQMEE 422



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 115/236 (48%)

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           +++HA  +   M ++G++ D   +  LI  Y   G  +E++ +F  M+   +  S+ +Y 
Sbjct: 234 QMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYT 293

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L K + + GR   AK  FN M   G  P+  TY V+L G   +  +E AI  F  +KS 
Sbjct: 294 ILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSI 353

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
                +  Y+ +I G  + ++ + A ++F E+    + P +++Y  MI G     +  +A
Sbjct: 354 KYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEA 413

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            R+F +M+    + + +++  ++ G     ++ +  + L+ M E+   P D+   M
Sbjct: 414 ERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLM 469



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 103/208 (49%), Gaps = 1/208 (0%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            +N + N    +  +E A+  FR ++   L      T+  +++ L + G++  A+ +  +
Sbjct: 256 SYNTLINGYCTSGKTEEAMTLFRKMQYEEL-TPSITTYTILLKALYQNGRIRTAKELFNN 314

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G     D + VL++   K G ++E++ +F  +K +  + S++ Y  L   + +  R
Sbjct: 315 MQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARR 374

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A   F+++ + G+ P   TYN+M+ G     KL  A R F  M+  G   D +++N 
Sbjct: 375 WESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNF 434

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           +I G+ +  ++ +A +    M+EKN  P
Sbjct: 435 IIRGFLQENQVQKAMEFLKRMREKNFSP 462



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 121/281 (43%), Gaps = 11/281 (3%)

Query: 381 SSYNP-------MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
           S Y P       +++ +C  G+   A   F ++ + G   D + +  LI    K      
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A E+ + M       +   Y  +I+S  + G           MI  G  P   ++ S++ 
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
            L   G+++ A  +   MV +G+K N+     ++ A    G  +EA      M+  G +P
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILP 182

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +   F +L+  LS+KGK   A K+ +  + +    ++ +Y  +L+ L    +  +A  + 
Sbjct: 183 DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLF 242

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
             ++E+G   D  S + LI G    G T++A  L R ++ E
Sbjct: 243 EVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYE 283


>gi|413935336|gb|AFW69887.1| hypothetical protein ZEAMMB73_120375 [Zea mays]
          Length = 453

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 195/390 (50%), Gaps = 34/390 (8%)

Query: 144 MAKRYFNKMLS-----EGIEPTRHTYNVMLWGFFLSLKLETA---IRFFEDM-KSRGISL 194
           ++   FN +L+      G  P   T N ++ G   +    +A   +R F  + ++   + 
Sbjct: 28  LSPHSFNSLLAALLRCPGASPDVATLNTLIHGLSTASPCPSAPALLRLFRFLPEAYAFAP 87

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMK------EKNIEPTVISYTTMIKGYVAVERAD 248
           D +TYN+M+    R   +  A +LF  M+      E    P V++YTTMI+   A   AD
Sbjct: 88  DAITYNSMLAALCRAGDLATARRLFDGMRVGEQGGEAGAFPNVVTYTTMIRACCARRLAD 147

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +AL +F  M    V+PN +TY  ++ G C AG+M  V++V    ++ + P  D   F  L
Sbjct: 148 EALSLFKMMLVEGVRPNRITYNTMMQGFCQAGRMELVKEVFG--MDSFKP--DTCTFNTL 203

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   C+ G +  A  V    + L +  ++  Y I+    C+   + RA +L+D L+EKE+
Sbjct: 204 MAAHCREGRIQDAKKVFDQTMELRVRRDSASYSIVTRALCENGEFGRAEELVDSLLEKEV 263

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKE 427
           + +    + + A  YNP+ ++LC NG+  KA + F QL+  +  +D +AF  LI GH KE
Sbjct: 264 LKKRGGCVPLIA-YYNPVFKYLCENGKAKKARLLFGQLLDIRSKVDFLAFKTLILGHCKE 322

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIES------YLRKGEPADAKTALDSMIEDGHS 481
            + +  +E+V  M +R +  D++ YI +I +       LRK    +   A+ S + DG S
Sbjct: 323 EDFEQGYELVLSMLKRDLMPDSECYIAVINAAEFSLFSLRKRH--ELGVAVHSQVLDGTS 380

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMV 511
            A  LF  ++E+     +  +A  V +S+V
Sbjct: 381 EAFQLFYELIEN-----KSTSAGAVPRSLV 405



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 124/313 (39%), Gaps = 42/313 (13%)

Query: 40  LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIE 99
           L+ FR++  A  F  D  T+  M+  L R G L  AR  L D  + G            E
Sbjct: 73  LRLFRFLPEAYAFAPDAITYNSMLAALCRAGDLATAR-RLFDGMRVG------------E 119

Query: 100 SYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
             G+ G     V    +++     R      +LFK+                ML EG+ P
Sbjct: 120 QGGEAGAFPNVVTYTTMIRACCARRLADEALSLFKM----------------MLVEGVRP 163

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
            R TYN M+ GF  + ++E     F  M S     D  T+NT++  + R  ++ +A+K+F
Sbjct: 164 NRITYNTMMQGFCQAGRMELVKEVF-GMDS--FKPDTCTFNTLMAAHCREGRIQDAKKVF 220

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM-------KSFDVKPNAVTYTAL 272
            +  E  +     SY+ + +          A  + D +       K     P    Y  +
Sbjct: 221 DQTMELRVRRDSASYSIVTRALCENGEFGRAEELVDSLLEKEVLKKRGGCVPLIAYYNPV 280

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPK-DNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
              LC+ GK  + + +  ++++  I  K D   F  L+   CK        +++ +M++ 
Sbjct: 281 FKYLCENGKAKKARLLFGQLLD--IRSKVDFLAFKTLILGHCKEEDFEQGYELVLSMLKR 338

Query: 332 SIPTEAGHYGILI 344
            +  ++  Y  +I
Sbjct: 339 DLMPDSECYIAVI 351



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 104/271 (38%), Gaps = 39/271 (14%)

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFF------RQLMKKGVL-DPVAFNNLIRGHSKEGNPD 431
           +A +YN M+  LC  G    A   F       Q  + G   + V +  +IR        D
Sbjct: 88  DAITYNSMLAALCRAGDLATARRLFDGMRVGEQGGEAGAFPNVVTYTTMIRACCARRLAD 147

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A  + K+M   GV  +   Y  +++ + + G     K        D   P +  F ++M
Sbjct: 148 EALSLFKMMLVEGVRPNRITYNTMMQGFCQAGRMELVKEVFGM---DSFKPDTCTFNTLM 204

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
            +   +GR+Q A +V    +E  V+ +    + +  AL   G      GR + ++     
Sbjct: 205 AAHCREGRIQDAKKVFDQTMELRVRRDSASYSIVTRALCENGE----FGRAEELV----- 255

Query: 552 PNFDSLLS--VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
              DSLL   VL ++G                C+  +A Y  V   L   GK   A  + 
Sbjct: 256 ---DSLLEKEVLKKRG---------------GCVPLIAYYNPVFKYLCENGKAKKARLLF 297

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            ++++     D+ +   LI G  +E + +Q 
Sbjct: 298 GQLLDIRSKVDFLAFKTLILGHCKEEDFEQG 328



 Score = 46.2 bits (108), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 96/259 (37%), Gaps = 46/259 (17%)

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLRE---MVERYIPPKDNSVFMKLLGVQCKSGHL 318
             P+  T   L+ GL  A        +LR    + E Y    D   +  +L   C++G L
Sbjct: 46  ASPDVATLNTLIHGLSTASPCPSAPALLRLFRFLPEAYAFAPDAITYNSMLAALCRAGDL 105

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A  +   M       EAG +  ++                                  
Sbjct: 106 ATARRLFDGMRVGEQGGEAGAFPNVV---------------------------------- 131

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
              +Y  MI+  C      +A   F+ ++ +GV  + + +N +++G  + G      E+V
Sbjct: 132 ---TYTTMIRACCARRLADEALSLFKMMLVEGVRPNRITYNTMMQGFCQAGR----MELV 184

Query: 438 K-IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           K + G      D   +  L+ ++ R+G   DAK   D  +E      S+ +  V  +L E
Sbjct: 185 KEVFGMDSFKPDTCTFNTLMAAHCREGRIQDAKKVFDQTMELRVRRDSASYSIVTRALCE 244

Query: 497 DGRVQTASRVMKSMVEKGV 515
           +G    A  ++ S++EK V
Sbjct: 245 NGEFGRAEELVDSLLEKEV 263


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/517 (22%), Positives = 231/517 (44%), Gaps = 45/517 (8%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+ L +   ++ A+ +   M  +GV+ D   +  LI  Y   G  +E V++ + M
Sbjct: 198 TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+E    +Y  L   + + GR   A+ +F+ M  +GI+P    Y ++L G+     L
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                F + M   G+S +   +N M   Y +   ++EA  +F +M+++ + P V+S+  +
Sbjct: 318 SEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGAL 377

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK---------------- 281
           I     + R DDA+  F++M +  V PN   +++L+ GLC  GK                
Sbjct: 378 IDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGI 437

Query: 282 -------------------MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
                              ++E Q+++  M+   + P   S +  L+   C +G ++ AA
Sbjct: 438 CVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVIS-YNTLVAGHCLTGRIDEAA 496

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +L  M+   +      Y IL+  +CKA   D A  L      +E++++  + +    ++
Sbjct: 497 KLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLF-----REMLMKGVTPV---VAT 548

Query: 383 YNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN ++  L   G+  +A E++   +  +   D   +N ++ G  K    D AF++ + + 
Sbjct: 549 YNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLC 608

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            +    D+  +  +I + L+ G   DA     ++   G  P    +R + E+L E+G + 
Sbjct: 609 SKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLG 668

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
               +  +M + G   N  ++  ++  LL RG +  A
Sbjct: 669 EFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 142/621 (22%), Positives = 266/621 (42%), Gaps = 36/621 (5%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI- 116
           T+  +I    R+G+L H       + K G + +  +   L++       V E+  I  + 
Sbjct: 92  TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M + G    V +Y+ +     R G+   A   F +M+ +GI P   TY  ++ G   +  
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           ++ A   F+ M  RG+  D  TYN +I+GY    K  E  ++  EM    +EP  I+Y  
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++       R  +A   FD M    +KP+   Y  LL G    G + E+   L  MV   
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P +  +F  +     K   +  A  +   M +  +  +   +G LI+  CK    D A
Sbjct: 332 VSP-NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDA 390

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           +   ++++ + +   P   +      ++ ++  LC  G+  KAE  F +++ +G+ +D V
Sbjct: 391 VLQFNQMINEGVT--PNIFV------FSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAV 442

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            FN L+     EG    A  ++ +M R GV  +  +Y  L+  +   G   +A   LD M
Sbjct: 443 FFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVM 502

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           + +G  P    +  ++    +  RV  A  + + M+ KGV   +     IL  L   G  
Sbjct: 503 VSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRF 562

Query: 536 EEALGRIDLMMQSGS---VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
            EA      M+ S +   +  ++ +L+ L +      A K+      +D  +D  ++  +
Sbjct: 563 SEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIM 622

Query: 593 LDALLAAGK---------TLNAYSILFKI----------MEKGGVTDWKSSDKLIAGLNQ 633
           + ALL  G+         T++AY ++  +          +E+G + ++   D L + + +
Sbjct: 623 IGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEF---DGLFSAMEK 679

Query: 634 EGNTKQADILSRMIRGEMSRG 654
            G    + +L+ ++R  + RG
Sbjct: 680 SGTAPNSHMLNALVRRLLHRG 700



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 213/448 (47%), Gaps = 20/448 (4%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L+     L  M   GV  +  +F ++  +Y KK +++E++ IF+ M+Q G+   V S+
Sbjct: 315 GALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSF 374

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            AL   + + GR   A   FN+M++EG+ P    ++ +++G     K E A   F ++  
Sbjct: 375 GALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLD 434

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +GI +D V +NT++       ++ EA++L   M    + P VISY T++ G+    R D+
Sbjct: 435 QGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDE 494

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP---KDNSVFM 306
           A ++ D M S  +KPN  TYT LL G C A ++ +   + REM+ + + P     N++  
Sbjct: 495 AAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILH 554

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L     ++G  + A ++   MI      +   Y I++   CK    D A K+  +L  K
Sbjct: 555 GLF----QTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK 610

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHS 425
           +    PQ    +++ ++N MI  L   G+   A   F  +   G++ D V +  +     
Sbjct: 611 D----PQ----LDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLI 662

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           +EG+      +   M + G   ++     L+   L +G+ + A   L  + E   S  +S
Sbjct: 663 EEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEAS 722

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEK 513
              S++ SL+  G  Q  +   KS+ EK
Sbjct: 723 T-TSMLISLYSRGEYQPHA---KSLPEK 746



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/571 (21%), Positives = 251/571 (43%), Gaps = 17/571 (2%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +LL M + G   D   +  +I  + ++G V+++  +F  M   G+  +V +Y  +   + 
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           +      AK  F +M+  G++P   TYN ++ G+  + K +  ++  E+M + G+  D +
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TY  +++   +  +  EA   F  M  K I+P V  Y  ++ GY       +     D M
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               V PN   +  +         + E   +  +M ++ + P D   F  L+   CK G 
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSP-DVVSFGALIDALCKLGR 386

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           ++ A      MI   +      +  L+   C    +++A +L  +++++ I +       
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICV------- 439

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
            +A  +N ++ +LC+ G+  +A+     +++ GV  + +++N L+ GH   G  D A ++
Sbjct: 440 -DAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKL 498

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           + +M   G+  +   Y  L+  Y +     DA +    M+  G +P  + + +++  LF+
Sbjct: 499 LDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQ 558

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM----QSGSVP 552
            GR   A+ +  +M+    K ++     IL  L     V+EA      +     Q  SV 
Sbjct: 559 TGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSV- 617

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F+ ++  L + G+   A+ L         + D+ +Y  + + L+  G +L  +  LF  
Sbjct: 618 TFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEG-SLGEFDGLFSA 676

Query: 613 MEKGGVT-DWKSSDKLIAGLNQEGNTKQADI 642
           MEK G   +    + L+  L   G+  +A +
Sbjct: 677 MEKSGTAPNSHMLNALVRRLLHRGDISRAGV 707



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/561 (23%), Positives = 256/561 (45%), Gaps = 22/561 (3%)

Query: 94  FEVLIESYGKKGIV--QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY--- 148
            E +I S  + G +   E++K+FD +       SV++++ L  ++ R G    ++R    
Sbjct: 15  LERVIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSL 74

Query: 149 FNKM---LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
           F +M    S  + P   TY++++  F    +LE     F  +   G  ++V+  + ++ G
Sbjct: 75  FTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKG 134

Query: 206 YNRFKKMDEA-EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
               K++DEA + L   M E    P V++Y T+I G+    + + A  +F EM    + P
Sbjct: 135 LCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPP 194

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N VTYT ++ GLC A  +   + V ++M++R + P DN  +  L+     +G       +
Sbjct: 195 NVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKP-DNGTYNCLIHGYLSTGKWKEVVQM 253

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L+ M    +  +   Y +L++  CK      A    D +  K I  +P      + + Y 
Sbjct: 254 LEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGI--KP------DVAIYA 305

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            ++      G   +   F   ++  GV  +   FN +   ++K+   + A  I   M ++
Sbjct: 306 ILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQ 365

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  D  ++  LI++  + G   DA    + MI +G +P   +F S++  L   G+ + A
Sbjct: 366 GLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKA 425

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             +   ++++G+  +      ++  L   G V EA   IDLM++ G  PN   +++L++ 
Sbjct: 426 EELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAG 485

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
               G+   A KLLD  +      +  +Y  +L     A +  +AYS+  +++ KG    
Sbjct: 486 HCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPV 545

Query: 621 WKSSDKLIAGLNQEGNTKQAD 641
             + + ++ GL Q G   +A+
Sbjct: 546 VATYNTILHGLFQTGRFSEAN 566



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 103/454 (22%), Positives = 197/454 (43%), Gaps = 31/454 (6%)

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA------DDALRIFDEMK---SFDV 262
           +DEA KLF E+       +V ++  ++     V RA      +  + +F  M    S  V
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLL---TVVSRAGCSSASERVVSLFTRMARECSSKV 86

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PNA TY+ L+   C  G++ E       ++ +     +  V  +LL   C +  ++ A 
Sbjct: 87  APNACTYSILIGCFCRMGRL-EHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEAT 145

Query: 323 DVLKAMIRLS---IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           D+L  ++R+S    P +   Y  +I  F +    ++A  L  +++++ I   P + +   
Sbjct: 146 DIL--LLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGI---PPNVV--- 197

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +Y  +I  LC      +A+  F+Q++ +GV  D   +N LI G+   G      ++++
Sbjct: 198 --TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLE 255

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G+  D   Y  L++   + G   +A+   DSM   G  P  +++  ++      G
Sbjct: 256 EMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKG 315

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
            +      +  MV  GV  N  +   +  A   +  +EEA+   + M Q G  P+   F 
Sbjct: 316 ALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFG 375

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +L+  L + G+   AV   +  +      ++  +  ++  L   GK   A  + F+++++
Sbjct: 376 ALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQ 435

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIR 648
           G   D    + L+  L  EG   +A  ++  MIR
Sbjct: 436 GICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIR 469


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/564 (24%), Positives = 243/564 (43%), Gaps = 50/564 (8%)

Query: 6    WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
            W    +  +  L+ + DH LV  V+         +QFFRW  +   + HD  T++ +I  
Sbjct: 1063 WGPDAEKALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIHC 1122

Query: 66   LGRVGKLNHARCILLDMPKKG--VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
            L  V +      ++ +M +    V    ++ +V +   G   +V++++ IF  +K    +
Sbjct: 1123 LEVVEQYGEMWKMIQEMVRNPICVVTPTELSDV-VRMLGNAKMVRQAITIFYQIKTRKCQ 1181

Query: 124  RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG--------------------------- 156
               ++Y+++  +++  G+Y    + +N+M +EG                           
Sbjct: 1182 PIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQ 1241

Query: 157  ---------IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
                     ++PT   Y +++  FF       A+  FE+M+ +    DV TY  +I G  
Sbjct: 1242 LLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLG 1301

Query: 208  RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
            +  ++DEA   F EM+ +   P  +    MI       R DDA+++F EM++    P+ V
Sbjct: 1302 KAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVV 1361

Query: 268  TYTALLPGLCDA-GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            TY  ++  L ++  +  EV      M E  I P   +  + + G  CK+  +  A  +L+
Sbjct: 1362 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGF-CKTNRMEKAMMLLE 1420

Query: 327  AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
             M     P     Y  LI+   KA+ YD A +L  +L E        +     A  Y  M
Sbjct: 1421 EMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE--------NCGSSSARVYAVM 1472

Query: 387  IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
            I+HL   G+   A   F ++ K G   D  A+N L+ G ++ G  D A   ++ M   G 
Sbjct: 1473 IKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGC 1532

Query: 446  PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
              D ++Y  ++    + G P  A   L +M +    P    + +V+ +L   G  + AS+
Sbjct: 1533 IPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASK 1592

Query: 506  VMKSMVEKGVKENLDLVAKILEAL 529
            +MK M   G + +L   + ILEA+
Sbjct: 1593 LMKEMNTLGFEYDLITYSSILEAI 1616



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 205/465 (44%), Gaps = 20/465 (4%)

Query: 1    MAERAWTTRLQNKIRALVP--QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRET 58
            M  +A T   Q K R   P  Q  ++++  ++H  +  E   Q +  +   G    D  T
Sbjct: 1164 MVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQY-EKVHQLYNEMSTEGHCFPDTVT 1222

Query: 59   HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
            +  +I    ++G+ + A  +L +M + G+Q    ++ +LI  + K      ++ +F+ M+
Sbjct: 1223 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 1282

Query: 119  QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
                   V +Y  L + + + GR   A  +F +M  EG  P     N M+     + +L+
Sbjct: 1283 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 1342

Query: 179  TAIRFFEDMKSRGISLDVVTYNTMING-YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A++ F++M++      VVTYNT+I   +    +  E    F  MKE  I P+  +Y+ +
Sbjct: 1343 DAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 1402

Query: 238  IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-- 295
            I G+    R + A+ + +EM      P    Y +L+  L  A +     ++ +E+ E   
Sbjct: 1403 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 1462

Query: 296  YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
                +  +V +K LG   K+G L+ A ++   M +L    +   Y  L+    +  M D 
Sbjct: 1463 SSSARVYAVMIKHLG---KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDE 1519

Query: 356  AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP- 414
            A+  + ++ E   I         + +SYN ++  L   G   +A       MK+  + P 
Sbjct: 1520 ALSTMRRMQEHGCI--------PDINSYNIILNGLAKTGGPHRAMEMLSN-MKQSTVRPD 1570

Query: 415  -VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
             V++N ++   S  G  + A +++K M   G   D   Y  ++E+
Sbjct: 1571 VVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEA 1615



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 115/509 (22%), Positives = 217/509 (42%), Gaps = 58/509 (11%)

Query: 181  IRFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI---EPTVISYTT 236
            ++FF    K R    D  TY  +I+     ++  E  K+  EM    I    PT +S   
Sbjct: 1097 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVV 1156

Query: 237  MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VER 295
             + G   + R   A+ IF ++K+   +P A  Y +++  L   G+  +V ++  EM  E 
Sbjct: 1157 RMLGNAKMVR--QAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 1214

Query: 296  YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            +  P D   +  L+   CK G  ++A  +L  M  + +      Y +LI  F K      
Sbjct: 1215 HCFP-DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHG 1273

Query: 356  AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
            A+ L +++  +    RP      +  +Y  +I+ L   G+  +A  FF ++ ++G   D 
Sbjct: 1274 ALSLFEEM--RHQYCRP------DVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDT 1325

Query: 415  VAFNNLIRGHSKEGNPDSAFEIVKIMGR-RGVPRDADAYICLIES-YLRKGEPADAKTAL 472
            V  NN+I    K G  D A ++ + M   R +P     Y  +I++ +  K   ++  +  
Sbjct: 1326 VFMNNMINFLGKAGRLDDAMKLFQEMETLRCIP-SVVTYNTIIKALFESKSRASEVPSWF 1384

Query: 473  DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG------------------ 514
            + M E G SP+S  +  +++   +  R++ A  +++ M EKG                  
Sbjct: 1385 ERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 1444

Query: 515  ------------VKENLDLVAKILEALLMR-----GHVEEALGRIDLMMQSGSVPN---F 554
                        +KEN    +  + A++++     G +++A+   D M + G  P+   +
Sbjct: 1445 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 1504

Query: 555  DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            ++L+S L+  G    A+  +       CI D+ SY  +L+ L   G    A  +L  + +
Sbjct: 1505 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 1564

Query: 615  KGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
                 D  S + ++  L+  G  ++A  L
Sbjct: 1565 STVRPDVVSYNTVLGALSHAGMFEEASKL 1593


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 15/419 (3%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E  V SY+A+       G+   A+R    M    +EP  +TYN ++ G     + + A+
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNAL 172

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              +DM  RG   DVVTY  ++    +     +A KL  EM++K   P +++Y  ++ G 
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R DDA+     + S+  +PN V+Y  +L GLC A +  + +K++ EM  +  PP +
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPP-N 291

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  L+   C+ G +  A ++L  + +      +  Y  ++  FCK +  DRA+  ++
Sbjct: 292 VVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 351

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNN 419
            +V         S    +  SYN ++  LC  G+   A     QL  KG   PV  ++N 
Sbjct: 352 LMV--------SSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC-TPVLISYNT 402

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +I G +K G  + A E++  M  +G+  D   Y  +     R+G   +A  A   + + G
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
             P + L+ +++  L +     +A  +   MV  G   N      ++E L   G V+EA
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEA 521



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 191/420 (45%), Gaps = 10/420 (2%)

Query: 27  YNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG 86
           YN +         L   R +  A     D  T+  +I  L   G+ ++A  +L DM ++G
Sbjct: 123 YNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG 182

Query: 87  VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
              D   + +L+E+  K+   +++VK+ D M+  G    + +Y+ +   I + GR   A 
Sbjct: 183 CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAM 242

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
            +   + S G EP   +YN++L G   + + E A +   +M  +G   +VVT+N +I+  
Sbjct: 243 EFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            R   ++ A ++  ++ +    P  +SY  ++  +   ++ D A+   + M S    P+ 
Sbjct: 303 CRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDI 362

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           V+Y  LL  LC  G++    ++L ++ ++   P   S    + G+  K+G    A ++L 
Sbjct: 363 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT-KAGKTEEALELLN 421

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+   +  +   Y  +    C+    + AIK   K+  +++ +RP + L      YN +
Sbjct: 422 EMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKV--QDMGIRPNTVL------YNAI 473

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           +  LC    T  A   F  ++  G + +   +  LI G + EG    A E++  +  RGV
Sbjct: 474 LLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 149/302 (49%), Gaps = 5/302 (1%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+++ A   L  +P  G + +   + ++++        +++ K+   M + G   +V ++
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L   + RRG    A    +++   G  P   +YN +L  F    K++ A+ F E M S
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 355

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G   D+V+YNT++    R  ++D A +L  ++K+K   P +ISY T+I G     + ++
Sbjct: 356 SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEE 415

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-- 307
           AL + +EM +  ++P+ +TY+ +  GLC  G++ E  K   ++ +  I P  N+V     
Sbjct: 416 ALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRP--NTVLYNAI 473

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           LLG+ CK    ++A D+   M+          Y ILIE      +   A +++ +L  + 
Sbjct: 474 LLGL-CKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRG 532

Query: 368 II 369
           ++
Sbjct: 533 VV 534



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 180/406 (44%), Gaps = 26/406 (6%)

Query: 242 VAVERAD--DALRIFDEMKSFDVKPNAV-TYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           V V R D  +A+R+ + M   +  P+A     AL+  LC +G+  E ++VL         
Sbjct: 65  VLVRRGDLEEAIRLVESMAGLE--PSAAGPCAALIKKLCASGRTAEARRVLASC------ 116

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
             D   +  ++   C +G L+ A  ++ AM    +  +   Y  LI   C     D A+ 
Sbjct: 117 EPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALA 173

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
           +LD ++ +  +         +  +Y  +++  C      +A     ++  KG   D V +
Sbjct: 174 VLDDMLRRGCV--------PDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTY 225

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N ++ G  +EG  D A E +K +   G   +  +Y  +++         DA+  +  M  
Sbjct: 226 NVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSR 285

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G  P    F  ++  L   G V+ A  ++  + + G   N      IL A   +  ++ 
Sbjct: 286 KGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 345

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A+  ++LM+ SG  P+   +++LL+ L   G+  AAV+LL     + C   L SY  V+D
Sbjct: 346 AMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 405

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            L  AGKT  A  +L +++ KG   D  +   + +GL +EG  ++A
Sbjct: 406 GLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEA 451



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 129/273 (47%), Gaps = 1/273 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+V   L  A+  E A +    + R G    +  T   +I  L R G +  A  IL  +
Sbjct: 260 YNIVLKGLCTAERWEDAEKLMAEMSRKG-RPPNVVTFNMLISFLCRRGLVEPAMEILDQI 318

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           PK G   +   +  ++ ++ K+  +  ++   ++M   G    + SY+ L   + R G  
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEV 378

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A    +++  +G  P   +YN ++ G   + K E A+    +M ++G+  D++TY+T+
Sbjct: 379 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI 438

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            +G  R  +++EA K F ++++  I P  + Y  ++ G         A+ +F  M S   
Sbjct: 439 SSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGC 498

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            PN  TYT L+ GL   G + E ++++ E+  R
Sbjct: 499 MPNESTYTILIEGLAYEGLVKEAREMMAELCSR 531


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 154/698 (22%), Positives = 292/698 (41%), Gaps = 90/698 (12%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N +   L    +  HA ++   + R+G +  D  T   +I    R  +L+ A+ +   M
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSG-WRPDAFTFNSLILGYCRTQQLDVAQDLFDKM 190

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIF---------------------------- 114
           P +G   D   +  LIE + + G V E++++F                            
Sbjct: 191 PLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGL 250

Query: 115 ---DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
                MK+LG   + ++Y AL  L  R  +   A++  N+M   G+ P   T   ++  +
Sbjct: 251 YMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAY 310

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               ++  A+R FE MK +G   +V TYN M+ G+    K+ +A  L  +M+E  +EP V
Sbjct: 311 CREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDV 370

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++Y  +I+G       + A R+   M+   +  +  TY  L+  LC  GK+ E   +   
Sbjct: 371 VTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 292 MVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           +  R I P  NSV F  ++   CK G  + A   L+ M+      +   Y   IEN CK 
Sbjct: 431 LEYRGIRP--NSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKT 488

Query: 351 EMYDRAIKLLDKLVEKEIILRPQST-----------------------------LDMEAS 381
           +     +  +D++++K++  +P +                                 +  
Sbjct: 489 KGSREGLSFIDEMLQKDV--KPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVV 546

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y   ++  C+ G+  +AE    ++ K G++ D +A+N LI GH+  G  D A  I+K M
Sbjct: 547 TYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM 606

Query: 441 -GRRGVPRDADAYICL---------------IESYLRKGEPADAKTALDSMIEDGHSPAS 484
            G   +P     +I L                 S  +  E AD     + M ++    ++
Sbjct: 607 TGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSA 666

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             + +++E   E+ R+   + ++  M E  +  N D+   ++          +A   +  
Sbjct: 667 RAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCS 726

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M+  G +PN   +  LLS  + +G+   A ++      ++   D   ++ ++D L+  G 
Sbjct: 727 MIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGH 786

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
               + ++  I+E+      K SD+  A L +E +T++
Sbjct: 787 PDMCHDMI-SILEQ---MKCKPSDETYAMLTEELSTRE 820



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/513 (23%), Positives = 228/513 (44%), Gaps = 37/513 (7%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSV-KSYDALFKLILRRGRYMMAKRYFNKM 152
           F  L+  + +  +    +++F  M   G       +Y+AL + + RR     A+RY + M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G  P   T+N ++ G+  + +L+ A   F+ M  RG S D V+Y  +I G+    ++
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRV 215

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           DEA +LF E++    +P + ++  ++KG     R ++ L +  +MK    +P    Y AL
Sbjct: 216 DEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAAL 271

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +   C   K  E +K+L EM +  + P   +    ++   C+ G ++ A  V ++M    
Sbjct: 272 VDLWCREQKAEEAEKMLNEMFDNGLVPCAVTC-TAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKL----VEKEII-----LRPQST-------- 375
                  Y  +++ FC      +A+ LLD++    VE +++     +R Q          
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390

Query: 376 ----------LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
                     L  +  +YN +I  LC  G+  +A   F  L  +G+  + V FN +I G 
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K G  D A   ++ M   G   D   Y   IE+  +     +  + +D M++    P++
Sbjct: 451 CKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPST 510

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             +  V++ LF++     A+R+   MV  G   ++      + A    G + EA   +  
Sbjct: 511 VNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVME 570

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           M + G + +   +++L+   +  GKT  AV +L
Sbjct: 571 MKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTIL 603


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 228/518 (44%), Gaps = 50/518 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+ S + L + +L  GR+   +  F  +++ G  P    +N  +     +  L+ A+   
Sbjct: 122 SLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAML 181

Query: 185 EDM-KSRGISL-DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
             M +S G    D  +YN +I G  R  K  +A K+F EM ++ + P  I+Y TMI G+V
Sbjct: 182 RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHV 241

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK-- 300
                +   R+ D+M     KPN VTY  LL GLC AG+M E + ++ EM    + P   
Sbjct: 242 KGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGF 301

Query: 301 -------------DNSVFMKLLGVQ-------------------CKSGHLNAAADVLKAM 328
                        D+   + L G                     CK G +  A  VL+ +
Sbjct: 302 TYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEML 361

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +   +      Y  LI  +C+      A  + +++  + I  RP         +YN +I 
Sbjct: 362 VHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHI--RPDHI------TYNALIN 413

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
            LC      +AE    ++ K GV DP    FN LI  + + G  +  F ++  M  +G+ 
Sbjct: 414 GLCKMEMITEAEDLVMEMEKSGV-DPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIK 472

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            +  ++  +++++ + G+  +A   LD MI     P + ++ S++++  E G  + A  +
Sbjct: 473 SNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLL 532

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           ++ M   GV  ++     +L+ L     ++EA   I  +   G  P+   +++++S    
Sbjct: 533 VEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCN 592

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           KG T  A++LL      D    L +Y  +L AL +AG+
Sbjct: 593 KGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGR 630



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/500 (24%), Positives = 229/500 (45%), Gaps = 11/500 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERA-GLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           F  N        A + + AL   R + R+ G    D  ++  +I  L R GK + A  + 
Sbjct: 159 FAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVF 218

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M  +GV  ++  +  +I+ + K G ++   ++ D M Q G + +V +Y+ L   + R 
Sbjct: 219 DEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRA 278

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           GR    +   ++M S  + P   TY+++  G   +    T +  F +   +G+ +   T 
Sbjct: 279 GRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTC 338

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + ++NG  +  K+ +AE++   +    + PT   Y T+I GY  V     A  IF++MKS
Sbjct: 339 SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKS 398

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             ++P+ +TY AL+ GLC    + E + ++ EM +  + P   + F  L+    ++G L 
Sbjct: 399 RHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVET-FNTLIDAYGRAGQLE 457

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
               VL  M    I +    +G +++ FCK      A+ +LD ++ K+++   Q      
Sbjct: 458 KCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQ------ 511

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVK 438
              YN +I     +G T +A +   ++   GV   +  +N L++G  K    D A E++ 
Sbjct: 512 --VYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIY 569

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            +  +G+  D  +Y  +I +   KG+   A   L  M +    P    +  ++ +L   G
Sbjct: 570 NLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAG 629

Query: 499 RVQTASRVMKSMVEKGVKEN 518
           RV     + + MV K V+ +
Sbjct: 630 RVHDMECLYQHMVHKNVEPS 649



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 133/261 (50%), Gaps = 5/261 (1%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L ++  +  A  ++++M K GV    + F  LI++YG+ G +++   + 
Sbjct: 404 DHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVL 463

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+  G++ +V S+ ++ K   + G+   A    + M+ + + P    YN ++  +  S
Sbjct: 464 SDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIES 523

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              E A    E MKS G+S  + TYN ++ G  +  ++DEAE+L   +  + + P V+SY
Sbjct: 524 GGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSY 583

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I         D AL +  EM  +D++P   TY  LL  L  AG++ +++ + + MV 
Sbjct: 584 NTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVH 643

Query: 295 RYIPPKDNSVFMKLLGVQCKS 315
           + + P  +     + G +C++
Sbjct: 644 KNVEPSSS-----IYGTRCEN 659



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 108/272 (39%), Gaps = 39/272 (14%)

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           SS N +++ L   G+       F  L+  G   D  A+N  ++     G+ D A  +++ 
Sbjct: 124 SSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRR 183

Query: 440 MGR-RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
           MGR  G P                  P DA +                +  V+  L+  G
Sbjct: 184 MGRSEGAP------------------PPDAFS----------------YNVVIAGLWRSG 209

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           +   A +V   MV++GV  N      +++  +  G +E      D M+Q G  PN   ++
Sbjct: 210 KGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYN 269

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            LLS L   G+      L+D       + D  +Y  + D L   G +    S+  + ++K
Sbjct: 270 VLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKK 329

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           G +    +   L+ GL ++G   +A+ +  M+
Sbjct: 330 GVIIGAYTCSILLNGLCKDGKVAKAEQVLEML 361


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/574 (23%), Positives = 250/574 (43%), Gaps = 69/574 (12%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           ++++ W+  L+  +R   P      +  +L+   +SE  L+FF+W ++    ++  E   
Sbjct: 27  LSKQHWS-ELKPHLRVTKPA---TFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPTS 82

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKG--------IVQESVK 112
           K++  L    + +  R  L    K        +F  L+   G+ G        +V   VK
Sbjct: 83  KVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVK 142

Query: 113 ---------IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT 163
                     F   K  G + S+ S + L   +++  +    +  + +M+   I    +T
Sbjct: 143 NLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNT 202

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR---FKKMDEAEKLFA 220
           +N+ + G   + KL  A    EDMK+ GIS +VVTYNT+++GY +     KM +AE    
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           EM    I P  +++ T+I G+   E    A + F+EM+   +KPN VTY +L+ GLC+ G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           K+ E                                    A D+   M+ L +      Y
Sbjct: 323 KLEE------------------------------------AIDLWDKMVGLGLKPNIVTY 346

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             LI  FCK +M   A K+ D + ++E++  P         ++N MI   C  G   +  
Sbjct: 347 NALINGFCKKKMMKEATKVFDDVSKQELV--PN------VITFNTMIDAYCKEGMMEEGF 398

Query: 401 IFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
                ++ +G+L  V+ +N LI G  ++ +  +A E++  M  +G+  D   Y  LI+  
Sbjct: 399 SLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            +  +  +A+  L+ M   G  P    + ++M+    +G+++ A  V   M ++  + N+
Sbjct: 459 CKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNV 518

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
                +++       +E A G ++ M++ G  PN
Sbjct: 519 VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPN 552



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 166/333 (49%), Gaps = 9/333 (2%)

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
           G  GK+  A   + +M    +  +E  F  LI+ + K   V  + K F+ M++ G++ ++
Sbjct: 249 GSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNI 308

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
            +Y++L   +   G+   A   ++KM+  G++P   TYN ++ GF     ++ A + F+D
Sbjct: 309 VTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDD 368

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           +  + +  +V+T+NTMI+ Y +   M+E   L + M ++ I P V +Y  +I G    + 
Sbjct: 369 VSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQD 428

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
              A  + +EM++  +K + VTY  L+ GLC   K    +K+L EM    + P ++  + 
Sbjct: 429 LQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKP-NHVTYN 487

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+   C  G L AA +V   M +         Y +LI+ +CK    + A  LL++++EK
Sbjct: 488 TLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEK 547

Query: 367 EIILRPQST------LDMEASSYNPMIQHLCHN 393
              L P  T      L+M    ++P I+   +N
Sbjct: 548 G--LNPNRTTYDIVRLEMLEKGFSPDIEGHLYN 578



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 208/473 (43%), Gaps = 18/473 (3%)

Query: 149 FNKMLSEGIEP--TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
           F+ +L +G  P  T    ++++  +  +L+L  A   F   K  G  L + + N +++  
Sbjct: 116 FHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSAL 175

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +  K+ + E ++ EM ++ I   + ++   I G     + + A    ++MK++ + PN 
Sbjct: 176 VKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNV 235

Query: 267 VTYTALLPGLC---DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           VTY  L+ G C    AGKM + +  ++EM+   I P +   F  L+   CK  ++ AA  
Sbjct: 236 VTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNE-VTFNTLIDGFCKDENVAAAKK 294

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
             + M +  +      Y  LI   C     + AI L DK+V   + L+P         +Y
Sbjct: 295 AFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVG--LGLKPNIV------TY 346

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I   C      +A   F  + K+ ++ + + FN +I  + KEG  +  F +   M  
Sbjct: 347 NALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLD 406

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G+  +   Y CLI    RK +   AK  L+ M   G       +  +++ L ++ + + 
Sbjct: 407 EGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRN 466

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A +++  M   G+K N      +++   M G ++ AL     M +    PN   ++ L+ 
Sbjct: 467 AEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIK 526

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
              +  K  AA  LL+  L +    +  +Y+ V   +L  G + +    L+ I
Sbjct: 527 GYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDIEGHLYNI 579



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 135/277 (48%), Gaps = 8/277 (2%)

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
           +  +S NP++  L    + G  E  +++++K+ +   +  FN  I G  + G  + A + 
Sbjct: 163 LSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDA 222

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPAD---AKTALDSMIEDGHSPASSLFRSVMES 493
           ++ M   G+  +   Y  L++ Y ++G       A+  +  M+ +   P    F ++++ 
Sbjct: 223 IEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDG 282

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             +D  V  A +  + M ++G+K N+     ++  L   G +EEA+   D M+  G  PN
Sbjct: 283 FCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPN 342

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              +++L++   +K     A K+ D    ++ + ++ ++  ++DA    G     +S+  
Sbjct: 343 IVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCS 402

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
            ++++G + +  + + LIAGL ++ + + A ++L+ M
Sbjct: 403 SMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEM 439



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 86/173 (49%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI+   + G +     +   M  +G+  +   +  LI    +K  +Q + ++ + M+  G
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++  V +Y+ L   + +  +   A++  N+M + G++P   TYN ++ G+ +  KL+ A+
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
                M+      +VVTYN +I GY +  K++ A  L  EM EK + P   +Y
Sbjct: 504 NVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 209/445 (46%), Gaps = 14/445 (3%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L+     L  M   GV  D  +F ++  +Y KK ++ E++ IFD M+Q  +  ++ +Y
Sbjct: 321 GSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTY 380

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            AL   + + GR   A   FN+M+ EG+ P    ++ +++G     K E A   F ++  
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLD 440

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +GI LD V +NT++    R  ++ EA++L   M    + P VISY T++ G+    R D+
Sbjct: 441 QGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDE 500

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A ++ D + S  +KP+ VTY  LL G C A ++ +   + REM+ + + P D   +  +L
Sbjct: 501 AAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP-DVVTYNTIL 559

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
               ++G  + A ++  +MI          Y I+I   CK    D A K+   L  K+  
Sbjct: 560 HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKD-- 617

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGH-SKEG 428
                 L ++  + N MI  L   G+   A   F  +   G++  V    LI  +  KEG
Sbjct: 618 ------LQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEG 671

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           + +   E+   M   G   ++     L+   L +G+   A   L  + E   S  +S   
Sbjct: 672 SLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEAST-T 730

Query: 489 SVMESLFEDGRVQTASRVMKSMVEK 513
           S++ S++  G  Q   ++ KS+ EK
Sbjct: 731 SMLISIYSRGEYQ---QLAKSLPEK 752



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/556 (22%), Positives = 238/556 (42%), Gaps = 47/556 (8%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE--THLKMIEILGRVGKLNHARCI 78
           F ++++       K +E AL+    +   G  +H     T+  +I+ L +   ++ A+ +
Sbjct: 165 FSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGV 224

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
              M  KGV+ +   +  LI  Y   G  +E V++   M   G++     Y  L   + +
Sbjct: 225 FQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCK 284

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            GR   A+  F+ ++ +GI+P    Y ++L G+     L     F + M   G+S D   
Sbjct: 285 NGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHI 344

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           +N M   Y +   +DEA  +F +M+++ + P +++Y  +I     + R DDA+  F++M 
Sbjct: 345 FNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMI 404

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
              + P+   +++L+ GLC   K  + +++  E++++ I   D   F  L+   C+ G +
Sbjct: 405 DEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGI-RLDTVFFNTLMCNLCREGRV 463

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A  ++  M+R+ +  +   Y  L++  C     D A KLLD +V   I L+P      
Sbjct: 464 MEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV--SIGLKPDKV--- 518

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV----------------------- 415
              +YN ++   C   +   A   FR+++ KG+   V                       
Sbjct: 519 ---TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELY 575

Query: 416 -------------AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
                         +N +I G  K    D AF++   +  + +  D      +I + L+ 
Sbjct: 576 LSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKG 635

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G   DA     ++   G  P    +  + E+L ++G ++    +  +M E G   N  ++
Sbjct: 636 GRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRML 695

Query: 523 AKILEALLMRGHVEEA 538
             ++  LL RG +  A
Sbjct: 696 NALVRWLLHRGDINRA 711



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/550 (23%), Positives = 248/550 (45%), Gaps = 26/550 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY----FNKMLSEG---IEP 159
           + +++K+FD M       SV++++ L   +  R R   A       FN+M+ E    + P
Sbjct: 32  LNDALKLFDEMLTHARPASVRAFNQLLTAV-SRARCSSASELVVSLFNRMIRECSIKVAP 90

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL-DVVTYNTMINGYNRFKKMDEA-EK 217
           +  TY +++  F    +L+     F  +   G  + D V ++ ++ G    K++DEA + 
Sbjct: 91  SSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDI 150

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK---SFDVKPNAVTYTALLP 274
           L   M E    P V SY+ ++KG+   +RA++AL +   M         PN VTYT ++ 
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GLC A  +   + V + M+++ + P +N  +  L+      G       +L+ M    + 
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRP-NNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQ 269

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   Y +L++  CK      A  + D ++ K I  +P  T+      Y  ++      G
Sbjct: 270 PDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGI--KPNVTI------YGILLHGYATEG 321

Query: 395 QTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
              +   F   ++  GV  D   FN +   ++K+   D A  I   M ++ +  +   Y 
Sbjct: 322 SLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYG 381

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI++  + G   DA    + MI++G +P   +F S++  L    + + A  +   ++++
Sbjct: 382 ALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQ 441

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G++ +      ++  L   G V EA   IDLM++ G  P+   +++L+      G+   A
Sbjct: 442 GIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEA 501

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            KLLD  +      D  +Y  +L     A +  +AYS+  +++ KG   D  + + ++ G
Sbjct: 502 AKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 561

Query: 631 LNQEGNTKQA 640
           L Q G   +A
Sbjct: 562 LFQTGRFSEA 571



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 139/595 (23%), Positives = 251/595 (42%), Gaps = 22/595 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQW---DEDMFEVLIESYGKKGIVQESVKIF 114
           T+  +I    R+G+L H       + K G  W   D  +F  L++       V E+  I 
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLILKTG--WRVNDTVIFSQLLKGLCDAKRVDEATDIL 151

Query: 115 -DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTYNVMLWG 170
              M + G    V SY  L K      R   A    + M  +G     P   TY  ++ G
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
              +  ++ A   F+ M  +G+  +  TY  +I+GY    K  E  ++  EM    ++P 
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
              Y  ++       R  +A  IFD +    +KPN   Y  LL G    G + E+   L 
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            MV   + P D+ +F  +     K   ++ A  +   M +  +      YG LI+  CK 
Sbjct: 332 LMVGNGVSP-DHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKL 390

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
              D A+   ++++++ +      T D+    ++ ++  LC   +  KAE  F +++ +G
Sbjct: 391 GRVDDAVLKFNQMIDEGM------TPDIFV--FSSLVYGLCTVDKWEKAEELFFEVLDQG 442

Query: 411 V-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           + LD V FN L+    +EG    A  ++ +M R GV  D  +Y  L++ +   G   +A 
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
             LD ++  G  P    + +++    +  R+  A  + + M+ KG+  ++     IL  L
Sbjct: 503 KLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGL 562

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
              G   EA      M+ S +  N   ++ +++ L +      A K+      +D  +D+
Sbjct: 563 FQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDI 622

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
            +   ++ ALL  G+  +A  +   I   G V D ++   +   L +EG+ ++ D
Sbjct: 623 FTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELD 677


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/569 (23%), Positives = 251/569 (44%), Gaps = 35/569 (6%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           +A++ W+ +L+  ++   P    +L+ ++ +     +  L +F+W ++     H+ E   
Sbjct: 56  IAKQHWS-KLKTIVKETNPS---SLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFC 111

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +++ +L      N  R +L    K     +  +F  L                  ++   
Sbjct: 112 RLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL-----------------SVLGSW 154

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G   S+   D L    ++ G   +A   F++    G   +  + N ML       ++   
Sbjct: 155 GCANSI-IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
              +++M  R I ++VVT++ +ING  +  K  +A  +  +MK     P+VI+Y T+I G
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y    +   A  +  EM +  + PN +T+  L+ G C    +   +KV  EM  + + P 
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP- 332

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   +  L+   C +G L+ A  +   M  + +      Y  LI  FCK +M   A ++L
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNN 419
           D + ++   L P         ++N +I      G+   A +    ++  GV   V+ +N 
Sbjct: 393 DDIGKRG--LAPN------VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  +EGN   A ++ K M   G+  D   Y  L+++  +KGE   A   LD M E G
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            +P+   + ++++  F +G    A  V   M +KG + N+     +++    +G +EEA 
Sbjct: 505 LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 564

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKG 565
             ++ M++ G +PN   +D L   + EKG
Sbjct: 565 RLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 171/409 (41%), Gaps = 50/409 (12%)

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++  YV     D AL  FD    +  + +A++   +L  L   G++  V+ V +EM+ R 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I   +   F  ++   CK G    A DV++ M           Y  +I+ +CKA    +A
Sbjct: 225 IGV-NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
             LL ++V K I   P         ++N +I   C +     A+  F ++ ++G L P  
Sbjct: 284 DALLKEMVAKRI--HPNEI------TFNILIDGFCRDENVTAAKKVFEEMQRQG-LQPNV 334

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +N+LI G    G  D A  +   M   G+  +   Y  LI  + +K    +A+  LD 
Sbjct: 335 VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD 394

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           + + G +P    F +++++  + GR+                          +A L+R  
Sbjct: 395 IGKRGLAPNVITFNTLIDAYGKAGRMD-------------------------DAFLLR-- 427

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
                    +M+ +G  PN   ++ L+     +G    A KL     G     DL +Y  
Sbjct: 428 --------SMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++DAL   G+T  A  +L ++ E G      + + LI G  +EGN+  A
Sbjct: 480 LVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAA 528



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 133/277 (48%), Gaps = 4/277 (1%)

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
           + A S NPM+  L   G+ G  E  +++++++ + ++ V F+ +I G  K G    A ++
Sbjct: 192 LSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV 251

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           V+ M   G       Y  +I+ Y + G+   A   L  M+     P    F  +++    
Sbjct: 252 VEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCR 311

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
           D  V  A +V + M  +G++ N+     ++  L   G ++EALG  D M   G  PN   
Sbjct: 312 DENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVT 371

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +++L++   +K     A ++LD    R    ++ ++  ++DA   AG+  +A+ +   ++
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           + G   +  + + LI G  +EGN K+A  L++ + G 
Sbjct: 432 DTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 198/424 (46%), Gaps = 15/424 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G   +   + VLI    K+G   +++K+FD M   G+  +VK++  L   +   G+
Sbjct: 202 MVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQ 261

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG-ISLDVVTYN 200
              A+   + M  +G  P   TYN  L G   + +++ AI   E ++  G   L +  Y+
Sbjct: 262 LKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYS 321

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEK-NIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            +I+G     + +E  + + E+ E+ ++ P ++ YT MI+G     R +DA   FDEMK 
Sbjct: 322 CLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKE 381

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               P+   Y  LL  LCDAG +   + ++ EMV   +    ++    ++G+ CK   ++
Sbjct: 382 KGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGL-CKEQLVD 440

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM- 378
            A  V   M+ +        Y +LI+   +A   + A  L  K+   E+   P   L + 
Sbjct: 441 EAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM---EVGNNPSLFLRLT 497

Query: 379 -------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNP 430
                  ++ +   +++ +C +GQ  KA    R ++  GV+ D V +N L+ G  K  N 
Sbjct: 498 LGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNL 557

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D A  + + +  +G P D   Y  LI+S LR     DA T    ++  G +P+  ++ S+
Sbjct: 558 DGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSM 617

Query: 491 MESL 494
           M SL
Sbjct: 618 MRSL 621



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 120/543 (22%), Positives = 228/543 (41%), Gaps = 32/543 (5%)

Query: 26  VYNVL-HGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            YNVL HG         AL+ F  +   G+   + +TH  ++  +   G+L  A  +L  
Sbjct: 213 TYNVLIHGLCKRGTPVDALKLFDEMISRGI-TPNVKTHTILLSSMCNAGQLKEAENLLHS 271

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV-ERSVKSYDALFKLILRRG 140
           M  KG   DE  +   +    K G V E+++  + ++  G     +K Y  L   +   G
Sbjct: 272 MEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAG 331

Query: 141 RYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           RY    + + ++L +  + P    Y +M+ G   + +   A  FF++MK +G + D   Y
Sbjct: 332 RYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCY 391

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT++        +D A  L +EM   N+   + +YTTMI G    +  D+A+++FD M  
Sbjct: 392 NTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVE 451

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP------------KDNSVFMK 307
               P+ +TY  L+ GL  A ++ E + +  +M     P             +D+    K
Sbjct: 452 VGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQK 511

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   C+SG +  A  +L+ +I   +  +   Y  L+   CK    D A++L  +L  K 
Sbjct: 512 LVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK- 570

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSK 426
                     ++  +Y  +I  L    +   A   F+ ++  G    +  +N+++R   +
Sbjct: 571 -------GFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCR 623

Query: 427 EGNPDSAFEI-VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
                 A  +    + R+      D  I        +G   +A   L  + ++  S  S 
Sbjct: 624 MQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSC 683

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            +   +  L + GR++ A ++   + E G+         + + L + G++  A   +D+M
Sbjct: 684 PYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAA---VDVM 740

Query: 546 MQS 548
           + +
Sbjct: 741 LYT 743



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 123/540 (22%), Positives = 227/540 (42%), Gaps = 63/540 (11%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSL-KLE 178
           G++    +++AL       GR+  A   F++M  E G  PT   YN +L     S   + 
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+  +  M + G   +  TYN +I+G  +     +A KLF EM  + I P V ++T ++
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
                  +  +A  +   M+     P+ VTY A L GLC AG++        E +ER   
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRV-------DEAIERLEA 306

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
            +    F+  LG++                           Y  LI+    A  Y+   +
Sbjct: 307 LRHTGTFV--LGLK--------------------------GYSCLIDGLFLAGRYEEGFQ 338

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
              +++E       Q+ +  +   Y  MI+     G+T  A  FF ++ +KG   D   +
Sbjct: 339 CYMEVLE-------QADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCY 391

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N L++     G+ D A  ++  M R  V  D   Y  +I    ++    +A    D M+E
Sbjct: 392 NTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVE 451

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL--------------VA 523
            G  P+   +  +++ L+   R++ A R++   +E G   +L L              + 
Sbjct: 452 VGCHPSVMTYNVLIDGLYRAHRLEEA-RMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQ 510

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
           K++E++   G V +A   +  ++ SG VP+   +++LL+ L +      A++L      +
Sbjct: 511 KLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK 570

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              +D  +Y  ++D+LL A +  +A ++   I+  GG       + ++  L +     QA
Sbjct: 571 GFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQA 630


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/510 (24%), Positives = 237/510 (46%), Gaps = 11/510 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERA-GLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           F  N V      A + + AL   R + R+ G    D  ++  +I  L R GK + A  + 
Sbjct: 158 FAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVF 217

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M   GV  +   +  +I+ + K G ++   ++ D M   G + +V +Y+ L   + R 
Sbjct: 218 DEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRT 277

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           GR    +   ++M S  + P   TY+++  G   + + +T +  F +   +G+ L   T 
Sbjct: 278 GRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTC 337

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + ++NG  +  K+ +A+++F  +    + PT + Y T+I GY  V     A  IF++MKS
Sbjct: 338 SILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 397

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             ++P+ +TY AL+ GLC    + + + ++ EM +  + P   + F  L+     +G L 
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET-FNTLIDAYGTAGQLE 456

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
               VL  M +  I ++   +G +++ FCK      A+ +LD ++ K++    Q      
Sbjct: 457 KCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ------ 510

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              YN +I     +G T +A +   ++   GV    V +N L++G  +    D A E++ 
Sbjct: 511 --VYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            +  +G+  D  +Y  +I +   KG+   A   L  M + G  P      +++ +L   G
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAG 628

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           RV     + + M+ K V+ +  +   +++A
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 205/427 (48%), Gaps = 16/427 (3%)

Query: 154 SEGIEPT-RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           SEG  P    +YNV++ G + S K   A++ F++M   G++ + +TYNTMI+G+ +   +
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDL 245

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +   +L  +M     +P V++Y  ++ G     R D+   + DEM S  + P+  TY+ L
Sbjct: 246 EAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSIL 305

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
             GL   G+   +  +  E +++ +     +  + L G+ CK G +  A  V + ++   
Sbjct: 306 FDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGL-CKDGKVAKAKQVFEMLVHTG 364

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  LI  +C+      A  + +++  + I  RP         +YN +I  LC 
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI--RPDHI------TYNALINGLCK 416

Query: 393 NGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
                KAE    ++ K GV DP    FN LI  +   G  +  F ++  M ++G+  D  
Sbjct: 417 LEMVTKAEDLVMEMEKSGV-DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 475

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           ++  +++++ + G+  +A   LD MI    +P + ++ S++++  E G  + A  +++ M
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
              GV  ++     +L+ L     ++EA   I  +   G  P+   +++++S    KG T
Sbjct: 536 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 595

Query: 568 IAAVKLL 574
             A++LL
Sbjct: 596 DKALELL 602



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/405 (22%), Positives = 190/405 (46%), Gaps = 10/405 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L R G+++  R ++ +M    +  D   + +L +   + G  Q  + +F   
Sbjct: 266 TYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAES 325

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + GV     +   L   + + G+   AK+ F  ++  G+ PT   YN ++ G+     L
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDL 385

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A   FE MKSR I  D +TYN +ING  + + + +AE L  EM++  ++P+V ++ T+
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  Y    + +    +  +M+   +K + +++ +++   C  GK+ E   +L +M+ + +
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +  V+  ++    +SG    A  +++ M    +      Y +L++  C++   D A 
Sbjct: 506 AP-NAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 564

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-A 416
           +L+  L  +   LRP      +  SYN +I   C+ G T KA    +++ K G+   +  
Sbjct: 565 ELIYTLRNQG--LRP------DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 616

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
            + L+   +  G       + + M  + V   +  Y  ++++Y+R
Sbjct: 617 CHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 105/495 (21%), Positives = 199/495 (40%), Gaps = 44/495 (8%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P+  + N++L       +       F  + + G   D   +N ++        +D A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 219 FAEM--KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
              M   E    P   SY  +I G     +  DAL++FDEM    V PN +TY  ++ G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
              G + E    LR+ +    P  +   +  LL   C++G ++    ++  M   S+  +
Sbjct: 240 VKGGDL-EAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y IL +   +       + L  + ++K ++L         A + + ++  LC +G+ 
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVML--------GAYTCSILLNGLCKDGKV 350

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            KA+  F  L+  G V   V +N LI G+ +  +   AF I + M  R +  D   Y  L
Sbjct: 351 AKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I    +      A+  +  M + G  P+   F +++++    G+++    V+  M +KG+
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLD 575
           K +                                V +F S++    + GK   AV +LD
Sbjct: 471 KSD--------------------------------VISFGSVVKAFCKNGKIPEAVAILD 498

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             + +D   +   Y  ++DA + +G T  A  ++ K+   G      + + L+ GL +  
Sbjct: 499 DMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSS 558

Query: 636 NTKQADILSRMIRGE 650
              +A+ L   +R +
Sbjct: 559 QIDEAEELIYTLRNQ 573



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 138/288 (47%), Gaps = 2/288 (0%)

Query: 11  QNKIRALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           Q K R + P    +N + N L   +    A      +E++G+ +   ET   +I+  G  
Sbjct: 394 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV-DPSVETFNTLIDAYGTA 452

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+L     +L DM +KG++ D   F  +++++ K G + E+V I D M    V  + + Y
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           +++    +  G    A     KM + G+  +  TYN++L G   S +++ A      +++
Sbjct: 513 NSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +G+  DVV+YNT+I+        D+A +L  EM +  I PT+ +  T++    +  R  D
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHD 632

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
              ++ +M   +V+P++  Y  ++          +V  + +EM E+ I
Sbjct: 633 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 144/646 (22%), Positives = 289/646 (44%), Gaps = 37/646 (5%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAK--NSEHALQFFRWVERAGLFNHDRETHLKM 62
           +WT +L+ ++R L+       V  VL      ++  A +FFRW +R   + H  E   +M
Sbjct: 73  SWTPKLEAQLRHLLRVLSPPQVRAVLRAQAQGDARAAFEFFRWADRQWQYRHAPEVFDEM 132

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           + +L R    + AR ++  M ++GV+     F  L+ SY + G ++ ++++  +M+  G 
Sbjct: 133 LGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGC 192

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
              +   +    +++  GR   A  + ++M   G+EP   TYN ++ G     ++  A+ 
Sbjct: 193 APDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALE 252

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK-EKNIEPTVISYTTMIKGY 241
               M   G   D ++Y T+++   + K++ E   L A M+ +  +    ++Y  +I   
Sbjct: 253 MIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVL 312

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                AD+AL    E +    + + V Y+A++   C  G+M E ++++ EM+ +   P D
Sbjct: 313 AKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHP-D 371

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++   C+ G ++ A  ++K M +         +  L+   CK      A +LL+
Sbjct: 372 VVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLN 431

Query: 362 KLVEK---------EIIL-------RPQSTLDMEAS-----------SYNPMIQHLCHNG 394
           K  E           +++       + + + D+ A              N +I  LC  G
Sbjct: 432 KSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEG 491

Query: 395 QTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +A+ F  Q   KG  ++ V F  +I G S++G+ +SA  ++  +       D   Y 
Sbjct: 492 KPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYT 551

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            ++ +  RKG   +A   ++ M+  G  P    +R+V+    E G V+    ++  M+ +
Sbjct: 552 VVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLAR 611

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAA 570
             +E   +  +++E L   G + EA G +  ++++ S  +  +   L+     +G TI A
Sbjct: 612 --QELKSVYNQVIEKLCAFGKLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQA 669

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
             +      R+ I DL   +KV D L+   +   A  ++ K +E+G
Sbjct: 670 YNVACRMFQRNLIPDLKLCQKVDDRLVLEERKQAAGKLIVKFVERG 715



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 105/512 (20%), Positives = 209/512 (40%), Gaps = 81/512 (15%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
           R+    ++N    L  Q  +N++ +VL    +++ AL+F R  E    F  D   +  ++
Sbjct: 286 RSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESE-GKRFRVDEVGYSAVV 344

Query: 64  EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
                 G++  A+ I+ +M  K    D   +  +++ + + G + ++ K+   M + G +
Sbjct: 345 HSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCK 404

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
            ++ ++ AL   + + G+   A    NK   +   P+  TY+V++ GF    KL+ +   
Sbjct: 405 PNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDV 464

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
              M  +G     V  N +I+   +  K  EA++   + + K     V+++TT+I G+  
Sbjct: 465 VAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSR 524

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
               + AL + D++   +  P+ VTYT ++  L   G++ E   ++ +M+ R + P    
Sbjct: 525 QGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVP---- 580

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
                                       ++ T    Y  +I  +C+    +  + LLDK+
Sbjct: 581 ----------------------------TLVT----YRTVIHRYCEKGTVEELVDLLDKM 608

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRG 423
           + ++ +           S YN +I+ LC                        AF  L   
Sbjct: 609 LARQEL----------KSVYNQVIEKLC------------------------AFGKL--- 631

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
                  + A+ ++  + R    RDA     L+ES+L +G    A      M +    P 
Sbjct: 632 -------NEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPD 684

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
             L + V + L  + R Q A +++   VE+G+
Sbjct: 685 LKLCQKVDDRLVLEERKQAAGKLIVKFVERGL 716


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 135/543 (24%), Positives = 243/543 (44%), Gaps = 41/543 (7%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           L+  +L+   + E  L++F W ++    +H  E   +++  L    K +  R  L     
Sbjct: 1   LLQQLLNSGADPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFL----D 56

Query: 85  KGVQWDED----------------------MFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           K V++++D                      + ++L+ ++ +   +    + F      G 
Sbjct: 57  KFVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGF 116

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
           + S+ S + L   +++       +  + +M+   IE    ++N+++ G     KL  A  
Sbjct: 117 KLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGD 176

Query: 183 FFEDMKSRGISLDVVTYNTMINGY---NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
             EDMK  G+S +V+TYNT+I+GY    R  KM +A+ +  EM  K I P  ++Y  +I 
Sbjct: 177 VIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILID 236

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G+   E    A+R+F EM+   ++PN VTY  L+ GLC  GK+ E   +  +MV   + P
Sbjct: 237 GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP 296

Query: 300 KDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
             N V    L+   CK+  +N A ++   M +  +   A  Y  LI+ +CK    + A  
Sbjct: 297 --NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFA 354

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAF 417
           L + ++++ I   P      E S+YN +I  LC  G    A     +++ KK   D V +
Sbjct: 355 LYNMMIDRGIF--P------EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI    K+G    A +++  M  +G+      Y  L++ Y R+G    A      M  
Sbjct: 407 NILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMER 466

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G          +++     GR++ A+ ++  M+E+G+  N      I E ++ +G V +
Sbjct: 467 KGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPD 526

Query: 538 ALG 540
             G
Sbjct: 527 IEG 529



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 141/286 (49%), Gaps = 2/286 (0%)

Query: 15  RALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + + P +  +N++ +     +N   A++ F  ++R GL   +  T+  +I  L   GK++
Sbjct: 222 KGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGL-RPNVVTYNILINGLCSDGKVD 280

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +   M    ++ +     VLI  + K   V E++ +F+ M++ GV+ +  +Y  L 
Sbjct: 281 EAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLI 340

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
               + GR   A   +N M+  GI P   TYN ++ G      ++ A     +M S+ +S
Sbjct: 341 DAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLS 400

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DVVTYN +I+   +  +  +A KL  EM EK + P+ ++Y T++ GY        AL +
Sbjct: 401 ADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIV 460

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
              M+    + N VT+  L+ G C  G++ +   +L EM+ER + P
Sbjct: 461 RTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVP 506



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 150/333 (45%), Gaps = 16/333 (4%)

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V + MI+  I      + I++   CK    +RA  +++ +  K   + P         +Y
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDM--KVWGVSPNVI------TY 193

Query: 384 NPMIQHLCHNGQTGK---AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           N +I   C  G+ GK   A+   ++++ KG+  + V +N LI G  K+ N   A  +   
Sbjct: 194 NTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGE 253

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M R+G+  +   Y  LI      G+  +A    D M+     P       ++    ++  
Sbjct: 254 MQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKT 313

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDS 556
           V  A  +   M ++GV  N      +++A    G +E+A    ++M+  G  P    ++ 
Sbjct: 314 VNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNC 373

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L++ L  KG   AA  L++  + +    D+ +Y  ++D+L   G++  A  +L ++ EKG
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQADIL-SRMIR 648
                 + + L+ G  +EGN + A I+ +RM R
Sbjct: 434 LNPSHVTYNTLMDGYCREGNLRAALIVRTRMER 466


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 183/365 (50%), Gaps = 10/365 (2%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G++ D     +LI  +     V   + +   + +LG+E S+ ++  L   +   G+    
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
              ++ ML  G++P  +TYNV++     S K   A+ F + M+  G   +VV Y+T+I+G
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
           Y    +MDEA  +F  M  K   P V +YT+++ GY  +ER ++A+++ DE     + P+
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            VT+T ++ GLC AG+ +  Q++ R +      P   +  + L G+ CK G+L  A  + 
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGL-CKHGNLEEAFALF 330

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
           + M R ++      Y ILI++ CK        +L  +L+++   L+P         +Y  
Sbjct: 331 QEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEG--LKPN------VYTYTA 382

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++  LC  G   +A   FR++ + G   D  A+N +I+G  +  +P  A ++V+ M  RG
Sbjct: 383 LVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRG 442

Query: 445 VPRDA 449
              DA
Sbjct: 443 FSADA 447



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 182/389 (46%), Gaps = 10/389 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L  S  + G  +  V +   ++ LG+E+ + S   L        R        +K+L
Sbjct: 65  FSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKIL 124

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+EP+  T+  +L G  +  K++  +  ++DM  RG+  +V TYN +IN  ++  K +
Sbjct: 125 KLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKAN 184

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA     +M++    P V++Y+T+I GY    + D+A  +FD M S    PN  TYT+L+
Sbjct: 185 EALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLM 244

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C   ++ E  ++L E + + + P D   F  ++   C++G   AA  + + +     
Sbjct: 245 NGYCKIERIEEAVQLLDETLRKGLVP-DIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH 303

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 YG+L++  CK    + A  L  ++         +ST+      Y  +I  LC  
Sbjct: 304 TPNIMTYGVLLDGLCKHGNLEEAFALFQEM--------QRSTVKPNLVIYTILIDSLCKC 355

Query: 394 GQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+    +  F +L+ +G+   V  +  L+    KEG    A ++ + M   G   D  AY
Sbjct: 356 GKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAY 415

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHS 481
             +I+ +L+  +P+ A+  ++ M+  G S
Sbjct: 416 NVIIQGFLQHKDPSMARQLVEEMVNRGFS 444



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 35/265 (13%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK++    +  DM  +G+Q +   + V+I S  K G   E++     M+++G   +V +Y
Sbjct: 146 GKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNY 205

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             L      RG+   A+  F+ M+S+G  P  +TY  ++ G+    ++E A++  ++   
Sbjct: 206 STLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLR 265

Query: 190 RGISLDVVTYNTMINGYNRFKK-----------------------------------MDE 214
           +G+  D+VT+ T+I+G  R  +                                   ++E
Sbjct: 266 KGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEE 325

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A  LF EM+   ++P ++ YT +I       +  D   +F  +    +KPN  TYTAL+ 
Sbjct: 326 AFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVG 385

Query: 275 GLCDAGKMVEVQKVLREMVERYIPP 299
            LC  G ++E  K+ R+M E    P
Sbjct: 386 ALCKEGLIIEAHKLFRKMEEDGCTP 410



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 158/359 (44%), Gaps = 10/359 (2%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           +V ++ + +   R    +    L  E++   IE  + S + +I  +  + R D  L +  
Sbjct: 62  IVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLS 121

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           ++    ++P+ VT+T LL GLC  GKM +V  +  +M+ R + P +   +  ++    KS
Sbjct: 122 KILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQP-NVYTYNVIINSLSKS 180

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G  N A   LK M ++       +Y  LI+ +C     D A  + D +V K     P   
Sbjct: 181 GKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGC--TPN-- 236

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
                 +Y  ++   C   +  +A     + ++KG++ D V F  +I G  + G P +A 
Sbjct: 237 ----VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQ 292

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           ++ + +   G   +   Y  L++   + G   +A      M      P   ++  +++SL
Sbjct: 293 QLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSL 352

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            + G+++    +   ++++G+K N+     ++ AL   G + EA      M + G  P+
Sbjct: 353 CKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPD 411



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 161/397 (40%), Gaps = 13/397 (3%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           DDAL  F  M      P  V ++ L   +   G    V  + +E +E     +D      
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKE-IEFLGIEQDIHSLSI 102

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   C    ++    VL  +++L +      +  L+   C     D+ + L D ++ + 
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG 162

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSK 426
             L+P         +YN +I  L  +G+  +A  F +Q+ K G V + V ++ LI G+  
Sbjct: 163 --LQPN------VYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCL 214

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G  D A  +  +M  +G   +   Y  L+  Y +     +A   LD  +  G  P    
Sbjct: 215 RGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVT 274

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F +++  L   GR   A ++ + +   G   N+     +L+ L   G++EEA      M 
Sbjct: 275 FTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQ 334

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
           +S   PN   +  L+  L + GK     +L    +      ++ +Y  ++ AL   G  +
Sbjct: 335 RSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLII 394

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            A+ +  K+ E G   D  + + +I G  Q  +   A
Sbjct: 395 EAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMA 431



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/291 (21%), Positives = 124/291 (42%), Gaps = 37/291 (12%)

Query: 14  IRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           +R L P  + +N++ N L  +  +  AL F + +E+ G    +   +  +I+     G++
Sbjct: 160 VRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVP-NVVNYSTLIDGYCLRGQM 218

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + AR +   M  KG   +   +  L+  Y K   ++E+V++ D   + G+   + ++  +
Sbjct: 219 DEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTI 278

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + R GR + A++ F  + + G  P   TY V+L G      LE A   F++M+   +
Sbjct: 279 ISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTV 338

Query: 193 SLDVVTYNTMINGYNRFKKMD-----------------------------------EAEK 217
             ++V Y  +I+   +  K+                                    EA K
Sbjct: 339 KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK 398

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
           LF +M+E    P   +Y  +I+G++  +    A ++ +EM +     +A T
Sbjct: 399 LFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 143/660 (21%), Positives = 277/660 (41%), Gaps = 52/660 (7%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W   L+N + AL  +    LV  VL   K++  A+ +F+W E+     H  E +  ++ +
Sbjct: 75  WGPTLENSLSALGEKPLPELVIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMV 134

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI------------ 113
           + R  + +H   IL +M   G     ++   L+ +  K   ++E+  I            
Sbjct: 135 MARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPA 194

Query: 114 -----------------------FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
                                  F  M++LG E +V  +  L ++  R GR   A    +
Sbjct: 195 FSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLD 254

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +M S  ++     YNV +  F  + K++ + +FF +MKS G+  D VTY +MI    +  
Sbjct: 255 EMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKAN 314

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           ++DEA +LF ++++    P   +Y TMI GY +  + D+A  + +  K+    P+ + Y 
Sbjct: 315 RLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYN 374

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            +L  L    ++ E  ++  EM    +P  +   +  L+ + C+ G LNAA ++   M R
Sbjct: 375 CILTCLGKKRRVEEALRIFEEMKRDAVP--NVPTYNILIDMLCREGKLNAALEIRDDMER 432

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +        I+I+  CKA+  + A  + + + +K  +  P       A +++ +I  L
Sbjct: 433 AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK--VCTPN------AVTFSSLIDGL 484

Query: 391 CHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              G+   A   + +++  G V   + + +LIR   K G  +   +I K M   G   D 
Sbjct: 485 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 544

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
                 ++   + GE    +     +   G  P +  +  ++  L + G       +  +
Sbjct: 545 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 604

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGK 566
           M E+G   +      +++     G V +A   ++ M   G  P    + S++  L++  +
Sbjct: 605 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 664

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG---GVTDWKS 623
              A  L +        +++  Y  ++D     G+   AY I+ ++M+KG    V  W  
Sbjct: 665 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 724



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 146/604 (24%), Positives = 264/604 (43%), Gaps = 48/604 (7%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G + +  +F  LI  + ++G V  ++ + D MK   ++  +  Y+       + G+
Sbjct: 221 MQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGK 280

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             M+ ++F++M S G+ P   TY  M+     + +L+ A+  FE ++          YNT
Sbjct: 281 VDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNT 340

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           MI GY    K DEA  L    K K   P+VI+Y  ++       R ++ALRIF+EMK  D
Sbjct: 341 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-D 399

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             PN  TY  L+  LC  GK+    ++  +M    + P   +V + ++   CK+  L  A
Sbjct: 400 AVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNI-MIDRLCKAQKLEEA 458

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE---------------- 365
             + + M        A  +  LI+   K    D A  L +K+++                
Sbjct: 459 CSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRS 518

Query: 366 --------------KEII---LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
                         KE++     P  TL       N  +  +   G+T K    FR++  
Sbjct: 519 FFKCGRKEDGHKIYKEMVHTGCSPDLTL------INTYMDCVFKAGETEKGRALFREINA 572

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G + D  +++ LI G  K G  +  +E+   M  +G   D  AY  +I+ + + G+   
Sbjct: 573 HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK 632

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A   L+ M   GH P    + SV++ L +  R+  A  + +     G+K N+ + + +++
Sbjct: 633 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 692

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                G ++EA   ++ +MQ G  PN   ++ LL  L +  +   A+          C  
Sbjct: 693 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 752

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQAD-I 642
           +  +Y  +++ L    K   A+ + ++ M+K G+  +  +   +I+GL + GN  +A  +
Sbjct: 753 NQITYSILINGLCRVRKFNKAF-VFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 811

Query: 643 LSRM 646
            SR 
Sbjct: 812 FSRF 815



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 139/632 (21%), Positives = 281/632 (44%), Gaps = 19/632 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+  +    A   + + +FF  ++  GL   D  T+  MI +L +  +L+ A  +   +
Sbjct: 268 YNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDV-TYTSMIGVLCKANRLDEAVELFEQL 326

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            +         +  +I  YG  G   E+  + +  K  G   SV +Y+ +   + ++ R 
Sbjct: 327 EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRV 386

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R F +M  + + P   TYN+++       KL  A+   +DM+  G+  +V+T N M
Sbjct: 387 EEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 445

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+   + +K++EA  +F  M +K   P  ++++++I G     R DDA  ++++M     
Sbjct: 446 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 505

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P A+ YT+L+      G+  +  K+ +EMV     P D ++    +    K+G      
Sbjct: 506 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP-DLTLINTYMDCVFKAGETEKGR 564

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            + + +       +A  Y ILI    KA + +   +L   + E+  +L        +  +
Sbjct: 565 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVL--------DTHA 616

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP---VAFNNLIRGHSKEGNPDSAFEIVKI 439
           YN +I   C +G+  KA     ++  KG   P   V + ++I G +K    D A+ + + 
Sbjct: 617 YNAVIDGFCKSGKVNKAYQLLEEMKVKG--HPPTVVTYGSVIDGLAKIDRLDEAYMLFEE 674

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
               G+  +   Y  LI+ + + G   +A   ++ +++ G +P    +  ++++L +   
Sbjct: 675 AKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 734

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           +  A    +SM +     N    + ++  L       +A      M + G  PN   + +
Sbjct: 735 INEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTT 794

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           ++S L++ G  + A  L         I D ASY  +++ L +A K ++AY++  +   KG
Sbjct: 795 MISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKG 854

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
                K+   L+  L++    +QA I+  +++
Sbjct: 855 CNIHTKTCVVLLDALHKAECLEQAAIVGAVLK 886



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 122/536 (22%), Positives = 225/536 (41%), Gaps = 33/536 (6%)

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           ++Y++L  ++ R   +   +R   +M   G  P+ +    ++     S KL  A    + 
Sbjct: 126 EAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQT 185

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M+          Y  +I   +  ++ D    LF +M+E   E  V  +TT+I+ +    R
Sbjct: 186 MRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGR 245

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            D AL + DEMKS  +  + V Y   +     AGK+    K   EM    + P D+  + 
Sbjct: 246 VDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMP-DDVTYT 304

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK---- 362
            ++GV CK+  L+ A ++ + + +      A  Y  +I  +  A  +D A  LL++    
Sbjct: 305 SMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAK 364

Query: 363 -----LVEKEIIL-------RPQSTLDM----------EASSYNPMIQHLCHNGQTGKAE 400
                ++    IL       R +  L +             +YN +I  LC  G+   A 
Sbjct: 365 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKL-NAA 423

Query: 401 IFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           +  R  M++  L P  +  N +I    K    + A  I + M  +    +A  +  LI+ 
Sbjct: 424 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 483

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             + G   DA +  + M++ GH P + ++ S++ S F+ GR +   ++ K MV  G   +
Sbjct: 484 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           L L+   ++ +   G  E+       +   G +P+   +  L+  L + G      +L  
Sbjct: 544 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 603

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
               + C++D  +Y  V+D    +GK   AY +L ++  KG      +   +I GL
Sbjct: 604 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 659



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 121/539 (22%), Positives = 228/539 (42%), Gaps = 15/539 (2%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           + A+    + K +  +P    +N +   L   +  E AL+ F  ++R  + N    T+  
Sbjct: 352 DEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPN--VPTYNI 409

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I++L R GKLN A  I  DM + G+  +     ++I+   K   ++E+  IF+ M    
Sbjct: 410 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 469

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +  ++ +L   + + GR   A   + KML  G  P    Y  ++  FF   + E   
Sbjct: 470 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 529

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + +++M   G S D+   NT ++   +  + ++   LF E+      P   SY+ +I G 
Sbjct: 530 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 589

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           V    A++   +F  MK      +   Y A++ G C +GK+ +  ++L EM  +  PP  
Sbjct: 590 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 649

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +    + G+  K   L+ A  + +      I      Y  LI+ F K    D A  +++
Sbjct: 650 VTYGSVIDGLA-KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 708

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
           +L++K         L     ++N ++  L    +  +A I F Q MK     P  + ++ 
Sbjct: 709 ELMQK--------GLTPNVYTWNCLLDALVKAEEINEALICF-QSMKDLKCPPNQITYSI 759

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  +    + AF   + M + G+  +   Y  +I    + G   +A         +G
Sbjct: 760 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 819

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
             P S+ + +++E L    +   A  + +    KG   +      +L+AL     +E+A
Sbjct: 820 GIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878


>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
          Length = 696

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 142/587 (24%), Positives = 261/587 (44%), Gaps = 24/587 (4%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEH------ALQFFRWVERAGL-FN 53
           +AE  W  RL  +  A +P+     V   L  A   E        ++ + W  R G  F 
Sbjct: 56  LAEDDWFPRLNAEFAAALPRLGPRFVVRALRAAAEREGVGEPLLCVRLYVWASRFGAHFA 115

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
            D      ++  L R G +  +  ++ ++   G +  E++   L+ES+G+ G+ + + ++
Sbjct: 116 RDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEV 175

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           F  M +LG+  S   Y+AL    +R G    A   F +M ++G  P R TYN ++ G   
Sbjct: 176 FVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCR 235

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
              ++ A+R    M+  GI  +V TY  +++G+    +++EA ++  +MKEK + P+  +
Sbjct: 236 RGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEAT 295

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y T++ G       D A R+  +    +   +      +L  L       E  +  + M 
Sbjct: 296 YRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRMS 355

Query: 294 ER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
            R Y+   D++ F  ++    K   ++   ++L + I+         Y ++I++    + 
Sbjct: 356 ARGYL--LDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKN 413

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           + +A   L  +V K ++            SYN +I      G   KAE   +++  KG L
Sbjct: 414 FSKANHYLGHMVLKGLL--------SSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFL 465

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            + V FN LI G+SK GN  +A  ++K++   G   D   +  LI+      +  DA   
Sbjct: 466 PNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVC 525

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN-LDLVAKILEALL 530
            + M E G  P +  +  +M +L   G V  A  ++  M   GV  +     A IL    
Sbjct: 526 FEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCR 585

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           MR  V++A    + M++ G VP+   ++SL+  L ++ +   A ++L
Sbjct: 586 MR-KVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEIL 631



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/328 (21%), Positives = 136/328 (41%), Gaps = 41/328 (12%)

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
           L +   +  +  P+  L    + YN +I      G    A + F+Q+   G   D   +N
Sbjct: 168 LARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYN 227

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           +L+ G  + G  D A  +V+ M   G+  +   Y  L++ +   G   +A   LD M E 
Sbjct: 228 SLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEK 287

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVM------------------------KSMVEKG 514
           G +P+ + +R+++  +F       A R++                        K M ++ 
Sbjct: 288 GVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEA 347

Query: 515 VKENLDLVAK-----------ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL----S 559
           V+    + A+           ++   L    V +    +D  +++G  P FD  +    S
Sbjct: 348 VEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKS 407

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           +L+ K  + A   L    L +  +  + SY  V+D  + AG    A  I+ ++ +KG + 
Sbjct: 408 LLNCKNFSKANHYLGHMVL-KGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLP 466

Query: 620 DWKSSDKLIAGLNQEGNTKQADILSRMI 647
           +  + + LI+G ++ GN   A ++ +M+
Sbjct: 467 NLVTFNTLISGYSKLGNVHNAKVVLKML 494


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 230/493 (46%), Gaps = 15/493 (3%)

Query: 26  VYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            YN ++HG  +S   + A+ F + +   G+   D  T+  +++ L + G+   AR +   
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K+G++ +   +  L++ Y  KG + E   + D+M + G+  +   +  L     ++G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F+KM  +G+ P   TY  ++     S ++E A+R+FE M    +S   + YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+    F K D+A++L  EM ++ I    I + ++I  +    R  ++ ++FD M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           VKPN +TY+ L+ G C AGKM E  K+L  MV   + P D   +  L+   CK   +  A
Sbjct: 510 VKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-DCVTYNTLINGYCKISRMEDA 568

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             + + M    +  +   Y I+++   +      A +L   + E        S   +E S
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE--------SGTQLELS 620

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN ++  LC N  T +A   F+ L    + L+   FN +I    K G  D A ++   +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  D   Y  + E+ + +G   +      SM E+G +  S +  S++  L + G +
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740

Query: 501 QTASRVMKSMVEK 513
             A   +  + EK
Sbjct: 741 TRAGTYLFMIDEK 753



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 147/643 (22%), Positives = 282/643 (43%), Gaps = 67/643 (10%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI-FDIMKQLGVERSVKS 128
           G+L+     L ++ KKG + D   F  L++         +++ I    M QLG   +V S
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEG--IEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           Y+ L K +    R   A      M  +G    P   +Y  ++ GFF    L+ A   + +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M  RGI  +VVTYN++I    + + MD+A ++   M +  + P   +Y +++ GY +  +
Sbjct: 225 MLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK------ 300
             +A+    +M S  V+P+ VTY +L+  LC  G+  E +K+   M +R + P+      
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 301 ----------------------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
                                       ++ VF  L+    K G ++ A  V   M +  
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   YG +I   CK+   + A++  ++++++   L P + +      YN +I  LC 
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER--LSPGNIV------YNSLIHSLCI 456

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  KA+    +++ +G+ LD + FN++I  H KEG    + ++  +M R GV  +   
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIIT 516

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+ Y   G+  +A   L SM+  G  P    + +++    +  R++ A  + + M 
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNFDSLLSVLSEKGKTI 568
             GV  ++     IL+ L        A      + +SG+   +  ++ +L  L +   T 
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636

Query: 569 AAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS---- 623
            A+++  + CL  D  ++  ++  ++ ALL  G+   A  +   +   G V D ++    
Sbjct: 637 EALRMFQNLCL-TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 624 SDKLI------------AGLNQEGNTKQADILSRMIRGEMSRG 654
           ++ LI              + + G T  + +L+ ++R  + RG
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/575 (22%), Positives = 253/575 (44%), Gaps = 21/575 (3%)

Query: 82  MPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
           MP  G     D+  +  +I  + K+G + ++   +  M   G+  +V +Y+++   + + 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKA 247

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                A      M+  G+ P   TYN ++ G+  S + + AI F + M S G+  DVVTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N++++   +  +  EA K+F  M ++ ++P + +Y T+++GY       +   + D M  
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + PN   ++ L+      GK+ +   V  +M ++ + P D   +  ++G+ CKSG + 
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-DTVTYGTVIGILCKSGRVE 426

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A    + MI   +      Y  LI + C  + +D+A +L+ +++++ I L        +
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL--------D 478

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              +N +I   C  G+  ++E  F  +++ GV  + + ++ LI G+   G  D A +++ 
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G+  D   Y  LI  Y +     DA      M   G SP    +  +++ LF+  
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL------GRIDLMMQSGSVP 552
           R   A  +   + E G +  L     IL  L      +EAL         DL +++ +  
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT-- 656

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F+ ++  L + G+   A  L         + D+ +Y  + + L+  G       +   +
Sbjct: 657 -FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 715

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            E G   + +  + ++  L Q G+  +A     MI
Sbjct: 716 EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 209/440 (47%), Gaps = 16/440 (3%)

Query: 79  LLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           LLD M + G+  +  +F +LI +Y K+G V +++ +F  M+Q G+     +Y  +  ++ 
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A RYF +M+ E + P    YN ++    +  K + A     +M  RGI LD +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +N++I+ + +  ++ E+EKLF  M    ++P +I+Y+T+I GY    + D+A ++   M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  +KP+ VTY  L+ G C   +M +   + REM    + P   +  + L G+  ++  
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF-QTRR 599

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             AA ++   +       E   Y I++   CK  + D A+++   L   +        L 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--------LQ 651

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
           +E  ++N MI  L   G+  +A+  F  L   G++  V  ++ +     ++G  +   ++
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G   ++     ++   L++G+   A T L  MI++ H    +   S+   L  
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYL-FMIDEKHFSLEASTASLFLDLLS 770

Query: 497 DGRVQTASRVM----KSMVE 512
            G+ Q   R +    KS +E
Sbjct: 771 GGKYQEYHRFLPEKYKSFIE 790



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 228/509 (44%), Gaps = 29/509 (5%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L +   ++ A  +L  M K GV  +   +  ++  Y   G  +E++     M
Sbjct: 236 TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              GVE  V +Y++L   + + GR   A++ F+ M   G++P   TY  +L G+     L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                  + M   GI  +   ++ +I  Y +  K+D+A  +F++M+++ + P  ++Y T+
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I       R +DA+R F++M    + P  + Y +L+  LC   K  + ++++ EM++R I
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D   F  ++   CK G +  +  +   M+R+ +      Y  LI+ +C A   D A 
Sbjct: 476 -CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534

Query: 358 KLLDKLVEKEI----------------ILRPQSTL----DMEAS-------SYNPMIQHL 390
           KLL  +V   +                I R +  L    +ME+S       +YN ++Q L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
               +T  A+  +  + + G  L+   +N ++ G  K    D A  + + +    +  + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             +  +I + L+ G   +AK    ++  +G  P    +  + E+L E G ++    +  S
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEA 538
           M E G   N  ++  I+  LL RG +  A
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 206/465 (44%), Gaps = 19/465 (4%)

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           ++ ++ TY  +I       ++D        + +K      I++T ++KG  A +R  DA+
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 252 RI-FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY--IPPKDNSVFMKL 308
            I    M      PN  +Y  LL GLCD  +  E  ++L+ M +     PP D   +  +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP-DVVSYTTV 205

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +    K G L+ A      M+   I      Y  +I   CKA+  D+A+++L  +V+  +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           +  P         +YN ++   C +GQ  +A  F +++   GV  D V +N+L+    K 
Sbjct: 266 M--PN------CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G    A ++   M +RG+  +   Y  L++ Y  KG   +    LD M+ +G  P   +F
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++ +  + G+V  A  V   M ++G+  +      ++  L   G VE+A+   + M+ 
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
               P    ++SL+  L    K   A +L+   L R   +D   +  ++D+    G+ + 
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 605 AYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           +   LF +M + GV  +  +   LI G    G   +A  +L+ M+
Sbjct: 498 SEK-LFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMV 541



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 156/350 (44%), Gaps = 12/350 (3%)

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           +V PN  TY  L+   C AG++      L  ++++     D   F  LL   C     + 
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSD 144

Query: 321 AAD-VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           A D VL+ M +L        Y IL++  C       A++LL  + +      P      +
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP------D 198

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             SY  +I      G   KA   + +++ +G+L + V +N++I    K    D A E++ 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLT 258

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M + GV  +   Y  ++  Y   G+P +A   L  M  DG  P    + S+M+ L ++G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           R   A ++  SM ++G+K  +     +L+    +G + E  G +DLM+++G  PN   F 
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
            L+   +++GK   A+ +      +    D  +Y  V+  L  +G+  +A
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 140/606 (23%), Positives = 270/606 (44%), Gaps = 15/606 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL  F  +   G+F      ++ ++  L R  +     C   D+  KGV  D  +F   I
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNI-LLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAI 256

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            ++ K G V+E+VK+F  M++ GV  +V +++ +   +   GRY  A  +  KM+  G+E
Sbjct: 257 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 316

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT  TY++++ G   + ++  A    ++M  +G   +V+ YN +I+ +     +++A ++
Sbjct: 317 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 376

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              M  K +  T  +Y T+IKGY    +AD+A R+  EM S     N  ++T+++  LC 
Sbjct: 377 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 436

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
                   + + EM+ R + P    +   L+   CK G  + A ++    +      +  
Sbjct: 437 HLMFDSALRFVGEMLLRNMSP-GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 495

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
               L+   C+A   D A +     ++KEI+ R      M+  SYN +I   C   +  +
Sbjct: 496 TSNALLHGLCEAGKLDEAFR-----IQKEILGR---GCVMDRVSYNTLISGCCGKKKLDE 547

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A +F  +++K+G+  D   ++ LI G       + A +      R G+  D   Y  +I+
Sbjct: 548 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 607

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
              +     + +   D M+     P + ++  ++ +    GR+  A  + + M  KG+  
Sbjct: 608 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 667

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           N      +++ + +   VEEA    + M   G  PN   + +L+    + G+ +    LL
Sbjct: 668 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 727

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                ++   +  +Y  ++      G    A  +L ++ EKG V D  +  + I G  ++
Sbjct: 728 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 787

Query: 635 GNTKQA 640
           G   +A
Sbjct: 788 GGVLEA 793



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 217/484 (44%), Gaps = 12/484 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +++ L R  ++  A  +L +M KKG   +  ++  LI+S+ + G + ++++I D+M
Sbjct: 321 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 380

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+  +  +Y+ L K   + G+   A+R   +MLS G    + ++  ++      L  
Sbjct: 381 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 440

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           ++A+RF  +M  R +S       T+I+G  +  K  +A +L+ +   K       +   +
Sbjct: 441 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 500

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G     + D+A RI  E+       + V+Y  L+ G C   K+ E    L EMV+R +
Sbjct: 501 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 560

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P DN  +  L+        +  A        R  +  +   Y ++I+  CKAE  +   
Sbjct: 561 KP-DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 619

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--V 415
           +  D+++ K +  +P + +      YN +I+  C +G+   A +  R+ MK   + P   
Sbjct: 620 EFFDEMMSKNV--QPNTVV------YNHLIRAYCRSGRLSMA-LELREDMKHKGISPNSA 670

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            + +LI+G S     + A  + + M   G+  +   Y  LI+ Y + G+    +  L  M
Sbjct: 671 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 730

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                 P    +  ++     DG V  ASR++  M EKG+  +     + +   L +G V
Sbjct: 731 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 790

Query: 536 EEAL 539
            EA 
Sbjct: 791 LEAF 794



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/518 (22%), Positives = 231/518 (44%), Gaps = 11/518 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A++ F  +E AG+   +  T   +I+ LG  G+ + A      M ++G++     + +
Sbjct: 266 EEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 324

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L++   +   + ++  +   M + G   +V  Y+ L    +  G    A    + M+S+G
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 384

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +  T  TYN ++ G+  + + + A R  ++M S G +++  ++ ++I         D A 
Sbjct: 385 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 444

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +   EM  +N+ P     TT+I G     +   AL ++ +  +     +  T  ALL GL
Sbjct: 445 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 504

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C+AGK+ E  ++ +E++ R     D   +  L+   C    L+ A   L  M++  +  +
Sbjct: 505 CEAGKLDEAFRIQKEILGRGC-VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 563

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y ILI         + AI+  D      ++  P      +  +Y+ MI   C   +T
Sbjct: 564 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGML--P------DVYTYSVMIDGCCKAERT 615

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            + + FF ++M K V  + V +N+LIR + + G    A E+ + M  +G+  ++  Y  L
Sbjct: 616 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 675

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+         +AK   + M  +G  P    + ++++   + G++     +++ M  K V
Sbjct: 676 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 735

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             N      ++      G+V EA   ++ M + G VP+
Sbjct: 736 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 773



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 4/319 (1%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           HG K+S+    +F+++ +   F  D  T   ++  L   GKL+ A  I  ++  +G   D
Sbjct: 472 HG-KHSKALELWFQFLNKG--FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 528

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
              +  LI     K  + E+    D M + G++    +Y  L   +    +   A ++++
Sbjct: 529 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 588

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
                G+ P  +TY+VM+ G   + + E    FF++M S+ +  + V YN +I  Y R  
Sbjct: 589 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 648

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           ++  A +L  +MK K I P   +YT++IKG   + R ++A  +F+EM+   ++PN   YT
Sbjct: 649 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 708

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           AL+ G    G+MV+V+ +LREM  + + P +   +  ++G   + G++  A+ +L  M  
Sbjct: 709 ALIDGYGKLGQMVKVECLLREMHSKNVHP-NKITYTVMIGGYARDGNVTEASRLLNEMRE 767

Query: 331 LSIPTEAGHYGILIENFCK 349
             I  ++  Y   I  + K
Sbjct: 768 KGIVPDSITYKEFIYGYLK 786



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 4/282 (1%)

Query: 9   RLQNKIR---ALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           R+Q +I     ++ +  +N + +   G K  + A  F   + + GL   D  T+  +I  
Sbjct: 515 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL-KPDNYTYSILICG 573

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L  + K+  A     D  + G+  D   + V+I+   K    +E  + FD M    V+ +
Sbjct: 574 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 633

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
              Y+ L +   R GR  MA      M  +GI P   TY  ++ G  +  ++E A   FE
Sbjct: 634 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 693

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+  G+  +V  Y  +I+GY +  +M + E L  EM  KN+ P  I+YT MI GY    
Sbjct: 694 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 753

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
              +A R+ +EM+   + P+++TY   + G    G ++E  K
Sbjct: 754 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 146/624 (23%), Positives = 281/624 (45%), Gaps = 19/624 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            N+V+ +   A +   ALQ F+ V +     H  E+   M+E++   G++     +   M
Sbjct: 79  QNVVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLM 138

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++ V+ +   F  +  S G +G ++ +     +MK+ G+  +  +Y+ L   +++ G  
Sbjct: 139 QRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYD 198

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   +  M ++GI P+  TY+V++  F     +ET +    +M+  G+  +V +Y   
Sbjct: 199 REAMEVYKVMATDGIVPSVRTYSVLMLAFG-KRDVETVVWLLREMEDHGVKPNVYSYTIC 257

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I    +  + +EA K+  +M+++  +P V++ T +I+      R  DA  +F +MK+ D 
Sbjct: 258 IRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQ 317

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSV-FMKLLGVQCKSGHLNA 320
           KP+ VTY  LL    D G    V ++   M  + Y    DN V +  ++   C+ G ++ 
Sbjct: 318 KPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGY---NDNVVAYTAVVDALCQVGRVDE 374

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A+DV   M +  I  +   Y  LI  F KA+  + A++L + +     I  P        
Sbjct: 375 ASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMN----IHGPTPN----G 426

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y   I +   +G++ KA   +  +  KG++ D VA N ++   +K G    A  +   
Sbjct: 427 YTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHE 486

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +   GV  D   Y  +I+   +     +A      MIE    P      S++++L++ GR
Sbjct: 487 LKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGR 546

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
              A ++   + E  +         +L  L   G V+E +  ++ M  +   PN   +++
Sbjct: 547 GNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNT 606

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           +L  L + G+   A+ +L     + C+ DL+SY   L  L+   +   A+ I F  M+K 
Sbjct: 607 VLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRI-FCQMKKV 665

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQA 640
              D+ +   ++    + G   +A
Sbjct: 666 LAPDYTTLCTILPSFVKNGLMNEA 689



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 158/659 (23%), Positives = 282/659 (42%), Gaps = 67/659 (10%)

Query: 48   RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV 107
            +A  +N +   +  +++ L +VG+++ A  +   M +KG++  +  +  LI  + K   +
Sbjct: 348  KADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRL 407

Query: 108  QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
              ++++F+ M   G   +  +Y        + G  + A + +  M S+GI P     N +
Sbjct: 408  NHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAV 467

Query: 168  LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
            L+    S +L  A R F ++KS G+  D +TY  MI   ++    DEA K+F+EM E   
Sbjct: 468  LYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRC 527

Query: 228  EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
             P V++  ++I       R ++A +IF E+K  ++ P   TY  LL GL   GK+ EV  
Sbjct: 528  VPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMH 587

Query: 288  VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM-IRLSIPTEAGH----YGI 342
            +L EM     PP +   +  +L   CK+G +N A  +L  M ++  +P  + +    +G+
Sbjct: 588  LLEEMNSNSYPP-NLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGL 646

Query: 343  LIEN--------FCK-----AEMYDRAIKLLDKLVE-----------KEIILRPQSTLD- 377
            + E+        FC+     A  Y     +L   V+           KE IL+P S  D 
Sbjct: 647  VKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADR 706

Query: 378  ---------------MEAS-----------------SYNPMIQHLCHNGQTGKAEIFFRQ 405
                           ME S                   +P+I+HLC + +  +A    ++
Sbjct: 707  SSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKK 766

Query: 406  LMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
                GV L   ++N LI G   E   D A  +   M R G   D   Y  ++++  +   
Sbjct: 767  FESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMR 826

Query: 465  PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              D       M   G+      + +++  L +   +  A  +   ++ +G          
Sbjct: 827  IEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGP 886

Query: 525  ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
            +L+ LL  G +E+A    D M+  G  PN   ++ LL+     G T    +L    + + 
Sbjct: 887  LLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQG 946

Query: 582  CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
               D+ SY  ++ AL  AG+  ++ S   ++ E G   D  + + LI GL + G  ++A
Sbjct: 947  INPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEA 1005



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 203/445 (45%), Gaps = 27/445 (6%)

Query: 16   ALVPQFDHNLVYN-VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG---K 71
             ++P F  N + N  LH  K  E+ LQ     +R+         H  M  IL R G    
Sbjct: 675  TILPSFVKNGLMNEALHTLK--EYILQPGSKADRSSF-------HSLMEGILKRAGMEKS 725

Query: 72   LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
            +  A  I L      +  D+     LI    K     E+ ++    + LGV     SY+A
Sbjct: 726  IEFAENIALSR----ILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNA 781

Query: 132  LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
            L   ++      +A+  F++M   G +P   TYN++L     S+++E  ++  ++M  +G
Sbjct: 782  LICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKG 841

Query: 192  ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
                 VTYNT+I+G  + K + EA  L+ ++  +   PT  +Y  ++ G +   + +DA 
Sbjct: 842  YESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAE 901

Query: 252  RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
             +FDEM  +  KPN   Y  LL G   AG   +V ++ + MV++ I P D   +  L+G 
Sbjct: 902  DLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINP-DIKSYTVLIGA 960

Query: 312  QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
             C +G LN +    + +  L +  +   Y +LI    ++   + A+ L + +        
Sbjct: 961  LCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDM-------- 1012

Query: 372  PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNP 430
             +S +     +YN +I +L   G+  +A   + +L+K G    V  +N LI G+S  G+ 
Sbjct: 1013 EKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGST 1072

Query: 431  DSAFEIVKIMGRRGVPRDADAYICL 455
            D+AF     M   G P ++  Y+ L
Sbjct: 1073 DNAFASYGQMIVGGCPPNSSTYMQL 1097



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 134/608 (22%), Positives = 254/608 (41%), Gaps = 67/608 (11%)

Query: 66   LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
            L + G+L  A+ +  ++   GV  D   + ++I+   K     E++K+F  M +      
Sbjct: 471  LAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPD 530

Query: 126  VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
            V + ++L   + + GR   A + F+++    ++PT  TYN +L G     K++  +   E
Sbjct: 531  VLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLE 590

Query: 186  DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            +M S     +++TYNT+++   +  +++ A  +   M  K   P + SY T + G V  +
Sbjct: 591  EMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKED 650

Query: 246  RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
            R  +A RIF +MK   + P+  T   +LP     G M E    L+E + +     D S F
Sbjct: 651  RLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSF 709

Query: 306  MKLL-------GVQ----------------------------CKSGHLNAAADVLKAMIR 330
              L+       G++                            CKS     A +++K    
Sbjct: 710  HSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFES 769

Query: 331  LSIPTEAGHYGILI-----ENF---------------CKAE--MYDRAIKLLDKLVEKEI 368
            L +  + G Y  LI     EN                C  +   Y+  +  + K +  E 
Sbjct: 770  LGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIED 829

Query: 369  ILRPQSTLDMEAS-----SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIR 422
            +L+ Q  +  +       +YN +I  L  +    +A   + +LM +G    P  +  L+ 
Sbjct: 830  MLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLD 889

Query: 423  GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
            G  K+G  + A ++   M   G   +   Y  L+  Y   G          +M++ G +P
Sbjct: 890  GLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINP 949

Query: 483  ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
                +  ++ +L   GR+  +    + + E G++ +L     ++  L   G +EEA+   
Sbjct: 950  DIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLF 1009

Query: 543  DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
            + M +SG  PN   ++SL+  L ++GK   A K+ +  L      ++ +Y  ++     +
Sbjct: 1010 NDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVS 1069

Query: 600  GKTLNAYS 607
            G T NA++
Sbjct: 1070 GSTDNAFA 1077


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 207/423 (48%), Gaps = 13/423 (3%)

Query: 28  NVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGV 87
           N L  A     AL+ F  +   G    D  T+  +I  L ++G+   A  ++  M + G 
Sbjct: 169 NGLCKAGEFAQALELFDDMVARGC-QPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
           Q D   +  LI+S  K  +V E++ IF  MK  G+  +V SY +L + +    R+  A  
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
             N+M S  I P   T+++++  F     +  A    + M   G+  +V+TYN++++GY+
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
              ++ EA KLF  M  +  +P V SY+ +I GY  V+R D+A ++F+EM    + PN V
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407

Query: 268 TYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           +YT L+   C  GK+ E +++ ++M    Y+P  D   +  LL   CK G+L  A  + +
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLP--DLCTYSVLLEGFCKQGYLGKAFRLFR 465

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
           AM    +      Y ILI++ CK+   + A KL  +L      L+P      +   Y  +
Sbjct: 466 AMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG--LQP------DVQIYTTI 517

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC  G   +A   FR++ + G   +  ++N +IRG  +  +   A +++  M  +G 
Sbjct: 518 INGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGF 577

Query: 446 PRD 448
             D
Sbjct: 578 VAD 580



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 199/438 (45%), Gaps = 10/438 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G+  +     +LI  +     V     +   + +LG++ ++ ++  L   + + G 
Sbjct: 117 MELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGE 176

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A   F+ M++ G +P  +TY  ++ G     +   A    + M   G   DVVTY+T
Sbjct: 177 FAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYST 236

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+   + + ++EA  +F+ MK K I PTV+SYT++I+G  +  R  +A  + +EM S +
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P+ VT++ L+   C  G ++E Q VL+ M E  + P +   +  L+        +  A
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEP-NVITYNSLMHGYSLQMEVVEA 355

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   MI      +   Y ILI  +C  +  D A +L ++++ +   L P +       
Sbjct: 356 RKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG--LTPNTV------ 407

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           SY  +I   C  G+  +A   F+ +   G L D   ++ L+ G  K+G    AF + + M
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM 467

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
               +  +   Y  LI+S  + G    A+     +   G  P   ++ +++  L ++G +
Sbjct: 468 QGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLL 527

Query: 501 QTASRVMKSMVEKGVKEN 518
             A    + M E G   N
Sbjct: 528 DEALEAFRKMEEDGCPPN 545



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 190/423 (44%), Gaps = 10/423 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I  L + G+   A  +  DM  +G Q D   +  +I    K G    +  +   M
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKM 222

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            ++G +  V +Y  L   + +      A   F+ M ++GI PT  +Y  ++ G     + 
Sbjct: 223 GEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRW 282

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A     +M S  I  D+VT++ +I+ + +   + EA+ +   M E  +EP VI+Y ++
Sbjct: 283 KEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSL 342

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + GY       +A ++FD M +   KP+  +Y+ L+ G C   ++ E +++  EM+ + +
Sbjct: 343 MHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P   S +  L+   C+ G L  A ++ K M       +   Y +L+E FCK     +A 
Sbjct: 403 TPNTVS-YTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAF 461

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA- 416
           +L   +  +   L+P   +      Y  +I  +C +G    A   F +L   G+   V  
Sbjct: 462 RLFRAM--QGTYLKPNLVM------YTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQI 513

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  +I G  KEG  D A E  + M   G P +  +Y  +I  +L+  + + A   +  M 
Sbjct: 514 YTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR 573

Query: 477 EDG 479
           + G
Sbjct: 574 DKG 576



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 187/446 (41%), Gaps = 26/446 (5%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  + K G+Q     F  LI    K G   +++++FD M   G +  V +Y  +   + 
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G    A     KM   G +P   TY+ ++        +  A+  F  MK++GIS  VV
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           +Y ++I G   F +  EA  +  EM   NI P +++++ +I  +       +A  +   M
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               V+PN +TY +L+ G     ++VE +K+   M+ R   P D   +  L+   C    
Sbjct: 328 TEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKP-DVFSYSILINGYCMVKR 386

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           ++ A  +   MI   +      Y  LI  FC+          L KL E   + +     D
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQ----------LGKLREARELFK-----D 431

Query: 378 MEASSYNP-------MIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEG 428
           M  + Y P       +++  C  G  GKA   FR  M+   L P  V +  LI    K G
Sbjct: 432 MHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRA-MQGTYLKPNLVMYTILIDSMCKSG 490

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           N + A ++   +   G+  D   Y  +I    ++G   +A  A   M EDG  P    + 
Sbjct: 491 NLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYN 550

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKG 514
            ++    +      A +++  M +KG
Sbjct: 551 VIIRGFLQHKDESRAVQLIGEMRDKG 576



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/498 (22%), Positives = 216/498 (43%), Gaps = 16/498 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFF-LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           FN ML     P    +N +L     +    +  I   + M+  G+S +  T N +IN + 
Sbjct: 78  FNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFC 137

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
             + +D    + A++ +  ++PT+I++TT+I G         AL +FD+M +   +P+  
Sbjct: 138 LMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVY 197

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           TYT ++ GLC  G+      ++++M E    P D   +  L+   CK   +N A D+   
Sbjct: 198 TYTTIINGLCKMGETAAAAGLIKKMGEVGCQP-DVVTYSTLIDSLCKDRLVNEALDIFSY 256

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M    I      Y  LI+  C    +  A  +L+++    I+  P      +  +++ +I
Sbjct: 257 MKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIM--P------DIVTFSLLI 308

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
              C  G   +A+   + + + GV +P  + +N+L+ G+S +     A ++  +M  RG 
Sbjct: 309 DIFCKEGNVLEAQGVLKTMTEMGV-EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGC 367

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D  +Y  LI  Y       +AK   + MI  G +P +  + +++ +  + G+++ A  
Sbjct: 368 KPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARE 427

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           + K M   G   +L   + +LE    +G++ +A      M  +   PN   +  L+  + 
Sbjct: 428 LFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMC 487

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           + G    A KL           D+  Y  +++ L   G    A     K+ E G   +  
Sbjct: 488 KSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEF 547

Query: 623 SSDKLIAGLNQEGNTKQA 640
           S + +I G  Q  +  +A
Sbjct: 548 SYNVIIRGFLQHKDESRA 565



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/474 (22%), Positives = 190/474 (40%), Gaps = 49/474 (10%)

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA---------------- 250
           + F+ +D+A   F  M  +   P +I +  ++   V + +  DA                
Sbjct: 66  SSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPN 125

Query: 251 -------LRIFDEMKSFD-------------VKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
                  +  F  M+  D             ++P  +T+T L+ GLC AG+  +  ++  
Sbjct: 126 TCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFD 185

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           +MV R   P D   +  ++   CK G   AAA ++K M  +    +   Y  LI++ CK 
Sbjct: 186 DMVARGCQP-DVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKD 244

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
            + + A+ +   +  K I             SY  +IQ LC   +  +A     ++    
Sbjct: 245 RLVNEALDIFSYMKAKGI--------SPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           ++ D V F+ LI    KEGN   A  ++K M   GV  +   Y  L+  Y  + E  +A+
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEAR 356

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              D MI  G  P    +  ++       R+  A ++   M+ +G+  N      ++ A 
Sbjct: 357 KLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAF 416

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
              G + EA      M  +G +P+   +  LL    ++G    A +L     G     +L
Sbjct: 417 CQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNL 476

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             Y  ++D++  +G   +A  +  ++   G   D +    +I GL +EG   +A
Sbjct: 477 VMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEA 530


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 140/606 (23%), Positives = 270/606 (44%), Gaps = 15/606 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL  F  +   G+F      ++ ++  L R  +     C   D+  KGV  D  +F   I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNI-LLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAI 267

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            ++ K G V+E+VK+F  M++ GV  +V +++ +   +   GRY  A  +  KM+  G+E
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT  TY++++ G   + ++  A    ++M  +G   +V+ YN +I+ +     +++A ++
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              M  K +  T  +Y T+IKGY    +AD+A R+  EM S     N  ++T+++  LC 
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
                   + + EM+ R + P    +   L+   CK G  + A ++    +      +  
Sbjct: 448 HLMFDSALRFVGEMLLRNMSP-GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
               L+   C+A   D A +     ++KEI+ R      M+  SYN +I   C   +  +
Sbjct: 507 TSNALLHGLCEAGKLDEAFR-----IQKEILGR---GCVMDRVSYNTLISGCCGKKKLDE 558

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A +F  +++K+G+  D   ++ LI G       + A +      R G+  D   Y  +I+
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
              +     + +   D M+     P + ++  ++ +    GR+  A  + + M  KG+  
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           N      +++ + +   VEEA    + M   G  PN   + +L+    + G+ +    LL
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                ++   +  +Y  ++      G    A  +L ++ EKG V D  +  + I G  ++
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798

Query: 635 GNTKQA 640
           G   +A
Sbjct: 799 GGVLEA 804



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 217/484 (44%), Gaps = 12/484 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +++ L R  ++  A  +L +M KKG   +  ++  LI+S+ + G + ++++I D+M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+  +  +Y+ L K   + G+   A+R   +MLS G    + ++  ++      L  
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           ++A+RF  +M  R +S       T+I+G  +  K  +A +L+ +   K       +   +
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G     + D+A RI  E+       + V+Y  L+ G C   K+ E    L EMV+R +
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P DN  +  L+        +  A        R  +  +   Y ++I+  CKAE  +   
Sbjct: 572 KP-DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--V 415
           +  D+++ K +  +P + +      YN +I+  C +G+   A +  R+ MK   + P   
Sbjct: 631 EFFDEMMSKNV--QPNTVV------YNHLIRAYCRSGRLSMA-LELREDMKHKGISPNSA 681

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            + +LI+G S     + A  + + M   G+  +   Y  LI+ Y + G+    +  L  M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                 P    +  ++     DG V  ASR++  M EKG+  +     + +   L +G V
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801

Query: 536 EEAL 539
            EA 
Sbjct: 802 LEAF 805



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/518 (22%), Positives = 231/518 (44%), Gaps = 11/518 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A++ F  +E AG+   +  T   +I+ LG  G+ + A      M ++G++     + +
Sbjct: 277 EEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L++   +   + ++  +   M + G   +V  Y+ L    +  G    A    + M+S+G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +  T  TYN ++ G+  + + + A R  ++M S G +++  ++ ++I         D A 
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +   EM  +N+ P     TT+I G     +   AL ++ +  +     +  T  ALL GL
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C+AGK+ E  ++ +E++ R     D   +  L+   C    L+ A   L  M++  +  +
Sbjct: 516 CEAGKLDEAFRIQKEILGRGC-VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y ILI         + AI+  D      ++  P      +  +Y+ MI   C   +T
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGML--P------DVYTYSVMIDGCCKAERT 626

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            + + FF ++M K V  + V +N+LIR + + G    A E+ + M  +G+  ++  Y  L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+         +AK   + M  +G  P    + ++++   + G++     +++ M  K V
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             N      ++      G+V EA   ++ M + G VP+
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 4/319 (1%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           HG K+S+    +F+++ +   F  D  T   ++  L   GKL+ A  I  ++  +G   D
Sbjct: 483 HG-KHSKALELWFQFLNKG--FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
              +  LI     K  + E+    D M + G++    +Y  L   +    +   A ++++
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
                G+ P  +TY+VM+ G   + + E    FF++M S+ +  + V YN +I  Y R  
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           ++  A +L  +MK K I P   +YT++IKG   + R ++A  +F+EM+   ++PN   YT
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           AL+ G    G+MV+V+ +LREM  + + P +   +  ++G   + G++  A+ +L  M  
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHP-NKITYTVMIGGYARDGNVTEASRLLNEMRE 778

Query: 331 LSIPTEAGHYGILIENFCK 349
             I  ++  Y   I  + K
Sbjct: 779 KGIVPDSITYKEFIYGYLK 797



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 4/282 (1%)

Query: 9   RLQNKI---RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           R+Q +I     ++ +  +N + +   G K  + A  F   + + GL   D  T+  +I  
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL-KPDNYTYSILICG 584

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L  + K+  A     D  + G+  D   + V+I+   K    +E  + FD M    V+ +
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
              Y+ L +   R GR  MA      M  +GI P   TY  ++ G  +  ++E A   FE
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+  G+  +V  Y  +I+GY +  +M + E L  EM  KN+ P  I+YT MI GY    
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
              +A R+ +EM+   + P+++TY   + G    G ++E  K
Sbjct: 765 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 201/423 (47%), Gaps = 10/423 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
             +LI  +     V  +  +   + +LG++ ++ ++  L   + + G++  A   F+ M+
Sbjct: 136 LSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMV 195

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           + G  P  +TY  ++ G     +   A    + M+  G   +VVTY+T+I+ + + ++++
Sbjct: 196 ARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVN 255

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  +F+ MK K I P + +Y ++I+G     +  +A  + +EM+S ++ P+ VT+  L+
Sbjct: 256 EALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLV 315

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             +C  GK+ E Q VL+ M E  + P   +    + G   +S  +  A  +  AMI    
Sbjct: 316 DTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRS-EVVEARKLFDAMITKGC 374

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y ILI  +CK +  D A +L ++++ +   L P +       SYN +I  LC  
Sbjct: 375 KPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG--LTPNNV------SYNTLIHGLCQL 426

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G   +A   F+ +   G L +   ++ L+ G  K+G    AF + + M       +   Y
Sbjct: 427 GSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMY 486

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI++  + G   DA+     +   G  P + ++ +++  L ++G +  A    ++M E
Sbjct: 487 NILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEE 546

Query: 513 KGV 515
            G 
Sbjct: 547 DGC 549



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 191/427 (44%), Gaps = 47/427 (11%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L ++G+   A  +L  M + G Q +   +  +I+S+ K   V E++ IF
Sbjct: 202 DVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIF 261

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             MK  G+   + +Y++L + +    ++  A    N+M S  I P   T+NV++      
Sbjct: 262 SYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKE 321

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K+  A    + M   G+  DVVTY++++ GY+   ++ EA KLF  M  K  +P V SY
Sbjct: 322 GKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSY 381

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I GY  V+R D+A ++F+EM    + PN V+Y  L+ GLC  G + E + + + M  
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNM-- 439

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
                                 H N     L              Y IL++ FCK   + 
Sbjct: 440 ----------------------HTNGNLPNLFT------------YSILLDGFCKQGYFG 465

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
           +A +L   +  +    +P   +      YN +I  +C +G    A   F +L  KG L P
Sbjct: 466 KAFRLFRAM--QSTYSKPNLVM------YNILIDAMCKSGNLRDARKLFSELFVKG-LQP 516

Query: 415 VA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
            A  +  +I G  KEG  D A E  + M   G P D  +Y  +I  +L   + + A   +
Sbjct: 517 NAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLI 576

Query: 473 DSMIEDG 479
             M + G
Sbjct: 577 GEMRDKG 583



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/504 (21%), Positives = 226/504 (44%), Gaps = 15/504 (2%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFF-LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           FN ML     P    +  +L     +    +T I   + M+  G+S ++ T + +IN ++
Sbjct: 85  FNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFS 144

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
             +++D A  + A++ +  ++PT++++TT+I     V +   A+ +FD+M +   +P+  
Sbjct: 145 HLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVY 204

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           TYT ++ GLC  G+      +L++M E    P +   +  ++    K   +N A D+   
Sbjct: 205 TYTTIINGLCKIGETAAAAGLLKKMEEAGCQP-NVVTYSTIIDSHRKDRRVNEALDIFSY 263

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M    I  +   Y  LI+  C    +  A  LL+++  + + + P      +  ++N ++
Sbjct: 264 MKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM--RSLNIMP------DIVTFNVLV 315

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             +C  G+  +A+   + + + GV  D V +++L+ G+S       A ++   M  +G  
Sbjct: 316 DTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCK 375

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D  +Y  LI  Y +     +AK   + MI  G +P +  + +++  L + G ++ A  +
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNL 435

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
            K+M   G   NL   + +L+    +G+  +A      M  + S PN   ++ L+  + +
Sbjct: 436 FKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCK 495

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G    A KL      +    +   Y  +++ L   G    A      + E G   D  S
Sbjct: 496 SGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEIS 555

Query: 624 SDKLIAG-LNQEGNTKQADILSRM 646
            + +I G L+ +  ++   ++  M
Sbjct: 556 YNVIIRGFLHHKDESRAVQLIGEM 579



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/466 (21%), Positives = 195/466 (41%), Gaps = 46/466 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLS-EGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
            +  +  L   I++ G+Y        K +   G+ P  +T ++++  F    +++ A   
Sbjct: 96  CIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSV 155

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
              +   G+   +VT+ T+IN   +  K  +A +LF +M  +   P V +YTT+I G   
Sbjct: 156 LAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCK 215

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYT--------------------------------- 270
           +     A  +  +M+    +PN VTY+                                 
Sbjct: 216 IGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFT 275

Query: 271 --ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
             +L+ GLC+  +  E   +L EM    I P D   F  L+   CK G ++ A  VLK M
Sbjct: 276 YNSLIQGLCNFSQWKEASALLNEMRSLNIMP-DIVTFNVLVDTICKEGKVSEAQGVLKTM 334

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
             + +  +   Y  L+  +        A KL D ++ K    +P      +  SYN +I 
Sbjct: 335 TEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGC--KP------DVFSYNILIN 386

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
             C   +  +A+  F +++ +G+  + V++N LI G  + G+   A  + K M   G   
Sbjct: 387 GYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLP 446

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +   Y  L++ + ++G    A     +M      P   ++  +++++ + G ++ A ++ 
Sbjct: 447 NLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLF 506

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             +  KG++ N  +   I+  L   G ++EAL     M + G  P+
Sbjct: 507 SELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 36/213 (16%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N++ N     K  + A Q F  +   GL   +  ++  +I  L ++G L  AR +  
Sbjct: 379 FSYNILINGYCKVKRIDEAKQLFNEMIHQGL-TPNNVSYNTLIHGLCQLGSLREARNLFK 437

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G   +   + +L++ + K+G   ++ ++F  M+    + ++  Y+ L   + + G
Sbjct: 438 NMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSG 497

Query: 141 RYMMAKRYFNKMLSEGIEPTRH-----------------------------------TYN 165
               A++ F+++  +G++P                                      +YN
Sbjct: 498 NLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYN 557

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           V++ GF        A++   +M+ +G   DV T
Sbjct: 558 VIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score = 42.7 bits (99), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 4/198 (2%)

Query: 455 LIESYLRKGEPADAKTALDSMIE-DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           L+ + ++ G+  D   +L   +E  G SP       ++       RV  A  V+  +++ 
Sbjct: 103 LLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKL 162

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G++  +     ++  L   G   +A+   D M+  G  P+   + ++++ L + G+T AA
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAA 222

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             LL       C  ++ +Y  ++D+     +   A  I   +  KG   D  + + LI G
Sbjct: 223 AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQG 282

Query: 631 LNQEGNTKQADILSRMIR 648
           L      K+A  L   +R
Sbjct: 283 LCNFSQWKEASALLNEMR 300


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 140/606 (23%), Positives = 270/606 (44%), Gaps = 15/606 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL  F  +   G+F      ++ ++  L R  +     C   D+  KGV  D  +F   I
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNI-LLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAI 280

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            ++ K G V+E+VK+F  M++ GV  +V +++ +   +   GRY  A  +  KM+  G+E
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT  TY++++ G   + ++  A    ++M  +G   +V+ YN +I+ +     +++A ++
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 400

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              M  K +  T  +Y T+IKGY    +AD+A R+  EM S     N  ++T+++  LC 
Sbjct: 401 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 460

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
                   + + EM+ R + P    +   L+   CK G  + A ++    +      +  
Sbjct: 461 HLMFDSALRFVGEMLLRNMSP-GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 519

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
               L+   C+A   D A +     ++KEI+ R      M+  SYN +I   C   +  +
Sbjct: 520 TSNALLHGLCEAGKLDEAFR-----IQKEILGR---GCVMDRVSYNTLISGCCGKKKLDE 571

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A +F  +++K+G+  D   ++ LI G       + A +      R G+  D   Y  +I+
Sbjct: 572 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 631

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
              +     + +   D M+     P + ++  ++ +    GR+  A  + + M  KG+  
Sbjct: 632 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 691

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           N      +++ + +   VEEA    + M   G  PN   + +L+    + G+ +    LL
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                ++   +  +Y  ++      G    A  +L ++ EKG V D  +  + I G  ++
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 811

Query: 635 GNTKQA 640
           G   +A
Sbjct: 812 GGVLEA 817



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 217/484 (44%), Gaps = 12/484 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +++ L R  ++  A  +L +M KKG   +  ++  LI+S+ + G + ++++I D+M
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+  +  +Y+ L K   + G+   A+R   +MLS G    + ++  ++      L  
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           ++A+RF  +M  R +S       T+I+G  +  K  +A +L+ +   K       +   +
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G     + D+A RI  E+       + V+Y  L+ G C   K+ E    L EMV+R +
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P DN  +  L+        +  A        R  +  +   Y ++I+  CKAE  +   
Sbjct: 585 KP-DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 643

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--V 415
           +  D+++ K +  +P + +      YN +I+  C +G+   A +  R+ MK   + P   
Sbjct: 644 EFFDEMMSKNV--QPNTVV------YNHLIRAYCRSGRLSMA-LELREDMKHKGISPNSA 694

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            + +LI+G S     + A  + + M   G+  +   Y  LI+ Y + G+    +  L  M
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 754

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                 P    +  ++     DG V  ASR++  M EKG+  +     + +   L +G V
Sbjct: 755 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 814

Query: 536 EEAL 539
            EA 
Sbjct: 815 LEAF 818



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/518 (22%), Positives = 231/518 (44%), Gaps = 11/518 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A++ F  +E AG+   +  T   +I+ LG  G+ + A      M ++G++     + +
Sbjct: 290 EEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L++   +   + ++  +   M + G   +V  Y+ L    +  G    A    + M+S+G
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +  T  TYN ++ G+  + + + A R  ++M S G +++  ++ ++I         D A 
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +   EM  +N+ P     TT+I G     +   AL ++ +  +     +  T  ALL GL
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C+AGK+ E  ++ +E++ R     D   +  L+   C    L+ A   L  M++  +  +
Sbjct: 529 CEAGKLDEAFRIQKEILGRGC-VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 587

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y ILI         + AI+  D      ++  P      +  +Y+ MI   C   +T
Sbjct: 588 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGML--P------DVYTYSVMIDGCCKAERT 639

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            + + FF ++M K V  + V +N+LIR + + G    A E+ + M  +G+  ++  Y  L
Sbjct: 640 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+         +AK   + M  +G  P    + ++++   + G++     +++ M  K V
Sbjct: 700 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 759

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             N      ++      G+V EA   ++ M + G VP+
Sbjct: 760 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 797



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 4/319 (1%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           HG K+S+    +F+++ +   F  D  T   ++  L   GKL+ A  I  ++  +G   D
Sbjct: 496 HG-KHSKALELWFQFLNKG--FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
              +  LI     K  + E+    D M + G++    +Y  L   +    +   A ++++
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 612

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
                G+ P  +TY+VM+ G   + + E    FF++M S+ +  + V YN +I  Y R  
Sbjct: 613 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           ++  A +L  +MK K I P   +YT++IKG   + R ++A  +F+EM+   ++PN   YT
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           AL+ G    G+MV+V+ +LREM  + + P +   +  ++G   + G++  A+ +L  M  
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHP-NKITYTVMIGGYARDGNVTEASRLLNEMRE 791

Query: 331 LSIPTEAGHYGILIENFCK 349
             I  ++  Y   I  + K
Sbjct: 792 KGIVPDSITYKEFIYGYLK 810



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 4/282 (1%)

Query: 9   RLQNKIR---ALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           R+Q +I     ++ +  +N + +   G K  + A  F   + + GL   D  T+  +I  
Sbjct: 539 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL-KPDNYTYSILICG 597

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L  + K+  A     D  + G+  D   + V+I+   K    +E  + FD M    V+ +
Sbjct: 598 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
              Y+ L +   R GR  MA      M  +GI P   TY  ++ G  +  ++E A   FE
Sbjct: 658 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 717

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+  G+  +V  Y  +I+GY +  +M + E L  EM  KN+ P  I+YT MI GY    
Sbjct: 718 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 777

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
              +A R+ +EM+   + P+++TY   + G    G ++E  K
Sbjct: 778 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 218/449 (48%), Gaps = 10/449 (2%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           ++G +  A  +  D+   G Q +  ++ VL+ S  K+G V E++++   M+   ++  + 
Sbjct: 303 QMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLV 362

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y  L   + ++G+   A + + +M    I P    ++ +L G      L  A  +F+ +
Sbjct: 363 TYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL 422

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
               +  DV  YN MI+GY +   ++EA +L+  +++K I P+++++ ++I G+    + 
Sbjct: 423 IMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKV 482

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            +A R+ + +K   ++P+AVTYT L+   C+ G + ++ ++L EM  + I P   +  + 
Sbjct: 483 VEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVV 542

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           + G+ CK   L  +  +L+ M    +  +   Y  +I+ FCKA+   +A +LLD ++   
Sbjct: 543 IKGL-CKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHN 601

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
           +   P        ++YN +I  LC  G    A+     L  + + L  VA+  +I+ H  
Sbjct: 602 LEPTP--------ATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCV 653

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           +G+   A ++   M  +G       Y  +I    ++    +AK     M+ DG SP   +
Sbjct: 654 KGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEI 713

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           F  ++ +    G V +   ++  M++ G+
Sbjct: 714 FEMMLNAFHRAGHVHSVFELLAVMIKFGL 742



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 246/529 (46%), Gaps = 16/529 (3%)

Query: 27  YNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           YN+L HG   A + E AL+    +E+ GL   D  T+  + +    +G ++ AR I+  M
Sbjct: 223 YNILIHGLIVAGSMEEALELTNDMEKQGL-QPDMVTYKIVAKGFHLLGLMSGAREIIQKM 281

Query: 83  -PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
              +G++ D   + VLI  + + G ++E++++   +   G + +V  Y  L   + +RG+
Sbjct: 282 LTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQ 341

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A +   +M +  ++P   TY++++ G     K++ AI+ +++M    I  +   ++ 
Sbjct: 342 VDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSG 401

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++ G      + +A   F  +   N+ P V  Y  MI GYV +   ++A+R++  ++   
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P+ VT+ +L+ G C   K+VE +++L  +    + P   + +  L+   C+ G++N  
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVT-YTTLMNAYCEEGNINKL 520

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            ++L  M    I      Y ++I+  CK    + +++LL+ +  K   L P         
Sbjct: 521 HELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG--LAPDQI------ 572

Query: 382 SYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +IQ  C      KA E+    L+      P  +N LI G  + G+ + A  ++  +
Sbjct: 573 TYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSL 632

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             R +     AY  +I+++  KG+   A      M+E G   +   + +V+  L +   +
Sbjct: 633 QDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLI 692

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
             A      M+  GV  + ++   +L A    GHV      + +M++ G
Sbjct: 693 NEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFG 741



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 122/625 (19%), Positives = 259/625 (41%), Gaps = 67/625 (10%)

Query: 32  GAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE 91
             +N++    F+        F H R +   +  +L R  +    R +L  M ++ V    
Sbjct: 39  SVQNADFVADFYHLSRNEFGFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEEV---- 94

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
                         +V +++ +   MK+  +  S+++Y++L    LR    M     +N 
Sbjct: 95  -----------ASRMVHDALFVLVKMKEQNLRPSIQTYNSLL-YNLRHTDIMWD--VYND 140

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           +   G   +  T ++++ G     +   A+ F      +  +  VV++NT+++ Y +   
Sbjct: 141 IKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGL 200

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM-------------- 257
            D A+  F  M +  I P   SY  +I G +     ++AL + ++M              
Sbjct: 201 ADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKI 260

Query: 258 --KSFD--------------------VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
             K F                     +KP+ VTYT L+ G C  G + E  ++ R+++  
Sbjct: 261 VAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSS 320

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
                +  ++  LL   CK G ++ A  +L  M   ++  +   Y ILI   CK     +
Sbjct: 321 GFQL-NVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQ 379

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           AI+L  ++    I   P S       +++ +++ LC  G    A ++F  L+   +  D 
Sbjct: 380 AIQLYKEMCFNRIF--PNSF------AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDV 431

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             +N +I G+ K G+ + A  + K +  + +      +  LI  + +  +  +A+  L+S
Sbjct: 432 TLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLES 491

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           +   G  P++  + ++M +  E+G +     ++  M  K ++  +     +++ L  +  
Sbjct: 492 IKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRK 551

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +EE++  ++ M   G  P+   +++++    +      A +LLD  L  +     A+Y  
Sbjct: 552 LEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNV 611

Query: 592 VLDALLAAGKTLNAYSILFKIMEKG 616
           ++D L   G   +A  +L  + ++ 
Sbjct: 612 LIDGLCRYGDVEDADRVLVSLQDRN 636


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 226/491 (46%), Gaps = 11/491 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F  N+V + L        A   F  ++  G  + D  T+  +I+  G+ G+L     ++ 
Sbjct: 200 FTFNIVIDFLCKQGELVEARALFVRMKAMGC-SPDVVTYNSLIDGYGKCGELEEVELLVS 258

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M K G   D   +  LI  + K G ++++   F  MK+LGV  +V +         + G
Sbjct: 259 EMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEG 318

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A + F +M   G+ P   TY  ++ G   + +L+ AI   ++M  +G+  +VVTY 
Sbjct: 319 LVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYT 378

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            M++G  +  K+  A+ + + M+   ++   + YTT+I G+   + ++ AL + +EMK+ 
Sbjct: 379 VMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNK 438

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            ++ +   Y  L+ GLC   K+ E + +L +M +  + P +  ++  ++    K+G  + 
Sbjct: 439 GMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRP-NTVIYTTIMDAFFKAGKESE 497

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +L  +    +      Y  LI+  CKA     AI   DK+  +E+ L P   +    
Sbjct: 498 AVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKM--RELGLDPNVQV---- 551

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
             Y  +I   C  G   KA     +++ KG+ LD V + +LI GH K+G+   AF +   
Sbjct: 552 --YTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAK 609

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G+  D   Y C I  +       +A+  L  MI  G +P  + +  ++    + G 
Sbjct: 610 MIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGN 669

Query: 500 VQTASRVMKSM 510
           ++ AS +   M
Sbjct: 670 MEEASSLQNEM 680



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/560 (21%), Positives = 244/560 (43%), Gaps = 53/560 (9%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F+ L+      G++ ++V+    ++QL V  + ++ + +   + R  +  + +R F  +
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            +    P   T+N+++       +L  A   F  MK+ G S DVVTYN++I+GY +  ++
Sbjct: 195 PA----PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +E E L +EM++      V++Y  +I  +      + A   F EMK   V  N VT +  
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF 310

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +   C  G + E  K+  +M  R + P + + +  L+   CK+G L+ A  +L  M+   
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFT-YTSLVDGTCKAGRLDDAIVLLDEMVHQG 369

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y ++++  CK                                           
Sbjct: 370 LVPNVVTYTVMVDGLCK------------------------------------------- 386

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+   A+     + + GV  + + +  LI GH    N + A +++  M  +G+  D   
Sbjct: 387 EGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSL 446

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI    +  +  +AK+ L  M + G  P + ++ ++M++ F+ G+   A  ++  + 
Sbjct: 447 YGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIP 506

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           + G++ N+     +++ L   G + EA+   D M + G  PN   + +L+    + G   
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLS 566

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            AV L++  + +   +D   Y  ++D  +  G    A+++  K++E G   D       I
Sbjct: 567 KAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFI 626

Query: 629 AGLNQEGNTKQA-DILSRMI 647
           +G       ++A  +LS MI
Sbjct: 627 SGFCNMNMMQEARGVLSEMI 646



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 213/462 (46%), Gaps = 12/462 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F ++I+   K+G + E+  +F  MK +G    V +Y++L     + G     +   ++M 
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G      TYN ++  F     +E A  +F +MK  G+  +VVT +T ++ + +   + 
Sbjct: 262 KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVR 321

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA KLFA+M+ + + P   +YT+++ G     R DDA+ + DEM    + PN VTYT ++
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC  GK+     VL  ++ER     +  ++  L+     + +   A D+L  M    +
Sbjct: 382 DGLCKEGKVAVADDVL-SLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGM 440

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   YG LI   CK +  D A  LL K+   +  LRP + +      Y  ++      
Sbjct: 441 ELDVSLYGTLIWGLCKVQKLDEAKSLLHKM--DDCGLRPNTVI------YTTIMDAFFKA 492

Query: 394 GQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           G+  +A     ++   G L P  V +  LI G  K G+   A      M   G+  +   
Sbjct: 493 GKESEAVALLHKIPDSG-LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQV 551

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+ + + G  + A   ++ M++ G S    ++ S+++   + G +Q A  +   M+
Sbjct: 552 YTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMI 611

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           E G++ +L      +        ++EA G +  M+ +G  P+
Sbjct: 612 ETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPD 653



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 91/192 (47%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + GK + A  +L  +P  G+Q +   +  LI+   K G + E++  FD M++LG++ +V+
Sbjct: 491 KAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQ 550

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
            Y  L     + G    A    N+M+ +G+   +  Y  ++ G      L+ A      M
Sbjct: 551 VYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
              G+ LD+  Y   I+G+     M EA  + +EM    I P   +Y  +I+ Y  +   
Sbjct: 611 IETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNM 670

Query: 248 DDALRIFDEMKS 259
           ++A  + +EM+S
Sbjct: 671 EEASSLQNEMES 682


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 136/544 (25%), Positives = 257/544 (47%), Gaps = 32/544 (5%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           L   V+  A NS+ +LQ  +    +G+++        + E+   +G    AR +L     
Sbjct: 73  LAMAVISHAPNSKPSLQLLKETINSGVYS--------IREVFNELGV---ARGVL----- 116

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            G++    ++++LI +  +     ++ + FD+MK  GV   V + + +  L L+  R   
Sbjct: 117 -GIK-TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEK 174

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   + +M    I+ +  T+N+M+       KL+ A  F   M++ GI  +VVTYNT+I+
Sbjct: 175 AWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIH 234

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           GY    +++ A  +F  MK + ++P   +Y + I G     + ++A  + ++MK   ++P
Sbjct: 235 GYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRP 294

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL--LGVQCKSGHLNAAA 322
            AVTY  L+ G C+ G +        +MV   + P  ++  M +  L + CK   ++ A 
Sbjct: 295 TAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK---MDEAD 351

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            ++K M    +  ++  Y ILI  +C+     +A  L D+++ K I  +P         +
Sbjct: 352 GIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGI--QPTRV------T 403

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  +I  L   G+  +A+  F ++++KG+  D + FN LI GH   GN D AF ++K M 
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           +  V  D   +  L++   R+G+   A+  ++ M   G  P    + +++    + G ++
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
            A RV   M+  G    L     +++ L      + A   +  M+  G  PN ++ LS++
Sbjct: 524 DAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583

Query: 562 SEKG 565
              G
Sbjct: 584 EGIG 587



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 208/418 (49%), Gaps = 25/418 (5%)

Query: 2   AERAWTTR---LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRET 58
            E+AW       + +I++ V  F  N++ NVL      + A +F   +E  G+   +  T
Sbjct: 172 TEKAWVLYAEMFRMRIKSSVVTF--NIMINVLCKEGKLKKAKEFIGLMEALGI-KPNVVT 228

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I      G++  AR I   M  +GV+ D   +   I    K+G ++E+  + + MK
Sbjct: 229 YNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMK 288

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           ++G+  +  +Y+ L      +G   MA  Y +KM+ EG+ PT  TYN+++   FL  K++
Sbjct: 289 EIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMD 348

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A    ++M  +G+  D VTYN +INGY R   + +A  L  EM  K I+PT ++YT++I
Sbjct: 349 EADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLI 408

Query: 239 KGYVAVER-----ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
             YV  +R     ADD   +F+++    + P+ + + AL+ G C  G M     +L+EM 
Sbjct: 409 --YVLSKRGRMKQADD---LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +  + P D   F  L+  +C+ G + AA ++++ M    I  +   Y  LI  + K    
Sbjct: 464 QMKVVP-DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDM 522

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             A ++ D+++   I   P         +YN +IQ LC N +   AE   ++++ KG+
Sbjct: 523 KDAFRVRDEML--SIGFNPT------LLTYNALIQGLCKNEEGDHAEQLLKEMISKGI 572



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 211/457 (46%), Gaps = 16/457 (3%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           V Y+ +I      K+ D+A + F  MK K + P V +   M+  ++   R + A  ++ E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    +K + VT+  ++  LC  GK+ + ++ +  M    I P +   +  ++   C  G
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKP-NVVTYNTIIHGYCSRG 240

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            +  A  +   M    +  ++  YG  I   CK    + A  +L+K+  KEI LRP    
Sbjct: 241 RVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM--KEIGLRPT--- 295

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFE 435
              A +YN +I   C+ G    A  +  +++++G++  V+ +N LI     +   D A  
Sbjct: 296 ---AVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADG 352

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           I+K M  +G+  D+  Y  LI  Y R G    A T  D MI  G  P    + S++  L 
Sbjct: 353 IIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLS 412

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           + GR++ A  + + +V KG+  +L +   +++     G+++ A   +  M Q   VP+  
Sbjct: 413 KRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEV 472

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F++L+     +GK  AA +L++    R    D  SY  ++      G   +A+ +  ++
Sbjct: 473 TFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 532

Query: 613 MEKGGVTDWKSSDKLIAGL--NQEGNTKQADILSRMI 647
           +  G      + + LI GL  N+EG+  +  +L  MI
Sbjct: 533 LSIGFNPTLLTYNALIQGLCKNEEGDHAE-QLLKEMI 568



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 2/232 (0%)

Query: 15  RALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + LVP    +N++ N      N + A      +   G+    R T+  +I +L + G++ 
Sbjct: 360 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGI-QPTRVTYTSLIYVLSKRGRMK 418

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +   + +KG+  D  MF  LI+ +   G +  +  +   M Q+ V     +++ L 
Sbjct: 419 QADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLM 478

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           +   R G+   A+    +M S GI+P   +YN ++ G+     ++ A R  ++M S G +
Sbjct: 479 QGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFN 538

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
             ++TYN +I G  + ++ D AE+L  EM  K I P   +Y ++I+G   VE
Sbjct: 539 PTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNVE 590


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 226/489 (46%), Gaps = 16/489 (3%)

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
           G VGK   A  +  ++   GV      + VLI+    +G+  E+ K+   M + G+  S 
Sbjct: 305 GEVGK---ALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPST 361

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
             ++ + K +LR  R+  A      ++  G+ P   TY  ++       KL  A+  ++ 
Sbjct: 362 YEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDK 420

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           MK  G+   +VTY++++ GY    +MDEA KL++EM +K   P  ++YTT++KGY+  + 
Sbjct: 421 MKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKA 480

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL-REMVERYIPPKDNSVF 305
            D+A  + +EM+   V     TY  L+ GL    ++ EV ++L R + E ++P      +
Sbjct: 481 FDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVP--TTMTY 538

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             ++    K+G + +A  + + M +  I      Y   I+ +C+    D A+KLL     
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL----- 593

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
             I +R +  +  + ++YN  I   C  G   +A  F   L+K G+  D   +N+ + G+
Sbjct: 594 --IYVR-RDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY 650

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
                   A +    M ++ V  D + Y  LI+ + + G  A A      M+ +   P  
Sbjct: 651 KNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDD 710

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             F ++   L   G +  A R++  M    V  N+     ++ A +  G ++EA    D 
Sbjct: 711 KTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDE 770

Query: 545 MMQSGSVPN 553
           M+ SG VP+
Sbjct: 771 MLSSGVVPD 779



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 149/660 (22%), Positives = 277/660 (41%), Gaps = 85/660 (12%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           + R V R  + +    T L +   LG       A  +  +M  KG   D  M++V+I + 
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALG--ASAADALTLFDEMRGKGCYADAKMYDVVIRAC 195

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
            + G+  ++V++FD M   GV+   + Y      + +      A +   KM   G EP  
Sbjct: 196 VRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWE 255

Query: 162 HTYN------------------------------------VMLWGFFLSLKLETAIRFFE 185
            TY+                                    +++ G+ L+ ++  A+  F+
Sbjct: 256 LTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFD 315

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           ++ S G++   VTY  +I G +     DE  KL  +M E+ + P+   +  +IKG +  +
Sbjct: 316 EVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDK 375

Query: 246 RADDAL----------------------------------RIFDEMKSFDVKPNAVTYTA 271
           R  DA+                                   ++D+MK   VKP+ VTY +
Sbjct: 376 RWKDAIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHS 435

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           LL G C+ G+M E  K+  EM ++  PP + +    + G   K    NA A +L  M + 
Sbjct: 436 LLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYA-LLNEMRQN 494

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            +      Y ILI             ++L + + +  +  P +       +YN +I    
Sbjct: 495 GVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFV--PTTM------TYNSIINGFV 546

Query: 392 HNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G  G A   +RQ+ KKG+  + V + + I G+ +    D A +++  + R G+  D  
Sbjct: 547 KAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIA 606

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           AY   I+++ ++G  + A   L  +++DG +P  +++ S +        +  AS+   SM
Sbjct: 607 AYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSM 666

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
           +++ V  + ++   +++     G+V  AL     MM +  +P+   F +L   L   G  
Sbjct: 667 IKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDI 726

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A +LLD     D   ++ +Y  +++A +  GK   A+ +  +++  G V D  + D L
Sbjct: 727 DGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 125/567 (22%), Positives = 245/567 (43%), Gaps = 21/567 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  +GV  D      L+ +        +++ +FD M+  G     K YD + +  +R G 
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A R F++M   G++P    Y + + G       + A++    M+  G     +TY++
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260

Query: 202 MINGYNRFKKMDEAEKLFAEM---KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           +++   + ++MDEA +L  +M     K ++  V+  T ++ GY        AL +FDE+ 
Sbjct: 261 VVDVLVKVRRMDEALRLKDQMLLATGKKMD--VVLATMLMHGYCLNGEVGKALDLFDEVV 318

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           S  V P  VTY  L+ G CDA  M  E  K+ R+M+E+ + P      + + G+  +   
Sbjct: 319 SDGVTPTNVTYGVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGL-LRDKR 376

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
              A  +LK ++   +P +   YG LI   CK +    A+ L DK+  KE  ++P     
Sbjct: 377 WKDAIGLLKLVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKM--KEAGVKPSIV-- 431

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
               +Y+ ++   C  G+  +A   + ++  KG   + V +  L++G+ K+   D+A+ +
Sbjct: 432 ----TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYAL 487

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +  M + GV      Y  LI          +    L   + +G  P +  + S++    +
Sbjct: 488 LNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVK 547

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G + +A  + + M +KG+  N+      ++        + A+  +  + + G  P+   
Sbjct: 548 AGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAA 607

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +++ +    ++G    A+  L   L      D+  Y   +           A    + ++
Sbjct: 608 YNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMI 667

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++  V D +    LI G ++ GN   A
Sbjct: 668 KQRVVADTEIYTTLIDGFSKVGNVAFA 694



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 219/514 (42%), Gaps = 34/514 (6%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           +++M++ G+ P   +   +L    L      A+  F++M+ +G   D   Y+ +I    R
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
                +A +LF EM    ++P    Y   I G   +  AD AL++  +M+    +P  +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y++++  L    +M E  ++  +M+       D  +   L+   C +G +  A D+   +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 329 IRLSIPTEAGHYGILIENFCKAE-MYDRAIKLLDKLVEKEI-------------ILRPQS 374
           +   +      YG+LI+  C AE M D   KL  +++E+ +             +LR + 
Sbjct: 318 VSDGVTPTNVTYGVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKR 376

Query: 375 TLDM-------------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNL 420
             D              +  +Y  +I  LC + +  +A   + ++ + GV    V +++L
Sbjct: 377 WKDAIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G+ ++G  D A ++   M  +G P +   Y  L++ Y++K    +A   L+ M ++G 
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           S     +  ++  L+   RV     ++K  + +G          I+   +  G +  A G
Sbjct: 497 SCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFG 556

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIA---AVKLLDFCLGRDCI-IDLASYEKVLDAL 596
               M + G  PN  +  S +    +T     AVKLL + + RD I  D+A+Y   +D  
Sbjct: 557 MYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY-VRRDGIQPDIAAYNAFIDTF 615

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
              G    A   L  +++ G   D    +  + G
Sbjct: 616 CKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/441 (22%), Positives = 196/441 (44%), Gaps = 15/441 (3%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + L+P  ++ NLV   L   K  + A+   + V   G+   D  T+  +I  L +  KL+
Sbjct: 355 QGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV--PDVFTYGCLIHWLCKHQKLH 412

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +   M + GV+     +  L+  Y +KG + E++K++  M   G   +  +Y  L 
Sbjct: 413 EAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLM 472

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           K  +++  +  A    N+M   G+    +TYN+++ G ++  ++       +   S G  
Sbjct: 473 KGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFV 532

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
              +TYN++ING+ +   M  A  ++ +M++K I P +++YT+ I GY      D A+++
Sbjct: 533 PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKL 592

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
              ++   ++P+   Y A +   C  G M      L  +++  + P D +V+   +    
Sbjct: 593 LIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTP-DVTVYNSFVTGYK 651

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
               +  A+    +MI+  +  +   Y  LI+ F K      A++L  +++   +I    
Sbjct: 652 NLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVI---- 707

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPD 431
                +  ++  +   LC +G    A+      M++  + P  V +N LI    ++G   
Sbjct: 708 ----PDDKTFTALTHGLCRSGDIDGAKRLLDD-MRRLDVSPNIVTYNMLINACVRDGKLQ 762

Query: 432 SAFEIVKIMGRRGVPRDADAY 452
            AF++   M   GV  D   Y
Sbjct: 763 EAFQLHDEMLSSGVVPDDTTY 783


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 137/640 (21%), Positives = 285/640 (44%), Gaps = 13/640 (2%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHA--LQFFRWVERAGLFNHDRETHLKM 62
           +W+ +L+ ++R L+     + V  VL      +     +FFRW +R   + H  E   +M
Sbjct: 73  SWSAKLEAQLRHLLRAMTPSQVRAVLRAQAQRDARAAFEFFRWADRQWKYRHAPEVFDEM 132

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           + +L R    + AR ++  M ++G+      F  L+ SY + G ++ ++++  +M++ G 
Sbjct: 133 LVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGC 192

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
              +   +    +++  GR   A  +  +M   G++P   TYN ++ G   + ++  A+ 
Sbjct: 193 APDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALE 252

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
               M   G   D ++Y T+++   + K++ + + L   M +  I P  ++Y  +I G  
Sbjct: 253 MISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLA 312

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
               AD+AL    E +    + + V Y+A +   C  G+M E ++++ EM+ +   P D 
Sbjct: 313 KHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRP-DV 371

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +  ++   C+ G L+ A  ++K M +         +  L+   CK      A +LL+K
Sbjct: 372 VTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNK 431

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
              +E    P       A +Y+ ++      G+  ++     Q+++KG     V  N LI
Sbjct: 432 --SEEEWWTPS------AITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLI 483

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
                E  P  A + ++    +G   +   +  +I  + R+G+   A + LD M      
Sbjct: 484 HALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRH 543

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P    +  V+++L   G+++ A+ +++ M+ +G+         ++     +G VE+ L  
Sbjct: 544 PDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNL 603

Query: 542 IDLMM-QSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           +D M+ + G    ++ ++  L   GK   A  LL   L      D  +   ++D+ L  G
Sbjct: 604 LDKMLAKEGFSSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRG 663

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             L +Y++  ++ ++  + D K   K+ + L   G  + A
Sbjct: 664 LPLQSYNVACRMFQRNLIPDLKLCQKVDSQLALAGEKQAA 703


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 240/535 (44%), Gaps = 46/535 (8%)

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTYNVMLWGFFLSL 175
           +LG    V SY  L K +  +G+   A     +M++EG     P    YN ++ GFF   
Sbjct: 178 ELGCVPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVCSPNVVAYNTVIDGFFKEG 236

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
            +  A   F++M  RGI  D+VTYN++++   + + MD+AE    +M  K + P   +Y 
Sbjct: 237 DVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 296

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I GY +  +  +A+R+F EM+   + P+ VT + L+  LC  GK+ E + V   M  +
Sbjct: 297 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 356

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P   S  + L G   K G L    D+   M+   I  +   + +LI+ +    M D+
Sbjct: 357 GQNPDVFSYNIMLNGYATK-GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDK 415

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A+ + +++ +  +  +P      +  +Y  +I  LC  G+   A   F Q++ +GV  D 
Sbjct: 416 AMIIFNEMRDHGV--KP------DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 467

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
            A+N LI+G    G+   A E++  +   G+  D   +  +I +  + G   DA+   D 
Sbjct: 468 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 527

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
            +  G  P + ++  +M+     G+++ A RV  +MV  G++ N+     ++      G 
Sbjct: 528 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 587

Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           ++E L     M+Q G  P+     ++L                           Y  ++D
Sbjct: 588 IDEGLSLFREMLQRGIKPS-----TIL---------------------------YSIIID 615

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
            L  AG+T+ A     ++ E G   D  + + ++ GL +     +A  L + +R 
Sbjct: 616 GLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 670



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/473 (22%), Positives = 215/473 (45%), Gaps = 12/473 (2%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           GK   A  +L  M + G     ++  +  +I+ + K+G V ++  +F  M Q G+   + 
Sbjct: 199 GKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV 258

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+++   + +      A+ +  +M+++ + P   TYN +++G+  + + + A+R F++M
Sbjct: 259 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 318

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           +   I  DVVT + ++    ++ K+ EA  +F  M  K   P V SY  M+ GY      
Sbjct: 319 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 378

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            D   +FD M    + P+  T+  L+    + G + +   +  EM +  + P D   +  
Sbjct: 379 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP-DVVTYRT 437

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++   C+ G ++ A +    MI   +  +   Y  LI+ FC      +A +L+ +++   
Sbjct: 438 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM--- 494

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
                 + + ++   ++ +I +LC  G+   A+  F   +  G+  D V +N L+ G+  
Sbjct: 495 -----NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 549

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G  + A  +   M   G+  +   Y  L+  Y + G   +  +    M++ G  P++ L
Sbjct: 550 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 609

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           +  +++ LFE GR   A      M E G+  ++     +L  L      +EA+
Sbjct: 610 YSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 662



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 132/592 (22%), Positives = 255/592 (43%), Gaps = 51/592 (8%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V +      +   A   F+ + + G+   D  T+  ++  L +   ++ A   L  M
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDLVTYNSVVHALCKARAMDKAEAFLRQM 283

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K V  +   +  LI  Y   G  +E+V++F  M++  +   V +   L   + + G+ 
Sbjct: 284 VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 343

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F+ M  +G  P   +YN+ML G+     L      F+ M   GI+ D  T+N +
Sbjct: 344 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 403

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  Y     +D+A  +F EM++  ++P V++Y T+I     + + DDA+  F++M    V
Sbjct: 404 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 463

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVE---------------------RYIPPK- 300
            P+   Y  L+ G C  G +++ ++++ E++                      R +  + 
Sbjct: 464 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 523

Query: 301 ------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                       D  V+  L+   C  G +  A  V  AM+   I      YG L+  +C
Sbjct: 524 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 583

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K    D  + L  +++++ I  +P + L      Y+ +I  L   G+T  A++ F ++ +
Sbjct: 584 KIGRIDEGLSLFREMLQRGI--KPSTIL------YSIIIDGLFEAGRTVPAKMKFHEMTE 635

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G+ +D   +N ++RG  K    D A  + K +    V  +      +I+   +     +
Sbjct: 636 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 695

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           AK    S+      P+   +  ++ +L ++G V+ A  +  SM   G + N  L+  ++ 
Sbjct: 696 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 755

Query: 528 ALLMRGHVEEA---LGRIDLMMQSGSVPNFDSLLSV--LSEKGKTIAAVKLL 574
            LL +  +  A   L +ID   ++ S+ +  ++L V   S KG     ++ L
Sbjct: 756 ELLKKNEIVRAGAYLSKID--ERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/449 (22%), Positives = 197/449 (43%), Gaps = 14/449 (3%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF-DE 256
           TY  +++   R  + + A   F ++    +   +I    +++G+   +R D+AL I    
Sbjct: 116 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHR 175

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKS 315
                  P+  +Y+ LL  LCD GK  +   +LR M E       N V +  ++    K 
Sbjct: 176 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 235

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G +N A D+ K M++  IP +   Y  ++   CKA   D+A   L ++V K ++  P + 
Sbjct: 236 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL--PNNW 293

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
                 +YN +I      GQ  +A   F+++ +  +L D V  + L+    K G    A 
Sbjct: 294 ------TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 347

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           ++   M  +G   D  +Y  ++  Y  KG   D     D M+ DG +P    F  ++++ 
Sbjct: 348 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 407

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
              G +  A  +   M + GVK ++     ++ AL   G +++A+ + + M+  G  P+ 
Sbjct: 408 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 467

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++ L+      G  + A +L+   +     +D+  +  +++ L   G+ ++A +I   
Sbjct: 468 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 527

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +  G   D    + L+ G    G  ++A
Sbjct: 528 TVNVGLHPDAVVYNMLMDGYCLVGKMEKA 556


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 140/613 (22%), Positives = 265/613 (43%), Gaps = 18/613 (2%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V + L    N  +ALQ F+++     F H   T+  MIE LGR  +L+    IL  M  +
Sbjct: 43  VAHALRREPNVLYALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIE 102

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG--RYM 143
            +   +D F  ++ SY   G+   ++K+F  +K+ G + +VK Y+ L   +L     ++ 
Sbjct: 103 RIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFH 162

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           M    +  M  EG+EP   TYNV+L     + KL+ A +   +M  RG   D V+Y T++
Sbjct: 163 MIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVV 222

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
                  +++EA ++    +    E  V     +I G     R  +   + DEM    V 
Sbjct: 223 AAMCEDGRVEEAREV---ARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVD 279

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           PN V+Y++++  L D G++     VL +M+ R   P  ++ F  L+      G +     
Sbjct: 280 PNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHT-FSSLMKGYFLGGRVGEGVG 338

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + + M+   +      Y  L+   C +     A+ +  ++ EK+   RP  T      +Y
Sbjct: 339 LWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRM-EKDCFCRPNVT------TY 391

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           + ++      G    A   + +++  GV  + V + +++    K    D A+ ++  M  
Sbjct: 392 STLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMAT 451

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G P     +   I+     G    A   +D M   G  P +  +  +++ LF    ++ 
Sbjct: 452 DGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKE 511

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A  +++ + E+ V+ NL     ++      G  E  L  +  M+ +G  P+    + ++ 
Sbjct: 512 ACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIY 571

Query: 560 VLSEKGKTIAAVKLLD-FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
             S+ GK   A++ LD    G++   D+ ++  +L  +  +     A   L K++ KG  
Sbjct: 572 AYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIF 631

Query: 619 TDWKSSDKLIAGL 631
            +  + D L+ G 
Sbjct: 632 PNIATWDVLVRGF 644



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 130/274 (47%), Gaps = 2/274 (0%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  L+  + K G +Q + ++++ M   GV  +V  Y ++  ++ +   +  A R  + M 
Sbjct: 391 YSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMA 450

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           ++G  PT  T+N  + G     ++  A+R  + M+  G   D  TYN +++G     ++ 
Sbjct: 451 TDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELK 510

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA +L  E++E+ +E  +++Y T++ G+ +  + +  L++   M    VKP+A+T   ++
Sbjct: 511 EACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVI 570

Query: 274 PGLCDAGKM-VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
                 GK+   +Q + R    + + P D      LL   C S  +  A   L  M+   
Sbjct: 571 YAYSKLGKVRTAIQFLDRITAGKELCP-DIIAHTSLLWGICNSLGIEEAIVYLNKMLNKG 629

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
           I      + +L+  F K   +   I++LD ++ K
Sbjct: 630 IFPNIATWDVLVRGFFKKLGHMGPIRILDDILGK 663



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 140/297 (47%), Gaps = 1/297 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L  + N   A+     +E+      +  T+  ++    + G L  A  +   M
Sbjct: 355 YNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKM 414

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              GV+ +  ++  +++   K  +  ++ ++ D M   G   +V +++   K +   GR 
Sbjct: 415 VNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRV 474

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
           + A R  ++M   G  P   TYN +L G F   +L+ A     +++ R + L++VTYNT+
Sbjct: 475 LWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTV 534

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF-D 261
           + G++   K +   ++   M    ++P  I+   +I  Y  + +   A++  D + +  +
Sbjct: 535 MYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKE 594

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           + P+ + +T+LL G+C++  + E    L +M+ + I P   +  + + G   K GH+
Sbjct: 595 LCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHM 651



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 16/143 (11%)

Query: 50  GLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQE 109
           G  +H +E  +  +++LGR             M   GV+ D     V+I +Y K G V+ 
Sbjct: 537 GFSSHGKEEWV--LQVLGR-------------MLVNGVKPDAITVNVVIYAYSKLGKVRT 581

Query: 110 SVKIFD-IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           +++  D I     +   + ++ +L   I        A  Y NKML++GI P   T++V++
Sbjct: 582 AIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLV 641

Query: 169 WGFFLSLKLETAIRFFEDMKSRG 191
            GFF  L     IR  +D+  +G
Sbjct: 642 RGFFKKLGHMGPIRILDDILGKG 664


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 226/512 (44%), Gaps = 52/512 (10%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAK---NSEHALQFFRWVERAGLFNHDRETHLKMIEIL 66
           L +  R    +   N V  VL   +     E A++FF W  +   + H  E H+ +IE+L
Sbjct: 101 LDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELL 160

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
                L   R +  ++  +G+   E     LI+S+G  G+V+E + ++  MK+ G     
Sbjct: 161 TFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENG----- 215

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
                                         I+P+ +TYN ++ G   S+ +E+A + FE 
Sbjct: 216 ------------------------------IDPSLYTYNFLVNGLVNSMFIESAEKVFEV 245

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M    I  D VTYN MI GY +  K+ +A + F +M+ KN++P  I+Y T+I+   +   
Sbjct: 246 MDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERD 305

Query: 247 ADDALRIFDEM--KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            D  L ++ EM  +  ++ P+  +Y+ ++ GLC   K +E   V   M ++     + ++
Sbjct: 306 FDTCLSLYLEMEERGLEIPPH--SYSLVIGGLCKQRKCMEAYAVFETMNQKGC-RANVAI 362

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+    K+G +  A  + + M       +A  Y +L+   CK+   D  ++L D   
Sbjct: 363 YTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCR 422

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
            K + +         A  Y  +I  L   G+   AE  F ++ +KG   D   +N +I  
Sbjct: 423 NKGVAI--------NAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDA 474

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
            +K G  D A  +   M   G  +    +  LI+   ++ +  +A    D MI+ G +P 
Sbjct: 475 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 534

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            + FR++   L   G+V  A +++  +   G+
Sbjct: 535 VASFRALAIGLCLCGKVARACKILDDLAPMGI 566



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 209/479 (43%), Gaps = 18/479 (3%)

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
           FFE +K RG+ +     N++I  +     ++E   ++  MKE  I+P++ +Y  ++ G V
Sbjct: 173 FFE-LKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 231

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                + A ++F+ M    + P+ VTY  ++ G C AGK+ +  +  R+M  + + P D 
Sbjct: 232 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKP-DK 290

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +M L+         +    +   M    +      Y ++I   CK      A  + + 
Sbjct: 291 ITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFET 350

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLI 421
           + +K              + Y  +I     NG   +A   F ++  +G   D V ++ L+
Sbjct: 351 MNQK--------GCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLV 402

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G  K G  D   E+      +GV  +A  Y  LI+   + G   DA+   + M E G +
Sbjct: 403 NGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCA 462

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
             S  + +++++L + G++  A  +   M E+G  + +     +++ L      EEA+  
Sbjct: 463 RDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKF 522

Query: 542 IDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
            D M+  G  P   +F +L   L   GK   A K+LD  L    II   ++E +++ L  
Sbjct: 523 WDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDD-LAPMGIIPETAFEDMINTLCK 581

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
           A +   A  +   I+++G     +    LI  L + GN+   D++ +++  ++  G  +
Sbjct: 582 AQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNS---DLVIKLMHSKIGIGYDR 637



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 65/330 (19%), Positives = 127/330 (38%), Gaps = 76/330 (23%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG---------------- 428
           +I+ L  +    K  + F +L  +G+L    A N+LI+     G                
Sbjct: 156 LIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENG 215

Query: 429 -NP------------------DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA- 468
            +P                  +SA ++ ++M    +  D   Y  +I+ Y + G+   A 
Sbjct: 216 IDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAM 275

Query: 469 --------------KTALDSMIEDGHS---------------------PASSLFRSVMES 493
                         K    ++I+  +S                     P  S +  V+  
Sbjct: 276 EKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHS-YSLVIGG 334

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L +  +   A  V ++M +KG + N+ +   ++++    G +EEA+   + M   G  P+
Sbjct: 335 LCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPD 394

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              +  L++ L + G+    ++L DFC  +   I+   Y  ++D L  AG+  +A ++  
Sbjct: 395 AVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFE 454

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++ EKG   D    + +I  L + G   QA
Sbjct: 455 EMSEKGCARDSYCYNAIIDALAKHGKIDQA 484


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 252/542 (46%), Gaps = 27/542 (4%)

Query: 128 SYDALFKLILRRGRY-----MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
           S+     L LR  +      + A  +F+ M+     P   ++N +L G            
Sbjct: 53  SFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFS 112

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            + +M+  G+S D+ T + + N      ++ EA    A +  +   P V++YTT+IKG  
Sbjct: 113 LYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLC 172

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              R  +A R+F  M+     PNAVTY  L+ GLC  G +    K+ +EM+        N
Sbjct: 173 MEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVN 232

Query: 303 S-----VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
                  +  ++   CK G  + A ++ + M    +  +   Y  LI  FC A  +D++ 
Sbjct: 233 CKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSK 292

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            L D++V++ +  +P    DM   +++ +I  LC  G+  +A+     ++++G++ + + 
Sbjct: 293 HLFDEMVDQGV--QP----DM--VTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLIT 344

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N+LI G    G+ +SA E+   M  +G+  D  +Y  LI  Y +  +  +A    + M+
Sbjct: 345 YNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEML 404

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           + G SP  + + ++++ LF+ G+V  A ++   M   GV  N  +    L+ L     + 
Sbjct: 405 QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLF 464

Query: 537 EALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA+   + +       ++ N+  L+  L + GK   A +L +         D+ +Y  ++
Sbjct: 465 EAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI 524

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGLNQEGNTKQADI--LSRMIRGE 650
                 G+  NA +ILF+ ME+ G T D  + + L+ G   EGN  +  I  L +M++ +
Sbjct: 525 HGFCKVGQVDNA-NILFEKMEENGCTPDIIAYNTLLCGF-CEGNKLEEVIKLLHKMVQKD 582

Query: 651 MS 652
           +S
Sbjct: 583 VS 584



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/555 (23%), Positives = 239/555 (43%), Gaps = 26/555 (4%)

Query: 20  QFDHNL---VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
            F H L   + N   G   +  A  FF  + R+    H          +LG + K+NH  
Sbjct: 53  SFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRS----HPIPPISSFNRLLGGLAKINHYS 108

Query: 77  CILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            +     +M   G+  D     +L         V E++     + + G   +V +Y  L 
Sbjct: 109 QLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLI 168

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM----KS 189
           K +    R   A R F +M   G  P   TY  ++ G   +  +  A++  ++M      
Sbjct: 169 KGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQ 228

Query: 190 RGISLD--VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            G++    V+TY+ +I+G  +  + DEA++LF EMK + + P VISY+T+I G+    + 
Sbjct: 229 YGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKW 288

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           D +  +FDEM    V+P+ VT++ L+  LC  GK+ E +K+L  M++R I P +   +  
Sbjct: 289 DQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVP-NLITYNS 347

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   C  G LN+A ++  +M    +  +   Y  LI  +CK      A+ L ++++   
Sbjct: 348 LIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEML--- 404

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
                Q       ++Y  +++ L   G+ G A+  F  +   GV  +   +   + G  K
Sbjct: 405 -----QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCK 459

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
                 A E+   +       + + Y CLI+   + G+   A    + + ++G  P    
Sbjct: 460 NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVT 519

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           +  ++    + G+V  A+ + + M E G   ++     +L        +EE +  +  M+
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579

Query: 547 QSGSVPNFDSLLSVL 561
           Q    PN  S   V+
Sbjct: 580 QKDVSPNAASCTIVV 594



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 231/498 (46%), Gaps = 20/498 (4%)

Query: 10  LQNKIR--ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL 66
           L N++R   L P  F  +++ N L        AL     + R G +  +  T+  +I+ L
Sbjct: 113 LYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRG-YIPNVVTYTTLIKGL 171

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM----KQLGV 122
               +++ A  + L M K G   +   +  LI+   + G V  ++K+   M     Q GV
Sbjct: 172 CMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGV 231

Query: 123 --ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
             +  V +Y  +   + + GR   AK  F +M ++G+ P   +Y+ ++ GF  + K + +
Sbjct: 232 NCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQS 291

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
              F++M  +G+  D+VT++ +I+   +  K+ EA+KL   M ++ I P +I+Y ++I G
Sbjct: 292 KHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDG 351

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +  V   + A  +F  M S  ++P+ ++YT L+ G C   K+ E   +  EM++    P 
Sbjct: 352 FCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP- 410

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           + + +  LL    + G +  A  +   M    +   +  YGI ++  CK +    A++L 
Sbjct: 411 NVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELF 470

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
           ++L              +   +Y+ +I  LC  G+   A   F +L ++G+  D V +N 
Sbjct: 471 NEL--------KSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNI 522

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +I G  K G  D+A  + + M   G   D  AY  L+  +    +  +    L  M++  
Sbjct: 523 MIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582

Query: 480 HSPASSLFRSVMESLFED 497
            SP ++    V++ L +D
Sbjct: 583 VSPNAASCTIVVDMLCKD 600



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/514 (22%), Positives = 228/514 (44%), Gaps = 21/514 (4%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+    K     +   +++ M+  G+   + +   L   +    R   A      +L
Sbjct: 94  FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGIL 153

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P   TY  ++ G  +  ++  A R F  M+  G + + VTY T+I G  +   ++
Sbjct: 154 RRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVN 213

Query: 214 EAEKLFAEMKEK------NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
            A KL  EM         N +P VI+Y+ +I G   V R D+A  +F+EMK+  + P+ +
Sbjct: 214 IALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVI 273

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           +Y+ L+ G C AGK  + + +  EMV++ + P D   F  L+   CK G +  A  +L+ 
Sbjct: 274 SYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQP-DMVTFSVLIDTLCKEGKVTEAKKLLEV 332

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR-PQSTLDMEASSYNPM 386
           MI+  I      Y  LI+ FC     + A         +E+ L  P   L+ +  SY  +
Sbjct: 333 MIQRGIVPNLITYNSLIDGFCMVGDLNSA---------RELFLSMPSKGLEPDEISYTTL 383

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I   C   +  +A   + ++++ G    V  +  L++G  ++G    A ++  +M   GV
Sbjct: 384 INGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGV 443

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             ++  Y   ++   +     +A    + +           +  +++ L + G+++TA  
Sbjct: 444 SANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWE 503

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           + + + ++G++ ++     ++      G V+ A    + M ++G  P+   +++LL    
Sbjct: 504 LFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFC 563

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
           E  K    +KLL   + +D   + AS   V+D L
Sbjct: 564 EGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 162/362 (44%), Gaps = 37/362 (10%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A + F  ++  G+   D  ++  +I      GK + ++ +  +M  +GVQ D   F V
Sbjct: 254 DEAKELFEEMKAQGMI-PDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSV 312

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI++  K+G V E+ K+ ++M Q G+  ++ +Y++L       G    A+  F  M S+G
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +EP   +Y  ++ G+  + K++ A+  + +M   G S +V TY T++ G  +  K+ +A+
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK 432

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK------------- 263
           KLF  MK   +      Y   + G    +   +A+ +F+E+KS++ K             
Sbjct: 433 KLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGL 492

Query: 264 ----------------------PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                                 P+ VTY  ++ G C  G++     +  +M E    P D
Sbjct: 493 CKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTP-D 551

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  LL   C+   L     +L  M++  +   A    I+++  CK E Y + + LL 
Sbjct: 552 IIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLP 611

Query: 362 KL 363
           K 
Sbjct: 612 KF 613


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 230/528 (43%), Gaps = 51/528 (9%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK----SRGISLDVVTYNTMINGYNRFKK 211
           G  P   ++N +L  F  + +   A  FF  +      R I+ ++ TYN ++        
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           +D A  LF+ ++ + + P  ++Y+T++ G    ++ D+AL + DEM ++ V+ +AV Y A
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           LL G    G   +  KV  ++V       + + +  +L   CK G    A +V   M+  
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
           +   +   YGILI   C++   D A ++   +V+  ++L        + S YN +I+  C
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVL--------DVSVYNSLIKGFC 345

Query: 392 HNGQTGKAEIFF--------RQ-----LMKKGVLDP-----------------------V 415
             G+TG+A  F+        RQ     +M KG+LD                        V
Sbjct: 346 EVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKV 405

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            F  LI G  + G  + AFEI++     G   D  +Y  +I  + + G   DA     +M
Sbjct: 406 TFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNM 465

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           ++DG  P S ++ +++       ++  A ++   M   G    +     +++ L      
Sbjct: 466 VKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKY 525

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           +EA      M++ G  P+   + SL+  L    K   A+++ D  L     +D+  +  +
Sbjct: 526 QEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNIL 585

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +  L +AGK   A+ I  ++ EK    +  + + L+ G  + G+  +A
Sbjct: 586 IHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKA 633



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 118/546 (21%), Positives = 248/546 (45%), Gaps = 21/546 (3%)

Query: 15  RALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P    +N++   L    + + A+  F  + R G+   DR T+  ++  L +  +L+
Sbjct: 152 RRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGV-APDRVTYSTLMSGLAKHDQLD 210

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD-IMKQLGVERSVKSYDAL 132
           +A  +L +MP  GVQ D   +  L+    + G+ ++++K+++ +++  G   ++ +Y  +
Sbjct: 211 NALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVM 270

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + + GR+  A   +++M++   +    TY +++ G   S  +++A R + DM   G+
Sbjct: 271 LDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGL 330

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
            LDV  YN++I G+    +  EA K +       I   + +Y  M KG +      +A  
Sbjct: 331 VLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATE 389

Query: 253 IFDEMKS-FDVKPNAVTYTALLPGLCDAG---KMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +  ++++     P+ VT+  L+ GLC+ G   +  E+ +  R   E      D   +  +
Sbjct: 390 LLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEEL----DVFSYSSM 445

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   CK G  + A +V K M++      +  Y  LI  FC+    + AIK+  ++     
Sbjct: 446 INRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGC 505

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
              P         +YN +I  LC   +  +A    ++++++G   D   + +LIRG  ++
Sbjct: 506 C--PTII------TYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRD 557

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
              D A  I   +   G+  D   +  LI      G+  +A      M E   SP    +
Sbjct: 558 KKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTY 617

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++M+  +E G +  A+ +  ++++ G+K ++      ++ L       E +  ++ ++ 
Sbjct: 618 NTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677

Query: 548 SGSVPN 553
           +G +P 
Sbjct: 678 TGIMPT 683



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 181/409 (44%), Gaps = 37/409 (9%)

Query: 53  NH--DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQES 110
           NH  D  T+  +I  L R G ++ A  +  DM K G+  D  ++  LI+ + + G   E+
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLW 169
            K +D     G+ R + +Y+ + K +L  G    A     ++ ++    P + T+  ++ 
Sbjct: 354 WKFWDSTGFSGI-RQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIH 412

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           G   +     A    ED ++ G  LDV +Y++MIN + +  +  +A +++  M +   +P
Sbjct: 413 GLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKP 472

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
               Y  +I G+  V + +DA++I+ EM S    P  +TY  L+ GLC A K  E   + 
Sbjct: 473 NSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLT 532

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
           +EM+ER   P D   +  L+   C+   ++ A  +   ++   +  +   + ILI   C 
Sbjct: 533 KEMLERGFKP-DIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCS 591

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQ--------------STLDMEAS-------------- 381
           A   D A  +  ++ EK     P                ++D  AS              
Sbjct: 592 AGKVDEAFCIYLEMKEKNC--SPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDI 649

Query: 382 -SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEG 428
            +YN  I+ LC   +T +  +   +++  G++  V  ++ L+R   K G
Sbjct: 650 VTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 240/493 (48%), Gaps = 12/493 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L ++GK+  A  +L+ M  +G   D   + V++  Y + G + + +K+ D +K  G
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKG 307

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++     Y+ +  L+ + G  + A++    M   G+ P    Y  ++ GF     +  A 
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAAC 367

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F++M+ + I  D+VTY ++I+G  +  KM EA ++F EM  K +EP  ++YT +I GY
Sbjct: 368 KLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGY 427

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                  +A  + ++M    + PN VTYTAL  GLC  G++    ++L EM  + + P +
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQP-N 486

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++   CK G++     +++ M       +   Y  L++ +CK     +A +LL 
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR 546

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            ++ K    R Q TL     ++N ++   C +G     E     +++KG++ +   FN+L
Sbjct: 547 IMLNK----RLQPTL----VTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSL 598

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           ++ +  + N  +  EI K M  RGV  D++ Y  LI+ + +     +A      M+E G+
Sbjct: 599 MKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGY 658

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           S  ++ + +++   ++  +   A ++ + M + G+    D+    ++     G+ E  L 
Sbjct: 659 SVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLE 718

Query: 541 RIDLMMQ--SGSV 551
             D  M   SG++
Sbjct: 719 LCDEFMTELSGTI 731



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/446 (23%), Positives = 211/446 (47%), Gaps = 47/446 (10%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  +I +L + G++  A  +L  M K GV  D  ++  +I  + K G V  + K+F
Sbjct: 311 DEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLF 370

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M++  +   + +Y ++   I + G+ + A+  FN+ML +G+EP   TY  ++ G+  +
Sbjct: 371 DEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKA 430

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +++ A      M  +G++ +VVTY  + +G  +  ++D A +L  EM  K ++P V +Y
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++ G   +   +  +++ +EM      P+ +TYT L+   C  G+M +  ++LR M+ 
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLN 550

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + + P   +                                    + +L+  FC + M +
Sbjct: 551 KRLQPTLVT------------------------------------FNVLMNGFCMSGMLE 574

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC-HNGQTGKAEIFFRQLMKKGVL- 412
              +L++ ++EK I+  P +T      ++N +++  C  N      EI ++ +  +GV+ 
Sbjct: 575 DGERLIEWMLEKGIM--PNAT------TFNSLMKQYCIKNNMRATTEI-YKAMHDRGVMP 625

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D   +N LI+GH K  N   A+ + K M  +G    A  Y  LI  + ++ +  +A+   
Sbjct: 626 DSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLF 685

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDG 498
           + M + G      ++   ++  +E+G
Sbjct: 686 EEMRKHGLVAEKDIYDIFVDVNYEEG 711



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 227/473 (47%), Gaps = 13/473 (2%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           ++ +VK+F+   +LGV  +  S + +   + + G+   A     +M   G  P   +Y V
Sbjct: 223 IKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGV 282

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++ G+    +L+  ++  +++K +G+  D   YN +I    +  ++ EAE+L   M++  
Sbjct: 283 VVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWG 342

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           + P  + YTT+I G+  +     A ++FDEM+   + P+ VTYT+++ G+C +GKMVE +
Sbjct: 343 VFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAR 402

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           ++  EM+ + + P D   +  L+   CK+G +  A  V   M++  +      Y  L + 
Sbjct: 403 EMFNEMLVKGLEP-DEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADG 461

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK    D A +LL ++  K   L+P         +YN ++  LC  G   +      ++
Sbjct: 462 LCKNGEIDVANELLHEMSRKG--LQPN------VYTYNTIVNGLCKIGNIEQTVKLMEEM 513

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
              G   D + +  L+  + K G    A E+++IM  + +      +  L+  +   G  
Sbjct: 514 DLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGML 573

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            D +  ++ M+E G  P ++ F S+M+       ++  + + K+M ++GV  + +    +
Sbjct: 574 EDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNIL 633

Query: 526 LEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLD 575
           ++      +++EA      M++ G   +   +D+L+    ++ K + A KL +
Sbjct: 634 IKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFE 686



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/523 (20%), Positives = 229/523 (43%), Gaps = 51/523 (9%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK-LETAIRFFEDM 187
           +D  F++++  G  + A++ F+K+L  G+  +  + N+ L     + + ++ A++ FE+ 
Sbjct: 174 FDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEF 233

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
              G+  + V+ N +++   +  K+ EA  L  +M ++   P V+SY  ++ GY  +   
Sbjct: 234 PELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGEL 293

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           D  L++ DE+K   +KP                                    D  ++  
Sbjct: 294 DKVLKLVDELKGKGLKP------------------------------------DEYIYNN 317

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++ + CK+G +  A  +L+ M +  +  +   Y  +I  FCK      A KL D++  K+
Sbjct: 318 IILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKK 377

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
           I+         +  +Y  +I  +C +G+  +A   F +++ KG+  D V +  LI G+ K
Sbjct: 378 IV--------PDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCK 429

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G    AF +   M ++G+  +   Y  L +   + GE   A   L  M   G  P    
Sbjct: 430 AGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYT 489

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           + +++  L + G ++   ++M+ M   G   +      +++A    G + +A   + +M+
Sbjct: 490 YNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIML 549

Query: 547 QSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
                P    F+ L++     G      +L+++ L +  + +  ++  ++         +
Sbjct: 550 NKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQ-YCIKNNM 608

Query: 604 NAYSILFKIM-EKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            A + ++K M ++G + D  + + LI G  +  N K+A  L +
Sbjct: 609 RATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHK 651



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 1/207 (0%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + +N + N L    N E  ++    ++ AG F  D  T+  +++   ++G++  A  +L 
Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEMDLAG-FYPDTITYTTLMDAYCKMGEMAKAHELLR 546

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M  K +Q     F VL+  +   G++++  ++ + M + G+  +  ++++L K    + 
Sbjct: 547 IMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKN 606

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                   +  M   G+ P  +TYN+++ G   +  ++ A    ++M  +G S+   TY+
Sbjct: 607 NMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYD 666

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNI 227
            +I G+ + KK  EA KLF EM++  +
Sbjct: 667 ALIRGFYKRKKFVEARKLFEEMRKHGL 693


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 243/530 (45%), Gaps = 32/530 (6%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG-------- 86
           N +  L+++ W+ +    +   E   K++  L    + +  R  L    + G        
Sbjct: 80  NPDLCLRYYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSI 139

Query: 87  ---------VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
                    V  +  + ++L+ +Y      +   + F      G + S  S   L   +L
Sbjct: 140 FHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALL 199

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           ++ R    +  + +M+   I+P   T+NV++     + K+  A    EDMK  G S +VV
Sbjct: 200 KQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVV 259

Query: 198 TYNTMINGYNRF---KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           +YNT+I+GY +     KM +A+ +  EM E  + P + ++  +I G+   +    +L++F
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVF 319

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            EM   DV PN +TY +L+ GLC+ GK+ E   +  +MV   + P +   +  L+   CK
Sbjct: 320 KEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQP-NLITYHSLINGFCK 378

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           +G +  A D+  ++           Y +LI+ +CK    D    L +++ E+E I+    
Sbjct: 379 NGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEM-EREGIVP--- 434

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAF 434
               +  +YN +I  LC NG    A+  F QL  KG+ D V F+ L+ G+   G    A 
Sbjct: 435 ----DVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAA 490

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL--FRSVME 492
            ++K M + G+      Y  +++ Y ++G    A T + + +E       ++  +  +++
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIMMKGYCKEGN-LKAATNMRTQMEKERRLRMNVASYNVLLQ 549

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
              + G+++ A+ ++  M+EKG+  N      + E ++ +G V +  G +
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGHL 599



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 179/415 (43%), Gaps = 28/415 (6%)

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           + E L+ EM  + I+P V ++  +I       + + A  + ++MK +   PN V+Y  L+
Sbjct: 206 DVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLI 265

Query: 274 PGLCD---AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            G C     GKM +   VL+EMVE  + P + + F  L+    K  +L  +  V K M+ 
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENEVSP-NLTTFNILIDGFWKDDNLPGSLKVFKEMLD 324

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +      Y  LI   C     + AI + DK+V   +    Q  L     +Y+ +I   
Sbjct: 325 QDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGV----QPNL----ITYHSLINGF 376

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C NG   +A   F  +  +G       +N LI  + K G  D  F + + M R G+  D 
Sbjct: 377 CKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y CLI    R G    AK   D +   G  P    F  +ME     G  + A+ ++K 
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKE 495

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---------SVPNFDSLLSV 560
           M + G+K        +   ++M+G+ +E   +    M++          +V +++ LL  
Sbjct: 496 MSKMGLKPR-----HLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            S+KGK   A  LL+  L +  + +  +YE V + ++  G   +    LF +  K
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGHLFNVSTK 605



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 129/270 (47%), Gaps = 7/270 (2%)

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
           + A S  P++  L    ++   E  +++++++ +   V  FN +I    K G  + A ++
Sbjct: 186 LSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245

Query: 437 VKIMGRRGVPRDADAYICLIESYLR---KGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           ++ M   G   +  +Y  LI+ Y +    G+   A   L  M+E+  SP  + F  +++ 
Sbjct: 246 MEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDG 305

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            ++D  +  + +V K M+++ V  N+     ++  L   G + EA+G  D M+ +G  PN
Sbjct: 306 FWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPN 365

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              + SL++   + G    A+ + D   G+        Y  ++DA    GK  + +++  
Sbjct: 366 LITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKE 425

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++  +G V D  + + LIAGL + GN + A
Sbjct: 426 EMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/345 (21%), Positives = 150/345 (43%), Gaps = 17/345 (4%)

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++  Y    R +     F     +  K +A++   L+  L    +  +V+ + +EM+ R 
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRK 218

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK----AEM 352
           I P +   F  ++   CK+G +N A DV++ M           Y  LI+ +CK     +M
Sbjct: 219 IQP-NVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKM 277

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           Y +A  +L ++VE E+   P  T      ++N +I     +     +   F++++ + V+
Sbjct: 278 Y-KADAVLKEMVENEV--SPNLT------TFNILIDGFWKDDNLPGSLKVFKEMLDQDVI 328

Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            + + +N+LI G    G  + A  +   M   GV  +   Y  LI  + + G   +A   
Sbjct: 329 PNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDM 388

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            DS+   G  P + ++  ++++  + G++     + + M  +G+  ++     ++  L  
Sbjct: 389 FDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448

Query: 532 RGHVEEALGRIDLMMQSG--SVPNFDSLLSVLSEKGKTIAAVKLL 574
            G++E A    D +   G   +  F  L+     +G++  A  LL
Sbjct: 449 NGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLL 493



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 6/244 (2%)

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+  ++     +  FE  K  G  G    A +   L+ + L++   AD +     MI   
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRK 218

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA---LLMRGHVE 536
             P    F  V+ +L + G++  A  VM+ M   G   N+     +++    L   G + 
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMY 278

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           +A   +  M+++   PN   F+ L+    +      ++K+    L +D I ++ +Y  ++
Sbjct: 279 KADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLI 338

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
           + L   GK   A  +  K++  G   +  +   LI G  + G  K+A  +   ++G+ +R
Sbjct: 339 NGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTR 398

Query: 654 GSQK 657
            + +
Sbjct: 399 PTTR 402


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 192/407 (47%), Gaps = 10/407 (2%)

Query: 82   MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
            M   G+  D   F +LI  + +      ++ +   M +LG + S+ +  +L     +  R
Sbjct: 641  MENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNR 700

Query: 142  YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            +  A    + M   G+EP    YN ++ G   +  L  A+  F  M+ +GI  D VTYNT
Sbjct: 701  FQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760

Query: 202  MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            +I+G     +  +A +L  +M ++ I+P VI +T +I  +V      +A  ++ EM    
Sbjct: 761  LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820

Query: 262  VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            V PN +TY +L+ G C  G++ + + +   MV +   P D   +  L+   CKS  +   
Sbjct: 821  VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFP-DVVTYNTLITGFCKSKRVEDG 879

Query: 322  ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
              +   M    +  +A  Y  LI  +C+A   + A K+ +++V+  +   P   +     
Sbjct: 880  MKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV---PPDIV----- 931

Query: 382  SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            +YN ++  LC+NG+  KA +    L K  + +D + +N +I+G  +      A+ + + +
Sbjct: 932  TYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSL 991

Query: 441  GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
             R+GV  DA AYI +I    R G   +A      M EDG  P+  ++
Sbjct: 992  TRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 188/391 (48%), Gaps = 11/391 (2%)

Query: 39   ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
             +  F  +E  G+ +HD  +   +I    R  + + A  +L  M K G Q        L+
Sbjct: 634  VIYLFHKMENLGI-SHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLL 692

Query: 99   ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
              + +    QE+V + D M +LG+E +V  Y+ +   + +      A   F  M  +GI 
Sbjct: 693  NGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIV 752

Query: 159  PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
                TYN ++ G   S +   A R   DM  R I  +V+ +  +I+ + +   + EA+ L
Sbjct: 753  ADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNL 812

Query: 219  FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
            + EM  +++ P +++Y ++I G+    R  DA  +FD M S    P+ VTY  L+ G C 
Sbjct: 813  YKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCK 872

Query: 279  AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            + ++ +  K+  EM  + +   D   +  L+   C++G LN A  V   M+   +P +  
Sbjct: 873  SKRVEDGMKLFCEMTHQGL-VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIV 931

Query: 339  HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
             Y IL++  C     ++A+ +++ L + +        +D++  +YN +IQ +C N +  +
Sbjct: 932  TYNILLDCLCNNGKIEKALVMVEDLQKNQ--------MDVDIITYNIIIQGMCRNDKVKE 983

Query: 399  AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
            A   FR L +KGV LD +A+  +I G  + G
Sbjct: 984  AWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 198/432 (45%), Gaps = 14/432 (3%)

Query: 125  SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
            S+  +  +   I +  ++ +    F+KM + GI    +++ +++  F    +   A+   
Sbjct: 614  SIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALL 673

Query: 185  EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
              M   G    +VT  +++NG+ +  +  EA  L   M E  +EP V+ Y T+I G    
Sbjct: 674  GKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKN 733

Query: 245  ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
               ++AL IF  M+   +  +AVTY  L+ GLC++G+  +  ++LR+MV+R I P +   
Sbjct: 734  RDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDP-NVIF 792

Query: 305  FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
            F  L+    K G+L  A ++ K MIR S+      Y  LI  FC       A  + D +V
Sbjct: 793  FTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852

Query: 365  EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
             K     P      +  +YN +I   C + +       F ++  +G++ D   +N LI G
Sbjct: 853  SKGCF--P------DVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHG 904

Query: 424  HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
            + + G  + A ++   M   GVP D   Y  L++     G+   A   ++ + ++     
Sbjct: 905  YCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVD 964

Query: 484  SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI--LEALLMRGHVEEALGR 541
               +  +++ +  + +V+ A  + +S+  KGVK  LD +A I  +  L   G   EA   
Sbjct: 965  IITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVK--LDAIAYITMISGLCRNGLRREADKL 1022

Query: 542  IDLMMQSGSVPN 553
               M + G +P+
Sbjct: 1023 CTRMKEDGFMPS 1034



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 177/397 (44%), Gaps = 13/397 (3%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G+  D   F +LI  + +   +  ++ I   M +LG + S+ ++ +L      R R   A
Sbjct: 95  GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA 154

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG-ISLDVVTYNTMIN 204
                 M+  G EP    YN ++     +  +  A+    +M+ +G ++ D+VTYNT++ 
Sbjct: 155 FSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLT 214

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G     +  +A ++  +M ++ I P V ++T +I  +V     D+A  ++ +M    + P
Sbjct: 215 GLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP 274

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N VTY +L+ GLC  G++   +K    M  +   P +   +  L+   CKS  +     +
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFP-NVVTYNTLINGFCKSRRVEDGMKL 333

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
            + M R  +  +   Y  LI  +C+      A  +   +V   +      T D+   ++ 
Sbjct: 334 FQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGV------TPDI--ITHC 385

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKG--VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
            ++  LC NG+ G A + F   M+ G   L  VA+N +I G  K    + A+E+   +  
Sbjct: 386 ILLHGLCVNGEIGSAMVKFND-MRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPV 444

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            GV  DA  Y  +I    + G   +A      M EDG
Sbjct: 445 EGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 146/294 (49%), Gaps = 1/294 (0%)

Query: 72   LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
            LN+A  I   M KKG+  D   +  LI      G   ++ ++   M +  ++ +V  + A
Sbjct: 736  LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTA 795

Query: 132  LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
            L    ++ G  + AK  + +M+   + P   TYN ++ GF +  +L  A   F+ M S+G
Sbjct: 796  LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855

Query: 192  ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
               DVVTYNT+I G+ + K++++  KLF EM  + +     +Y T+I GY    + + A 
Sbjct: 856  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQ 915

Query: 252  RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            ++F+ M    V P+ VTY  LL  LC+ GK +E   V+ E +++     D   +  ++  
Sbjct: 916  KVFNRMVDCGVPPDIVTYNILLDCLCNNGK-IEKALVMVEDLQKNQMDVDIITYNIIIQG 974

Query: 312  QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             C++  +  A  + +++ R  +  +A  Y  +I   C+  +   A KL  ++ E
Sbjct: 975  MCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKE 1028



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 161/323 (49%), Gaps = 7/323 (2%)

Query: 25  LVYNVLHGA--KNSEH--ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           +VYN L     KN +   AL+    +E+ G    D  T+  ++  L   G+   A  IL 
Sbjct: 171 VVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILR 230

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           DM K+ +  D   F  LI+++ K+G + E+ +++  M Q  +  +  +Y++L   +   G
Sbjct: 231 DMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHG 290

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   AK+ F+ M S+G  P   TYN ++ GF  S ++E  ++ F+ M   G+  D  TYN
Sbjct: 291 RLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYN 350

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+I+GY +  K+  A+ +F+ M    + P +I++  ++ G         A+  F++M+S 
Sbjct: 351 TLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSG 410

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           +     V Y  ++ GLC A K+ E  ++   +    + P   +  + +LG+ CK+G    
Sbjct: 411 EKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGL-CKNGPRRE 469

Query: 321 AADVLKAMIRLSIPTEA--GHYG 341
           A ++ + M    I  +A  GH G
Sbjct: 470 ADELFRRMKEDGIICQAEDGHLG 492



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 145/648 (22%), Positives = 255/648 (39%), Gaps = 84/648 (12%)

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG-VERSVKSY 129
           +++ A  ++  M K G + +  ++  LI+   K G V  ++++ + M++ G +   + +Y
Sbjct: 150 RIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTY 209

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L   +   G +  A R    M    I P   T+  ++  F     L+ A   ++ M  
Sbjct: 210 NTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQ 269

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
             I  + VTYN++ING     ++  A+K F  M  K   P V++Y T+I G+    R +D
Sbjct: 270 SSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVED 329

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
            +++F  M    +  +  TY  L+ G C  GK+   + +   MV   + P D      LL
Sbjct: 330 GMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTP-DIITHCILL 388

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C +G + +A      M           Y I+I   CKA+  + A +L  +L      
Sbjct: 389 HGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRL------ 442

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGN 429
             P   +  +A +Y  MI  LC NG   +A+  FR++ + G++          GH  E  
Sbjct: 443 --PVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAE-----DGHLGEHG 495

Query: 430 PDSAFEIVKIM----GRRGVPRDADAYICLIESYLRKGE----PADAKTALDS------- 474
            ++   +  I+     RR +    D Y    ++ L        P  + +++         
Sbjct: 496 TNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLL 555

Query: 475 MIEDGHSPASSLF-------------------RSVMESL-FEDG---------------- 498
           ++E G++P S  F                   RS +  + F+D                 
Sbjct: 556 LLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSI 615

Query: 499 ----RVQTASRVMK----------SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
               RV TA   M            M   G+  +L     ++           AL  +  
Sbjct: 616 VDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGK 675

Query: 545 MMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           MM+ G   S+    SLL+   +  +   AV L+D         ++  Y  V++ L     
Sbjct: 676 MMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRD 735

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN-TKQADILSRMIR 648
             NA  I + + +KG V D  + + LI+GL   G  T  A +L  M++
Sbjct: 736 LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVK 783



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 155/294 (52%), Gaps = 2/294 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N V N L   ++  +AL+ F  +E+ G+   D  T+  +I  L   G+   A  +L DM
Sbjct: 723  YNTVINGLCKNRDLNNALEIFYGMEKKGIV-ADAVTYNTLISGLCNSGRWTDAARLLRDM 781

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K+ +  +   F  LI+++ K+G + E+  ++  M +  V  ++ +Y++L      +GR 
Sbjct: 782  VKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRL 841

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              AK  F+ M+S+G  P   TYN ++ GF  S ++E  ++ F +M  +G+  D  TYNT+
Sbjct: 842  GDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTL 901

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I+GY +  K++ A+K+F  M +  + P +++Y  ++       + + AL + ++++   +
Sbjct: 902  IHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQM 961

Query: 263  KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
              + +TY  ++ G+C   K+ E   + R +  + +   D   ++ ++   C++G
Sbjct: 962  DVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV-KLDAIAYITMISGLCRNG 1014



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 130/615 (21%), Positives = 253/615 (41%), Gaps = 40/615 (6%)

Query: 62   MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
            MI  L +  K+  A  +   +P +GV+ D   + ++I    K G  +E+ ++F  MK+ G
Sbjct: 422  MIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481

Query: 122  V----------ERSVKSYDALFKLIL--RRGRYMMAKRYFNKMLSE--------GIEPTR 161
            +          E    +  +L  +I+  +R R +M         S+        G+ P  
Sbjct: 482  IICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIA 541

Query: 162  HTYNVMLWGFFLSLKLETA----IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
             + +V  +     L LE       R F              Y   +       K D+A  
Sbjct: 542  SSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFG 601

Query: 218  LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
            LF EM +    P+++ +T ++     + + D  + +F +M++  +  +  ++T L+   C
Sbjct: 602  LFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFC 661

Query: 278  DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
               +      +L +M++    P   ++   LL   C+      A  ++ +M  L +    
Sbjct: 662  RCSRFSLALALLGKMMKLGFQPSIVTL-GSLLNGFCQGNRFQEAVSLVDSMAELGLEPNV 720

Query: 338  GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
              Y  +I   CK    + A+++   + +K I+         +A +YN +I  LC++G+  
Sbjct: 721  VIYNTVINGLCKNRDLNNALEIFYGMEKKGIV--------ADAVTYNTLISGLCNSGRWT 772

Query: 398  KAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A    R ++K+ + DP  + F  LI    KEGN   A  + K M RR V  +   Y  L
Sbjct: 773  DAARLLRDMVKRKI-DPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831

Query: 456  IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            I  +  +G   DAK   D M+  G  P    + +++    +  RV+   ++   M  +G+
Sbjct: 832  INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891

Query: 516  KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
              +      ++      G +  A    + M+  G  P+   ++ LL  L   GK   A+ 
Sbjct: 892  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALV 951

Query: 573  LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
            +++        +D+ +Y  ++  +    K   A+ +   +  KG   D  +   +I+GL 
Sbjct: 952  MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011

Query: 633  QEGNTKQAD-ILSRM 646
            + G  ++AD + +RM
Sbjct: 1012 RNGLRREADKLCTRM 1026



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 182/433 (42%), Gaps = 11/433 (2%)

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
           ++++ +F  M Q     SV  +  L   I    RY     +  +M   GI    +++ ++
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           +  F    +L  A+     M   G    +VT+ ++++G+    ++ +A  L A M +   
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEM-KSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           EP V+ Y T+I         + AL + +EM K   +  + VTY  LL GLC +G+  +  
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           ++LR+M +R I P D   F  L+    K G+L+ A ++ K M++ SI      Y  LI  
Sbjct: 227 RILRDMTKRRINP-DVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C       A K  D +  K     P         +YN +I   C + +       F+++
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCF--PN------VVTYNTLINGFCKSRRVEDGMKLFQRM 337

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            ++G++ D   +N LI G+ + G    A +I   M   GV  D   +  L+      GE 
Sbjct: 338 YREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEI 397

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A    + M           +  ++  L +  +V+ A  +   +  +GVK +      +
Sbjct: 398 GSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIM 457

Query: 526 LEALLMRGHVEEA 538
           +  L   G   EA
Sbjct: 458 ILGLCKNGPRREA 470



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/449 (22%), Positives = 180/449 (40%), Gaps = 49/449 (10%)

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G++   R +DAL +F EM      P+ V +T LL  + +  +  E      + +E +   
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANL-RRYETVIYFSQQMELFGIS 97

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D   F  L+   C+   L+ A  +L  M++L        +G L+  FC       A  L
Sbjct: 98  HDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSL 157

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL--DPVAF 417
           +  +V        +S  +     YN +I  LC NG    A     ++ KKG L  D V +
Sbjct: 158 VASMV--------KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTY 209

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N L+ G    G    A  I++ M +R +  D   +  LI++++++G   +A+     M++
Sbjct: 210 NTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQ 269

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
               P +  + S++  L   GR+  A +    M  KG   N+     ++        VE+
Sbjct: 270 SSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVED 329

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLG--------RDCII-- 584
            +     M + G V +   +++L+    + GK   A  +  + +           CI+  
Sbjct: 330 GMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLH 389

Query: 585 ----------------DLASYEKVL---------DALLAAGKTLNAYSILFKIMEKGGVT 619
                           D+ S EK L           L  A K   A+ +  ++  +G   
Sbjct: 390 GLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKP 449

Query: 620 DWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           D ++   +I GL + G  ++AD L R ++
Sbjct: 450 DARTYTIMILGLCKNGPRREADELFRRMK 478



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 5/206 (2%)

Query: 65   ILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
            I GR+G   H    + D M  KG   D   +  LI  + K   V++ +K+F  M   G+ 
Sbjct: 837  IQGRLGDAKH----MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892

Query: 124  RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
                +Y+ L     + G+  +A++ FN+M+  G+ P   TYN++L     + K+E A+  
Sbjct: 893  GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVM 952

Query: 184  FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
             ED++   + +D++TYN +I G  R  K+ EA  LF  +  K ++   I+Y TMI G   
Sbjct: 953  VEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCR 1012

Query: 244  VERADDALRIFDEMKSFDVKPNAVTY 269
                 +A ++   MK     P+   Y
Sbjct: 1013 NGLRREADKLCTRMKEDGFMPSERIY 1038


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 209/432 (48%), Gaps = 45/432 (10%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F+ D+ ++  +I  L +VG+   A  +L  +    VQ +  M+  +I+S  K  +V E+ 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            +F  M   G+   V +Y AL       G+   A   FNKM+ E I+P  +T+N+++  F
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               K++     F+ M  +GI  + VTYN++++GY   K++++A+ +F  M +  + P +
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            SY+ MI G+  +++ D+A+ +F EM   ++ P+ VTY++L+ GL  +G++    +++ +
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M +R +PP                             IR         Y  +++  CK  
Sbjct: 426 MHDRGVPPT----------------------------IRT--------YNSILDALCKIH 449

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG- 410
             D+AI LL KL +K I  +P         +Y+ +I+ LC +G+   A   F  L+ KG 
Sbjct: 450 QVDKAIALLTKLKDKGI--QPN------MYTYSILIKGLCQSGKLEDARKVFEGLLVKGH 501

Query: 411 VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            L+   +  +I+G   EG  + A  ++  M   G   DA  Y  +I S  +K E   A+ 
Sbjct: 502 NLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561

Query: 471 ALDSMIEDGHSP 482
            L  MI  G  P
Sbjct: 562 LLREMIARGVRP 573



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 215/458 (46%), Gaps = 13/458 (2%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G++ ++ + + L     + G    A   F K+L  G  P   T+  ++ G  L  +++ A
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQA 174

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
             F + + + G   D ++Y T+I+G  +  +   A  L   +    ++P V+ Y T+I  
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              V+  ++A  +F EM S  + P+ VTY+AL+ G C  GK+ +   +  +M+   I P 
Sbjct: 235 MCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKP- 293

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  L+   CK G +     V   M++  I      Y  L++ +C  +  ++A  + 
Sbjct: 294 DVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIF 353

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + +         Q  ++ +  SY+ MI   C   +  +A   F+++ +K ++ D V +++
Sbjct: 354 NTMA--------QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G SK G    A ++V  M  RGVP     Y  ++++  +  +   A   L  + + G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  +++ L + G+++ A +V + ++ KG   N+D    +++   + G   EAL
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEAL 525

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
             +  M  +G +P+   ++ ++  L +K +   A KLL
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLL 563



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 117/499 (23%), Positives = 231/499 (46%), Gaps = 11/499 (2%)

Query: 19  PQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           P F+ N +   L  +K+    L   + +E  G+  +    ++ +I    ++G +  A  +
Sbjct: 84  PAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI-LINCFCQLGLIPFAFSV 142

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
              + K G   D   F  LI+    KG +Q++    D +  LG      SY  L   + +
Sbjct: 143 FAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G    A     ++    ++P    YN ++        +  A   F +M S+GIS DVVT
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVT 262

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y+ +I+G+    K+++A  LF +M  +NI+P V ++  ++  +    +  +   +FD M 
Sbjct: 263 YSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
              +KPN VTY +L+ G C   ++ + + +   M +  + P   S  + + G  CK    
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF-CKIKKF 381

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A ++ K M R +I  +   Y  LI+   K+     A++L+D++ ++ +   P +    
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV---PPTI--- 435

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
              +YN ++  LC   Q  KA     +L  KG+  +   ++ LI+G  + G  + A ++ 
Sbjct: 436 --RTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVF 493

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           + +  +G   + D Y  +I+ +  +G   +A   L  M ++G  P +  +  ++ SLF+ 
Sbjct: 494 EGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553

Query: 498 GRVQTASRVMKSMVEKGVK 516
                A ++++ M+ +GV+
Sbjct: 554 DENDMAEKLLREMIARGVR 572



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/514 (22%), Positives = 235/514 (45%), Gaps = 16/514 (3%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   FN++L     P    +N +L     S    T +   + M+ RGI  ++V  N +IN
Sbjct: 69  AVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 128

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            + +   +  A  +FA++ +    P  I++TT+IKG     +   A    D++ +     
Sbjct: 129 CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHF 188

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + ++Y  L+ GLC  G+      +L+ +    + P +  ++  ++   CK   +N A D+
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP-NVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              MI   I  +   Y  LI  FC     + AI L +K++ + I  +P      +  ++N
Sbjct: 248 FSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENI--KP------DVYTFN 299

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            ++   C +G+  + +  F  +MK+G+  + V +N+L+ G+      + A  I   M + 
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           GV  D  +Y  +I  + +  +  +A      M      P    + S+++ L + GR+  A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
            +++  M ++GV   +     IL+AL     V++A+  +  +   G  PN   +  L+  
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L + GK   A K+ +  L +   +++ +Y  ++      G    A ++L K+ + G + D
Sbjct: 480 LCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539

Query: 621 WKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
            K+ + +I  L ++    + D+  +++R  ++RG
Sbjct: 540 AKTYEIIILSLFKK---DENDMAEKLLREMIARG 570



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 102/470 (21%), Positives = 200/470 (42%), Gaps = 26/470 (5%)

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           ++ ++Y++    ++    +D+A  LF  +  +N  P    +  ++   V  +     L +
Sbjct: 48  INFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYL 107

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQ 312
             +M+   +KPN V    L+   C  G +     V  ++++  Y+P  D   F  L+   
Sbjct: 108 SQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVP--DTITFTTLIKGL 165

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK----LVEKEI 368
           C  G +  A      ++ L    +   YG LI   CK      A+ LL +    LV+  +
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           ++            YN +I  +C      +A   F +++ KG+  D V ++ LI G    
Sbjct: 226 VM------------YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCIL 273

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G  + A ++   M    +  D   +  L+ ++ + G+  + KT  D M++ G  P    +
Sbjct: 274 GKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTY 333

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            S+M+       V  A  +  +M + GV  ++   + ++         +EA+     M +
Sbjct: 334 NSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR 393

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
              +P+   + SL+  LS+ G+   A++L+D    R     + +Y  +LDAL    +   
Sbjct: 394 KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDK 453

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           A ++L K+ +KG   +  +   LI GL Q G  + A    ++  G + +G
Sbjct: 454 AIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDA---RKVFEGLLVKG 500



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 115/235 (48%), Gaps = 1/235 (0%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
            K    A   F  + + G+ N D +++  MI    ++ K + A  +  +M +K +  D  
Sbjct: 343 VKEVNKAKSIFNTMAQGGV-NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            +  LI+   K G +  ++++ D M   GV  ++++Y+++   + +  +   A     K+
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
             +GI+P  +TY++++ G   S KLE A + FE +  +G +L+V TY  MI G+      
Sbjct: 462 KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLF 521

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           +EA  L ++M++    P   +Y  +I      +  D A ++  EM +  V+P  +
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQI 576


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 127/527 (24%), Positives = 221/527 (41%), Gaps = 63/527 (11%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  TH  +I  L +   +++A  +L  M   GV  ++  +  +I  Y   G  +E+ 
Sbjct: 147 FVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEAT 206

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K+F  M   G+   + S+++    + + GR   A   F  M ++G  P   TY ++L G+
Sbjct: 207 KMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGY 266

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
                    + FF  MK  GI  + + +  +I+ Y +   MDEA  + +EM+ + + P V
Sbjct: 267 ATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDV 326

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +Y+T+I     + R  DA+  F++M    V+PN V Y +L+ G C  G +V+ ++++ E
Sbjct: 327 FTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYE 386

Query: 292 MVERYIPPKD----NSV-------------------------------FMKLLGVQCKSG 316
           M+   IP  +    NS+                               F  L+   C  G
Sbjct: 387 MMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVG 446

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA-----------EMYDRAIK------- 358
            +  A  VL AMI   I  +   Y  L+  + K+           EM D+ IK       
Sbjct: 447 EMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYN 506

Query: 359 -LLDKLVEKEIILRPQSTL--------DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
            +LD L      +  Q  L         +   +YN +++ LC N  T +A + F++L   
Sbjct: 507 IILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTM 566

Query: 410 GV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
            V  +    N +I         + A ++   +   G+  +A  Y  +I + L++G   +A
Sbjct: 567 NVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEA 626

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
                SM + G +P S L    + +L E G +  A   M  +  K +
Sbjct: 627 DNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSI 673



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 143/632 (22%), Positives = 277/632 (43%), Gaps = 24/632 (3%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F + +V N    A+  E  L FF  + R GL   D+     +++ L    + + A  +LL
Sbjct: 9   FTYGVVMNGCCRARRPELGLAFFGRLLRTGL-KADKTAANTVLKCLCCTKRTDDAVKVLL 67

Query: 81  D-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGV-ERSVKSYDALFKLIL 137
             M + G   D   + ++++        Q+++ +  +M K+ GV    V +Y+ +     
Sbjct: 68  RRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFF 127

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G+   A   +++M+ +G  P   T+N ++     +  ++ A      M   G+  + V
Sbjct: 128 KEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKV 187

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TY +MI+GY+   + +EA K+F EM  + + P ++S+ + +       R+ +A  IF  M
Sbjct: 188 TYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSM 247

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            +   +PN VTY  LL G    G   ++      M    I   +  VF  L+    K G 
Sbjct: 248 AAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIV-ANCLVFTILIDAYAKRGM 306

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           ++ A  +L  M    +  +   Y  LI   C+      A+   ++++   +  +P + + 
Sbjct: 307 MDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGV--QPNTVV- 363

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEG---NPDS 432
                Y+ +IQ  C +G   KA+    ++M  G+  P    FN+++    KEG   +   
Sbjct: 364 -----YHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHH 418

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
            F++VK +G R    D   +  LI+ Y   GE   A + LD+MI  G  P +  + +++ 
Sbjct: 419 IFDLVKDIGERS---DIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVN 475

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--- 549
             F+ GR+     + + M +K +K        IL+ L   G    A   +  M+  G   
Sbjct: 476 GYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTV 535

Query: 550 SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           S+P ++ +L  L     T  A+ +       +   ++ +   +++++    +   A  + 
Sbjct: 536 SLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLF 595

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
             I + G V +  +   +I  L +EG+ ++AD
Sbjct: 596 SAISDSGLVPNASTYGIMIRNLLKEGSVEEAD 627



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/564 (22%), Positives = 240/564 (42%), Gaps = 29/564 (5%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  +I  + K+G + ++  ++  M Q G    V +++++   + +      A+    +M+
Sbjct: 119 YNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMV 178

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+ P + TY  M+ G+    + E A + F +M  RG+  D+V++N+ ++   +  +  
Sbjct: 179 DNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSK 238

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA ++F  M  K   P +++Y  ++ GY       D +  F+ MK   +  N + +T L+
Sbjct: 239 EAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILI 298

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
                 G M E   +L EM  + + P D   +  L+   C+ G L  A D    MI   +
Sbjct: 299 DAYAKRGMMDEAMLILSEMQGQGLSP-DVFTYSTLISALCRMGRLADAVDKFNQMIGTGV 357

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  LI+ FC      +A +L+ +++   I  RP          +N ++  +C  
Sbjct: 358 QPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIP-RPNIAF------FNSIVHSICKE 410

Query: 394 GQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+   A   F  +   G   D + FN LI G+   G    AF ++  M   G+  D   Y
Sbjct: 411 GRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTY 470

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L+  Y + G   D       M +    P +  +  +++ LF  GR   A +++  M+ 
Sbjct: 471 NTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIG 530

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
            G   +L     IL+ L      +EA+    +M Q     N    ++ L+    ++  V+
Sbjct: 531 CGTTVSLPTYNIILKGLCRNNCTDEAI----VMFQKLCTMNVKFNITTLNTMINSMYTVQ 586

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA--YSILFKIMEKGGVTDWKSSDKLIAG 630
                  R+   DL S      A+  +G   NA  Y I+ + + K G  +   +D + + 
Sbjct: 587 R------REEAKDLFS------AISDSGLVPNASTYGIMIRNLLKEGSVE--EADNMFSS 632

Query: 631 LNQEGNTKQADILSRMIRGEMSRG 654
           + + G    + +L+  IR  + +G
Sbjct: 633 MEKSGCAPCSRLLNDTIRTLLEKG 656



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/542 (21%), Positives = 222/542 (40%), Gaps = 13/542 (2%)

Query: 16  ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERA-GLFNHDRETHLKMIEILGRVGKLN 73
             VP  F + +V   L     S+ AL   R + +  G+ + D  T+  +I    + GK+ 
Sbjct: 74  GCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIG 133

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +  +M ++G   D      +I +  K   V  +  +   M   GV  +  +Y ++ 
Sbjct: 134 KACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMI 193

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
                 GR+  A + F +M   G+ P   ++N  +       + + A   F  M ++G  
Sbjct: 194 HGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHR 253

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            ++VTY  +++GY       +    F  MK   I    + +T +I  Y      D+A+ I
Sbjct: 254 PNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLI 313

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
             EM+   + P+  TY+ L+  LC  G++ +      +M+   + P +  V+  L+   C
Sbjct: 314 LSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQP-NTVVYHSLIQGFC 372

Query: 314 KSGHLNAAADVLKAMIRLSIP-TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
             G L  A +++  M+   IP      +  ++ + CK      A  + D  + K+I  R 
Sbjct: 373 THGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFD--LVKDIGERS 430

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
              +      +N +I   C  G+ GKA      ++  G+  D   +N L+ G+ K G  D
Sbjct: 431 DIIM------FNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRID 484

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
               + + M  + +      Y  +++   R G    A+  L  MI  G + +   +  ++
Sbjct: 485 DGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIIL 544

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           + L  +     A  + + +    VK N+  +  ++ ++      EEA      +  SG V
Sbjct: 545 KGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLV 604

Query: 552 PN 553
           PN
Sbjct: 605 PN 606



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 109/485 (22%), Positives = 211/485 (43%), Gaps = 17/485 (3%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK- 217
           PT  TY V++ G   + + E  + FF  +   G+  D    NT++      K+ D+A K 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD--VKPNAVTYTALLPG 275
           L   M E    P   SY  ++K      R+  AL +   M   +    P+ VTY  ++ G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
               GK+ +   +  EM+++   P D      ++   CK+  ++ A  +L+ M+   +P 
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVP-DVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  +I  +     ++ A K+  ++  + +I  P      +  S+N  +  LC +G+
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLI--P------DIVSWNSFMDSLCKHGR 236

Query: 396 TGK-AEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
           + + AEIF+    K    + V +  L+ G++ EG           M   G+  +   +  
Sbjct: 237 SKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTI 296

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI++Y ++G   +A   L  M   G SP    + +++ +L   GR+  A      M+  G
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG 356

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-SVPN---FDSLLSVLSEKGKTIAA 570
           V+ N  +   +++     G + +A   +  MM +G   PN   F+S++  + ++G+ + A
Sbjct: 357 VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDA 416

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             + D         D+  +  ++D     G+   A+S+L  ++  G   D  + + L+ G
Sbjct: 417 HHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNG 476

Query: 631 LNQEG 635
             + G
Sbjct: 477 YFKSG 481


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 146/563 (25%), Positives = 249/563 (44%), Gaps = 49/563 (8%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
            L G    E A Q  + + R G F  D  T+ K+I  L +  K+  +  +  +M + GV 
Sbjct: 426 CLCGVGKFEKAFQILKEMMRKG-FVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVN 484

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            D   + +LI+S+ K G+++++   FD M+ +G   +V +Y AL    L+  + + A   
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDI 544

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F++M+     P   TY+ ++ G   + +++ A   +E  K  G S +V            
Sbjct: 545 FHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYE--KLIGTSGNV------------ 590

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
                E++  F       I P V++Y  +I G    ++  DA  + D M +   +PN + 
Sbjct: 591 -----ESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIV 645

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           Y AL+ G C  GK+   Q+V   M +  Y+P      +  L+    K G L+ A  VL  
Sbjct: 646 YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHT--YTSLIDRMFKDGRLDLAMKVLSE 703

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M+  S       Y  +I+   K    ++A+ LL  + EK     P         +Y  +I
Sbjct: 704 MLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGC--SPNVV------TYTALI 755

Query: 388 QHLCHNGQTGKAEI---FFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
             L   G+TGKA+     F+Q+  KG   + V +  LI      G  D A  ++  M   
Sbjct: 756 DGL---GKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHT 812

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
             P+    Y C ++ + +K     +   L+ M      P + ++  +++S  + GR++TA
Sbjct: 813 HWPKHLQGYHCAVQGFSKKF--IASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETA 870

Query: 504 SRVMKSMVEKGVKENLD---LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             + K +VE     N+    + A +++AL +   VEEA      M + G VP+   F SL
Sbjct: 871 LELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSL 930

Query: 558 LSVLSEKGKTIAAVKLLDFCLGR 580
           +  L E  K   A++L   C GR
Sbjct: 931 VKGLIEVNKWDEALQL---CYGR 950



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 211/478 (44%), Gaps = 32/478 (6%)

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G++  A +   +M+ +G  P   TY  ++     + K+E +   F++MK  G++ DV TY
Sbjct: 431 GKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTY 490

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
             +I+ + +   +++A   F EM+     P V++YT ++  Y+  ++   A  IF  M  
Sbjct: 491 TILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVD 550

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               PNAVTY+AL+ GLC AG   E+QK                V+ KL+G    SG  N
Sbjct: 551 AACYPNAVTYSALIDGLCKAG---EIQKACE-------------VYEKLIGT---SG--N 589

Query: 320 AAADV-LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             +D   +     +I      YG LI+  CKA+    A +LLD ++       P   +  
Sbjct: 590 VESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGC--EPNQIV-- 645

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIV 437
               Y+ +I   C  G+   A+  F ++ K G L  V  + +LI    K+G  D A +++
Sbjct: 646 ----YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M       +   Y  +I+   + GE   A   L  M E G SP    + ++++ L + 
Sbjct: 702 SEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKT 761

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
           G+   + ++ K M  KG   N      ++      G ++EA   +D M  +    +    
Sbjct: 762 GKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGY 821

Query: 558 -LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
             +V     K IA++ LL+     + +     Y  ++D+   AG+   A  +  +++E
Sbjct: 822 HCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 135/618 (21%), Positives = 238/618 (38%), Gaps = 84/618 (13%)

Query: 44  RWVERAGL-----FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           RW +   +     FN D     +MI  L      N A   L  M       +   +  L+
Sbjct: 254 RWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLL 313

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             + KK       +I ++M   G   +   +++L       G Y  A + FN+M + G  
Sbjct: 314 SGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSP 373

Query: 159 PTRHTYNVMLWGFFLSLKLETAI------RFFEDMKSRGISLDVVT---YNTMINGYNRF 209
           P    YN+ +       +L  A       + +E+M +    L+ V    ++  + G  +F
Sbjct: 374 PGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKF 433

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
           +K   A ++  EM  K   P   +YT +I      ++ + +  +F EMK   V P+  TY
Sbjct: 434 EK---AFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTY 490

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAM 328
           T L+   C AG + + +    EM  R +    N V +  LL    KS  L  A D+   M
Sbjct: 491 TILIDSFCKAGLIEQARSWFDEM--RSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM 548

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +  +    A  Y  LI+  CKA    +A ++ +KL+                        
Sbjct: 549 VDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLI------------------------ 584

Query: 389 HLCHNGQTGKAEI-FFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
                G +G  E  F+ +      + P  V +  LI G  K      A E++  M   G 
Sbjct: 585 -----GTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGC 639

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             +   Y  LI+ + + G+  +A+     M + G+ P+   + S+++ +F+DGR+  A +
Sbjct: 640 EPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKG 565
           V+  M+      N+     +++ L   G +E+AL  + LM + G  PN            
Sbjct: 700 VLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPN------------ 747

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
                               + +Y  ++D L   GK   +  +  ++  KG   ++ +  
Sbjct: 748 --------------------VVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYR 787

Query: 626 KLIAGLNQEGNTKQADIL 643
            LI      G   +A +L
Sbjct: 788 VLINHCCAAGLLDEAHLL 805



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 135/640 (21%), Positives = 255/640 (39%), Gaps = 74/640 (11%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           + E  ++FF W ER   ++H    +  + EILG       A  +L ++ +   +    + 
Sbjct: 113 SPELCVRFFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLL 172

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            VL+    + G+  E+++    +K  G   S  +Y+AL +++   G+  M  R   +M +
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G    R T            +   A+   E       +LD V    MI+G       +E
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLE---KEDFNLDTVLCTQMISGLMEASLFNE 289

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A      M+  +  P V++Y T++ G++  ++     RI + M +    PN   + +L+ 
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G C+AG      K+   M     PP                G++                
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTCGSPP----------------GYVA--------------- 378

Query: 335 TEAGHYGILIENFC------KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
                Y I I + C       AE+ D   K+ ++++    +L   +T +          +
Sbjct: 379 -----YNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFS--------R 425

Query: 389 HLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G+  KA    +++M+KG V D   +  +I    +    + +F + + M R GV  
Sbjct: 426 CLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNP 485

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  LI+S+ + G    A++  D M   G SP    + +++ +  +  ++  A  + 
Sbjct: 486 DVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIF 545

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID-LMMQSGSV--------------- 551
             MV+     N    + +++ L   G +++A    + L+  SG+V               
Sbjct: 546 HRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIA 605

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           PN   + +L+  L +  K   A +LLD  L   C  +   Y+ ++D     GK  NA  +
Sbjct: 606 PNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV 665

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
             ++ + G +    +   LI  + ++G    A  +LS M+
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML 705


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 231/486 (47%), Gaps = 14/486 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F +L+ ++  KG + +++     M+  G+     +Y+ L     R+G    A+    +M 
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +GI PT+ TYN ++  F     ++ A +  E M + G   D+ TYN +  G  +  K+D
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVD 330

Query: 214 EAEKLFAEMKEKNIE-PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           EA +L  EM+  +   P V++Y T++        + DALR+ +EM+   VKP  VT+  +
Sbjct: 331 EAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  GK+ E    L ++ E  + P D   +  L+   CK+G++  A  ++  M+   
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAP-DVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +      ++ N CK + Y+ A +LL           PQ     +  SY  ++     
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHS--------PPQRGFVPDEVSYGTVMAAYFK 501

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                 A   + Q++++ ++  ++ +N LI+G  +      A + +  +  +G+  D   
Sbjct: 502 EYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETT 561

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  +I +Y ++G+  +A    + M+E+   P      ++M  L   G++  A ++ +S V
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           EKG K ++     +++++   G V+ AL   D M   G  P+   ++ +LS LSE G++ 
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681

Query: 569 AAVKLL 574
            A  +L
Sbjct: 682 EAHNML 687



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 139/576 (24%), Positives = 262/576 (45%), Gaps = 31/576 (5%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L  A   L  M   G+  D   +  L+ ++ +KG++ E+  +   MK+ G+  +  +Y
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     R G    A +    M + G EP   TYNV+  G   + K++ A R  ++M+ 
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMER 341

Query: 190 RGISL-DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
              +L DVVTYNT+++   +++   +A +L  EM++K ++PT++++  ++K      + +
Sbjct: 342 LSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLE 401

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +AL   +++    + P+ +TY  L+   C AG + +   ++ EMV + +   D      +
Sbjct: 402 EALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL-KMDTFTLNTV 460

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           L   CK      A ++L +  +     +   YG ++  + K    + A++L D+++E+++
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKE 427
           I           S+YN +I+ LC   +  +A     +L++KG V D   +N +I  + KE
Sbjct: 521 I--------PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKE 572

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G+ ++AF     M       D      L+      G+   A    +S +E G       +
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++++S+ + G V TA      M  KG++ +      +L AL   G  EEA   +  +  
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692

Query: 548 SGSV----------PNFDSLLSVLSEKGKTIA--AVKLLDFCLGRDCIIDLASYEKVLDA 595
           SG +          P+      V   +GK  A  + K  D          L +Y + L+ 
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNA--------LETYMERLNG 744

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           L   G+   A ++L ++M+KG   D  +   L+ GL
Sbjct: 745 LCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGL 780



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 130/574 (22%), Positives = 249/574 (43%), Gaps = 60/574 (10%)

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY--FNKMLSEGIEPTRHTYNVMLWG 170
           +  + ++ GV  S+++ +A+   + R    +       F  ++   + P  +T+N+++  
Sbjct: 158 LHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
                 L  A+     M+  G+S D VTYNT++N + R   + EA  L A MK   I PT
Sbjct: 218 HCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPT 277

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE------ 284
             +Y T++  +  +     A ++ + M ++  +P+  TY  L  GLC AGK+ E      
Sbjct: 278 QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKD 337

Query: 285 ------------------------------VQKVLREMVERYIPPK--DNSVFMKLLGVQ 312
                                           ++L EM ++ + P    +++ +K L   
Sbjct: 338 EMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSL--- 394

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           CK G L  A   L+ +    +  +   Y  LI+ +CKA    +A  L+D++V K      
Sbjct: 395 CKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK------ 448

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPD 431
              L M+  + N ++ +LC   +   AE       ++G V D V++  ++  + KE NP+
Sbjct: 449 --GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPE 506

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A  +   M  R +      Y  LI+   R     +A   L+ ++E G  P  + +  ++
Sbjct: 507 PALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIII 566

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-- 549
            +  ++G ++ A R    MVE   K ++     ++  L + G +++AL   +  ++ G  
Sbjct: 567 HAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKK 626

Query: 550 -SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
             V  +++L+  + + G    A+   D    +    D  +Y  VL AL  AG++  A+++
Sbjct: 627 VDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNM 686

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADI 642
           L K+ + G     K S      L +  +  +AD+
Sbjct: 687 LHKLADSG-----KLSQSFACPLLKPSSADEADV 715



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 136/593 (22%), Positives = 239/593 (40%), Gaps = 122/593 (20%)

Query: 20  QFDHNLVYNVLHGAKNS-EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
            +  NL+ +  H +K +   AL     ++  GL + D  T+  ++    R G L  AR +
Sbjct: 208 HYTFNLLVHT-HCSKGTLADALATLSTMQGFGL-SPDAVTYNTLLNAHCRKGMLGEARAL 265

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           L  M + G+   +  +  L+ ++ + G ++++ K+ + M   G E  +++Y+ L   + +
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQ 325

Query: 139 RGRY------------------------------------MMAKRYFNKMLSEGIEPTRH 162
            G+                                       A R   +M  +G++PT  
Sbjct: 326 AGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR-------FKKMDE- 214
           T+N+++       KLE A+   E +   G++ DV+TYNT+I+ Y +       F  MDE 
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 215 ---------------------------AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
                                      AE+L     ++   P  +SY T++  Y      
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           + ALR++D+M    + P+  TY  L+ GLC   ++ E    L E+VE+ + P D + +  
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVP-DETTYNI 564

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++   CK G L  A      M+  S   +      L+   C     D+A+KL +  VEK 
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK- 623

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF--NNLIRGHS 425
                     ++  +YN +IQ +C  G    A  FF  +  KG L P AF  N ++   S
Sbjct: 624 -------GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG-LQPDAFTYNVVLSALS 675

Query: 426 KEGNPDSAFEIVKIMGRRGV-----------PRDAD------------------AYICLI 456
           + G  + A  ++  +   G            P  AD                  A    +
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735

Query: 457 ESYLRK-------GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           E+Y+ +       G+  +AK  LD M++ G    SS + ++ME L +  + QT
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQT 788


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 217/459 (47%), Gaps = 15/459 (3%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+  ++ +++ L       G    A   F K+L  G  PT  T+N ++ G  L+ KL+ A
Sbjct: 89  GITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEA 148

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           + F + + + G  LD V+Y T+ING  +  +   A ++  +++ K +   V+ Y  +I  
Sbjct: 149 LHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS 208

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +   DA +++ EM +  + P+ VT+ +L+ G C  G++ E   +  EMV + I P 
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINP- 267

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  L+   CK G++  A ++L  M++  +  +   Y  L++ +C     ++A  + 
Sbjct: 268 DVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVF 327

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
             +    + + P       A SYN MI  L       +A   F+++  KG+  D V +N+
Sbjct: 328 STM--SRLGVAPH------AHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNS 379

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED- 478
           LI G  K G    A+++V  M   G+P D   Y  LI+  L K    D   AL   I+D 
Sbjct: 380 LIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDV-LCKNHHIDKAIALVKKIKDQ 438

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P+   +  +++ L + GR++ A  V + ++ KG   N      ++  L   G   EA
Sbjct: 439 GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEA 498

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
              +  M  +G +P+   +++++  L  K +   A KLL
Sbjct: 499 EVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLL 537



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 209/455 (45%), Gaps = 10/455 (2%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           KG+      F +L+  Y   G +  +  IF  + +LG   +  +++ L   I   G+   
Sbjct: 88  KGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKE 147

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  + + +++ G    + +Y  ++ G     +   A++  + ++ + ++ DVV YN +IN
Sbjct: 148 ALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIIN 207

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              + K + +A +L++EM  K I P V+++ ++I G+  V +  +A  +F EM   ++ P
Sbjct: 208 SLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINP 267

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           +  T++ L+  LC  G +   + +L  M+++ + P D   +  L+   C    +N A  V
Sbjct: 268 DVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIP-DVVTYSSLMDGYCLVNEVNKAKHV 326

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              M RL +   A  Y I+I    K +M D A+ L  ++  K I   P +       +YN
Sbjct: 327 FSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGI--APDTV------TYN 378

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I  LC  G+   A     ++   G+  D + +N+LI    K  + D A  +VK +  +
Sbjct: 379 SLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ 438

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+      Y  LI+   + G   +A+     ++  G+S  +  +  ++  L ++G    A
Sbjct: 439 GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEA 498

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
             ++  M   G+  +      I+ AL  +   E+A
Sbjct: 499 EVLLSKMENNGIIPDAVTYETIIRALFRKDENEKA 533



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 197/408 (48%), Gaps = 11/408 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL F   V   G F+ D+ ++  +I  L ++G+   A  +L  +  K V  D  M+ ++I
Sbjct: 148 ALHFHDHVIALG-FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIII 206

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            S  K   V ++ +++  M    +   V ++++L       G+   A   F++M+ + I 
Sbjct: 207 NSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNIN 266

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P  +T+++++        +  A      M  +G+  DVVTY+++++GY    ++++A+ +
Sbjct: 267 PDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHV 326

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F+ M    + P   SY  MI G   ++  D+AL +F EM    + P+ VTY +L+ GLC 
Sbjct: 327 FSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCK 386

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G++    +++ EM    IP  D   +  L+ V CK+ H++ A  ++K +    I     
Sbjct: 387 LGRISYAWQLVDEMHNNGIPA-DILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMY 445

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y ILI+  CK      A  +   L+ K           + A +YN MI  LC  G   +
Sbjct: 446 TYNILIDGLCKGGRLKNAQDVFQDLLIK--------GYSVNAWTYNIMINGLCKEGLFNE 497

Query: 399 AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           AE+   ++   G++ D V +  +IR   ++   + A ++++ M  RG+
Sbjct: 498 AEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 189/395 (47%), Gaps = 10/395 (2%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G   D+  +  LI    K G  + ++++   ++   V   V  Y+ +   + +      A
Sbjct: 159 GFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDA 218

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            + +++M+++ I P   T+N ++ GF +  +L+ A   F +M  + I+ DV T++ +++ 
Sbjct: 219 YQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDA 278

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +   +  A+ + A M ++ + P V++Y++++ GY  V   + A  +F  M    V P+
Sbjct: 279 LCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPH 338

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
           A +Y  ++ GL     + E   + +EM  + I P D   +  L+   CK G ++ A  ++
Sbjct: 339 AHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP-DTVTYNSLIDGLCKLGRISYAWQLV 397

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             M    IP +   Y  LI+  CK    D+AI L+ K+ ++ I  +P         +YN 
Sbjct: 398 DEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGI--QPS------MYTYNI 449

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I  LC  G+   A+  F+ L+ KG  ++   +N +I G  KEG  + A  ++  M   G
Sbjct: 450 LIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNG 509

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +  DA  Y  +I +  RK E   A+  L  MI  G
Sbjct: 510 IIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 177/374 (47%), Gaps = 10/374 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           ALQ  + +E   L N D   +  +I  L +   ++ A  +  +M  K +  D   F  LI
Sbjct: 183 ALQMLKKIE-GKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLI 241

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             +   G ++E+  +F  M    +   V ++  L   + + G    AK     M+ +G+ 
Sbjct: 242 LGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVI 301

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TY+ ++ G+ L  ++  A   F  M   G++    +YN MING  + K +DEA  L
Sbjct: 302 PDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSL 361

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F EM  K I P  ++Y ++I G   + R   A ++ DEM +  +  + +TY +L+  LC 
Sbjct: 362 FKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCK 421

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
              + +   +++++ ++ I P   +  + + G+ CK G L  A DV + ++       A 
Sbjct: 422 NHHIDKAIALVKKIKDQGIQPSMYTYNILIDGL-CKGGRLKNAQDVFQDLLIKGYSVNAW 480

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y I+I   CK  +++ A  LL K+    II  P      +A +Y  +I+ L    +  K
Sbjct: 481 TYNIMINGLCKEGLFNEAEVLLSKMENNGII--P------DAVTYETIIRALFRKDENEK 532

Query: 399 AEIFFRQLMKKGVL 412
           AE   R+++ +G+L
Sbjct: 533 AEKLLREMIIRGLL 546



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 11/252 (4%)

Query: 305 FMKLLG--VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           F K+LG  V+  + H   A  +   +    I      + IL+  +C       A  +  K
Sbjct: 60  FNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAK 119

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLI 421
           +++  +   P +       ++N +I  +C NG+  +A  F   ++  G  LD V++  LI
Sbjct: 120 ILK--LGYHPTTI------TFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLI 171

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G  K G   +A +++K +  + V  D   Y  +I S  +    +DA      MI    S
Sbjct: 172 NGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRIS 231

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P    F S++      G+++ A  +   MV K +  ++   + +++AL   G++  A   
Sbjct: 232 PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNM 291

Query: 542 IDLMMQSGSVPN 553
           + +MM+ G +P+
Sbjct: 292 LAVMMKQGVIPD 303



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 66/140 (47%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I++L +   ++ A  ++  +  +G+Q     + +LI+   K G ++ +  +F
Sbjct: 408 DILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVF 467

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             +   G   +  +Y+ +   + + G +  A+   +KM + GI P   TY  ++   F  
Sbjct: 468 QDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRK 527

Query: 175 LKLETAIRFFEDMKSRGISL 194
            + E A +   +M  RG+ L
Sbjct: 528 DENEKAEKLLREMIIRGLLL 547


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/490 (23%), Positives = 220/490 (44%), Gaps = 16/490 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L +   ++ A  +L  M + G + +   +  LI  Y   G+  ESV++F
Sbjct: 279 DLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 338

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN-----VMLW 169
             M   GV  +V + ++    + + GR   AK  F+ M+ +G +P   +Y+     V  W
Sbjct: 339 KQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYW 398

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
             ++++        F  M ++GI+ +   +N +IN Y R   MD+A  +F +M+ K + P
Sbjct: 399 --YVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 456

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
             +++ T+I     + R DDAL  F+ M    V P+   Y  L+ G C+ G++V+ ++++
Sbjct: 457 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 516

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            EM+ + IPP     F  ++   CK G +    D++  M++         +  L+E +C 
Sbjct: 517 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 576

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
               + A  LLD +    I + P   +      Y  ++   C NG+   A   FR ++ K
Sbjct: 577 VGNMEEAFALLDAMAS--IGIEPNCYI------YGTLVDGYCKNGRIDDALTVFRDMLHK 628

Query: 410 GV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           GV    V ++ ++ G  +     +A ++   M   G       Y  ++    R     +A
Sbjct: 629 GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEA 688

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
              L+ +           F  V+ ++F+ GR Q A  +  ++   G+  N+   + ++  
Sbjct: 689 NMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 748

Query: 529 LLMRGHVEEA 538
           L+     EEA
Sbjct: 749 LIKEESYEEA 758



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 144/616 (23%), Positives = 273/616 (44%), Gaps = 21/616 (3%)

Query: 39  ALQFFRWVERAGLFNHDR---ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           A++ F+ ++R     H      T+  +I+   RV + +    I+  + K G+  D D   
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPD-DFSY 214

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI  + K G V ++  +F  M + GV   +   +++ K + +      A+    KM+  
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           GI P   TY++++ G   S  ++ A R  E M   G   + +TYN++I+GY+     +E+
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            ++F +M    + PTV +  + I       R ++A  IFD M     KP+ ++Y+     
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASW 394

Query: 276 LCD---AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +C        V    +   M+ + I P +  VF  L+    + G ++ A  + + M    
Sbjct: 395 VCYWYVTVVWVMWHNIFNLMLTKGIAP-NKHVFNILINAYARCGMMDKAMLIFEDMQNKG 453

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   +  +I + C+    D A+   + +V  +I + P   +      Y  +IQ  C+
Sbjct: 454 MIPDTVTFATVISSLCRIGRLDDALHKFNHMV--DIGVPPSEAV------YGCLIQGCCN 505

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           +G+  KA+    ++M K +  P    F+++I    KEG      +I+ +M + G   +  
Sbjct: 506 HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVV 565

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +  L+E Y   G   +A   LD+M   G  P   ++ ++++   ++GR+  A  V + M
Sbjct: 566 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 625

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKT 567
           + KGVK    L + IL  L        A      M++SG   S+  +  +L  L     T
Sbjct: 626 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCT 685

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A  LL+     +   D+ ++  V+ A+   G+   A  +   I   G V + ++   +
Sbjct: 686 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 745

Query: 628 IAGLNQEGNTKQADIL 643
           I  L +E + ++AD L
Sbjct: 746 ITNLIKEESYEEADNL 761



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 92/186 (49%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VG +  A  +L  M   G++ +  ++  L++ Y K G + +++ +F  M   GV+ +   
Sbjct: 577 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 636

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  +   + +  R   AK+ F++M+  G   + HTY V+L G   +   + A    E + 
Sbjct: 637 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 696

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  +  D++T+N +I+   +  +  EA++LF  +    + P + +Y+ MI   +  E  +
Sbjct: 697 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 756

Query: 249 DALRIF 254
           +A  +F
Sbjct: 757 EADNLF 762


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 188/421 (44%), Gaps = 11/421 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G   +   + VL++   K+G+  +++K+FD M + G+   VK Y  L   +   GR
Sbjct: 205 MVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGR 264

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A R    M   G  P   TY V L G   + +++ A   FE ++  G +L ++ Y+ 
Sbjct: 265 IEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSC 324

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G  +  + DE    + EM  K+I P +  YT +I+ +    R  DA  + DEMK   
Sbjct: 325 LIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKG 384

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             P+   Y  LL  L D G +   Q ++ EM++  +     +  + + G+ CK G ++ A
Sbjct: 385 FVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGL-CKKGLIDKA 443

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL-------VEKEIILRPQS 374
             V   M           Y  LI+   +A M + A  L  K+       +   + L    
Sbjct: 444 MQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQ 503

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
             D E  S   ++  +C +GQ  KA    R +++ GV+ D V +N LI G  K  N D A
Sbjct: 504 VRDTE--SLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGA 561

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             + K +  +G+  D   Y  LI+   R     DA     +++  G  P+  ++ ++M S
Sbjct: 562 LRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRS 621

Query: 494 L 494
           L
Sbjct: 622 L 622



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 166/381 (43%), Gaps = 21/381 (5%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D + +  ++  L   G++  A  +L  M + G   DE  + V +    K G V E+   F
Sbjct: 248 DVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRF 307

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           ++++  G    +  Y  L   + + GR+     Y+ +ML + I P    Y +++  F  +
Sbjct: 308 ELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEA 367

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + + A    ++MK +G   D   YNT++        +D A+ L +EM + N+     ++
Sbjct: 368 GRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTH 427

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             MI G       D A+++FDEM      P  +TY AL+ GL  AG + E + +  +M  
Sbjct: 428 NIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEM 487

Query: 295 RYIPP------------KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
              P             +D     KL+   C+SG +  A  +L+ +I   +  +   Y  
Sbjct: 488 GNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNT 547

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           LI   CKA+  D A++L  +L  K I   P         +Y  +I  L    +   A + 
Sbjct: 548 LINGLCKAKNLDGALRLFKELQLKGI--SPDEI------TYGTLIDGLWRAHRENDATML 599

Query: 403 FRQLMKKGVLDPVA-FNNLIR 422
           F+ +++ G    +  +N ++R
Sbjct: 600 FQNILRSGGFPSLPIYNTMMR 620



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 194/474 (40%), Gaps = 65/474 (13%)

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           D ++ G+      +  ++  ++   +  EA + F+ M + +  PT   Y  + +  V V+
Sbjct: 134 DARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQ--VLVD 191

Query: 246 RADD--ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
           R     AL +++ M S    PN+ TY  L+ GLC  G  V+  K+  EM+ER I P D  
Sbjct: 192 RGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVP-DVK 250

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
           ++  LL   C  G +  A  +L +M                EN C  +            
Sbjct: 251 IYTVLLSSLCNEGRIEDAGRLLCSMK---------------ENGCPPD------------ 283

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIR 422
              E+             +Y   +  LC  G+  +A   F  L   G  L  + ++ LI 
Sbjct: 284 ---EV-------------TYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLID 327

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  + G  D        M  + +  D   Y  LI  +   G   DA   LD M + G  P
Sbjct: 328 GLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVP 387

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            +  + +++++LF+ G +  A  +M  M++  V  +      ++  L  +G +++A+   
Sbjct: 388 DTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVF 447

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL-------------LDFCLGRDCIIDL 586
           D M + G  P    +++L+  L   G    A  L             L   LG + + D 
Sbjct: 448 DEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDT 507

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            S  K++D +  +G+ L AY +L  I+E G V D  + + LI GL +  N   A
Sbjct: 508 ESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGA 561



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 4/223 (1%)

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  +   M   G   ++  YI L++   ++G   DA    D M+E G  P   ++  ++ 
Sbjct: 198 ALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLS 257

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--- 549
           SL  +GR++ A R++ SM E G   +       L  L   G V+EA  R +L+   G   
Sbjct: 258 SLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTL 317

Query: 550 SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
            +  +  L+  L + G+    +      LG+    D+  Y  ++     AG+T +A+ +L
Sbjct: 318 GLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLL 377

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEM 651
            ++ +KG V D    + L+  L   GN  +A  ++S M++  +
Sbjct: 378 DEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNV 420



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 137/346 (39%), Gaps = 53/346 (15%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           A+   +  LQN +  ++    HN++   L      + A+Q F  +   G  +    T+  
Sbjct: 408 AQSLMSEMLQNNV--VLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGC-HPTVMTYNA 464

Query: 62  MIEILGRVGKLNHARCILLDM-----PKKGVQW--------DEDMFEVLIESYGKKGIVQ 108
           +I+ L R G L  AR +   M     P   ++         D +    L++   + G V 
Sbjct: 465 LIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVL 524

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           ++ K+   + + GV   V +Y+ L   + +      A R F ++  +GI P   TY  ++
Sbjct: 525 KAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLI 584

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM--KEKN 226
            G + + +   A   F+++   G    +  YNTM+    R KK+ +A  L+ +   K+ N
Sbjct: 585 DGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYN 644

Query: 227 IEP--TVIS--------------------------------YTTMIKGYVAVERADDALR 252
           + P   VI+                                YT  + G   V + DDALR
Sbjct: 645 LSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALR 704

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLC-DAGKMVEVQKVLREMVERYI 297
           IF  ++ F +         L+  LC D      V  ++  + +R+I
Sbjct: 705 IFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFI 750



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 7/189 (3%)

Query: 458 SYLRKGEPADAKTALDSMIED---GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           S L   EP DA    D++ +    G    S+ FR+++ +    GR Q A      M +  
Sbjct: 116 SVLLASEP-DAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFD 174

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
            +    +   + + L+ RG +  AL   + M+ SG +PN   +  L+  L ++G  + A+
Sbjct: 175 CRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDAL 234

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           K+ D  L R  + D+  Y  +L +L   G+  +A  +L  + E G   D  +    ++GL
Sbjct: 235 KMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGL 294

Query: 632 NQEGNTKQA 640
            + G   +A
Sbjct: 295 CKAGRVDEA 303


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 204/474 (43%), Gaps = 12/474 (2%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           A+  E A    R +E         +TH  ++  L + GK+  A          G   D  
Sbjct: 107 AREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIH 166

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            +  +++   K   +Q++V + + +   G   ++ +Y+AL   + + GR   A     K+
Sbjct: 167 TYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 226

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G  P   TY  ++ G     +   A + F++M  RG+ LD V Y  +I G  +  K+
Sbjct: 227 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKI 286

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            +A  ++  M  +   P V++ +TMI G     R   A+RIF  M++  + PN V Y+AL
Sbjct: 287 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 346

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GLC A KM    ++L +M + +  P D   +  L+   CKSG + AA      M+   
Sbjct: 347 IHGLCKARKMDCALEMLAQMKKAFCTP-DTITYNILIDGLCKSGDVEAARAFFDEMLEAG 405

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              +   Y IL+  FCKA   D A  + D +          S       +Y  +I  LC 
Sbjct: 406 CKPDVYTYNILVSGFCKAGNTDAACGVFDDM--------SSSHCSPNVVTYGTLISGLCK 457

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             Q  KA ++F+ + ++G   D   +++L+ G  K G  +    +   M R GV      
Sbjct: 458 RRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTR 517

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
              +   +L K    D   +L + I     P    + S++ +L +  +V   +R
Sbjct: 518 TRLIF--HLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISTLIKSAKVNPCTR 569



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/536 (21%), Positives = 227/536 (42%), Gaps = 53/536 (9%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVE--RAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           +   + V  +    K+++ A + F+ +   R G F H   T   ++++  R  +   A  
Sbjct: 22  EISTDAVVKIFQCLKDADLAWELFQCLSSPRFG-FQHSVHTGNALLDVFARTKRHREAGN 80

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL----GVERSVKSYDALF 133
           +L +        D + + VLI  Y    + +E  + F +++++    GV  S+K+++ + 
Sbjct: 81  LLKNELATTFLPDVETWNVLITGYC---LAREPEEAFAVIREMEEDYGVAPSLKTHNLVL 137

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G+ + A  +F    + G     HTY  ++     + K++ A+   E + + G +
Sbjct: 138 HGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCT 197

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
             + TYN ++NG  +  +++EA  L  ++ +    P V++YT++I G    +R+ +A ++
Sbjct: 198 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 257

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F EM    +  + V YTAL+ GL  AGK+ +   V + M  +   P D      ++   C
Sbjct: 258 FKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP-DVVTLSTMIDGLC 316

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K+G + AA  + K+M    +      Y  LI   CKA   D A+++L ++  K+    P 
Sbjct: 317 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM--KKAFCTP- 373

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSA 433
                                                  D + +N LI G  K G+ ++A
Sbjct: 374 ---------------------------------------DTITYNILIDGLCKSGDVEAA 394

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
                 M   G   D   Y  L+  + + G    A    D M     SP    + +++  
Sbjct: 395 RAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISG 454

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           L +  ++  AS   + M E+G   +  + + +++ L   G +E      D M +SG
Sbjct: 455 LCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 510



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 160/368 (43%), Gaps = 12/368 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + N L      E A+   R +   G    D  T+  +I+ LG+  +   A  +  +M
Sbjct: 203 YNALLNGLCKMGRLEEAIDLLRKIVDNGC-TPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G+  D   +  LI    + G + ++  ++  M   G    V +   +   + + GR 
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R F  M + G+ P    Y+ ++ G   + K++ A+     MK    + D +TYN +
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 381

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +   ++ A   F EM E   +P V +Y  ++ G+      D A  +FD+M S   
Sbjct: 382 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHC 441

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN VTY  L+ GLC   ++ +     + M ER  PP D+ V+  L+   CKSG L    
Sbjct: 442 SPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPP-DSFVYSSLVDGLCKSGKLEGGC 500

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +   M R  +         LI + CKA   D A+ L +  + KE +  P         +
Sbjct: 501 MLFDEMERSGVANSQTRTR-LIFHLCKANRVDEAVSLFNA-IRKEGMPHPY--------A 550

Query: 383 YNPMIQHL 390
           YN +I  L
Sbjct: 551 YNSIISTL 558



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 130/560 (23%), Positives = 225/560 (40%), Gaps = 65/560 (11%)

Query: 111 VKIFDIMK---------------QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           VKIF  +K               + G + SV + +AL  +  R  R+  A       L+ 
Sbjct: 29  VKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELAT 88

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK-SRGISLDVVTYNTMINGYNRFKKMDE 214
              P   T+NV++ G+ L+ + E A     +M+   G++  + T+N +++G  +  K+  
Sbjct: 89  TFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLA 148

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A   F           + +YT ++      ++  DA+ + +++ +    P   TY ALL 
Sbjct: 149 AMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLN 208

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GL                                    CK G L  A D+L+ ++     
Sbjct: 209 GL------------------------------------CKMGRLEEAIDLLRKIVDNGCT 232

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   Y  LI+   K +    A KL      KE+ LR    L ++   Y  +I+ L   G
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLF-----KEMALR---GLVLDTVCYTALIRGLLQAG 284

Query: 395 QTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +A   ++ +  +G V D V  + +I G  K G   +A  I K M  RG+  +   Y 
Sbjct: 285 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 344

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI    +  +   A   L  M +   +P +  +  +++ L + G V+ A      M+E 
Sbjct: 345 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 404

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G K ++     ++      G+ + A G  D M  S   PN   + +L+S L ++ +   A
Sbjct: 405 GCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKA 464

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
                    R C  D   Y  ++D L  +GK L    +LF  ME+ GV + ++  +LI  
Sbjct: 465 SLYFQHMKERGCPPDSFVYSSLVDGLCKSGK-LEGGCMLFDEMERSGVANSQTRTRLIFH 523

Query: 631 LNQEGNTKQADILSRMIRGE 650
           L +     +A  L   IR E
Sbjct: 524 LCKANRVDEAVSLFNAIRKE 543


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 137/625 (21%), Positives = 275/625 (44%), Gaps = 15/625 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+  +    A N + A +FF  ++  GL   D  ++  MI +L + G+L+ A  +   M
Sbjct: 255 YNVCIDCFGKAGNVDMAWKFFHELKSQGL-KPDDVSYTSMIWVLCKAGRLSEAEELFGQM 313

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +        +  +I  YG  G  + + K+ D +K+ G   SV S++++   + ++ + 
Sbjct: 314 ETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKV 373

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   F  M  +  EP   TYN+++    ++ K+E A    ++M+  G+  +++T N M
Sbjct: 374 DEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIM 432

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++   + KK + A ++F    ++   P  ++Y ++I G       DDA R+F+ M     
Sbjct: 433 VDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGH 492

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             N V YT+L+      G+  +  K+ +EM  R   P D ++    +    K+G +    
Sbjct: 493 NANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQP-DLTLLNTYMDCVFKAGDVEKGR 551

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            + + +       +   Y ILI    KA        +   +         Q    ++A +
Sbjct: 552 AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM--------KQQGFALDARA 603

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN ++   C +G+  KA     ++  K V   VA + ++I G +K    D A+ + +   
Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 663

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            +G+  +   Y  LI+ + + G   +A   L+ M++ G +P    + S+M++L +   + 
Sbjct: 664 SKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEIN 723

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A    +SM E     N    + ++  L       +A      M + G VPN   + +++
Sbjct: 724 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMI 783

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
           + L++ G    A  L +         D AS+  +++ +  A + + AY +  +   KG  
Sbjct: 784 AGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCR 843

Query: 619 TDWKSSDKLIAGLNQEGNTKQADIL 643
            + K+   L+  LN+    +QA ++
Sbjct: 844 INVKACISLLDALNKAECLEQAAVV 868



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 213/464 (45%), Gaps = 13/464 (2%)

Query: 3   ERAWTTRLQNKIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A+  R + +   L P     N++ + L  AK  E A + F    + G  N +  T+  
Sbjct: 408 EEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGC-NPNSVTYCS 466

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ LG+ G ++ A  +  +M   G   +  ++  LI ++   G  ++  KIF  M + G
Sbjct: 467 LIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRG 526

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            +  +   +     + + G     +  F  +   G  P   +Y++++ G   + +     
Sbjct: 527 CQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETS 586

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F  MK +G +LD   YN +++G+ +  K+D+A ++  EMK K + PTV +Y ++I G 
Sbjct: 587 SIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGL 646

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             ++R D+A  +F+E KS  ++ N + Y++L+ G    G++ E   +L EM+++ + P +
Sbjct: 647 AKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP-N 705

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+    K+  +N A    ++M  +        Y ILI   C+ + Y++A     
Sbjct: 706 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 765

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ-TGKAEIFFRQLMKKGVLDPVAFNNL 420
           ++ ++ ++  P         +Y  MI  L   G  T    +F R     G  D  +FN L
Sbjct: 766 EMQKQGLV--PNVV------TYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNAL 817

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           I G S       A+ + +    +G   +  A I L+++ L K E
Sbjct: 818 IEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDA-LNKAE 860



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/569 (20%), Positives = 253/569 (44%), Gaps = 17/569 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L R  +L+ A  ++  M +   +     + VLI +  +    + ++++   M+++G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E  V  +  L + + R GR   A    +++    +EP    YNV +  F  +  ++ A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +FF ++KS+G+  D V+Y +MI    +  ++ EAE+LF +M+ +   P   +Y TMI GY
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
            +  + ++A ++ D++K     P+ V++ ++L  L    K+ E   +   M +   P  +
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEP--N 390

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +S +  ++ + C +G +  A  +   M    +        I+++  CKA+ ++ A ++ +
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNL 420
              ++     P S       +Y  +I  L   G    A   F  ++  G   +PV + +L
Sbjct: 451 TASQRGC--NPNSV------TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSL 502

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           IR     G  +   +I K M RRG   D       ++   + G+    +   + +   G 
Sbjct: 503 IRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF 562

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE---E 537
            P    +  ++  L + G+ +  S +  +M ++G   +      +++     G ++   E
Sbjct: 563 LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYE 622

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            L  + +     +V  + S++  L++  +   A  L +    +   +++  Y  ++D   
Sbjct: 623 VLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFG 682

Query: 598 AAGKTLNAYSILFKIMEKG---GVTDWKS 623
             G+   AY IL ++M+KG    V  W S
Sbjct: 683 KVGRIDEAYLILEEMMKKGLTPNVYTWNS 711



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/539 (22%), Positives = 231/539 (42%), Gaps = 15/539 (2%)

Query: 3   ERAWTTRLQNKIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A+    Q K R  +P     N +   L   +  + AL  F  +++    N    T+  
Sbjct: 339 ENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSS--TYNI 396

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I++L   GK+  A  I  +M   G+  +     ++++   K    + + ++F+   Q G
Sbjct: 397 IIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRG 456

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +  +Y +L   + ++G    A R F  ML  G       Y  ++  FF+  + E   
Sbjct: 457 CNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGH 516

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F++M  RG   D+   NT ++   +   +++   +F ++K     P V SY+ +I G 
Sbjct: 517 KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGL 576

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               +A +   IF  MK      +A  Y A++ G C +GK+ +  +VL EM  + +PP  
Sbjct: 577 TKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPT- 635

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + +  ++    K   L+ A  + +      I      Y  LI+ F K    D A  +L+
Sbjct: 636 VATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILE 695

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
           ++++K         L     ++N ++  L    +  +A I F Q MK+    P    ++ 
Sbjct: 696 EMMKK--------GLTPNVYTWNSLMDALVKAEEINEALICF-QSMKEMKCSPNTYTYSI 746

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  +    + AF   + M ++G+  +   Y  +I    + G   DA +  +    +G
Sbjct: 747 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANG 806

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            +P ++ F +++E +    R   A  V +    KG + N+     +L+AL     +E+A
Sbjct: 807 GTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 217/514 (42%), Gaps = 72/514 (14%)

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
            YN +L   FLS  L    +  E+M   G  +       +++   R +++D+AE++ A M
Sbjct: 116 AYNAVLP--FLSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAM 173

Query: 223 KEKNIEPTVISYTTMIK---------------------GY-VAVE-------------RA 247
           +     P   +YT +I                      GY V V              R 
Sbjct: 174 RRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRV 233

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           + AL + DE+K   ++P+ V Y   +     AG +    K   E+  + + P D S +  
Sbjct: 234 EGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVS-YTS 292

Query: 308 LLGVQCKSGHLNAAADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
           ++ V CK+G L+ A ++   M    ++P  A  Y  +I  +  A  ++ A KLLD+L E+
Sbjct: 293 MIWVLCKAGRLSEAEELFGQMETERAVPC-AYAYNTMIMGYGSAGQFENAYKLLDQLKER 351

Query: 367 EIILRPQS------------------TL------DME--ASSYNPMIQHLCHNGQTGKAE 400
             I    S                  TL      D E  +S+YN +I  LC  G+  +A 
Sbjct: 352 GCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAY 411

Query: 401 IFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           +  R  M+   L P  +  N ++    K    + A+E+ +   +RG   ++  Y  LI+ 
Sbjct: 412 M-IRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDG 470

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             +KG   DA    ++M++ GH+    ++ S++ + F  GR +   ++ K M  +G + +
Sbjct: 471 LGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLD 575
           L L+   ++ +   G VE+     + +   G +P+  S   L+  L++ G+      +  
Sbjct: 531 LTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFH 590

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
               +   +D  +Y  V+D    +GK   AY +L
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVL 624



 Score = 39.3 bits (90), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
           P  ADAY  ++       + A  +  L+ M   G+   +     ++ +L    R+  A R
Sbjct: 111 PLPADAYNAVLP--FLSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAER 168

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLS 562
           V+ +M     +        ++ A+      E AL  +  M + G    VP F +L+  L+
Sbjct: 169 VIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALA 228

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
            +G+   A+ L+D   G     D+  Y   +D    AG    A+    ++  +G   D  
Sbjct: 229 REGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDV 288

Query: 623 SSDKLIAGLNQEGNTKQADIL 643
           S   +I  L + G   +A+ L
Sbjct: 289 SYTSMIWVLCKAGRLSEAEEL 309


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 204/417 (48%), Gaps = 10/417 (2%)

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           ++++ +K  Q D   +  LI  + K   + ++ ++ D M+         +Y+ +   +  
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           RG+  +A +  N++LS+  +PT  TY +++    L   ++ A++  ++M SRG+  D+ T
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YNT+I G  +   +D A ++   ++ K  EP VISY  +++  +   + ++  ++  +M 
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           S    PN VTY+ L+  LC  GK+ E   +L+ M E+ + P D   +  L+   C+ G L
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP-DAYSYDPLIAAFCREGRL 384

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A + L+ MI      +  +Y  ++   CK    D+A+++  KL   E+   P S    
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL--GEVGCSPNS---- 438

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
             SSYN M   L  +G   +A     ++M  G+  D + +N++I    +EG  D AFE++
Sbjct: 439 --SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
             M           Y  ++  + +     DA   L+SM+ +G  P  + +  ++E +
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/486 (24%), Positives = 217/486 (44%), Gaps = 12/486 (2%)

Query: 56  RETH-LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           R+T  LK+     R G    +  +L  M +KG   D  +   LI+ +     + ++V++ 
Sbjct: 88  RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM 147

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           +I+++ G +  V +Y+AL     +  R   A R  ++M S+   P   TYN+M+      
Sbjct: 148 EILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL+ A++    + S      V+TY  +I        +DEA KL  EM  + ++P + +Y
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I+G       D A  +   ++    +P+ ++Y  LL  L + GK  E +K++ +M  
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P +   +  L+   C+ G +  A ++LK M    +  +A  Y  LI  FC+    D
Sbjct: 327 EKCDP-NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            AI+ L+ ++    +         +  +YN ++  LC NG+  +A   F +L + G   +
Sbjct: 386 VAIEFLETMISDGCL--------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
             ++N +       G+   A  ++  M   G+  D   Y  +I    R+G   +A   L 
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M      P+   +  V+    +  R++ A  V++SMV  G + N      ++E +   G
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557

Query: 534 HVEEAL 539
           +  EA+
Sbjct: 558 YRAEAM 563



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 192/430 (44%), Gaps = 47/430 (10%)

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           E+  L   M  K   P VI  T +IKG+  +     A+R+ + ++ F  +P+   Y AL+
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C   ++ +  +VL  M  +   P D   +  ++G  C  G L+ A  VL  ++  + 
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSP-DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y ILIE        D A+KL+D+++ +   L+P                     
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRG--LKP--------------------- 261

Query: 394 GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
                              D   +N +IRG  KEG  D AFE+V+ +  +G   D  +Y 
Sbjct: 262 -------------------DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            L+ + L +G+  + +  +  M  +   P    +  ++ +L  DG+++ A  ++K M EK
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAA 570
           G+  +      ++ A    G ++ A+  ++ M+  G +P   N++++L+ L + GK   A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           +++        C  + +SY  +  AL ++G  + A  ++ ++M  G   D  + + +I+ 
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482

Query: 631 LNQEGNTKQA 640
           L +EG   +A
Sbjct: 483 LCREGMVDEA 492



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 193/419 (46%), Gaps = 15/419 (3%)

Query: 8   TRLQNKIRALVPQFDHNLV-YNVLHGAKNSEHALQFFRWVERAGLFNHDRET---HLKMI 63
           TR+ +++R+    F  + V YN++ G+  S   L     V    L ++ + T   +  +I
Sbjct: 178 TRVLDRMRS--KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235

Query: 64  EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
           E     G ++ A  ++ +M  +G++ D   +  +I    K+G+V  + ++   ++  G E
Sbjct: 236 EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE 295

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
             V SY+ L + +L +G++   ++   KM SE  +P   TY++++       K+E A+  
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
            + MK +G++ D  +Y+ +I  + R  ++D A +    M      P +++Y T++     
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             +AD AL IF ++      PN+ +Y  +   L  +G  +    ++ EM+   I P D  
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP-DEI 474

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  ++   C+ G ++ A ++L  M           Y I++  FCKA   + AI +L+ +
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIR 422
           V      RP  T      +Y  +I+ +   G   +A      L++   +   +F  L R
Sbjct: 535 VGNGC--RPNET------TYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHR 585


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 143/569 (25%), Positives = 262/569 (46%), Gaps = 32/569 (5%)

Query: 56  RETHLK--MIEILGRVGKLNHARCILLDM--PKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           R TH++  +I++L R G+++ A  +L +M  PK     + +   ++  +  K+  V  +V
Sbjct: 190 RLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAV 249

Query: 112 ---KIFDIMKQLGVERSVKSYDALFKLI---LRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
              +I  ++ +        +   L +LI    R GR   A    + ++  G      + N
Sbjct: 250 DEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCN 309

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK-- 223
            +L     + + +       +MK   I  +VVT+  +IN   +F+++DEA ++F +M   
Sbjct: 310 ALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGG 369

Query: 224 EKN---IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAVTYTALLPGLCDA 279
           E N   +EP VI+Y T+I G   V R ++ L + + M+S     PN VTY  L+ G C A
Sbjct: 370 ESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKA 429

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
             +   +++  +M +  +PP  N V +  L+   CK G +N A +    M    +   A 
Sbjct: 430 SMIEAARELFDQMNKDGVPP--NVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAV 487

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI  FC     ++A++L D+++E        +    +A  Y  +I  L   G+  +
Sbjct: 488 TYTALIRAFCNVNNIEKAMELFDEMLE--------AGCSPDAIVYYTLISGLSQAGKLDR 539

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A     ++ + G   D V+FN LI G  ++   D A+E++K M   G+  D   Y  LI 
Sbjct: 540 ASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLIS 599

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG-VK 516
            + + G+ + A   +  M+++G  P    + +++ +   +G +  A ++ + M     V 
Sbjct: 600 HFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVP 659

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            N  +   ++ +L  +  V+ AL  +D M   G  PN   F+++   L EK     A +L
Sbjct: 660 PNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFEL 719

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           +D      C  D  + E + + L A G+T
Sbjct: 720 MDRMTEHACNPDYITMEILTEWLSAVGET 748



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 140/676 (20%), Positives = 275/676 (40%), Gaps = 72/676 (10%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           HNL+  +     ++  AL+FF WV+              +  +     +  ++   LLD+
Sbjct: 88  HNLL-QITRLLGSTAKALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNSHNKLLDL 146

Query: 83  PKKG----VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY-DALFKLIL 137
            K      +    +   +LI  +G+  +V ES   F +  +L   R +    + L  ++ 
Sbjct: 147 FKTSKSHKIPLSVNAATLLIRCFGRAQMVDES---FLVYNELCPSRRLTHIRNILIDVLF 203

Query: 138 RRGRYMMAKRYFNKMLSEGIE--PTRHTYNVMLWGFFLSLKLETAI----------RFFE 185
           R+GR   A    ++ML    E  P  +T +++        K+  A+          +F E
Sbjct: 204 RKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAE 263

Query: 186 D--------------------------------MKSRGISLDVVTYNTMINGYNRFKKMD 213
                                            MK  G+ ++  + N ++    R ++  
Sbjct: 264 HEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGV-MEAASCNALLTALGRAREFK 322

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS-----FDVKPNAVT 268
               L AEMKE +I+P V+++  +I       R D+AL +F++M       F V+P+ +T
Sbjct: 323 RMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVIT 382

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ GLC  G+  E   ++  M  +     +   +  L+   CK+  + AA ++   M
Sbjct: 383 YNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQM 442

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
            +  +P        L++  CK    + A++  +++  K         L   A +Y  +I+
Sbjct: 443 NKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGK--------GLKGNAVTYTALIR 494

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
             C+     KA   F ++++ G   D + +  LI G S+ G  D A  ++  M   G   
Sbjct: 495 AFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSP 554

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D  ++  LI  + RK +  +A   L  M   G  P    + +++    + G   TA R+M
Sbjct: 555 DIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLM 614

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN----FDSLLSVLSE 563
           K MV++G+   +     ++ A  + G+++EA+     M  +  VP     ++ L++ L  
Sbjct: 615 KKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCR 674

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
           K +   A+ L+D    +    +  ++  +   L        A+ ++ ++ E     D+ +
Sbjct: 675 KNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYIT 734

Query: 624 SDKLIAGLNQEGNTKQ 639
            + L   L+  G T +
Sbjct: 735 MEILTEWLSAVGETAK 750



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 217/489 (44%), Gaps = 38/489 (7%)

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            F+  KS  I L V     +I  + R + +DE+  ++ E+        +     +I    
Sbjct: 146 LFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHI--RNILIDVLF 203

Query: 243 AVERADDALRIFDEM--KSFDVKPNAVTYTALLPGLCD---AGKMV---EVQKVLREMVE 294
              R DDAL + DEM     +  PN+ T   +   L      G+ V   E+  ++ +  E
Sbjct: 204 RKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAE 263

Query: 295 RYIPPKDNSVFM-KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
             + P  NS+++ +L+   C+SG  + A DVL  +++L    EA     L+    +A  +
Sbjct: 264 HEVFP--NSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREF 321

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM---KKG 410
            R   LL ++  KE+ ++P         ++  +I HLC   +  +A   F ++      G
Sbjct: 322 KRMNTLLAEM--KEMDIQPN------VVTFGILINHLCKFRRVDEALEVFEKMNGGESNG 373

Query: 411 VL---DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR---DADAYICLIESYLRKGE 464
            L   D + +N LI G  K G  +    +V+ M  R  PR   +   Y CLI+ Y +   
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLGLVERM--RSQPRCMPNTVTYNCLIDGYCKASM 431

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              A+   D M +DG  P      ++++ + + GR+  A      M  KG+K N      
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           ++ A     ++E+A+   D M+++G  P+   + +L+S LS+ GK   A  +L       
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQA 640
              D+ S+  +++      K   AY +L K ME  G+  D  + + LI+  ++ G+   A
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEML-KEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610

Query: 641 D-ILSRMIR 648
             ++ +M++
Sbjct: 611 HRLMKKMVK 619



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 2/258 (0%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
            N E A++ F  +  AG  + D   +  +I  L + GKL+ A  +L  M + G   D   
Sbjct: 500 NNIEKAMELFDEMLEAGC-SPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVS 558

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F VLI  + +K  + E+ ++   M+  G++    +Y+ L     + G +  A R   KM+
Sbjct: 559 FNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMV 618

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG-ISLDVVTYNTMINGYNRFKKM 212
            EG+ PT  TY  ++  + L+  L+ A++ F DM S   +  + V YN +IN   R  ++
Sbjct: 619 KEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQV 678

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D A  L  +MK K ++P   ++  M KG         A  + D M      P+ +T   L
Sbjct: 679 DLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738

Query: 273 LPGLCDAGKMVEVQKVLR 290
              L   G+  +++  ++
Sbjct: 739 TEWLSAVGETAKLKSFVQ 756


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 226/512 (44%), Gaps = 52/512 (10%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAK---NSEHALQFFRWVERAGLFNHDRETHLKMIEIL 66
           L +  R    +   N V  VL   +     E A++FF W  +   + H  E H+ +IE+L
Sbjct: 99  LDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELL 158

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
                L   R +  ++  +G+   E     LI+S+G  G+V+E + ++  MK+ G     
Sbjct: 159 TFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENG----- 213

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
                                         I+P+ +TYN ++ G   S+ +E+A + FE 
Sbjct: 214 ------------------------------IDPSLYTYNFLVNGLVNSMFIESAEKVFEV 243

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M    I  D VTYN MI GY +  K+ +A + F +M+ KN++P  I+Y T+I+   +   
Sbjct: 244 MDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERD 303

Query: 247 ADDALRIFDEM--KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            D  L ++ EM  +  ++ P+  +Y+ ++ GLC   K +E   V   M ++     + ++
Sbjct: 304 FDTCLSLYLEMEERGLEIPPH--SYSLVIGGLCKQRKCMEAYAVFETMNQKGC-RANVAI 360

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+    K+G +  A  + + M       +A  Y +L+   CK+   D  ++L D   
Sbjct: 361 YTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCR 420

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
            K + +         A  Y  +I  L   G+   AE  F ++ +KG   D   +N +I  
Sbjct: 421 NKGVAI--------NAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDA 472

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
            +K G  D A  +   M   G  +    +  LI+   ++ +  +A    D MI+ G +P 
Sbjct: 473 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 532

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            + FR++   L   G+V  A +++  +   G+
Sbjct: 533 VASFRALAIGLCLCGKVARACKILDDLAPMGI 564



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 209/479 (43%), Gaps = 18/479 (3%)

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
           FFE +K RG+ +     N++I  +     ++E   ++  MKE  I+P++ +Y  ++ G V
Sbjct: 171 FFE-LKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 229

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                + A ++F+ M    + P+ VTY  ++ G C AGK+ +  +  R+M  + + P D 
Sbjct: 230 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKP-DK 288

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +M L+         +    +   M    +      Y ++I   CK      A  + + 
Sbjct: 289 ITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFET 348

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLI 421
           + +K              + Y  +I     NG   +A   F ++  +G   D V ++ L+
Sbjct: 349 MNQK--------GCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLV 400

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G  K G  D   E+      +GV  +A  Y  LI+   + G   DA+   + M E G +
Sbjct: 401 NGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCA 460

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
             S  + +++++L + G++  A  +   M E+G  + +     +++ L      EEA+  
Sbjct: 461 RDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKF 520

Query: 542 IDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
            D M+  G  P   +F +L   L   GK   A K+LD  L    II   ++E +++ L  
Sbjct: 521 WDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDD-LAPMGIIPETAFEDMINTLCK 579

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
           A +   A  +   I+++G     +    LI  L + GN+   D++ +++  ++  G  +
Sbjct: 580 AQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNS---DLVIKLMHSKIGIGYDR 635



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 65/330 (19%), Positives = 127/330 (38%), Gaps = 76/330 (23%)

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG---------------- 428
           +I+ L  +    K  + F +L  +G+L    A N+LI+     G                
Sbjct: 154 LIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENG 213

Query: 429 -NP------------------DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA- 468
            +P                  +SA ++ ++M    +  D   Y  +I+ Y + G+   A 
Sbjct: 214 IDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAM 273

Query: 469 --------------KTALDSMIEDGHS---------------------PASSLFRSVMES 493
                         K    ++I+  +S                     P  S +  V+  
Sbjct: 274 EKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHS-YSLVIGG 332

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L +  +   A  V ++M +KG + N+ +   ++++    G +EEA+   + M   G  P+
Sbjct: 333 LCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPD 392

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              +  L++ L + G+    ++L DFC  +   I+   Y  ++D L  AG+  +A ++  
Sbjct: 393 AVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFE 452

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++ EKG   D    + +I  L + G   QA
Sbjct: 453 EMSEKGCARDSYCYNAIIDALAKHGKIDQA 482


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 149/614 (24%), Positives = 271/614 (44%), Gaps = 78/614 (12%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+FFRW ER   F     T+  +++IL R G +  A C++           E +  V +
Sbjct: 64  ALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVM-----------EKVVSVKM 112

Query: 99  ES--------------YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM- 143
           E+              Y KK ++++ + +F  M   G+   +K+ + + +L+  R   + 
Sbjct: 113 ENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSID 172

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           +A+  +N M+  GI PT  TYN ML  F    K++ A++    M+  G   + VTYN ++
Sbjct: 173 VAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLV 232

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG +   ++++A++L  EM    +E +  +Y  +I+GY    + D+A R+ +EM S    
Sbjct: 233 NGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAV 292

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P  VTY  ++ GLC  G++ + +K+L  MV + + P D   +  L+    + G++  A  
Sbjct: 293 PTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMP-DLVSYNTLIYGYTRLGNIGEAF- 350

Query: 324 VLKAMIRLS--IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
           +L A +R    +P+    Y  LI+  C+    D A++L D+++        +   D +  
Sbjct: 351 LLFAELRFRGLVPSVVT-YNTLIDGLCRMGDLDVAMRLKDEMI--------KHGPDPDVF 401

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-----------------DP---------- 414
           ++  +++  C  G    A+  F +++ +G+                  DP          
Sbjct: 402 TFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEM 461

Query: 415 ---------VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
                    + +N  I G  K GN   A E+VK M   G+  D   Y  +I ++L  G  
Sbjct: 462 LARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHL 521

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A+     M+  G  P+   +  ++ S    GR++ A      M EKGV  N+     +
Sbjct: 522 RKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL 581

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEK---GKTIAAVKLLDFCLGRDC 582
           +  L     +++A      M   G  PN  +   +++E    G    A++L    L R+ 
Sbjct: 582 INGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREI 641

Query: 583 IIDLASYEKVLDAL 596
             D  ++  +L  L
Sbjct: 642 QPDSCTHSALLKHL 655



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 2/262 (0%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           ++G L  A+ +  +M  +G+Q D   +   I    K G   ++  + + M   G    + 
Sbjct: 412 KLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 471

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+     + + G    A     KML  G+ P   TY  ++    ++  L  A   F +M
Sbjct: 472 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEM 531

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            S+GI   VVTY  +I+ Y    ++  A   F EM EK + P VI+Y  +I G   V + 
Sbjct: 532 LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 591

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD--NSVF 305
           D A + F EM++  + PN  TYT L+   C+ G   E  ++ ++M++R I P    +S  
Sbjct: 592 DQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSAL 651

Query: 306 MKLLGVQCKSGHLNAAADVLKA 327
           +K L    KS  +    +V+ A
Sbjct: 652 LKHLNKDYKSHVVRHLENVIAA 673



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/364 (21%), Positives = 165/364 (45%), Gaps = 16/364 (4%)

Query: 288 VLREMVERYIPP--KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           V  +MV + + P  K+ +  ++LL  + +   ++ A +V   M+   I      Y  +++
Sbjct: 141 VFYKMVSKGMLPDLKNCNRVLRLL--RDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLD 198

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
           +FCK      A++LL ++  +++   P         +YN ++  L H+G+  +A+   ++
Sbjct: 199 SFCKQGKVQEALQLLLQM--QKMGCLPNDV------TYNVLVNGLSHSGELEQAKELIQE 250

Query: 406 LMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +++ G+ +    ++ LIRG+ ++G  D A  + + M  RG       Y  ++    + G 
Sbjct: 251 MLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGR 310

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
            +DA+  LD M+     P    + +++      G +  A  +   +  +G+  ++     
Sbjct: 311 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNT 370

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           +++ L   G ++ A+   D M++ G  P+   F  L+    + G    A +L D  L R 
Sbjct: 371 LIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRG 430

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
              D  +Y   +   L  G    A+ +  +++ +G   D  + +  I GL++ GN K+A 
Sbjct: 431 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 490

Query: 642 ILSR 645
            L +
Sbjct: 491 ELVK 494



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 118/248 (47%), Gaps = 5/248 (2%)

Query: 398 KAEIFFRQLMKKGVL-DPVAFNNLIRG-HSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
           K  + F +++ KG+L D    N ++R    ++ + D A E+  +M   G+      Y  +
Sbjct: 137 KCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTM 196

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           ++S+ ++G+  +A   L  M + G  P    +  ++  L   G ++ A  +++ M+  G+
Sbjct: 197 LDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGL 256

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
           + +      ++     +G ++EA    + M+  G+VP    +++++  L + G+   A K
Sbjct: 257 EVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARK 316

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           LLD  + ++ + DL SY  ++      G    A+ +  ++  +G V    + + LI GL 
Sbjct: 317 LLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLC 376

Query: 633 QEGNTKQA 640
           + G+   A
Sbjct: 377 RMGDLDVA 384


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 226/489 (46%), Gaps = 16/489 (3%)

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
           G VGK   A  +  ++   GV      + VLI+    +G+  E+ K+   M + G+  S 
Sbjct: 305 GEVGK---ALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLST 361

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
             ++ + K +LR  R+  A      ++  G+ P   TY  ++       KL  A+  ++ 
Sbjct: 362 YEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDK 420

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           MK  G+   +VTY++++ GY    +MDEA KL++EM +K   P  ++YTT++KGY+  + 
Sbjct: 421 MKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKA 480

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL-REMVERYIPPKDNSVF 305
            D+A  + +EM+   V     TY  L+ GL    ++ EV ++L R + E ++P      +
Sbjct: 481 FDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVP--TTMTY 538

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             ++    K+G + +A  + + M +  I      Y   I+ +C+    D A+KLL     
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL----- 593

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
             I +R +  +  + ++YN  I   C  G   +A  F   L+K G+  D   +N+ + G+
Sbjct: 594 --IYVR-RDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY 650

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
                   A +    M ++ V  D + Y  LI+ + + G  A A      M+ +   P  
Sbjct: 651 KNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDD 710

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             F ++   L   G +  A R++  M    V  N+     ++ A +  G ++EA    D 
Sbjct: 711 KTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDE 770

Query: 545 MMQSGSVPN 553
           M+ SG VP+
Sbjct: 771 MLSSGVVPD 779



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 139/640 (21%), Positives = 270/640 (42%), Gaps = 69/640 (10%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D ++   ++    R      A  +  +M  KG   D  M++V+I +  + G+  ++V++F
Sbjct: 149 DAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLF 208

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN--------- 165
           D M   GV+   + Y      + +      A +   KM   G EP   TY+         
Sbjct: 209 DEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKV 268

Query: 166 ---------------------------VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
                                      +++ G+ L  ++  A+  F+++ S G++   VT
Sbjct: 269 GRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVT 328

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y  +I G +     DE  KL  +M E+ +  +   +  +IKG +  +R  DA+ + + + 
Sbjct: 329 YGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVV 388

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
              V P+  TY  L+  LC   K+ E   +  +M E  + P   +    LLG  C+ G +
Sbjct: 389 DTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLG-YCEKGRM 446

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK------------ 366
           + A  +   M     P     Y  L++ + K + +D A  LL+++ +             
Sbjct: 447 DEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNIL 506

Query: 367 --------------EIILRPQSTLDMEAS-SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
                         E++ R  S   +  + +YN +I      G  G A   +RQ+ KKG+
Sbjct: 507 INGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566

Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             + V + + I G+ +    D A +++  + R G+  D  AY   I+++ ++G  + A  
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L  +++DG +P  +++ S +        +  AS+   SM+++ V  + ++   +++   
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G+V  AL     MM +  +P+   F +L   L   G    A +LLD     D   ++ 
Sbjct: 687 KVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV 746

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
           +Y  +++A +  GK   A+ +  +++  G V D  + D L
Sbjct: 747 TYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 123/567 (21%), Positives = 244/567 (43%), Gaps = 21/567 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  +GV  D      L+ +  +     +++ +FD M+  G     K YD + +  +R G 
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A R F++M   G++P    Y + + G       + A++    M+  G     +TY++
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260

Query: 202 MINGYNRFKKMDEAEKLFAEM---KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           +++   +  +MDEA +L  +M     K ++  V+  T ++ GY        AL +FDE+ 
Sbjct: 261 VVDVLVKVGRMDEALRLKDQMLLATGKKMD--VVLATMLMHGYCLHGEVGKALDLFDEVV 318

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           S  V P  VTY  L+ G CDA  M  E  K+ R+M+E+ +        + + G+  +   
Sbjct: 319 SDGVTPTNVTYGVLIKG-CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGL-LRDKR 376

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
              A  +L+ ++   +P +   YG LI   CK +    A+ L DK+  KE  ++P     
Sbjct: 377 WKDAIGLLELVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKM--KEAGVKPSIV-- 431

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
               +Y+ ++   C  G+  +A   + ++  KG   + V +  L++G+ K+   D+A+ +
Sbjct: 432 ----TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYAL 487

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +  M + GV      Y  LI          +    L   + +G  P +  + S++    +
Sbjct: 488 LNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVK 547

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G + +A  + + M +KG+  N+      ++        + A+  +  + + G  P+   
Sbjct: 548 AGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAA 607

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +++ +    ++G    A+  L   L      D+  Y   +           A    + ++
Sbjct: 608 YNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMI 667

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++  V D +    LI G ++ GN   A
Sbjct: 668 KQRVVADTEIYTTLIDGFSKVGNVAFA 694



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 112/514 (21%), Positives = 219/514 (42%), Gaps = 34/514 (6%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           +++M++ G+ P   +   +L           A+  F++M+ +G   D   Y+ +I    R
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
                +A +LF EM    ++P    Y   I G   +  AD AL++  +M+    +P  +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y++++  L   G+M E  ++  +M+       D  +   L+   C  G +  A D+   +
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 329 IRLSIPTEAGHYGILIENFCKAE-MYDRAIKLLDKLVEKEIIL----------------R 371
           +   +      YG+LI+  C AE M D   KL  +++E+ ++L                R
Sbjct: 318 VSDGVTPTNVTYGVLIKG-CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKR 376

Query: 372 PQSTLDM----------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNL 420
            +  + +          +  +Y  +I  LC + +  +A   + ++ + GV    V +++L
Sbjct: 377 WKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G+ ++G  D A ++   M  +G P +   Y  L++ Y++K    +A   L+ M ++G 
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           S     +  ++  L+   RV     ++K  + +G          I+   +  G +  A G
Sbjct: 497 SCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFG 556

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIA---AVKLLDFCLGRDCI-IDLASYEKVLDAL 596
               M + G  PN  +  S +    +T     AVKLL + + RD I  D+A+Y   +D  
Sbjct: 557 MYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY-VRRDGIQPDIAAYNAFIDTF 615

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
              G    A   L  +++ G   D    +  + G
Sbjct: 616 CKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/438 (22%), Positives = 193/438 (44%), Gaps = 14/438 (3%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           L+  ++ NLV   L   K  + A+     V   G+   D  T+  +I  L +  KL+ A 
Sbjct: 358 LLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV--PDVFTYGCLIHWLCKHQKLHEAV 415

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            +   M + GV+     +  L+  Y +KG + E++K++  M   G   +  +Y  L K  
Sbjct: 416 NLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGY 475

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
           +++  +  A    N+M   G+    +TYN+++ G ++  ++       +   S G     
Sbjct: 476 IKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTT 535

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           +TYN++ING+ +   M  A  ++ +M++K I P +++YT+ I GY      D A+++   
Sbjct: 536 MTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           ++   ++P+   Y A +   C  G M      L  +++  + P D +V+   +       
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTP-DVTVYNSFVTGYKNLK 654

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            +  A+    +MI+  +  +   Y  LI+ F K      A++L  +++   +I       
Sbjct: 655 MMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVI------- 707

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAF 434
             +  ++  +   LC +G    A+      M++  + P  V +N LI    ++G    AF
Sbjct: 708 -PDDKTFTALTHGLCRSGDIDGAKRLLDD-MRRLDVSPNIVTYNMLINACVRDGKLQEAF 765

Query: 435 EIVKIMGRRGVPRDADAY 452
           ++   M   GV  D   Y
Sbjct: 766 QLHDEMLSSGVVPDDTTY 783



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 177/435 (40%), Gaps = 15/435 (3%)

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           ++ M  + + P   S T ++        A DAL +FDEM+      +A  Y  ++     
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G   +  ++  EM    + P D  V+   +   CK    + A  VL  M          
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKP-DERVYAITISGLCKLRDADRALQVLGKMREAGFEPWEL 256

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH-LCHNGQTG 397
            Y  +++   K    D A++L D     +++L     +D+  ++   M+ H  C +G+ G
Sbjct: 257 TYSSVVDVLVKVGRMDEALRLKD-----QMLLATGKKMDVVLAT---MLMHGYCLHGEVG 308

Query: 398 KAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           KA   F +++  GV    V +  LI+G   EG  D  +++ + M  +G+      +  +I
Sbjct: 309 KALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVI 368

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           +  LR     DA   L+ +++ G  P    +  ++  L +  ++  A  +   M E GVK
Sbjct: 369 KGLLRDKRWKDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVK 427

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            ++     +L     +G ++EAL     M   G  PN   + +L+    +K     A  L
Sbjct: 428 PSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYAL 487

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
           L+            +Y  +++ L    +      +L + + +G V    + + +I G  +
Sbjct: 488 LNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVK 547

Query: 634 EGNTKQADILSRMIR 648
            G    A  + R +R
Sbjct: 548 AGMMGSAFGMYRQMR 562


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 252/561 (44%), Gaps = 56/561 (9%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           M+  +I  + K G V ++ ++ D MK+ GV+  V  +  L + + R+GR   A   F  M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR-----GISLDVVTYNTMINGYN 207
             E   P   TYN ++ G   + +++  +  F+DM+ R     G   DV++Y+T+I+   
Sbjct: 61  -GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           + +++D+A + F  M+     P V++Y+++I G   V+R D+A  +  ++K  D+ P A+
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLK 326
            Y A++ G    GK  E  ++L  M E+      N + F  +L    K+     A    +
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGI--NIIDFNAMLHALWKNDEQEKACQFFE 237

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            +++         Y + +   CKA   D A ++L ++VE        S +  +  +Y+ +
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVE--------SKVTPDVITYSSI 289

Query: 387 IQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKE------------------ 427
           I   C  G+  KA ++F R ++ + +  PV F  L+ G S+                   
Sbjct: 290 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF 349

Query: 428 -----------------GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
                             + +SA EI   M R+    DA+ Y  LI+   R     +AK 
Sbjct: 350 IPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKE 409

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            LD M  D   P  ++  +++E L + G V  A  V+ ++VE       D   +++E ++
Sbjct: 410 FLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMV 469

Query: 531 MRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCL--GRDCIIDLAS 588
           ++G   +    + ++     +   DS ++   +      A  L+ + L  G  C  D+A 
Sbjct: 470 LKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMAD 529

Query: 589 YE-KVLDALLAAGKTLNAYSI 608
              ++ +A++AAG T  A ++
Sbjct: 530 DAFRIFEAMVAAGFTPQAQTM 550



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/477 (20%), Positives = 212/477 (44%), Gaps = 27/477 (5%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           ++ V + L  A+  + A ++F+ +   G    +  T+  +I+ L +V +++ A  +L+ +
Sbjct: 111 YSTVIDALCKAQRVDKAYEYFKRMRAVGC-APNVVTYSSLIDGLCKVDRVDEAYSLLMQL 169

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             + +      +  ++  + ++G   E +++   MK+ G   ++  ++A+   + +    
Sbjct: 170 KGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 229

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A ++F ++L  G +P   TYNV + G   + K++ A R   +M    ++ DV+TY+++
Sbjct: 230 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSI 289

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G+ +  +MD+A+ +F  M      P  +++ T++ G+   +++ +A R+ ++M +   
Sbjct: 290 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF 349

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P   TY  L+  +C A  +    ++  +M  +   P D + +  L+   C++  ++ A 
Sbjct: 350 IPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQP-DANTYAPLIQCLCRARRVDEAK 408

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           + L  M   ++         L+E  CK    D A  +LD +VE                 
Sbjct: 409 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------- 451

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
                  +C  G+  +A     Q++ KGV  D   +  ++R        DSA    + M 
Sbjct: 452 -------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMA 504

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            RG       Y  LI          DA    ++M+  G +P +   R++   L + G
Sbjct: 505 SRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/420 (21%), Positives = 181/420 (43%), Gaps = 27/420 (6%)

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           YTT+I G+    + D A  + DEMK   VK + + ++ L+ GLC  G++ E  +  + M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH--------YGILIE 345
           E   P  +   +  ++   CK+  ++   ++   M +     EA H        Y  +I+
Sbjct: 62  EECSP--NVITYNTVVNGLCKANRIDEGLELFDDMEK---RYEASHGCEPDVISYSTVID 116

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CKA+  D+A +   ++  + +   P         +Y+ +I  LC   +  +A     Q
Sbjct: 117 ALCKAQRVDKAYEYFKRM--RAVGCAPNVV------TYSSLIDGLCKVDRVDEAYSLLMQ 168

Query: 406 LMKKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           L  + ++ P A  +N ++ G  ++G P    E++  M  +G   +   +  ++ +  +  
Sbjct: 169 LKGEDMV-PRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 227

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           E   A    + +++ G  P    +   +  L + G+V  A R++  MVE  V  ++   +
Sbjct: 228 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYS 287

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            I++     G +++A      MM    +P+   F +LL   SE  K+  A ++ +  +  
Sbjct: 288 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 347

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             I  L +Y  ++D +  A    +A  I  K+  K    D  +   LI  L +     +A
Sbjct: 348 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEA 407



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/325 (22%), Positives = 141/325 (43%), Gaps = 27/325 (8%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  +I  FCKA   D+A +LLD++ E+ +         M+   ++ +IQ LC  G+  +A
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGV--------KMDVLLHSTLIQGLCRKGRIDEA 53

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR-----GVPRDADAYIC 454
              F+ + ++   + + +N ++ G  K    D   E+   M +R     G   D  +Y  
Sbjct: 54  LEQFKSMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYST 113

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM-----KS 509
           +I++  +      A      M   G +P    + S+++ L +  RV  A  ++     + 
Sbjct: 114 VIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGED 173

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGK 566
           MV + +  N      ++     +G   E L  +  M + G   ++ +F+++L  L +  +
Sbjct: 174 MVPRAMYYN-----AVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE 228

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A +  +  L      ++ +Y   +  L  AGK   AY IL +++E     D  +   
Sbjct: 229 QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSS 288

Query: 627 LIAGLNQEGNTKQA-DILSRMIRGE 650
           +I G  + G   +A D+ +RM+  E
Sbjct: 289 IIDGFCKAGRMDKADDVFTRMMVHE 313



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 84/172 (48%), Gaps = 7/172 (4%)

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
           ++ +V+    + G+V  A  ++  M E+GVK ++ L + +++ L  +G ++EAL +   M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 546 MQ--SGSVPNFDSLLSVLSEKGKTIAAVKLLD-----FCLGRDCIIDLASYEKVLDALLA 598
            +  S +V  ++++++ L +  +    ++L D     +     C  D+ SY  V+DAL  
Sbjct: 61  GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           A +   AY    ++   G   +  +   LI GL +     +A  L   ++GE
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGE 172


>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 177/362 (48%), Gaps = 11/362 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI  LGR+GK+  A+ +      +G       F  LI +YGK G   E++K+F+ MK  G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252

Query: 122 VERSVKSYDALFKLILRRG-RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           ++ ++ +Y+A+     + G  +      F +ML  G++P R TYN +L         E A
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
              F +M  RGI  DV TYNT+++   +  +MD A ++  EM  K I P V++Y+TM  G
Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADG 372

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y    R +DAL +++EMK   +  + V+Y  LL      G+  +  KV +EM    +  K
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGV-KK 431

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  LL    K G  N    V K M +  +      Y  LI+ + K  +Y+ A+++ 
Sbjct: 432 DVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVF 491

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
            +          Q+ L  +   Y+ +I  LC NG    A +   ++ K+G+  + V +N+
Sbjct: 492 REF--------KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNS 543

Query: 420 LI 421
           +I
Sbjct: 544 II 545



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 179/378 (47%), Gaps = 11/378 (2%)

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + MI+   R  K++ A+ +F     +    TV +++ +I  Y      D+A+++F+ MK 
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250

Query: 260 FDVKPNAVTYTALLPGLCDAG-KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
             +KPN VTY A++      G +   V ++  EM+   + P D   +  LL V  + G  
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQP-DRITYNSLLAVCSRGGLW 309

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            AA ++   MI   I  +   Y  L++  CK    D A +++ ++  K+I+  P      
Sbjct: 310 EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKIL--PNVV--- 364

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
              +Y+ M       G+   A   + ++   G+ LD V++N L+  ++K G  + A ++ 
Sbjct: 365 ---TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC 421

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           K MG  GV +D   Y  L++ Y ++G+  +       M +D   P    + ++++   + 
Sbjct: 422 KEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKG 481

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
              + A  V +   + G+K ++ L ++++ AL   G V+ A+  +D M + G  PN  + 
Sbjct: 482 SLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTY 541

Query: 558 LSVLSEKGKTIAAVKLLD 575
            S++   G++  A  L+D
Sbjct: 542 NSIIDAFGRSTTAEFLVD 559



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 9/292 (3%)

Query: 13  KIRALVPQFDHNLVYNVL-----HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILG 67
           K+  L P     + YN +      G    +  ++ F  + R G+   DR T+  ++ +  
Sbjct: 249 KVSGLKPNL---VTYNAVIDACGKGGVEFKRVVEIFEEMLRNGV-QPDRITYNSLLAVCS 304

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R G    AR +  +M  +G+  D   +  L+++  K G +  + +I   M    +  +V 
Sbjct: 305 RGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVV 364

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y  +     + GR   A   +N+M   GI   R +YN +L  +    + E A++  ++M
Sbjct: 365 TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM 424

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            S G+  DVVTYN +++GY +  K +E  ++F EMK+  + P +++Y+T+I  Y      
Sbjct: 425 GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLY 484

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           ++A+ +F E K   +K + V Y+ L+  LC  G +     +L EM +  I P
Sbjct: 485 EEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRP 536



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 124/237 (52%), Gaps = 8/237 (3%)

Query: 45  WVERAGLFN--------HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           W     LFN         D  T+  +++ + + G+++ A  I+L+MP K +  +   +  
Sbjct: 309 WEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYST 368

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           + + Y K G +++++ +++ MK LG+     SY+ L  +  + GR+  A +   +M S G
Sbjct: 369 MADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           ++    TYN +L G+    K     R F++MK   +  +++TY+T+I+ Y++    +EA 
Sbjct: 429 VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAM 488

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           ++F E K+  ++  V+ Y+ +I         D A+ + DEM    ++PN VTY +++
Sbjct: 489 EVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSII 545



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 91/184 (49%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  M +   + G+L  A  +  +M   G+  D   +  L+  Y K G  ++++K+   M
Sbjct: 365 TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM 424

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              GV++ V +Y+AL     ++G++    R F +M  + + P   TY+ ++  +      
Sbjct: 425 GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLY 484

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A+  F + K  G+  DVV Y+ +IN   +   +D A  L  EM ++ I P V++Y ++
Sbjct: 485 EEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSI 544

Query: 238 IKGY 241
           I  +
Sbjct: 545 IDAF 548



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 131/297 (44%), Gaps = 34/297 (11%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL  +  ++  G+   DR ++  ++ I  ++G+   A  +  +M   GV+ D   +  
Sbjct: 380 EDALNLYNEMKFLGI-GLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNA 438

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L++ YGK+G   E  ++F  MK+  V  ++ +Y  L  +  +   Y  A   F +    G
Sbjct: 439 LLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD-EA 215
           ++     Y+ ++     +  +++A+   ++M   GI  +VVTYN++I+ + R    +   
Sbjct: 499 LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLV 558

Query: 216 EKLFAEMKEKNIEPTVI-------------------SYTTMI--------KGYVAVERAD 248
           + + A  + ++  PT +                    Y  ++        K  +  E   
Sbjct: 559 DGVGASNERQSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIR 618

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             L +F +M   ++KPN VT++A+L   C   K +E   +L E +  +    DN V+
Sbjct: 619 SILSVFKKMHELEIKPNVVTFSAILNA-CSRCKSIEDASMLLEELRLF----DNQVY 670



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I +  R G+   AK   ++ + +G+      F +++ +  + G    A +V +SM   G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252

Query: 515 VKENLDLVAKILEALLMRGHVE--EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           +K NL     +++A   +G VE    +   + M+++G  P+   ++SLL+V S  G   A
Sbjct: 253 LKPNLVTYNAVIDAC-GKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEA 311

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           A  L +  + R    D+ +Y  +LDA+   G+   AY I+ ++  K
Sbjct: 312 ARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGK 357



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 54/274 (19%), Positives = 119/274 (43%), Gaps = 42/274 (15%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I++  +      A  +  +  + G++ D  ++  LI +  K G+V  +V + D M
Sbjct: 470 TYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEM 529

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK--------------MLSEGIEPTRHT 163
            + G+  +V +Y+++       GR   A+   +               ML EG++ +   
Sbjct: 530 TKEGIRPNVVTYNSIIDAF---GRSTTAEFLVDGVGASNERQSESPTFMLIEGVDESEIN 586

Query: 164 YN-VMLWGFFLSL----------------KLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
           ++   ++ F+  L                ++ + +  F+ M    I  +VVT++ ++N  
Sbjct: 587 WDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNAC 646

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY---VAVERADDALRIFDEMKSFDVK 263
           +R K +++A  L  E++  + +   +++  ++ G+   V ++    A  +FDE+K  D  
Sbjct: 647 SRCKSIEDASMLLEELRLFDNQVYGVAHG-LLMGFSENVWIQ----AQYLFDEVKQMDSS 701

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
             +  Y AL   L   G+    Q V+ E   R +
Sbjct: 702 TASAFYNALTDMLWHFGQKRGAQLVVLEGKRRKV 735


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 229/486 (47%), Gaps = 14/486 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F +L+ ++  KG + +++     M+  G+     +Y+ L     R+G    A+    +M 
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +GI PT+ TYN ++  F     ++ A +  E M + G   D+ TYN +  G  +  K+D
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVD 330

Query: 214 EAEKLFAEMKEKNIE-PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           EA +L  EM+      P V++Y T++        + DALR+ +EM+   VKP  VT+  +
Sbjct: 331 EAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  GK+ E    L ++ E  + P D   +  L+   CK+G++  A  ++  M+   
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAP-DVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +      ++ N CK + Y+ A +LL           PQ     +  SY  ++     
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHS--------PPQRGFVPDEVSYGTVMAAYFK 501

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                 A   + Q++++ ++  ++ +N LI+G  +      A + +     +G+  D   
Sbjct: 502 EYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETT 561

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  +I +Y ++G+  +A    + M+E+   P      ++M  L   G++  A ++ +S V
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           EKG K ++     +++++   G V+ AL   D M   G  P+   ++ +LS LSE G++ 
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681

Query: 569 AAVKLL 574
            A  +L
Sbjct: 682 EAHNML 687



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 139/576 (24%), Positives = 262/576 (45%), Gaps = 31/576 (5%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G L  A   L  M   G+  D   +  L+ ++ +KG++ E+  +   MK+ G+  +  +Y
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     R G    A +    M + G EP   TYNV+  G   + K++ A R  ++M+ 
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMER 341

Query: 190 RGISL-DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            G +L DVVTYNT+++   +++   +A +L  EM++K ++PT++++  ++K      + +
Sbjct: 342 LGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLE 401

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +AL   +++    + P+ +TY  L+   C AG + +   ++ EMV + +   D      +
Sbjct: 402 EALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL-KMDTFTLNTV 460

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           L   CK      A ++L +  +     +   YG ++  + K    + A++L D+++E+++
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKE 427
           I           S+YN +I+ LC   +  +A     + ++KG V D   +N +I  + KE
Sbjct: 521 I--------PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKE 572

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G+ ++AF     M       D      L+      G+   A    +S +E G       +
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++++S+ + G V TA      M  KG++ +      +L AL   G  EEA   +  +  
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692

Query: 548 SGSV----------PNFDSLLSVLSEKGKTIA--AVKLLDFCLGRDCIIDLASYEKVLDA 595
           SG +          P+      V   +GK  A  + K  D          L +Y + L+ 
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNA--------LETYMERLNG 744

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           L   G+   A ++L ++M+KG   D  +   L+ GL
Sbjct: 745 LCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGL 780



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 130/574 (22%), Positives = 248/574 (43%), Gaps = 60/574 (10%)

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY--FNKMLSEGIEPTRHTYNVMLWG 170
           +  + ++ GV  S+++ +A+   + R    +       F  ++   + P  +T+N+++  
Sbjct: 158 LHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
                 L  A+     M+  G+S D VTYNT++N + R   + EA  L A MK   I PT
Sbjct: 218 HCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPT 277

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE------ 284
             +Y T++  +  +     A ++ + M ++  +P+  TY  L  GLC AGK+ E      
Sbjct: 278 QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKD 337

Query: 285 ------------------------------VQKVLREMVERYIPPK--DNSVFMKLLGVQ 312
                                           ++L EM ++ + P    +++ +K L   
Sbjct: 338 EMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSL--- 394

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           CK G L  A   L+ +    +  +   Y  LI+ +CKA    +A  L+D++V K      
Sbjct: 395 CKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK------ 448

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPD 431
              L M+  + N ++ +LC   +   AE       ++G V D V++  ++  + KE NP+
Sbjct: 449 --GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPE 506

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A  +   M  R +      Y  LI+   R     +A   L+  +E G  P  + +  ++
Sbjct: 507 PALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIII 566

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-- 549
            +  ++G ++ A R    MVE   K ++     ++  L + G +++AL   +  ++ G  
Sbjct: 567 HAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKK 626

Query: 550 -SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
             V  +++L+  + + G    A+   D    +    D  +Y  VL AL  AG++  A+++
Sbjct: 627 VDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNM 686

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADI 642
           L K+ + G     K S      L +  +  +AD+
Sbjct: 687 LHKLADSG-----KLSQSFACPLLKPSSADEADV 715



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 35/319 (10%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L ++ +   A  +L   P++G   DE  +  ++ +Y K+   + +++++D M +  +  S
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           + +Y+ L K + R  R   A    N+ + +G+ P   TYN+++  +     LE A RF  
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M       DVVT NT++NG     K+D+A KLF    EK  +  VI+Y T+I+    V 
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV------ERYIPP 299
             D AL  FD+M+   ++P+A TY  +L  L +AG+  E   +L ++       + +  P
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACP 703

Query: 300 ---------------------------KDNSV--FMKLLGVQCKSGHLNAAADVLKAMIR 330
                                      +DN++  +M+ L   C  G L  A  VL  M++
Sbjct: 704 LLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQ 763

Query: 331 LSIPTEAGHYGILIENFCK 349
             +P +   Y  L+E   K
Sbjct: 764 KGMPVDCSTYITLMEGLIK 782



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 196/466 (42%), Gaps = 28/466 (6%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           RL++++  L       + YN L  A    + S  AL+    +   G+      TH  +++
Sbjct: 334 RLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV-KPTLVTHNIVVK 392

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
            L + GKL  A   L  + ++G+  D   +  LI++Y K G V ++  + D M   G++ 
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
              + + +   + +  RY  A+   +     G  P   +Y  ++  +F     E A+R +
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           + M  R +   + TYNT+I G  R +++ EA     E  EK + P   +Y  +I  Y   
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKE 572

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
              ++A R  ++M     KP+ VT   L+ GLC  GK+ +  K+    VE+     D   
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG-KKVDVIT 631

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+   CK G ++ A      M    +  +A  Y +++    +A   + A  +L KL 
Sbjct: 632 YNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLA 691

Query: 365 EKE--------IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA 416
           +           +L+P S  + +   +             GK E    +  +   L+   
Sbjct: 692 DSGKLSQSFACPLLKPSSADEADVKEHE------------GKPEAESSEKAQDNALE--T 737

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           +   + G    G    A  ++  M ++G+P D   YI L+E  +++
Sbjct: 738 YMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKR 783



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/496 (22%), Positives = 214/496 (43%), Gaps = 30/496 (6%)

Query: 21  FDHNL-VYNVLH----GAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
           F+ +L  YNVL      A   + A +    +ER G    D  T+  +++   +    + A
Sbjct: 309 FEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDA 368

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             +L +M  KGV+       ++++S  K+G ++E++   + + + G+   V +Y+ L   
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
             + G    A    ++M+ +G++    T N +L+      + E A         RG   D
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
            V+Y T++  Y +    + A +L+ +M E+ + P++ +Y T+IKG   +ER  +A+   +
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN 548

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           E     + P+  TY  ++   C  G +    +   +MVE    P D      L+   C  
Sbjct: 549 EFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKP-DVVTCNTLMNGLCLH 607

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G L+ A  + ++ +      +   Y  LI++ CK    D A+   D +  K         
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVK--------G 659

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFE 435
           L  +A +YN ++  L   G++ +A     +L   G L       L++       P SA E
Sbjct: 660 LQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLK-------PSSADE 712

Query: 436 --IVKIMGRRGVPRDADAYICLIESYLRK-------GEPADAKTALDSMIEDGHSPASSL 486
             + +  G+        A    +E+Y+ +       G+  +AK  LD M++ G     S 
Sbjct: 713 ADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCST 772

Query: 487 FRSVMESLFEDGRVQT 502
           + ++ME L +  + QT
Sbjct: 773 YITLMEGLIKRQKRQT 788


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 230/493 (46%), Gaps = 15/493 (3%)

Query: 26  VYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            YN ++HG  +S   + A+ F + +   G+   D  T+  +++ L + G+   AR +   
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K+G++ +   +  L++ Y  KG + E   + D+M + G+  +   +  L     ++G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F+KM  +G+ P   TY  ++     S ++E A+R+FE M    +S   + YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+    F K D+A++L  EM ++ I    I + ++I  +    R  ++ ++FD M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           VKP+ +TY+ L+ G C AGKM E  K+L  MV   + P D   +  L+   CK   +  A
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-DCVTYNTLINGYCKISRMEDA 568

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             + + M    +  +   Y I+++   +      A +L   + E        S   +E S
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE--------SGTQLELS 620

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN ++  LC N  T +A   F+ L    + L+   FN +I    K G  D A ++   +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  D   Y  + E+ + +G   +      SM E+G +  S +  S++  L + G +
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740

Query: 501 QTASRVMKSMVEK 513
             A   +  + EK
Sbjct: 741 TRAGTYLFMIDEK 753



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 147/643 (22%), Positives = 282/643 (43%), Gaps = 67/643 (10%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI-FDIMKQLGVERSVKS 128
           G+L+     L ++ KKG + D   F  L++         +++ I    M QLG   +V S
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEG--IEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           Y+ L K +    R   A      M  +G    P   +Y  ++ GFF    L+ A   + +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M  RGI  +VVTY+++I    + + MD+A ++   M +  + P   +Y +++ GY +  +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK------ 300
             +A+    +M S  V+P+ VTY +L+  LC  G+  E +K+   M +R + P+      
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 301 ----------------------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
                                       ++ VF  L+    K G ++ A  V   M +  
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   YG +I   CK+   + A++  ++++++   L P + +      YN +I  LC 
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER--LSPGNIV------YNSLIHSLCI 456

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  KA+    +++ +G+ LD + FN++I  H KEG    + ++  +M R GV  D   
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+ Y   G+  +A   L SM+  G  P    + +++    +  R++ A  + + M 
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNFDSLLSVLSEKGKTI 568
             GV  ++     IL+ L        A      + +SG+   +  ++ +L  L +   T 
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636

Query: 569 AAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS---- 623
            A+++  + CL  D  ++  ++  ++ ALL  G+   A  +   +   G V D ++    
Sbjct: 637 EALRMFQNLCL-TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 624 SDKLI------------AGLNQEGNTKQADILSRMIRGEMSRG 654
           ++ LI              + + G T  + +L+ ++R  + RG
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 130/575 (22%), Positives = 252/575 (43%), Gaps = 21/575 (3%)

Query: 82  MPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
           MP  G     D+  +  +I  + K+G + ++   +  M   G+  +V +Y ++   + + 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                A      M+  G+ P   TYN ++ G+  S + + AI F + M S G+  DVVTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N++++   +  +  EA K+F  M ++ ++P + +Y T+++GY       +   + D M  
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + PN   ++ L+      GK+ +   V  +M ++ + P D   +  ++G+ CKSG + 
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-DTVTYGTVIGILCKSGRVE 426

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A    + MI   +      Y  LI + C  + +D+A +L+ +++++ I L        +
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL--------D 478

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              +N +I   C  G+  ++E  F  +++ GV  D + ++ LI G+   G  D A +++ 
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G+  D   Y  LI  Y +     DA      M   G SP    +  +++ LF+  
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL------GRIDLMMQSGSVP 552
           R   A  +   + E G +  L     IL  L      +EAL         DL +++ +  
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT-- 656

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F+ ++  L + G+   A  L         + D+ +Y  + + L+  G       +   +
Sbjct: 657 -FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 715

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            E G   + +  + ++  L Q G+  +A     MI
Sbjct: 716 EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 229/509 (44%), Gaps = 29/509 (5%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L +   ++ A  +L  M K GV  +   +  ++  Y   G  +E++     M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              GVE  V +Y++L   + + GR   A++ F+ M   G++P   TY  +L G+     L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                  + M   GI  +   ++ +I  Y +  K+D+A  +F++M+++ + P  ++Y T+
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I       R +DA+R F++M    + P  + Y +L+  LC   K  + ++++ EM++R I
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D   F  ++   CK G +  +  +   M+R+ +  +   Y  LI+ +C A   D A 
Sbjct: 476 -CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 358 KLLDKLVEKEI----------------ILRPQSTL----DMEAS-------SYNPMIQHL 390
           KLL  +V   +                I R +  L    +ME+S       +YN ++Q L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
               +T  A+  +  + + G  L+   +N ++ G  K    D A  + + +    +  + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             +  +I + L+ G   +AK    ++  +G  P    +  + E+L E G ++    +  S
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEA 538
           M E G   N  ++  I+  LL RG +  A
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 203/425 (47%), Gaps = 12/425 (2%)

Query: 79  LLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           LLD M + G+  +  +F +LI +Y K+G V +++ +F  M+Q G+     +Y  +  ++ 
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A RYF +M+ E + P    YN ++    +  K + A     +M  RGI LD +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +N++I+ + +  ++ E+EKLF  M    ++P +I+Y+T+I GY    + D+A ++   M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  +KP+ VTY  L+ G C   +M +   + REM    + P   +  + L G+  ++  
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF-QTRR 599

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             AA ++   +       E   Y I++   CK  + D A+++   L   +        L 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--------LQ 651

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
           +E  ++N MI  L   G+  +A+  F  L   G++  V  ++ +     ++G  +   ++
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G   ++     ++   L++G+   A T L  MI++ H    +   S+   L  
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYL-FMIDEKHFSLEASTASLFLDLLS 770

Query: 497 DGRVQ 501
            G+ Q
Sbjct: 771 GGKYQ 775



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 206/465 (44%), Gaps = 19/465 (4%)

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           ++ ++ TY  +I       ++D        + +K      I++T ++KG  A +R  DA+
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 252 RI-FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY--IPPKDNSVFMKL 308
            I    M      PN  +Y  LL GLCD  +  E  ++L+ M +     PP D   +  +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP-DVVSYTTV 205

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +    K G L+ A      M+   I      Y  +I   CKA+  D+A+++L  +V+  +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           +  P         +YN ++   C +GQ  +A  F +++   GV  D V +N+L+    K 
Sbjct: 266 M--PN------CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G    A ++   M +RG+  +   Y  L++ Y  KG   +    LD M+ +G  P   +F
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++ +  + G+V  A  V   M ++G+  +      ++  L   G VE+A+   + M+ 
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
               P    ++SL+  L    K   A +L+   L R   +D   +  ++D+    G+ + 
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 605 AYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           +   LF +M + GV  D  +   LI G    G   +A  +L+ M+
Sbjct: 498 SEK-LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 156/350 (44%), Gaps = 12/350 (3%)

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           +V PN  TY  L+   C AG++      L  ++++     D   F  LL   C     + 
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGF-RVDAIAFTPLLKGLCADKRTSD 144

Query: 321 AAD-VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           A D VL+ M +L        Y IL++  C       A++LL  + +      P      +
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP------D 198

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             SY  +I      G   KA   + +++ +G+L + V ++++I    K    D A E++ 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M + GV  +   Y  ++  Y   G+P +A   L  M  DG  P    + S+M+ L ++G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           R   A ++  SM ++G+K  +     +L+    +G + E  G +DLM+++G  PN   F 
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
            L+   +++GK   A+ +      +    D  +Y  V+  L  +G+  +A
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428


>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 177/362 (48%), Gaps = 11/362 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI  LGR+GK+  A+ +      +G       F  LI +YGK G   E++K+F+ MK  G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252

Query: 122 VERSVKSYDALFKLILRRG-RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           ++ ++ +Y+A+     + G  +      F +ML  G++P R TYN +L         E A
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
              F +M  RGI  DV TYNT+++   +  +MD A ++  EM  K I P V++Y+TM  G
Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADG 372

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y    R +DAL +++EMK   +  + V+Y  LL      G+  +  KV +EM    +  K
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGV-KK 431

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  LL    K G  N    V K M +  +      Y  LI+ + K  +Y+ A+++ 
Sbjct: 432 DVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVF 491

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
            +          Q+ L  +   Y+ +I  LC NG    A +   ++ K+G+  + V +N+
Sbjct: 492 REF--------KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNS 543

Query: 420 LI 421
           +I
Sbjct: 544 II 545



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 179/378 (47%), Gaps = 11/378 (2%)

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + MI+   R  K++ A+ +F     +    TV +++ +I  Y      D+A+++F+ MK 
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250

Query: 260 FDVKPNAVTYTALLPGLCDAG-KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
             +KPN VTY A++      G +   V ++  EM+   + P D   +  LL V  + G  
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQP-DRITYNSLLAVCSRGGLW 309

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            AA ++   MI   I  +   Y  L++  CK    D A +++ ++  K+I+  P      
Sbjct: 310 EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKIL--PNVV--- 364

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
              +Y+ M       G+   A   + ++   G+ LD V++N L+  ++K G  + A ++ 
Sbjct: 365 ---TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC 421

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           K MG  GV +D   Y  L++ Y ++G+  +       M +D   P    + ++++   + 
Sbjct: 422 KEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKG 481

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
              + A  V +   + G+K ++ L ++++ AL   G V+ A+  +D M + G  PN  + 
Sbjct: 482 SLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTY 541

Query: 558 LSVLSEKGKTIAAVKLLD 575
            S++   G++  A  L+D
Sbjct: 542 NSIIDAFGRSTTAEFLVD 559



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 9/292 (3%)

Query: 13  KIRALVPQFDHNLVYNVL-----HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILG 67
           K+  L P     + YN +      G    +  ++ F  + R G+   DR T+  ++ +  
Sbjct: 249 KVSGLKPNL---VTYNAVIDACGKGGVEFKRVVEIFEEMLRNGV-QPDRITYNSLLAVCS 304

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R G    AR +  +M  +G+  D   +  L+++  K G +  + +I   M    +  +V 
Sbjct: 305 RGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVV 364

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y  +     + GR   A   +N+M   GI   R +YN +L  +    + E A++  ++M
Sbjct: 365 TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM 424

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            S G+  DVVTYN +++GY +  K +E  ++F EMK+  + P +++Y+T+I  Y      
Sbjct: 425 GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLY 484

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           ++A+ +F E K   +K + V Y+ L+  LC  G +     +L EM +  I P
Sbjct: 485 EEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRP 536



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 124/237 (52%), Gaps = 8/237 (3%)

Query: 45  WVERAGLFN--------HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           W     LFN         D  T+  +++ + + G+++ A  I+L+MP K +  +   +  
Sbjct: 309 WEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYST 368

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           + + Y K G +++++ +++ MK LG+     SY+ L  +  + GR+  A +   +M S G
Sbjct: 369 MADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           ++    TYN +L G+    K     R F++MK   +  +++TY+T+I+ Y++    +EA 
Sbjct: 429 VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAM 488

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           ++F E K+  ++  V+ Y+ +I         D A+ + DEM    ++PN VTY +++
Sbjct: 489 EVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSII 545



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 91/184 (49%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  M +   + G+L  A  +  +M   G+  D   +  L+  Y K G  ++++K+   M
Sbjct: 365 TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM 424

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              GV++ V +Y+AL     ++G++    R F +M  + + P   TY+ ++  +      
Sbjct: 425 GSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLY 484

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A+  F + K  G+  DVV Y+ +IN   +   +D A  L  EM ++ I P V++Y ++
Sbjct: 485 EEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSI 544

Query: 238 IKGY 241
           I  +
Sbjct: 545 IDAF 548



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 130/304 (42%), Gaps = 48/304 (15%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL  +  ++  G+   DR ++  ++ I  ++G+   A  +  +M   GV+ D   +  
Sbjct: 380 EDALNLYNEMKFLGI-GLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNA 438

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L++ YGK+G   E  ++F  MK+  V  ++ +Y  L  +  +   Y  A   F +    G
Sbjct: 439 LLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR-------- 208
           ++     Y+ ++     +  +++A+   ++M   GI  +VVTYN++I+ + R        
Sbjct: 499 LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLV 558

Query: 209 ------------------FKKMDEAE---------KLFAEMKEKNIEPTVISYTTMIKGY 241
                              + +DE+E         K + ++  +   P         K  
Sbjct: 559 DGVGASNERQSESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAK-------KER 611

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           +  E     L +F +M   ++KPN VT++A+L   C   K +E   +L E +  +    D
Sbjct: 612 LGKEEIRSILSVFKKMHELEIKPNVVTFSAILNA-CSRCKSIEDASMLLEELRLF----D 666

Query: 302 NSVF 305
           N V+
Sbjct: 667 NQVY 670



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I +  R G+   AK   ++ + +G+      F +++ +  + G    A +V +SM   G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252

Query: 515 VKENLDLVAKILEALLMRGHVE--EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           +K NL     +++A   +G VE    +   + M+++G  P+   ++SLL+V S  G   A
Sbjct: 253 LKPNLVTYNAVIDAC-GKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEA 311

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           A  L +  + R    D+ +Y  +LDA+   G+   AY I+ ++  K
Sbjct: 312 ARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGK 357


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 230/493 (46%), Gaps = 15/493 (3%)

Query: 26  VYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            YN ++HG  +S   + A+ F + +   G+   D  T+  +++ L + G+   AR +   
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K+G++ +   +  L++ Y  KG + E   + D+M + G+  +   +  L     ++G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F+KM  +G+ P   TY  ++     S ++E A+R+FE M    +S   + YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+    F K D+A++L  EM ++ I    I + ++I  +    R  ++ ++FD M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           VKP+ +TY+ L+ G C AGKM E  K+L  MV   + P D   +  L+   CK   +  A
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-DCVTYNTLINGYCKISRMEDA 568

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             + + M    +  +   Y I+++   +      A +L   + E        S   +E S
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE--------SGTQLELS 620

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN ++  LC N  T +A   F+ L    + L+   FN +I    K G  D A ++   +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  D   Y  + E+ + +G   +      SM E+G +  S +  S++  L + G +
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740

Query: 501 QTASRVMKSMVEK 513
             A   +  + EK
Sbjct: 741 TRAGTYLFMIDEK 753



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/575 (22%), Positives = 252/575 (43%), Gaps = 21/575 (3%)

Query: 82  MPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
           MP  G     D+  +  +I  + K+G + ++   +  M   G+  +V +Y ++   + + 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                A      M+  G+ P   TYN ++ G+  S + + AI F + M S G+  DVVTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N++++   +  +  EA K+F  M ++ ++P + +Y T+++GY       +   + D M  
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + PN   ++ L+      GK+ +   V  +M ++ + P D   +  ++G+ CKSG + 
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-DTVTYGTVIGILCKSGRVE 426

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A    + MI   +      Y  LI + C  + +D+A +L+ +++++ I L        +
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL--------D 478

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              +N +I   C  G+  ++E  F  +++ GV  D + ++ LI G+   G  D A +++ 
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G+  D   Y  LI  Y +     DA      M   G SP    +  +++ LF+  
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL------GRIDLMMQSGSVP 552
           R   A  +   + E G +  L     IL  L      +EAL         DL +++ +  
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT-- 656

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F+ ++  L + G+   A  L         + D+ +Y  + + L+  G       +   +
Sbjct: 657 -FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 715

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            E G   + +  + ++  L Q G+  +A     MI
Sbjct: 716 EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 229/509 (44%), Gaps = 29/509 (5%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L +   ++ A  +L  M K GV  +   +  ++  Y   G  +E++     M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              GVE  V +Y++L   + + GR   A++ F+ M   G++P   TY  +L G+     L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                  + M   GI  +   ++ +I  Y +  K+D+A  +F++M+++ + P  ++Y T+
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I       R +DA+R F++M    + P  + Y +L+  LC   K  + ++++ EM++R I
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D   F  ++   CK G +  +  +   M+R+ +  +   Y  LI+ +C A   D A 
Sbjct: 476 -CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 358 KLLDKLVEKEI----------------ILRPQSTL----DMEAS-------SYNPMIQHL 390
           KLL  +V   +                I R +  L    +ME+S       +YN ++Q L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
               +T  A+  +  + + G  L+   +N ++ G  K    D A  + + +    +  + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             +  +I + L+ G   +AK    ++  +G  P    +  + E+L E G ++    +  S
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEA 538
           M E G   N  ++  I+  LL RG +  A
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 209/440 (47%), Gaps = 16/440 (3%)

Query: 79  LLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           LLD M + G+  +  +F +LI +Y K+G V +++ +F  M+Q G+     +Y  +  ++ 
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A RYF +M+ E + P    YN ++    +  K + A     +M  RGI LD +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +N++I+ + +  ++ E+EKLF  M    ++P +I+Y+T+I GY    + D+A ++   M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  +KP+ VTY  L+ G C   +M +   + REM    + P   +  + L G+  ++  
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF-QTRR 599

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             AA ++   +       E   Y I++   CK  + D A+++   L   +        L 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--------LQ 651

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
           +E  ++N MI  L   G+  +A+  F  L   G++  V  ++ +     ++G  +   ++
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G   ++     ++   L++G+   A T L  MI++ H    +   S+   L  
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYL-FMIDEKHFSLEASTASLFLDLLS 770

Query: 497 DGRVQTASRVM----KSMVE 512
            G+ Q   R +    KS +E
Sbjct: 771 GGKYQEYHRFLPEKYKSFIE 790



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 206/465 (44%), Gaps = 19/465 (4%)

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           ++ ++ TY  ++       ++D        + +K      I++T M+KG  A +R  DA+
Sbjct: 87  VTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAM 146

Query: 252 RI-FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY--IPPKDNSVFMKL 308
            I    M      PN  +Y  LL GLCD  +  E  ++L+ M +     PP D   +  +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPP-DVVSYTTV 205

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +    K G L+ A      M+   I      Y  +I   CKA+  D+A+++L  +V+  +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           +  P         +YN ++   C +GQ  +A  F +++   GV  D V +N+L+    K 
Sbjct: 266 M--PN------CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G    A ++   M +RG+  +   Y  L++ Y  KG   +    LD M+ +G  P   +F
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++ +  + G+V  A  V   M ++G+  +      ++  L   G VE+A+   + M+ 
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
               P    ++SL+  L    K   A +L+   L R   +D   +  ++D+    G+ + 
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 605 AYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           +   LF +M + GV  D  +   LI G    G   +A  +L+ M+
Sbjct: 498 SEK-LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 158/351 (45%), Gaps = 14/351 (3%)

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLN 319
           +V PN  TY  L+   C AG++      L  ++++ +I   D   F  +L   C     +
Sbjct: 86  EVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIV--DAIAFTPMLKGLCADKRTS 143

Query: 320 AAAD-VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            A D VL+ M +L        Y IL++  C       A++LL  + +      P      
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPP------ 197

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
           +  SY  +I      G   KA   + +++ +G+L + V ++++I    K    D A E++
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M + GV  +   Y  ++  Y   G+P +A   L  M  DG  P    + S+M+ L ++
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           GR   A ++  SM ++G+K  +     +L+    +G + E  G +DLM+++G  PN   F
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
             L+   +++GK   A+ +      +    D  +Y  V+  L  +G+  +A
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/532 (22%), Positives = 242/532 (45%), Gaps = 33/532 (6%)

Query: 5   AWTTRLQNKIRALVPQF-DHNLV--YNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           A T  L + +R L+P F  H+ +   N    + +      FF W+     F H  +++  
Sbjct: 47  AQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCA 106

Query: 62  MIEILG-----------------RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKK 104
           M   L                  R GK + A      +   G +    +F+ L+ +Y   
Sbjct: 107 MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDS 166

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
           G V ++++ F +++    +        L   ++     +    +++++L  G  P    Y
Sbjct: 167 GFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYY 226

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N+++  F     +  A   F +++ RG+    V++NT+ING  + + +DE  +L   M+E
Sbjct: 227 NILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEE 286

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
             I P V +Y+ +I G     R D A ++FDEM+   ++PN +T+TAL+ G C + ++  
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDS 346

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
                 +M+   + P D  ++  LL   CK G +N A  ++  M  + +  +   Y  LI
Sbjct: 347 AMNTYHQMLTMGVKP-DLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + +CK    + A+++   + E+ ++L        +  ++  +I   C +G+   AE   R
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVL--------DNVAFTALISGFCRDGRVRDAERTLR 457

Query: 405 QLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           ++++ G+  D   +  +I G+ K+GN    F+++K M   G       Y  L+    ++G
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQG 517

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           +  +A   L++M+  G +P    +  ++E   ++G+   A  ++K   EKG+
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK---AEDLLKLRNEKGL 566



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 177/367 (48%), Gaps = 13/367 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +LI  + K+G ++++  IF+ +++ G+  +  S++ L   + +        R    M 
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
              I P   TY+V++ G     +L+ A + F++M+ RG+  + +T+  +I+G  R +++D
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A   + +M    ++P ++ Y T++ G   V   + A ++ DEM+   +KP+ +TYT L+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  G +    ++ + M E  +   DN  F  L+   C+ G +  A   L+ M+   +
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGV-VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y ++I+ +CK        KLL     KE+ +           +YN ++  LC  
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLL-----KEMQINGHKP---GVITYNVLMNGLCKQ 516

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           GQ   A +    ++  GV  D + +N L+ GH K G    A +++K+   +G+  D   Y
Sbjct: 517 GQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYY 573

Query: 453 ICLIESY 459
             L+  Y
Sbjct: 574 TSLVSEY 580



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 179/367 (48%), Gaps = 13/367 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I    + G +  A+ I  ++ K+G++     F  LI    K   + E  ++   M++  
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +   V +Y  L   + + GR  +A++ F++M   G+ P   T+  ++ G   S ++++A+
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAM 348

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             +  M + G+  D+V YNT++NG  +   +++A KL  EM+   ++P  I+YTT+I GY
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGY 408

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 + A+ I   M    V  + V +TAL+ G C  G++ + ++ LREMVE  + P D
Sbjct: 409 CKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +  M + G  CK G++     +LK M           Y +L+   CK      A  LL+
Sbjct: 469 ATYTMVIDGY-CKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLE 527

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNL 420
            ++   + + P         +YN +++  C N   GKAE   +   +KG ++D   + +L
Sbjct: 528 AML--NLGVTPDDI------TYNILLEGHCKN---GKAEDLLKLRNEKGLIVDYAYYTSL 576

Query: 421 IRGHSKE 427
           +  ++K 
Sbjct: 577 VSEYNKS 583



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 161/337 (47%), Gaps = 6/337 (1%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L P     N + N L  ++N +   +  + +E   ++  D  T+  +I  L + G+L+
Sbjct: 252 RGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIY-PDVFTYSVLIHGLCKEGRLD 310

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +  +M ++G++ +   F  LI+   +   +  ++  +  M  +GV+  +  Y+ L 
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLL 370

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G    A++  ++M   G++P + TY  ++ G+     LE+A+   + M   G+ 
Sbjct: 371 NGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           LD V +  +I+G+ R  ++ +AE+   EM E  ++P   +YT +I GY          ++
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
             EM+    KP  +TY  L+ GLC  G+M     +L  M+   + P D+  +  LL   C
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP-DDITYNILLEGHC 549

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           K+G    A D+LK      +  +  +Y  L+  + K+
Sbjct: 550 KNGK---AEDLLKLRNEKGLIVDYAYYTSLVSEYNKS 583



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 92/440 (20%), Positives = 172/440 (39%), Gaps = 51/440 (11%)

Query: 210 KKMDEAEKLFAE-MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS--FDVKPNA 266
           K  D A  +FA  +       +   +  ++  Y       DA++ F  +++  F +  + 
Sbjct: 131 KGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHG 190

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
             Y  LL  + ++   V +     E++E   PPK    +  L+   CK G +  A  +  
Sbjct: 191 CGY--LLDKMINSNSPVTIWTFYSEILEYGFPPKV-QYYNILINKFCKEGSIRDAKLIFN 247

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            + +  +      +  LI   CK+   D   +L   + E  I          +  +Y+ +
Sbjct: 248 EIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIY--------PDVFTYSVL 299

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC  G+   AE  F ++ ++G+  + + F  LI G  +    DSA      M   GV
Sbjct: 300 IHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGV 359

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  L+    + G+   A+  +D M   G  P    + ++++   ++G +++A  
Sbjct: 360 KPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAME 419

Query: 506 VMKSMVEKGVKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
           + K M E+GV   LD VA   ++      G V +A   +  M+++G  P           
Sbjct: 420 IRKGMNEEGVV--LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP----------- 466

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
                                D A+Y  V+D     G     + +L ++   G      +
Sbjct: 467 ---------------------DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT 505

Query: 624 SDKLIAGLNQEGNTKQADIL 643
            + L+ GL ++G  K A++L
Sbjct: 506 YNVLMNGLCKQGQMKNANML 525



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 106/272 (38%), Gaps = 36/272 (13%)

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIM 440
           YN +I   C  G    A++ F ++ K+G L P  V+FN LI G  K  N D  F + K M
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRG-LRPTTVSFNTLINGLCKSRNLDEGFRLKKTM 284

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
               +  D   Y  LI    ++G    A+   D M + G  P    F ++++      R+
Sbjct: 285 EENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRI 344

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
            +A      M+  GVK +L +   +L  L   G V +A   +D M   G  P        
Sbjct: 345 DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKP-------- 396

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
                                   D  +Y  ++D     G   +A  I   + E+G V D
Sbjct: 397 ------------------------DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 621 WKSSDKLIAGLNQEGNTKQAD-ILSRMIRGEM 651
             +   LI+G  ++G  + A+  L  M+   M
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGM 464


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 224/494 (45%), Gaps = 50/494 (10%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F VLIE    + + +E+++ F  MK+  V    +S + L     R G+    KR+F  M
Sbjct: 69  LFSVLIE----EDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G +PT  TYN+M+        +E A   FE+MK RG+  D VTYN+MI+GY +  ++
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D+    F EMK  + EP VI+Y T+I  +    +    L  F EMK   +KPN V+Y+ L
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTL 244

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN------------- 319
           +   C    M +  K   +M    + P +++ +  L+   CK G+L+             
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHT-YTSLVDAYCKIGNLSDAFRLADEMSQVG 303

Query: 320 ----------------------AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
                                  A ++   M+   +      Y  LI  F KA+  DRA+
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           +LLD++  + I  +P   L      Y   I  LC   +   A++   ++ +KG+  +   
Sbjct: 364 ELLDEMKGRGI--KPDLLL------YGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFI 415

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  L+  + K  NP     +++ M    +   A  +  LI+   +    + A      + 
Sbjct: 416 YTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRIS 475

Query: 477 ED-GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            D G    ++++ ++++ L ++ +V+ A+ + + M +KG+  +      +++  L +G+V
Sbjct: 476 NDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNV 535

Query: 536 EEALGRIDLMMQSG 549
            +AL   D M + G
Sbjct: 536 VQALALRDKMAEIG 549



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 203/431 (47%), Gaps = 12/431 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N++ + +    + E A   F  ++  GL   D  T+  MI+  G+VG+L+       
Sbjct: 134 FTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIP-DTVTYNSMIDGYGKVGRLDDTVYFFE 192

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M     + D   +  LI  + K G + + ++ F  MKQ G++ +V SY  L     +  
Sbjct: 193 EMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKED 252

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A +++  M   G+ P  HTY  ++  +     L  A R  ++M   G+  +VVTY 
Sbjct: 253 MMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYT 312

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G    +++ EAE+LF +M    + P + SYT +I G+V  +  D AL + DEMK  
Sbjct: 313 ALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGR 372

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS-VFMKLLGVQCKSGHLN 319
            +KP+ + Y   +  LC   K+   + V+ EM E+ I  K N+ ++  L+    KS + +
Sbjct: 373 GIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGI--KANTFIYTTLMDAYFKSENPS 430

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
               +L+ M+ L I   A  + +LI+  CK ++  +AI    ++            L   
Sbjct: 431 EGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISN-------DFGLQAN 483

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
           A+ Y  MI  LC   Q   A   F Q+ +KG V D  A+ +LI G  K+GN   A  +  
Sbjct: 484 AAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRD 543

Query: 439 IMGRRGVPRDA 449
            M   GV   A
Sbjct: 544 KMAEIGVESGA 554



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 230/504 (45%), Gaps = 37/504 (7%)

Query: 6   WTTRLQNKIRALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           W+TR        VP F   + +++VL      E ALQ F  ++R  +F   R  +  ++ 
Sbjct: 53  WSTR-----NVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCN-GLLH 106

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
              R+GK +  +    DM   G +     + ++I+   K+G ++ +  +F+ MK  G+  
Sbjct: 107 KFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIP 166

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
              +Y+++     + GR      +F +M S   EP   TYN ++  F    KL   + FF
Sbjct: 167 DTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFF 226

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +MK  G+  +VV+Y+T+++ + +   M +A K + +M+   + P   +YT+++  Y  +
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKI 286

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
               DA R+ DEM    V+ N VTYTAL+ GLCD  ++ E +++  +MV   + P   S 
Sbjct: 287 GNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLAS- 345

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+    K+ +++ A ++L  M    I  +   YG  I + C  E  + A  +++++ 
Sbjct: 346 YTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQ 405

Query: 365 EKEIILRP---QSTLDMEASSYNP------------------------MIQHLCHNGQTG 397
           EK I        + +D    S NP                        +I  LC N    
Sbjct: 406 EKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVS 465

Query: 398 KAEIFFRQLMKKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
           KA  +F ++     L   A  +  +I G  KE   ++A  + + M ++G+  D  AY  L
Sbjct: 466 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSL 525

Query: 456 IESYLRKGEPADAKTALDSMIEDG 479
           I+  L++G    A    D M E G
Sbjct: 526 IDGKLKQGNVVQALALRDKMAEIG 549



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 208/487 (42%), Gaps = 49/487 (10%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           +DALF +++    +  A + F+KM    + P   + N +L  F    K +   RFF+DM 
Sbjct: 66  FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI 125

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             G    V TYN MI+   +   ++ A  LF EMK + + P  ++Y +MI GY  V R D
Sbjct: 126 GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           D +  F+EMKS   +P+ +TY  L+   C  GK+ +  +  REM +  + P   S +  L
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS-YSTL 244

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   CK   +  A      M RL +      Y  L++ +CK      A +L D++     
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEM----- 299

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKE 427
               Q  ++    +Y  +I  LC   +  +AE  F +++  GV+  +A +  LI G  K 
Sbjct: 300 ---SQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKA 356

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
            N D A E++  M  RG+  D   Y   I S     +   AK  ++ M E G    + ++
Sbjct: 357 KNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIY 416

Query: 488 RSVMESLFEDGR------------------------VQTASRVMKSMVEK---------- 513
            ++M++ F+                           V         +V K          
Sbjct: 417 TTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISN 476

Query: 514 --GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
             G++ N  +   +++ L     VE A    + M Q G VP+   + SL+    ++G  +
Sbjct: 477 DFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVV 536

Query: 569 AAVKLLD 575
            A+ L D
Sbjct: 537 QALALRD 543



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 154/376 (40%), Gaps = 54/376 (14%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           ++AL+ F +MK   V P   +   LL      GK   +++  ++M+     P   +VF  
Sbjct: 80  EEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKP---TVFTY 136

Query: 308 --LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             ++   CK G + AA+ + + M    +  +   Y  +I+ + K    D  +   +++  
Sbjct: 137 NIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM-- 194

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRG 423
           K +   P      +  +YN +I   C  G+  K   FFR+ MK+  L P  V+++ L+  
Sbjct: 195 KSMSCEP------DVITYNTLINCFCKFGKLPKGLEFFRE-MKQSGLKPNVVSYSTLVDA 247

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             KE     A +    M R G+  +   Y  L+++Y + G  +D                
Sbjct: 248 FCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSD---------------- 291

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
                              A R+   M + GV+ N+     +++ L     ++EA     
Sbjct: 292 -------------------AFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFG 332

Query: 544 LMMQSGSVPNFDSLLSVLSE--KGKTI-AAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M+ +G +PN  S  +++    K K +  A++LLD   GR    DL  Y   + +L    
Sbjct: 333 KMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLE 392

Query: 601 KTLNAYSILFKIMEKG 616
           K   A  ++ ++ EKG
Sbjct: 393 KIEAAKVVMNEMQEKG 408


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 230/493 (46%), Gaps = 15/493 (3%)

Query: 26  VYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            YN ++HG  +S   + A+ F + +   G+   D  T+  +++ L + G+   AR +   
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K+G++ +   +  L++ Y  KG + E   + D+M + G+  +   +  L     ++G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F+KM  +G+ P   TY  ++     S ++E A+R+FE M    +S   + YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+    F K D+A++L  EM ++ I    I + ++I  +    R  ++ ++FD M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           VKP+ +TY+ L+ G C AGKM E  K+L  MV   + P D   +  L+   CK   +  A
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-DCVTYNTLINGYCKISRMEDA 568

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             + + M    +  +   Y I+++   +      A +L   + E        S   +E S
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE--------SGTQLELS 620

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN ++  LC N  T +A   F+ L    + L+   FN +I    K G  D A ++   +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  D   Y  + E+ + +G   +      SM E+G +  S +  S++  L + G +
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740

Query: 501 QTASRVMKSMVEK 513
             A   +  + EK
Sbjct: 741 TRAGTYLFMIDEK 753



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 147/643 (22%), Positives = 282/643 (43%), Gaps = 67/643 (10%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI-FDIMKQLGVERSVKS 128
           G+L+     L ++ KKG + D   F  L++         +++ I    M QLG   +V S
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEG--IEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           Y+ L K +    R   A      M  +G    P   +Y  ++ GFF    L+ A   + +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M  RGI  +VVTY+++I    + + MD+A ++   M +  + P   +Y +++ GY +  +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK------ 300
             +A+    +M S  V+P+ VTY +L+  LC  G+  E +K+   M +R + P+      
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 301 ----------------------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
                                       ++ VF  L+    K G ++ A  V   M +  
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   YG +I   CK+   + A++  ++++++   L P + +      YN +I  LC 
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER--LSPGNIV------YNSLIHSLCI 456

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  KA+    +++ +G+ LD + FN++I  H KEG    + ++  +M R GV  D   
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+ Y   G+  +A   L SM+  G  P    + +++    +  R++ A  + + M 
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNFDSLLSVLSEKGKTI 568
             GV  ++     IL+ L        A      + +SG+   +  ++ +L  L +   T 
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636

Query: 569 AAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS---- 623
            A+++  + CL  D  ++  ++  ++ ALL  G+   A  +   +   G V D ++    
Sbjct: 637 EALRMFQNLCL-TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 624 SDKLI------------AGLNQEGNTKQADILSRMIRGEMSRG 654
           ++ LI              + + G T  + +L+ ++R  + RG
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 130/575 (22%), Positives = 252/575 (43%), Gaps = 21/575 (3%)

Query: 82  MPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
           MP  G     D+  +  +I  + K+G + ++   +  M   G+  +V +Y ++   + + 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                A      M+  G+ P   TYN ++ G+  S + + AI F + M S G+  DVVTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N++++   +  +  EA K+F  M ++ ++P + +Y T+++GY       +   + D M  
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + PN   ++ L+      GK+ +   V  +M ++ + P D   +  ++G+ CKSG + 
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-DTVTYGTVIGILCKSGRVE 426

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A    + MI   +      Y  LI + C  + +D+A +L+ +++++ I L        +
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL--------D 478

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              +N +I   C  G+  ++E  F  +++ GV  D + ++ LI G+   G  D A +++ 
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G+  D   Y  LI  Y +     DA      M   G SP    +  +++ LF+  
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL------GRIDLMMQSGSVP 552
           R   A  +   + E G +  L     IL  L      +EAL         DL +++ +  
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT-- 656

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F+ ++  L + G+   A  L         + D+ +Y  + + L+  G       +   +
Sbjct: 657 -FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 715

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            E G   + +  + ++  L Q G+  +A     MI
Sbjct: 716 EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 229/509 (44%), Gaps = 29/509 (5%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L +   ++ A  +L  M K GV  +   +  ++  Y   G  +E++     M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              GVE  V +Y++L   + + GR   A++ F+ M   G++P   TY  +L G+     L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                  + M   GI  +   ++ +I  Y +  K+D+A  +F++M+++ + P  ++Y T+
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I       R +DA+R F++M    + P  + Y +L+  LC   K  + ++++ EM++R I
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D   F  ++   CK G +  +  +   M+R+ +  +   Y  LI+ +C A   D A 
Sbjct: 476 -CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 358 KLLDKLVEKEI----------------ILRPQSTL----DMEAS-------SYNPMIQHL 390
           KLL  +V   +                I R +  L    +ME+S       +YN ++Q L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
               +T  A+  +  + + G  L+   +N ++ G  K    D A  + + +    +  + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             +  +I + L+ G   +AK    ++  +G  P    +  + E+L E G ++    +  S
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEA 538
           M E G   N  ++  I+  LL RG +  A
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 203/425 (47%), Gaps = 12/425 (2%)

Query: 79  LLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           LLD M + G+  +  +F +LI +Y K+G V +++ +F  M+Q G+     +Y  +  ++ 
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A RYF +M+ E + P    YN ++    +  K + A     +M  RGI LD +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +N++I+ + +  ++ E+EKLF  M    ++P +I+Y+T+I GY    + D+A ++   M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  +KP+ VTY  L+ G C   +M +   + REM    + P   +  + L G+  ++  
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF-QTRR 599

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             AA ++   +       E   Y I++   CK  + D A+++   L   +        L 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--------LQ 651

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
           +E  ++N MI  L   G+  +A+  F  L   G++  V  ++ +     ++G  +   ++
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G   ++     ++   L++G+   A T L  MI++ H    +   S+   L  
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYL-FMIDEKHFSLEASTASLFLDLLS 770

Query: 497 DGRVQ 501
            G+ Q
Sbjct: 771 GGKYQ 775



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 206/465 (44%), Gaps = 19/465 (4%)

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           ++ ++ TY  +I       ++D        + +K      I++T ++KG  A +R  DA+
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 252 RI-FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY--IPPKDNSVFMKL 308
            I    M      PN  +Y  LL GLCD  +  E  ++L+ M +     PP D   +  +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP-DVVSYTTV 205

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +    K G L+ A      M+   I      Y  +I   CKA+  D+A+++L  +V+  +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           +  P         +YN ++   C +GQ  +A  F +++   GV  D V +N+L+    K 
Sbjct: 266 M--PN------CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G    A ++   M +RG+  +   Y  L++ Y  KG   +    LD M+ +G  P   +F
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++ +  + G+V  A  V   M ++G+  +      ++  L   G VE+A+   + M+ 
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
               P    ++SL+  L    K   A +L+   L R   +D   +  ++D+    G+ + 
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 605 AYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           +   LF +M + GV  D  +   LI G    G   +A  +L+ M+
Sbjct: 498 SEK-LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 156/350 (44%), Gaps = 12/350 (3%)

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           +V PN  TY  L+   C AG++      L  ++++     D   F  LL   C     + 
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGF-RVDAIAFTPLLKGLCADKRTSD 144

Query: 321 AAD-VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           A D VL+ M +L        Y IL++  C       A++LL  + +      P      +
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP------D 198

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             SY  +I      G   KA   + +++ +G+L + V ++++I    K    D A E++ 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M + GV  +   Y  ++  Y   G+P +A   L  M  DG  P    + S+M+ L ++G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           R   A ++  SM ++G+K  +     +L+    +G + E  G +DLM+++G  PN   F 
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
            L+   +++GK   A+ +      +    D  +Y  V+  L  +G+  +A
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 138/581 (23%), Positives = 262/581 (45%), Gaps = 16/581 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D+E +   + +L       +A  +L +M   G    E  F  +I +  K+G V E++++ 
Sbjct: 74  DQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLK 133

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M   G   ++    +L K    +G    A    N++   G+ P + TY+V++ G   +
Sbjct: 134 DDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKN 193

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A  F+ +MK++GI   V + N+++ GY + +    A  +F +  E  +   V ++
Sbjct: 194 GNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTF 252

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++       + ++A  ++DE+ +  + PN V+Y  ++ G C    +    KV +EM++
Sbjct: 253 NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD 312

Query: 295 RYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
               P  N+V F  L+    K G +  A  +   M   +I       GI+I+  CKA   
Sbjct: 313 NGFTP--NAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 370

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
                L +K V +  +  P          YN +I      G    A   +R++ + G+  
Sbjct: 371 FEGRDLFNKFVSQGFV--PTCM------PYNTIIDGFIKEGNINLASNVYREMCEVGITP 422

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             V + +LI G  K  N D A +++  M R+G+  D  AY  LI+ + ++ +   A   L
Sbjct: 423 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 482

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           + +   G SP   ++ S++        V+ A  + K MV +G+  +L     +++ LL  
Sbjct: 483 NELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKS 542

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G +  A      M+  G +P+      L++ L  KG+   A K+L+   G++ I  +  Y
Sbjct: 543 GRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIY 602

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             ++      G    A+ +  +++++G V D  + D L+ G
Sbjct: 603 NTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 223/482 (46%), Gaps = 12/482 (2%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N   AL     +  +GL   ++ T+  +I+   + G +  A     +M  KG++      
Sbjct: 160 NLRSALVLVNEISESGLV-PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSL 218

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             ++E Y K    Q +  +F+   + G+  +V +++ L   + + G+   A   ++++++
Sbjct: 219 NSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIA 277

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
           +GI P   +YN ++ G      +  A + +++M   G + + VT+  +++GY +   ++ 
Sbjct: 278 KGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIEN 337

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A  +F  MK+ NI PT  +   +IKG     R+ +   +F++  S    P  + Y  ++ 
Sbjct: 338 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIID 397

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G    G +     V REM E  I P     +  L+   CK  +++ A  +L  M R  + 
Sbjct: 398 GFIKEGNINLASNVYREMCEVGITPS-TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 456

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   YG LI+ FCK      A +LL++L  +   L P   +      YN MI    +  
Sbjct: 457 MDIKAYGTLIDGFCKRRDMKSAHELLNEL--RGAGLSPNRFI------YNSMITGFKNMN 508

Query: 395 QTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
              +A   +++++ +G+  D   + +LI G  K G    A +I   M  +G+  D  A+ 
Sbjct: 509 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHT 568

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI     KG+  +A+  L+ M      P+  ++ +++   F++G +Q A R+   M+++
Sbjct: 569 VLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDR 628

Query: 514 GV 515
           G+
Sbjct: 629 GL 630



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 171/399 (42%), Gaps = 45/399 (11%)

Query: 65  ILGRVGKLN-HARC-ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           ILG   K N +A C +  +M   G   +   F +L++ Y KKG ++ +  IF  MK   +
Sbjct: 291 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             +  +   + K + + GR    +  FNK +S+G  PT   YN ++ GF     +  A  
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 410

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            + +M   GI+   VTY ++I+G+ +   +D A KL  +MK K ++  + +Y T+I G+ 
Sbjct: 411 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 470

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                  A  + +E++   + PN   Y +++ G  +   + E   + ++MV   IP  D 
Sbjct: 471 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPC-DL 529

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +  L+    KSG L  A+D+   M+   I  +   + +LI   C    ++ A K+L+ 
Sbjct: 530 KTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE- 588

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIR 422
                         DM   +  P +                           + +N LI 
Sbjct: 589 --------------DMNGKNMIPSV---------------------------LIYNTLIA 607

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           GH KEGN   AF +   M  RG+  D   Y  L+    +
Sbjct: 608 GHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 646



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 120/590 (20%), Positives = 238/590 (40%), Gaps = 84/590 (14%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S++  + L   ++R+     A+   NKML  G+     T +VML        +  A + F
Sbjct: 4   SIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHF 63

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
              K+RG+ LD   Y+  ++          A  L  EM+     P   ++T++I   V  
Sbjct: 64  LQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKE 123

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
               +ALR+ D+M +     N    T+L+ G C  G +     ++ E+ E  + P +   
Sbjct: 124 GNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVP-NKVT 182

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+   CK+G++  A +    M    I +       ++E + K + +  A  + +  +
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
           E  +             ++N ++  LC  G+  +A   + +++ KG+  + V++NN+I G
Sbjct: 243 ESGL---------ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILG 293

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE-----------------PA 466
           H ++ N ++A ++ K M   G   +A  +  L++ Y +KG+                 P 
Sbjct: 294 HCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPT 353

Query: 467 DAKTAL------------------DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
           D    +                  +  +  G  P    + ++++   ++G +  AS V +
Sbjct: 354 DTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYR 413

Query: 509 SMVEKGVK----------------ENLDLVAKIL-------------------EALLMRG 533
            M E G+                  N+DL  K+L                   +    R 
Sbjct: 414 EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRR 473

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            ++ A   ++ +  +G  PN   ++S+++          A+ L    +      DL +Y 
Sbjct: 474 DMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYT 533

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            ++D LL +G+ L A  I  +++ KG + D ++   LI GL  +G  + A
Sbjct: 534 SLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 583



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 4/166 (2%)

Query: 10  LQNKIRA--LVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL 66
           L N++R   L P +F +N +        N E A+  ++ +   G+   D +T+  +I+ L
Sbjct: 481 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI-PCDLKTYTSLIDGL 539

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
            + G+L +A  I  +M  KG+  D+    VLI     KG  + + KI + M    +  SV
Sbjct: 540 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSV 599

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
             Y+ L     + G    A R  ++ML  G+ P   TY++++ G F
Sbjct: 600 LIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKF 645


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 214/472 (45%), Gaps = 13/472 (2%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           + GV      + VLI+    +G+  E+ K+   M + G+  S   ++ + K +LR  ++ 
Sbjct: 322 RDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWE 381

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F+ ++  G+ P   TY  ++       K+  A+  ++ MK  G+   +VT ++++
Sbjct: 382 DAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLL 440

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            GY     MDEA KL++EM  K   P  ++YTT++KGY+  +  D A  + +EM    V 
Sbjct: 441 LGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVS 500

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMV-ERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
               TY  L+ GLC   ++ EV ++L+  V E ++P      +  ++    K+G + +A 
Sbjct: 501 CGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPT--TMTYNSIINGFVKAGMMGSAL 558

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            + + M    I      Y   I+ +C+    D A+KLL       I +R    +  + ++
Sbjct: 559 AMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLL-------IYMRCNG-IHPDIAA 610

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN  I   C  G    A  F   L+K G+   V  +N+ + G+        A +    M 
Sbjct: 611 YNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMI 670

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           ++ +  D + Y  LI+ + + G  A A      M+ + + P    F ++   L   G + 
Sbjct: 671 KQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDID 730

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            A R++  M    V  N      ++ A +  G ++EA    D M+ SG VP+
Sbjct: 731 GAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPD 782



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 133/614 (21%), Positives = 253/614 (41%), Gaps = 83/614 (13%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  KG   D  M++V++ +     +  ++V++FD M   GV+   + Y      + +  
Sbjct: 178 EMRCKGYYADAKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLR 237

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYN----------------------------------- 165
               A +   KM   G++P   TYN                                   
Sbjct: 238 DADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLA 297

Query: 166 -VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
             ++ G+ L  ++  A+  F++    G++   VTY  +I G +     DE  KL  +M E
Sbjct: 298 TTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIE 357

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIF------------------------------ 254
           + + P+   +  +IKG +  ++ +DA+ +F                              
Sbjct: 358 QGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEA 417

Query: 255 ----DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
               D+MK   VKP+ VT  +LL G C+ G M E  K+  EM  +  PP + + +  L+ 
Sbjct: 418 VNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVT-YTTLMK 476

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
              K    + A  +L  M +  +      Y ILI   C  +      ++L + V +  + 
Sbjct: 477 GYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFV- 535

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
            P +       +YN +I      G  G A   +RQ+ +KG+  + V + + I G+ +   
Sbjct: 536 -PTTM------TYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNC 588

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            D A +++  M   G+  D  AY   I  + ++G  + A   L  +++DG +P  +++ S
Sbjct: 589 CDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNS 648

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
            +        +  AS+   SM+++ +  + ++   +++     G+V  AL     M+ + 
Sbjct: 649 FVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANH 708

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
           ++P+   F +L   L   G    A +LLD     D   +  +Y  +++A +  GK   A+
Sbjct: 709 NIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAF 768

Query: 607 SILFKIMEKGGVTD 620
            +  K++  G V D
Sbjct: 769 QLHDKMLSSGVVPD 782



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 167/395 (42%), Gaps = 10/395 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI    K   V E+V ++D MK+ GV+ S+ +  +L      +G    A + +++M 
Sbjct: 401 YGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMP 460

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G  P   TY  ++ G+      + A     +M   G+S    TYN +ING     ++ 
Sbjct: 461 GKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVC 520

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           E +++      +   PT ++Y ++I G+V       AL ++ +M    + PN VTYT+ +
Sbjct: 521 EVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFI 580

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C         K+L  M    I P D + +   + + CK G+++ A   L  +++  +
Sbjct: 581 DGYCRTNCCDLAVKLLIYMRCNGIHP-DIAAYNAFINMFCKQGNMSHALHFLVLLLKDGL 639

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y   +  +   +M   A K    ++++ I          +   Y  +I      
Sbjct: 640 TPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIA--------ADTEIYTTLIDGFSKV 691

Query: 394 GQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G    A E++   L    + D   F  L  G  + G+ D A  ++  M R  V  +   Y
Sbjct: 692 GNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTY 751

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
             LI +++R G+  +A    D M+  G  P  + +
Sbjct: 752 NMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTY 786



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 191/440 (43%), Gaps = 13/440 (2%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + L+P  ++ NLV   L   K  E A+  F  V   G+   D  T+  +I  L +  K++
Sbjct: 358 QGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV--PDVFTYGCLIHWLSKHHKVH 415

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +   M + GV+        L+  Y +KG + E++K++  M   G   +  +Y  L 
Sbjct: 416 EAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLM 475

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           K  +++  +  A    N+M   G+    +TYN+++ G  +  ++       +   S G  
Sbjct: 476 KGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFV 535

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
              +TYN++ING+ +   M  A  ++ +M EK I P +++YT+ I GY      D A+++
Sbjct: 536 PTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKL 595

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
              M+   + P+   Y A +   C  G M      L  +++  + P + +V+   +    
Sbjct: 596 LIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTP-NVTVYNSFVTGYK 654

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
               +  A+    +MI+  I  +   Y  LI+ F K      A++L  +++    I    
Sbjct: 655 NLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNI---- 710

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
                +  ++  +   LC +G    A+     + +  V  + V +N LI  H ++G    
Sbjct: 711 ----PDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQE 766

Query: 433 AFEIVKIMGRRGVPRDADAY 452
           AF++   M   GV  D   Y
Sbjct: 767 AFQLHDKMLSSGVVPDDTTY 786



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 123/575 (21%), Positives = 243/575 (42%), Gaps = 22/575 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  +GV  D      L+ +  +     +++ +FD M+  G     K YD + +  +    
Sbjct: 144 MVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRM 203

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A R F++M   G++P    Y + + G       + A++    M+  G+     TYN+
Sbjct: 204 HGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNS 263

Query: 202 MINGYNRFKKMDEAEKLFAEM---KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           +++   +  +MDEA +L  +M     K ++  V   TT+++GY        AL +FDE  
Sbjct: 264 VVDVLVKVGRMDEALRLKDQMLLATGKKMD--VFLATTLMQGYCLHGEIGKALDLFDEAV 321

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
              V P  VTYT L+ G CDA  M  E  K+ R+M+E+ + P      + + G+  ++  
Sbjct: 322 RDGVTPTNVTYTVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLL-RNKQ 379

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
              A  +   ++   +P +   YG LI    K      A+ L DK+  KE  ++P     
Sbjct: 380 WEDAIALFDLVVDTGVP-DVFTYGCLIHWLSKHHKVHEAVNLWDKM--KEAGVKPSIV-- 434

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
               + + ++   C  G   +A   + ++  KG   + V +  L++G+ K+   D A+ +
Sbjct: 435 ----TCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYAL 490

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +  M + GV      Y  LI          +    L   + +G  P +  + S++    +
Sbjct: 491 LNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVK 550

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G + +A  + + M EKG+  N+      ++        + A+  +  M  +G  P+   
Sbjct: 551 AGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAA 610

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +++ +++  ++G    A+  L   L      ++  Y   +           A    + ++
Sbjct: 611 YNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMI 670

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           ++    D +    LI G ++ GN   A ++ S M+
Sbjct: 671 KQRIAADTEIYTTLIDGFSKVGNVAFALELYSEML 705



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 154/351 (43%), Gaps = 12/351 (3%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G ++ A  +  +MP KG   +E  +  L++ Y KK    ++  + + M Q GV     +Y
Sbjct: 447 GCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTY 506

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L   +    R         + +SEG  PT  TYN ++ GF  +  + +A+  +  M  
Sbjct: 507 NILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCE 566

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +GI+ ++VTY + I+GY R    D A KL   M+   I P + +Y   I  +        
Sbjct: 567 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSH 626

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           AL     +    + PN   Y + + G  +   M E  K    M+++ I   D  ++  L+
Sbjct: 627 ALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRI-AADTEIYTTLI 685

Query: 310 GVQCKSGHLNAAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
               K G++  A ++   M+   +IP +   +  L    C++   D A +LLD +   ++
Sbjct: 686 DGFSKVGNVAFALELYSEMLANHNIPDDKT-FTALTHGLCRSGDIDGAKRLLDDMTRLDV 744

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
              P +       +YN +I     +G+  +A     +++  GV+ D   +N
Sbjct: 745 C--PNTV------TYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYN 787



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 52/112 (46%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D E +  +I+   +VG +  A  +  +M       D+  F  L     + G +  + ++ 
Sbjct: 677 DTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLL 736

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           D M +L V  +  +Y+ L    +R G+   A +  +KMLS G+ P   TYN+
Sbjct: 737 DDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYNI 788


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 149/655 (22%), Positives = 289/655 (44%), Gaps = 65/655 (9%)

Query: 25  LVYNVLHGAKNSEHALQFFR-------WVERAGLFNH--DRETHLKMIEILGRVGKLNHA 75
           LV  +L   KN   AL  F        +     +F+H   R    K++  +GR+  L  A
Sbjct: 12  LVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRA 71

Query: 76  -RCIL--------------LDMPKKGVQWDEDM------------FEVLIESYGKKGIVQ 108
            RC                  MP + +   ++M            F  ++ ++ +    +
Sbjct: 72  QRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWR 131

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           E+   F   +  G+  ++++Y+ L K+  ++ ++   K     M   G+ P   +Y  ++
Sbjct: 132 EAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLI 191

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR---FKKMDEAEKLFAEMKEK 225
                S  L  A+  F++M  RG++ DV+ YN +I+G+ R   F K +E  K    + E 
Sbjct: 192 NALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRL--LTES 249

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
           ++ P+V +Y  MI G   + + D+++ +++ MK  +  P+  T+++++ GL  AG     
Sbjct: 250 SVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAA 309

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           +KV +EM+E  + P D   +  +L    ++G LN   ++   M +               
Sbjct: 310 EKVFQEMIESGLSP-DVRTYNAMLSGLFRTGKLNKCFELWNVMSK--------------N 354

Query: 346 NFCKAEMYDRAIK-LLD-KLVEKEII---LRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
           N C    Y+  I+ LLD K VE+ I    L  +  L  ++++Y  +I  LC NG   KA 
Sbjct: 355 NCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKAL 414

Query: 401 IFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
               +   +G  LD  A+++++ G  K+G  + A E++  M +     ++  +  LI  Y
Sbjct: 415 RILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGY 474

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
           +R  +  +A + L  M     +P    + +++  L +  R   A   +K M+E+G+K ++
Sbjct: 475 VRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDM 534

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDF 576
              + +++ L     V+ AL      +     P+    + ++  L    K   A+++   
Sbjct: 535 ITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQ 594

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
               +C+ DL ++  +++ L  AG  + A  I  +I+E G   D  S +    GL
Sbjct: 595 MRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGL 649



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 131/591 (22%), Positives = 262/591 (44%), Gaps = 49/591 (8%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           FF + + AG+ + + +T+  +I+I  +  +    + +L  M + G+  D   +  LI + 
Sbjct: 136 FFTYFQTAGM-SPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINAL 194

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE-GIEPT 160
            K G + ++V++FD M   GV   V  Y+ L    LR+G ++ A   + ++L+E  + P+
Sbjct: 195 AKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPS 254

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
             TYN+M+ G     KL+ ++  +  MK    S D+ T+++MI+G ++    + AEK+F 
Sbjct: 255 VETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQ 314

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           EM E  + P V +Y  M+ G     + +    +++ M   +   N V+Y  L+ GL D  
Sbjct: 315 EMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNK 373

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           K+ +     + + ER +   D++ +  L+   CK+G+LN A  +L+         +   Y
Sbjct: 374 KVEQAICYWQLLHERGL-KADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAY 432

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             ++   CK  M ++A++L                           I  +  N +   + 
Sbjct: 433 SSMVHGLCKKGMLEQAVEL---------------------------IHQMKKNRRKLNSH 465

Query: 401 IFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
           +F               N+LI G+ +    + A  +++ M  +       +Y  +I    
Sbjct: 466 VF---------------NSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLC 510

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           +    +DA  +L  M+E+G  P    +  +++ L    +V  A  +    + K +K +L 
Sbjct: 511 KAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQ 570

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFC 577
           +   I+  L     V+ AL     M Q   VP+    ++++  L + G  + A+K+ D  
Sbjct: 571 MHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRI 630

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
           L      D+ SY      L +  +  +A   L+  +++G + +  + + L+
Sbjct: 631 LEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 188/401 (46%), Gaps = 17/401 (4%)

Query: 28  NVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI-LLDMP 83
           +++HG   A N   A + F+ +  +GL + D  T+  M+  L R GKLN  +C  L ++ 
Sbjct: 295 SMIHGLSKAGNFNAAEKVFQEMIESGL-SPDVRTYNAMLSGLFRTGKLN--KCFELWNVM 351

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            K    +   + +LI+       V++++  + ++ + G++    +Y  L   + + G   
Sbjct: 352 SKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLN 411

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A R   +  +EG +     Y+ M+ G      LE A+     MK     L+   +N++I
Sbjct: 412 KALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLI 471

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NGY R  K++EA  +  EMK K+  PTV+SY T+I G    ER  DA     EM    +K
Sbjct: 472 NGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLK 531

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ +TY+ L+ GLC   K+     +  + + + + P D  +   ++   C +  ++ A +
Sbjct: 532 PDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKP-DLQMHNIIIHGLCTAQKVDVALE 590

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +   M +++   +   +  ++E   KA     A+K+ D+++E        + L  +  SY
Sbjct: 591 IFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILE--------AGLQPDIISY 642

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
           N   + LC   +   A  F    + +G+L +   +N L+R 
Sbjct: 643 NITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRA 683



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 110/265 (41%), Gaps = 35/265 (13%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  M+  L + G L  A  ++  M K   + +  +F  LI  Y +   ++E++ + 
Sbjct: 428 DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVL 487

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY---------- 164
             MK      +V SY+ +   + +  R+  A     +ML EG++P   TY          
Sbjct: 488 REMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRG 547

Query: 165 -------------------------NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                                    N+++ G   + K++ A+  F  M+      D+VT+
Sbjct: 548 EKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTH 607

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT++ G  +     EA K++  + E  ++P +ISY    KG  +  R  DA+    +   
Sbjct: 608 NTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALD 667

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVE 284
             + PNA T+  L+  + D   ++E
Sbjct: 668 RGILPNAPTWNVLVRAVVDDKPLME 692



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 170/432 (39%), Gaps = 43/432 (9%)

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P VIS T ++K   A +  + AL IFD                     C          V
Sbjct: 5   PKVISPTLVLKLLKAEKNPNAALAIFDSA-------------------CQHPGYAHPPFV 45

Query: 289 LREMVERYIPPK---DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
              ++ R + PK        + L+  Q  +   + A   +KA  + S+P +A +   L +
Sbjct: 46  FHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALN---LFQ 102

Query: 346 NFCKAEMYDRAIKLLDKLV----------EKEIILRPQSTLDMEAS--SYNPMIQHLCHN 393
           N       +  I+  + ++          E E+      T  M  +  +YN +I+  C  
Sbjct: 103 NMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKK 162

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            Q  K +     + + G+  D +++  LI   +K GN   A E+   M  RGV  D   Y
Sbjct: 163 RQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCY 222

Query: 453 ICLIESYLRKGEPADAKTALDSMI-EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
             LI+ +LRKG+   A      ++ E    P+   +  ++  L + G++  +  +   M 
Sbjct: 223 NILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMK 282

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           +     +L   + ++  L   G+   A      M++SG  P+   ++++LS L   GK  
Sbjct: 283 KNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLN 342

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
              +L +     +C  ++ SY  ++  LL   K   A      + E+G   D  +   LI
Sbjct: 343 KCFELWNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLI 401

Query: 629 AGLNQEGNTKQA 640
            GL + G   +A
Sbjct: 402 NGLCKNGYLNKA 413


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 146/586 (24%), Positives = 255/586 (43%), Gaps = 59/586 (10%)

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMMAK--- 146
           ED+   +I++Y K  +  +++  F  M+ + G +  V+SY+ L    +    +  A+   
Sbjct: 80  EDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFS 139

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
           RYF  M    + P   TYN+++       ++E AI   + M S+ +  DV +Y T+ING 
Sbjct: 140 RYFESM---DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGM 196

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM-KSFDVKPN 265
            +   +  A K+F EM  + +   V  Y  +I G+      D    I++ + K   V PN
Sbjct: 197 VKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPN 256

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMV--ERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            VTY  ++ GLC  G+  E  ++   M   ER    KD   +  L+   C++G+++ A  
Sbjct: 257 VVTYNIMINGLCKCGRFDESLEIWERMTKNER---EKDMFTYSSLIHGLCEAGNIDGAVR 313

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKA-------EMY----------------------- 353
           V K ++  S+  +A  +  ++  FC+A       E++                       
Sbjct: 314 VYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFE 373

Query: 354 ----DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK- 408
               + AI + + L +K    RP+ST      +Y  +I  LC NG+  KA   F++    
Sbjct: 374 NGKVEEAISIWELLCKKGC--RPEST------TYGVLIHGLCKNGRLNKALKIFKEAEDG 425

Query: 409 KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
            G LD  A+++++ G  KEG  D A  IV  M +RG   D      LI  ++R  +  DA
Sbjct: 426 PGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDA 485

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
                 M   G SP    + ++++ L +  R   A   +K M+EK  K ++   + +++ 
Sbjct: 486 INFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDG 545

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           L     +E AL      +  G  P+   ++ L+  L    K   A++L        C+ +
Sbjct: 546 LCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPN 605

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           L +   +++ L        A  I   I++ G   D  S +  I GL
Sbjct: 606 LVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGL 651



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 244/529 (46%), Gaps = 17/529 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +LI+   KK  +++++ + D M    ++  V SY  L   +++ G  + A + F++M 
Sbjct: 154 YNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMS 213

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKM 212
             G+      YN+++ GFF     +     +E + K   +  +VVTYN MING  +  + 
Sbjct: 214 VRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRF 273

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           DE+ +++  M +   E  + +Y+++I G       D A+R++ E+    +  +AVT+ A+
Sbjct: 274 DESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAM 333

Query: 273 LPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           L G C AGK+ E  ++   M  E        ++ +K L    ++G +  A  + + + + 
Sbjct: 334 LNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLF---ENGKVEEAISIWELLCKK 390

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
               E+  YG+LI   CK    ++A+K+      KE    P     ++A +Y+ M+  LC
Sbjct: 391 GCRPESTTYGVLIHGLCKNGRLNKALKIF-----KEAEDGPGK---LDAYAYSSMVDGLC 442

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G+  +A     Q+ K+G  LDP   N LI G  +    + A    + M  +G      
Sbjct: 443 KEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIV 502

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           +Y  LI+   +    ++A + +  M+E    P       +M+ L ++ +++ A  + +  
Sbjct: 503 SYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQA 562

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKT 567
           ++KG K ++ +   ++  L     +E+AL     M +S  VPN    ++L+  L +    
Sbjct: 563 LDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDY 622

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
             A ++ D  L      D+ SY   +  L +  +  +A   L   + +G
Sbjct: 623 EKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRG 671



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/467 (21%), Positives = 216/467 (46%), Gaps = 16/467 (3%)

Query: 180 AIRFFEDMKS-RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           A+  F++M+   G    V +YNT++N +    + D AE      +  ++ P + +Y  +I
Sbjct: 99  ALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILI 158

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           K     ++ + A+ + D M S ++KP+  +Y  L+ G+   G ++   KV  EM  R + 
Sbjct: 159 KISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVV 218

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR-LSIPTEAGHYGILIENFCKAEMYDRAI 357
             D + +  L+    K G  +   ++ + +++  S+      Y I+I   CK   +D ++
Sbjct: 219 A-DVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESL 277

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVA 416
           ++ +++ + E         + +  +Y+ +I  LC  G    A   ++++++   V+D V 
Sbjct: 278 EIWERMTKNE--------REKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVT 329

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
            N ++ G  + G    +FE+  +MG+    +   +Y  LI+     G+  +A +  + + 
Sbjct: 330 HNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELLC 388

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           + G  P S+ +  ++  L ++GR+  A ++ K   +   K +    + +++ L   G ++
Sbjct: 389 KKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMD 448

Query: 537 EALGRIDLMMQSGSV--PNF-DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA+  ++ M + G    P+  + L++      K   A+        + C   + SY  ++
Sbjct: 449 EAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLI 508

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             L  A +   AYS + +++EK    D  +   L+ GL QE   + A
Sbjct: 509 KGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMA 555



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/531 (21%), Positives = 234/531 (44%), Gaps = 50/531 (9%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++  +    +  E A+    W+    L   D  ++  +I  + +VG L  A  +  +M
Sbjct: 154 YNILIKISCKKQQIEKAISLLDWMWSQNL-KPDVFSYGTLINGMVKVGDLLGALKVFDEM 212

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD-IMKQLGVERSVKSYDALFKLILRRGR 141
             +GV  D   + +LI+ + K G   +  +I++ ++K   V  +V +Y+ +   + + GR
Sbjct: 213 SVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGR 272

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  +   + +M     E    TY+ ++ G   +  ++ A+R ++++    + +D VT+N 
Sbjct: 273 FDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNA 332

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           M+NG+ R  K+ E+ +L+  M ++N + TV+SY  +IKG     + ++A+ I++ +    
Sbjct: 333 MLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKG 391

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK-DNSVFMKLLGVQCKSGHLNA 320
            +P + TY  L+ GLC  G++ +  K+ +E  +   P K D   +  ++   CK G ++ 
Sbjct: 392 CRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDG--PGKLDAYAYSSMVDGLCKEGRMDE 449

Query: 321 AADVLKAM-------------------IRLSIPTEAGH----------------YGILIE 345
           A  ++  M                   +R S   +A +                Y  LI+
Sbjct: 450 AISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIK 509

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CKAE +  A   + +++EKE   +P    DM   S   ++  LC   +   A   ++Q
Sbjct: 510 GLCKAERFSEAYSFVKEMLEKE--WKP----DMITCSL--LMDGLCQEKKIEMALNLWQQ 561

Query: 406 LMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
            + KG   D   +N L+ G       + A ++   M R     +      L+E   +  +
Sbjct: 562 ALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRD 621

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
              A    D +++DG  P    +   ++ L    R+  A   +   + +G+
Sbjct: 622 YEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGI 672



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/399 (22%), Positives = 178/399 (44%), Gaps = 34/399 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L   G ++ A  +  ++ +  +  D      ++  + + G ++ES +++
Sbjct: 291 DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELW 350

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            +M +   + +V SY+ L K +   G+   A   +  +  +G  P   TY V++ G   +
Sbjct: 351 MVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKN 409

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN--IEPTVI 232
            +L  A++ F++ +     LD   Y++M++G  +  +MDEA  +  +M ++   ++P V 
Sbjct: 410 GRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVC 469

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +   +I G+V   + +DA+  F EM+     P  V+Y  L+ GLC A +  E    ++EM
Sbjct: 470 N--PLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEM 527

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           +E+   P   +  + + G+ C+   +  A ++ +  +      +   Y IL+   C    
Sbjct: 528 LEKEWKPDMITCSLLMDGL-CQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCK 586

Query: 353 YDRAIKLLDKLVEKEII--LRPQSTL--------DMEAS-----------------SYNP 385
            + A++L   +     +  L  ++TL        D E +                 SYN 
Sbjct: 587 LEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNI 646

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
            I+ LC   +   A  F    + +G+L   V +N L+R 
Sbjct: 647 TIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 137/278 (49%), Gaps = 5/278 (1%)

Query: 26  VYNVL-HG-AKNS--EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            Y VL HG  KN     AL+ F+  E  G    D   +  M++ L + G+++ A  I+  
Sbjct: 398 TYGVLIHGLCKNGRLNKALKIFKEAED-GPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQ 456

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K+G + D  +   LI  + +   +++++  F  M+  G   ++ SY+ L K + +  R
Sbjct: 457 MDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAER 516

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A  +  +ML +  +P   T ++++ G     K+E A+  ++    +G   D+  YN 
Sbjct: 517 FSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNI 576

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G     K+++A +L++ MK     P +++  T+++G   V   + A  I+D +    
Sbjct: 577 LMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDG 636

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           + P+ ++Y   + GLC   ++ +  + L + + R I P
Sbjct: 637 LHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILP 674



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/126 (21%), Positives = 62/126 (49%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           KG + D  M+ +L+        ++++++++  MK+     ++ + + L + + +   Y  
Sbjct: 565 KGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEK 624

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   ++ +L +G+ P   +YN+ + G     ++  AI F  D  +RGI    VT+N ++ 
Sbjct: 625 ASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVR 684

Query: 205 GYNRFK 210
               F+
Sbjct: 685 AAVNFR 690


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 197/409 (48%), Gaps = 12/409 (2%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K  V  D   F ++I+   + G   +  ++  ++++ G+  +V  Y  L     + G  M
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           +AK  F KM   G+ P  HTY+V++ GFF         + +E+MK  GI  +   YN +I
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           + Y     +D+A K+FAEM+EK I   V++Y  +I G    ++  +A+++  ++    + 
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           PN VTY  L+ G CD GKM    ++  ++    + P   + +  L+    K  +L  A D
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT-YNTLIAGYSKVENLAGALD 389

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           ++K M    I      Y ILI+ F +    ++A + +  L+EK       S L  +  +Y
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNYTEKACE-MHSLMEK-------SGLVPDVYTY 441

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           + +I  LC +G   +A   F+ L +   L P  V +N +I G+ KEG+   A  ++  M 
Sbjct: 442 SVLIHGLCVHGNMKEASKLFKSLGEMH-LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMV 500

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
             G+  +  ++   I    R  +  +A+  L  MI  G  P+ SL++ V
Sbjct: 501 HSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 153/296 (51%), Gaps = 3/296 (1%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M + G+  +   +  LI  Y   G+V ++ K+F  M++ G+   V +Y+ L   + R  
Sbjct: 253 NMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK 312

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           ++  A +  +K+   G+ P   TYN+++ GF    K++TA+R F  +KS G+S  +VTYN
Sbjct: 313 KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYN 372

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+I GY++ + +  A  L  EM+E+ I P+ ++YT +I  +  +   + A  +   M+  
Sbjct: 373 TLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKS 432

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+  TY+ L+ GLC  G M E  K+ + + E ++ P ++ ++  ++   CK G    
Sbjct: 433 GLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQP-NSVIYNTMIHGYCKEGSSYR 491

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
           A  +L  M+   +      +   I   C+ E +  A  LL +++     L+P  +L
Sbjct: 492 ALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSG--LKPSVSL 545



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 176/361 (48%), Gaps = 9/361 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   + G +  A+ +   M + G+  +   + VL+  + K+G+ +E  ++++ MK+ G
Sbjct: 199 LIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSG 258

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +  +Y+ L       G    A + F +M  +GI     TYN+++ G     K   A+
Sbjct: 259 IVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAV 318

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +    +   G+S ++VTYN +ING+    KMD A +LF ++K   + PT+++Y T+I GY
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY 378

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             VE    AL +  EM+   + P+ VTYT L+          E    +  ++E+     D
Sbjct: 379 SKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARL-NYTEKACEMHSLMEKSGLVPD 437

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   C  G++  A+ + K++  + +   +  Y  +I  +CK     RA++LL+
Sbjct: 438 VYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN 497

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
           ++V   ++  P        +S+   I  LC + +  +AE+   Q++  G+   V+   ++
Sbjct: 498 EMVHSGMV--PN------VASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549

Query: 422 R 422
            
Sbjct: 550 H 550



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/471 (22%), Positives = 200/471 (42%), Gaps = 48/471 (10%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +++ ++ +Y       +++     M   G      +++ L  L++R   +  A   FN++
Sbjct: 91  LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL 150

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            S+ +    +++ +M+ G   +       R    ++  G+S +VV Y T+I+G  ++  +
Sbjct: 151 KSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNV 209

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
             A+ LF +M    + P   +Y+ ++ G+       +  ++++ MK   + PNA  Y  L
Sbjct: 210 MLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL 269

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +   C+ G + +  KV  EM E+              G+ C          V+       
Sbjct: 270 ISEYCNGGMVDKAFKVFAEMREK--------------GIAC---------GVMT------ 300

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
                  Y ILI   C+ + +  A+KL+ K+   ++ L P         +YN +I   C 
Sbjct: 301 -------YNILIGGLCRGKKFGEAVKLVHKV--NKVGLSPNIV------TYNILINGFCD 345

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            G+   A   F QL   G L P  V +N LI G+SK  N   A ++VK M  R +     
Sbjct: 346 VGKMDTAVRLFNQLKSSG-LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKV 404

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  LI+++ R      A      M + G  P    +  ++  L   G ++ AS++ KS+
Sbjct: 405 TYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSL 464

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
            E  ++ N  +   ++      G    AL  ++ M+ SG VPN  S  S +
Sbjct: 465 GEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTI 515



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 168/395 (42%), Gaps = 21/395 (5%)

Query: 266 AVTYTALLPGLCDA----GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +TYT L   + +A        +    L  M+     P  N+ F  L+ +  +S + + A
Sbjct: 85  CLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNT-FNNLMCLLIRSNYFDKA 143

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   + +  +  +A  +GI+I+  C+A  + +  +LL  L  +E  L P   +     
Sbjct: 144 WWIFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAML--EEFGLSPNVVI----- 195

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            Y  +I   C  G    A+  F ++ + G++ +P  ++ L+ G  K+G     F++ + M
Sbjct: 196 -YTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENM 254

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
            R G+  +A AY CLI  Y   G    A      M E G +     +  ++  L    + 
Sbjct: 255 KRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKF 314

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSL 557
             A +++  + + G+  N+     ++      G ++ A+   + +  SG  P    +++L
Sbjct: 315 GEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTL 374

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           ++  S+      A+ L+     R       +Y  ++DA      T  A   +  +MEK G
Sbjct: 375 IAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACE-MHSLMEKSG 433

Query: 618 -VTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEM 651
            V D  +   LI GL   GN K+A  L + + GEM
Sbjct: 434 LVPDVYTYSVLIHGLCVHGNMKEASKLFKSL-GEM 467



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 103/224 (45%), Gaps = 3/224 (1%)

Query: 12  NKIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           NK+  L P    +N++ N        + A++ F  ++ +GL +    T+  +I    +V 
Sbjct: 325 NKV-GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGL-SPTLVTYNTLIAGYSKVE 382

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            L  A  ++ +M ++ +   +  + +LI+++ +    +++ ++  +M++ G+   V +Y 
Sbjct: 383 NLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYS 442

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L   +   G    A + F  +    ++P    YN M+ G+        A+R   +M   
Sbjct: 443 VLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           G+  +V ++ + I    R +K  EAE L  +M    ++P+V  Y
Sbjct: 503 GMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 683

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 136/556 (24%), Positives = 241/556 (43%), Gaps = 47/556 (8%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVL-HGAKNSEHALQFFRWVERAGL-FNHDRET 58
           +AER W  R+ ++  A + Q     V   L H A      ++ + W  R G  F  DR  
Sbjct: 53  LAERDWFARINSEFAAPLRQLGPRFVVRALQHAAGEPLLCVRLYVWASRFGQHFARDRSV 112

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
              + + L R G +  +  ++ D+   G +  E++   L+ES+G+ G+   + ++F  + 
Sbjct: 113 RRALGDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVP 172

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           +LG+  S   Y+A+    +R G    A   F +M ++G  P   TYN ++ G      ++
Sbjct: 173 RLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVD 232

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+R  + M+  GI  +VVTY  +++G+    +++EA  +   MKEK +  T  +Y +++
Sbjct: 233 EALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLV 292

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G       + A R+  E    D   +++ Y  LL  L       E  ++ ++M +R   
Sbjct: 293 HGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKR--- 349

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
                    LLG    S  +  A  VL++                  + C         +
Sbjct: 350 -------GYLLGSTTFSIVIPCAVKVLES-----------------SDLC---------E 376

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AF 417
           L+D  ++K   L      DM    Y  +I+         KA  +F Q++  G+L  V ++
Sbjct: 377 LVDDFIKKGGNL----GFDM----YIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESY 428

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N +I   +K G  + A E +K+M   G   +   +  LI  YL+ G   DAK  L  ++E
Sbjct: 429 NIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVME 488

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G  P    F S+++ L    ++  A      M E GV+ N+     ++  L   GHV +
Sbjct: 489 HGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSK 548

Query: 538 ALGRIDLMMQSGSVPN 553
           A+  ++ M   G  P+
Sbjct: 549 AIELLNKMKMDGITPD 564



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 148/316 (46%), Gaps = 12/316 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K+G       F ++I    K     +  ++ D   + G       Y  + K  LR   
Sbjct: 346 MSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKD 405

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A +YF++M+S+G+  +  +YN+++  F  + ++E A+   + M+  G S ++VT+NT
Sbjct: 406 ISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNT 465

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +INGY +   + +A+     + E  + P VI++T++I G     + DDA   F EM  + 
Sbjct: 466 LINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWG 525

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V+PN  TY  L+ GLC AG + +  ++L +M    I P   S    +L   C+   +  A
Sbjct: 526 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSF-CRMRKIEKA 584

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ--STLDME 379
             +   M R  +  ++  Y  LI+  C     D A         KEIIL  +  S +  +
Sbjct: 585 QKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA---------KEIILAMESISCIGTK 635

Query: 380 ASSYNPMIQHLCHNGQ 395
             +Y P++  L   G+
Sbjct: 636 QHTYWPVVGALTKMGR 651



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 118/236 (50%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           + ++ +I+   R   ++ A      M   G+    + + ++I+ + K G V+ +++   +
Sbjct: 391 DMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKV 450

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M++ G   ++ +++ L    L+ G    AK +   ++  G+ P   T+  ++ G   + +
Sbjct: 451 MQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQ 510

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           L+ A   F +M   G+  +V TYN +I+G      + +A +L  +MK   I P   S+  
Sbjct: 511 LDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNA 570

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
            I  +  + + + A ++F++M  + V P++ TY AL+  LCD  ++ E ++++  M
Sbjct: 571 PILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 626



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 118/317 (37%), Gaps = 45/317 (14%)

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
           LRP + +      YN +I      G    A + F+Q+   G   D   +N L+ G  + G
Sbjct: 176 LRPSTAI------YNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRG 229

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             D A  +VK M R G+  +   Y  L++ +       +A   L+ M E G S   + +R
Sbjct: 230 IVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYR 289

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGV--------------------KENLDLVAKILEA 528
           S++   F     + A R++   +E                       KE ++L  K+ + 
Sbjct: 290 SLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKR 349

Query: 529 LLMRGHV---------------EEALGRIDLMMQSGSVPNFDSLLSVLSE--KGKTIA-A 570
             + G                  +    +D  ++ G    FD  + ++    + K I+ A
Sbjct: 350 GYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKA 409

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            K     +    +  + SY  V+D    AG+   A   +  + E G   +  + + LI G
Sbjct: 410 NKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLING 469

Query: 631 LNQEGNTKQADILSRMI 647
             + GN   A    +M+
Sbjct: 470 YLKLGNVHDAKAFLKMV 486


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/569 (23%), Positives = 255/569 (44%), Gaps = 16/569 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG---VERSVKSYDALFKLILR 138
           MP+ G   D   +  LI+    +   QE++++   M   G      +V SY  +     +
Sbjct: 156 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFK 215

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G    A   F++M+ +G  P   TY+ ++ G   +  +  A    + M  +G+  +  T
Sbjct: 216 EGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRT 275

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN MI GY    +++EA +L  +M    ++P V++Y  +I+ Y  + R  +A  +FD M 
Sbjct: 276 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMV 335

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
               KPN+  Y  LL G    G +++V+ +L  M+   I P ++  F  L+    K G +
Sbjct: 336 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI-PFEHRAFNILICAYAKHGAV 394

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A      M +  +  +   Y  +I   CK    + A+   +++V +   L P      
Sbjct: 395 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEG--LSPNII--- 449

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
              S+  +I  LC  G+  K E    +++ +G+  D +  N ++    KEG    A +  
Sbjct: 450 ---SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF 506

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
            ++   GV  +  +Y  LI+ Y   G+  ++    D M+  G  P S  + +++   F++
Sbjct: 507 DMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKN 566

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNF 554
           GRV+ A  + + M  K VK        IL  L   G +  A      M+  G+   +  +
Sbjct: 567 GRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETY 626

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
           +++L  L E      A+++ +    ++  +D+ ++  V++ALL  G+   A S+   ++ 
Sbjct: 627 NTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVL 686

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           +G V    +   +I    +EG  +++D L
Sbjct: 687 RGPVPHVITYSLMIKSRIEEGLLEESDDL 715



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 125/556 (22%), Positives = 247/556 (44%), Gaps = 27/556 (4%)

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILR-------RGRYMMAKRYFNKMLSEGIE-- 158
           ++++ +FD +       SV +++++  ++ R       R    +A   FN M   G+   
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 159 -PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA-E 216
              R+   +++  F    +L+ A   F      G  +  VT N +I G    K+ D+A +
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS---FDVKPNAVTYTALL 273
            +F  M E    P V SY  +IKG    +++ +AL +   M +   ++  PN V+Y+ ++
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G    G++ +   +  EM+ +  PP D   +  L+   CK+  +N A  +L+ M    +
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPP-DVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGV 269

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y I+I  +C     + A++LL K+          S L  +  +Y  +IQ+ C  
Sbjct: 270 MPNTRTYNIMIRGYCSLGQLEEAVRLLKKM--------SGSGLQPDVVTYILLIQYYCKI 321

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+  +A   F  +++KG   +   ++ L+ G++ +G      +++ +M R G+P +  A+
Sbjct: 322 GRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAF 381

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI +Y + G    A TA   M ++G  P    + +V+  L + GRV+ A      MV 
Sbjct: 382 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVS 441

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           +G+  N+     ++  L   G  ++       M+  G  P+    ++++  L ++G+ + 
Sbjct: 442 EGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVE 501

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A    D  +      ++ SY  ++D     GK   +     +++  G   D  + + L+ 
Sbjct: 502 AQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLN 561

Query: 630 GLNQEGNTKQADILSR 645
           G  + G  + A  L R
Sbjct: 562 GYFKNGRVEDALALYR 577



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 215/478 (44%), Gaps = 11/478 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A++  + +  +GL   D  T++ +I+   ++G+   AR +   M +KG + +  ++ +
Sbjct: 290 EEAVRLLKKMSGSGL-QPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 348

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+  Y  KG + +   + D+M + G+    ++++ L     + G    A   F +M   G
Sbjct: 349 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 408

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   +Y+ ++       ++E A+  F  M S G+S +++++ ++I+G     +  + E
Sbjct: 409 LRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVE 468

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +L  EM  + I P  I   T++       R  +A   FD +    VKPN V+Y  L+ G 
Sbjct: 469 ELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGY 528

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  GKM E  K    MV   + P D+  +  LL    K+G +  A  + + M R  +   
Sbjct: 529 CFVGKMDESIKQFDRMVSIGLRP-DSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFC 587

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
           A    I++    +A     A +L  K+V++   LR +        +YN ++  LC N   
Sbjct: 588 AITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIE--------TYNTVLGGLCENSCV 639

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A   F  L  K   LD   FN +I    K G  D A  +   M  RG       Y  +
Sbjct: 640 DEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLM 699

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           I+S + +G   ++     SM ++G +  S +   ++  L E G V+ A   +  + EK
Sbjct: 700 IKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEK 757



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/552 (22%), Positives = 241/552 (43%), Gaps = 48/552 (8%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T+  +I+ L +   +N A  IL  M  KGV  +   + ++I  Y   G ++E+V
Sbjct: 234 FPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAV 293

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++   M   G++  V +Y  L +   + GR   A+  F+ M+ +G +P    Y+++L G+
Sbjct: 294 RLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGY 353

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
                L       + M   GI  +   +N +I  Y +   +D+A   F EM++  + P V
Sbjct: 354 ATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDV 413

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC-------------- 277
           +SY+T+I     + R +DA+  F++M S  + PN +++T+L+ GLC              
Sbjct: 414 VSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFE 473

Query: 278 --------DA-------------GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
                   DA             G++VE Q     ++   + P   S +  L+   C  G
Sbjct: 474 MINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVS-YNTLIDGYCFVG 532

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            ++ +      M+ + +  ++  Y  L+  + K    + A+ L  ++  K++        
Sbjct: 533 KMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDV-------- 584

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
              A + N ++  L   G+   A   + +++ +G  L    +N ++ G  +    D A  
Sbjct: 585 KFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALR 644

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           + + +  +    D   +  +I + L+ G   +AK+   +M+  G  P    +  +++S  
Sbjct: 645 MFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRI 704

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLMMQSGSVP 552
           E+G ++ +  +  SM + G   +  ++  I+  LL +G V  A   L +ID    S    
Sbjct: 705 EEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEAS 764

Query: 553 NFDSLLSVLSEK 564
               L+ ++SEK
Sbjct: 765 TAALLIPIVSEK 776



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/365 (22%), Positives = 176/365 (48%), Gaps = 4/365 (1%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           A  A+T   QN +R  V  +  + V ++L      E A+  F  +   GL + +  +   
Sbjct: 397 AMTAFTEMRQNGLRPDVVSY--STVIHILCKIGRVEDAVYHFNQMVSEGL-SPNIISFTS 453

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L  +G+      +  +M  +G+  D      ++++  K+G V E+   FD++  +G
Sbjct: 454 LIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIG 513

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V+ +V SY+ L       G+   + + F++M+S G+ P   TYN +L G+F + ++E A+
Sbjct: 514 VKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDAL 573

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             + +M  + +    +T N +++G  +  ++  A +L+ +M ++  +  + +Y T++ G 
Sbjct: 574 ALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGL 633

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 D+ALR+F++++S + + +  T+  ++  L   G++ E + +   MV R  P   
Sbjct: 634 CENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRG-PVPH 692

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++  + + G L  + D+  +M +     ++    ++I    +     RA   L 
Sbjct: 693 VITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLT 752

Query: 362 KLVEK 366
           K+ EK
Sbjct: 753 KIDEK 757


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 158/658 (24%), Positives = 275/658 (41%), Gaps = 77/658 (11%)

Query: 4   RAWTTRLQNKIRA---LVPQFDHNLVYNVLHGAK---NSEHALQFFRWVERAGLFNHDRE 57
           R  +TR  NK RA   L P      V ++        +   AL FF WV R   F H   
Sbjct: 32  RVISTRRWNKGRAYKRLAPFVTAAHVADLFRAPVAPLDPATALAFFEWVARRPGFRHTAA 91

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           +H  ++++L R               +    +D+ +   +I   G    ++E+V     +
Sbjct: 92  SHAALLQLLAR--------------RRAPANYDK-LVVSMISCSGTAEDMREAVDAIQAI 136

Query: 118 KQLGVER---SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           ++ G +R   S K Y+   + +LR        + +++++ EG+ P   TYN M+  +   
Sbjct: 137 RRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKE 196

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L  A R+F  ++  G+ +D  T N ++ GY R   + +A  L   M          SY
Sbjct: 197 GSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSY 256

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           T +I+G        +AL +   M      PN  TYT L+ GLC  G++ + + +L EM  
Sbjct: 257 TILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPR 316

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R + P   SV+                                  Y  +I+ +CK+    
Sbjct: 317 RGVVP---SVWT---------------------------------YNAMIDGYCKSG--- 337

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
              +L D L  K ++    +  + +  +YN +I  LC  G+  +AE      + +G    
Sbjct: 338 ---RLKDALGIKTLM--EGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPT 391

Query: 415 V-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           V  F N+I G+ K    D A  +  IM       D  AY  LI   ++K    +AK  L+
Sbjct: 392 VITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLN 451

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            +  +G SP   ++ S++++  + G+V  A  V K    +G + N    + ++  L+   
Sbjct: 452 EIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQ 511

Query: 534 HVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            + +A+  I  M + G  P    + +L+    +K +   A +L +         D  +Y 
Sbjct: 512 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 571

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK-QADILSRMI 647
            + DAL  +G+   AYS L K   KG V    +   L+ G ++ GNT+  A ++ +M+
Sbjct: 572 VLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMV 626



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 164/359 (45%), Gaps = 21/359 (5%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ + L  +  +E A  F   V++  +    + T+  +++   + G    A  ++  M
Sbjct: 570 YNVLTDALCKSGRAEEAYSFL--VKKGVVLT--KVTYTSLVDGFSKAGNTEFAAALIEKM 625

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G + D   + VL+++  K+  + E++ I D M   GV+ ++ +Y  +   +++ G++
Sbjct: 626 VNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKH 685

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             AK  FN+M+S G +P+  TY V +  +    ++E A     +M+  G++ DVVTYN  
Sbjct: 686 DHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVF 745

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA--------------- 247
           ING      MD A      M + + EP   +Y  ++K ++ +  A               
Sbjct: 746 INGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIK 805

Query: 248 -DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            D   ++ + M    + P AVTY++++ G C A ++ E   +L  M+ + I P +  ++ 
Sbjct: 806 LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEE-IYT 864

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
            L+   C       AA  +  MI          Y  LI   C    YD+A  L   L+E
Sbjct: 865 MLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLE 923



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 124/564 (21%), Positives = 239/564 (42%), Gaps = 55/564 (9%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  +I  Y K   + +++++  IM     +  +++Y  L  +++++ R   AK   N++ 
Sbjct: 395 FTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIF 454

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           + G+ P    Y  ++  +    K+  A+  F+  +  G   +  TY+++I G  + +K+ 
Sbjct: 455 ANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLH 514

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  L  +M+E  I P VI+YTT+I+G       D+A R+F+ M+   + P+   Y  L 
Sbjct: 515 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 574

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC +G+  E    L   V++ +       +  L+    K+G+   AA +++ M+    
Sbjct: 575 DALCKSGRAEEAYSFL---VKKGV-VLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGC 630

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             ++  Y +L++  CK +  + A+ +LD++  + +             +Y  +I  +   
Sbjct: 631 KADSHTYSVLLQALCKQKKLNEALSILDQMTLRGV--------KGNIVAYTIIISEMIKE 682

Query: 394 GQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+   A+  F +++  G     + +   I  + K G  + A  ++  M R GV  D   Y
Sbjct: 683 GKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTY 742

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
              I      G    A + L  MI+    P    +  +++  F    +  A  V  S + 
Sbjct: 743 NVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKH-FLKMSLANAHYVDTSGMW 801

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
             +K  LD V ++LE ++  G    A+              + S+++   +  +   A  
Sbjct: 802 NWIK--LDTVWQLLERMVKHGLNPTAV-------------TYSSIIAGFCKATRLEEACV 846

Query: 573 LLDFCLGRD-------------CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           LLD  LG+D             C  D+  +EK             A S +  ++E G   
Sbjct: 847 LLDHMLGKDISPNEEIYTMLIKCCCDIKLFEK-------------AASFVTNMIECGFQP 893

Query: 620 DWKSSDKLIAGLNQEGNTKQADIL 643
             +S   LI GL  EG+  +A  L
Sbjct: 894 HLESYHYLITGLCDEGDYDKAKAL 917



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 101/255 (39%), Gaps = 16/255 (6%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+   I    ++G++  A  ++ +M + GV  D   + V I   G  G +  +      M
Sbjct: 706 TYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRM 765

Query: 118 KQLGVERSVKSYDALFKLILR----RGRYMMAKRYFN------------KMLSEGIEPTR 161
                E +  +Y  L K  L+       Y+     +N            +M+  G+ PT 
Sbjct: 766 IDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTA 825

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
            TY+ ++ GF  + +LE A    + M  + IS +   Y  +I      K  ++A      
Sbjct: 826 VTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTN 885

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M E   +P + SY  +I G       D A  +F ++   D   N V +  L  GL  AG 
Sbjct: 886 MIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGH 945

Query: 282 MVEVQKVLREMVERY 296
           +    ++L  M  R+
Sbjct: 946 VDICSQLLSAMENRH 960


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 230/493 (46%), Gaps = 15/493 (3%)

Query: 26  VYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            YN ++HG  +S   + A+ F + +   G+   D  T+  +++ L + G+   AR +   
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K+G++ +   +  L++ Y  KG + E   + D+M + G+  +   +  L     ++G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F+KM  +G+ P   TY  ++     S ++E A+R+FE M    +S   + YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+    F K D+A++L  EM ++ I    I + ++I  +    R  ++ ++FD M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           VKP+ +TY+ L+ G C AGKM E  K+L  MV   + P D   +  L+   CK   +  A
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-DCVTYNTLINGYCKISRMEDA 568

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             + + M    +  +   Y I+++   +      A +L   + E        S   +E S
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE--------SGTQLELS 620

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN ++  LC N  T +A   F+ L    + L+   FN +I    K G  D A ++   +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  D   Y  + E+ + +G   +      SM E+G +  S +  S++  L + G +
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740

Query: 501 QTASRVMKSMVEK 513
             A   +  + EK
Sbjct: 741 TRAGTYLFMIDEK 753



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 147/643 (22%), Positives = 282/643 (43%), Gaps = 67/643 (10%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI-FDIMKQLGVERSVKS 128
           G+L+     L ++ KKG + D   F  L++         +++ I    M QLG   +V S
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEG--IEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           Y+ L K +    R   A      M  +G    P   +Y  ++ GFF    L+ A   + +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M  RGI  +VVTY+++I    + + MD+A ++   M +  + P   +Y +++ GY +  +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK------ 300
             +A+    +M S  V+P+ VTY +L+  LC  G+  E +K+   M +R + P+      
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 301 ----------------------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
                                       ++ VF  L+    K G ++ A  V   M +  
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   YG +I   CK+   + A++  ++++++   L P + +      YN +I  LC 
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER--LSPGNIV------YNSLIHSLCI 456

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
             +  KA+    +++ +G+ LD + FN++I  H KEG    + ++  +M R GV  D   
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+ Y   G+  +A   L SM+  G  P    + +++    +  R++ A  + + M 
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNFDSLLSVLSEKGKTI 568
             GV  ++     IL+ L        A      + +SG+   +  ++ +L  L +   T 
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636

Query: 569 AAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS---- 623
            A+++  + CL  D  ++  ++  ++ ALL  G+   A  +   +   G V D ++    
Sbjct: 637 EALRMFQNLCL-TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 624 SDKLI------------AGLNQEGNTKQADILSRMIRGEMSRG 654
           ++ LI              + + G T  + +L+ ++R  + RG
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 130/575 (22%), Positives = 252/575 (43%), Gaps = 21/575 (3%)

Query: 82  MPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
           MP  G     D+  +  +I  + K+G + ++   +  M   G+  +V +Y ++   + + 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
                A      M+  G+ P   TYN ++ G+  S + + AI F + M S G+  DVVTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N++++   +  +  EA K+F  M ++ ++P + +Y T+++GY       +   + D M  
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + PN   ++ L+      GK+ +   V  +M ++ + P D   +  ++G+ CKSG + 
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-DTVTYGTVIGILCKSGRVE 426

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A    + MI   +      Y  LI + C  + +D+A +L+ +++++ I L        +
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL--------D 478

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              +N +I   C  G+  ++E  F  +++ GV  D + ++ LI G+   G  D A +++ 
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G+  D   Y  LI  Y +     DA      M   G SP    +  +++ LF+  
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL------GRIDLMMQSGSVP 552
           R   A  +   + E G +  L     IL  L      +EAL         DL +++ +  
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT-- 656

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F+ ++  L + G+   A  L         + D+ +Y  + + L+  G       +   +
Sbjct: 657 -FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 715

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            E G   + +  + ++  L Q G+  +A     MI
Sbjct: 716 EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 229/509 (44%), Gaps = 29/509 (5%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L +   ++ A  +L  M K GV  +   +  ++  Y   G  +E++     M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              GVE  V +Y++L   + + GR   A++ F+ M   G++P   TY  +L G+     L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                  + M   GI  +   ++ +I  Y +  K+D+A  +F++M+++ + P  ++Y T+
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I       R +DA+R F++M    + P  + Y +L+  LC   K  + ++++ EM++R I
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D   F  ++   CK G +  +  +   M+R+ +  +   Y  LI+ +C A   D A 
Sbjct: 476 -CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 358 KLLDKLVEKEI----------------ILRPQSTL----DMEAS-------SYNPMIQHL 390
           KLL  +V   +                I R +  L    +ME+S       +YN ++Q L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
               +T  A+  +  + + G  L+   +N ++ G  K    D A  + + +    +  + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             +  +I + L+ G   +AK    ++  +G  P    +  + E+L E G ++    +  S
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEA 538
           M E G   N  ++  I+  LL RG +  A
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 209/440 (47%), Gaps = 16/440 (3%)

Query: 79  LLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           LLD M + G+  +  +F +LI +Y K+G V +++ +F  M+Q G+     +Y  +  ++ 
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A RYF +M+ E + P    YN ++    +  K + A     +M  RGI LD +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +N++I+ + +  ++ E+EKLF  M    ++P +I+Y+T+I GY    + D+A ++   M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  +KP+ VTY  L+ G C   +M +   + REM    + P   +  + L G+  ++  
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF-QTRR 599

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             AA ++   +       E   Y I++   CK  + D A+++   L   +        L 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--------LQ 651

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
           +E  ++N MI  L   G+  +A+  F  L   G++  V  ++ +     ++G  +   ++
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G   ++     ++   L++G+   A T L  MI++ H    +   S+   L  
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYL-FMIDEKHFSLEASTASLFLDLLS 770

Query: 497 DGRVQTASRVM----KSMVE 512
            G+ Q   R +    KS +E
Sbjct: 771 GGKYQEYHRFLPEKYKSFIE 790



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 206/465 (44%), Gaps = 19/465 (4%)

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           ++ ++ TY  +I       ++D        + +K      I++T ++KG  A +R  DA+
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 252 RI-FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY--IPPKDNSVFMKL 308
            I    M      PN  +Y  LL GLCD  +  E  ++L+ M +     PP D   +  +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP-DVVSYTTV 205

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +    K G L+ A      M+   I      Y  +I   CKA+  D+A+++L  +V+  +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
           +  P         +YN ++   C +GQ  +A  F +++   GV  D V +N+L+    K 
Sbjct: 266 M--PN------CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G    A ++   M +RG+  +   Y  L++ Y  KG   +    LD M+ +G  P   +F
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++ +  + G+V  A  V   M ++G+  +      ++  L   G VE+A+   + M+ 
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
               P    ++SL+  L    K   A +L+   L R   +D   +  ++D+    G+ + 
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 605 AYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           +   LF +M + GV  D  +   LI G    G   +A  +L+ M+
Sbjct: 498 SEK-LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 156/350 (44%), Gaps = 12/350 (3%)

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           +V PN  TY  L+   C AG++      L  ++++     D   F  LL   C     + 
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSD 144

Query: 321 AAD-VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           A D VL+ M +L        Y IL++  C       A++LL  + +      P      +
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP------D 198

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             SY  +I      G   KA   + +++ +G+L + V ++++I    K    D A E++ 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M + GV  +   Y  ++  Y   G+P +A   L  M  DG  P    + S+M+ L ++G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
           R   A ++  SM ++G+K  +     +L+    +G + E  G +DLM+++G  PN   F 
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
            L+   +++GK   A+ +      +    D  +Y  V+  L  +G+  +A
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/585 (23%), Positives = 265/585 (45%), Gaps = 21/585 (3%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
            L +M K+ +  D   F +LI     +G  ++S  +   M++ G   ++ +Y+ +     
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           ++GR+  A    + M  +G+     TYN+++     S +         DM+ R I  + V
Sbjct: 240 KKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEV 299

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYNT++NG++   K+  A +L  EM    + P  +++  +I G+++     +AL++F  M
Sbjct: 300 TYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMM 359

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           ++  +    V+Y  LL GLC   +  ++ +     ++R         +  ++   CK+G 
Sbjct: 360 EAKGLIGTEVSYGVLLDGLCKNAEF-DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST-L 376
           L+ A  +L  M +  I  +   Y  LI  FC+      A         KEI+ R     L
Sbjct: 419 LDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTA---------KEIVCRIYRVGL 469

Query: 377 DMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFE 435
                 Y+ +I + C  G   +   I+   +++    D   FN L+    K G    A E
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
            ++ M   G+  +A ++ CLI  Y   GE   A +  D M + GH P    + S+++ L 
Sbjct: 530 FMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           + G +  A + +KS+       +  +   ++ A+   G++++A+     M+Q   +P+  
Sbjct: 590 KGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSF 649

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII-DLASYEKVLDALLAAGKTLNAYSILFK 611
            + SL+S L  KGKT+ A+        R  ++ +   Y   +D +  AG+   A     +
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQ-WKAGFYFRQ 708

Query: 612 IMEKGGVT-DWKSSDKLIAGLNQEGNT-KQADILSRMIRGEMSRG 654
            M+K G+T D  +++ +I G ++ G   K  D+L  M  G  ++G
Sbjct: 709 QMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEM--GNQNQG 751



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 147/650 (22%), Positives = 273/650 (42%), Gaps = 53/650 (8%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           N D  T+  +I  L R  +      +L DM K+ +  +E  +  L+  +  +G V  + +
Sbjct: 260 NADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQ 319

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + + M   G+  +  +++AL    +  G +  A + F+ M ++G+  T  +Y V+L G  
Sbjct: 320 LLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLC 379

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
            + + + A  F+  MK  G+ +  +TY  MI+G  +   +DEA  +  EM +  I+P ++
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIV 439

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y+ +I G+  V R   A  I   +    + PN + Y+ L+   C  G + E  ++   M
Sbjct: 440 TYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAM 499

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           +     P D+  F  L+   CK+G +  A + ++ M    I   A  +  LI  +  +  
Sbjct: 500 ILEGNTP-DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGE 558

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGV 411
             +A  + D++ +    +    T      +Y  +++ LC  G    AE F + L      
Sbjct: 559 GLKAFSVFDEMTK----VGHHPTF----FTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAA 610

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP------ 465
           +D V  N LI    K GN D A  +   M +R +  D+  Y  LI    RKG+       
Sbjct: 611 VDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILF 670

Query: 466 ---ADAKTAL-----------DSMIEDGHSPASSLFRSVMESL----------------F 495
              A+A+  L           D M + G   A   FR  M+ L                 
Sbjct: 671 AKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYS 730

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
             G+++    ++  M  +    NL     +L     R HV  +      M+ SG +P+  
Sbjct: 731 RMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKL 790

Query: 556 SLLSV---LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
           +  S+   + E       +K+L   + R   +D  ++  ++    A G+   A+ ++  +
Sbjct: 791 TCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVM 850

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKEKKQK 662
              G   D  + D +++ LN+    ++    SRM+  EMS+     + +K
Sbjct: 851 TSLGISLDKNTCDAIVSVLNRNHRFQE----SRMVLHEMSKQGISPESRK 896



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 152/665 (22%), Positives = 269/665 (40%), Gaps = 103/665 (15%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMI--EILGRVGKLNHARCILLDMP------------- 83
           AL+F +WV +    + D    L  I   IL R    + AR IL ++              
Sbjct: 53  ALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 112

Query: 84  ---KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
               +    +  +F++LI  Y ++G++Q+S++IF +M                      G
Sbjct: 113 MATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLM----------------------G 150

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
            Y             G  P+ +T N +L     S +  +   F ++M  R I  DV T+N
Sbjct: 151 LY-------------GFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFN 197

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK-- 258
            +IN         ++  L  +M++    PT+++Y T++  Y    R   A+ + D M   
Sbjct: 198 ILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLK 257

Query: 259 -------SFD--------------------------VKPNAVTYTALLPGLCDAGKMVEV 285
                  +++                          + PN VTY  LL G  + GK++  
Sbjct: 258 GVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIA 317

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           +++L EM+   + P ++  F  L+      G+   A  +   M    +      YG+L++
Sbjct: 318 RQLLNEMLTFGLSP-NHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLD 376

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CK   +D A     ++    + +           +Y  MI  LC NG   +A +   +
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCV--------GRITYTGMIDGLCKNGFLDEAVVMLNE 428

Query: 406 LMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           + K G+ DP  V ++ LI G  + G   +A EIV  + R G+  +   Y  LI +  R G
Sbjct: 429 MSKDGI-DPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              +     ++MI +G++P    F  ++ SL + G+V  A   M+ M   G+  N     
Sbjct: 488 CLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFD 547

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGR 580
            ++      G   +A    D M + G  P F    SLL  L + G  IAA K L      
Sbjct: 548 CLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNV 607

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              +D      ++ A+  +G    A S+  +++++  + D  +   LI+GL ++G T  A
Sbjct: 608 PAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIA 667

Query: 641 DILSR 645
            + ++
Sbjct: 668 ILFAK 672



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 145/672 (21%), Positives = 269/672 (40%), Gaps = 75/672 (11%)

Query: 35   NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
            N + AL+ F  +E  GL   +  ++  +++ L +  + + AR   + M + GV      +
Sbjct: 348  NFKEALKMFHMMEAKGLIGTE-VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406

Query: 95   EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
              +I+   K G + E+V + + M + G++  + +Y AL     R GR   AK    ++  
Sbjct: 407  TGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYR 466

Query: 155  EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
             G+ P    Y+ +++       L+  IR +E M   G + D  T+N ++    +  K+ E
Sbjct: 467  VGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAE 526

Query: 215  AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
            AE+    M    I P  +S+  +I GY +      A  +FDEM      P   TY +LL 
Sbjct: 527  AEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586

Query: 275  GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSGHLNAAADVL-------- 325
            GLC  G ++  +K L+ +  + +P   ++V    L+   CKSG+L+ A  +         
Sbjct: 587  GLCKGGHLIAAEKFLKSL--QNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSI 644

Query: 326  ------------------KAMIRLSIPTEAGHYGILIEN----FC-----------KAEM 352
                              K +I +    EA   G L+ N     C           KA  
Sbjct: 645  LPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGF 704

Query: 353  YDRAIKLLDKLVEKEIILRPQSTLDMEA------------------------SSYNPMIQ 388
            Y R  + +DKL     ++   + +D  +                        ++YN ++ 
Sbjct: 705  YFR--QQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLH 762

Query: 389  HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
                      + + +R ++  G+L D +   ++I G  +    +   +I+K    RGV  
Sbjct: 763  GYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEV 822

Query: 448  DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
            D   +  LI      GE   A   ++ M   G S   +   +++  L  + R Q +  V+
Sbjct: 823  DRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVL 882

Query: 508  KSMVEKGVKENLDLVAKILEALLMRGHVEEA-LGRIDLMMQSGSVPNF--DSLLSVLSEK 564
              M ++G+         +L  L   G ++ A + + +++      PN    +++  L++ 
Sbjct: 883  HEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942

Query: 565  GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
            GK   A  LL   L    +  +AS+  ++      G    A  +   +   G   D  S 
Sbjct: 943  GKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSY 1002

Query: 625  DKLIAGLNQEGN 636
            + LI GL  +G+
Sbjct: 1003 NVLITGLCAKGD 1014



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 149/671 (22%), Positives = 275/671 (40%), Gaps = 69/671 (10%)

Query: 33   AKNSEHALQ--FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
             KN+E  L   F+  ++R G+    R T+  MI+ L + G L+ A  +L +M K G+  D
Sbjct: 379  CKNAEFDLARGFYMRMKRNGVC-VGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPD 437

Query: 91   EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
               +  LI  + + G ++ + +I   + ++G+  +   Y  L     R G      R + 
Sbjct: 438  IVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYE 497

Query: 151  KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
             M+ EG  P   T+NV++     + K+  A  F   M S GI  + V+++ +INGY    
Sbjct: 498  AMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSG 557

Query: 211  KMDEAEKLFAEMKEKNIEPTVISYTTMIKGY------VAVER------------------ 246
            +  +A  +F EM +    PT  +Y +++KG       +A E+                  
Sbjct: 558  EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCN 617

Query: 247  -----------ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
                        D A+ +F EM    + P++ TYT+L+ GLC  GK V      +E   R
Sbjct: 618  TLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEAR 677

Query: 296  YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
                 +  ++   +    K+G   A     + M +L +  +      +I+ + +    ++
Sbjct: 678  GNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEK 737

Query: 356  AIKLL---------DKLVEKEIILRPQSTLDMEASS---YNPMI-------QHLCHNGQT 396
               LL           L    I+L   S     ++S   Y  MI       +  C++   
Sbjct: 738  THDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIIL 797

Query: 397  GKAEI--------FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            G  E           +  + +GV +D   FN LI      G  + AF++V +M   G+  
Sbjct: 798  GICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISL 857

Query: 448  DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
            D +    ++    R     +++  L  M + G SP S  +  ++  L   G ++TA  V 
Sbjct: 858  DKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVK 917

Query: 508  KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEK 564
            + M+   +       + ++ AL   G  +EA   +  M++   VP   +F +L+ +  + 
Sbjct: 918  EEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKN 977

Query: 565  GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
            G    A++L          +DL SY  ++  L A G    A+ +  ++   G + +  + 
Sbjct: 978  GNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTY 1037

Query: 625  DKLIAGLNQEG 635
              L+ G+  +G
Sbjct: 1038 KALVGGILSQG 1048



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/384 (21%), Positives = 165/384 (42%), Gaps = 11/384 (2%)

Query: 39   ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
               F + +++ GL   D  T   MI+   R+GK+     +L +M  +    +   + +L+
Sbjct: 703  GFYFRQQMDKLGL-TRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILL 761

Query: 99   ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
              Y K+  V  S  ++  M   G+     +  ++   I       +  +     +  G+E
Sbjct: 762  HGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVE 821

Query: 159  PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
              RHT+N+++     + ++  A      M S GISLD  T + +++  NR  +  E+  +
Sbjct: 822  VDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMV 881

Query: 219  FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              EM ++ I P    Y  ++ G   V     A  + +EM +  + P  V  +A++  L  
Sbjct: 882  LHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 941

Query: 279  AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
             GK  E   +LR M++  + P   S F  L+ + CK+G++  A ++   M    +  +  
Sbjct: 942  CGKADEASLLLRSMLKMKLVPTIAS-FTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLV 1000

Query: 339  HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG-QTG 397
             Y +LI   C       A +L +++     +           ++Y  ++  +   G +  
Sbjct: 1001 SYNVLITGLCAKGDMAIAFELFEEMKRDGFL--------ANVTTYKALVGGILSQGTEFS 1052

Query: 398  KAEIFFRQLMKKGVLDPVAFNNLI 421
              +I  + L+ +G +  ++FN++I
Sbjct: 1053 GTDIILKDLLARGFITAMSFNHMI 1076



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 5/271 (1%)

Query: 26   VYNVL-HGAKNSEH---ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
             YN+L HG    +H   +   +R +  +G+   D+ T   +I  +     L     IL  
Sbjct: 756  TYNILLHGYSKRKHVSTSFMLYRSMILSGIL-PDKLTCYSIILGICESNMLEIGLKILKA 814

Query: 82   MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
               +GV+ D   F +LI      G +  +  + ++M  LG+     + DA+  ++ R  R
Sbjct: 815  FICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHR 874

Query: 142  YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
            +  ++   ++M  +GI P    Y  +L G      ++TA    E+M +  I    V  + 
Sbjct: 875  FQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESA 934

Query: 202  MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            M+    +  K DEA  L   M +  + PT+ S+TT++  +       +AL +   M +  
Sbjct: 935  MVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCG 994

Query: 262  VKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
            +K + V+Y  L+ GLC  G M    ++  EM
Sbjct: 995  LKLDLVSYNVLITGLCAKGDMAIAFELFEEM 1025



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/362 (21%), Positives = 151/362 (41%), Gaps = 20/362 (5%)

Query: 82   MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER---SVKSYDALFKLILR 138
            M K G+  D      +I+ Y + G ++   K  D++ ++G +    ++ +Y+ L     +
Sbjct: 710  MDKLGLTRDVVTTNAMIDGYSRMGKIE---KTHDLLFEMGNQNQGPNLTTYNILLHGYSK 766

Query: 139  RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            R     +   +  M+  GI P + T   ++ G   S  LE  ++  +    RG+ +D  T
Sbjct: 767  RKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHT 826

Query: 199  YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
            +N +I+      +++ A  +   M    I     +   ++       R  ++  +  EM 
Sbjct: 827  FNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMS 886

Query: 259  SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD--NSVFMKLLGVQCKSG 316
               + P +  Y  LL GLC  G +     V  EM+   I P +   S  ++ L    K G
Sbjct: 887  KQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA---KCG 943

Query: 317  HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
              + A+ +L++M+++ +      +  L+  FCK      A++L         ++     L
Sbjct: 944  KADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELR--------VVMSNCGL 995

Query: 377  DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFE 435
             ++  SYN +I  LC  G    A   F ++ + G L  V  +  L+ G   +G   S  +
Sbjct: 996  KLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTD 1055

Query: 436  IV 437
            I+
Sbjct: 1056 II 1057


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 206/463 (44%), Gaps = 9/463 (1%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           +H+  T+   I    R  +L+ A  IL  M K G          L+  +     + E+V 
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + D M ++G +    ++  L   + +  +   A     +M+ +G +P   TY  ++ G  
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
              + + A+     M+   I  DVV YNT+I+G  ++K MD+A  LF +M+ K I+P V 
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y  +I       R  DA R+  +M   ++ P+ V + AL+      GK+VE +K+  EM
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           V+      D   +  L+   CK   +    +V + M +  +      Y  LI  F +A  
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            D A  +  ++V   +   P      +  +YN ++  LC+NG    A + F  + K+ + 
Sbjct: 407 CDNAQMVFKQMVSDGV--HP------DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           LD V +  +I    K G  +  +++   +  +GV  +   Y  ++  + RKG   +A   
Sbjct: 459 LDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
              M EDG  P S  + +++ +   DG    ++ ++K M   G
Sbjct: 519 FVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 201/432 (46%), Gaps = 13/432 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           ++L+    HG + SE      + VE    +  D  T   ++  L +  K + A  ++  M
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMG--YQPDTVTFTTLVHGLFQHNKASEAVALVERM 206

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG Q D   +  +I    K+G    ++ + + M++  +E  V  Y+ +   + +    
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   FNKM ++GI+P   TYN ++       +   A R   DM  + I+ D+V +N +
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326

Query: 203 INGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           I+ + +  K+ EAEKL+ EM K K+  P V++Y T+IKG+   +R ++ + +F EM    
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           +  N VTYT L+ G   A      Q V ++MV   + P D   +  LL   C +G++  A
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP-DIMTYNILLDGLCNNGNVETA 445

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             V + M +  +  +   Y  +IE  CKA   +    L   L  K +  +P         
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV--KPN------VV 497

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y  M+   C  G   +A+  F ++ + G L +   +N LIR   ++G+  ++ E++K M
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557

Query: 441 GRRGVPRDADAY 452
              G   DA  +
Sbjct: 558 RSCGFAGDASTF 569



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 202/446 (45%), Gaps = 14/446 (3%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+  +  L   I +  ++ +      +M + GI    +TY++ +  F    +L  A+   
Sbjct: 74  SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
             M   G    +VT N+++NG+    ++ EA  L  +M E   +P  +++TT++ G    
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            +A +A+ + + M     +P+ VTY A++ GLC  G+      +L +M E+     D  +
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVI 252

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  ++   CK  H++ A D+   M    I  +   Y  LI   C    +  A +LL  ++
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIR 422
           EK I   P          +N +I      G+  +AE  + +++K     P  VA+N LI+
Sbjct: 313 EKNI--NPDLVF------FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  K    +   E+ + M +RG+  +   Y  LI  + +  +  +A+     M+ DG  P
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               +  +++ L  +G V+TA  V + M ++ +K ++     ++EAL   G VE+     
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKG 565
             +   G  PN   + +++S    KG
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKG 510



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 213/485 (43%), Gaps = 12/485 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ +  K       + + + M+ LG+  ++ +Y        RR +  +A     KM+
Sbjct: 78  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P+  T N +L GF    ++  A+   + M   G   D VT+ T+++G  +  K  
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  L   M  K  +P +++Y  +I G       D AL + ++M+   ++ + V Y  ++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC    M +   +  +M  + I P D   +  L+   C  G  + A+ +L  M+  +I
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKP-DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   +  LI+ F K      A KL D++V+ +           +  +YN +I+  C  
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP-------DVVAYNTLIKGFCKY 369

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +    FR++ ++G++ + V +  LI G  +  + D+A  + K M   GV  D   Y
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L++     G    A    + M +         + +++E+L + G+V+    +  S+  
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           KGVK N+     ++     +G  EEA      M + G +PN   +++L+      G   A
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549

Query: 570 AVKLL 574
           + +L+
Sbjct: 550 SAELI 554



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 1/145 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ + L    N E AL  F ++++  +   D  T+  MIE L + GK+     +   +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDM-KLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KGV+ +   +  ++  + +KG+ +E+  +F  MK+ G   +  +Y+ L +  LR G  
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVM 167
             +     +M S G      T+ ++
Sbjct: 548 AASAELIKEMRSCGFAGDASTFGLV 572


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 248/527 (47%), Gaps = 34/527 (6%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG------------ 86
            L+++ W+ +    +   E   K++  L    + +  R  L    + G            
Sbjct: 84  CLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAI 143

Query: 87  -----VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
                V  +  + ++L+ +Y      +   + F      G + S  S   L   +L+  R
Sbjct: 144 SMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 203

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
               +  + +M+   I+P   T+NV++     + K+  A    EDMK  G S +VV+YNT
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263

Query: 202 MINGYNRF---KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           +I+GY +     KM +A+ +  EM E ++ P + ++  +I G+   +    ++++F EM 
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
             DVKPN ++Y +L+ GLC+ GK+ E   +  +MV   + P +   +  L+   CK+  L
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP-NLITYNALINGFCKNDML 382

Query: 319 NAAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             A D+  ++  + ++PT    Y +LI+ +CK    D    L +++ E+E I+       
Sbjct: 383 KEALDMFGSVKGQGAVPTTR-MYNMLIDAYCKLGKIDDGFALKEEM-EREGIVP------ 434

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIV 437
            +  +YN +I  LC NG    A+  F QL  KG+ D V F+ L+ G+ ++G    A  ++
Sbjct: 435 -DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL--FRSVMESLF 495
           K M + G+      Y  +++ Y ++G    A T + + +E       ++  +  +++   
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGN-LKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
           + G+++ A+ ++  M+EKG+  N      + E ++ +G V +  G +
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 178/415 (42%), Gaps = 28/415 (6%)

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           + E ++ EM  + I+P V ++  +I       + + A  + ++MK +   PN V+Y  L+
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265

Query: 274 PGLCD---AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            G C     GKM +   VL+EMVE  + P + + F  L+    K  +L  +  V K M+ 
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSP-NLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +      Y  LI   C       AI + DK+V   +    Q  L     +YN +I   
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV----QPNL----ITYNALINGF 376

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C N    +A   F  +  +G +     +N LI  + K G  D  F + + M R G+  D 
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y CLI    R G    AK   D +   G  P    F  +ME     G  + A+ ++K 
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---------SVPNFDSLLSV 560
           M + G+K        +   ++M+G+ +E   +    M++          +V +++ LL  
Sbjct: 496 MSKMGLKPR-----HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            S+KGK   A  LL+  L +  + +  +YE V + ++  G   +    LF +  K
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTK 605



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 129/270 (47%), Gaps = 7/270 (2%)

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
           + A S  P++  L    ++   E  +++++++ +   V  FN +I    K G  + A ++
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245

Query: 437 VKIMGRRGVPRDADAYICLIESYLR---KGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           ++ M   G   +  +Y  LI+ Y +    G+   A   L  M+E+  SP  + F  +++ 
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            ++D  +  + +V K M+++ VK N+     ++  L   G + EA+   D M+ +G  PN
Sbjct: 306 FWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN 365

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              +++L++   +      A+ +     G+  +     Y  ++DA    GK  + +++  
Sbjct: 366 LITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKE 425

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++  +G V D  + + LIAGL + GN + A
Sbjct: 426 EMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 6/237 (2%)

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+  ++     +  FE  K  G  G    A +   L+ + L++   AD +     MI   
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA---LLMRGHVE 536
             P    F  V+ +L + G++  A  VM+ M   G   N+     +++    L   G + 
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           +A   +  M+++   PN   F+ L+    +      ++K+    L +D   ++ SY  ++
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           + L   GK   A S+  K++  G   +  + + LI G  +    K+A  +   ++G+
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 205/464 (44%), Gaps = 10/464 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I      G +  A+  L  +   G+  D   +   +  Y + G++  + ++F +M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G  R+  +Y AL   +L  G    A   F  M ++   P  H Y  M+ G   + + 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A    E+  S G   ++V YN +I+GY    +M+ A K+F  M      P V +YT +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G     + + A+ +F  M    ++PN VTYTAL+ G C+ G +    ++L  M    +
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D + F  L+   CK   +  A   L ++++  +      Y  LI+  CK    D A 
Sbjct: 314 VPNDWT-FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           +L+ K++ +  +         +A SY+ +I  LC   +  +A +    +M+KG+   PV 
Sbjct: 373 ELMQKMISEGFV--------PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  +I    +E   +   +I   M   G+  D   Y   + SY  +G   DA++ +  M+
Sbjct: 425 YTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           + G  P    + +++      G V  A    + MV KG K N D
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNED 528



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 229/529 (43%), Gaps = 20/529 (3%)

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
           R++++Y  L       G    AK++   +L  G+ P  + Y   + G+  +  L  A R 
Sbjct: 70  RNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRV 129

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  M  RG      TY  +++G      + EA  +F  M+  +  P    Y TM+ G   
Sbjct: 130 FVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCE 189

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             R ++A  + +E  S   +PN V Y AL+ G C+AG+M    KV   M      P   +
Sbjct: 190 AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            + +L+   CKSG +  A  +   M+   +      Y  LI+  C       A +LL  L
Sbjct: 250 -YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLL-HL 307

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIR 422
           +E   ++    T       ++ +I  LC   +  +A++F   L+KKGV ++ V + +LI 
Sbjct: 308 METNGLVPNDWT-------FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  K G  D+A E+++ M   G   DA +Y  LI+   R+ + + A   L+ M+E G   
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
           +   +  +++ L  +   +   ++   M+  G+  ++      + +    G +E+A   I
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             M+  G  PN   +++L+   +  G    A    +  +G+    +  SY  +L  ++  
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
             + N+  I +KI       D K    L+  + +      ADI S  IR
Sbjct: 541 SSSDNSVDI-WKI------ADMKDLQVLLEDITERQLPLAADIYSCFIR 582



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 212/468 (45%), Gaps = 20/468 (4%)

Query: 182 RFFEDMKS---RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           R F DM+S   R  + ++ TY T+IN Y     +  A++    +    + P   +YT+ +
Sbjct: 55  RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFV 114

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            GY        A R+F  M        A TYTALL GL  AG + E   V   M      
Sbjct: 115 LGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCA 174

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D  V+  ++   C++G    A  +L+  +          Y  LI+ +C A   + A+K
Sbjct: 175 P-DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VA 416
           + + +          +       +Y  +I  LC +G+  +A + F ++++ G L+P  V 
Sbjct: 234 VFEGM--------DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG-LEPNVVT 284

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYICLIESYLRKGEPADAKTALDSM 475
           +  LI+G   EG+   AF ++ +M   G VP D   +  LI++  ++ +  +A+  L S+
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW-TFSVLIDALCKREKVEEAQLFLGSL 343

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           ++ G      ++ S+++ L + G++  A  +M+ M+ +G   +    + +++ L  +  +
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403

Query: 536 EEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
            +A   ++ MM+ G   S   +  ++  L  +  +    K+ D  +      D+ +Y   
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVF 463

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           + +    G+  +A S++ +++++G   +  + + LI G    G   QA
Sbjct: 464 VRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 109/521 (20%), Positives = 222/521 (42%), Gaps = 58/521 (11%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +  + + L GA     A+  F  + RA     D   +  M+  L   G+   A  +L 
Sbjct: 143 FTYTALLHGLLGAGMVREAMTVFVGM-RADSCAPDTHVYATMVHGLCEAGRTEEAEVLLE 201

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +    G + +  ++  LI+ Y   G ++ ++K+F+ M       +V++Y  L   + + G
Sbjct: 202 EAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSG 261

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A   F++M+  G+EP   TY  ++ G      L+ A R    M++ G+  +  T++
Sbjct: 262 KVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFS 321

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+   + +K++EA+     + +K ++   + YT++I G     + D A  +  +M S 
Sbjct: 322 VLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE 381

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+A +Y++L+ GLC   K+ +   +L +M+E+              G+Q        
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK--------------GIQ-------- 419

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A+ V               Y I+I+   +    +   K+ DK++   I        + + 
Sbjct: 420 ASPVT--------------YTIIIDELVREVGSEGPKKIFDKMIATGI--------NPDI 457

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y   ++  C  G+   AE    Q++ +GV  + V +N LIRG++  G    AF   ++
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517

Query: 440 MGRRGVPRDADAYICLIESYLRK------------GEPADAKTALDSMIEDGHSPASSLF 487
           M  +G   + D+Y  L+   ++K             +  D +  L+ + E     A+ ++
Sbjct: 518 MVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIY 577

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
              +  L    R++ A      M    +  + D+   I++ 
Sbjct: 578 SCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDC 618



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 12/239 (5%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  ++  +I+ L R  KL+ A  +L DM +KG+Q     + ++I+   ++   +   
Sbjct: 383 FVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPK 442

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           KIFD M   G+   + +Y    +     GR   A+    +M+  G+ P   TYN ++ G+
Sbjct: 443 KIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMI----------NGYNRFK--KMDEAEKLF 219
                +  A   FE M  +G   +  +Y  ++          N  + +K   M + + L 
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLL 562

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
            ++ E+ +      Y+  I+    V+R ++A   F  M++ ++ P+   YT+++    D
Sbjct: 563 EDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCAD 621


>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 674

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 136/556 (24%), Positives = 241/556 (43%), Gaps = 47/556 (8%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVL-HGAKNSEHALQFFRWVERAGL-FNHDRET 58
           +AER W  R+ ++  A + Q     V   L H A      ++ + W  R G  F  DR  
Sbjct: 53  LAERDWFARINSEFAAPLRQLGPRFVVRALQHAAGEPLLCVRLYVWASRFGQHFARDRSV 112

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
              + + L R G +  +  ++ D+   G +  E++   L+ES+G+ G+   + ++F  + 
Sbjct: 113 RRALGDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVP 172

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           +LG+  S   Y+A+    +R G    A   F +M ++G  P   TYN ++ G      ++
Sbjct: 173 RLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVD 232

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+R  + M+  GI  +VVTY  +++G+    +++EA  +   MKEK +  T  +Y +++
Sbjct: 233 EALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLV 292

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G       + A R+  E    D   +++ Y  LL  L       E  ++ ++M +R   
Sbjct: 293 HGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGY- 351

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
                    LLG    S  +  A  VL++                  + C         +
Sbjct: 352 ---------LLGSTTFSIVIPCAVKVLES-----------------SDLC---------E 376

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AF 417
           L+D  ++K   L      DM    Y  +I+         KA  +F Q++  G+L  V ++
Sbjct: 377 LVDDFIKKGGNL----GFDM----YIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESY 428

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N +I   +K G  + A E +K+M   G   +   +  LI  YL+ G   DAK  L  ++E
Sbjct: 429 NIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVME 488

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G  P    F S+++ L    ++  A      M E GV+ N+     ++  L   GHV +
Sbjct: 489 HGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSK 548

Query: 538 ALGRIDLMMQSGSVPN 553
           A+  ++ M   G  P+
Sbjct: 549 AIELLNKMKMDGITPD 564



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 12/330 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K+G       F ++I    K     +  ++ D   + G       Y  + K  LR   
Sbjct: 346 MSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKD 405

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A +YF++M+S+G+  +  +YN+++  F  + ++E A+   + M+  G S ++VT+NT
Sbjct: 406 ISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNT 465

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +INGY +   + +A+     + E  + P VI++T++I G     + DDA   F EM  + 
Sbjct: 466 LINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWG 525

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V+PN  TY  L+ GLC AG + +  ++L +M    I P   S    +L   C+   +  A
Sbjct: 526 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSF-CRMRKIEKA 584

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ--STLDME 379
             +   M R  +  ++  Y  LI+  C     D A         KEIIL  +  S +  +
Sbjct: 585 QKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA---------KEIILAMESISCIGTK 635

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
             +Y P++  L   G+  +A +F  +L +K
Sbjct: 636 QHTYWPVVGALTKMGRFSEAGMFMNKLHRK 665



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 129/274 (47%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           + ++ +I+   R   ++ A      M   G+    + + ++I+ + K G V+ +++   +
Sbjct: 391 DMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKV 450

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M++ G   ++ +++ L    L+ G    AK +   ++  G+ P   T+  ++ G   + +
Sbjct: 451 MQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQ 510

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           L+ A   F +M   G+  +V TYN +I+G      + +A +L  +MK   I P   S+  
Sbjct: 511 LDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNA 570

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
            I  +  + + + A ++F++M  + V P++ TY AL+  LCD  ++ E ++++  M    
Sbjct: 571 PILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESIS 630

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
                   +  ++G   K G  + A   +  + R
Sbjct: 631 CIGTKQHTYWPVVGALTKMGRFSEAGMFMNKLHR 664



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 118/317 (37%), Gaps = 45/317 (14%)

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
           LRP + +      YN +I      G    A + F+Q+   G   D   +N L+ G  + G
Sbjct: 176 LRPSTAI------YNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRG 229

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             D A  +VK M R G+  +   Y  L++ +       +A   L+ M E G S   + +R
Sbjct: 230 IVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYR 289

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGV--------------------KENLDLVAKILEA 528
           S++   F     + A R++   +E                       KE ++L  K+ + 
Sbjct: 290 SLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKR 349

Query: 529 LLMRGHV---------------EEALGRIDLMMQSGSVPNFDSLLSVLSE--KGKTIA-A 570
             + G                  +    +D  ++ G    FD  + ++    + K I+ A
Sbjct: 350 GYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKA 409

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            K     +    +  + SY  V+D    AG+   A   +  + E G   +  + + LI G
Sbjct: 410 NKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLING 469

Query: 631 LNQEGNTKQADILSRMI 647
             + GN   A    +M+
Sbjct: 470 YLKLGNVHDAKAFLKMV 486


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 218/504 (43%), Gaps = 19/504 (3%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M   G+   V +   +   +    R   A     K+L  G +P   T+  ++ G  +  K
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +  A+  F+ M   G   +VVTY T+ING  +      A +L   M++ N +P V+ ++T
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I       +  +A  IF EM +  + PN VTY +L+ GLC   +   V  ++ EMV+  
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P D      ++   CK G +  A DV+  MI   +      Y  L++  C     D A
Sbjct: 276 IMP-DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
           +K+ D +V K+ +            SYN +I   C      KA   F + M +  L P  
Sbjct: 335 VKVFDTMVHKDCV--------ANVISYNTLINGYCKIQSVDKAMYLFEE-MSRQELTPNT 385

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +N LI G    G    A  +   M  RG   D   Y  L   YL K    D   AL  
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL-SDYLCKNRHLDKAMALLK 444

Query: 475 MIEDGH-SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            IE  +  P   ++ ++++ +   G ++ A  +  ++  KG++ N+     ++  L  +G
Sbjct: 445 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 504

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLS----EKGKTIAAVKLLDFCLGRDCIIDLASY 589
            + EA      M ++G  PN D   ++++       + +  ++LL+  L R   +D+++ 
Sbjct: 505 LLAEASKLFSEMNKNGCSPN-DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTT 563

Query: 590 EKVLDALLAAGKTLNAYSILFKIM 613
             ++  L   G   +   IL KI+
Sbjct: 564 TLLVGMLSDDGLDQSVKQILCKIV 587



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 217/522 (41%), Gaps = 32/522 (6%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   FN+ML +   P+   +N +L     +    T +     M S GI  DV T   +IN
Sbjct: 54  ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 113

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
                 ++D A    A++ +   +P   ++TT+I+G     +  +AL +FD+M     +P
Sbjct: 114 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQP 173

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N VTY  L+ GLC  G      ++LR M +    P +  VF  L+   CK   +  A ++
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP-NVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 325 LKAMIRLSIPTEAGHYGILIENFCK-----------AEMYDRAI--------KLLDKLVE 365
              MI   I      Y  LI   CK            EM D  I         ++D L +
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 292

Query: 366 KEIILRPQSTLDM--------EASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVA 416
           + ++      +DM           +YN ++   C   +   A ++F   + K  V + ++
Sbjct: 293 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N LI G+ K  + D A  + + M R+ +  +   Y  LI      G   DA +    M+
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P    +R++ + L ++  +  A  ++K++       ++ +   IL+ +   G +E
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           +A      +   G  PN   ++ ++  L ++G    A KL        C  +  +Y  + 
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
              L   + L    +L +++ +G   D  ++  L+  L+ +G
Sbjct: 533 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 215/516 (41%), Gaps = 51/516 (9%)

Query: 33  AKNSEHA--LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           AK   H+  L   R ++  G+   D  T   +I  L  + +++ A   L  + K G Q D
Sbjct: 81  AKTKHHSTLLSLSRQMDSFGI-PPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPD 139

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
              F  LI     +G + E++ +FD M   G + +V +Y  L   + + G    A R   
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 199

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
            M     +P    ++ ++       ++  A   F +M ++GIS ++VTYN++I+G  +  
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +      L  EM +  I P V +  T++          +A  + D M    V+PN VTY 
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYN 319

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           AL+ G C   ++    KV   MV                       H +  A+V+     
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMV-----------------------HKDCVANVIS---- 352

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
                    Y  LI  +CK +  D+A+ L +++  +E  L P +       +YN +I  L
Sbjct: 353 ---------YNTLINGYCKIQSVDKAMYLFEEMSRQE--LTPNTV------TYNTLIHGL 395

Query: 391 CHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           CH G+   A   F +++ +G + D V +  L     K  + D A  ++K +       D 
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  +++   R GE  DA+    ++   G  P    +  ++  L + G +  AS++   
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
           M + G   N D    ++    +R +  EAL  I+L+
Sbjct: 516 MNKNGCSPN-DCTYNLITRGFLRNN--EALRTIELL 548



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 97/454 (21%), Positives = 181/454 (39%), Gaps = 14/454 (3%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           ++NT  +    F  +DEA   F  M  K   P+ + +  ++      +     L +  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            SF + P+  T   ++  LC   ++      L ++++    P D + F  L+   C  G 
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQP-DATTFTTLIRGLCVEGK 155

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  +   MI          YG LI   CK      AI+LL  +         Q    
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM--------EQGNCQ 207

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
                ++ +I  LC + Q  +A   F +++ KG+  + V +N+LI G  K         +
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +  M    +  D      ++++  ++G  A+A   +D MI  G  P    + ++M+    
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
              V  A +V  +MV K    N+     ++        V++A+   + M +    PN   
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +++L+  L   G+   A+ L    + R  I DL +Y  + D L        A ++L  I 
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
                 D +    ++ G+ + G  + A D+ S +
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 143/573 (24%), Positives = 253/573 (44%), Gaps = 56/573 (9%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L  + DH LV  VL         +QFF+W  +   F HD  T++ +I  
Sbjct: 45  WGPDAEKALEVLKLKVDHRLVREVLKIDVEINVKIQFFKWAGKRRNFEHDLTTYMPLIRC 104

Query: 66  LGRVGKLNHARCILLDMPKKG--VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
           L   G       ++ +M +    V    D+ EV ++  GK  +V +++ +F  +K    +
Sbjct: 105 LDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEV-VKILGKAKMVNKALSVFYQIKSRKCK 163

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIR 182
            +  +Y+++  ++++ G +      +++M +EG   P   TY+V++  F    + + AIR
Sbjct: 164 PTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIR 223

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDE-AEKLFAEMKEKNIEPTVISYTTMIKG- 240
            F++MK+ G+      Y T++  Y  FK  DE A  L  EMK+K   PTV +YT +IKG 
Sbjct: 224 LFDEMKANGLHPTAKIYTTLLAIY--FKSGDEKALGLVQEMKDKGCAPTVFTYTELIKGL 281

Query: 241 ----------------------------------YVAVERADDALRIFDEMKSFDVKPNA 266
                                             +    R +DAL++FD+M+S    PN 
Sbjct: 282 GKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNV 341

Query: 267 VTYTALLPGLCDA-GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
           VTY  ++  L ++     E      +M    + P   +  + + G  CK+  +  A  +L
Sbjct: 342 VTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGF-CKTNRVEKALLLL 400

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
           + M     P     Y  LI    KA+ Y+ A +L  +L  KE   R  + +      Y  
Sbjct: 401 EEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLEL--KENCGRSSARI------YAV 452

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           MI++L   G+  +A   F ++ K G   D  A+N L+ G  + G  + AF  ++ M   G
Sbjct: 453 MIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENG 512

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
              D +++  ++    R G P  A      M +    P +  + +++ SL   G  + A+
Sbjct: 513 CTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAA 572

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           ++M+ M  +G + +    + ILEA+   G V+E
Sbjct: 573 KLMREMGSRGFEYDHITYSSILEAV---GKVDE 602



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 116/246 (47%), Gaps = 4/246 (1%)

Query: 5   AWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
           +W  ++  K   + P  F ++++ +        E AL     ++  G F      +  +I
Sbjct: 363 SWFEKM--KANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKG-FPPCPAAYCSLI 419

Query: 64  EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
             LG+  +   A  + L++ +   +    ++ V+I++ GK G   E+V +F+ MK++G  
Sbjct: 420 NALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCN 479

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
             V +Y+AL   ++R G    A      M   G  P  +++N++L G   + + E A   
Sbjct: 480 PDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEM 539

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  MK   I  D V+YNT++   +R    +EA KL  EM  +  E   I+Y+++++    
Sbjct: 540 FMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGK 599

Query: 244 VERADD 249
           V+  D+
Sbjct: 600 VDEDDE 605



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 109/478 (22%), Positives = 200/478 (41%), Gaps = 22/478 (4%)

Query: 173 LSLKLETAIRFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN---IE 228
           + +++   I+FF+   K R    D+ TY  +I   +      E  K+  EM       I 
Sbjct: 71  IDVEINVKIQFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIG 130

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P  +S    I G    +  + AL +F ++KS   KP A TY +++  L   G   ++ ++
Sbjct: 131 PADLSEVVKILG--KAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHEL 188

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             EM        D   +  L+    K G  + A  +   M    +   A  Y  L+  + 
Sbjct: 189 YHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYF 248

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K+   ++A+ L+ ++ +K     P         +Y  +I+ L  +G+   A   F  ++K
Sbjct: 249 KSG-DEKALGLVQEMKDKGCA--PT------VFTYTELIKGLGKSGRVEDAYSVFLNMLK 299

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA- 466
            G   D V  NNLI    K G  + A ++   M       +   Y  +I++      PA 
Sbjct: 300 DGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPAS 359

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A +  + M  +G +P+S  +  +++   +  RV+ A  +++ M EKG          ++
Sbjct: 360 EAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 419

Query: 527 EALLMRGHVEEALGRIDLMMQS----GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
            AL  +    EA   + L ++      S   +  ++  L + G+   AV L +      C
Sbjct: 420 NAL-GKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGC 478

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             D+ +Y  ++  L+ AG    A+S L  + E G   D  S + ++ GL + G  +QA
Sbjct: 479 NPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQA 536


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 250/563 (44%), Gaps = 69/563 (12%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           +A++ W+ +L+  ++   P    +L+ ++ +     +  L +F+W ++     H+ E   
Sbjct: 56  IAKQHWS-KLKTIVKETNPS---SLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFC 111

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF-----------------EVLIESYGK 103
           +++ +L      N  R +L    K     +  +F                 ++L+ +Y K
Sbjct: 112 RLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVK 171

Query: 104 KGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT 163
            G +  +++ FD     G   S  S + +   +++ GR  + +  + +M+   I     T
Sbjct: 172 NGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVT 231

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
           ++V++ G     K + A    EDMK+ G S  V+TYNT+I+GY +  KM +A+ L  EM 
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
            K I P  I++  +I G+   E    A ++F+EM+   ++PN VTY +L+ GLC  GK+ 
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E                        LG+Q K   +    +V+              Y  L
Sbjct: 352 EA-----------------------LGLQDKMSGMGLKPNVVT-------------YNAL 375

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I  FCK +M   A ++LD + ++   L P         ++N +I      G+   A +  
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRG--LAPN------VITFNTLIDAYGKAGRMDDAFLLR 427

Query: 404 RQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
             ++  GV   V+ +N LI G  +EGN   A ++ K M   G+  D   Y  L+++  +K
Sbjct: 428 SMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKK 487

Query: 463 GEPADAKTALDSMI---EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
           GE   A   LD M    + G       +  +++     G+++ A+R++  M+EKG+  N 
Sbjct: 488 GETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNR 547

Query: 520 DLVAKILEALLMRGHVEEALGRI 542
                + + ++ +G + +  G +
Sbjct: 548 TTYDILRDEMMEKGFIPDIDGHL 570



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 191/408 (46%), Gaps = 16/408 (3%)

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           ++++W +  + +++ A+  F+     G  L  ++ N M+    +  ++   E ++ EM  
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
           + I   V+++  +I G   V +   A  + ++MK++   P+ +TY  ++ G C AGKM +
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
              +L+EMV + I P +   F  L+   C+  ++ AA  V + M R  +      Y  LI
Sbjct: 283 ADALLKEMVAKRIHPNE-ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLI 341

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
              C     D A+ L DK+    + L+P         +YN +I   C      +A     
Sbjct: 342 NGLCSNGKLDEALGLQDKM--SGMGLKPN------VVTYNALINGFCKKKMLKEAREMLD 393

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            + K+G+  + + FN LI  + K G  D AF +  +M   GV  +   Y CLI  + R+G
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREG 453

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV---EKGVKENLD 520
              +A+     M  +G       +  ++++L + G  + A R++  M    +KG + N+ 
Sbjct: 454 NVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIV 513

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
               +++    +G +EEA   ++ M++ G +PN   +D L   + EKG
Sbjct: 514 TYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 178/420 (42%), Gaps = 54/420 (12%)

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++  YV     D AL  FD    +  + +A++   +L  L   G++  V+ V +EM+ R 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I   +   F  ++   CK G    A DV++ M           Y  +I+ +CKA    +A
Sbjct: 225 IGV-NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
             LL ++V K I   P         ++N +I   C +     A+  F ++ ++G L P  
Sbjct: 284 DALLKEMVAKRI--HPNEI------TFNILIDGFCRDENVTAAKKVFEEMQRQG-LQPNV 334

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +N+LI G    G  D A  +   M   G+  +   Y  LI  + +K    +A+  LD 
Sbjct: 335 VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD 394

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           + + G +P    F +++++  + GR+                          +A L+R  
Sbjct: 395 IGKRGLAPNVITFNTLIDAYGKAGRMD-------------------------DAFLLR-- 427

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
                    +M+ +G  PN   ++ L+     +G    A KL     G     DL +Y  
Sbjct: 428 --------SMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479

Query: 592 VLDALLAAGKTLNAYSIL--FKIMEKGG-VTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           ++DAL   G+T  A  +L    +MEK G   +  + + LI G   +G  ++A+ +L+ M+
Sbjct: 480 LVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 539



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 133/277 (48%), Gaps = 4/277 (1%)

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
           + A S NPM+  L   G+ G  E  +++++++ + ++ V F+ +I G  K G    A ++
Sbjct: 192 LSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV 251

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           V+ M   G       Y  +I+ Y + G+   A   L  M+     P    F  +++    
Sbjct: 252 VEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCR 311

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
           D  V  A +V + M  +G++ N+     ++  L   G ++EALG  D M   G  PN   
Sbjct: 312 DENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVT 371

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +++L++   +K     A ++LD    R    ++ ++  ++DA   AG+  +A+ +   ++
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           + G   +  + + LI G  +EGN K+A  L++ + G 
Sbjct: 432 DTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 232/486 (47%), Gaps = 13/486 (2%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G +N A  +  ++ + GV  +  +F VLIE   K G V+++ +++  MK +G++ +V   
Sbjct: 341 GDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFIL 400

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN-VMLWGFFLSLKLETAIRFFEDMK 188
           + L K   ++     A    +  +  GI     TYN V+LW   L  K+  A   ++ M 
Sbjct: 401 NFLLKGFRKQNLLENAYLLLDGAVENGIASVV-TYNIVLLWLCELG-KVNEACNLWDKMI 458

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +GI+  +V+YN MI G+ +   MD+A ++   + E  ++P  I+YT +++G       +
Sbjct: 459 GKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCE 518

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A  +FD+M +  + P   T+ +++ GLC  G++ E +  L   +++   P   + +  +
Sbjct: 519 HAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMT-YNCI 577

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +    K G +++A  V + M R  I      Y  LI  FCK+   D A+K+ D +  K  
Sbjct: 578 IDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRK-- 635

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
                  L+++ + Y  +I   C       A  FF +L++ G+  + + +N +I  +   
Sbjct: 636 ------GLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNL 689

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
            N ++A  + K M    +P D   Y  LI+  L++G+ + A      M+  G  P   ++
Sbjct: 690 NNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMY 749

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
             ++  L   G+++ A +++K M    +   + L   ++      G+++EA    D M+ 
Sbjct: 750 NVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLD 809

Query: 548 SGSVPN 553
            G VP+
Sbjct: 810 KGLVPD 815



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 155/643 (24%), Positives = 272/643 (42%), Gaps = 40/643 (6%)

Query: 3   ERAWTTRLQNKI---RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
           E+  T+    KI      +P     L   +LH A +   AL+FF+ VE  G F    +  
Sbjct: 40  EKMTTSDFPGKIPPEAPCIPSQKQVLDTLLLHKA-DPRSALRFFKQVETKGGFAKTADVL 98

Query: 60  LKMIEILGR----------------VGKLNHARCILLDM-----PKKGVQW-DEDMFEVL 97
             +++IL                   G    A  +L+++      + G +  D  +F  L
Sbjct: 99  CLLLQILASNPETHGDAKHLLNKYVFGDSAPAAKVLVELLVECAERYGFKLSDSRVFNYL 158

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           + SY +   + E+V+ F  M + GV   V   + L   ++RR     A R F++M    I
Sbjct: 159 LISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRI 218

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
               +T  V++       K   A R+F     RG+ LD  +Y+ +I    R   +D A K
Sbjct: 219 YGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASK 278

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           L    +E    P+  +Y  +I   V +    +ALR+ DEM    V  N    T+L+ G C
Sbjct: 279 LVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYC 338

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             G +    ++  E+VE  + P + ++F  L+    K G++  A ++   M  + +    
Sbjct: 339 VRGDVNSALRLFDEVVEVGVTP-NVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTV 397

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
                L++ F K  + + A  LLD  VE  I             +YN ++  LC  G+  
Sbjct: 398 FILNFLLKGFRKQNLLENAYLLLDGAVENGI---------ASVVTYNIVLLWLCELGKVN 448

Query: 398 KAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A   + +++ KG+    V++N++I GH K+G  D A E++  +   G+  +A  Y  L+
Sbjct: 449 EACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILM 508

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           E   +KG+   A    D M+  G  P    F S++  L + GRV  A   + + +++   
Sbjct: 509 EGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFI 568

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
                   I++  +  G ++ A      M +S   PN   + SL++   +  K   A+K+
Sbjct: 569 PTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKM 628

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
            D    +   +D+  Y  ++          NA     K++E G
Sbjct: 629 HDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVG 671



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 189/397 (47%), Gaps = 12/397 (3%)

Query: 66  LGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           L  +GK+N A C L D M  KG+      +  +I  + KKG + ++ ++ + + + G++ 
Sbjct: 441 LCELGKVNEA-CNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKP 499

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           +  +Y  L +   ++G    A   F++M++ GI PT +T+N ++ G     ++  A    
Sbjct: 500 NAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKL 559

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
                +      +TYN +I+GY +   +D AE ++ EM    I P VI+YT++I G+   
Sbjct: 560 NTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKS 619

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            + D AL++ D+MK   ++ +   Y  L+ G C    M    K   +++E  + P +  V
Sbjct: 620 NKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTP-NTIV 678

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  ++       ++ AA ++ K MI   IP +   Y  LI+   K      A+ L  +++
Sbjct: 679 YNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEML 738

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRG 423
            + I+  P   +      YN +I  LC++GQ   A    +++    +   V  +N LI G
Sbjct: 739 CRGIV--PDIFM------YNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAG 790

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
           H KEGN   AF +   M  +G+  D   Y  L+   L
Sbjct: 791 HFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 827



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 101/218 (46%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I    +  K++ A  +  DM +KG++ D  ++  LI  + K   ++ + K F  +
Sbjct: 608 TYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKL 667

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            ++G+  +   Y+ +            A     +M++  I      Y  ++ G     KL
Sbjct: 668 LEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKL 727

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+  + +M  RGI  D+  YN +ING     +++ A K+  EM   NI PTV+ Y T+
Sbjct: 728 SFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTL 787

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           I G+       +A R+ DEM    + P+  TY  L+ G
Sbjct: 788 IAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 5/152 (3%)

Query: 23  HNLVYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           + +VYN++  A     N E AL   + +    +   D + +  +I+ L + GKL+ A  +
Sbjct: 675 NTIVYNIMISAYRNLNNMEAALNLHKEMINNKI-PCDLKIYTSLIDGLLKEGKLSFALDL 733

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
             +M  +G+  D  M+ VLI      G ++ + KI   M    +  +V  Y+ L     +
Sbjct: 734 YSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFK 793

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
            G    A R  ++ML +G+ P   TY++++ G
Sbjct: 794 EGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/581 (22%), Positives = 256/581 (44%), Gaps = 33/581 (5%)

Query: 16  ALVPQFDHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           +L+  FD  ++  VL      +   L+FF ++ +      D   HL +   L R  K   
Sbjct: 23  SLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAE 82

Query: 75  ARCILLDMPKKGVQWD-------------------EDMFEVLIESYGKKGIVQESVKIFD 115
            + +L  +   G  W                    E   ++L   Y    +   S+++FD
Sbjct: 83  MKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFD 142

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
             ++ G E   +S       + R G   +   +  +M+  GIE    ++  ++ G     
Sbjct: 143 YARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKG 202

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           ++  A    +++  +G    V+TYNT++NGY   K +    ++ + M++  ++  V +YT
Sbjct: 203 EVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYT 262

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I+ Y    + ++A ++FDEM    ++P+   YT+++   C  G M     +  EM ER
Sbjct: 263 MLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER 322

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            + P +   +  L+   CK+G + AA  ++  M    +      +  L++ +CK  M D 
Sbjct: 323 RLVP-NAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDE 381

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A++L +        +  Q   +++A + N +    C + +  +A+     + ++GV  + 
Sbjct: 382 ALRLQN--------IMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 433

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V+F+ LI  + KE N   A  + K+M ++G       Y   IE Y +KG+  +A   ++ 
Sbjct: 434 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 493

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M E G  P +  + S+++     G V  A  +   M + G+  N+     I+  L   G 
Sbjct: 494 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 553

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
            +EA    D M + G VP+   + SL++ L + G  ++ ++
Sbjct: 554 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 594



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 157/372 (42%), Gaps = 34/372 (9%)

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           + S F  LL ++ +SG++    + L+ M+   I      +  +++  CK     RA  L+
Sbjct: 153 ERSCFEFLLALK-RSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALM 211

Query: 361 DKLVEK--------------------------EII-LRPQSTLDMEASSYNPMIQHLCHN 393
           D+LV K                          EI+ L  ++ +D   ++Y  +I+    +
Sbjct: 212 DELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRS 271

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +AE  F +++KKG+  D   + ++I  + K GN   AF +   M  R +  +A  Y
Sbjct: 272 SKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTY 331

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI    + GE   A+  ++ M   G      +F ++M+   + G +  A R+   M +
Sbjct: 332 GALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQ 391

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS-GSVPN---FDSLLSVLSEKGKTI 568
           KG + +      I+ +   R +  E   R+ L M+  G  PN   F  L+ +  ++    
Sbjct: 392 KGFEIDA-FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFA 450

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A +L      +     + +Y   ++     GK   AY ++ ++ E+G + D  +   LI
Sbjct: 451 EARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 510

Query: 629 AGLNQEGNTKQA 640
            G    GN  +A
Sbjct: 511 DGERASGNVDRA 522


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 204/417 (48%), Gaps = 10/417 (2%)

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           ++++ +K  Q D   +  LI  + K   + ++ ++ D M+         +Y+ +   +  
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           RG+  +A +  N++LS+  +PT  TY +++    L   ++ A++  ++M SRG+  D+ T
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YNT+I G  +   +D A ++   ++ K  EP VISY  +++  +   + ++  ++  +M 
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           S    PN VTY+ L+  LC  GK+ E   +L+ M E+ + P D   +  L+   C+ G L
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP-DAYSYDPLIAAFCREGRL 384

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A + L+ MI      +  +Y  ++   CK    D+A+++  KL   E+   P S    
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL--GEVGCSPNS---- 438

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
             SSYN M   L  +G   +A     ++M  G+  D + +N++I    +EG  D AFE++
Sbjct: 439 --SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
             M           Y  ++  + +     DA   L+SM+ +G  P  + +  ++E +
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 117/486 (24%), Positives = 217/486 (44%), Gaps = 12/486 (2%)

Query: 56  RETH-LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           R+T  LK+     R G    +  +L  M +KG   D  +   LI+ +     + ++V++ 
Sbjct: 88  RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM 147

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           +I+++ G +  V +Y+AL     +  R   A R  ++M S+   P   TYN+M+      
Sbjct: 148 EILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL+ A++    + S      V+TY  +I        +DEA KL  EM  + ++P + +Y
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I+G       D A  +   ++    +P+ ++Y  LL  L + GK  E +K++ +M  
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P +   +  L+   C+ G +  A ++LK M    +  +A  Y  LI  FC+    D
Sbjct: 327 EKCDP-NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            AI+ L+ ++    +         +  +YN ++  LC NG+  +A   F +L + G   +
Sbjct: 386 VAIEFLETMISDGCL--------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
             ++N +       G+   A  ++  M   G+  D   Y  +I    R+G   +A   L 
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M      P+   +  V+    +  R++ A  V++SMV  G + N      ++E +   G
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557

Query: 534 HVEEAL 539
           +  EA+
Sbjct: 558 YRAEAM 563



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 192/430 (44%), Gaps = 47/430 (10%)

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           E+  L   M  K   P VI  T +IKG+  +     A+R+ + ++ F  +P+   Y AL+
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C   ++ +  +VL  M  +   P D   +  ++G  C  G L+ A  VL  ++  + 
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSP-DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y ILIE        D A+KL+D+++ +   L+P                     
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRG--LKP--------------------- 261

Query: 394 GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
                              D   +N +IRG  KEG  D AFE+V+ +  +G   D  +Y 
Sbjct: 262 -------------------DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYN 302

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            L+ + L +G+  + +  +  M  +   P    +  ++ +L  DG+++ A  ++K M EK
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAA 570
           G+  +      ++ A    G ++ A+  ++ M+  G +P   N++++L+ L + GK   A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           +++        C  + +SY  +  AL ++G  + A  ++ ++M  G   D  + + +I+ 
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482

Query: 631 LNQEGNTKQA 640
           L +EG   +A
Sbjct: 483 LCREGMVDEA 492



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 193/419 (46%), Gaps = 15/419 (3%)

Query: 8   TRLQNKIRALVPQFDHNLV-YNVLHGAKNSEHALQFFRWVERAGLFNHDRET---HLKMI 63
           TR+ +++R+    F  + V YN++ G+  S   L     V    L ++ + T   +  +I
Sbjct: 178 TRVLDRMRS--KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235

Query: 64  EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
           E     G ++ A  ++ +M  +G++ D   +  +I    K+G+V  + ++   ++  G E
Sbjct: 236 EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSE 295

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
             V SY+ L + +L +G++   ++   KM SE  +P   TY++++       K+E A+  
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
            + MK +G++ D  +Y+ +I  + R  ++D A +    M      P +++Y T++     
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
             +AD AL IF ++      PN+ +Y  +   L  +G  +    ++ EM+   I P D  
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP-DEI 474

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  ++   C+ G ++ A ++L  M           Y I++  FCKA   + AI +L+ +
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIR 422
           V      RP  T      +Y  +I+ +   G   +A      L++   +   +F  L R
Sbjct: 535 VGNGC--RPNET------TYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHR 585


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 229/493 (46%), Gaps = 41/493 (8%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   ++  L R G++  A  +L  M + G+Q ++  +  +++   K G    ++ +   M
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 243

Query: 118 KQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           +++  +  +V  Y+ +   + + GR+  A   F +M  + I P   TYN M+ GF +S +
Sbjct: 244 EEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGR 303

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A +  ++M  R I+ DVVT++ +IN + +  K  EAE+L+ EM  ++I P+ ++Y++
Sbjct: 304 WSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSS 363

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           MI G+    R D A  +F    +    P+ +T+  L+ G C A ++ +  K+L EM E  
Sbjct: 364 MIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 423

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +   +   +  L+   C+ G LNAA D+L+ MI   +         L++  C       A
Sbjct: 424 LV-ANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDA 482

Query: 357 IKLLDKLVEKEIIL---RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           +++   + + ++ +   RP + ++ +  +YN +I  L + G+  +AE  + ++  +G++ 
Sbjct: 483 LEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542

Query: 413 -----------------------------------DPVAFNNLIRGHSKEGNPDSAFEIV 437
                                              D V FN LI G+ K G  D   E+ 
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELF 602

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             MG+RG+  DA  YI LI  + +      A      MI  G  P +   R+++  L+  
Sbjct: 603 CEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSK 662

Query: 498 GRVQTASRVMKSM 510
             ++ A  +++ +
Sbjct: 663 EELERAVAMLEDL 675



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 219/509 (43%), Gaps = 45/509 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+     +  + E++ +F  M     + +V ++  L   + R GR + A    ++ML
Sbjct: 154 FNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRML 209

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG-ISLDVVTYNTMINGYNRFKKM 212
            +G++P + TY  ++ G        +A+     M+    I  +VV YNT+I+G  +  + 
Sbjct: 210 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRH 269

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            +A  LF EM+EK I P +++Y  MI G+    R  DA ++  EM    + P+ VT++AL
Sbjct: 270 SDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSAL 329

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +      GK  E +++  EM+ R I P     +  ++   CK   L+AA  +        
Sbjct: 330 INAFVKEGKFFEAEELYDEMLPRSIIPS-TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKG 388

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP--QSTL--------DMEAS- 381
              +   +  LI  +C+A+  D  IKLL ++ E  ++      +TL        D+ A+ 
Sbjct: 389 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQ 448

Query: 382 ----------------SYNPMIQHLCHNGQTGKAEIFFRQLMK-----------KGV-LD 413
                           + N ++  LC NG+   A   F+ + K            GV  D
Sbjct: 449 DLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPD 508

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              +N LI G   EG    A E+ + M  RG+  D   Y  +I+   ++    +A    D
Sbjct: 509 VQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 568

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           SM     SP    F +++    + G V     +   M ++G+  +      ++       
Sbjct: 569 SMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVD 628

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
           +++ AL     M+ SG  P+  ++ ++L+
Sbjct: 629 NIDGALDIFQEMISSGVYPDTITIRNMLT 657



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 129/592 (21%), Positives = 249/592 (42%), Gaps = 63/592 (10%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++ +F  M +     SV  +  L  +++R GR  +      KM    +    +++ +
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    KL  A+  F  +   G    VVT+NT+++G     ++ EA  LF +M    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P V+++TT++ G     R  +A+ + D M    ++PN +TY  ++ G+C  G  V   
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 287 KVLREMVE-----------------------------RYIPPKDNSVFMKLLGVQCK--- 314
            +LR+M E                              +I  ++  +F  ++   C    
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 315 ---SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
              SG  + A  +L+ M+   I  +   +  LI  F K   +  A +L D+++ + II  
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSII-- 355

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNP 430
           P +       +Y+ MI   C   +   AE  F     KG   D + FN LI G+ +    
Sbjct: 356 PSTV------TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRV 409

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D   +++  M   G+  +   Y  LI  + + G+   A+  L  MI  G  P      ++
Sbjct: 410 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTL 469

Query: 491 MESLFEDGRVQTASRVMKSMVE-----------KGVKENLDLVAKILEALLMRGHVEEAL 539
           ++ L ++G+++ A  + K+M +            GV+ ++     ++  L+  G   EA 
Sbjct: 470 LDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAE 529

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
              + M   G VP+   + S++  L ++ +   A ++ D    +    D+ ++  ++   
Sbjct: 530 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGY 589

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
             AG   +   +  ++ ++G V D  +   LI G  +  N   A DI   MI
Sbjct: 590 CKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMI 641



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 133/255 (52%), Gaps = 12/255 (4%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           AK  +  ++    +  AGL   +  T+  +I    +VG LN A+ +L +M   GV  +  
Sbjct: 406 AKRVDDGIKLLHEMTEAGLV-ANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVV 464

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQL-----------GVERSVKSYDALFKLILRRGR 141
               L++     G +++++++F  M++            GVE  V++Y+ L   ++  G+
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGK 524

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           ++ A+  + +M   GI P   TY+ M+ G     +L+ A + F+ M S+  S DVVT+NT
Sbjct: 525 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNT 584

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I GY +   +D+  +LF EM ++ I    I+Y T+I G+  V+  D AL IF EM S  
Sbjct: 585 LITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSG 644

Query: 262 VKPNAVTYTALLPGL 276
           V P+ +T   +L GL
Sbjct: 645 VYPDTITIRNMLTGL 659



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 112/492 (22%), Positives = 209/492 (42%), Gaps = 33/492 (6%)

Query: 170 GFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
           GF     L+ AI  F  M +SR +   V+ +  ++    R  + D    L  +M+   + 
Sbjct: 55  GFHEIKGLDDAIDLFGYMVRSRPLP-SVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
               S+T ++K + +  +   AL  F ++      P  VT+  LL GLC   ++ E   +
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL 173

Query: 289 LREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
             +M       K N V F  L+   C+ G +  A  +L  M+   +      YG +++  
Sbjct: 174 FHQMC------KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           CK      A+ LL K+ E   I+ P   +      YN +I  L  +G+   A   F ++ 
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHII-PNVVI------YNTIIDGLWKDGRHSDAHNLFIEMQ 280

Query: 408 KKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
           +K +  D V +N +I G    G    A ++++ M  R +  D   +  LI +++++G+  
Sbjct: 281 EKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFF 340

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A+   D M+     P++  + S+++   +  R+  A  +      KG   ++     ++
Sbjct: 341 EAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLI 400

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
                   V++ +  +  M ++G V N   + +L+    + G   AA  LL   +     
Sbjct: 401 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVC 460

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEK------------GGVTDWKSSDKLIAGL 631
            ++ +   +LD L   GK  +A   +FK M+K            G   D ++ + LI GL
Sbjct: 461 PNVVTCNTLLDGLCDNGKLKDALE-MFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGL 519

Query: 632 NQEGNTKQADIL 643
             EG   +A+ L
Sbjct: 520 INEGKFLEAEEL 531



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 87/176 (49%)

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           P  GV+ D   + +LI     +G   E+ ++++ M   G+     +Y ++   + ++ R 
Sbjct: 501 PFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A + F+ M S+   P   T+N ++ G+  +  ++  +  F +M  RGI  D +TY T+
Sbjct: 561 DEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITL 620

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           I G+ +   +D A  +F EM    + P  I+   M+ G  + E  + A+ + ++++
Sbjct: 621 IYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 89/195 (45%), Gaps = 10/195 (5%)

Query: 39  ALQFFRWVERAGL-------FN---HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
           AL+ F+ ++++ +       FN    D +T+  +I  L   GK   A  +  +MP +G+ 
Sbjct: 482 ALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            D   +  +I+   K+  + E+ ++FD M        V +++ L     + G        
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLEL 601

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F +M   GI     TY  +++GF     ++ A+  F++M S G+  D +T   M+ G   
Sbjct: 602 FCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWS 661

Query: 209 FKKMDEAEKLFAEMK 223
            ++++ A  +  +++
Sbjct: 662 KEELERAVAMLEDLQ 676


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 147/645 (22%), Positives = 271/645 (42%), Gaps = 20/645 (3%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W   ++  +          ++  V+   K+   A Q+FRWVER     H  E +   + +
Sbjct: 83  WGPDVEEALNVFDEMSQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMV 142

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           + R   L++   IL +M   G      +   L+ S+ K   ++E+  + ++M++     +
Sbjct: 143 MARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPA 202

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y  L   +    R       F++M   G E   H +  ++  F    +++ A+   +
Sbjct: 203 FSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLD 262

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +MKS   + D+V YN  I+ + +  K+D A K F EMK + + P  ++YTT+I       
Sbjct: 263 EMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKAR 322

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNS 303
           R D+A+ +F+E+      P    Y  ++ G   AGK  E   +L     +   P     +
Sbjct: 323 RLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYN 382

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
             +  LG   + G +  A  +   M + + P     Y ILI+  CKA   + A+K+ D +
Sbjct: 383 CILTCLG---RKGKVEEALRIHDEMRQDAAPN-LTTYNILIDMLCKAGELEAALKVQDTM 438

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIR 422
             KE  L P         + N MI  LC   +  +A  IF     K    D   F +LI 
Sbjct: 439 --KEAGLFPN------IMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLID 490

Query: 423 GHSKEGNPDSAFEIV-KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
           G  + G  D A+ +  K++    +P +   Y  LI+++ + G   D       M+  G S
Sbjct: 491 GLGRRGRVDDAYSLYEKMLDSDQIP-NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCS 549

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P   L  S M+ +F+ G V+    + + +  +G+  ++   + ++  L+  G   E    
Sbjct: 550 PDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKL 609

Query: 542 IDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
              M + G    V  +++++    + GK   A +LL+    +     + +Y  V+D L  
Sbjct: 610 FYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
             +   AY +  +    G   +      LI G  + G   +A ++
Sbjct: 670 IDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLI 714



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 148/663 (22%), Positives = 294/663 (44%), Gaps = 58/663 (8%)

Query: 5   AWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFF------RWVERAGLFNHDRE 57
           AW    + K + LVP    +  +  VL  A+  + A++ F      R V     +N    
Sbjct: 292 AWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYN---- 347

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
               MI   G  GK + A  +L    +KG       +  ++   G+KG V+E+++I D M
Sbjct: 348 ---TMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM 404

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +Q     ++ +Y+ L  ++ + G    A +  + M   G+ P   T N+M+     + KL
Sbjct: 405 RQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKL 463

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A   F  +  +  S D  T+ ++I+G  R  ++D+A  L+ +M + +  P V+ YT++
Sbjct: 464 DEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSL 523

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I+ +    R +D  +I+ EM      P+ +   + +  +  AG++ + + +  E+  + +
Sbjct: 524 IQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGL 583

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P   S  + + G+  K+G       +   M    +  +   Y  +I+ FCK+   D+A 
Sbjct: 584 VPDVRSYSILIHGL-VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAY 642

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           +LL+++  K   L+P         +Y  ++  L    +  +A + F +    GV L+ V 
Sbjct: 643 QLLEEMKTKG--LQPTVV------TYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVI 694

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +++LI G  K G  D A+ I++ + ++G+  ++  + CL+++ ++  E  +A+    +M 
Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
               SP +  +  ++  L    +   A    + M ++G+K N      ++  L   G+V 
Sbjct: 755 NLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVM 814

Query: 537 EALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
           EA G  D    SG VP                                D A Y  +++ L
Sbjct: 815 EARGLFDRFKASGGVP--------------------------------DSACYNAMIEGL 842

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQ 656
            +A K ++AY +  +   KG   + K+   L+  L++    +QA I+  ++R EM++   
Sbjct: 843 SSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLR-EMAKSQH 901

Query: 657 KEK 659
             +
Sbjct: 902 ATR 904



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 137/637 (21%), Positives = 264/637 (41%), Gaps = 46/637 (7%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+  +        + A +FF  ++  GL   D  T+  +I +L +  +L+ A  +  ++
Sbjct: 276 YNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDV-TYTTLIGVLCKARRLDEAVELFEEL 334

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
                      +  +I  YG  G   E+  + +  K+ G   SV +Y+ +   + R+G+ 
Sbjct: 335 DLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKV 394

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A R  ++M  +   P   TYN+++     + +LE A++  + MK  G+  +++T N M
Sbjct: 395 EEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIM 453

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+   + +K+DEA  +F  +  K   P   ++ ++I G     R DDA  ++++M   D 
Sbjct: 454 IDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQ 513

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN V YT+L+      G+  +  K+ +EMV R   P D  +    +    K+G +    
Sbjct: 514 IPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP-DLMLLNSYMDCVFKAGEVEKGR 572

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            + + +    +  +   Y ILI    KA       KL  ++ E+         L ++  +
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQ--------GLHLDVLA 624

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIM 440
           YN +I   C +G+  KA     ++  KG L P  V + +++ G +K    D A+ + +  
Sbjct: 625 YNTVIDGFCKSGKVDKAYQLLEEMKTKG-LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 683

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              GV  +   Y  LI+ + + G   +A   L+ +++ G +P S  +  ++++L +   +
Sbjct: 684 KSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEI 743

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
             A    ++M       N    + ++  L M     +A      M + G  PN       
Sbjct: 744 DEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNN------ 797

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
                                      +Y  ++  L  AG  + A  +  +    GGV D
Sbjct: 798 --------------------------ITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPD 831

Query: 621 WKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
               + +I GL+       A I+    R +  R + K
Sbjct: 832 SACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSK 868


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 231/501 (46%), Gaps = 33/501 (6%)

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           KL  A  + +DM  +G+  D  ++  LI +Y K G + ++V + + M   G++ +     
Sbjct: 312 KLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVS 371

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
           ++ + +   G        F +    GI      YN+++       K+E A+    +MK R
Sbjct: 372 SILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGR 431

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
            +SLDVV Y T+I GY    K+ +A+ +F EMKE+ IEP +++Y  ++ G+       +A
Sbjct: 432 RMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEA 491

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           L + D + +  +KPN+ T+  ++ GLC AGK+ E +  L  + ++ +       +  ++ 
Sbjct: 492 LELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN-----YSAMVD 546

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             CK+     A ++   + +  I  +      L+ + C    YD+A+ LL++++      
Sbjct: 547 GYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERML------ 600

Query: 371 RPQSTLDMEASS--YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
                LD+E +   Y  +I   C +G   +A++ F  L+++G+  D + +  +I G+ + 
Sbjct: 601 ----ALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRV 656

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESY------------LRKG---EPADAKTAL 472
                A +I   M  RG+  D   Y  +++ +              KG   E  DA    
Sbjct: 657 NCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFW 716

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M E G  P    +  +++S  +   +Q A  +   M+ +G++ ++     +L +   R
Sbjct: 717 SEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSR 776

Query: 533 GHVEEALGRIDLMMQSGSVPN 553
           G ++ A+  ++ M   G  P+
Sbjct: 777 GDMDRAITLVNEMSFKGIEPD 797



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 122/572 (21%), Positives = 253/572 (44%), Gaps = 26/572 (4%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           + ++L+++Y + G+  E++      K+ G    + S + L   ++  G+  MA   +  +
Sbjct: 159 VLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHL 218

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
              G+ P  +TY + +         E A+  F +M+  G++ + VT +T I G    K+ 
Sbjct: 219 KRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRS 278

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D   +    ++  N      +YT +I+G+ +  +  +A  +F +M +  + P+   Y AL
Sbjct: 279 DLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGAL 338

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM-KLLGVQCKSGHLNAAADVLKAMIRL 331
           +   C AG +++   +  +MV   I  K N V +  +L   C+ G  +   D  K     
Sbjct: 339 IHAYCKAGNLLQAVALHNDMVSNGI--KTNCVIVSSILQCLCEMGMASEVVDQFKEFRDS 396

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            I  +   Y I+++  CK    + A++LL+++  +         + ++   Y  +I   C
Sbjct: 397 GIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRR--------MSLDVVHYTTLIAGYC 448

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G+   A+  F ++ ++G+  D V +N L+ G S+ G    A E++  +G +G+  ++ 
Sbjct: 449 LQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSA 508

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +  +IE     G+  +A+  L+++ +      S++     ++ F     +  SR+ K  
Sbjct: 509 THNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSK-- 566

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
             +G+        K+L +L M G  ++AL  ++ M+     PN   +  L+      G  
Sbjct: 567 --QGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDM 624

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A  + D  + R    D+ +Y  +++          A  I   + E+G   D  +   +
Sbjct: 625 KRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVV 684

Query: 628 IAGLNQEGNTKQADILSRMIRGEMSRGSQKEK 659
           + G + + N K A  L      + S+GS++EK
Sbjct: 685 LDG-HSKVNLKMARSL------QFSKGSEEEK 709



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 144/329 (43%), Gaps = 59/329 (17%)

Query: 25  LVYNVLHG--AKNS--EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN+L G  ++N   + AL+    +   GL   +  TH ++IE L   GK+  A   L 
Sbjct: 473 VTYNILVGGFSRNGLKKEALELLDCIGTQGL-KPNSATHNRIIEGLCMAGKVKEAEAFLN 531

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS------------ 128
            +  K ++     +  +++ Y K    +++ ++F  + + G+    KS            
Sbjct: 532 TLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEG 587

Query: 129 -----------------------YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
                                  Y  L     R G    A+  F+ ++  GI P   TY 
Sbjct: 588 EYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYT 647

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR----------FKKMDEA 215
           +M+ G+     L  A   F DMK RGI  DV+TY  +++G+++          F K  E 
Sbjct: 648 MMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEE 707

Query: 216 EKL-----FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           EK+     ++EMKE  I+P V+ YT +I  +       DA+ ++DEM +  ++P+ VTYT
Sbjct: 708 EKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYT 767

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           ALL   C  G M     ++ EM  + I P
Sbjct: 768 ALLSSCCSRGDMDRAITLVNEMSFKGIEP 796



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 128/265 (48%), Gaps = 16/265 (6%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           A  +  A + F  + + G+    +++  K++  L   G+ + A  +L  M    V+ ++ 
Sbjct: 551 ANFTRKAYELFSRLSKQGILVK-KKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQI 609

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           M+  LI ++ + G ++ +  +FD++ + G+   V +Y  +     R      A+  FN M
Sbjct: 610 MYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDM 669

Query: 153 LSEGIEPTRHTYNVMLWGFF-LSLKLETAIRF--------------FEDMKSRGISLDVV 197
              GI+P   TY V+L G   ++LK+  +++F              + +MK  GI  DVV
Sbjct: 670 KERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVV 729

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            Y  +I+ + +   + +A  L+ EM  + ++P +++YT ++    +    D A+ + +EM
Sbjct: 730 CYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEM 789

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKM 282
               ++P++   + L  G+  A K+
Sbjct: 790 SFKGIEPDSRAMSVLHRGILKARKV 814



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 94/443 (21%), Positives = 178/443 (40%), Gaps = 30/443 (6%)

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
           YN   + + A   F ++KE   +  V +Y  +I+             +  E+        
Sbjct: 71  YNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVL 130

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS----GHLNAA 321
               TAL               VLRE     +  + +SV + +L +  K+    G  + A
Sbjct: 131 GFDITALF-------------DVLREGGGE-VEGEHSSVLILVLDMLVKAYVRVGMFDEA 176

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            D L    R            L+    +    D A+ +   L  K + L P         
Sbjct: 177 IDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHL--KRLGLNPNDY------ 228

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y   I+ LC  G   +A   FR++ + GV  + V  +  I G       D  +E ++ +
Sbjct: 229 TYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRAL 288

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
                P D  AY  +I  +  + +  +A+     M+ +G +P   ++ +++ +  + G +
Sbjct: 289 RAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNL 348

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A  +   MV  G+K N  +V+ IL+ L   G   E + +      SG   +   ++ +
Sbjct: 349 LQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIV 408

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  L + GK   AV+LL+   GR   +D+  Y  ++      GK ++A ++  ++ E+G 
Sbjct: 409 VDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGI 468

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA 640
             D  + + L+ G ++ G  K+A
Sbjct: 469 EPDIVTYNILVGGFSRNGLKKEA 491



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 51/98 (52%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M + G++ D   + VLI+S+ K   +Q+++ ++D M   G++  + +Y AL      RG
Sbjct: 718 EMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRG 777

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
               A    N+M  +GIEP     +V+  G   + K++
Sbjct: 778 DMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/581 (22%), Positives = 256/581 (44%), Gaps = 33/581 (5%)

Query: 16  ALVPQFDHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           +L+  FD  ++  VL      +   L+FF ++ +      D   HL +   L R  K   
Sbjct: 27  SLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAE 86

Query: 75  ARCILLDMPKKGVQWD-------------------EDMFEVLIESYGKKGIVQESVKIFD 115
            + +L  +   G  W                    E   ++L   Y    +   S+++FD
Sbjct: 87  MKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFD 146

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
             ++ G E   +S       + R G   +   +  +M+  GIE    ++  ++ G     
Sbjct: 147 YARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKG 206

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           ++  A    +++  +G    V+TYNT++NGY   K +    ++ + M++  ++  V +YT
Sbjct: 207 EVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYT 266

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I+ Y    + ++A ++FDEM    ++P+   YT+++   C  G M     +  EM ER
Sbjct: 267 MLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER 326

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            + P +   +  L+   CK+G + AA  ++  M    +      +  L++ +CK  M D 
Sbjct: 327 RLVP-NAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDE 385

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A++L +        +  Q   +++A + N +    C + +  +A+     + ++GV  + 
Sbjct: 386 ALRLQN--------IMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 437

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V+F+ LI  + KE N   A  + K+M ++G       Y   IE Y +KG+  +A   ++ 
Sbjct: 438 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 497

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M E G  P +  + S+++     G V  A  +   M + G+  N+     I+  L   G 
Sbjct: 498 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 557

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
            +EA    D M + G VP+   + SL++ L + G  ++ ++
Sbjct: 558 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 598



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 157/372 (42%), Gaps = 34/372 (9%)

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           + S F  LL ++ +SG++    + L+ M+   I      +  +++  CK     RA  L+
Sbjct: 157 ERSCFEFLLALK-RSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALM 215

Query: 361 DKLVEK--------------------------EII-LRPQSTLDMEASSYNPMIQHLCHN 393
           D+LV K                          EI+ L  ++ +D   ++Y  +I+    +
Sbjct: 216 DELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRS 275

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +AE  F +++KKG+  D   + ++I  + K GN   AF +   M  R +  +A  Y
Sbjct: 276 SKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTY 335

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI    + GE   A+  ++ M   G      +F ++M+   + G +  A R+   M +
Sbjct: 336 GALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQ 395

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS-GSVPN---FDSLLSVLSEKGKTI 568
           KG + +      I+ +   R +  E   R+ L M+  G  PN   F  L+ +  ++    
Sbjct: 396 KGFEIDA-FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFA 454

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A +L      +     + +Y   ++     GK   AY ++ ++ E+G + D  +   LI
Sbjct: 455 EARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 514

Query: 629 AGLNQEGNTKQA 640
            G    GN  +A
Sbjct: 515 DGERASGNVDRA 526


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 208/441 (47%), Gaps = 15/441 (3%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G++  A  ++  M  KG+  D   +  ++    K G  + ++ +   M++  ++  V  Y
Sbjct: 24  GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 83

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            A+   + + G +  A+  F++ML +GI P   TYN M+ GF    +   A R   DM  
Sbjct: 84  SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 143

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           R I+ DV+T+N +I+   +  K+ EAEKL  EM  + I P  ++Y +MI G+    R DD
Sbjct: 144 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 203

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A  +FD M S    P+ VT+  ++   C A ++ E  ++LRE+  R +   + + +  L+
Sbjct: 204 AKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA-NTTTYNTLI 258

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C+  +LNAA D+ + MI   +  +     IL+  FC+ E  + A++L       E+I
Sbjct: 259 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF------EVI 312

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
               S +D++  +YN +I  +C   +  +A   F  L   GV  D   +N +I G   + 
Sbjct: 313 --QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 370

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
               A  +   M   G   D   Y  LI   L+ GE   +   +  M  +G S  +   +
Sbjct: 371 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 430

Query: 489 SVMESLFEDGRVQTASRVMKS 509
            V + L  DGR+  +   M S
Sbjct: 431 MVAD-LITDGRLDKSFSDMLS 450



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/447 (23%), Positives = 184/447 (41%), Gaps = 61/447 (13%)

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M+  G+ P   T+N ++ G  L  ++  A      M  +G+ +DVVTY T++NG  +   
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
              A  L ++M+E +I+P V+ Y+ +I          DA  +F EM    + PN  TY  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           ++ G C  G+  + Q++LR+M+ER I P D   F  L+    K G L  A  +   M+  
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINP-DVLTFNALISASVKEGKLFEAEKLCDEMLHR 179

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII---------------------L 370
            I  +   Y  +I  FCK   +D A  + D +   +++                     L
Sbjct: 180 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 239

Query: 371 RPQS--TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV----------------- 411
           R  S   L    ++YN +I   C       A+  F++++  GV                 
Sbjct: 240 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 299

Query: 412 -------------------LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
                              LD VA+N +I G  K    D A+++   +   GV  D   Y
Sbjct: 300 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 359

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +I  +  K   +DA      M ++GH P +S + +++    + G +  +  ++  M  
Sbjct: 360 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 419

Query: 513 KGVKENLDLVAKILEALLMRGHVEEAL 539
            G   +     K++  L+  G ++++ 
Sbjct: 420 NGFSGDA-FTIKMVADLITDGRLDKSF 445



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 182/415 (43%), Gaps = 22/415 (5%)

Query: 44  RWVERAGLFNH--------DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           R +E A L N         D  T+  ++  + ++G    A  +L  M +  ++ D  ++ 
Sbjct: 25  RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 84

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            +I+   K G   ++  +F  M + G+  +V +Y+ +       GR+  A+R    M+  
Sbjct: 85  AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 144

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            I P   T+N ++       KL  A +  ++M  R I  D VTYN+MI G+ +  + D+A
Sbjct: 145 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 204

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           + +F  M      P V+++ T+I  Y   +R D+ +++  E+    +  N  TY  L+ G
Sbjct: 205 KHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 260

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            C+   +   Q + +EM+   + P   +  + L G  C++  L  A ++ + +    I  
Sbjct: 261 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF-CENEKLEEALELFEVIQMSKIDL 319

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   Y I+I   CK    D A  L   L        P   ++ +  +YN MI   C    
Sbjct: 320 DTVAYNIIIHGMCKGSKVDEAWDLFCSL--------PIHGVEPDVQTYNVMISGFCGKSA 371

Query: 396 TGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              A + F ++   G   D   +N LIRG  K G  D + E++  M   G   DA
Sbjct: 372 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 426



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 1/202 (0%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + +V   AK  +  +Q  R + R GL   +  T+  +I     V  LN A+ +  +M 
Sbjct: 220 NTIIDVYCRAKRVDEGMQLLREISRRGLV-ANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 278

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
             GV  D     +L+  + +   ++E++++F++++   ++    +Y+ +   + +  +  
Sbjct: 279 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 338

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F  +   G+EP   TYNVM+ GF     +  A   F  MK  G   D  TYNT+I
Sbjct: 339 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 398

Query: 204 NGYNRFKKMDEAEKLFAEMKEK 225
            G  +  ++D++ +L +EM+  
Sbjct: 399 RGCLKAGEIDKSIELISEMRSN 420



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/271 (21%), Positives = 120/271 (44%), Gaps = 9/271 (3%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           ++N +I  LC  G+  +A     +++ KG+ +D V +  ++ G  K G+  SA  ++  M
Sbjct: 12  TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 71

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
               +  D   Y  +I+   + G  +DA+     M+E G +P    +  +++     GR 
Sbjct: 72  EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 131

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A R+++ M+E+ +  ++     ++ A +  G + EA    D M+     P+   ++S+
Sbjct: 132 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 191

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +    +  +   A  + D         D+ ++  ++D    A +      +L +I  +G 
Sbjct: 192 IYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 247

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           V +  + + LI G  +  N   A D+   MI
Sbjct: 248 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 278



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 3/173 (1%)

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+E G +P    F +++  L  +GRV  A+ ++  MV KG+  ++     I+  +   G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
            + AL  +  M ++   P+   + +++  L + G    A  L    L +    ++ +Y  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
           ++D   + G+  +A  +L  ++E+    D  + + LI+   +EG   +A+ L 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 173


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 240/532 (45%), Gaps = 26/532 (4%)

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           ++  L   R   SY+ +   + R+G  + A  +  ++++    PT  +Y  ++       
Sbjct: 68  LLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAER 127

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +   A+    DM++ G+  DVVTY T+I G      +D+A +L  EM E  IEP V+ Y+
Sbjct: 128 RTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYS 187

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +++GY    R +   ++F+EM    ++P+ V YT L+  LC  GK+ +  +V+ +M+ER
Sbjct: 188 CLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMER 247

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            + P +   +  L+   CK G +  A  +   M+   +  +A  Y  LI         D 
Sbjct: 248 GLEP-NVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDE 306

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG--VLD 413
           A+ LL++++  E ++ P         ++N +I  LC  G+  +A    R +M +     +
Sbjct: 307 AMGLLEEMIHGETMVEPNVV------TFNSVIHGLCKTGRMRQA-FQVRDMMAENGCACN 359

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V FN LI G  +      A E++  M   G+  D+  Y  LI  + +  +   A++ L 
Sbjct: 360 LVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLS 419

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA---KILEALL 530
            M  DG  P    +  ++ +L E G ++ A      M  K  K  LD+VA    I  A  
Sbjct: 420 KMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCK--LDVVAYSTMIHGACR 476

Query: 531 MRGH--VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           +R     EE L     M+  G +P+   +  L+++ +  G   AA ++L        + D
Sbjct: 477 LRDRKSAEEFLKH---MLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPD 533

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL--NQEG 635
           +A ++ ++    A G T     ++ ++  K    D K    +   L  N EG
Sbjct: 534 VAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEG 585



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 208/445 (46%), Gaps = 14/445 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +  +   L   + +  A+   R ++ +G+   D  T+  +I  L     ++ A  +L +M
Sbjct: 116 YTTLMRALCAERRTGQAVGLLRDMQASGV-RPDVVTYGTLIRGLCDAADVDKAVELLREM 174

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G++ +  ++  L++ Y K G  +   K+F+ M   G+E  V  Y  L   + R G+ 
Sbjct: 175 CESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKV 234

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +  +KM+  G+EP   TYNV++        ++ A+    +M  +G++LD VTYNT+
Sbjct: 235 KKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTL 294

Query: 203 INGYNRFKKMDEAEKLFAEM--KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           I G +   +MDEA  L  EM   E  +EP V+++ ++I G     R   A ++ D M   
Sbjct: 295 ITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAEN 354

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
               N VT+  L+ GL    K+ +  +++ EM    + P D+  +  L+   CK   ++ 
Sbjct: 355 GCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEP-DSFTYSILINGFCKMWQVDR 413

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  +L  M R  I  E  HY  L+   C+  M ++A    D++              ++ 
Sbjct: 414 AESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM---------HKNCKLDV 464

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y+ MI   C       AE F + ++ +G++ D V ++ LI   +  G+  +A  ++K 
Sbjct: 465 VAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQ 524

Query: 440 MGRRGVPRDADAYICLIESYLRKGE 464
           M   G   D   +  LI+ Y  KG+
Sbjct: 525 MTASGFVPDVAVFDSLIKGYGAKGD 549



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 219/505 (43%), Gaps = 59/505 (11%)

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           ++V +   M+  GV   V +Y  L + +        A     +M   GIEP    Y+ +L
Sbjct: 131 QAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLL 190

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G+  + + E   + FE+M  RGI  DVV Y  +I+   R  K+ +A ++  +M E+ +E
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE 250

Query: 229 PTV-----------------------------------ISYTTMIKGYVAVERADDALRI 253
           P V                                   ++Y T+I G   V   D+A+ +
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGL 310

Query: 254 FDEMKSFD--VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            +EM   +  V+PN VT+ +++ GLC  G+M +  +V R+M+       +   F  L+G 
Sbjct: 311 LEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQV-RDMMAENGCACNLVTFNLLIGG 369

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
             +   +  A +++  M    +  ++  Y ILI  FCK    DRA  LL K+    I   
Sbjct: 370 LLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGI--- 426

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
                + E   Y P++  LC  G   +A  FF ++ K   LD VA++ +I G  +  +  
Sbjct: 427 -----EPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRK 481

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SA E +K M   G+  D+  Y  LI  +   G+   A+  L  M   G  P  ++F S++
Sbjct: 482 SAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLI 541

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           +     G  +    +++ M  K +  +  +++ I   L+     +  L          SV
Sbjct: 542 KGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALL---------QSV 592

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDF 576
           P FD+ +S    KG  I++ +L + 
Sbjct: 593 PGFDTEVS----KGAVISSHELTNM 613



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 3/197 (1%)

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
           RDA +Y  ++ +  R+G   DA   L  ++     P +  + ++M +L  + R   A  +
Sbjct: 76  RDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           ++ M   GV+ ++     ++  L     V++A+  +  M +SG  PN   +  LL    +
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+     K+ +   GR    D+  Y  ++D+L   GK   A  ++ K+ME+G   +  +
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 624 SDKLIAGLNQEGNTKQA 640
            + LI  + +EG+ K+A
Sbjct: 256 YNVLINSMCKEGSVKEA 272


>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 607

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/570 (22%), Positives = 249/570 (43%), Gaps = 13/570 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D++++   I   GR G+   A  +L +MP +G   D   +  +I++  K G  + +V   
Sbjct: 32  DQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFL 91

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G+    +SY A      R GR+ +A     +ML+  + P    YN  +     +
Sbjct: 92  MEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKA 151

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + E A+   ++M + G++ DV++Y++ I+   R  + +EA +LF +M+   + P VI+Y
Sbjct: 152 GQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITY 211

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            + I       R  +A+ +  ++ +  + PN ++Y++++      G+      +LREM  
Sbjct: 212 GSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKA 271

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P +   +   +    K G    A D+L+ M  + +P +   Y  +I+   K + + 
Sbjct: 272 MRLAP-NIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWK 330

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            AI +L ++        P   L   A SYN  I      GQ  +A+   R++   GV   
Sbjct: 331 EAIDILREM--------PTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQR 382

Query: 415 V-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           V  +N+ I   +K      A  +++ M   G+     +Y   I++  +      AK  L 
Sbjct: 383 VIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLR 442

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M   G +P    + S +++     + + A  +++ M   G+  ++   +  + A     
Sbjct: 443 EMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGD 502

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
             +EAL  +  M  +G  P+   ++S +   S+ G+   AV LL          ++ SY 
Sbjct: 503 QWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYS 562

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
             +DA +  G+     ++L ++   G V D
Sbjct: 563 SAIDACVRGGQWKEGIALLEEMRGSGVVPD 592



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/272 (19%), Positives = 114/272 (41%), Gaps = 36/272 (13%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A+   R +   GL + +  ++   I+   + G+   A+ +L +MP  GV      +  
Sbjct: 330 KEAIDILREMPTVGL-SPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNS 388

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
            I +  K    +E++ +   M  +G+  +V SY +      +   ++ AK    +M + G
Sbjct: 389 AIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVG 448

Query: 157 IEPTRHTYNVML--------WGFFLSL---------------------------KLETAI 181
           + P    YN  +        W   + L                           + + A+
Sbjct: 449 LAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEAL 508

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              ++M + G++ D++ YN+ I+  ++  +   A  L  EM+   + P +ISY++ I   
Sbjct: 509 AVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDAC 568

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           V   +  + + + +EM+   V P+ +TY AL+
Sbjct: 569 VRGGQWKEGIALLEEMRGSGVVPDVITYHALM 600



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/336 (20%), Positives = 132/336 (39%), Gaps = 12/336 (3%)

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           + G    A  +L+ M       +   Y  +I+   K   +  A+  L ++        P 
Sbjct: 45  RGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEM--------PT 96

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
             +  +A SY   I      G+   A    R+++ + V  + + +N+ I   +K G  + 
Sbjct: 97  KGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEI 156

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  +VK M   G+  D  +Y   I +  R G   +A    + M   G +P    + S + 
Sbjct: 157 AVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIA 216

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
           +    GR + A  +++ +   G+  N+   + ++ A    G  + AL  +  M      P
Sbjct: 217 ACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAP 276

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           N   +++ +   ++ G+   A+ LL          D+ SY  V+DA     +   A  IL
Sbjct: 277 NIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDIL 336

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            ++   G   +  S +  I    + G  K+A  L R
Sbjct: 337 REMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLR 372


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/616 (22%), Positives = 271/616 (43%), Gaps = 43/616 (6%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F  N   ++L      + AL  FR    A +   ++ T+  +I      G L+ A  +L 
Sbjct: 23  FSCNCALDMLCRLNRRQEALALFRNA-MARICMPNKFTYGILIRGFSSAGDLDIAIQLLE 81

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G + +  +   L++     G V E+++ F  M +      V +Y AL   + + G
Sbjct: 82  EMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAG 140

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           ++  A+    +M+++G  P   T++ ++ G       E A R  ED+  RG+      + 
Sbjct: 141 KFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFE 200

Query: 201 TMINGY-NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           T+I    N++  ++ A K+   +  K   PTV+ +  +I G+   +  D A ++ + M  
Sbjct: 201 TIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIE 260

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               PN  T+T L+ GLC A ++ E Q++L +MV     P +   +  ++   CK G ++
Sbjct: 261 KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSP-NVVTYSTVINGLCKQGQVD 319

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A ++ + M R + P     + ILI+  CKA+  + A +L  ++  +E    P      +
Sbjct: 320 DAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM--RETGCAP------D 371

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV--LDPVAFNNLIRGHSKEGNPDSAFEIV 437
             +YN +I  LC + Q  +A   F+ + + GV   + V ++ L  G++  G    A  I 
Sbjct: 372 IITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIF 431

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
            ++  +G   D   Y  LI  Y +     +    ++ M   G  P  +   +V+  LFE 
Sbjct: 432 SMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEG 491

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
              + A ++  SM  +G  ++  +   ++E +      ++AL  ++              
Sbjct: 492 NHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLE-------------- 537

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
             V+ ++ +                    ++ + ++++L   GKT +A  +L K+ E+G 
Sbjct: 538 -QVIDKRDRKFNPSS--------------SAVDALVESLCQVGKTDDAKQLLHKMSERGF 582

Query: 618 VTDWKSSDKLIAGLNQ 633
                S ++L++GL++
Sbjct: 583 AAAVSSYNRLLSGLSR 598



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/563 (24%), Positives = 247/563 (43%), Gaps = 54/563 (9%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  +V S +    ++ R  R   A   F   ++    P + TY +++ GF  +  L+ AI
Sbjct: 18  VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAI 77

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +  E+MKS G   + V + T++ G     ++ EA + F  M  K+  P V++YT ++   
Sbjct: 78  QLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHAL 136

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               + D+A  +  EM +    P+ VT++ L+ GLC  G   +  +VL ++++R +   D
Sbjct: 137 CKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSD 196

Query: 302 NSVFMKLLGVQC-KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
            + F  ++   C K   +  A+ VL  +I          + ++I  FCKA+  D A KLL
Sbjct: 197 -AAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL 255

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + ++EK  +  P         ++  +I  LC   + G+A+    +++  G   + V ++ 
Sbjct: 256 EVMIEKGCV--PN------VFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +I G  K+G  D A+E+ ++M RR  P +   +  LI+   +     +A+     M E G
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367

Query: 480 HSP--------------------ASSLFRSVMES------------LFED----GRVQTA 503
            +P                    A  LF+++ ES            LF      GR+  A
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 427

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS- 562
            R+   +V+KG   +L     ++          E +  ++ M   G  P  ++L +VL  
Sbjct: 428 CRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 487

Query: 563 --EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
             E   T  A++L D    R C  D   Y  V++ +  A K   A ++L ++++K     
Sbjct: 488 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKF 547

Query: 621 WKSS---DKLIAGLNQEGNTKQA 640
             SS   D L+  L Q G T  A
Sbjct: 548 NPSSSAVDALVESLCQVGKTDDA 570



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 130/600 (21%), Positives = 264/600 (44%), Gaps = 61/600 (10%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           H  +   L  A     AL+ FR + +      D  T+  ++  L + GK + A+ +L +M
Sbjct: 95  HTTLMKGLCDAGRVVEALEHFRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREM 152

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR--G 140
             +G   D   F  LI+   K G  +++ ++ + + Q G+  S    DA F+ I++R   
Sbjct: 153 VAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNS----DAAFETIIQRLCN 208

Query: 141 RYM---MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI----- 192
           +Y    +A +    ++++G  PT   +N+++ GF  +  L++A +  E M  +G      
Sbjct: 209 KYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF 268

Query: 193 ------------------------------SLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
                                         S +VVTY+T+ING  +  ++D+A +LF  M
Sbjct: 269 TFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 328

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           + +N  P V+++  +I G    +R ++A +++  M+     P+ +TY +L+ GLC + ++
Sbjct: 329 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQV 388

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E  ++ + + E  +   +   +  L       G +  A  +   ++      +   Y  
Sbjct: 389 DEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTS 448

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           LI  +CK       ++L++++  K    R         ++ + ++  L     T +A   
Sbjct: 449 LILEYCKTSRAVEVVELVEEMASKGFPPR--------VNTLSAVLGGLFEGNHTERAIQL 500

Query: 403 FRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV-KIMGRRG--VPRDADAYICLIES 458
           F  +  +G   D + +N ++ G ++    D A  ++ +++ +R       + A   L+ES
Sbjct: 501 FDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVES 560

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             + G+  DAK  L  M E G + A S +  ++  L    R   A++V ++MV  G    
Sbjct: 561 LCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPE 620

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLD 575
           +  V  ++  L     V++A   +  M + G  P+    ++L+    + G+   A KLL+
Sbjct: 621 ISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLE 680



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 116/531 (21%), Positives = 233/531 (43%), Gaps = 44/531 (8%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           + E A +    V + G+ N D      +  +  +   +  A  +L  +  KG      MF
Sbjct: 176 SEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMF 235

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            ++I  + K   +  + K+ ++M + G   +V ++  L   + +  R   A++   KM+ 
Sbjct: 236 NLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVM 295

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G  P   TY+ ++ G     +++ A   F+ M+ R    +VVT+N +I+G  + K+++E
Sbjct: 296 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355

Query: 215 AEKLFAEMKEKNIEPTVI------------------------------------SYTTMI 238
           A +L+  M+E    P +I                                    +Y+T+ 
Sbjct: 356 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 415

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            GY A+ R  DA RIF  +      P+  TYT+L+   C   + VEV +++ EM  +  P
Sbjct: 416 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 475

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P+ N++   +LG   +  H   A  +  +M       +A  Y +++E   +A  +D+A+ 
Sbjct: 476 PRVNTL-SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALA 534

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AF 417
           +L+++++K          +  +S+ + +++ LC  G+T  A+    ++ ++G    V ++
Sbjct: 535 VLEQVIDKR-----DRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSY 589

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N L+ G S+    D A ++ + M   G   +      +I       +  DA   +  M +
Sbjct: 590 NRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 649

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
            G  P      +++    + GR   A ++++ M E G++ N D    +LE 
Sbjct: 650 LGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN-DTTHDLLEC 699



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 210/459 (45%), Gaps = 17/459 (3%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           K E  + FF+  +SR +  +V + N  ++   R  +  EA  LF     +   P   +Y 
Sbjct: 3   KPELVLLFFDWARSR-VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYG 61

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I+G+ +    D A+++ +EMKS   + NAV +T L+ GLCDAG++VE  +  R M + 
Sbjct: 62  ILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD 121

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
             P  D   +  L+   CK+G  + A  +L+ M+      +   +  LI+  CK    ++
Sbjct: 122 CAP--DVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQ 179

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK-AEIFFRQLMKKGVLDP 414
           A ++L+     ++I R     D   +++  +IQ LC+   + + A      ++ KG    
Sbjct: 180 AFRVLE-----DVIQRGMGNSD---AAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 231

Query: 415 V-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           V  FN +I G  K  + DSA++++++M  +G   +   +  LI    +     +A+  L+
Sbjct: 232 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 291

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+  G SP    + +V+  L + G+V  A  + + M  +    N+     +++ L    
Sbjct: 292 KMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 351

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC-IIDLASY 589
            +EEA      M ++G  P+   ++SL+  L +  +   A +L            +  +Y
Sbjct: 352 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTY 411

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
             +     A G+  +A  I   +++KG   D  +   LI
Sbjct: 412 STLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 129/279 (46%), Gaps = 11/279 (3%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           S N  +  LC   +  +A   FR  M +  + +   +  LIRG S  G+ D A ++++ M
Sbjct: 24  SCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEM 83

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G   +A  +  L++     G   +A     +M +D  +P    + +++ +L + G+ 
Sbjct: 84  KSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDC-APDVMTYTALVHALCKAGKF 142

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSL 557
             A  +++ MV +G   +    + +++ L   G  E+A   ++ ++Q G   S   F+++
Sbjct: 143 DEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETI 202

Query: 558 LSVLSEKGKTIA-AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           +  L  K  ++  A K+L   + +     +  +  V++    A    +AY +L  ++EKG
Sbjct: 203 IQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKG 262

Query: 617 GVTDWKSSDKLIAGL---NQEGNTKQADILSRMIRGEMS 652
            V +  +   LI GL   N+ G  +Q  +L +M+ G  S
Sbjct: 263 CVPNVFTFTILITGLCKANRVGEAQQ--LLEKMVMGGCS 299


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/603 (23%), Positives = 267/603 (44%), Gaps = 34/603 (5%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG--VERSVKSYDAL 132
           AR +  ++ ++G+  D   + +L+     +   QE++++  IM   G      V SY  +
Sbjct: 36  ARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
                + G        +N+ML + I P   TYN ++     +  ++ A+     M   G+
Sbjct: 95  INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             D +TYN++++G+    +  EA     +M+   +EP V++Y +++       R  +A +
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 214

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           IFD M    +KP   TY  LL G    G +VE+  +L  MV   I P ++ VF  L+   
Sbjct: 215 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP-NHYVFSILVCAY 273

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
            K   +  A  V   M +  +   A  YG +I   CK+   + A+   ++++++   L P
Sbjct: 274 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG--LSP 331

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
            + +      YN +I  LC   +  +AE    +++ +G+ L+ + FN++I  H KEG   
Sbjct: 332 GNIV------YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 385

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            + ++  +M R GV  D   Y  LI+ Y   G+  +A   L SM+  G  P    + +++
Sbjct: 386 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-- 549
               +  R++ A  + + M   GV  ++     IL+ L        A      + +SG  
Sbjct: 446 NGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQ 505

Query: 550 -SVPNFDSLLSVLSEKGKTIAAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
             +  ++ +L  L +   T  A+++  + CL  D  ++  ++  ++DALL  G+   A  
Sbjct: 506 LELSTYNIILHGLCKNKLTDDALRMFQNLCL-MDLKLEARTFNIMIDALLKVGRNDEAKD 564

Query: 608 ILFKIMEKGGVTDW----------------KSSDKLIAGLNQEGNTKQADILSRMIRGEM 651
           +       G V ++                +  D+L   +   G T  + +L+ ++R  +
Sbjct: 565 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 624

Query: 652 SRG 654
            RG
Sbjct: 625 QRG 627



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 213/440 (48%), Gaps = 16/440 (3%)

Query: 79  LLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           LLD M + G+  +  +F +L+ +Y K+  V+E++ +F  M+Q G+  +  +Y A+  ++ 
Sbjct: 250 LLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILC 309

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A  YF +M+ EG+ P    YN ++ G     K E A     +M  RGI L+ +
Sbjct: 310 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 369

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +N++I+ + +  ++ E+EKLF  M    ++P +I+Y+T+I GY    + D+A ++   M
Sbjct: 370 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 429

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  +KP+ VTY+ L+ G C   +M +   + REM    + P   +  + L G+  ++  
Sbjct: 430 VSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLF-QTRR 488

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             AA ++   + +     E   Y I++   CK ++ D A+++   L   +        L 
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMD--------LK 540

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
           +EA ++N MI  L   G+  +A+  F      G++ +   +  +      +G  +   ++
Sbjct: 541 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 600

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G   D+     ++   L++GE   A T L SMI++ H    +   S+   L  
Sbjct: 601 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLS 659

Query: 497 DGRVQTASRVM----KSMVE 512
            G+ Q   R +    KS +E
Sbjct: 660 GGKYQEYHRFLPEKYKSFIE 679



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 235/512 (45%), Gaps = 35/512 (6%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L +   ++ A  +L  M K GV  D   +  ++  +   G  +E++     M
Sbjct: 125 TYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM 184

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +  GVE  V +Y++L   + + GR   A++ F+ M   G++P   TY  +L G+     L
Sbjct: 185 RSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 244

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                  + M   GI  +   ++ ++  Y + +K++EA  +F++M+++ + P  ++Y  +
Sbjct: 245 VEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAV 304

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I       R +DA+  F++M    + P  + Y +L+ GLC   K    ++++ EM++R I
Sbjct: 305 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 364

Query: 298 PPKDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
               N++F   ++   CK G +  +  +   M+R+ +  +   Y  LI+ +C A   D A
Sbjct: 365 CL--NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 422

Query: 357 IKLLDKLVEKEIILRPQ----STL------------------DMEAS-------SYNPMI 387
            KLL  +V   + ++P     STL                  +ME+S       +YN ++
Sbjct: 423 TKLLASMV--SVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIIL 480

Query: 388 QHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
           Q L    +T  A+  +  + K G  L+   +N ++ G  K    D A  + + +    + 
Sbjct: 481 QGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 540

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            +A  +  +I++ L+ G   +AK    +   +G  P    +R + E++   G ++   ++
Sbjct: 541 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 600

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
             SM + G   +  ++  I+  LL RG +  A
Sbjct: 601 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 632



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 226/494 (45%), Gaps = 15/494 (3%)

Query: 25  LVYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN ++HG  +S   + A+ F + +   G+   D  T+  +++ L + G+   AR I  
Sbjct: 159 MTYNSIVHGFCSSGQPKEAIVFLKKMRSDGV-EPDVVTYNSLMDYLCKNGRCTEARKIFD 217

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M K+G++ +   +  L++ Y  KG + E   + D+M + G+  +   +  L     ++ 
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A   F+KM  +G+ P   TY  ++     S ++E A+ +FE M   G+S   + YN
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++I+G     K + AE+L  EM ++ I    I + ++I  +    R  ++ ++FD M   
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 397

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            VKP+ +TY+ L+ G C AGKM E  K+L  MV   + P D   +  L+   CK   +  
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-DCVTYSTLINGYCKISRMKD 456

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  + + M    +  +   Y I+++   +      A +L   +         +S   +E 
Sbjct: 457 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT--------KSGRQLEL 508

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           S+YN ++  LC N  T  A   F+ L    + L+   FN +I    K G  D A ++   
Sbjct: 509 STYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 568

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
               G+  +   Y  + E+ + +G   +      SM ++G +  S +   ++  L + G 
Sbjct: 569 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 628

Query: 500 VQTASRVMKSMVEK 513
           +  A   +  + EK
Sbjct: 629 ITRAGTYLSMIDEK 642



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 129/560 (23%), Positives = 244/560 (43%), Gaps = 17/560 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  +I  + K+G + ++   ++ M    +  +V +Y+++   + +      A      M+
Sbjct: 91  YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 150

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+ P   TYN ++ GF  S + + AI F + M+S G+  DVVTYN++++   +  +  
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 210

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA K+F  M ++ ++P + +Y T+++GY       +   + D M    + PN   ++ L+
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 270

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLS 332
                  K+ E   V  +M ++ + P  N+V +  ++G+ CKSG +  A    + MI   
Sbjct: 271 CAYAKQEKVEEAMLVFSKMRQQGLNP--NAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 328

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  LI   C    ++RA +L+ +++++ I L            +N +I   C 
Sbjct: 329 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN--------TIFFNSIIDSHCK 380

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+  ++E  F  +++ GV  D + ++ LI G+   G  D A +++  M   G+  D   
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI  Y +     DA      M   G SP    +  +++ LF+  R   A  +   + 
Sbjct: 441 YSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 500

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEAL---GRIDLMMQSGSVPNFDSLLSVLSEKGKTI 568
           + G +  L     IL  L      ++AL     + LM        F+ ++  L + G+  
Sbjct: 501 KSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRND 560

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKL 627
            A  L         + +  +Y  + + ++  G  L     LF  ME  G T D    + +
Sbjct: 561 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG-LLEELDQLFLSMEDNGCTVDSGMLNFI 619

Query: 628 IAGLNQEGNTKQADILSRMI 647
           +  L Q G   +A     MI
Sbjct: 620 VRELLQRGEITRAGTYLSMI 639


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/481 (23%), Positives = 221/481 (45%), Gaps = 12/481 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQ 119
           +++ L   GK   A  +L  M + G     D+  +  +I+ + K+G V ++  +F  M Q
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G+   + +Y ++   + +      A+ +  +M+++G+ P   TYN +++G+  + + + 
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+R F++M+ + I  DVV  NT++    ++ K+ EA  +F  M  K   P V SYT M+ 
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY       D   +FD M    + P+  T+  L+    + G + +   +  EM +  + P
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
              + +M ++   C+ G ++ A +    MI   +  +   Y  LI+ FC      +A +L
Sbjct: 430 HVVT-YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
           + +++         + + ++   +  +I +LC  G+   A+  F   +  G+  D V +N
Sbjct: 489 ISEIM--------NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L+ G+   G  + A  +   M   G+  +   Y  L+  Y + G   +  +    M++ 
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P++ L+  +++ LFE GR   A      M E G+  N    + +L  L      +EA
Sbjct: 601 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 660

Query: 539 L 539
           +
Sbjct: 661 I 661



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 127/559 (22%), Positives = 242/559 (43%), Gaps = 47/559 (8%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V +      +   A   F+ + + G+   D  T+  ++  L +   ++ A   L  M
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDLVTYSSVVHALCKARAMDKAEAFLRQM 282

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KGV  D   +  LI  Y   G  +E+V++F  M++  +   V + + L   + + G+ 
Sbjct: 283 VNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKI 342

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F+ M  +G  P   +Y +ML G+     L      F+ M   GI+ D+ T+N +
Sbjct: 343 KEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVL 402

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  Y     +D+A  +F EM++  ++P V++Y T+I     + + DDA+  F++M    V
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVE---------------------RYIPPK- 300
            P+   Y  L+ G C  G +++ ++++ E++                      R +  + 
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522

Query: 301 ------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                       D  V+  L+   C  G +  A  V  AM+   I      YG L+  +C
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 582

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K    D  + L  ++++K I  +P + L      YN +I  L   G+T  A++ F ++ +
Sbjct: 583 KIGRIDEGLSLFREMLQKGI--KPSTIL------YNIIIDGLFEAGRTVPAKVKFHEMTE 634

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G+ ++   ++ ++RG  K    D A  + K +    V  D      +I    +     +
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           AK    S+   G  P +  +  ++ +L ++G V+ A  +  SM   G + +  L+  ++ 
Sbjct: 695 AKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754

Query: 528 ALLMRGHVEEA---LGRID 543
            LL +  +  A   L +ID
Sbjct: 755 ELLKKNEIVRAGAYLSKID 773



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 133/571 (23%), Positives = 253/571 (44%), Gaps = 47/571 (8%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRY 142
           + G++ D  +   L++ + +     E++ I      +LG    V SY+ L K +  +G+ 
Sbjct: 141 RTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKS 200

Query: 143 MMAKRYFNKMLSEG---IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
             A     +M++EG     P    YN ++ GFF    +  A   F++M  RGI  D+VTY
Sbjct: 201 GQADDLL-RMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 259

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           +++++   + + MD+AE    +M  K + P   +Y  +I GY +  +  +A+R+F EM+ 
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 319

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+ V    L+  LC  GK+ E + V   M  +   P   S  + L G   K G L 
Sbjct: 320 QSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATK-GCLV 378

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
              D+   M+   I  +   + +LI+ +    M D+A+ + +++ +  +  +P       
Sbjct: 379 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV--KPHVV---- 432

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +Y  +I  LC  G+   A   F Q++ +GV+ D  A++ LI+G    G+   A E++ 
Sbjct: 433 --TYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELIS 490

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            +   G+  D   +  +I +  + G   DA+   D  +  G  P + ++  +M+     G
Sbjct: 491 EIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVG 550

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL 558
           +++ A RV  +MV  G++ N+     ++      G ++E L     M+Q G  P+     
Sbjct: 551 KMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS----- 605

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
           ++L                           Y  ++D L  AG+T+ A     ++ E G  
Sbjct: 606 TIL---------------------------YNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638

Query: 619 TDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
            +  +   ++ GL +     +A  L + +R 
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 184/401 (45%), Gaps = 10/401 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G+  D   F VLI++Y   G++ +++ IF+ M+  GV+  V +Y  +   + R G+
Sbjct: 387 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   FN+M+ +G+ P ++ Y+ ++ GF     L  A     ++ + G+ LD+V + +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +IN   +  ++ +A+ +F       + P  + Y  ++ GY  V + + ALR+FD M S  
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           ++PN V Y  L+ G C  G++ E   + REM+++ I P    ++  ++    ++G    A
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS-TILYNIIIDGLFEAGRTVPA 625

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
                 M    I      Y I++    K   +D AI L  +L    +         ++  
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV--------KIDII 677

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD-PVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           + N MI  +    +  +A+  F  + + G++   V ++ +I    KEG  + A ++   M
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSM 737

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
              G   D+     ++   L+K E   A   L  + E   S
Sbjct: 738 QNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 778



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 117/227 (51%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VGK+  A  +   M   G++ +   +  L+  Y K G + E + +F  M Q G++ S   
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y+ +   +   GR + AK  F++M   GI   + TY+++L G F +   + AI  F++++
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 668

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  + +D++T NTMI G  + ++++EA+ LFA +    + P  ++Y+ MI   +     +
Sbjct: 669 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVE 728

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           +A  +F  M++   +P++     ++  L    ++V     L ++ ER
Sbjct: 729 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/585 (23%), Positives = 253/585 (43%), Gaps = 57/585 (9%)

Query: 87  VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
           V W+      LI+ Y K   +  ++ + + M   GV   V  Y++L       G    A 
Sbjct: 188 VGWN-----ALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAAL 242

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
               +M ++G+EP   TY  ++  +     ++ A   +E M   G+  DVVT + +++G 
Sbjct: 243 EVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGL 302

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM--------- 257
            R  +  EA  LF EM +  + P  ++Y T+I       R  ++L +  EM         
Sbjct: 303 CRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDL 362

Query: 258 --------------------------KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
                                     +S ++ PN VTYT L+   C AG +   ++VL +
Sbjct: 363 VMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQ 422

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M E+ + P +   F  ++    K G L  AAD ++ M    I      YG LI+ F K +
Sbjct: 423 MEEKSVIP-NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQ 481

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSY--NPMIQHLCHNGQTGKAEIFFRQLMKK 409
             + A+ +   ++ + +          EA+++  + ++  L  NG    AE  F+ + ++
Sbjct: 482 GQEAALDVYRDMLHEGV----------EANNFVVDSLVNGLRKNGNIEGAEALFKDMDER 531

Query: 410 G-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G +LD V +  L+ G  K GN  +AF++ + +  + +  DA  Y   I      G+ ++A
Sbjct: 532 GLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEA 591

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           K+ L  M   G  P  + + +++ +   +G+   A +++K M    +K NL     ++  
Sbjct: 592 KSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVG 651

Query: 529 LLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           LL  G V++A   ++ M  +G  P       +L   S   +    +++ +  +G     D
Sbjct: 652 LLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHAD 711

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           +  Y  ++  L   G   NA  +L +++ +G   D  + + LI G
Sbjct: 712 ITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILG 756



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/488 (23%), Positives = 220/488 (45%), Gaps = 29/488 (5%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  +++ LG+ GK+  A+ +L       +  +   + VL++++ + G +  + ++ 
Sbjct: 361 DLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVL 420

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M++  V  +V ++ ++   +++RG    A  Y  KM   GI P   TY  ++ GFF  
Sbjct: 421 LQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKF 480

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              E A+  + DM   G+  +    ++++NG  +   ++ AE LF +M E+ +    ++Y
Sbjct: 481 QGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNY 540

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           TT++ G         A ++  E+   ++ P+AV Y   +  LC  GK  E +  L+EM  
Sbjct: 541 TTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRN 600

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D + +  ++  +C+ G  + A  +LK M R SI      Y  L+    +A +  
Sbjct: 601 TGLEP-DQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVK 659

Query: 355 RAIKLLDK----------LVEKEIIL------RPQSTLDM-----------EASSYNPMI 387
           +A  LL++          L  + ++       RP   L++           + + YN ++
Sbjct: 660 KAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLV 719

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             LC +G    A +   +++ +G+  D + FN LI GH K  + D+AF I   M  +G+ 
Sbjct: 720 HVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLS 779

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            +   +  L+      G   +A T L  M + G  P +  +  ++    +      A R+
Sbjct: 780 PNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRL 839

Query: 507 MKSMVEKG 514
              MV KG
Sbjct: 840 YCEMVSKG 847



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 140/612 (22%), Positives = 270/612 (44%), Gaps = 20/612 (3%)

Query: 39  ALQFFRWVERAGLF-NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
           A   FR +++ G+  NH   T+  +I+ L +  + + +  +L +M  +GV  D  M+  L
Sbjct: 311 AYALFREMDKIGVAPNH--VTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTAL 368

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           ++  GK+G ++E+  +    +   +  +  +Y  L     R G    A++   +M  + +
Sbjct: 369 MDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSV 428

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
            P   T++ ++ G      L  A  +   MK  GI+ +VVTY T+I+G+ +F+  + A  
Sbjct: 429 IPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALD 488

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           ++ +M  + +E       +++ G       + A  +F +M    +  + V YT L+ GL 
Sbjct: 489 VYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLF 548

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             G M    KV +E++E+ + P D  V+   +   C  G  + A   LK M    +  + 
Sbjct: 549 KTGNMPAAFKVGQELMEKNLSP-DAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQ 607

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y  +I   C+     +A+KLL ++    I  +P         +Y  ++  L   G   
Sbjct: 608 ATYNTMIAARCREGKTSKALKLLKEMKRNSI--KPNLI------TYTTLVVGLLEAGVVK 659

Query: 398 KAEIFFRQLMKKGVLDPVAFNN--LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
           KA+    ++   G   P +  +  +++  S    PD   EI ++M   G+  D   Y  L
Sbjct: 660 KAKFLLNEMASAG-FAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTL 718

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           +      G   +A   LD M+  G +P +  F +++    +   +  A  +   M+ +G+
Sbjct: 719 VHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGL 778

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             N+     +L  L   G + EA   +  M + G  PN   +D L++  ++K   + A++
Sbjct: 779 SPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALR 838

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS-DKLIAGL 631
           L    + +  I   ++Y  ++     AG  +N    LF  M++ GV    S+ D L+ G 
Sbjct: 839 LYCEMVSKGFIPKASTYNSLMSDFAKAG-MMNQAKELFSEMKRRGVLHTSSTYDILLNGW 897

Query: 632 NQEGNTKQADIL 643
           ++  N  +  IL
Sbjct: 898 SKLRNGIEVRIL 909



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 236/536 (44%), Gaps = 19/536 (3%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           SY+     +  +G   +A    ++M   G+     T +  L G   +  +  A    E +
Sbjct: 117 SYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEML 176

Query: 188 -KSRGI-SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            + RGI  LDVV +N +I+GY + + M  A  +   M  + +   V+ Y +++ G+    
Sbjct: 177 VRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSG 236

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
            AD AL + + MK+  V+PN VTYTAL+   C    M E   +   MV   + P D    
Sbjct: 237 DADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP-DVVTL 295

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             L+   C+ G  + A  + + M ++ +      Y  LI++  KA     ++ LL ++V 
Sbjct: 296 SALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVS 355

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
           + ++        M+   Y  ++  L   G+  +A+   R      +  + V +  L+  H
Sbjct: 356 RGVV--------MDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAH 407

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            + GN D A +++  M  + V  +   +  +I   +++G    A   +  M + G +P  
Sbjct: 408 CRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNV 467

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             + ++++  F+    + A  V + M+ +GV+ N  +V  ++  L   G++E A      
Sbjct: 468 VTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKD 527

Query: 545 MMQSGSV---PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M + G +    N+ +L+  L + G   AA K+    + ++   D   Y   ++ L   GK
Sbjct: 528 MDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGK 587

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQK 657
              A S L ++   G   D  + + +IA   +EG T +A  L +    EM R S K
Sbjct: 588 FSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLK----EMKRNSIK 639



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/451 (21%), Positives = 191/451 (42%), Gaps = 10/451 (2%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            ++  L + G +  A  +  DM ++G+  D   +  L++   K G +  + K+   + + 
Sbjct: 507 SLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEK 566

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
            +      Y+     +   G++  AK +  +M + G+EP + TYN M+       K   A
Sbjct: 567 NLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKA 626

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           ++  ++MK   I  +++TY T++ G      + +A+ L  EM      PT +++  +++ 
Sbjct: 627 LKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA 686

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                R D  L I + M    +  +   Y  L+  LC  G       VL EM+ R I P 
Sbjct: 687 CSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAP- 745

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F  L+   CKS HL+ A  +   M+   +      +  L+     A     A  +L
Sbjct: 746 DTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVL 805

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNN 419
             +  K++ L P +       +Y+ ++          +A   + +++ KG +   + +N+
Sbjct: 806 SDM--KKVGLEPNNL------TYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNS 857

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+   +K G  + A E+   M RRGV   +  Y  L+  + +     + +  L  M E G
Sbjct: 858 LMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELG 917

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
             P+     S+  +    G    A R++K++
Sbjct: 918 FKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 126/273 (46%), Gaps = 1/273 (0%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
              H  V     G++  +  L+    +  AGL + D   +  ++ +L   G   +A  +L
Sbjct: 677 SLTHQRVLQACSGSRRPDVILEIHELMMGAGL-HADITVYNTLVHVLCCHGMARNATVVL 735

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M  +G+  D   F  LI  + K   +  +  I+  M   G+  ++ +++ L   +   
Sbjct: 736 DEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESA 795

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           GR   A    + M   G+EP   TY++++ G+        A+R + +M S+G      TY
Sbjct: 796 GRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 855

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N++++ + +   M++A++LF+EMK + +  T  +Y  ++ G+  +    +   +  +MK 
Sbjct: 856 NSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKE 915

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
              KP+  T +++       G   E +++L+ +
Sbjct: 916 LGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948


>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 917

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 179/362 (49%), Gaps = 11/362 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI  LGR GK+  A+ I       G       F  LI +YG+ G+ +E++ +F+ MK+ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298

Query: 122 VERSVKSYDALFKLILRRG-RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           +  ++ +Y+A+     + G  +    ++F++M    ++P R T+N +L         E A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAA 358

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
              F++M +R I  DV +YNT+++   +  +MD A ++ A+M  K I P V+SY+T+I G
Sbjct: 359 RNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDG 418

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +    R D+AL +F EM+  ++  + V+Y  LL      G+  E   +LREM    I  K
Sbjct: 419 FAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI-KK 477

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  LLG   K G  +    V   M R  +      Y  LI+ + K  +Y  A+++ 
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVF 537

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
            +   K   LR    L      Y+ +I  LC NG  G A     ++ K+G+  + V +N+
Sbjct: 538 REF--KSAGLRADVVL------YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589

Query: 420 LI 421
           +I
Sbjct: 590 II 591



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 175/383 (45%), Gaps = 13/383 (3%)

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + MI+   R+ K+  A+++F          TV +++ +I  Y      ++A+ +F+ MK 
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 260 FDVKPNAVTYTALLPGLCDAGKM--VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           + ++PN VTY A++   C  G M   +V K   EM    + P D   F  LL V  + G 
Sbjct: 297 YGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNCVQP-DRITFNSLLAVCSRGGL 354

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
             AA ++   M    I  +   Y  L++  CK    D A ++L ++  K I+        
Sbjct: 355 WEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIM-------- 406

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
               SY+ +I      G+  +A   F ++    + LD V++N L+  ++K G  + A +I
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDI 466

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M   G+ +D   Y  L+  Y ++G+  + K     M  +   P    + ++++   +
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSK 526

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
            G  + A  V +     G++ ++ L + +++AL   G V  A+  ID M + G  PN  +
Sbjct: 527 GGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586

Query: 557 LLSVLSEKGKTIAAVKLLDFCLG 579
             S++   G++    +  D+  G
Sbjct: 587 YNSIIDAFGRSATMERSADYSNG 609



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 134/263 (50%), Gaps = 7/263 (2%)

Query: 41  QFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
           +FF  ++R      DR T   ++ +  R G    AR +  +M  + ++ D   +  L+++
Sbjct: 325 KFFDEMQR-NCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDA 383

Query: 101 YGKKGIVQESVKIFDIMKQLGVER---SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
             K G +  +   F+I+ Q+  +R   +V SY  +     + GR+  A   F +M    I
Sbjct: 384 ICKGGQMDLA---FEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNI 440

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
              R +YN +L  +    + E A+    +M S GI  DVVTYN ++ GY +  K DE +K
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           +FAEMK +++ P +++Y+T+I GY       +A+ +F E KS  ++ + V Y+AL+  LC
Sbjct: 501 VFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALC 560

Query: 278 DAGKMVEVQKVLREMVERYIPPK 300
             G +     ++ EM +  I P 
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPN 583



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 179/392 (45%), Gaps = 19/392 (4%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           K+  A R FE   S G    V  ++ +I+ Y R    +EA  +F  MKE  + P +++Y 
Sbjct: 248 KVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYN 307

Query: 236 TMIK--GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK-VLREM 292
            +I   G   +E    A + FDEM+   V+P+ +T+ +LL  +C  G + E  + +  EM
Sbjct: 308 AVIDACGKGGMEFKQVA-KFFDEMQRNCVQPDRITFNSLL-AVCSRGGLWEAARNLFDEM 365

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
             R I  +D   +  LL   CK G ++ A ++L  M    I      Y  +I+ F KA  
Sbjct: 366 SNRRI-EQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGR 424

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
           +D A+ L  ++    I L        +  SYN ++      G++ +A    R++   G+ 
Sbjct: 425 FDEALNLFGEMRYLNIAL--------DRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D V +N L+ G+ K+G  D   ++   M R  V  +   Y  LI+ Y + G   +A   
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEV 536

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
                  G      L+ +++++L ++G V +A  ++  M ++G+  N+     I++A   
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
              +E    R       GS+P   S LS L+E
Sbjct: 597 SATME----RSADYSNGGSLPFSSSALSELTE 624



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 164/390 (42%), Gaps = 55/390 (14%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +++ + + G+++ A  IL  MP K +  +   +  +I+ + K G   E++ +F  M+ L 
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLN 439

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +     SY+ L  +  + GR   A     +M S GI+    TYN +L G+    K +   
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F +MK   +  +++TY+T+I+GY++     EA ++F E K   +   V+ Y+ +I   
Sbjct: 500 KVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDAL 559

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL------------CDAGKMVEVQKVL 289
                   A+ + DEM    + PN VTY +++                + G +      L
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSSAL 619

Query: 290 REMVERYIPPKDNSVFMKLLGV-----------QCKSG--HLNAAADVLKAMIRLSIPTE 336
            E+ E      + +  ++L G             CK G   L+   +V + M +L I   
Sbjct: 620 SELTE-----TEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQLEIKPN 674

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKL-----------------VEKEIILRPQSTLD-- 377
              +  ++    +   ++ A  LL++L                   + + L+ QS  D  
Sbjct: 675 VVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKV 734

Query: 378 --MEASS----YNPMIQHLCHNGQTGKAEI 401
             M+ S+    YN +   L H GQ   AE+
Sbjct: 735 NEMDGSTASAFYNALTDMLWHFGQKRGAEL 764



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 23/260 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           DR ++  ++ I  +VG+   A  IL +M   G++ D   +  L+  YGK+G   E  K+F
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             MK+  V  ++ +Y  L     + G Y  A   F +  S G+      Y+ ++     +
Sbjct: 503 AEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKN 562

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             + +A+   ++M   GIS +VVTYN++I+ + R   M+ +   ++         + +S 
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSAD-YSNGGSLPFSSSALSE 621

Query: 235 TTMIKGYVAV----------------------ERADDALRIFDEMKSFDVKPNAVTYTAL 272
            T  +G   +                      +     L +F +M   ++KPN VT++A+
Sbjct: 622 LTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAI 681

Query: 273 LPGLCDAGKMVEVQKVLREM 292
           L          +   +L E+
Sbjct: 682 LNACSRCNSFEDASMLLEEL 701



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 4/190 (2%)

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I +  R G+   AK   ++    G+      F +++ +    G  + A  V  SM E G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298

Query: 515 VKENLDLVAKILEALLMRG-HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           ++ NL     +++A    G   ++     D M ++   P+   F+SLL+V S  G   AA
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAA 358

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             L D    R    D+ SY  +LDA+   G+   A+ IL ++  K  + +  S   +I G
Sbjct: 359 RNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDG 418

Query: 631 LNQEGNTKQA 640
             + G   +A
Sbjct: 419 FAKAGRFDEA 428


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 228/496 (45%), Gaps = 16/496 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L     S  A + F  + + GL   D  T+  +++     G L     +L  M
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGL-EPDIATYCTLLQGYATKGALVEMHALLDLM 362

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G+  D  +F +LI +Y K+  V E++ +F  M+Q G+  +V +Y A+  ++ + G  
Sbjct: 363 VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A  YF +M+ EG+ P    Y  ++    +  K + A     +M  RGI L+ + +N++
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+ + +  ++ E+EKLF  M    ++P VI+Y+T+I GY    + D+A ++   M S  +
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           KP+ VTY  L+ G C   +M +   + +EMV   + P   +  + L G+   +    AA 
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF-HTRRTAAAK 601

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++   + +     E   Y I++   CK  + D A+++   L   +        L +E  +
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--------LQLETRT 653

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           +N MI  L   G+  +A+  F      G++ +   +  +      +G  +   ++   M 
Sbjct: 654 FNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSME 713

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
             G   D+     ++   L++GE   A T L SMI++ H    +   S+   L   G+ Q
Sbjct: 714 DNGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGKYQ 772

Query: 502 TASRVM----KSMVEK 513
              R +    KS +E 
Sbjct: 773 EYHRFLPEKYKSFIES 788



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 153/666 (22%), Positives = 277/666 (41%), Gaps = 70/666 (10%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           AG       T+  +I    R G+L+     L ++ KKG + +   F  L++         
Sbjct: 80  AGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTS 139

Query: 109 ESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE---GIEPTRHTY 164
           +++ I    M +L     V S   L K +    R   A    + M  +   G  P   +Y
Sbjct: 140 DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY 199

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
             ++ GFF     + A   + +M  R IS DVVTY+++I    + + MD+A ++   M +
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVK 259

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
             + P  ++Y +++ GY + E+  +A+    +M+S  V+P+ VTY +L+  LC  G+  E
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +K+   M +R + P D + +  LL      G L     +L  M+R  I  +   + ILI
Sbjct: 320 ARKIFDSMTKRGLEP-DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             + K E  D A+ +  K+         Q  L+    +Y  +I  LC +G    A ++F 
Sbjct: 379 CAYAKQEKVDEAMLVFSKM--------RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFE 430

Query: 405 QLMKKGV------------------------------------LDPVAFNNLIRGHSKEG 428
           Q++ +G+                                    L+ + FN++I  H KEG
Sbjct: 431 QMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEG 490

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
               + ++  +M R GV  +   Y  LI+ Y   G+  +A   L SM   G  P    + 
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           +++       R+  A  + K MV  GV  N+     IL+ L        A      + +S
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS 610

Query: 549 GS---VPNFDSLLSVLSEKGKTIAAVKLL-DFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
           G+   +  ++ +L  L +   T  A+++  + CL  D  ++  ++  ++ ALL  G+   
Sbjct: 611 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL-TDLQLETRTFNIMIGALLKVGRNDE 669

Query: 605 AYSILFKIMEKGGVTDW----------------KSSDKLIAGLNQEGNTKQADILSRMIR 648
           A  +       G V ++                +  D+L   +   G T  + +L+ ++R
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVR 729

Query: 649 GEMSRG 654
             + RG
Sbjct: 730 ELLQRG 735



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 226/494 (45%), Gaps = 15/494 (3%)

Query: 25  LVYN-VLHGAKNSEH---ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN +LHG  +SE    A+ F + +   G+   D  T+  +++ L + G+   AR I  
Sbjct: 267 MTYNSILHGYCSSEQPKEAIGFLKKMRSDGV-EPDVVTYNSLMDYLCKNGRSTEARKIFD 325

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M K+G++ D   +  L++ Y  KG + E   + D+M + G+      ++ L     ++ 
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A   F+KM   G+ P   TY  ++     S  ++ A+ +FE M   G++ +++ Y 
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 445

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++I+    F K D+AE+L  EM ++ I    I + ++I  +    R  ++ ++FD M   
Sbjct: 446 SLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            VKPN +TY+ L+ G C AGKM E  K+L  M    + P D   +  L+   C+   ++ 
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP-DCVTYNTLINGYCRVSRMDD 564

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  + K M+   +      Y I+++          A +L   +         +S   +E 
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT--------KSGTQLEL 616

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           S+YN ++  LC N  T +A   F+ L    + L+   FN +I    K G  D A ++   
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVA 676

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
               G+  +   Y  + E+ + +G   +      SM ++G +  S +   ++  L + G 
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 500 VQTASRVMKSMVEK 513
           +  A   +  + EK
Sbjct: 737 ITRAGTYLSMIDEK 750



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/538 (21%), Positives = 243/538 (45%), Gaps = 29/538 (5%)

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTY 164
           +++  +FD + + G   S+   +     + R        RY N+M   G   + PT HTY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTY 90

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA-EKLFAEMK 223
            +++     + +L+       ++  +G  ++ +T+  ++ G    K+  +A + +   M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEM---KSFDVKPNAVTYTALLPGLCDAG 280
           E +  P V S T ++KG     R+ +AL +   M   +     P+ V+YT ++ G    G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
              +      EM++R I P D   +  ++   CK   ++ A +VL  M++  +      Y
Sbjct: 211 DSDKAYSTYHEMLDRRISP-DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 341 GILIENFCKAEMYDRAIKLLDKL----VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
             ++  +C +E    AI  L K+    VE +++            +YN ++ +LC NG++
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVV------------TYNSLMDYLCKNGRS 317

Query: 397 GKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A   F  + K+G+   +A +  L++G++ +G       ++ +M R G+  D   +  L
Sbjct: 318 TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL 377

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I +Y ++ +  +A      M + G +P    + +V+  L + G V  A    + M+++G+
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             N+ +   ++ +L +    ++A   I  M+  G   N   F+S++    ++G+ I + K
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           L D  +      ++ +Y  ++D    AGK   A  +L  +   G   D  + + LI G
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLING 555


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 216/493 (43%), Gaps = 46/493 (9%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           KG+Q D     +LI  +   G +     +   + + G      + + L K +  +G+   
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  + +K+L++G +  + +Y  ++ G         AI+F   +  R    DVV YNT+I+
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID 207

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              +++ + EA  LF+EM  K I   V++Y T+I G+  V +  +A+ + +EM    + P
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N  TY  L+  LC  GK+ E + VL  M++  + P D   +  L+        +  A  V
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP-DVITYSTLMDGYFLVYEVKKAQHV 326

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
             AM  + +  +   Y ILI  FCK +M D A+ L  ++ +K ++               
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV--------------- 371

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           P I                           V +++LI G  K G     ++++  M  RG
Sbjct: 372 PGI---------------------------VTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
            P D   Y  LI+   + G    A    + M +    P    F  +++ L + GR++ A 
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
            V + ++ KG   N+     ++     +G +EEAL  +  M  +G +PN   F++++  L
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524

Query: 562 SEKGKTIAAVKLL 574
            +K +   A KLL
Sbjct: 525 FKKDENDKAEKLL 537



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 195/454 (42%), Gaps = 45/454 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I     +G++     +L  + K+G   D      LI+    KG V++++   D +   G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + +  SY  L   + + G    A ++  K+     +P    YN ++        +  A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT----------- 230
             F +M  +GIS DVVTYNT+I G+    K+ EA  L  EM  K I P            
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 231 ------------------------VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
                                   VI+Y+T++ GY  V     A  +F+ M    V P+ 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            TYT L+ G C    + E   + +EM ++ + P   + +  L+   CKSG ++   D++ 
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT-YSSLIDGLCKSGRISYVWDLID 398

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M     P +   Y  LI+  CK    DRAI L +K+ ++EI  RP         ++  +
Sbjct: 399 EMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI--RP------NIFTFTIL 450

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           +  LC  G+   A+  F+ L+ KG  L+   +N +I GH K+G  + A  ++  M   G 
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGC 510

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
             +A  +  +I +  +K E   A+  L  MI  G
Sbjct: 511 IPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 184/378 (48%), Gaps = 10/378 (2%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           ++  A++F R ++   L   D   +  +I+ + +   ++ A  +  +M  KG+  D   +
Sbjct: 179 DTRAAIKFLRKID-GRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTY 237

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             LI  +   G ++E++ + + M    +  +V +Y+ L   + + G+   AK     ML 
Sbjct: 238 NTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK 297

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
             ++P   TY+ ++ G+FL  +++ A   F  M   G++ DV TY  +ING+ + K +DE
Sbjct: 298 ACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDE 357

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A  LF EM +KN+ P +++Y+++I G     R      + DEM+      + +TY++L+ 
Sbjct: 358 ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLID 417

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GLC  G +     +  +M ++ I P +   F  LL   CK G L  A +V + ++     
Sbjct: 418 GLCKNGHLDRAIALFNKMKDQEIRP-NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                Y ++I   CK  + + A+ +L K+ +   I  P       A ++  +I  L    
Sbjct: 477 LNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCI--P------NAFTFETIIIALFKKD 528

Query: 395 QTGKAEIFFRQLMKKGVL 412
           +  KAE   RQ++ +G+L
Sbjct: 529 ENDKAEKLLRQMIARGLL 546



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/510 (21%), Positives = 222/510 (43%), Gaps = 16/510 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML     P    +N +L  F       TA+     ++ +GI  D++T N +IN +  
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++     + A++ ++   P  ++  T+IKG     +   AL   D++ +   + N V+
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 166

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ G+C  G      K LR++  R   P D  ++  ++   CK   ++ A  +   M
Sbjct: 167 YATLINGVCKIGDTRAAIKFLRKIDGRLTKP-DVVMYNTIIDAMCKYQLVSEAYGLFSEM 225

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               I  +   Y  LI  FC       AI LL+++V K        T++    +YN ++ 
Sbjct: 226 AVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK--------TINPNVYTYNILVD 277

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G+  +A+     ++K  V  D + ++ L+ G+        A  +   M   GV  
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  LI  + +     +A      M +    P    + S+++ L + GR+     ++
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
             M ++G   ++   + +++ L   GH++ A+   + M      PN   F  LL  L + 
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G+   A ++    L +   +++ +Y  +++     G    A ++L K+ + G + +  + 
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517

Query: 625 DKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           + +I  L ++    +A+   +++R  ++RG
Sbjct: 518 ETIIIALFKKDENDKAE---KLLRQMIARG 544



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/469 (21%), Positives = 191/469 (40%), Gaps = 29/469 (6%)

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
           + +D+A   F  M      P +I +  ++  +  ++    A+ +   ++   ++P+ +T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
             L+   C  G++     VL ++++R  PP D      L+   C  G +  A      ++
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPP-DTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
                     Y  LI   CK      AIK L K+  +  + +P   +      YN +I  
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGR--LTKPDVVM------YNTIIDA 208

Query: 390 LCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           +C      +A   F ++  KG+  D V +N LI G    G    A  ++  M  + +  +
Sbjct: 209 MCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPN 268

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  L+++  ++G+  +AK+ L  M++    P    + ++M+  F    V+ A  V  
Sbjct: 269 VYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFN 328

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKG 565
           +M   GV  ++     ++        V+EAL     M Q   VP    + SL+  L + G
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +      L+D    R    D+ +Y  ++D L   G    A ++  K+ ++    +  +  
Sbjct: 389 RISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFT 448

Query: 626 KLIAGLNQEGNTKQA-----DILSR-----------MIRGEMSRGSQKE 658
            L+ GL + G  K A     D+L++           MI G   +G  +E
Sbjct: 449 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497


>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 145/645 (22%), Positives = 267/645 (41%), Gaps = 68/645 (10%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDR--------- 56
           W+  ++ ++  L  + D  +V  VL G  +S  A++F+ W E    F H+          
Sbjct: 75  WSESVELELEGLHVELDPFVVNKVLRGLSDSGMAVRFYWWAESRPGFYHNNFAIAYIISL 134

Query: 57  ----ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
               +    ++E LGRV               +GV +   ++ VL+  Y + G     ++
Sbjct: 135 LFVDDNFALLLEFLGRV-------------RSQGVAFHRSLYRVLLAGYARAGKFDSVIE 181

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
            FD M   G       Y+    ++++   + + ++Y+N  L++G   T  TY+  +    
Sbjct: 182 TFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALC 241

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
            S ++E       DM   G   D    N  ++      ++ +A ++  +M  K   P V+
Sbjct: 242 QSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVV 301

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +YTT++       R  +A+ +++EM    +KP+ V   AL+ GLC   K+ E  ++   M
Sbjct: 302 TYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRM 361

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           +   I   + S++  L+    ++G +  A   +  M R     +   Y IL+ ++C   M
Sbjct: 362 LTLDI-QLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGM 420

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGV 411
            D+A  L+ K+          S ++ +  SYN +++ LC   Q  KA  F    M+  G 
Sbjct: 421 TDKAENLIRKM--------EMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGF 472

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D V+ N LI    +    +SA  + K MG +G+  DA  Y  LI      G    A+  
Sbjct: 473 CDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEEL 532

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            D M+     P  +++  ++ +L + G  + A ++   M +K V                
Sbjct: 533 FDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEV---------------- 576

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
                           S     F++L+  L +  + + A+ L      +    D  ++  
Sbjct: 577 ----------------SPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRY 620

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
           ++  LL  GK   AY I   +ME G + D   S++LI+ L  + N
Sbjct: 621 IISGLLDEGKATLAYEIWEYMMENGIILDRDVSERLISVLKLKNN 665


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 232/496 (46%), Gaps = 25/496 (5%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE----THLKMIEILGRVGKLNHARCIL 79
           N + ++L  A+ SE  +  FR +     F+ D +    ++  +++ L R GK++ A   +
Sbjct: 4   NALLDLLERARRSEQIVVVFRRI-----FSQDCKPNALSYCYLVKALCRTGKIDKACSTI 58

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M ++ +  D   + V+I++  K   +  +++ F+ M     E  V +Y+ L   + + 
Sbjct: 59  AEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKN 114

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           GR   A   F  M   GI P+  TY  ++  F    + ETA    + M SR  S  V +Y
Sbjct: 115 GRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSY 174

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            ++ING  + +K+D+A +LF EMK    +P  ++Y T+I G    +R  +A  +   M  
Sbjct: 175 CSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVE 234

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
              +P+ +T+TAL+ GLC   ++ E   + + M ++   P D      L+   C    L 
Sbjct: 235 NGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP-DLVTHTVLVSKLCILRKLR 293

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  V++     + P     Y  +     +   +DRA +LL K+  + +   P + +   
Sbjct: 294 PALSVVRNYP--ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGV---PPNVV--- 345

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +Y    + L    +  +A   FR+++++G+  D VA+N L+ G  K    D A ++V+
Sbjct: 346 --TYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVR 403

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M + G+P +   Y  L+  + RKG+       L +M+  G  P  + + +++  LF  G
Sbjct: 404 YMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVG 463

Query: 499 RVQTASRVMKSMVEKG 514
           +   A   +   + +G
Sbjct: 464 QADAAYSFLNLAMSQG 479



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 202/486 (41%), Gaps = 67/486 (13%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           ++A +T  +     LVP  F +N+V + L  A+    A++FF             ET   
Sbjct: 52  DKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFF-------------ET--- 95

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
                               MP+     D   +  L+    K G V ++  +F  M+  G
Sbjct: 96  --------------------MPEP----DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAG 131

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  S  +Y  L  +  +  ++  A      M S    PT ++Y  ++ G   + K++ A 
Sbjct: 132 ITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAY 191

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + FE+MK  G   D VTYNT+I+G    +++ EA+ L   M E   +P  I++T +I+G 
Sbjct: 192 QLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGL 251

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR------EMVER 295
              +R  +A  +F  M      P+ VT+T L+  LC   K+     V+R      E V  
Sbjct: 252 CTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVIL 311

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
           Y P        + LG   +    + AA +L+ M R  +P     Y    +     +   R
Sbjct: 312 YTP------IFRELG---RRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMR 362

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP- 414
           A +   +++E+ I   P    DM A  YN ++   C   +   AE   R + + G L P 
Sbjct: 363 AYREFRRMLEQGI--EP----DMVA--YNVLVDGFCKADRLDMAEKMVRYMDQSG-LPPN 413

Query: 415 -VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +N L+  H ++G  ++  E++  M  RG   D   +  L+      G+   A + L+
Sbjct: 414 IVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLN 473

Query: 474 SMIEDG 479
             +  G
Sbjct: 474 LAMSQG 479



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/476 (22%), Positives = 187/476 (39%), Gaps = 50/476 (10%)

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E  +  F  + S+    + ++Y  ++    R  K+D+A    AEM  + + P V +Y  +
Sbjct: 17  EQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVV 76

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I       R   A+  F+ M     +P+ VTY  LL GLC  G++ +   +   M    I
Sbjct: 77  IDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGI 132

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D + +  L+ V CK      A  +L+ M           Y  +I   CK    D+A 
Sbjct: 133 TPSDVT-YTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAY 191

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
           +L +++  K    +P         +YN +I  LC   +  +A+     +++ G   D + 
Sbjct: 192 QLFEEM--KLAGCKPDRV------TYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKIT 243

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE--SYLRKGEPA-------- 466
           F  LI G         AF + + M ++G   D   +  L+     LRK  PA        
Sbjct: 244 FTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYP 303

Query: 467 -----------------------DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
                                   A   L  M   G  P    + +  + L +      A
Sbjct: 304 ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRA 363

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
            R  + M+E+G++ ++     +++       ++ A   +  M QSG  PN   +++L+  
Sbjct: 364 YREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGH 423

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
              KGK  A  +LL   + R    D+A++  ++  L   G+   AYS L   M +G
Sbjct: 424 HCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 90/453 (19%), Positives = 173/453 (38%), Gaps = 51/453 (11%)

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VT N +++   R ++ ++   +F  +  ++ +P  +SY  ++K      + D A     E
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    + P+  TY  ++  LC A ++    +    M     P  D   +  LLG  CK+G
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM-----PEPDVVTYNTLLGGLCKNG 115

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            +  A  +  +M    I      Y  LI+ FCK   ++ A  LL  +  ++         
Sbjct: 116 RVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKC-------- 167

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEI 436
                  +P +   C                           ++I G  K    D A+++
Sbjct: 168 -------SPTVYSYC---------------------------SIINGLCKNRKVDQAYQL 193

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
            + M   G   D   Y  LI     K    +AK  L  M+E+G  P    F +++E L  
Sbjct: 194 FEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCT 253

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI-DLMMQSGSVPNFD 555
             R++ A  + + M ++G   +L     ++  L +   +  AL  + +      +V  + 
Sbjct: 254 TDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYT 313

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            +   L  +     A +LL     R    ++ +Y      L    + + AY    +++E+
Sbjct: 314 PIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ 373

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           G   D  + + L+ G  +     + D+  +M+R
Sbjct: 374 GIEPDMVAYNVLVDGFCK---ADRLDMAEKMVR 403


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/581 (23%), Positives = 262/581 (45%), Gaps = 16/581 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D+E +   + +L       +A  +L +M   G    E  F  +I +  K+G V E++++ 
Sbjct: 192 DQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLK 251

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M   G   ++    +L K    +G    A    N++   G+ P + TY+V++ G   +
Sbjct: 252 DDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKN 311

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A  F+ +MK++GI   V + N+++ GY + +    A  +F +  E  +   V ++
Sbjct: 312 GNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTF 370

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++       + ++A  ++DE+ +  + PN V+Y  ++ G C    +    KV +EM++
Sbjct: 371 NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD 430

Query: 295 RYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
               P  N+V F  L+    K G +  A  +   M   +I       GI+I+  CKA   
Sbjct: 431 NGFTP--NAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
                L +K V +  +  P          YN +I      G    A   +R++ + G+  
Sbjct: 489 FEGRDLFNKFVSQGFV--PTCM------PYNTIIDGFIKEGNINLASNVYREMCEVGITP 540

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             V + +LI G  K  N D A +++  M R+G+  D  AY  LI+ + ++ +   A   L
Sbjct: 541 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 600

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           + +   G SP   ++ S++        V+ A  + K MV +G+  +L     +++ LL  
Sbjct: 601 NELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKS 660

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G +  A      M+  G +P+      L++ L  KG+   A K+L+   G++ I  +  Y
Sbjct: 661 GRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIY 720

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
             ++      G    A+ +  +++++G V D  + D L+ G
Sbjct: 721 NTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 223/482 (46%), Gaps = 12/482 (2%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N   AL     +  +GL   ++ T+  +I+   + G +  A     +M  KG++      
Sbjct: 278 NLRSALVLVNEISESGLV-PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSL 336

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             ++E Y K    Q +  +F+   + G+  +V +++ L   + + G+   A   ++++++
Sbjct: 337 NSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIA 395

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
           +GI P   +YN ++ G      +  A + +++M   G + + VT+  +++GY +   ++ 
Sbjct: 396 KGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIEN 455

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A  +F  MK+ NI PT  +   +IKG     R+ +   +F++  S    P  + Y  ++ 
Sbjct: 456 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIID 515

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G    G +     V REM E  I P     +  L+   CK  +++ A  +L  M R  + 
Sbjct: 516 GFIKEGNINLASNVYREMCEVGITPS-TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 574

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   YG LI+ FCK      A +LL++L  +   L P   +      YN MI    +  
Sbjct: 575 MDIKAYGTLIDGFCKRRDMKSAHELLNEL--RGAGLSPNRFI------YNSMITGFKNMN 626

Query: 395 QTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
              +A   +++++ +G+  D   + +LI G  K G    A +I   M  +G+  D  A+ 
Sbjct: 627 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHT 686

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI     KG+  +A+  L+ M      P+  ++ +++   F++G +Q A R+   M+++
Sbjct: 687 VLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDR 746

Query: 514 GV 515
           G+
Sbjct: 747 GL 748



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 171/399 (42%), Gaps = 45/399 (11%)

Query: 65  ILGRVGKLN-HARC-ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           ILG   K N +A C +  +M   G   +   F +L++ Y KKG ++ +  IF  MK   +
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             +  +   + K + + GR    +  FNK +S+G  PT   YN ++ GF     +  A  
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            + +M   GI+   VTY ++I+G+ +   +D A KL  +MK K ++  + +Y T+I G+ 
Sbjct: 529 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                  A  + +E++   + PN   Y +++ G  +   + E   + ++MV   IP  D 
Sbjct: 589 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPC-DL 647

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +  L+    KSG L  A+D+   M+   I  +   + +LI   C    ++ A K+L+ 
Sbjct: 648 KTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE- 706

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIR 422
                         DM   +  P +                           + +N LI 
Sbjct: 707 --------------DMNGKNMIPSV---------------------------LIYNTLIA 725

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           GH KEGN   AF +   M  RG+  D   Y  L+    +
Sbjct: 726 GHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 764



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/472 (21%), Positives = 193/472 (40%), Gaps = 45/472 (9%)

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A + F   K+RG+ LD   Y+  ++          A  L  EM+     P   ++T++I 
Sbjct: 177 AEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVIT 236

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
             V      +ALR+ D+M +     N    T+L+ G C  G +     ++ E+ E  + P
Sbjct: 237 ACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVP 296

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            +   +  L+   CK+G++  A +    M    I +       ++E + K + +  A  +
Sbjct: 297 -NKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 355

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
            +  +E  +             ++N ++  LC  G+  +A   + +++ KG+  + V++N
Sbjct: 356 FNDALESGL---------ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 406

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           N+I GH ++ N ++A ++ K M   G   +A  +  L++ Y +KG+  +A +    M + 
Sbjct: 407 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 466

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
              P  +    +++ L + GR      +    V +G          I++  +  G++  A
Sbjct: 467 NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 526

Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLD-FCLGRDCIIDLASYEKVLDALL 597
                 M + G  P+             T+    L+D FC G +  IDLA          
Sbjct: 527 SNVYREMCEVGITPS-------------TVTYTSLIDGFCKGNN--IDLA---------- 561

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
                     +L  +  KG   D K+   LI G  +  + K A  L   +RG
Sbjct: 562 --------LKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRG 605



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 4/166 (2%)

Query: 10  LQNKIRA--LVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL 66
           L N++R   L P +F +N +        N E A+  ++ +   G+   D +T+  +I+ L
Sbjct: 599 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI-PCDLKTYTSLIDGL 657

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
            + G+L +A  I  +M  KG+  D+    VLI     KG  + + KI + M    +  SV
Sbjct: 658 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSV 717

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
             Y+ L     + G    A R  ++ML  G+ P   TY++++ G F
Sbjct: 718 LIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKF 763


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 128/556 (23%), Positives = 239/556 (42%), Gaps = 66/556 (11%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           F  L+    +  +   ++++F  M +      +  +Y+A+ + + RR     A RY + M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           +  G  P  +T+N ++ G+  + +++ A   F+ M  RG + DVV+Y T+I G     ++
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           DEA +LF EM     +P +  Y  ++KG    ER ++ L +   MK    +P+   Y A+
Sbjct: 240 DEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +   C   K  E +++L+EM E+ + P   +    ++   CK G ++ A  VL+ M    
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTC-TAVINAYCKEGRMSDALRVLELMKLRG 354

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKL---------VEKEIILRPQST-------- 375
                  Y  L++ FC      +A+ LL+K+         V   +++R Q          
Sbjct: 355 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 414

Query: 376 ----------LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
                     L  +  +YN +I  LC +G+T +A   F  L  +G+  + V FN+LI G 
Sbjct: 415 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 474

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K G  D A++ ++ M   G   D   Y   IE   +     +  + +  M++    P++
Sbjct: 475 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 534

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             +  V+  L ++      +R    MV  G   ++      + A  + G + EA      
Sbjct: 535 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA------ 588

Query: 545 MMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
                     +++L  +S+ G T                +D  +Y  ++D   + G+T +
Sbjct: 589 ----------ENVLMEMSKNGVT----------------VDTMAYNTLMDGHASIGQTDH 622

Query: 605 AYSILFKIMEKGGVTD 620
           A SIL ++     V +
Sbjct: 623 AVSILKQMTSVASVPN 638



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 234/527 (44%), Gaps = 21/527 (3%)

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIE-PTRHTYNVMLWGFFLSLKLETAIRFFE 185
           + + +L   + R     +A R F  M       PT  TYN ++        L  A+R+  
Sbjct: 118 RPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLS 177

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M   G   D  T+N++I GY R  ++D A  LF +M  +     V+SY T+I+G     
Sbjct: 178 LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAG 237

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           R D+A+ +F EM     +P+   Y AL+ GLC+A +  E   +LR M E    P   + +
Sbjct: 238 RIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRA-Y 292

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             ++  +C+      A ++L+ M    +         +I  +CK      A+++L+ +  
Sbjct: 293 AAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKL 352

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
           +    +P         +YN ++Q  C+ G+  KA     ++   GV  D V +N LIRG 
Sbjct: 353 RGC--KPN------VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 404

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
             +G+ +SAF ++++M   G+  D   Y  LI +  + G    A +  DS+   G  P +
Sbjct: 405 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 464

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             F S++  L + G+   A + ++ MV  G   +    +  +E L      +E L  I  
Sbjct: 465 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 524

Query: 545 MMQSGSVP---NFDSLL-SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           M+Q    P   N+  ++  +L E+   + A    +  +   C  D+ +Y   + A    G
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM-VSSGCNPDVVTYTTSMRAYCIEG 583

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           +   A ++L ++ + G   D  + + L+ G    G T  A  IL +M
Sbjct: 584 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 630



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 166/682 (24%), Positives = 279/682 (40%), Gaps = 71/682 (10%)

Query: 17  LVPQFDHNLVYNVLHGAKNS--EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           L P FD      + H ++ +    AL+ F  + R         T+  +I  L R   L  
Sbjct: 112 LRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLAR 171

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A   L  M + G + D   F  LI  Y +   V  +  +FD M   G  + V SY  L +
Sbjct: 172 ALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIE 231

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            +   GR   A   F +M     +P  H Y  ++ G   + + E  +     MK  G   
Sbjct: 232 GLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRP 287

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
               Y  +++   R +K  EAE++  EM EK + P V++ T +I  Y    R  DALR+ 
Sbjct: 288 STRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVL 347

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           + MK    KPN  TY AL+ G C+ GK+ +   +L +M    + P D   +  L+  QC 
Sbjct: 348 ELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNP-DAVTYNLLIRGQCI 406

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            GH+ +A  +L+ M    +  +   Y  LI   CK    D+A  L D L  + I  +P  
Sbjct: 407 DGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGI--KPN- 463

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG-----HSKEG 428
                A ++N +I  LC +G+   A  F  +++  G   D   +++ I        S+EG
Sbjct: 464 -----AVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 518

Query: 429 ------------NPDSA-FEIV--KIMGRR---------------GVPRDADAYICLIES 458
                        P +  + IV  K++  R               G   D   Y   + +
Sbjct: 519 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 578

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           Y  +G   +A+  L  M ++G +  +  + ++M+     G+   A  ++K M       N
Sbjct: 579 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 638

Query: 519 LDLVAKILEALLMRGHVEEAL-----------------GRIDLMMQSGSVPN---FDSLL 558
                 +L  L+    VE+ L                 G  D+M ++  +PN   + S+L
Sbjct: 639 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSIL 698

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
              SE G+T  A  L+         ++   Y  ++     + + L+A+ ++  +++ G +
Sbjct: 699 EGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFI 758

Query: 619 TDWKSSDKLIAGLNQEGNTKQA 640
               S   L++GL  EG T +A
Sbjct: 759 PQLMSYQHLLSGLICEGQTDKA 780



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 153/667 (22%), Positives = 271/667 (40%), Gaps = 97/667 (14%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V   L    +   AL++   + R+G +  D  T   +I    R  +++ AR +   M
Sbjct: 156 YNAVIRSLCRRADLARALRYLSLMVRSG-WRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 214

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIF------DI-------------------- 116
           P +G   D   +  LIE   + G + E+V++F      D+                    
Sbjct: 215 PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGL 274

Query: 117 -----MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
                MK+LG   S ++Y A+     R  +   A+    +M  +G+ P   T   ++  +
Sbjct: 275 LMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 334

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               ++  A+R  E MK RG   +V TYN ++ G+    K+ +A  L  +M+   + P  
Sbjct: 335 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDA 394

Query: 232 ISYTTMIKG----------------------------YVAV-------ERADDALRIFDE 256
           ++Y  +I+G                            Y A+        R D A  +FD 
Sbjct: 395 VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS 454

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           +++  +KPNAVT+ +L+ GLC +GK     K L +MV     P D   +   +   CK  
Sbjct: 455 LETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTP-DTYTYSSFIEHLCKMK 513

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
                   +  M++  +     +Y I+I    K   Y    +   ++V         S  
Sbjct: 514 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV--------SSGC 565

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
           + +  +Y   ++  C  G+  +AE    ++ K GV +D +A+N L+ GH+  G  D A  
Sbjct: 566 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 625

Query: 436 IVKIMGR-RGVPRDADAYIC--------LIESYL--------RKGEPADAKTALDSMIED 478
           I+K M     VP     +I         L+E  L        +  E  D     D M ++
Sbjct: 626 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 685

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
              P S  + S++E   EDGR + A+ ++  M E  +  N D+   ++          +A
Sbjct: 686 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDA 745

Query: 539 LGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
              +  M+Q G +P   ++  LLS L  +G+T  A ++      +D   D   ++ ++D 
Sbjct: 746 WVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDG 805

Query: 596 LLAAGKT 602
           L+  G +
Sbjct: 806 LIKKGHS 812



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 197/471 (41%), Gaps = 35/471 (7%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAK----NSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           L NK+RA     D  + YN+L   +    + E A +  R +E  GL   D+ T+  +I  
Sbjct: 381 LLNKMRACGVNPD-AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA-DQYTYNALINA 438

Query: 66  LGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           L + G+ + A C L D +  +G++ +   F  LI    K G    + K  + M   G   
Sbjct: 439 LCKDGRTDQA-CSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTP 497

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
              +Y +  + + +         +  +ML + ++P+   Y +++             R +
Sbjct: 498 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTW 557

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M S G + DVVTY T +  Y    +++EAE +  EM +  +    ++Y T++ G+ ++
Sbjct: 558 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI 617

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALL-----------------PGLCDAGKMVEVQK 287
            + D A+ I  +M S    PN  TY  LL                  G+  A ++ +V  
Sbjct: 618 GQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFG 677

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +   M +    P   +    L G   + G    A  ++  M   SI      Y  L+  F
Sbjct: 678 LFDVMKKNEFLPNSGTYSSILEGFS-EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCF 736

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQL 406
           CK++ Y  A  L+  +++   I  PQ        SY  ++  L   GQT KA EIF    
Sbjct: 737 CKSKRYLDAWVLVCSMIQHGFI--PQ------LMSYQHLLSGLICEGQTDKAKEIFMNSR 788

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
            K    D + +  +I G  K+G+ D + E++ ++ R         Y  L E
Sbjct: 789 WKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 839



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 123/275 (44%), Gaps = 8/275 (2%)

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
           A +YN +I+ LC      +A  +   +++ G   D   FN+LI G+ +    D A ++  
Sbjct: 153 APTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFD 212

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  RG  +D  +Y  LIE     G   +A      M +    P   ++ ++++ L    
Sbjct: 213 KMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAE 268

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL 558
           R +    +++ M E G + +    A +++        +EA   +  M + G  P   +  
Sbjct: 269 RGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCT 328

Query: 559 SVLS---EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +V++   ++G+   A+++L+    R C  ++ +Y  ++      GK   A ++L K+   
Sbjct: 329 AVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRAC 388

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           G   D  + + LI G   +G+ + A  L R++ G+
Sbjct: 389 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 423



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 56/281 (19%), Positives = 100/281 (35%), Gaps = 58/281 (20%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           N D  T+   +      G+LN A  +L++M K GV  D   +  L++ +   G    +V 
Sbjct: 566 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 625

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR--------------------YFNKM 152
           I   +KQ+    SV +    F L+    R  + +                      F+ M
Sbjct: 626 I---LKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 682

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK- 211
                 P   TY+ +L GF    + E A      MK   ISL+   Y  ++  + + K+ 
Sbjct: 683 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 742

Query: 212 ----------------------------------MDEAEKLFAEMKEKNIEPTVISYTTM 237
                                              D+A+++F   + K+  P  I +  +
Sbjct: 743 LDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVI 802

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           I G +    +D +  +   ++  + +P+  TY  L   L D
Sbjct: 803 IDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPD 843


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 167/703 (23%), Positives = 287/703 (40%), Gaps = 71/703 (10%)

Query: 14  IRALVPQFDHNL-VYNVLHGAKNSEHALQFFRWVER---AGLFNHDRETHLKMIEILGRV 69
           +RA  P    +L +YN+L  +    H   F  W+     A        T   +I  L   
Sbjct: 104 LRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCES 163

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV------------------ 111
              +HA  +   MP+KG   +E    +L+    + G+V++++                  
Sbjct: 164 RAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVVYN 223

Query: 112 ----------------KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
                           ++ + M +LGV   V ++++    + R G+ M A R F  M  +
Sbjct: 224 TLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMD 283

Query: 156 G----IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
                  P   T+N+ML GF     +  A    E MK  G    +  YN  + G  R  +
Sbjct: 284 AELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGE 343

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           + EA  +  EM  K IEP   +Y  M+ G        DA  + D M    V P+ V Y+ 
Sbjct: 344 LLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYST 403

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           LL G C  GK+ E + VL EM+     P +      LL    K G    A ++L+ M   
Sbjct: 404 LLHGYCSRGKVFEAKSVLHEMIRNGCQP-NTYTCNTLLHSLWKEGRTLEAEEMLQKMNEK 462

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS---------- 381
               +     I++   C+    D+A +++      E+     ++LD   S          
Sbjct: 463 CYQPDTVTCNIVVNGLCRNGELDKASEIV-----SEMWTNGPTSLDKGNSFASLINSIHN 517

Query: 382 ---------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPD 431
                    +Y  +I  LC  G+  +A+  F +++ K +  D V ++  I    K+G   
Sbjct: 518 VSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKIS 577

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           SAF ++K M R G  +    Y  LI       +  +     D M E G SP    + +++
Sbjct: 578 SAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNII 637

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA--LGRIDLMMQSG 549
             L E G+ + A  ++  M++KG+  N+     +++A       + A  L  + L +   
Sbjct: 638 TCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGR 697

Query: 550 SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
               +  + + L   G+   A +L +  L R   +    Y+ ++  L    +  +A S+L
Sbjct: 698 KEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLL 757

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS-RMIRGEM 651
           +K+++KG   D  S   +I GL++ GN +QAD L+ RM+  E+
Sbjct: 758 YKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELEL 800



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 111/500 (22%), Positives = 211/500 (42%), Gaps = 60/500 (12%)

Query: 177 LETAIRFFEDMKSR--GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           ++ AI  F+ ++++   +S  +  YN ++    R  +      L+++M    + P   ++
Sbjct: 94  VDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTF 153

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I         D AL++F++M      PN  T   L+ GLC AG           +V+
Sbjct: 154 NLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAG-----------LVK 202

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + +   +N                N +  +   ++          Y  L+  FC+ EM +
Sbjct: 203 QALELVNN----------------NNSCRIANRVV----------YNTLVSRFCREEMNN 236

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-- 412
            A +L++++ E  ++  P      +  ++N  I  LC  G+  +A   FR +     L  
Sbjct: 237 EAERLVERMNELGVL--P------DVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGL 288

Query: 413 ---DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
              + V FN +++G  K G    A  +V+ M + G     + Y   +   LR GE  +A+
Sbjct: 289 PRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEAR 348

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
             LD M+  G  P +  +  +M+ L  +  +  A  +M  M+  GV  +    + +L   
Sbjct: 349 LVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGY 408

Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI-ID 585
             RG V EA   +  M+++G  PN    ++LL  L ++G+T+ A ++L   +   C   D
Sbjct: 409 CSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQK-MNEKCYQPD 467

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD--KLIAGLNQEGNTKQADI- 642
             +   V++ L   G+   A  I+ ++   G  +  K +    LI  ++   N     I 
Sbjct: 468 TVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGIT 527

Query: 643 LSRMIRGEMSRGSQKEKKQK 662
            + +I G    G  +E K+K
Sbjct: 528 YTTLINGLCKVGRLEEAKKK 547


>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
          Length = 567

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 141/580 (24%), Positives = 257/580 (44%), Gaps = 94/580 (16%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGL----FNHDRETHLKMIEILGRVGKLNHAR-CI 78
           N+V  V++   N  HAL FF W          ++H    +  + ++L     L+H+   I
Sbjct: 56  NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVL-----LSHSLISI 110

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
              + K   +  +     LI++YG +G V+ ++  F   KQ+     + SY++L  +++R
Sbjct: 111 AASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170

Query: 139 RGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
                +A+ +F++++ E  + P   TY  M+ G+     +E A + F+ M    +  +++
Sbjct: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKE-KNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
            YNTMING+ +   M+ A  +F  M   ++  P  ++YTT+I GY      ++A +  +E
Sbjct: 228 AYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNE 287

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN-SVFMKLLGVQCKS 315
           M +   +PN +TY A++ GLC  G++ E + ++ +M  R    KDN S    +L   C  
Sbjct: 288 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--RLNGFKDNVSTHKSMLKGLCVV 345

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G  + A   L+ ++  ++  +   Y ++I  FCK    D AI LL ++  +   L+P   
Sbjct: 346 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG--LKPT-- 401

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
                 S+N + + L  NG+  +A +  +Q+ +   L + V++N +I G           
Sbjct: 402 ----VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG----------- 446

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
                             +C     + KG   D +  +D MI  GH+   +++  +++  
Sbjct: 447 ------------------LC-----MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 483

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF 554
            E+G V+   ++   MV K     L+                                +F
Sbjct: 484 CEEGNVENVMQIAHEMVTKKYVIGLE--------------------------------SF 511

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
             L+  L  KGK   A KL D C  R   +D+ SY +VLD
Sbjct: 512 SVLVKQLCAKGKVTEAEKLFDTC-SRCPAVDVDSYRRVLD 550



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/394 (21%), Positives = 184/394 (46%), Gaps = 12/394 (3%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + +N +  VL    + + A +FF  + +  +   D  T+  MI    ++G + +A+ +  
Sbjct: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD-IMKQLGVERSVKSYDALFKLILRR 139
            M    V+ +   +  +I  + KKG ++ +  +FD +M       +  +Y  L     ++
Sbjct: 219 VM---TVKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKK 275

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G    AK+  N+M++ G  P   TYN M++G  ++ +++ A      M+  G   +V T+
Sbjct: 276 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 335

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            +M+ G     K D+A      + E N+ P V SY  +I G+  + ++D+A+ +  EM++
Sbjct: 336 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 395

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             +KP   ++ A+   L + G++     +L++M +    P   S    + G+    G + 
Sbjct: 396 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 455

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
              D++  MIR     +   Y  L++ +C+    +  +++  ++V K+ ++  +      
Sbjct: 456 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLE------ 509

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
             S++ +++ LC  G+  +AE  F    +   +D
Sbjct: 510 --SFSVLVKQLCAKGKVTEAEKLFDTCSRCPAVD 541



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 145/304 (47%), Gaps = 19/304 (6%)

Query: 356 AIKLLDKL---VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           +IKL ++    + KE ++ P      + S+Y  MI+  C  G    A+  F  +  K  L
Sbjct: 173 SIKLAEEFFHQIVKENVVPP------DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL 226

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIM--GRRGVPRDADAYICLIESYLRKGEPADAKT 470
             +A+N +I G  K+G+ +SA  +   M  G   +P     Y  LI+ Y +KGE  +AK 
Sbjct: 227 --LAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHV-TYTTLIDGYCKKGELEEAKK 283

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            ++ M+  G  P    + +++  L  +GRV  A  +M  M   G K+N+     +L+ L 
Sbjct: 284 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 343

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
           + G  ++A+G +  +M++   P+   ++ +++   + GK+  A+ LL     R     + 
Sbjct: 344 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 403

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ--ADILSR 645
           S+  V   L+  G+   A  +L ++ +   + ++ S + +I GL       Q   D++ R
Sbjct: 404 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 463

Query: 646 MIRG 649
           MIR 
Sbjct: 464 MIRS 467



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/414 (20%), Positives = 165/414 (39%), Gaps = 15/414 (3%)

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           + +IK Y        A+  F + K  +      +Y +LL  L     +   ++   ++V+
Sbjct: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D S +  ++   CK G +  A  V   M   ++      Y  +I  FCK    +
Sbjct: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGDME 243

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            A  + D+++  E  L    T       Y  +I   C  G+  +A+    ++M +G   +
Sbjct: 244 SARLVFDRMMSGEDCLPNHVT-------YTTLIDGYCKKGELEEAKKCMNEMMNRGCRPN 296

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + +N +I G    G  D A  ++  M   G   +   +  +++     G+   A   L 
Sbjct: 297 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 356

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           +++E   +P    +  V+    + G+   A  ++K M  +G+K  +     +   L+  G
Sbjct: 357 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 416

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLS----EKGKTIAAVKLLDFCLGRDCIIDLASY 589
            ++ A+  +  M Q   +PNF S  +++      KG+      L+D  +     +D   Y
Sbjct: 417 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 476

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
             +L      G   N   I  +++ K  V   +S   L+  L  +G   +A+ L
Sbjct: 477 SCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKL 530


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 204/417 (48%), Gaps = 10/417 (2%)

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           ++++ +K  Q D   +  LI  + K   + ++ ++ D M+         +Y+ +   +  
Sbjct: 142 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 201

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           RG+  +A +  +++LS+  +PT  TY +++    L   ++ A++  ++M SRG+  D+ T
Sbjct: 202 RGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFT 261

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YNT+I G  +   +D A ++   ++ K  EP VISY  +++  +   + ++  ++  +M 
Sbjct: 262 YNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 321

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           S    PN VTY+ L+  LC  GK+ E   +L+ M E+ + P D   +  L+   C+ G L
Sbjct: 322 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP-DAYSYDPLIAAFCREGRL 380

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A + L+ MI      +  +Y  ++   CK    D+A+++  KL   E+   P S    
Sbjct: 381 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL--GEVGCSPNS---- 434

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
             SSYN M   L  +G   +A     +++  G+  D + +N++I    +EG  D AFE++
Sbjct: 435 --SSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELL 492

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
             M           Y  ++  + +     DA   LDSM+ +G  P  + +  ++E +
Sbjct: 493 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 216/486 (44%), Gaps = 12/486 (2%)

Query: 56  RETH-LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           R+T  LK+     R G    +  +L  M +KG   D  +   LI+ +     V ++V++ 
Sbjct: 84  RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM 143

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           +I+++ G +  V +Y+AL     +  R   A R  ++M S+   P   TYN+M+      
Sbjct: 144 EILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 202

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL+ A++  + + S      V+TY  +I        +DEA KL  EM  + ++P + +Y
Sbjct: 203 GKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 262

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I+G       D A  +   ++    +P+ ++Y  LL  L + GK  E +K++ +M  
Sbjct: 263 NTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 322

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P +   +  L+   C+ G +  A ++LK M    +  +A  Y  LI  FC+    D
Sbjct: 323 EKCDP-NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 381

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            AI+ L+ ++    +         +  +YN ++  LC NG+  +A   F +L + G   +
Sbjct: 382 VAIEFLETMISDGCL--------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 433

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
             ++N +       G+   A  ++  M   G+  D   Y  +I    R+G    A   L 
Sbjct: 434 SSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLV 493

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M      P+   +  V+    +  R++ A  V+ SMV  G + N      ++E +   G
Sbjct: 494 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAG 553

Query: 534 HVEEAL 539
           +  EA+
Sbjct: 554 YRAEAM 559



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 192/430 (44%), Gaps = 47/430 (10%)

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           E+  L   M  K   P VI  T +IKG+  +     A+R+ + ++ F  +P+   Y AL+
Sbjct: 103 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALI 161

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C   ++ +  +VL  M  +   P D   +  ++G  C  G L+ A  VL  ++  + 
Sbjct: 162 NGFCKMNRIDDATRVLDRMRSKDFSP-DTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNC 220

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y ILIE        D A+KLLD+++ +   L+P                     
Sbjct: 221 QPTVITYTILIEATMLEGGVDEALKLLDEMLSRG--LKP--------------------- 257

Query: 394 GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
                              D   +N +IRG  KEG  D AFE+++ +  +G   D  +Y 
Sbjct: 258 -------------------DMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYN 298

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            L+ + L +G+  + +  +  M  +   P    +  ++ +L  DG+++ A  ++K M EK
Sbjct: 299 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 358

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAA 570
           G+  +      ++ A    G ++ A+  ++ M+  G +P   N++++L+ L + GK   A
Sbjct: 359 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 418

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           +++        C  + +SY  +  AL ++G  + A  ++ +++  G   D  + + +I+ 
Sbjct: 419 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISC 478

Query: 631 LNQEGNTKQA 640
           L +EG   +A
Sbjct: 479 LCREGMVDKA 488



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 169/365 (46%), Gaps = 9/365 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +IE     G ++ A  +L +M  +G++ D   +  +I    K+G+V  + ++   +
Sbjct: 226 TYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNL 285

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           +  G E  V SY+ L + +L +G++   ++   KM SE  +P   TY++++       K+
Sbjct: 286 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 345

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A+   + MK +G++ D  +Y+ +I  + R  ++D A +    M      P +++Y T+
Sbjct: 346 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 405

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +       +AD AL IF ++      PN+ +Y  +   L  +G  +    ++ EMV   I
Sbjct: 406 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGI 465

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  ++   C+ G ++ A ++L  M           Y I++  FCKA   + AI
Sbjct: 466 DP-DEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 524

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
            +LD +V      RP  T      +Y  +I+ +   G   +A      L++   +   +F
Sbjct: 525 DVLDSMVGNGC--RPNET------TYTVLIEGIGFAGYRAEAMELANDLVRINAISEYSF 576

Query: 418 NNLIR 422
             L R
Sbjct: 577 KRLHR 581


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/563 (24%), Positives = 240/563 (42%), Gaps = 48/563 (8%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L+ + DH LV  V+         +QFFRW  +   + HD  T++ +I  
Sbjct: 73  WGPDAERALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHC 132

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDM-FEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           L  V +      ++ +M +  +     M    +I   G   ++ +++ IF  +K    + 
Sbjct: 133 LELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQP 192

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRF 183
           + ++Y+++  +++  G+Y      +N+M +EG  +P   TY+ ++  F    + ++AIR 
Sbjct: 193 TAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRL 252

Query: 184 FEDMKSRG-----------ISL------------------------DVVTYNTMINGYNR 208
             +MK  G           ISL                        DV TY  +I G  +
Sbjct: 253 LNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGK 312

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++DEA   + EM+ +  +P  +    MI       R DD L++F+EM      PN VT
Sbjct: 313 AGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVT 372

Query: 269 YTALLPGLCDA-GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           Y  ++  L ++  ++ EV      M    I P   +  + + G  CK+  +  A  +L+ 
Sbjct: 373 YNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGF-CKTNRIEKAMMLLEE 431

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M     P     Y  LI+   KA+ YD A +L  +L E        +     A  Y  MI
Sbjct: 432 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE--------NCGSSSARVYAVMI 483

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
           +HL   G+   A   F ++ K G    V A+N L+ G ++    D A   ++ M   G  
Sbjct: 484 KHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCL 543

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D ++Y  ++    + G P  A   L +M      P +  + +V+ +L   G  + A+ +
Sbjct: 544 PDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAEL 603

Query: 507 MKSMVEKGVKENLDLVAKILEAL 529
           MK M   G + +L   + ILEA+
Sbjct: 604 MKEMNALGFEYDLITYSSILEAI 626



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/465 (23%), Positives = 206/465 (44%), Gaps = 20/465 (4%)

Query: 1   MAERAWTTRLQNKIRALVP--QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRET 58
           M  +A T   Q K R   P  Q  ++++  ++H  +  E   + +  +   G    D  T
Sbjct: 174 MIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQ-YEKVHELYNEMSNEGHCQPDTVT 232

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I    ++G+ + A  +L +M + G+Q    ++ ++I  + K   V  ++ +F+ M+
Sbjct: 233 YSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMR 292

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
            +     V +Y  L + + + GR   A  ++++M  EG +P     N M+     + +L+
Sbjct: 293 YMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLD 352

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMING-YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             ++ FE+M       +VVTYNT+I   +    ++ E    F  MK   I P+  +Y+ +
Sbjct: 353 DGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSIL 412

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY- 296
           I G+    R + A+ + +EM      P    Y +L+  L  A +     ++ +E+ E   
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 472

Query: 297 -IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
               +  +V +K LG   K+G L+ A ++   M +L        Y  L+    +A M D 
Sbjct: 473 SSSARVYAVMIKHLG---KAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDE 529

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP- 414
           A+  + K+ E   +         + +SYN ++  L   G   +A       MK   + P 
Sbjct: 530 ALTTMRKMQEHGCLP--------DINSYNIILNGLAKTGGPHRAMEMLTN-MKNSTIKPD 580

Query: 415 -VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
            V++N ++   S  G  + A E++K M   G   D   Y  ++E+
Sbjct: 581 AVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 114/242 (47%), Gaps = 2/242 (0%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIE 64
           +W  R++    +  P F ++++ +        E A+     ++  G F      +  +I+
Sbjct: 392 SWFERMKGSGISPSP-FTYSILIDGFCKTNRIEKAMMLLEEMDEKG-FPPCPAAYCSLID 449

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
            LG+  + + A  +  ++ +        ++ V+I+  GK G + +++ +FD M +LG   
Sbjct: 450 ALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTP 509

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           +V +Y+AL   + R      A     KM   G  P  ++YN++L G   +     A+   
Sbjct: 510 NVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEML 569

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +MK+  I  D V+YNT+++  +     +EA +L  EM     E  +I+Y+++++    V
Sbjct: 570 TNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629

Query: 245 ER 246
           ++
Sbjct: 630 DQ 631


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 217/487 (44%), Gaps = 18/487 (3%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P    + V++ G     +L+ A    E     G   D VTYN  I+G  + +++D+A +L
Sbjct: 39  PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 98

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             +M EK   PT ++YT ++ G +   R D+A+ I ++M      P   TYT ++ GL  
Sbjct: 99  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSK 158

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR----LSIP 334
           AG++ E +++  +M+     P D  V+  L+    K G L+ A   L  M+       + 
Sbjct: 159 AGRVEEARRIFVDMLGNGCRP-DAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVE 217

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   + ++I   C +   + A+   D+L           +LD+   ++NP++  LC   
Sbjct: 218 PDVVIHNLVIRQLCASGNLEDALAYFDEL---------DDSLDLTHFTFNPLVAALCKAE 268

Query: 395 QTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +T +A  F +++ ++     +  + +L+ G  K G  D A   +K    RG   DA  Y 
Sbjct: 269 RTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYT 328

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            +I+   + G   +       M   G+ P +  + ++++   +   +  A RV + M++ 
Sbjct: 329 SIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQS 388

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G   +      IL+ L   G V EA      M + G V     + +L+     +G   AA
Sbjct: 389 GTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAA 448

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           V+L    L R C  +L SY  ++  L  AGK   AY    K++++    D  + +  + G
Sbjct: 449 VELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHG 508

Query: 631 LNQEGNT 637
           L Q  +T
Sbjct: 509 LCQRLDT 515



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 144/585 (24%), Positives = 259/585 (44%), Gaps = 27/585 (4%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            +V N L   K  + A        RAG    D  T+   I+ L +  +++ A  +L  M 
Sbjct: 45  TVVINGLCREKRLDEAFSVLERAVRAGC-EPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 103

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +K        +  L++   K G + E++ I + M + G   ++K+Y  +   + + GR  
Sbjct: 104 EKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 163

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM----KSRGISLDVVTY 199
            A+R F  ML  G  P    Y  ++ G     KL+ A+ +   M     +RG+  DVV +
Sbjct: 164 EARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIH 223

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N +I        +++A   F E+ + +++ T  ++  ++      ER ++A+    +M  
Sbjct: 224 NLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSE 282

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHL 318
               P   TYT+L+ G    G++ E    L+E VER +IP  D   +  ++   CK G +
Sbjct: 283 RRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIP--DAVTYTSIIDGLCKLGRV 340

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
               +    M       +A  Y  LI+ F KA+M  +A ++  +++        QS   +
Sbjct: 341 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQML--------QSGTVV 392

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIV 437
              +YN ++  LC  G+  +A   F  + ++G V   V ++ L+ G   EGN  +A E+ 
Sbjct: 393 STVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELF 452

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           + M  RG   +  +Y  +I    R G+ A A    + +++    P    F S +  L + 
Sbjct: 453 RRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ- 511

Query: 498 GRVQTAS---RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            R+ T      + +SMV +G   NL   + +++ +   G +E  L     M+  G  P+ 
Sbjct: 512 -RLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDV 570

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
             F++L+  L   G+   A+++    L R    D  SY  +LDAL
Sbjct: 571 VVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDAL 614



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 203/484 (41%), Gaps = 41/484 (8%)

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
             +L G   + +L+ A+   ++M     S D+V +  +ING  R K++DEA  +      
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMPC---SPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
              EP  ++Y   I G    ER DDA ++  +M      P  VTYTAL+ GL  AG++ E
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
              +L +MVE+   P   +  + + G+  K+G +  A  +   M+      +A  Y  LI
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLS-KAGRVEEARRIFVDMLGNGCRPDAFVYTALI 188

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
               K    D A+  L+++VE          ++ +   +N +I+ LC +G    A  +F 
Sbjct: 189 SGLAKIGKLDEALVYLNQMVENGC----ARGVEPDVVIHNLVIRQLCASGNLEDALAYFD 244

Query: 405 QLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +L     L    FN L+    K    + A   VK M  R        Y  L++ +L+ G 
Sbjct: 245 ELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGR 304

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +A   L   +E G  P +  + S+++ L + GRV+        M  +G + +    A 
Sbjct: 305 LDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 364

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
           +++  +    + +A      M+QSG+V                                +
Sbjct: 365 LIDGFMKAKMIPKAHRVYRQMLQSGTV--------------------------------V 392

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DIL 643
              +Y  +LD L  AG+   AY+    + E+G V    +   L+ G   EGN   A ++ 
Sbjct: 393 STVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELF 452

Query: 644 SRMI 647
            RM+
Sbjct: 453 RRML 456



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 184/407 (45%), Gaps = 16/407 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           HNLV   L  + N E AL +F  ++ +    H   T   ++  L +  +   A   +  M
Sbjct: 223 HNLVIRQLCASGNLEDALAYFDELDDSLDLTH--FTFNPLVAALCKAERTEEAIAFVKKM 280

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++        +  L++ + K G + E++       + G      +Y ++   + + GR 
Sbjct: 281 SERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRV 340

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                 F++M + G EP   TY  ++ GF  +  +  A R +  M   G  +  VTYN +
Sbjct: 341 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 400

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++G  +  ++ EA   F  M+E+    TV++Y+ ++ G+ +      A+ +F  M     
Sbjct: 401 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 460

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +PN V+Y  ++ GLC AGK+ +      ++++R + P D   F   L   C+   L+   
Sbjct: 461 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP-DVYTFNSFLHGLCQ--RLDTVG 517

Query: 323 D---VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           D   + ++M+          Y IL++  C+A   +  +++  ++V + +   P   +   
Sbjct: 518 DGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVA--PDVVV--- 572

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSK 426
              +N +I+ LC  G+  +A   FR+L ++   D  ++ +L+   S+
Sbjct: 573 ---FNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDALSR 616


>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 696

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 263/597 (44%), Gaps = 44/597 (7%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEH------ALQFFRWVERAGL-FN 53
           +AE  W  RL  +  A +P+     V   L  A   E        ++ + W  R G  F 
Sbjct: 56  LAEDDWFPRLNAEFAAALPRLGPRFVVRALRAAAEREGLGEPLLCVRLYVWASRFGAHFA 115

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
            D      ++  L R G +  +  ++ ++   G +  E++   L+ES+G+ G+ + + ++
Sbjct: 116 RDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEV 175

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           F  M +LG+  S   Y+AL    +R G    A   F +M ++G  P   TYN ++ G   
Sbjct: 176 FVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCR 235

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
              ++ A+R    M+  GI  +V TY  +++G+    +++EA ++  +MKEK + P+  +
Sbjct: 236 RGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEAT 295

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD-----------AGKM 282
           Y T++ G       D A R+  +    +        T+L P  C            A + 
Sbjct: 296 YRTLVHGVFRCLERDKAYRMLSDWLGHE--------TSLHPSACHTMLYCLSKKDMAKEA 347

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
           VE +K  R     Y+   D++ F  ++    K   ++   ++L + I+         Y +
Sbjct: 348 VEFEK--RMSARGYL--LDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIM 403

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           +I++    + + +A   L  +V K ++            SYN +I      G   KAE  
Sbjct: 404 VIKSLLNCKNFSKANHYLGHMVLKGLL--------SSVMSYNMVIDCFVKAGAVDKAEEI 455

Query: 403 FRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
            +++  KG L + V FN LI G+SK GN  +A  ++K++   G   D   +  LI+    
Sbjct: 456 VKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCN 515

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN-LD 520
             +  DA    + M E G  P +  +  +M +L   G V  A  ++  M   GV  +   
Sbjct: 516 THQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYS 575

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
             A IL    MR  V++A    + M++ G VP+   ++SL+  L ++ +   A ++L
Sbjct: 576 FNALILSFCRMR-KVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEIL 631



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 150/320 (46%), Gaps = 12/320 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  +G   D   F +++    K   V +  ++ D   + G       Y  + K +L    
Sbjct: 354 MSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKN 413

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           +  A  Y   M+ +G+  +  +YN+++  F  +  ++ A    ++M+ +G   ++VT+NT
Sbjct: 414 FSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNT 473

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+GY++   +  A+ +   + E    P +I++T++I G     + DDA   F+EM  + 
Sbjct: 474 LISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWG 533

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           V+PNA TY  L+  LC AG + +   +L +M    + P D   F  L+   C+   ++ A
Sbjct: 534 VRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTP-DAYSFNALILSFCRMRKVDKA 592

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL-RPQSTLDMEA 380
            D+   M+R  +  ++  Y  LI+  C     ++A         KEI+  R +S      
Sbjct: 593 EDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKA---------KEILFARERSGCSTSN 643

Query: 381 S-SYNPMIQHLCHNGQTGKA 399
           + SY P++  L   GQ  +A
Sbjct: 644 NQSYWPIVAALAKMGQFSEA 663



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/328 (21%), Positives = 136/328 (41%), Gaps = 41/328 (12%)

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
           L +   +  +  P+  L    + YN +I      G    A + F+Q+   G   D   +N
Sbjct: 168 LARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYN 227

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           +L+ G  + G  D A  +V+ M   G+  +   Y  L++ +   G   +A   LD M E 
Sbjct: 228 SLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEK 287

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVM------------------------KSMVEKG 514
           G +P+ + +R+++  +F       A R++                        K M ++ 
Sbjct: 288 GVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEA 347

Query: 515 VKENLDLVAK-----------ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL----S 559
           V+    + A+           ++   L    V +    +D  +++G  P FD  +    S
Sbjct: 348 VEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKS 407

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
           +L+ K  + A   L    L +  +  + SY  V+D  + AG    A  I+ ++ +KG + 
Sbjct: 408 LLNCKNFSKANHYLGHMVL-KGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLP 466

Query: 620 DWKSSDKLIAGLNQEGNTKQADILSRMI 647
           +  + + LI+G ++ GN   A ++ +M+
Sbjct: 467 NLVTFNTLISGYSKLGNVHNAKVVLKML 494


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/510 (23%), Positives = 236/510 (46%), Gaps = 11/510 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERA-GLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           F  N V      A + + AL   R + R+ G    D  ++  +I  L R GK + A  + 
Sbjct: 158 FAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVF 217

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M   GV  +   +  +I+ + K G ++   ++ D M   G + ++ +Y+ L   + R 
Sbjct: 218 DEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRA 277

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           GR    +   ++M S  + P   TY+++  G   + +  T +  F +   +G+ L   T 
Sbjct: 278 GRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTC 337

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + ++NG  +  K+ +AE++   +    + PT + Y T+I GY  V     A  IF++MKS
Sbjct: 338 SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 397

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             ++P+ +TY AL+ GLC    + + + ++ EM +  + P   + F  L+     +G L 
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET-FNTLIDAYGTAGQLE 456

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
               VL  M +  I ++   +G +++ FCK      A+ +LD ++ K++    Q      
Sbjct: 457 KCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ------ 510

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              YN +I     +G T +A +   ++   GV    V +N L++G  +    D A E++ 
Sbjct: 511 --VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            +  +G+  D  +Y  +I +   KG+   A   L  M + G  P    + +++ +L   G
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 628

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           RV     + + M+ K V+ +  +   +++A
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 235/532 (44%), Gaps = 50/532 (9%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+ S + L + +L  GR+   +  F  +++ G  P    +N ++     +  L+ A+   
Sbjct: 121 SLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMV 180

Query: 185 EDM-KSRGISL-DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
             M +S G    D  +YN +I G  R  K  +A K+F EM +  + P  I+Y TMI G+V
Sbjct: 181 RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHV 240

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                +   R+ D+M     KPN VTY  LL GLC AG+M E + ++ EM    + P   
Sbjct: 241 KGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGF 300

Query: 303 -------------------SVFMK---------------LLGVQCKSGHLNAAADVLKAM 328
                              S+F +               LL   CK G +  A  VL+ +
Sbjct: 301 TYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML 360

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +   +      Y  LI  +C+      A  + +++  + I  RP         +YN +I 
Sbjct: 361 VHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI--RPDHI------TYNALIN 412

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
            LC      KAE    ++ K GV DP    FN LI  +   G  +  F ++  M ++G+ 
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGV-DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 471

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D  ++  +++++ + G+  +A   LD MI    +P + ++ S++++  E G  + A  +
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 531

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           ++ M   GV  ++     +L+ L     ++EA   I  +   G  P+   +++++S    
Sbjct: 532 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           KG T  A++LL           L +Y  ++ AL +AG+  +   +  +++ K
Sbjct: 592 KGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 643



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 190/405 (46%), Gaps = 10/405 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L R G+++  R ++ +M    +  D   + +L +   + G  +  + +F   
Sbjct: 266 TYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 325

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + GV     +   L   + + G+   A++    ++  G+ PT   YN ++ G+     L
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 385

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A   FE MKSR I  D +TYN +ING  + + + +AE L  EM++  ++P+V ++ T+
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  Y    + +    +  +M+   +K + +++ +++   C  GK+ E   +L +M+ + +
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +  V+  ++    +SG    A  +++ M    +      Y +L++  C++   D A 
Sbjct: 506 AP-NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 564

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-A 416
           +L+  L  +   LRP      +  SYN +I   C+ G T KA    +++ K G+   +  
Sbjct: 565 ELIYTLRNQG--LRP------DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 616

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           ++ L+   +  G       + + M  + V   +  Y  ++++Y+R
Sbjct: 617 YHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/495 (21%), Positives = 199/495 (40%), Gaps = 44/495 (8%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P+  + N++L       +       F  + + G   D   +N ++        +D A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 219 FAEM--KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
              M   E    P   SY  +I G     +  DAL++FDEM    V PN +TY  ++ G 
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
              G + E    LR+ +    P  +   +  LL   C++G ++    ++  M   S+  +
Sbjct: 240 VKGGDL-EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y IL +   +       + L  + ++K ++L         A + + ++  LC +G+ 
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVML--------GAYTCSILLNGLCKDGKV 350

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            KAE     L+  G V   V +N LI G+ +  +   AF I + M  R +  D   Y  L
Sbjct: 351 AKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I    +      A+  +  M + G  P+   F +++++    G+++    V+  M +KG+
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLD 575
           K +                                V +F S++    + GK   AV +LD
Sbjct: 471 KSD--------------------------------VISFGSVVKAFCKNGKIPEAVAILD 498

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             + +D   +   Y  ++DA + +G T  A+ ++ K+   G      + + L+ GL +  
Sbjct: 499 DMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS 558

Query: 636 NTKQADILSRMIRGE 650
              +A+ L   +R +
Sbjct: 559 QIDEAEELIYTLRNQ 573



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 140/293 (47%), Gaps = 2/293 (0%)

Query: 11  QNKIRALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           Q K R + P    +N + N L   +    A      +E++G+ +   ET   +I+  G  
Sbjct: 394 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV-DPSVETFNTLIDAYGTA 452

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+L     +L DM +KG++ D   F  +++++ K G + E+V I D M    V  + + Y
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           +++    +  G    A     KM + G+  +  TYN++L G   S +++ A      +++
Sbjct: 513 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +G+  DVV+YNT+I+        D+A +L  EM +  I PT+ +Y T++    +  R  D
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 632

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              ++ +M   +V+P++  Y  ++          +V  + +EM E+ I   D 
Sbjct: 633 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 235/501 (46%), Gaps = 21/501 (4%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M ++G+  D+ MF V+IE + K   ++++V+I+  MK +G+  S      + +  L+   
Sbjct: 371 MEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAES 430

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL----KLETAIRFFEDMKSRGISLDVV 197
              A   FN      I      +  M    FL L    K++ A  F   M+++GI  +VV
Sbjct: 431 PEAALEIFNDSFETWI-----AHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVV 485

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            YN M+  + R K MD A  +F+EM EK ++P   +Y+ +I G+   +   +A  + ++M
Sbjct: 486 FYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQM 545

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            + + + N V Y  ++ GLC  G+  + +++L+ +++        + +  ++    K G 
Sbjct: 546 IASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGD 605

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
            ++A +  + M    I      +  LI  FCK+   D A++++ ++  K+        L 
Sbjct: 606 TDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKD--------LK 657

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEI 436
           ++  +Y  +I   C       A   F +L++ G++  V+ +NNLI G    G  D+A ++
Sbjct: 658 LDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDL 717

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
            K M   G+  D   Y  +I+  L+ G    A      ++  G  P   L+  ++  L +
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSK 777

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
            G+   AS++++ M +K    N+ + + ++      G++ EA    D M++ G V +   
Sbjct: 778 KGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTI 837

Query: 554 FDSLLSVLSEKGKTIAAVKLL 574
           F+ L+S   EK    A +  L
Sbjct: 838 FNLLVSGRVEKPPAAAKISSL 858



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 147/611 (24%), Positives = 277/611 (45%), Gaps = 33/611 (5%)

Query: 34  KNSEHALQFFRWVERAG------LFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGV 87
           +  E A++ FR V   G      LF+   +   KM +++  +  L   R       K GV
Sbjct: 253 RKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMR------EKGGV 306

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
              ++ +  +I +  K+G ++E+VK+ D M   G+  SV +  +L            A  
Sbjct: 307 PASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALD 366

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           +FN+M  EG+ P +  ++VM+  F  ++++E A+  ++ MKS GI+   V  + MI G  
Sbjct: 367 FFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCL 426

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV----ERADDALRIFDEMKSFDVK 263
           + +  + A ++F +  E     T I++  M      +     + D A      M++  ++
Sbjct: 427 KAESPEAALEIFNDSFE-----TWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIE 481

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           PN V Y  ++   C    M   + +  EM+E+ + P +N  +  L+    K+     A +
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQP-NNFTYSILIDGFFKNQDEQNAWE 540

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V+  MI  +       Y  +I   CK     +A ++L  L++       +    M  +SY
Sbjct: 541 VINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK-------EKRYSMGCTSY 593

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I      G T  A   +R++ + G+  + V F +LI G  K    D A E++  M  
Sbjct: 594 NSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKS 653

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           + +  D  AY  LI+ + +K +   A T    ++E G  P  S++ +++      G++  
Sbjct: 654 KDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDA 713

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A  + K MV  G+  +L     +++ LL  G++  A      ++  G VP+   +  L++
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVN 773

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            LS+KG+ + A K+L+    +D   ++  Y  V+      G    A+ +  +++EKG V 
Sbjct: 774 GLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVH 833

Query: 620 DWKSSDKLIAG 630
           D    + L++G
Sbjct: 834 DDTIFNLLVSG 844



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 141/656 (21%), Positives = 278/656 (42%), Gaps = 39/656 (5%)

Query: 26  VYNVLHGAKNSE-HALQFFRWV-------ERAGLF------------NHDRETHLKMIEI 65
           V  VL G +N    ALQ+  WV       E   +F             HDR ++L ++ +
Sbjct: 82  VIEVLLGRRNDPVSALQYCNWVKPLRSLCEGGDVFWVLIHILFSSPHTHDRASNLLVMFV 141

Query: 66  LGRVGKLNHARCI-LLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
                 +  A    L+D  K+   +     F  L+ +Y +   +  +V  F++M    V 
Sbjct: 142 SSNPTLIPSAMVNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVV 201

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
             V   + +   ++R      AK  +NKM+  G+     T  +++       K E A++ 
Sbjct: 202 PFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKI 261

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP-TVISYTTMIKGYV 242
           F  + SRG   D + ++  +    + K +  A  L  EM+EK   P +  +YT++I   V
Sbjct: 262 FRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACV 321

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                ++A+++ DEM  F +  + +  T+L+ G C+  ++ +       M E  + P D 
Sbjct: 322 KEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAP-DK 380

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
            +F  ++   CK+  +  A ++ K M  + I   +     +I+   KAE  + A+++ + 
Sbjct: 381 VMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFND 440

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-NNLI 421
             E  I               N +   LC  G+   A  F R +  KG+   V F NN++
Sbjct: 441 SFETWI---------AHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMM 491

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
             H +  N D A  I   M  +G+  +   Y  LI+ + +  +  +A   ++ MI     
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFE 551

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMV-EKGVKENLDLVAKILEALLMRGHVEEALG 540
               ++ +++  L + G+   A  ++++++ EK           I++     G  + A+ 
Sbjct: 552 ANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVE 611

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
               M ++G  PN   F SL++   +  +   A++++     +D  +D+ +Y  ++D   
Sbjct: 612 AYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFC 671

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMS 652
                  AY++  +++E G + +    + LI+G    G    A D+  +M+   +S
Sbjct: 672 KKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGIS 727



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 192/443 (43%), Gaps = 59/443 (13%)

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYG-----------KKGIVQESVKIFDIMKQLGVERS 125
           C+  + P+  ++   D FE  I ++G           K+G V  +     +M+  G+E +
Sbjct: 425 CLKAESPEAALEIFNDSFETWI-AHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPN 483

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V  Y+ +     R     +A+  F++ML +G++P   TY++++ GFF +   + A     
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVIN 543

Query: 186 DMKSRGISLDVVTYNTMING-----------------------------YNR-----FKK 211
            M +     + V YNT+ING                             YN      FK+
Sbjct: 544 QMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKE 603

Query: 212 --MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
              D A + + EM E  I P V+++T++I G+    R D AL +  EMKS D+K +   Y
Sbjct: 604 GDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAY 663

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
            AL+ G C    M     +  E++E  + P + SV+  L+      G ++AA D+ K M+
Sbjct: 664 GALIDGFCKKNDMKTAYTLFSELLELGLMP-NVSVYNNLISGFRNLGKMDAAIDLYKKMV 722

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
              I  +   Y  +I+   K      A  L  +L+   I+  P   L      Y  ++  
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIV--PDEIL------YVVLVNG 774

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           L   GQ  +A     ++ KK     V  ++ +I GH +EGN + AF +   M  +G+  D
Sbjct: 775 LSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHD 834

Query: 449 ADAYICLIESYLRKGEPADAKTA 471
              +  L+   + K  PA AK +
Sbjct: 835 DTIFNLLVSGRVEK-PPAAAKIS 856



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/199 (20%), Positives = 96/199 (48%), Gaps = 2/199 (1%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  +I+   +   +  A  +  ++ + G+  +  ++  LI  +   G +  ++ ++
Sbjct: 659 DVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLY 718

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G+   + +Y  +   +L+ G  ++A   ++++L+ GI P    Y V++ G    
Sbjct: 719 KKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKK 778

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +   A +  E+MK +  + +V+ Y+T+I G++R   ++EA ++  EM EK +      +
Sbjct: 779 GQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIF 838

Query: 235 TTMIKGYVAVERADDALRI 253
             ++ G   VE+   A +I
Sbjct: 839 NLLVSG--RVEKPPAAAKI 855


>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 143/632 (22%), Positives = 265/632 (41%), Gaps = 42/632 (6%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W+  ++ ++  L  + D  +V  VL G  +S  A++F+ W E    F H+      +I +
Sbjct: 75  WSESVELELEGLHVELDPFVVNKVLRGLLDSGMAVRFYWWAESRPGFYHNNFAIAYIISL 134

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L            L  +  +GV +   ++ VL+  Y + G     ++ FD M   G    
Sbjct: 135 LFVDDNFALLSEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREF 194

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
              Y+    ++++   + + ++Y+N  L++G   T  TY+  +     S ++E       
Sbjct: 195 GVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLT 254

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           DM   G   D    N  ++      ++ +A ++  +M  K   P V++YTT++       
Sbjct: 255 DMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHR 314

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           R  +A+ +++EM    +KP+ V   AL+ GLC   K+ E  ++   M+   I   + S++
Sbjct: 315 RFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDI-QLNVSIY 373

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             L+    ++G +  A   +  M R     +   Y IL+ ++C   M D+A  L+ K+  
Sbjct: 374 NALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKM-- 431

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGH 424
                   S ++ +  SYN +++ LC   Q  KA  F    M+  G  D V+ N LI   
Sbjct: 432 ------EMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAF 485

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            +    +SA  + K MG +G+  DA  Y  LI      G    A+   D M+     P  
Sbjct: 486 CRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNV 545

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
           +++  ++ +L + G  + A ++   M +K V                             
Sbjct: 546 NVYNIMLHNLCKVGHFKHAQKIFWQMTQKEV----------------------------- 576

Query: 545 MMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
              S     F++L+  L +  + + A+ L      +    D  ++  ++  LL  GK   
Sbjct: 577 ---SPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATL 633

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
           AY I   +ME G + D   S++LI+ L  + N
Sbjct: 634 AYEIWEYMMENGIILDRDVSERLISVLKLKNN 665


>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 533

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 230/482 (47%), Gaps = 28/482 (5%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGL-FNHDRETHLKM 62
           + W  RL          F   LV +++   +N + ALQ F +  ++   F H+ +T+  +
Sbjct: 39  KPWPQRL----------FPKRLV-SMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSI 87

Query: 63  IEILGRVGKLNHARCILLDMPKK--GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +  L R    +    ++ D+      ++  E++F  L+ +YG  G  + S++IF  +   
Sbjct: 88  LFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDF 147

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYF-NKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           GV+RSV+S + L  ++++  R+ +    F N   S GI P   T N+++        +E+
Sbjct: 148 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 207

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A +  +++ + G+  ++VTY T++ GY     M+ A+++  EM ++   P  I+YT ++ 
Sbjct: 208 AYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMD 267

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY  + R  +A  + D+M+  +++PN VTY  ++  LC   K  E + +  EM++R   P
Sbjct: 268 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMP 327

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D+S+  K++   C+   ++ A  + + M++ +   +      LI   CK      A KL
Sbjct: 328 -DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKL 386

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-- 417
            D+  +  I     S L     +YN +I  +C  G+  +A   +  + ++    P AF  
Sbjct: 387 FDEFDKGSI----PSLL-----TYNTLIAGMCEKGELTEAGRLWDDMFERKC-KPNAFTY 436

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI G SK GN      +++ M   G   +   ++ L E   + G+  DA   +   + 
Sbjct: 437 NVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVM 496

Query: 478 DG 479
           +G
Sbjct: 497 NG 498



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 178/387 (45%), Gaps = 12/387 (3%)

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK- 225
           +L  + L+ + E+++R F  +   G+   V + NT++N   + ++ D    +F   KE  
Sbjct: 124 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 183

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I P + +   ++K        + A ++ DE+ +  + PN VTYT +L G    G M   
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESA 243

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           ++VL EM++R   P D   +  L+   CK G  + AA V+  M +  I      YG++I 
Sbjct: 244 KRVLEEMLDRGWYP-DAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 302

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CK +    A  + D+++++  +  P S+L  +      +I  LC + +  +A   +R+
Sbjct: 303 ALCKEKKSGEARNMFDEMLDRSFM--PDSSLCCK------VIDALCEDHKVDEACGLWRK 354

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           ++K   + D    + LI    KEG    A ++     +  +P     Y  LI     KGE
Sbjct: 355 MLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGSIP-SLLTYNTLIAGMCEKGE 413

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +A    D M E    P +  +  ++E L ++G V+   RV++ M+E G   N      
Sbjct: 414 LTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLI 473

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSV 551
           + E L   G  E+A+  + + + +G V
Sbjct: 474 LFEGLQKLGKEEDAIKIVSMAVMNGKV 500



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 93/459 (20%), Positives = 190/459 (41%), Gaps = 56/459 (12%)

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS----YTTMIKGYVAVER 246
           G + +  TY++++   +R +  D  E L A+++  N  P +      +  +++ Y    R
Sbjct: 76  GFTHNYDTYHSILFKLSRARAFDPVESLMADLR--NSYPPIKCGENLFIDLLRNYGLAGR 133

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY-IPPKDNSVF 305
            + ++RIF  +  F VK +  +   LL  L    +   V  + +   E + I P   ++F
Sbjct: 134 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITP---NIF 190

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
                  C                            +L++  CK    + A K+LD++  
Sbjct: 191 ------TC---------------------------NLLVKALCKKNDIESAYKVLDEI-- 215

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
                 P   L     +Y  ++      G    A+    +++ +G   D + +  L+ G+
Sbjct: 216 ------PAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGY 269

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K G    A  ++  M +  +  +   Y  +I +  ++ +  +A+   D M++    P S
Sbjct: 270 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDS 329

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
           SL   V+++L ED +V  A  + + M++     +  L++ ++  L   G V EA    D 
Sbjct: 330 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFD- 388

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
               GS+P+   +++L++ + EKG+   A +L D    R C  +  +Y  +++ L   G 
Sbjct: 389 EFDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGN 448

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
                 +L +++E G   +  +   L  GL + G  + A
Sbjct: 449 VKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDA 487



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 111/265 (41%), Gaps = 27/265 (10%)

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRR--GVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           L+   +++ N D A +I    G+   G   + D Y     S L K   A A   ++S++ 
Sbjct: 50  LVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTY----HSILFKLSRARAFDPVESLMA 105

Query: 478 D---GHSP---ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           D    + P     +LF  ++ +    GR +++ R+   + + GVK ++  +  +L  L+ 
Sbjct: 106 DLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQ 165

Query: 532 RGHVEEALGRIDLMMQS-GSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
               +          +S G  PN    + L+  L +K    +A K+LD       + +L 
Sbjct: 166 NQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLV 225

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL---- 643
           +Y  +L   +A G   +A  +L +++++G   D  +   L+ G  + G   +A  +    
Sbjct: 226 TYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDM 285

Query: 644 -------SRMIRGEMSRGSQKEKKQ 661
                  + +  G M R   KEKK 
Sbjct: 286 EKNEIEPNEVTYGVMIRALCKEKKS 310


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/497 (22%), Positives = 226/497 (45%), Gaps = 33/497 (6%)

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
           + ML  G +P+  TY V+L     S     A+   ++M+++G + ++VTYN +ING  R 
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
            ++D+A+++   +     +P ++SYTT++KG  A  R DD   +F EM      PN VT+
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
             L+   C  G +    +VL++M +    P + ++   ++   CK G ++ A D L  M 
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTP-NTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE---------------------- 367
                 +   Y  ++   C+A  ++ A +LL ++V K                       
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 368 -----IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIR 422
                I L P+    +   +YN ++   C  G+   A   F  L  +   + + +  L+ 
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEP--NTITYTTLLT 472

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G       D+A E++  M ++  P +A  +  L+  + +KG   +A   ++ M+E G +P
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               F ++++ + +D   + A  ++  +V KGV  +    + +++ L      EEA+  +
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 592

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             +   G  P    ++ +L  L ++ +T  A+    + +   C+ + ++Y  +++ L   
Sbjct: 593 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 652

Query: 600 GKTLNAYSILFKIMEKG 616
           G    A  +L ++  KG
Sbjct: 653 GLLKEARYVLSELYAKG 669



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/474 (22%), Positives = 212/474 (44%), Gaps = 15/474 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M ++G Q     + VL+E+  K     E++ + D M+  G   ++ +Y+ +   + R GR
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              AK   N++ S G +P   +Y  +L G   + + +     F +M  +    + VT++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++  + R   ++ A ++  +M +    P       +I       R DDA    + M  + 
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             P+ ++YT +L GLC AG+    +++L EMV +  PP + + F   + + C+ G +  A
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT-FNTFICILCQKGLIEQA 416

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL-VEKEIILRPQSTLDMEA 380
             +++ M           Y  L+  FC     D A++L + L  E   I           
Sbjct: 417 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTI----------- 465

Query: 381 SSYNPMIQHLCHNGQ-TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y  ++  LCH  +    AE+    + K   L+ V FN L+    ++G  + A E+V  
Sbjct: 466 -TYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 524

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G   +   +  L++   +     +A   L  ++  G S  +  + SV++ L  + R
Sbjct: 525 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 584

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            + A +++ ++ + G++  + +  KIL AL  R   ++A+     M+ +G +PN
Sbjct: 585 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPN 638



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/484 (22%), Positives = 212/484 (43%), Gaps = 17/484 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++E + +      A  +L +M  KG   +   + V+I    ++G V ++ +I + +
Sbjct: 189 TYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRL 248

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G +  + SY  + K +    R+   K  F +M+ +   P   T+++++  F     +
Sbjct: 249 SSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMV 308

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E AI+  + M   G + +    N +IN   +  ++D+A      M      P  ISYTT+
Sbjct: 309 ERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTV 368

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           ++G     R + A  +  EM   +  PN VT+   +  LC  G ++E    L E++  Y 
Sbjct: 369 LRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG-LIEQAIKLIELMPEYG 427

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG--HYGILIENFCKAEMYDR 355
                  +  L+   C  G +++A ++       ++P E     Y  L+   C AE  D 
Sbjct: 428 CSVGIVTYNALVHGFCVQGRVDSALELFN-----NLPCEPNTITYTTLLTGLCHAERLDA 482

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A +LL ++++K+  L         A ++N ++   C  G   +A     Q+M+ G   + 
Sbjct: 483 AAELLAEMIQKDCPLN--------AVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           + FN L+ G +K+ N + A E++  +  +GV  D   Y  +++   R+    +A   L +
Sbjct: 535 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 594

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           + + G  P   ++  ++ +L +      A      MV  G   N      ++E L   G 
Sbjct: 595 VQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGL 654

Query: 535 VEEA 538
           ++EA
Sbjct: 655 LKEA 658



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/429 (21%), Positives = 186/429 (43%), Gaps = 13/429 (3%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  ++  +++ L    + +  + +  +M  K    +E  F++L+  + + G+V+ ++
Sbjct: 253 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAI 312

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           ++   M Q G   +    + +   I ++GR   A  + N M   G  P   +Y  +L G 
Sbjct: 313 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGL 372

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + + E A     +M  +    + VT+NT I    +   +++A KL   M E      +
Sbjct: 373 CRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGI 432

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++Y  ++ G+    R D AL +F+ +     +PN +TYT LL GLC A ++    ++L E
Sbjct: 433 VTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAE 489

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M+++   P +   F  L+   C+ G +  A +++  M+          +  L++   K  
Sbjct: 490 MIQKDC-PLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 548

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             + A++LL  LV K +         ++  +Y+ ++  L    +T +A      +   G+
Sbjct: 549 NSEEALELLHGLVSKGV--------SLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGM 600

Query: 412 LDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
              V  +N ++    K    D A +    M   G   +   YI LIE    +G   +A+ 
Sbjct: 601 RPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARY 660

Query: 471 ALDSMIEDG 479
            L  +   G
Sbjct: 661 VLSELYAKG 669



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/461 (22%), Positives = 200/461 (43%), Gaps = 57/461 (12%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M  RG    VVTY  ++    +     EA  +  EM+ K   P +++Y  +I G     R
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            DDA  I + + S+  +P+ V+YT +L GLC A +  +V+ +  EMV++           
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK----------- 286

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
                +C                   +P E   + +L+  FC+  M +RAI++L ++ + 
Sbjct: 287 -----KC-------------------VPNEV-TFDMLVRFFCRGGMVERAIQVLQQMSQH 321

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHS 425
                P +TL       N +I  +C  G+   A  F   +   G   D +++  ++RG  
Sbjct: 322 GCT--PNTTL------CNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLC 373

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDA---DAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           + G  + A E++  M R+  P +    + +IC++    +KG    A   ++ M E G S 
Sbjct: 374 RAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL---CQKGLIEQAIKLIELMPEYGCSV 430

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               + +++      GRV +A  +  ++     + N      +L  L     ++ A   +
Sbjct: 431 GIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELL 487

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             M+Q     N   F+ L+S   +KG    A++L++  +   C  +L ++  +LD +   
Sbjct: 488 AEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKD 547

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             +  A  +L  ++ KG   D  +   ++  L++E  T++A
Sbjct: 548 CNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEA 588



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 165/380 (43%), Gaps = 35/380 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++    R G +  A  +L  M + G   +  +  ++I +  K+G V ++    + M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
                 SY  + + + R GR+  AK    +M+ +   P   T+N  +        +E AI
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +  E M   G S+ +VTYN +++G+    ++D A +LF  +     EP  I+YTT++ G 
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGL 474

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              ER D A  +  EM   D   NAVT+  L+   C  G + E  +++ +M+E    P +
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP-N 533

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  LL    K  +   A ++L  ++   +  +   Y  +++   + +  + AI++L 
Sbjct: 534 LITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLH 593

Query: 362 KLVEKEIILRPQ------------------STLDMEA-----------SSYNPMIQHLCH 392
            +  +++ +RP+                    +D  A           S+Y  +I+ L H
Sbjct: 594 AV--QDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAH 651

Query: 393 NGQTGKAEIFFRQLMKKGVL 412
            G   +A     +L  KGVL
Sbjct: 652 EGLLKEARYVLSELYAKGVL 671



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 166/370 (44%), Gaps = 6/370 (1%)

Query: 1   MAERAWTTRLQNKIRALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
           M ERA     Q       P     N+V N +      + A  F   +   G  N D  ++
Sbjct: 307 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC-NPDTISY 365

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             ++  L R G+  HA+ +L +M +K    +E  F   I    +KG++++++K+ ++M +
Sbjct: 366 TTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPE 425

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G    + +Y+AL      +GR   A   FN +     EP   TY  +L G   + +L+ 
Sbjct: 426 YGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDA 482

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A     +M  +   L+ VT+N +++ + +   ++EA +L  +M E    P +I++ T++ 
Sbjct: 483 AAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLD 542

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G      +++AL +   + S  V  + +TY++++  L    +  E  ++L  + +  + P
Sbjct: 543 GITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRP 602

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
           K   ++ K+L   CK    + A D    M+          Y ILIE      +   A  +
Sbjct: 603 K-VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYV 661

Query: 360 LDKLVEKEII 369
           L +L  K ++
Sbjct: 662 LSELYAKGVL 671



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/436 (19%), Positives = 187/436 (42%), Gaps = 48/436 (11%)

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
           + M ++  +P+V++YT +++         +A+ + DEM++    PN VTY  ++ G+C  
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
           G++ + +++L  +      P                       D++              
Sbjct: 236 GRVDDAKEILNRLSSYGFQP-----------------------DIVS------------- 259

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  +++  C A  +D    L  ++V+K+ +   + T DM       +++  C  G   +A
Sbjct: 260 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPN-EVTFDM-------LVRFFCRGGMVERA 311

Query: 400 EIFFRQLMKKGVLDPVAFNNL-IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
               +Q+ + G        N+ I    K+G  D A++ +  MG  G   D  +Y  ++  
Sbjct: 312 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 371

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             R G    AK  L  M+     P    F + +  L + G ++ A ++++ M E G    
Sbjct: 372 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 431

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCL 578
           +     ++    ++G V+ AL   + +    +   + +LL+ L    +  AA +LL   +
Sbjct: 432 IVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMI 491

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
            +DC ++  ++  ++      G    A  ++ ++ME G   +  + + L+ G+ ++ N++
Sbjct: 492 QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 551

Query: 639 QADILSRMIRGEMSRG 654
           +A     ++ G +S+G
Sbjct: 552 EA---LELLHGLVSKG 564


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 239/516 (46%), Gaps = 26/516 (5%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F V+I    ++  + E+  + +   + G E    +Y+     + +  R   A +   KM 
Sbjct: 10  FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +   PT  TY  ++ G   + +L+ A+   E M  +G S  + TY  +I+G ++  +++
Sbjct: 70  EKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 129

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS----FDVKPNAVTY 269
           EA ++F +M      P    YT +IKG     + ++A  ++ E  +        P+ VTY
Sbjct: 130 EARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTY 189

Query: 270 TALLPGLCDAGKMVEVQKVL-REMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           T+L+ GLC AG+++E ++V   E VER +IP  D   +  ++   CK G +    +    
Sbjct: 190 TSLIDGLCKAGRILEARQVFDDEAVERGFIP--DAVTYTSIIDGLCKLGRVEEGCERFHE 247

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M       +A  Y  LI+ F KA+M  +A ++  +++        QS   +   +YN ++
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQML--------QSGTVVSTVTYNIIL 299

Query: 388 QHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             LC  G+  +A   F  + ++G V   V ++ L+ G   EGN  +A E+ + M  RG  
Sbjct: 300 DGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE 359

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS-- 504
            +  +Y  +I    R G+ A A    + +++    P    F + +  L +  R+ T S  
Sbjct: 360 PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ--RLDTVSDG 417

Query: 505 -RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             + +SMV +G   NL   + +++ +   G +E AL     M+  G  P+   F++L+  
Sbjct: 418 VELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRW 477

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
           L   G+   A+++    L R    D  SY  +LD L
Sbjct: 478 LCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDGL 512



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 236/526 (44%), Gaps = 23/526 (4%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R  +L+ A  +L    + G + D   + V I+   K   V ++ ++   M +  
Sbjct: 13  VINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 72

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +  +Y AL   +L+ GR   A     +M+ +G  PT  TY V++ G   + ++E A 
Sbjct: 73  CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEAR 132

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK----NIEPTVISYTTM 237
           R F DM   G   D   Y  +I G  +  K +EA  L+ E   +       P V++YT++
Sbjct: 133 RIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSL 192

Query: 238 IKGYVAVERADDALRIF-DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           I G     R  +A ++F DE       P+AVTYT+++ GLC  G++ E  +   EM  R 
Sbjct: 193 IDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 252

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
             P D   +  L+    K+  +  A  V + M++         Y I+++  CKA     A
Sbjct: 253 YEP-DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 311

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
                 + E+  +            +Y+ ++   C  G    A   FR+++ +G  +P  
Sbjct: 312 YATFLAMEERGCV--------ATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC-EPNL 362

Query: 415 VAFNNLIRGHSKEGNPDSA-FEIVKIMGRRGVPRDADAYICLIESYLRKGEP-ADAKTAL 472
           V++N +IRG  + G    A F   K++ RR  P D   +   +    ++ +  +D     
Sbjct: 363 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP-DVYTFNAFLHGLCQRLDTVSDGVELF 421

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           +SM+  G SP    +  +M+ +   G ++ A  + + MV +GV  ++ +   ++  L + 
Sbjct: 422 ESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIA 481

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSVLS--EKGKTIAAVKLLDF 576
           G V+EAL  +   ++  S P+  S  S+L    + + +   +LL F
Sbjct: 482 GRVDEAL-EVFRELERRSAPDAWSYWSLLDGLSRCERMEEARLLSF 526



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 193/448 (43%), Gaps = 39/448 (8%)

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
            S D+V +  +ING  R K++DEA  +         EP  ++Y   I G    ER DDA 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           ++  +M      P  VTYTAL+ GL  AG++ E   VL +MVE+   P   +  + + G+
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
             K+G +  A  +   M+      +A  Y  LI+  CK+   + A  L  +   +    +
Sbjct: 123 S-KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANAR----K 177

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
             +T   +  +Y  +I  LC  G+  +A ++F  + +++G + D V + ++I G  K G 
Sbjct: 178 HHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGR 237

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            +   E    M  RG   DA  Y  LI+ +++      A      M++ G   ++  +  
Sbjct: 238 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 297

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           +++ L + GRV  A     +M E+G                                   
Sbjct: 298 ILDGLCKAGRVAEAYATFLAMEERGC--------------------------------VA 325

Query: 550 SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +V  + +L+     +G   AAV+L    L R C  +L SY  ++  L  AGK   AY   
Sbjct: 326 TVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYF 385

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
            K++++    D  + +  + GL Q  +T
Sbjct: 386 EKLLQRRLCPDVYTFNAFLHGLCQRLDT 413



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 221/493 (44%), Gaps = 21/493 (4%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P    + V++ G     +L+ A    E     G   D VTYN  I+G  + +++D+A +L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             +M EK   PT ++YT ++ G +   R D+A+ + ++M      P   TYT ++ GL  
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK-AMIR----LSI 333
           AG++ E +++  +M+     P D  V+  L+   CKSG    A  + K A  R     ++
Sbjct: 125 AGRVEEARRIFVDMLGNGCRP-DAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLL-DKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           P +   Y  LI+  CKA     A ++  D+ VE+  I         +A +Y  +I  LC 
Sbjct: 184 P-DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFI--------PDAVTYTSIIDGLCK 234

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+  +    F ++  +G   D V +  LI G  K      A  + + M + G       
Sbjct: 235 LGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 294

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  +++   + G  A+A     +M E G       + ++M+    +G V  A  + + M+
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 354

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           ++G + NL     I+  L   G + +A    + ++Q    P+   F++ L  L ++  T+
Sbjct: 355 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTV 414

Query: 569 A-AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
           +  V+L +  + +    +L SY  ++D +  AG    A  I  +++ +G   D    + L
Sbjct: 415 SDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTL 474

Query: 628 IAGLNQEGNTKQA 640
           I  L   G   +A
Sbjct: 475 IRWLCIAGRVDEA 487



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 151/312 (48%), Gaps = 5/312 (1%)

Query: 46  VERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKG 105
           VER   F  D  T+  +I+ L ++G++        +M  +G + D   +  LI+ + K  
Sbjct: 214 VERG--FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAK 271

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
           ++ ++ +++  M Q G   S  +Y+ +   + + GR   A   F  M   G   T  TY+
Sbjct: 272 MIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYS 331

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
            ++ GF     +  A+  F  M  RG   ++V+YN +I G  R  K+ +A   F ++ ++
Sbjct: 332 ALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 391

Query: 226 NIEPTVISYTTMIKGYVA-VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
            + P V ++   + G    ++   D + +F+ M S    PN  +Y+ L+ G+C AG +  
Sbjct: 392 RLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEV 451

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             ++ REMV R + P D  VF  L+   C +G ++ A +V + + R S P +A  Y  L+
Sbjct: 452 ALEIFREMVSRGVAP-DVVVFNTLIRWLCIAGRVDEALEVFRELERRSAP-DAWSYWSLL 509

Query: 345 ENFCKAEMYDRA 356
           +   + E  + A
Sbjct: 510 DGLSRCERMEEA 521


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 146/637 (22%), Positives = 291/637 (45%), Gaps = 60/637 (9%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           ++ +L   K+ + AL  F    R   + H     L ++  L     + H   I+  +  +
Sbjct: 13  LFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQ 72

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALF----------- 133
             +  ED+   ++++Y K  +  E++  F  M+++ G +  ++SY+AL            
Sbjct: 73  KCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEK 132

Query: 134 ------------------------KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
                                   K+ +++ +++ AK   + M S+ ++P  ++Y  ++ 
Sbjct: 133 AESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVIN 192

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD--EAEKLFAEM-KEKN 226
           G   S  L +A+  F++M  RG+  DV+ YN MI+G+  FK+ D  + ++++  + K   
Sbjct: 193 GMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGF--FKRGDYVQGKEIWERLVKGSC 250

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           + P V++Y  MI G   + R D++L +++ MK  + + +  TY++L+ GLCD G +    
Sbjct: 251 VYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAV 310

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           +V +EMV+R +     + +  LL   C++G +  + ++   M + +       Y I I  
Sbjct: 311 EVYKEMVKRSVVVDVVT-YNALLNGFCRAGKIKESFELWVMMGKENCHNVVS-YNIFIRG 368

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
             +    + AI +       E++ R  S  D  +++Y  +I  LC NG   KA    ++ 
Sbjct: 369 LFENRKVEEAISVW------ELLRRRGSGAD--STTYGVLIHGLCKNGHLNKALKILKEA 420

Query: 407 MKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC--LIESYLRKG 463
              G  LD  A+++++ G SK+G  D A  IV  M + G   +   ++C  LI  ++R  
Sbjct: 421 KDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGC--ELSPHVCNPLINGFVRAS 478

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           +  +A      M   G SP    + +++  L +  R   A   +K M+EK  K ++   +
Sbjct: 479 KLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYS 538

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGR 580
            +++ L     ++ AL     ++  G  P+    + L+  L   GK   A+ L       
Sbjct: 539 LLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQS 598

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +C+ +L ++  ++D L  A +     S+++  M K G
Sbjct: 599 NCLPNLVTHNTLMDGLYKA-RECEMASVIWACMFKNG 634



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 127/538 (23%), Positives = 242/538 (44%), Gaps = 19/538 (3%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G+  +   + +LI+   KK    E+  + D M    ++  V SY  +   +++ G  + A
Sbjct: 144 GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSA 203

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMIN 204
              F++M   G+ P    YN+M+ GFF           +E + K   +  +VVTYN MIN
Sbjct: 204 LEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMIN 263

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G  +  + DE+ +++  MK+   E  + +Y+++I G   V   D A+ ++ EM    V  
Sbjct: 264 GLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVV 323

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           + VTY ALL G C AGK+ E  ++   M  E        ++F++ L    ++  +  A  
Sbjct: 324 DVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLF---ENRKVEEAIS 380

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V + + R     ++  YG+LI   CK    ++A+K+L +               ++A +Y
Sbjct: 381 VWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKE--------AKDGGDKLDAFAY 432

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           + ++  L   G+  +A     Q+ K G  L P   N LI G  +    + A    + M  
Sbjct: 433 SSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMET 492

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           +G      +Y  LI    +    +DA + +  M+E    P    +  +M+ L +  ++  
Sbjct: 493 KGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDM 552

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLS 559
           A  + + ++ KG++ ++ +   ++  L   G +E+AL     M QS  +PN    ++L+ 
Sbjct: 553 ALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMD 612

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCI-IDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
            L  K +      ++  C+ ++    D+ SY   L  L + G+  +  ++    ++ G
Sbjct: 613 GLY-KARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNG 669



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 138/286 (48%), Gaps = 1/286 (0%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           ++G   D   + VLI    K G + +++KI    K  G +    +Y ++   + ++GR  
Sbjct: 387 RRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVD 446

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A    ++M   G E + H  N ++ GF  + KLE AI FF +M+++G S  VV+YNT+I
Sbjct: 447 EALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLI 506

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG  + ++  +A     EM EK+ +P +I+Y+ ++ G    ++ D AL ++ ++    ++
Sbjct: 507 NGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLE 566

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+   +  L+ GLC AGK+ +   +   M +    P   +    + G+  K+     A+ 
Sbjct: 567 PDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLY-KARECEMASV 625

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
           +   M +     +   Y I ++  C        I L D  ++  I+
Sbjct: 626 IWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGIL 671



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 8/324 (2%)

Query: 23  HNLV-YNV----LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           HN+V YN+    L   +  E A+  +  + R G    D  T+  +I  L + G LN A  
Sbjct: 357 HNVVSYNIFIRGLFENRKVEEAISVWELLRRRG-SGADSTTYGVLIHGLCKNGHLNKALK 415

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           IL +    G + D   +  +++   K+G V E++ I   M + G E S    + L    +
Sbjct: 416 ILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFV 475

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R  +   A  +F +M ++G  PT  +YN ++ G   + +   A  F ++M  +    D++
Sbjct: 476 RASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMI 535

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TY+ +++G  + KK+D A  L+ ++  K +EP V  +  ++ G  +  + +DAL ++  M
Sbjct: 536 TYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNM 595

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           K  +  PN VT+  L+ GL  A +      +   M +    P   S  + L G+ C  G 
Sbjct: 596 KQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGL-CSCGR 654

Query: 318 LNAAADVLKAMIRLSI-PTEAGHY 340
           ++    +    ++  I PT    Y
Sbjct: 655 ISDGIALFDDALKNGILPTSITWY 678



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 163/376 (43%), Gaps = 11/376 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++    R GK+  +  + + M K+    +   + + I    +   V+E++ +++++
Sbjct: 327 TYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELL 385

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ++ G      +Y  L   + + G    A +   +    G +     Y+ ++ G     ++
Sbjct: 386 RRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRV 445

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+     M   G  L     N +ING+ R  K++EA   F EM+ K   PTV+SY T+
Sbjct: 446 DEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTL 505

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G    ER  DA     EM   D KP+ +TY+ L+ GLC   K+     + R+++ + +
Sbjct: 506 INGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL 565

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D ++   L+   C +G +  A  +   M + +       +  L++   KA   + A 
Sbjct: 566 EP-DVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMAS 624

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            +   +         ++    +  SYN  ++ LC  G+       F   +K G+L   + 
Sbjct: 625 VIWACMF--------KNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSIT 676

Query: 417 FNNLIRGHSKEGNPDS 432
           +  L+R   K G  DS
Sbjct: 677 WYILVRAVLKLGPLDS 692



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/234 (19%), Positives = 103/234 (44%), Gaps = 6/234 (2%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           L P   + L+   +  +K  E A+ FFR +E  G  +    ++  +I  L +  + + A 
Sbjct: 462 LSPHVCNPLINGFVRASK-LEEAICFFREMETKGC-SPTVVSYNTLINGLCKAERFSDAY 519

Query: 77  CILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
             + +M +K   W  DM  + +L++   +   +  ++ ++  +   G+E  V  ++ L  
Sbjct: 520 SFVKEMLEK--DWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMH 577

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            +   G+   A   ++ M      P   T+N ++ G + + + E A   +  M   G   
Sbjct: 578 GLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQP 637

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           D+++YN  + G     ++ +   LF +  +  I PT I++  +++  + +   D
Sbjct: 638 DIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/201 (18%), Positives = 93/201 (46%), Gaps = 4/201 (1%)

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  +   Y  LI+  ++K +  +AK  LD M      P    + +V+  + + G + +A
Sbjct: 144 GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSA 203

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV-PN---FDSLLS 559
             V   M E+G+  ++     +++    RG   +     + +++   V PN   ++ +++
Sbjct: 204 LEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMIN 263

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            L + G+   ++++ +     +C +DL +Y  ++  L   G    A  +  +++++  V 
Sbjct: 264 GLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVV 323

Query: 620 DWKSSDKLIAGLNQEGNTKQA 640
           D  + + L+ G  + G  K++
Sbjct: 324 DVVTYNALLNGFCRAGKIKES 344


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 142/623 (22%), Positives = 267/623 (42%), Gaps = 50/623 (8%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAG-LFNHDRETH 59
           ++   W   L ++ +A     + + V +VL   +N  + L+F+ WV     LF  D+   
Sbjct: 91  LSRHDWFLLLNHEFKAKRITLNSHSVASVLQNQENPLYPLKFYIWVSNMDPLFAKDQSVK 150

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             +   L R G +  +  +L D+   G + +E++  +LI S+G+ G+ +   +IF  +  
Sbjct: 151 GVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISF 210

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           LG+  S + Y+A+   +++     +A   F +M ++  +P R TYN+++ G   S  ++ 
Sbjct: 211 LGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDE 270

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+R  + M+  G S +V TY  +I+G+   KK+DEA ++   MK + + P+  +  + I 
Sbjct: 271 ALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIH 330

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G           R     K+F++                A + +E + VL+ +       
Sbjct: 331 G---------VFRCVAPNKAFEL----------------AIEFIEREPVLQRLACD---- 361

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
                   LL           A  +LK   ++    ++  + I +    K    +    +
Sbjct: 362 -------TLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNI 414

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFN 418
           LD+ VE+         +    S+Y  +I+ L   G+  +   +F Q++K G+L  V ++N
Sbjct: 415 LDRFVEQ--------GMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYN 466

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            +I    K    D A    K M  +G+P +   +  LI+ Y + GE   ++  L  ++E 
Sbjct: 467 MVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEH 526

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P    F S+++ L    +++ A      MV  G+  N      ++ +L + G V  +
Sbjct: 527 GFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRS 586

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           +  +  M   G  P+   F++L+      GK   A KL    L    I D  +Y   +  
Sbjct: 587 MKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKV 646

Query: 596 LLAAGKTLNAYSILFKIMEKGGV 618
              +G+  N    LF  ME  G 
Sbjct: 647 FCQSGR-FNEAKELFLSMEANGC 668



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 112/233 (48%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   +   ++ A     +M  KG+  +   F  LI+ Y K G + +S  +  ++ + G
Sbjct: 468 VIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHG 527

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            +  + ++ ++   + R  +   A   F++M+  G+ P   TYN+++    +   +  ++
Sbjct: 528 FKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSM 587

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +    M++ GI+ DV ++N +I  + R  K+++A+KLF+ M    + P   +Y   IK +
Sbjct: 588 KLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVF 647

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
               R ++A  +F  M++    P++ T   +L  L    +    QK+ +   E
Sbjct: 648 CQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSE 700



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 80/176 (45%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T   +I+ L R  ++  A     +M   G+  +   + +LI S    G V  S+
Sbjct: 528 FKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSM 587

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K+   M+  G+   V S++AL +   R G+   AK+ F+ MLS G+ P  +TY   +  F
Sbjct: 588 KLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVF 647

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
             S +   A   F  M++ G   D  T N +++   +  + + A+K+     E  I
Sbjct: 648 CQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGI 703


>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 957

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 144/581 (24%), Positives = 252/581 (43%), Gaps = 32/581 (5%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  MI +  + G+   A   L +M + G   DE ++  +I  YGK G+ +E+ KIF  M
Sbjct: 284 TYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKEM 343

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
             LG+    KSY ++ K+    GR+  A + F+ M  +G+  TR T+N +L  F     +
Sbjct: 344 DTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDV 403

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A + + DM   G S +VVTY  MIN Y++F+ +++AE L AEM+E  ++P    Y + 
Sbjct: 404 EQATKVYNDMVEAG-SANVVTYGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSF 462

Query: 238 IKGYVAVERADDALRIFDEMK------------------SFDVKPNAVTYTALLPGLCDA 279
           +K Y   +  D A  +  EMK                  +     +      LL    +A
Sbjct: 463 VKLYCNSDMIDKATMVVQEMKDDGLESVCNEREMFPLGQALQSPIDTQILNQLLIKRAEA 522

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
           G++ E + +L ++VE      D +  + ++ +  + G    A  +  ++ +   P     
Sbjct: 523 GELREAELLLDKLVEAGGCIVDTAAVL-MINLYGRRGLFQKAKSLFNSLQKKDHPPSLYV 581

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  +I+     +  + AI + D++ E   +         +A + + ++      G+   A
Sbjct: 582 YNTMIKLCAVCKELEEAIFVFDRMEENGRMF--------DAVTVSILVHAYTKEGRFKDA 633

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
               ++  K GV +D VA+N  ++ + K GN   A E+   M    +   A  Y  LI  
Sbjct: 634 AGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISL 693

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           + + G+   A  A + +           +  ++      GR + A+ + + M  KG K N
Sbjct: 694 FSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPN 753

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
             +   +L+A    G   EA   +  M + G  P+   +  L+S    KGK   A  LL 
Sbjct: 754 EVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLH 813

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
               R    D   Y +V+ A    GK  +A  I +++   G
Sbjct: 814 LMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVG 854



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 132/636 (20%), Positives = 259/636 (40%), Gaps = 36/636 (5%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
           VL   +    A +FF W++    ++     +  ++ I G+ GKL  A   L +M   GV+
Sbjct: 80  VLKEQRGWRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVE 139

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            DE     ++E+Y +       ++ ++ M+Q G+  S   Y  +   + +  R+  A   
Sbjct: 140 PDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALML 199

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           +  +L E +EP    Y +++       + E A+  F+DM++ G   D + YNT+I    +
Sbjct: 200 WEDLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGK 259

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             +  E+E L+ +MK++ I P+  +YT MI  +    R   A     EM+      + V 
Sbjct: 260 LGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVV 319

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y +++     AG   E +K+ +EM    +   + S +  +  V+ ++G    A  +   M
Sbjct: 320 YCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKS-YTSMAKVRAEAGRHAEALKLFDVM 378

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               + T    +  L+  F +    ++A K+ + +VE                +Y  MI 
Sbjct: 379 AEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAG---------SANVVTYGNMIN 429

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV-- 445
                     AE    ++ + GV  D   + + ++ +      D A  +V+ M   G+  
Sbjct: 430 LYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLES 489

Query: 446 ----------------PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
                           P D      L+      GE  +A+  LD ++E G     +    
Sbjct: 490 VCNEREMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCIVDTAAVL 549

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++      G  Q A  +  S+ +K    +L +   +++   +   +EEA+   D M ++G
Sbjct: 550 MINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENG 609

Query: 550 SVPNFDS-----LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            +  FD+     L+   +++G+   A  L+         +D  +Y   L A L +G    
Sbjct: 610 RM--FDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKG 667

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           A  +  ++ E       K+   LI+  ++ G+  +A
Sbjct: 668 ALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRA 703



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 123/538 (22%), Positives = 223/538 (41%), Gaps = 30/538 (5%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           A     AL+ F  +   GL    R T   ++    R+G +  A  +  DM + G   +  
Sbjct: 365 AGRHAEALKLFDVMAEKGLLT-TRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSA-NVV 422

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            +  +I  Y K  +V+++  +   M++ GV+     Y +  KL         A     +M
Sbjct: 423 TYGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEM 482

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAI--------------RFFEDMKSRGISLDVVT 198
             +G+E   +   +   G  L   ++T I              R  E +  + +      
Sbjct: 483 KDDGLESVCNEREMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCI 542

Query: 199 YNT----MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            +T    MIN Y R     +A+ LF  +++K+  P++  Y TMIK     +  ++A+ +F
Sbjct: 543 VDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVF 602

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           D M+      +AVT + L+      G+  +   +++   ++     D   +   L    K
Sbjct: 603 DRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKR-AKKVGVAMDTVAYNTSLKANLK 661

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           SG+L  A +V   M    I   A  Y ILI  F K     RA++  + L   E+      
Sbjct: 662 SGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEV------ 715

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
               +  +Y+ MI      G+  +A   F+++  KG   + V +NNL+   ++ G    A
Sbjct: 716 --GADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEA 773

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             ++  M R+G P  +  Y+ L+ +Y  KG+PADA++ L  M + G  P    +  V+ +
Sbjct: 774 RLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRA 833

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
               G++  A R+   +   G+   L     +++  L  G  E+       + QS +V
Sbjct: 834 YGNVGKLSDACRIFYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYKDLSQSFTV 891



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 9/266 (3%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + G L  A  +  +M +  ++     + +LI  + K G +  +V+ F+++    V     
Sbjct: 661 KSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEI 720

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y  +       GR   A   F +M ++G +P    YN +L  F  +     A     DM
Sbjct: 721 AYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDM 780

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           + +G     VTY  +++ Y    K  +AE L   M+++ + P    Y  +I+ Y  V + 
Sbjct: 781 RRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKL 840

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            DA RIF E+K+  +      +  L+    D G+  +  ++ +++ + +      +V   
Sbjct: 841 SDACRIFYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYKDLSQSF------TVDQN 894

Query: 308 LLGVQ---CKSGHLNAAADVLKAMIR 330
           L G+    C        AD LK  ++
Sbjct: 895 LYGIAVELCIGAGRRTEADQLKVELK 920



 Score = 45.4 bits (106), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 2/195 (1%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           A   + A   F+ +E  G F  +   +  +++   R G    AR +L DM +KG      
Sbjct: 732 AGRPKEAADLFQEMETKG-FKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSV 790

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            + +L+ +YG KG   ++  +  +M+  G+    + Y+ + +     G+   A R F ++
Sbjct: 791 TYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYEL 850

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            + GI      +  ++       + E   + ++D+ S+  ++D   Y   +       + 
Sbjct: 851 KTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYKDL-SQSFTVDQNLYGIAVELCIGAGRR 909

Query: 213 DEAEKLFAEMKEKNI 227
            EA++L  E+K K  
Sbjct: 910 TEADQLKVELKGKGF 924


>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
 gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
          Length = 580

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 235/525 (44%), Gaps = 26/525 (4%)

Query: 39  ALQFFRWV--ERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           AL F+RW   +    + HD   + +++  L    +L+    +L +M  +G   + +    
Sbjct: 12  ALFFYRWAGKQNRSSYKHDSRIYNQVVRNLAAAKRLSDIDSVLGEMMDQGCSLEPEAALD 71

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+  Y    +V  +  IF+ ++  G E     Y+ +F  + +  R+    R    ++++ 
Sbjct: 72  LVVCYANGAMVDRAQAIFNELRHQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAKN 131

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT--YNTMINGYNRFKKMDE 214
              +  T + ++  F  +L ++ A+RF + M S+G+ + + T  YN +I G  +  ++DE
Sbjct: 132 FTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDE 191

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A +L+  M+  N+   + +Y  MI+    +   + A ++   M+  D KP+   YT ++ 
Sbjct: 192 ALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVIN 251

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI- 333
           G C  G       +L  M E    P D  VF  ++G  CK+   + A  VLK  I     
Sbjct: 252 GFCKLGNFKNAVVLLGRMKEAGYAP-DAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCE 310

Query: 334 PTEAGHYGILIENFCKAE--MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
           P E  ++ +  E  C A   +Y R +K L K            T  +EA+    +++ L 
Sbjct: 311 PDEVTYFKLAQERKCPATNLLYSRLMKCLCK------------TGKVEAAC--QLLEDL- 355

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            NG     ++      K    D V ++ +I      G  D  F +VK M  RGV  DA  
Sbjct: 356 TNGSRESEQLLGGDGCKP---DVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVV 412

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y   + ++ R     DA   L+ M+E G  P    + +++ +L   G+ + A R+ + MV
Sbjct: 413 YTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMV 472

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
           E G++ N+    +++ AL     +E A    + M  S  VP+ ++
Sbjct: 473 ETGIEPNVFTYTQLIRALCSTKKLEGARHLFNFMKLSKCVPDMET 517



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 96/457 (21%), Positives = 190/457 (41%), Gaps = 43/457 (9%)

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D   YN ++      K++ + + +  EM ++       +   ++  Y      D A  IF
Sbjct: 30  DSRIYNQVVRNLAAAKRLSDIDSVLGEMMDQGCSLEPEAALDLVVCYANGAMVDRAQAIF 89

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           +E++    +  A  Y  +   L    +  +V +++ +++ +     D++    L+ + CK
Sbjct: 90  NELRHQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAKNFTFSDSTA-DALVRIFCK 148

Query: 315 SGHLNAAADVLKAMIR--LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           +  ++ A   LK M    L +      Y  LIE  CK +  D A++L +        L  
Sbjct: 149 ALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYE--------LMR 200

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
            + +  +  +YN MI+ +   G   +AE   + + +     D   +  +I G  K GN  
Sbjct: 201 GNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVINGFCKLGNFK 260

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG------------ 479
           +A  ++  M   G   DA  + C+I    +  +  +A   L   IE G            
Sbjct: 261 NAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFKLA 320

Query: 480 ---HSPASSLFRS-VMESLFEDGRVQTASRVMKSMVE-----------KGVKENLDLVAK 524
                PA++L  S +M+ L + G+V+ A ++++ +              G K ++ + + 
Sbjct: 321 QERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSI 380

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           +++AL   G  +E    +  M + G  P+   +   L       +   A +LL+  +   
Sbjct: 381 VIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAG 440

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
           C  D+ SY  +L AL +AG+   A   LF++M + G+
Sbjct: 441 CYPDVISYNTLLFALCSAGQEEEACR-LFQVMVETGI 476



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 65/124 (52%)

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M   G++P    Y + L+ F  S +L+ A R  E M   G   DV++YNT++       +
Sbjct: 401 MEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLLFALCSAGQ 460

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
            +EA +LF  M E  IEP V +YT +I+   + ++ + A  +F+ MK     P+  TY A
Sbjct: 461 EEEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGARHLFNFMKLSKCVPDMETYKA 520

Query: 272 LLPG 275
           L+ G
Sbjct: 521 LILG 524



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 11/207 (5%)

Query: 61  KMIEILGRVGKLNHARCILLDMPK-----------KGVQWDEDMFEVLIESYGKKGIVQE 109
           ++++ L + GK+  A  +L D+              G + D  M+ ++I++    G+  E
Sbjct: 334 RLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDALCAMGMTDE 393

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
              +   M++ GV+     Y        R  R   A R    M+  G  P   +YN +L+
Sbjct: 394 GFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLLF 453

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
               + + E A R F+ M   GI  +V TY  +I      KK++ A  LF  MK     P
Sbjct: 454 ALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGARHLFNFMKLSKCVP 513

Query: 230 TVISYTTMIKGYVAVERADDALRIFDE 256
            + +Y  +I G+   E   +A ++ ++
Sbjct: 514 DMETYKALILGHYQNEGVREARQLLEQ 540


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 148/631 (23%), Positives = 272/631 (43%), Gaps = 77/631 (12%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R+G + +A  ++ ++   GV  D      LI+ Y +  ++ ++ ++ +   +  V+  + 
Sbjct: 209 RIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIV 268

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLS-------------------EGIEPTRHTYNVML 168
           +Y+ L K   + G    A+  FN++L                    + ++PT  TY  ++
Sbjct: 269 TYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLI 328

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
             +   + +E +   ++ M   GI  DVVT ++++ G+ R  K+ EA  LF EM E  ++
Sbjct: 329 AAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLD 388

Query: 229 PTVISY-----------------------------------TTMIKGYVAVERADDALRI 253
           P  +SY                                   TT++ G   V +  +A  +
Sbjct: 389 PNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEV 448

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F+ +   ++ PN VTY+ALL G C  GKM   + VL++M + ++PP +   F  ++    
Sbjct: 449 FETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP-NVITFSSIINGYA 507

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G L+ A DVL+ M++ ++      Y ILI+ + KA   D A     ++  +       
Sbjct: 508 KKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR------ 561

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPD 431
             L+     ++ ++ +L   G+  +A      +  KG+ DP  V + +LI G+ KEGN  
Sbjct: 562 --LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI-DPDIVNYASLIDGYFKEGNQL 618

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           +A  IV+ M  + +  D  AY  LI+  LR G+  D +     MIE G +P    + +++
Sbjct: 619 AALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDCITYNTII 677

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
            +    G+ + A  ++  M   G+  N      ++  L   G V   +    L+      
Sbjct: 678 NTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRS 737

Query: 552 PNFDSLLSV---LSEKGKTIAAVK-LLDFCLGRDCIIDLASYEKVLDALLAAG---KTLN 604
              D +L +   L   G  +   K +LD  + R    DL +Y  ++          K L 
Sbjct: 738 EKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALK 797

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
            YS +F     G   +  + + L+ GL+  G
Sbjct: 798 TYSQMF---VDGIAPNITTYNTLLGGLSNAG 825



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 143/600 (23%), Positives = 254/600 (42%), Gaps = 54/600 (9%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           K +Q     +  LI +Y K   V+ES  ++  M   G+   V +  ++     R G+   
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   F +M   G++P   +Y  ++   F S ++  A      M  RGIS D+VT  T+++
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G  +  K  EAE++F  + + N+ P  ++Y+ ++ GY  + + + A  +  +M+   V P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N +T+++++ G    G + +   VLREMV+R + P +  V+  L+    K+G  + A D 
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP-NTIVYAILIDGYFKAGEQDVADDF 553

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
            K M    +      + IL+ N  +    D A  L+  +  K I        D +  +Y 
Sbjct: 554 CKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI--------DPDIVNYA 605

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I      G    A    +++ +K +  D VA+N LI+G  + G  D  + +   M   
Sbjct: 606 SLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIEL 664

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  D   Y  +I +Y  KG+  DA   L+ M   G  P +  +  ++  L + G V T 
Sbjct: 665 GLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTP 724

Query: 504 ----------SR--------------------------VMKSMVEKGVKENLDLVAKILE 527
                     SR                          V+  MV++G+  +L     ++ 
Sbjct: 725 ITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIR 784

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG----KTIAAVKLLDFCLGR 580
                 HVE+AL     M   G  PN   +++LL  LS  G          KL+     R
Sbjct: 785 GYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNER 844

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             + + A+Y+ ++      G       +  +++ KG V   K+ + LI+   + G   +A
Sbjct: 845 GLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEA 904



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 129/600 (21%), Positives = 268/600 (44%), Gaps = 41/600 (6%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L +VG L+ A   L +     V  D   +  +I  + +KG+V +   +   M + G
Sbjct: 135 LVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRG 192

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +     + + L K   R G    A+     ++  G+       N ++ G+  ++ +  A 
Sbjct: 193 LCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQAT 252

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM------------------- 222
              E+     + +D+VTYNT++  + +   +  AE LF E+                   
Sbjct: 253 ELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQN 312

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           + KN++PT+++YTT+I  Y      +++  ++ +M    + P+ VT +++L G C  GK+
Sbjct: 313 EIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKL 372

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E   + REM E  + P   S +  ++    KSG +  A ++   M+   I  +      
Sbjct: 373 TEAAVLFREMYEMGLDPNHVS-YATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTT 431

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           +++   K      A ++ + ++  ++ L P         +Y+ ++   C  G+   AE+ 
Sbjct: 432 VMDGLFKVGKTKEAEEVFETIL--KLNLAPNCV------TYSALLDGYCKLGKMELAELV 483

Query: 403 FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
            +++ K+ V  + + F+++I G++K+G    A ++++ M +R V  +   Y  LI+ Y +
Sbjct: 484 LQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFK 543

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
            GE   A      M       ++ +F  ++ +L   GR+  A  ++  M  KG+  ++  
Sbjct: 544 AGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVN 603

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKT---IAAVKLLD 575
            A +++     G+   AL  +  M +      V  +++L+  L   GK        ++++
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE 663

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             L  DCI    +Y  +++     GKT +A  IL ++   G + +  + + LI GL + G
Sbjct: 664 LGLAPDCI----TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 212/493 (43%), Gaps = 35/493 (7%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +++ L +VGK   A  +   + K  +  +   +  L++ Y K G ++ +  + 
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M++  V  +V ++ ++     ++G    A     +M+   + P    Y +++ G+F +
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + + A  F ++MKSR +    V ++ ++N   R  +MDEA  L  +M  K I+P +++Y
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 604

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            ++I GY        AL I  EMK  +++ + V Y AL+ GL   GK  + + V   M+E
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIE 663

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK----- 349
             + P D   +  ++   C  G    A D+L  M    I   A  Y ILI   CK     
Sbjct: 664 LGLAP-DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVP 722

Query: 350 --------------AEMYDRAIKLLDKLVEKEIILRPQST---------LDMEASSYNPM 386
                         +E  D+ +++ +KLV   + L+ Q           +  +  +YN +
Sbjct: 723 TPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNAL 782

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEG----NPDSAFEIVKIMG 441
           I+  C      KA   + Q+   G+   +  +N L+ G S  G      +   ++V  M 
Sbjct: 783 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMN 842

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            RG+  +A  Y  L+  Y R G           MI  G  P    +  ++    + G++ 
Sbjct: 843 ERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 902

Query: 502 TASRVMKSMVEKG 514
            A  ++  ++ KG
Sbjct: 903 EARELLNDLLTKG 915



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 136/652 (20%), Positives = 259/652 (39%), Gaps = 74/652 (11%)

Query: 42  FFRWVERAGLFNHDRETHL------KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           F   + +  +F    +THL       +I +     + + A      M   G+      + 
Sbjct: 39  FSSQIHKDSIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWN 98

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            L+  +   G+V +   ++  M   GV   V S + L   + + G   +A  Y     ++
Sbjct: 99  TLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--ND 156

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            ++    TYN ++WGF     ++       +M  RG+  D +T N ++ GY R   +  A
Sbjct: 157 VVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYA 216

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           E +   + +  +   VI   T+I GY        A  + +     DVK + VTY  LL  
Sbjct: 217 EWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKA 276

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            C  G +   +                S+F ++LG       L     V +  I+   PT
Sbjct: 277 FCKTGDLTRAE----------------SLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPT 320

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  LI  +CK    + +  L  K++   I+  P      +  + + ++   C +G+
Sbjct: 321 LV-TYTTLIAAYCKFVGVEESHSLYKKMIMNGIM--P------DVVTCSSILYGFCRHGK 371

Query: 396 TGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
             +A + FR++ + G LDP  V++  +I    K G    AF +   M  RG+  D     
Sbjct: 372 LTEAAVLFREMYEMG-LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCT 430

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            +++   + G+  +A+   +++++   +P    + ++++   + G+++ A  V++ M ++
Sbjct: 431 TVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE 490

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-------------------- 553
            V  N+   + I+     +G + +A+  +  M+Q   +PN                    
Sbjct: 491 HVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVA 550

Query: 554 ------------------FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
                             FD LL+ L   G+   A  L+     +    D+ +Y  ++D 
Sbjct: 551 DDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG 610

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
               G  L A SI+ ++ EK    D  + + LI GL + G      + SRMI
Sbjct: 611 YFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMI 662



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 249/575 (43%), Gaps = 25/575 (4%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R GKL  A  +  +M + G+  +   +  +I S  K G V E+  +   M   G+   + 
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +   +   + + G+   A+  F  +L   + P   TY+ +L G+    K+E A    + M
Sbjct: 428 TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           +   +  +V+T++++INGY +   + +A  +  EM ++N+ P  I Y  +I GY      
Sbjct: 488 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQ 547

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           D A     EMKS  ++ + V +  LL  L   G+M E + ++ +M  + I P D   +  
Sbjct: 548 DVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDP-DIVNYAS 606

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+    K G+  AA  +++ M   +I  +   Y  LI+   +   YD    +  +++  E
Sbjct: 607 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMI--E 663

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
           + L P      +  +YN +I   C  G+T  A     ++   G++ + V +N LI G  K
Sbjct: 664 LGLAP------DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCK 717

Query: 427 EG---NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG-EPADAKTALDSMIEDGHSP 482
            G    P +   +VK   R      AD  + + E  +  G E    K  LD M++ G S 
Sbjct: 718 TGFVPTPITHKFLVKAYSRS---EKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISA 774

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL----LMRGHVEEA 538
               + +++        V+ A +    M   G+  N+     +L  L    LM   +EE 
Sbjct: 775 DLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEET 834

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
              +  M + G VPN   +D L+S     G     + L    + +  +  L +Y  ++  
Sbjct: 835 EKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISD 894

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
              +GK + A  +L  ++ KG + +  + D L  G
Sbjct: 895 YAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 929



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 4/186 (2%)

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF- 171
           + D M + G+   + +Y+AL +          A + +++M  +GI P   TYN +L G  
Sbjct: 763 VLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLS 822

Query: 172 ---FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
               +   +E   +   +M  RG+  +  TY+ +++GY R     +   L  EM  K   
Sbjct: 823 NAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFV 882

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           PT+ +Y  +I  Y    +  +A  + +++ +    PN+ TY  L  G  +     E+ + 
Sbjct: 883 PTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRS 942

Query: 289 LREMVE 294
           L+   E
Sbjct: 943 LKRSYE 948



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 55/101 (54%), Gaps = 1/101 (0%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M ++G+  +   +++L+  YG+ G  ++++ +   M   G   ++K+Y+ L     + G
Sbjct: 840 EMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSG 899

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           + + A+   N +L++G  P   TY+++  G +L+L  E  I
Sbjct: 900 KMIEARELLNDLLTKGRIPNSFTYDILTCG-WLNLSYEPEI 939


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 195/398 (48%), Gaps = 12/398 (3%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G++  +  +L+++ + G   +  ++  LI+   KKG ++++  +F  M + G+  +  +Y
Sbjct: 177 GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTY 236

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             L   + + G        + KM   G+ P  +TYN ++       + + A + F++M+ 
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRE 296

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           RG+S ++VTYNT+I G  R  K +EA K+  +MK   I P +I+Y T+I G+ +V +   
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGK 356

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           AL +  ++KS  + P+ VTY  L+ G C  G      K+++EM ER I P     +  L+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP-SKVTYTILI 415

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
               +S ++  A  +  +M  L +  +   Y +LI  FC     + A +L   +VEK  +
Sbjct: 416 DTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK--M 473

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEG 428
           L P   +      YN MI   C  G + +A   FR + +K +   VA ++ LIR   KE 
Sbjct: 474 LEPNEVI------YNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKER 527

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
               A ++V+ M   G+  D    IC + S  +   P 
Sbjct: 528 KLKEAEDLVEKMIDSGI--DPSDTICNLISRAKTDSPV 563



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 208/417 (49%), Gaps = 13/417 (3%)

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
            N   C   +  K  V  D   F ++I+   + G +++S  +   +++ G   +V  Y  
Sbjct: 145 FNQWWC-FFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTT 203

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L     ++G    AK  F +M   G+     TY V++ G F +   +     +E M+  G
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG 263

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           +  ++ TYN ++N   +  +  +A K+F EM+E+ +   +++Y T+I G     +A++A 
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           ++ D+MKS+ + PN +TY  L+ G C  GK+ +   + R++  R + P   +  + + G 
Sbjct: 324 KVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGF 383

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            C+ G  + AA ++K M    I      Y ILI+ F +++  + AI+L   +  +E+ L 
Sbjct: 384 -CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSM--EELGLV 440

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGN 429
           P      +  +Y+ +I   C  GQ  +A   F+ +++K +L+P  V +N +I G+ KEG+
Sbjct: 441 P------DVHTYSVLIHGFCIKGQMNEASRLFKSMVEK-MLEPNEVIYNTMILGYCKEGS 493

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
              A  + + M  + +  +  +Y  LI    ++ +  +A+  ++ MI+ G  P+ ++
Sbjct: 494 SYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTI 550



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/484 (21%), Positives = 216/484 (44%), Gaps = 12/484 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++EV+I +Y +   +  S+  F+ M   G       ++ L   ++    +     +FN+ 
Sbjct: 96  LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES 155

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
             + +    +++ +++ G   + ++E +     +++  G S +VV Y T+I+G  +  ++
Sbjct: 156 KIKVVLDV-YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           ++A+ LF EM +  +     +YT +I G            ++++M+   V PN  TY  +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCV 274

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  G+  +  KV  EM ER +   +   +  L+G  C+    N A  V+  M    
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSC-NIVTYNTLIGGLCREMKANEANKVMDQMKSYV 333

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I      Y  LI+ FC      +A+ L   L  K   L P         +YN ++   C 
Sbjct: 334 INPNLITYNTLIDGFCSVGKLGKALSLCRDL--KSRGLSPSLV------TYNVLVSGFCR 385

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G T  A    +++ ++G+    V +  LI   ++  N ++A ++   M   G+  D   
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHT 445

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI  +  KG+  +A     SM+E    P   ++ +++    ++G    A R+ + M 
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDME 505

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAV 571
           EK +  N+   + ++  L     ++EA   ++ M+ SG  P+ D++ +++S         
Sbjct: 506 EKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS-DTICNLISRAKTDSPVA 564

Query: 572 KLLD 575
           +++D
Sbjct: 565 QIID 568



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 145/281 (51%), Gaps = 1/281 (0%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + +N V N L     ++ A + F  +   G+ + +  T+  +I  L R  K N A  ++ 
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFKVFDEMRERGV-SCNIVTYNTLIGGLCREMKANEANKVMD 327

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M    +  +   +  LI+ +   G + +++ +   +K  G+  S+ +Y+ L     R+G
Sbjct: 328 QMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKG 387

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A +   +M   GI+P++ TY +++  F  S  +ETAI+    M+  G+  DV TY+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYS 447

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G+    +M+EA +LF  M EK +EP  + Y TMI GY     +  ALR+F +M+  
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           ++ PN  +Y+ L+  LC   K+ E + ++ +M++  I P D
Sbjct: 508 ELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSD 548



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/328 (21%), Positives = 148/328 (45%), Gaps = 14/328 (4%)

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
           T++  Y ++I  + +++  D +I   +++V+K  +  P S      + +N ++  +  + 
Sbjct: 92  TKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFV--PGS------NCFNNLLTFVVGSS 143

Query: 395 QTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
              +   FF +   K VLD  +F  +I+G  + G  + +F+++  +   G   +   Y  
Sbjct: 144 SFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTT 203

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI+   +KGE   AK     M + G       +  ++  LF++G  +    + + M E G
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG 263

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAV 571
           V  NL     ++  L   G  ++A    D M + G   ++  +++L+  L  + K   A 
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           K++D         +L +Y  ++D   + GK   A S+   +  +G      + + L++G 
Sbjct: 324 KVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGF 383

Query: 632 NQEGNTKQADILSRMIRGEMSRGSQKEK 659
            ++G+T  A   ++M++    RG +  K
Sbjct: 384 CRKGDTSGA---AKMVKEMEERGIKPSK 408


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/481 (23%), Positives = 220/481 (45%), Gaps = 12/481 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQ 119
           +++ L   GK   A  +L  M + G     D+  +  +I+ + K+G V ++  +F  M Q
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G+   + +Y ++   + +      A+ +  +M+++G+ P   TYN +++G+  + + + 
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+R F++M+ + I  DVV  NT++    ++ K+ EA  +F  M  K   P V SYT M+ 
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY       D   +FD M    + P   T+  L+    + G + +   +  EM +  + P
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
              + +M ++   C+ G ++ A +    MI   +  +   Y  LI+ FC      +A +L
Sbjct: 430 HVVT-YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
           + +++         + + ++   +  +I +LC  G+   A+  F   +  G+  D V +N
Sbjct: 489 ISEIM--------NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L+ G+   G  + A  +   M   G+  +   Y  L+  Y + G   +  +    M++ 
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P++ L+  +++ LFE GR   A      M E G+  N    + +L  L      +EA
Sbjct: 601 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 660

Query: 539 L 539
           +
Sbjct: 661 I 661



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 133/571 (23%), Positives = 252/571 (44%), Gaps = 47/571 (8%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRY 142
           + G++ D  +   L++ + +     E++ I      +LG    V SY+ L K +  +G+ 
Sbjct: 141 RTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKS 200

Query: 143 MMAKRYFNKMLSEG---IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
             A     +M++EG     P    YN ++ GFF    +  A   F++M  RGI  D+VTY
Sbjct: 201 GQADDLL-RMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 259

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           +++++   + + MD+AE    +M  K + P   +Y  +I GY +  +  +A+R+F EM+ 
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 319

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+ V    L+  LC  GK+ E + V   M  +   P   S  + L G   K G L 
Sbjct: 320 QSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATK-GCLV 378

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
              D+   M+   I      + +LI+ +    M D+A+ + +++ +  +  +P       
Sbjct: 379 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGV--KPHVV---- 432

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +Y  +I  LC  G+   A   F Q++ +GV+ D  A++ LI+G    G+   A E++ 
Sbjct: 433 --TYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELIS 490

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            +   G+  D   +  +I +  + G   DA+   D  +  G  P + ++  +M+     G
Sbjct: 491 EIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVG 550

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL 558
           +++ A RV  +MV  G++ N+     ++      G ++E L     M+Q G  P+     
Sbjct: 551 KMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS----- 605

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
           ++L                           Y  ++D L  AG+T+ A     ++ E G  
Sbjct: 606 TIL---------------------------YNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638

Query: 619 TDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
            +  +   ++ GL +     +A  L + +R 
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 126/559 (22%), Positives = 241/559 (43%), Gaps = 47/559 (8%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V +      +   A   F+ + + G+   D  T+  ++  L +   ++ A   L  M
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDLVTYSSVVHALCKARAMDKAEAFLRQM 282

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KGV  D   +  LI  Y   G  +E+V++F  M++  +   V + + L   + + G+ 
Sbjct: 283 VNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKI 342

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F+ M  +G  P   +Y +ML G+     L      F+ M   GI+  + T+N +
Sbjct: 343 KEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVL 402

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  Y     +D+A  +F EM++  ++P V++Y T+I     + + DDA+  F++M    V
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVE---------------------RYIPPK- 300
            P+   Y  L+ G C  G +++ ++++ E++                      R +  + 
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522

Query: 301 ------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                       D  V+  L+   C  G +  A  V  AM+   I      YG L+  +C
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 582

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K    D  + L  ++++K I  +P + L      YN +I  L   G+T  A++ F ++ +
Sbjct: 583 KIGRIDEGLSLFREMLQKGI--KPSTIL------YNIIIDGLFEAGRTVPAKVKFHEMTE 634

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G+ ++   ++ ++RG  K    D A  + K +    V  D      +I    +     +
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           AK    S+   G  P +  +  ++ +L ++G V+ A  +  SM   G + +  L+  ++ 
Sbjct: 695 AKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754

Query: 528 ALLMRGHVEEA---LGRID 543
            LL +  +  A   L +ID
Sbjct: 755 ELLKKNEIVRAGAYLSKID 773



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 180/389 (46%), Gaps = 10/389 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F VLI++Y   G++ +++ IF+ M+  GV+  V +Y  +   + R G+   A   FN+M+
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G+ P ++ Y+ ++ GF     L  A     ++ + G+ LD+V + ++IN   +  ++ 
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A+ +F       + P  + Y  ++ GY  V + + ALR+FD M S  ++PN V Y  L+
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  G++ E   + REM+++ I P    ++  ++    ++G    A      M    I
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPS-TILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y I++    K   +D AI L  +L    +         ++  + N MI  +   
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV--------KIDIITLNTMIAGMFQT 689

Query: 394 GQTGKAEIFFRQLMKKGVLD-PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A+  F  + + G++   V ++ +I    KEG  + A ++   M   G   D+   
Sbjct: 690 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 749

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHS 481
             ++   L+K E   A   L  + E   S
Sbjct: 750 NHVVRELLKKNEIVRAGAYLSKIDERNFS 778



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 114/510 (22%), Positives = 215/510 (42%), Gaps = 58/510 (11%)

Query: 144 MAKRYFNKMLSEG-----IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           +A   FN+  S       + PT +TY +++     + + E A+ FF  +   G+ +D + 
Sbjct: 91  LAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAII 150

Query: 199 YNTMINGYNRFKKMDEA-EKLFAEMKEKNIEPTVISYTTMIKGYV---AVERADDALRIF 254
            + ++ G+   K+ DEA + L     E    P V SY  ++K         +ADD LR+ 
Sbjct: 151 ASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMM 210

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            E  +    P+ V Y  ++ G    G + +   + +EMV+R IPP               
Sbjct: 211 AEGGTV-CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP--------------- 254

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
                   D++              Y  ++   CKA   D+A   L ++V K ++  P +
Sbjct: 255 --------DLVT-------------YSSVVHALCKARAMDKAEAFLRQMVNKGVL--PDN 291

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
                  +YN +I      GQ  +A   F+++ ++ +L D VA N L+    K G    A
Sbjct: 292 W------TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            ++   M  +G   D  +Y  ++  Y  KG   D     D M+ DG +P    F  ++++
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 405

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
               G +  A  +   M + GVK ++     ++ AL   G +++A+ + + M+  G VP+
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              +  L+      G  + A +L+   +     +D+  +  +++ L   G+ ++A +I  
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             +  G   D    + L+ G    G  ++A
Sbjct: 526 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 555



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 117/227 (51%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VGK+  A  +   M   G++ +   +  L+  Y K G + E + +F  M Q G++ S   
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y+ +   +   GR + AK  F++M   GI   + TY+++L G F +   + AI  F++++
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 668

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  + +D++T NTMI G  + ++++EA+ LFA +    + P  ++Y+ MI   +     +
Sbjct: 669 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVE 728

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           +A  +F  M++   +P++     ++  L    ++V     L ++ ER
Sbjct: 729 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 188/421 (44%), Gaps = 11/421 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G   +   + VL++   K+G+  +++K+FD M   G+  +VK Y  L   +   G+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A +    M  +G  P   TYN  L G     ++  A +    ++  G +L +  Y+ 
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSC 317

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G  + ++ DE    +  M E+NI P V+ YT MI+G     R +DAL   D MK   
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             P+   Y  +L  LCD G +     +  EM++  +     +  + + G+ CK G ++ A
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL-CKRGLVDEA 436

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL-------VEKEIILRPQS 374
             +   M           Y  LI+ F +    + A  L  K+       +   + L    
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQ 496

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
             D E  S   ++  +C +GQ  KA    R ++  GV+ D V +N LI G  K  N D A
Sbjct: 497 VCDSE--SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGA 554

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             + K +  +G+  D   Y  LI+  LR     DA     ++++ G SP+ S++ S+M S
Sbjct: 555 VRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRS 614

Query: 494 L 494
           L
Sbjct: 615 L 615



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 163/374 (43%), Gaps = 21/374 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L   GK++ A  +L  M  KG   DE  +   +    K G V E+ +   +++  G
Sbjct: 248 LLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG 307

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               +K Y  L   + +  R+     Y+  ML   I P    Y +M+ G   + ++E A+
Sbjct: 308 FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            F + MK +G   D   YNT++        ++ A  L +EM + N+     + T MI G 
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP-- 299
                 D+A++IFDEM      P  +TY AL+ G    G++ E + +  +M     P   
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLF 487

Query: 300 ----------KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
                      D+    KL+   C+SG +  A  +L+++I   +  +   Y  LI   CK
Sbjct: 488 LRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCK 547

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
           A   D A++L  +L  K I   P         +Y  +I  L    +   A + F+ +++ 
Sbjct: 548 ARNLDGAVRLFKELQLKGI--SPDEI------TYGTLIDGLLRAHRENDAMMLFQNILQS 599

Query: 410 GVLDPVA-FNNLIR 422
           G    ++ +N+++R
Sbjct: 600 GSSPSLSIYNSMMR 613



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 3/193 (1%)

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+P  + A+  L+ ++   G  ADA  A   M E    P + ++ +++++L + G +  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             +   MV  G   N      +++ L  +G   +AL   D M+  G +PN   +  LLS 
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L   GK   AV+LL     + C+ D  +Y   L  L   G+   A+  L  + + G    
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 621 WKSSDKLIAGLNQ 633
            K    LI GL Q
Sbjct: 312 LKGYSCLIDGLFQ 324



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 87/224 (38%), Gaps = 36/224 (16%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D +    L+    + G V ++ K+   +   GV   V +Y+ L   + +      A R F
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
            ++  +GI P   TY  ++ G   + +   A+  F+++   G S  +  YN+M+    R 
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRM 618

Query: 210 KKMDEAEKLFAEMKEKN----IEPTVIS-------------------------------- 233
           KK+ +A  L+ +   K     +E  V++                                
Sbjct: 619 KKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNP 678

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           YT  + G   V R DDALRIF  ++ F +         L+  LC
Sbjct: 679 YTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 8/252 (3%)

Query: 414 PVAF--NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           P AF  N +++     G    A  +   M   G   +   Y  L++   ++G   DA   
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            D M++ G  P   ++  ++ SL   G++  A +++ SM +KG   +       L  L  
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 532 RGHVEEALGRIDLMMQSGS----VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            G V EA  R+ +M+Q G     +  +  L+  L +  +           L R+   D+ 
Sbjct: 290 VGRVNEAFQRL-VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV 348

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL-SRM 646
            Y  ++     AG+  +A S L  + +KG V D    + ++  L   G+ ++A  L S M
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 647 IRGEMSRGSQKE 658
           ++  +   S  +
Sbjct: 409 LQNNLVLDSTTQ 420



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 10/178 (5%)

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
           ADA+ A       G   +SS F +++ +    GR   A +    M E   +    +   I
Sbjct: 126 ADARAA-------GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTI 178

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           L+AL+  G +  AL   + M+ +G  PN   ++ L+  L ++G    A+K+ D  L R  
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           + ++  Y  +L +L  AGK   A  +L  + +KG + D  + +  ++GL + G   +A
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEA 296


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/581 (22%), Positives = 259/581 (44%), Gaps = 13/581 (2%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           + D  +V  V+ G  +SE A++F+ W E    F+H +     ++ +L   G        L
Sbjct: 84  ELDPFVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAYIVSLLFVDGNFALLSEFL 143

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             +  +GV     ++ +L+  Y + G     +  FD M   G       Y+    ++++ 
Sbjct: 144 GTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKN 203

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
             + + ++Y+   LS+G+  T  TY+  +     S ++E       DM   G S D+   
Sbjct: 204 CCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWAC 263

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N  I+   +  ++ +A ++  +M+ K   P V++YTT++      +R  +A+ +++EM  
Sbjct: 264 NIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVK 323

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             +KP+ V   AL+ GLC   K+ E  ++   M+   I     S++  L+    ++G ++
Sbjct: 324 MGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELS-VSIYNALISGFWRAGSID 382

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  ++  M           Y IL+ ++C   M ++A  L+ K+          S ++ +
Sbjct: 383 KAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKM--------ETSGVNPD 434

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             SYN +++ LC   Q  KA  F    M+  G  D V+ N LI    K     SA E+ K
Sbjct: 435 RYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFK 494

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  +G+  DA  Y  LI      G    A+   + M++    P  +L+  ++  L + G
Sbjct: 495 EMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVG 554

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
            ++ A ++   M++K +  ++     ++  L       EAL     M   G  P+   F 
Sbjct: 555 DLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFK 614

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
            L++ L ++G++  A ++ ++ +    I+D    E+++  L
Sbjct: 615 YLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLISVL 655



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/340 (21%), Positives = 121/340 (35%), Gaps = 47/340 (13%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y IL+  + +A  +D  I   D++V         S        YN  I  L  N      
Sbjct: 158 YRILLSGYVRAGKFDSVIGTFDEMV--------MSGCREFGIDYNRYIGVLIKNCCFDLV 209

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           E ++   + KG+ L P  ++  I    +    +   E++  M R G   D  A    I+ 
Sbjct: 210 EKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDC 269

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             ++    DA   ++ M   G  P    + +V+  L  + R   A  + + MV+ G+K +
Sbjct: 270 LCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPD 329

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLD 575
           +     ++  L     VEEA      M+      SV  +++L+S     G    A  ++ 
Sbjct: 330 VVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIIS 389

Query: 576 F-----C----------LGRDCII--------------------DLASYEKVLDALLAAG 600
           F     C          L   C I                    D  SY ++L  L    
Sbjct: 390 FMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTH 449

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +   A++ +   ME GG  D  S + LI    +    K A
Sbjct: 450 QLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSA 489


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 188/421 (44%), Gaps = 11/421 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G   +   + VL++   K+G+  +++K+FD M   G+  +VK Y  L   +   G+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A +    M  +G  P   TYN  L G     ++  A +    ++  G +L +  Y+ 
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSC 317

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G  + ++ DE    +  M E+NI P V+ YT MI+G     R +DAL   D MK   
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             P+   Y  +L  LCD G +     +  EM++  +     +  + + G+ CK G ++ A
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL-CKRGLVDEA 436

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL-------VEKEIILRPQS 374
             +   M           Y  LI+ F +    + A  L  K+       +   + L    
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQ 496

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
             D E  S   ++  +C +GQ  KA    R ++  GV+ D V +N LI G  K  N D A
Sbjct: 497 VCDSE--SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGA 554

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             + K +  +G+  D   Y  LI+  LR     DA     ++++ G SP+ S++ S+M S
Sbjct: 555 VRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRS 614

Query: 494 L 494
           L
Sbjct: 615 L 615



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 163/374 (43%), Gaps = 21/374 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L   GK++ A  +L  M  KG   DE  +   +    K G V E+ +   +++  G
Sbjct: 248 LLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG 307

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               +K Y  L   + +  R+     Y+  ML   I P    Y +M+ G   + ++E A+
Sbjct: 308 FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            F + MK +G   D   YNT++        ++ A  L +EM + N+     + T MI G 
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP-- 299
                 D+A++IFDEM      P  +TY AL+ G    G++ E + +  +M     P   
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLF 487

Query: 300 ----------KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
                      D+    KL+   C+SG +  A  +L+++I   +  +   Y  LI   CK
Sbjct: 488 LRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCK 547

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
           A   D A++L  +L  K I   P         +Y  +I  L    +   A + F+ +++ 
Sbjct: 548 ARNLDGAVRLFKELQLKGI--SPDEI------TYGTLIDGLLRAHRENDAMMLFQNILQS 599

Query: 410 GVLDPVA-FNNLIR 422
           G    ++ +N+++R
Sbjct: 600 GSSPSLSIYNSMMR 613



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 3/193 (1%)

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+P  + A+  L+ ++   G  ADA  A   M E    P + ++ +++++L + G +  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             +   MV  G   N      +++ L  +G   +AL   D M+  G +PN   +  LLS 
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L   GK   AV+LL     + C+ D  +Y   L  L   G+   A+  L  + + G    
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 621 WKSSDKLIAGLNQ 633
            K    LI GL Q
Sbjct: 312 LKGYSCLIDGLFQ 324



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 87/224 (38%), Gaps = 36/224 (16%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D +    L+    + G V ++ K+   +   GV   V +Y+ L   + +      A R F
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
            ++  +GI P   TY  ++ G   + +   A+  F+++   G S  +  YN+M+    R 
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRM 618

Query: 210 KKMDEAEKLFAEMKEKN----IEPTVIS-------------------------------- 233
           KK+ +A  L+ +   K     +E  V++                                
Sbjct: 619 KKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNP 678

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           YT  + G   V R DDALRIF  ++ F +         L+  LC
Sbjct: 679 YTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 8/252 (3%)

Query: 414 PVAF--NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           P AF  N +++     G    A  +   M   G   +   Y  L++   ++G   DA   
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            D M++ G  P   ++  ++ SL   G++  A +++ SM +KG   +       L  L  
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 532 RGHVEEALGRIDLMMQSGS----VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            G V EA  R+ +M+Q G     +  +  L+  L +  +           L R+   D+ 
Sbjct: 290 VGRVNEAFQRL-VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV 348

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL-SRM 646
            Y  ++     AG+  +A S L  + +KG V D    + ++  L   G+ ++A  L S M
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 647 IRGEMSRGSQKE 658
           ++  +   S  +
Sbjct: 409 LQNNLVLDSTTQ 420



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 10/178 (5%)

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
           ADA+ A       G   +SS F +++ +    GR   A +    M E   +    +   I
Sbjct: 126 ADARAA-------GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTI 178

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           L+AL+  G +  AL   + M+ +G  PN   ++ L+  L ++G    A+K+ D  L R  
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           + ++  Y  +L +L  AGK   A  +L  + +KG + D  + +  ++GL + G   +A
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEA 296


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 190/422 (45%), Gaps = 13/422 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G   +   + VL++   K+G+  +++K+FD M   G+  +VK Y  L   +   G+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A +    M  +G  P   TYN  L G     ++  A +    ++  G +L +  Y+ 
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSC 317

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G  + ++ DE    +  M E+NI P V+ YT MI+G     R +DAL   D MK   
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             P+   Y  +L  LCD G +     +  EM++  +     +  + + G+ CK G ++ A
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL-CKRGLVDEA 436

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM--- 378
             +   M           Y  LI+ F +    + A  L  K+   E+   P   L +   
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM---EMGNNPSLFLRLTLG 493

Query: 379 -----EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
                ++ S   ++  +C +GQ  KA    R ++  GV+ D V +N LI G  K  N D 
Sbjct: 494 ANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDG 553

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  + K +  +G+  D   Y  LI+  LR     DA     ++++ G SP+ S++ S+M 
Sbjct: 554 AVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMR 613

Query: 493 SL 494
           SL
Sbjct: 614 SL 615



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 164/374 (43%), Gaps = 21/374 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L   GK++ A  +L  M  KG   DE  +   +    K G V E+ +   +++  G
Sbjct: 248 LLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG 307

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
               +K Y  L   + +  R+     Y+  ML   I P    Y +M+ G   + ++E A+
Sbjct: 308 FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            F + MK +G   D   YNT++        ++ A  L +EM + N+     + T MI G 
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP-- 299
                 D+A++IFDEM      P  +TY AL+ G    G++ E + +  +M     P   
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLF 487

Query: 300 ----------KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
                     +D+    KL+   C+SG +  A  +L+++I   +  +   Y  LI   CK
Sbjct: 488 LRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCK 547

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
           A   D A++L  +L  K I   P         +Y  +I  L    +   A + F+ +++ 
Sbjct: 548 ARNLDGAVRLFKELQLKGI--SPDEI------TYGTLIDGLLRAHRENDAMMLFQNILQS 599

Query: 410 GVLDPVA-FNNLIR 422
           G    ++ +N+++R
Sbjct: 600 GSSPSLSIYNSMMR 613



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 3/193 (1%)

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+P  + A+  L+ ++   G  ADA  A   M E    P + ++ +++++L + G +  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             +   MV  G   N      +++ L  +G   +AL   D M+  G +PN   +  LLS 
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L   GK   AV+LL     + C+ D  +Y   L  L   G+   A+  L  + + G    
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 621 WKSSDKLIAGLNQ 633
            K    LI GL Q
Sbjct: 312 LKGYSCLIDGLFQ 324



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 3/225 (1%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D E+  K++  + + G++  A  +L  +   GV  D   +  LI    K   +  +V++F
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             ++  G+     +Y  L   +LR  R   A   F  +L  G  P+   YN M+      
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRM 618

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK--KMDEAEKLFAEMKEKNIEPTVI 232
            KL  AI  + D   +  +  V +   + N +   +   +D+  +   ++ ++    +  
Sbjct: 619 KKLSQAINLWLDYLPKKYNFPVES-EVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSN 677

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
            YT  + G   V R DDALRIF  ++ F +         L+  LC
Sbjct: 678 PYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 8/252 (3%)

Query: 414 PVAF--NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           P AF  N +++     G    A  +   M   G   +   Y  L++   ++G   DA   
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
            D M++ G  P   ++  ++ SL   G++  A +++ SM +KG   +       L  L  
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 532 RGHVEEALGRIDLMMQSGS----VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            G V EA  R+ +M+Q G     +  +  L+  L +  +           L R+   D+ 
Sbjct: 290 VGRVNEAFQRL-VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV 348

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL-SRM 646
            Y  ++     AG+  +A S L  + +KG V D    + ++  L   G+ ++A  L S M
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 647 IRGEMSRGSQKE 658
           ++  +   S  +
Sbjct: 409 LQNNLVLDSTTQ 420



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 10/178 (5%)

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
           ADA+ A       G   +SS F +++ +    GR   A +    M E   +    +   I
Sbjct: 126 ADARAA-------GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTI 178

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           L+AL+  G +  AL   + M+ +G  PN   ++ L+  L ++G    A+K+ D  L R  
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           + ++  Y  +L +L  AGK   A  +L  + +KG + D  + +  ++GL + G   +A
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEA 296


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 204/426 (47%), Gaps = 10/426 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ +  K       + +++ M+ LG+  ++ + + L     R  +  +A  +  KM+
Sbjct: 84  FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G EP+  T+  +L GF    ++  A+  F+ M   G   +VV YNT+I+G  + K++D
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A  L   M++  I P V++Y ++I G  +  R  DA R+   M   ++ P+  T+ AL+
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
                 G++ E ++   EM+ R + P   +  + + G+ C    L+ A ++   M+    
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL-CMYSRLDEAEEMFGFMVSKGC 322

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y ILI  +CK++  +  +KL  ++ ++ ++   ++T+     +Y  +IQ  C  
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV---RNTV-----TYTILIQGYCRA 374

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+   AE  FR+++  GV  + + +N L+ G    G  + A  I+  M + G+  D   Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +I    + GE ADA     S+   G  P    + ++M  L++ G  + A  + + M E
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494

Query: 513 KGVKEN 518
            G+  N
Sbjct: 495 DGILPN 500



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 10/402 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G+  +     +L+  + +   +  ++     M +LG E S+ ++ +L     R  R
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F++M+  G +P    YN ++ G   S +++ A+     M+  GI  DVVTYN+
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G     +  +A ++ + M ++ I P V ++  +I   V   R  +A   ++EM    
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P+ VTY+ L+ GLC   ++ E +++   MV +   P D   +  L+   CKS  +   
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP-DVVTYSILINGYCKSKKVEHG 345

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +   M +  +      Y ILI+ +C+A   + A ++  ++V   +   P         
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV--HPNII------ 397

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN ++  LC NG+  KA +    + K G+  D V +N +IRG  K G    A++I   +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
             +G+  D   Y  ++    +KG   +A      M EDG  P
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 179/376 (47%), Gaps = 10/376 (2%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           H+  T   ++    R  +L+ A   L  M K G +     F  L+  + +   V +++ +
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM 173

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           FD M  +G + +V  Y+ +   + +  +   A    N+M  +GI P   TYN ++ G   
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           S +   A R    M  R I  DV T+N +I+   +  ++ EAE+ + EM  ++++P +++
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y+ +I G     R D+A  +F  M S    P+ VTY+ L+ G C + K+    K+  EM 
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +R +  ++   +  L+   C++G LN A ++ + M+   +      Y +L+   C     
Sbjct: 354 QRGV-VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           ++A+ +L  +         ++ +D +  +YN +I+ +C  G+   A   +  L  +G++ 
Sbjct: 413 EKALVILADM--------QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464

Query: 413 DPVAFNNLIRGHSKEG 428
           D   +  ++ G  K+G
Sbjct: 465 DIWTYTTMMLGLYKKG 480



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 137/266 (51%), Gaps = 1/266 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L  +K  ++AL     +E+ G+   D  T+  +I  L   G+ + A  ++  M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGI-GPDVVTYNSLISGLCSSGRWSDATRMVSCM 247

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K+ +  D   F  LI++  K+G V E+ + ++ M +  ++  + +Y  L   +    R 
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F  M+S+G  P   TY++++ G+  S K+E  ++ F +M  RG+  + VTY  +
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I GY R  K++ AE++F  M    + P +I+Y  ++ G     + + AL I  +M+   +
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKV 288
             + VTY  ++ G+C AG++ +   +
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDI 453



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/468 (20%), Positives = 198/468 (42%), Gaps = 45/468 (9%)

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
           FF  ++ R +   +  ++ +++  ++ KK D    L+ +M+   I   + +   ++  + 
Sbjct: 69  FFHMVQCRPLP-SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              +   AL    +M     +P+ VT+ +LL G C   ++ +   +  +MV     P + 
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP-NV 186

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
            ++  ++   CKS  ++ A D+L  M +  I  +   Y  LI   C +  +  A +++  
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
           + ++EI   P      +  ++N +I      G+  +AE F+ +++++  LDP  V ++ L
Sbjct: 247 MTKREIY--P------DVFTFNALIDACVKEGRVSEAEEFYEEMIRRS-LDPDIVTYSLL 297

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G       D A E+   M  +G   D   Y  LI  Y +  +          M + G 
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
              +  +  +++     G++  A  + + MV  GV  N+     +L  L   G +E+AL 
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            +  M ++G     D+                            D+ +Y  ++  +  AG
Sbjct: 418 ILADMQKNG----MDA----------------------------DIVTYNIIIRGMCKAG 445

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           +  +A+ I   +  +G + D  +   ++ GL ++G  ++AD L R ++
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P  F  N + +          A +F+  + R  L + D  T+  +I  L    +L+
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-DPDIVTYSLLIYGLCMYSRLD 308

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +   M  KG   D   + +LI  Y K   V+  +K+F  M Q GV R+  +Y  L 
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           +   R G+  +A+  F +M+  G+ P   TYNV+L G   + K+E A+    DM+  G+ 
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV--AVERADDAL 251
            D+VTYN +I G  +  ++ +A  ++  +  + + P + +YTTM+ G     + R  DAL
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488

Query: 252 RIFDEMKSFDVKPN 265
             F +MK   + PN
Sbjct: 489 --FRKMKEDGILPN 500



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 3/245 (1%)

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
           ++FF  +  + +     F+ L+   SK    D    + + M   G+P +      L+  +
Sbjct: 67  DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            R  + + A + L  MI+ GH P+   F S++       RV  A  +   MV  G K N+
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
            +   I++ L     V+ AL  ++ M + G  P+   ++SL+S L   G+   A +++  
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
              R+   D+ ++  ++DA +  G+   A     +++ +    D  +   LI GL     
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306

Query: 637 TKQAD 641
             +A+
Sbjct: 307 LDEAE 311


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/505 (23%), Positives = 214/505 (42%), Gaps = 18/505 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           HNLV + L  +     A+  F  V R+        T   +I  L + G +  A  +  + 
Sbjct: 193 HNLVLHGLCKSGKVLAAMDHFEAVRRS--MPVSAATFSILINGLVKAGMMIQAHSLAQET 250

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G   D   +  ++    K   +QE+V + + +   G   ++ +Y+AL   + + GR 
Sbjct: 251 TTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 310

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A     K++  G  P   TY  ++ G     +   A + F++M SRG++LD V Y  +
Sbjct: 311 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTAL 370

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I G  +  K+ +A  ++  M      P V++ +TMI G     R   A+RIF  M++  +
Sbjct: 371 IRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 430

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN V Y+AL+ GLC A KM    ++L +M + +  P D   +  L+   CKSG + AA 
Sbjct: 431 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP-DTITYNILIDGLCKSGDVEAAR 489

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
                M+      +   Y ILI   CKA   D A  +LD +     +             
Sbjct: 490 AFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV------------- 536

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           Y+ ++  LC +G+     + F ++ + GV +      LI    K    D A  +   + +
Sbjct: 537 YSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRK 596

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G+P    AY  +I + ++ G+  + +     M      P    + +++  +    R+  
Sbjct: 597 EGMPHPY-AYNSIISALIKSGKVNEGQAVYQEMTR-WWKPDRVTYNALLNGMIGANRMDR 654

Query: 503 ASRVMKSMVEKGVKENLDLVAKILE 527
           A      M  +G    + ++ K+ +
Sbjct: 655 AHYYYLEMTGRGYVPPVSILHKLAD 679



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 222/528 (42%), Gaps = 74/528 (14%)

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           + W  F  L   ++ RF       G    V T N +++ + R K+  EA  L        
Sbjct: 100 LAWELFQCL---SSPRF-------GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATI 149

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMK-SFDVKPNAVTYTALLPGLCDAGKMVEV 285
             P V ++  +I GY      ++A  +  EM+  F V P+  T+  +L GLC +GK++  
Sbjct: 150 FRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA 209

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
                E V R +P    + F  L+    K+G +  A  + +         +   Y  ++ 
Sbjct: 210 MDHF-EAVRRSMP-VSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVN 267

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
              K +    A+ L++K+          +      ++YN ++  LC  G+  +A    R+
Sbjct: 268 WLAKNKKIQEAVALMEKIT--------ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 319

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           ++  G   D V + +LI G  KE     A+++ K M  RG+  D   Y  LI   L+ G+
Sbjct: 320 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGK 379

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN------ 518
              A +   +M   G  P      ++++ L + GR+  A R+ KSM  +G+  N      
Sbjct: 380 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 439

Query: 519 --------------LDLVAK---------------ILEALLMRGHVEEALGRIDLMMQSG 549
                         L+++A+               +++ L   G VE A    D M+++G
Sbjct: 440 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 499

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS----YEKVLDALLAAGKT 602
             P+   ++ L+S L + G T AA  +LD         D++S    Y  ++D L  +GK 
Sbjct: 500 CKPDVYTYNILISGLCKAGNTDAACGVLD---------DMSSSRFVYSSLVDGLCKSGK- 549

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           L    +LF  ME+ GV + ++  +LI  L +     +A  L   IR E
Sbjct: 550 LEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKE 597


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 142/649 (21%), Positives = 288/649 (44%), Gaps = 48/649 (7%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSE--HALQFFRWVERAGLFNHDRETHLKM 62
           +W+ +L+ ++R L+       V  VL      +   A +FFRW +R   + H  E   +M
Sbjct: 74  SWSPKLEAQLRHLLRVLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEM 133

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           + +L      + AR ++  M ++GV+   + F  L+ SY + G ++ ++++  +M++ G 
Sbjct: 134 LSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGC 193

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
              +   +    +++  GR   A  +  +M   G+EP  +TYN ++ G   + ++  A+ 
Sbjct: 194 APDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAME 253

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK-EKNIEPTVISYTTMIKGY 241
               M   G   D ++Y T+++   + K+++E   L   M+ +  + P  ++Y  +I G 
Sbjct: 254 MIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGL 313

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                AD+AL    E +    + + V Y+A++   C  G+M E ++++ EM+ +   P D
Sbjct: 314 AKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQP-D 372

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++   C+ G L+ A  ++K M +         +  L+   CK      A +LL+
Sbjct: 373 VVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLN 432

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           K   +E    P         +Y+ ++      G+  ++     Q+++KG     V  N L
Sbjct: 433 K--SEEEWWTPSDI------TYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLL 484

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I    K+  P  A + ++    +G   +   +  +I  + R+G+   A + +D M     
Sbjct: 485 IHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNR 544

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    +  V+++L + GR++ A+ +++ M+ +GV     L   +               
Sbjct: 545 HPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGV-----LPTPV--------------- 584

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
                        + +++    EKG     + LL+  L R  +   ++Y +V++ L A G
Sbjct: 585 ------------TYRTVIHRYCEKGNLEDLLNLLEKMLARQEMK--SAYNQVVEKLCAFG 630

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           K   AYS+L+KI+    V D ++   L+      G   QA ++  RM R
Sbjct: 631 KLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFR 679


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 142/649 (21%), Positives = 288/649 (44%), Gaps = 48/649 (7%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSE--HALQFFRWVERAGLFNHDRETHLKM 62
           +W+ +L+ ++R L+       V  VL      +   A +FFRW +R   + H  E   +M
Sbjct: 74  SWSPKLEAQLRQLLRVLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEM 133

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           + +L      + AR ++  M ++GV+   + F  L+ SY + G ++ ++++  +M++ G 
Sbjct: 134 LSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGC 193

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
              +   +    +++  GR   A  +  +M   G+EP  +TYN ++ G   + ++  A+ 
Sbjct: 194 APDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAME 253

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK-EKNIEPTVISYTTMIKGY 241
               M   G   D ++Y T+++   + K+++E   L   M+ +  + P  ++Y  +I G 
Sbjct: 254 MIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGL 313

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                AD+AL    E +    + + V Y+A++   C  G+M E ++++ EM+ +   P D
Sbjct: 314 AKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQP-D 372

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++   C+ G L+ A  ++K M +         +  L+   CK      A +LL+
Sbjct: 373 VVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLN 432

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           K   +E    P         +Y+ ++      G+  ++     Q+++KG     V  N L
Sbjct: 433 K--SEEEWWTPSDI------TYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLL 484

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I    K+  P  A + ++    +G   +   +  +I  + R+G+   A + +D M     
Sbjct: 485 IHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNR 544

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    +  V+++L + GR++ A+ +++ M+ +GV     L   +               
Sbjct: 545 HPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGV-----LPTPV--------------- 584

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
                        + +++    EKG     + LL+  L R  +   ++Y +V++ L A G
Sbjct: 585 ------------TYRTVIHRYCEKGNLEDLLNLLEKMLARQEMK--SAYNQVVEKLCAFG 630

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           K   AYS+L+KI+    V D ++   L+      G   QA ++  RM R
Sbjct: 631 KLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFR 679


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/534 (22%), Positives = 240/534 (44%), Gaps = 55/534 (10%)

Query: 14  IRALVPQFDHNLVYNVL-HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           ++ L+P    + +  VL     +S  AL FF WV+         + +  ++ IL    + 
Sbjct: 82  VKHLLPHLGTDEISRVLLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEF 141

Query: 73  NHARCILLDMPK-------------------KGVQWDEDMFEVLIESYGKKGIVQESVKI 113
             A   L ++ K                   +   WD  +F++L+++Y ++G+++E    
Sbjct: 142 KEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTT 201

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           F  + ++G   SV S + L   +L+  R     + + +M   GI P  +T+N++   F  
Sbjct: 202 FRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQ 261

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
              ++    F E M+  G   D+VTYNT+I+ Y R  ++D+A  L+  M  +N+ P ++S
Sbjct: 262 DGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVS 321

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           YT ++ G     +  +A ++F  M    + P+ V++  L+ G C  GKM E + +L EM+
Sbjct: 322 YTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMI 381

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK---- 349
              I P   +  + + G + K   + +A +++  + R  +P     Y  L+ + C+    
Sbjct: 382 GSGICPDKVTCQVLIEGYR-KEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRP 440

Query: 350 ------------------AEMYDRAIKLLDK--------LVEKEIILRPQSTLDMEASSY 383
                              E+Y++ I+ L K        LV+ E+  R    +   A +Y
Sbjct: 441 FAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHR---NIKPSAITY 497

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             +I  LC   ++ +AE    ++++ G+L DP     L+  + KE +   A  +++   +
Sbjct: 498 KALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAK 557

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
                D+++Y  L+++Y    +        D M++ G +P    FR ++  L++
Sbjct: 558 EFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWK 611



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 211/499 (42%), Gaps = 32/499 (6%)

Query: 156 GIEPTRHTY----NVMLWGF-------FLS--LKLETAIRFFEDM------KSRGISLDV 196
           G++P+   Y    +++ W         FL+  +KL     F ED+        +  + D 
Sbjct: 120 GLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDP 179

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           V ++ ++  Y R   + E    F ++ E    P+VIS   ++ G + + R D   +++ E
Sbjct: 180 VIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKE 239

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    + PN+ T+  L    C  G + +V   L  M E    P D   +  L+   C+ G
Sbjct: 240 MARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEP-DIVTYNTLISCYCRKG 298

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L+ A  + + M R ++  +   Y  L+   CK      A +L  +++ +         L
Sbjct: 299 RLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHR--------GL 350

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
           + +  S+N +I   C  G+  ++     +++  G+  D V    LI G+ KE    SA  
Sbjct: 351 NPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALN 410

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +V  + R GVP   D Y  L+ S   +G P  AK+ L  + + G+ P   ++  ++ESL 
Sbjct: 411 LVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLC 470

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
           +   +  A  V   M  + +K +      ++  L       EA   ++ M+QSG +P+ D
Sbjct: 471 KSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPD 530

Query: 556 ---SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
              +L+ V  ++     A  LL        I D  SY  ++              +  ++
Sbjct: 531 ICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRM 590

Query: 613 MEKGGVTDWKSSDKLIAGL 631
           ++ G   + ++  ++I GL
Sbjct: 591 LKVGFAPNIQTFRQMIHGL 609



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 114/295 (38%), Gaps = 39/295 (13%)

Query: 32  GAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE 91
           G     H L F R + R    N D  +   +I    + GK+  +R +L +M   G+  D+
Sbjct: 333 GKVREAHQL-FHRMIHRG--LNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDK 389

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
              +VLIE Y K+  +  ++ +   +++ GV  S   YD L   I   GR   AK    +
Sbjct: 390 VTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQR 449

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           +   G  P    YN ++     S  +  A+    +M  R I    +TY  +I    R  +
Sbjct: 450 ISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSR 509

Query: 212 MDEAEKLFAEMKEKNIEP----------------------TVI-------------SYTT 236
             EAE L  EM +  + P                      T++             SY T
Sbjct: 510 SMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNT 569

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++K Y     A   + + D M      PN  T+  ++ GL  A   VE  K+L E
Sbjct: 570 LVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKA-MAVEKDKLLLE 623



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 4/197 (2%)

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           L+++Y+R+G   +  T    ++E G  P+      ++  L +  R+    +V K M   G
Sbjct: 185 LVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVG 244

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           +  N      +       G V++    ++ M + G  P+   +++L+S    KG+   A 
Sbjct: 245 IHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAF 304

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            L      R+ + DL SY  +++ L   GK   A+ +  +++ +G   D  S + LI G 
Sbjct: 305 YLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGY 364

Query: 632 NQEGNTKQA-DILSRMI 647
            +EG  +++  +L  MI
Sbjct: 365 CKEGKMRESRSLLHEMI 381


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 133/547 (24%), Positives = 249/547 (45%), Gaps = 14/547 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  MI+ L R G+++ A  +L ++ + G+Q     + VL+++  K G V+E+ ++ 
Sbjct: 210 DVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLK 269

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M +  V  S+ ++  L   + R  ++        +M   GI P    YN M+      
Sbjct: 270 GRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRK 329

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
                A++ F++M S+GI   VVTYN +     +  +M+ AEK+  EM    +      +
Sbjct: 330 GHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLF 389

Query: 235 TTMIKGYV-AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
            +++  ++    R D  LR+  EM +  +KPN    TA +  LC +GK  E  ++  +++
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVL 449

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
            + +     +    + G+ C+  ++  A  VLKAM+   +  +   Y I+I+  CKA   
Sbjct: 450 GKGLGVNVATSNALIHGL-CQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM 508

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-L 412
           D AI+L D ++++    +P      +  ++N  +   C+ G+  +      Q+  +G+  
Sbjct: 509 DEAIQLRDDMIKRG--FKP------DLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKP 560

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D V +  +I G+ K  +   A E +  + + G+  +A  Y  LI  Y R G  +DA   L
Sbjct: 561 DIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGIL 620

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D+M  +G  P    + S+M  +   G V+    V    + K ++  +     I++     
Sbjct: 621 DTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKI 680

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G ++EA+     M   G  PN   + +L+   S+ G    A KL D  +    + D  SY
Sbjct: 681 GKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSY 740

Query: 590 EKVLDAL 596
             ++   
Sbjct: 741 NTLISGF 747



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 207/472 (43%), Gaps = 46/472 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R  +      +L +M   G+  +E ++  +I  + +KG   E++K+FD M   G
Sbjct: 287 LISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKG 346

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN-VMLWGFFLSLKLETA 180
           ++++V +Y+ + K + + G    A++  ++ML  G+      +N V+ W    + +L+  
Sbjct: 347 IKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLV 406

Query: 181 IRFFEDMKSR-----------------------------------GISLDVVTYNTMING 205
           +R   +M +R                                   G+ ++V T N +I+G
Sbjct: 407 LRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHG 466

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +   M EA K+   M    +E   I+Y  MI+G     + D+A+++ D+M     KP+
Sbjct: 467 LCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPD 526

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
             T+   L   C+ GK+ E+  +L +M    + P D   +  ++   CK+  ++ A + L
Sbjct: 527 LFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKP-DIVTYGTIIDGYCKAKDMHKANEYL 585

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             +++  +   A  Y  LI  + +      AI +LD +    I   P         +YN 
Sbjct: 586 TELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTP--------VTYNS 637

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++  +CH G   + +  F Q + K + L  + +  +I+G  K G  D A    K M  RG
Sbjct: 638 LMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRG 697

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +P +   Y  L+ +Y + G   +A    D M+  G  P S  + +++    E
Sbjct: 698 IPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 198/433 (45%), Gaps = 14/433 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +NL+   L      EHA +    +  AG+  H    +  +   L   G+L+    ++ +M
Sbjct: 354 YNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREM 413

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKI-FDIM-KQLGVERSVKSYDALFKLILRRG 140
             + ++ ++ +    I+   K G  +E+ +I F ++ K LGV  +V + +AL   + +  
Sbjct: 414 LARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGV--NVATSNALIHGLCQGN 471

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A +    M++ G+E  R TYN+M+ G   + K++ AI+  +DM  RG   D+ T+N
Sbjct: 472 NMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFN 531

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
             ++ Y    K++E   L  +MK + ++P +++Y T+I GY   +    A     E+   
Sbjct: 532 IFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKN 591

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            ++PNAV Y AL+ G    G + +   +L  M    I P   + +  L+   C +G +  
Sbjct: 592 GLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVT-YNSLMYWMCHAGLVEE 650

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
              V    I   I      Y I+I+ FCK    D A+    ++  + I   P + +    
Sbjct: 651 VKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGI---PPNKM---- 703

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            +Y  ++     +G   +A   F +++  G++ D V++N LI G  +  + D   E    
Sbjct: 704 -TYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAE 762

Query: 440 MGRRGVPRDADAY 452
           M  + + +D  +Y
Sbjct: 763 MSSQVLKQDGCSY 775



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 158/363 (43%), Gaps = 46/363 (12%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           L++ +  G  N + A +  + +  +G+   DR T+  MI+   +  K++ A  +  DM K
Sbjct: 463 LIHGLCQG-NNMKEATKVLKAMVNSGV-ELDRITYNIMIQGCCKASKMDEAIQLRDDMIK 520

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +G + D   F + + +Y   G V+E + + D MK  G++  + +Y  +     +      
Sbjct: 521 RGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHK 580

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  Y  +++  G+ P    YN ++ G+  +  +  AI   + MK  GI    VTYN+++ 
Sbjct: 581 ANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMY 640

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
                  ++E + +FA+   K+IE  VI YT +I+G+  + + D+A+  F EM S  + P
Sbjct: 641 WMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPP 700

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N +TYT L+     +G   E  K+  EMV   I P   S                     
Sbjct: 701 NKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVS--------------------- 739

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
                          Y  LI  FC+       +  LDK+VE    +  Q  L  +  SYN
Sbjct: 740 ---------------YNTLISGFCE-------VDSLDKMVESPAEMSSQ-VLKQDGCSYN 776

Query: 385 PMI 387
             +
Sbjct: 777 AFV 779


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 235/527 (44%), Gaps = 34/527 (6%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G++ ++  Y+++   + + G    A+   NK+   G++P   TY  M+ G+  +  L++A
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
              F  M   G   +  TY+T+ING     +++EA    +EM    + PTV ++T  I  
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVA 342

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY---- 296
              + R +DA +IF +MK    KPN  TYT+L+ G          Q+V R  +  +    
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG----------QRVSRMAIGLFHRMS 392

Query: 297 ----IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
               +P  +   +  L+ V  ++  +++A  V   M +         Y  LI  +C    
Sbjct: 393 RDGVVP--NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGD 450

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            ++A+ +L  +++     RP  TL     +YN +I+  C +G T  A I   +LMK    
Sbjct: 451 TEKAMSMLTNMLKG----RPTPTL----VTYNIIIKGYCDSGDTDVA-IRVLELMKANGC 501

Query: 413 DP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            P   ++  LI G  K    + A  +   M  RG+  +   Y  LI  Y +  +   A  
Sbjct: 502 QPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L+ M   G  P    +  ++  L +      A  + K M+E+ +  ++   + ++  L 
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             G +  AL   + M++ G +PN   + SL+  L ++G+   A ++      +  I D  
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV 681

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           +Y K+++  + +GK   A+  L +++  G     ++ D LI GL  E
Sbjct: 682 TYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 149/627 (23%), Positives = 276/627 (44%), Gaps = 45/627 (7%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           ++ + A + F  ++  G    +  T+  +I  L   G++N A   + +M + GV      
Sbjct: 277 RDLDSAFEIFNRMDEEGC-EPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHT 335

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F   I +    G ++++ KIF  MK+ G + +V +Y +   LI  +    MA   F++M 
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTS---LISGQRVSRMAIGLFHRMS 392

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            +G+ P   TYN ++     ++++++A+  F  M   G   +  +YN +I GY      +
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  +   M +    PT+++Y  +IKGY      D A+R+ + MK+   +P+  +YT L+
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C   KM     +  EM++R + P +   +  L+   CK   L+ AA +L+ M R   
Sbjct: 513 SGFCKISKMELASGMFNEMMDRGLCPNE-VTYTALISGYCKDEKLDCAARMLERMKRSGC 571

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y +LI    K   +  A +L   ++E++I          +  +Y+ +I  LC+N
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKI--------SPDVVTYSTVINGLCNN 623

Query: 394 GQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G    A   F +++K G L  +  +++LI+   +EG  + A E+   + ++G+  D   Y
Sbjct: 624 GAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTY 683

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPA--------------------SSLFRSVME 492
           + +IE  +  G+   A   L  MI  G  P                      +L  +   
Sbjct: 684 VKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAAST 743

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR----GHVEEALGRIDLMMQS 548
           S F+D  +     V+  +  K  + + +L  ++ +ALL R    G   EA      M+  
Sbjct: 744 STFDDQIIN--KDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQ 801

Query: 549 GSVPNFDS----LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
              PN D+    L+S+L    K   A+ +      + C + L  Y++++  L    +   
Sbjct: 802 SQCPNQDTYKHFLISLL-RALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKE 860

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGL 631
           A  +  K++ +    D      LI GL
Sbjct: 861 ARFVFEKMLSRALNADEIVWTILINGL 887



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/496 (23%), Positives = 218/496 (43%), Gaps = 13/496 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L + G +  A  I+  + K G++ D   +  +I  Y +   +  + +IF+ M + G
Sbjct: 234 VINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEG 293

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E +  +Y  L   +   GR   A  + ++M   G+ PT HT+   +       ++E A 
Sbjct: 294 CEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAW 353

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F DMK +G   +V TY ++I+G  R  +M  A  LF  M    + P  ++Y  ++   
Sbjct: 354 KIFIDMKKKGCKPNVYTYTSLISG-QRVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVL 410

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           +     D AL +F+ M      PN  +Y  L+ G C  G   +   +L  M++    P  
Sbjct: 411 MENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTL 470

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +  + + G  C SG  + A  VL+ M       +   Y  LI  FCK    + A  + +
Sbjct: 471 VTYNIIIKGY-CDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFN 529

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNL 420
           +++++ +   P         +Y  +I   C + +   A     ++ + G    V  +N L
Sbjct: 530 EMMDRGLC--PNEV------TYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G +K+ N   A E+ K+M    +  D   Y  +I      G    A    + M++ G 
Sbjct: 582 IHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    + S++++L ++GRV+ A  +   + ++G+  +     K++E  +M G V+ A  
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701

Query: 541 RIDLMMQSGSVPNFDS 556
            +  M+ +G  P   +
Sbjct: 702 FLGEMINAGCQPTLQT 717



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 134/572 (23%), Positives = 224/572 (39%), Gaps = 100/572 (17%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           ++ + N L  +     AL F   + R G+      T    I  L  +G++  A  I +DM
Sbjct: 301 YSTLINGLCNSGRVNEALDFISEMTRHGVL-PTVHTFTAPIVALCDMGRIEDAWKIFIDM 359

Query: 83  PKKGVQWDEDMFEVLIES-------------YGKKGIVQESVK----------------- 112
            KKG + +   +  LI                 + G+V  +V                  
Sbjct: 360 KKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSA 419

Query: 113 --IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             +F++M + G   +  SY+ L +     G    A      ML     PT  TYN+++ G
Sbjct: 420 LIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKG 479

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           +  S   + AIR  E MK+ G   D  +Y  +I+G+ +  KM+ A  +F EM ++ + P 
Sbjct: 480 YCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPN 539

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
            ++YT +I GY   E+ D A R+ + MK    +PN  TY  L+ GL              
Sbjct: 540 EVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL-------------- 585

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
                                  K  + + A ++ K M+   I  +   Y  +I   C  
Sbjct: 586 ----------------------TKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNN 623

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
                A+++ +K+V+   +            +Y+ +IQ L   G+  +AE  F +L K+G
Sbjct: 624 GAIPLALEMFNKMVKHGCL--------PNLHTYSSLIQALGQEGRVEEAEEMFSELKKQG 675

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK------- 462
           ++ D V +  +I      G  D AF+ +  M   G       Y  LI+    +       
Sbjct: 676 LIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLV 735

Query: 463 GEPADAKTAL--DSMI-EDGHSPASS------------LFRSVMESLFEDGRVQTASRVM 507
             P  A T+   D +I +D  S  SS            L+ +++  L   GR   A+ + 
Sbjct: 736 ALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLY 795

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           +SMV +    N D     L +LL    V+ A+
Sbjct: 796 RSMVSQSQCPNQDTYKHFLISLLRALKVDLAM 827



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 23/258 (8%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A + F  +++ GL   D  T++KMIE+    GK++ A   L +M   G Q     ++V
Sbjct: 662 EEAEEMFSELKKQGLI-PDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDV 720

Query: 97  LIESYGKKGIVQE--------SVKIFD--------------IMKQLGVERSVKSYDALFK 134
           LI+    + +  +        S   FD               + +L  E S + YDAL  
Sbjct: 721 LIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLS 780

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + R GR+  A   +  M+S+   P + TY   L     +LK++ A+  F+ M  +   L
Sbjct: 781 RLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCEL 840

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
            +  Y  +I    +  +  EA  +F +M  + +    I +T +I G +     D  +   
Sbjct: 841 HLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFL 900

Query: 255 DEMKSFDVKPNAVTYTAL 272
             M++    P++   T L
Sbjct: 901 HIMETNRRNPSSHARTIL 918



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 41/235 (17%)

Query: 420 LIRGHSKEGNPDSAFEI-VKIMGRRGVPRDAD-AYICLIESYLRKGEPADAKTALDSMIE 477
           L R HS +  PD+  ++ ++++  R  P     A I +I+S   K E   A   LD   +
Sbjct: 127 LSREHSHKYGPDTFAKVAMRLLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQ 186

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVM---KSMVEKGVKENLDLVAKILEALLMRGH 534
            G  P   LF +    L +  ++   S VM     ++ +G++ NL +   ++ AL   G+
Sbjct: 187 RG--PKMGLF-TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGN 243

Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           V +A   I+ + +SG  P+  +  S+            +L +C  RD           LD
Sbjct: 244 VRDAESIINKVFKSGMKPDTFTYTSM------------ILGYCRNRD-----------LD 280

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           +         A+ I  ++ E+G   +  +   LI GL   G   +A D +S M R
Sbjct: 281 S---------AFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTR 326



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/215 (17%), Positives = 88/215 (40%), Gaps = 3/215 (1%)

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           ++I+  S +     A   + +  +RG       Y  L+    +    +        ++ +
Sbjct: 163 HMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILRE 222

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P   ++ SV+ +L +DG V+ A  ++  + + G+K +      ++        ++ A
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
               + M + G  PN   + +L++ L   G+   A+  +        +  + ++   + A
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVA 342

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           L   G+  +A+ I   + +KG   +  +   LI+G
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG 377


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 133/601 (22%), Positives = 272/601 (45%), Gaps = 61/601 (10%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR---CILLDMPKKG-VQWD 90
           N E  L+ F    +   F  D + + KM+ IL R       +   C L+ +   G V W 
Sbjct: 83  NPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWG 142

Query: 91  E------------DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           E             +F+++++ Y +KG+V+ ++ +FD M   G   S+ S ++L   ++R
Sbjct: 143 ELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVR 202

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR-GISLDVV 197
           +G   +A   +++M+S  + P   T ++++  +  S  ++ A+ F ++ +S  G+ L+VV
Sbjct: 203 KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVV 262

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN++INGY     ++   ++   M E+ +   V++YT++IKGY      ++A  +F+ +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSG 316
           K   +  +   Y  L+ G C  G++ +  +V   M+E  I  + N+     L+   CKSG
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE--IGVRTNTTICNSLINGYCKSG 380

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L  A  +   M   S+  +   Y  L++ +C+A   D A+KL D++ +KE++  P    
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVV--PT--- 435

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                +YN +++     G        ++ ++K+GV  D ++ + L+    K G+ + A +
Sbjct: 436 ---VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           + + +  RG+  D      +I    +  +  +AK  LD++      PA   ++++    +
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYY 552

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
           + G ++ A  V + M  KG+   +++   ++       H+ +    +  +   G  P   
Sbjct: 553 KVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT-- 610

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
                                         +A+Y  ++      G    AY+  F+++EK
Sbjct: 611 ------------------------------VATYGALITGWCNIGMIDKAYATCFEMIEK 640

Query: 616 G 616
           G
Sbjct: 641 G 641



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 142/617 (23%), Positives = 269/617 (43%), Gaps = 53/617 (8%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G++ +   +  LI  Y   G V+   ++  +M + GV R+V +Y +L K   ++G    A
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
           +  F  +  + +   +H Y V++ G+  + ++  A+R  ++M   G+  +    N++ING
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
           Y +  ++ EAE++F+ M + +++P   +Y T++ GY      D+AL++ D+M   +V P 
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            +TY  LL G    G   +V  + + M++R +   + S    LL    K G  N A  + 
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISC-STLLEALFKLGDFNEAMKLW 494

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
           + ++   + T+     ++I   CK E  + A ++LD +     I R +  +     +Y  
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN----IFRCKPAV----QTYQA 546

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +       G   +A      + +KG+   +  +N LI G  K  + +   ++V  +  RG
Sbjct: 547 LSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARG 606

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +      Y  LI  +   G    A      MIE G +   ++   +  SLF   ++  A 
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEAC 666

Query: 505 RVMKSMVE--------KGVKENLDLVA-------KILEA--------------------- 528
            +++ +V+        + +KE L+  A       KI E+                     
Sbjct: 667 LLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAI 726

Query: 529 --LLMRGHVEEALGRI-DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
             L   G +E+A     DL+     +P+   +  L+   +  G    A  L D    +  
Sbjct: 727 AGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGI 786

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADI 642
           I ++ +Y  ++  L   G    A  +L K+ +KG   +  + + LI GL + GN  +A  
Sbjct: 787 IPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMR 846

Query: 643 L-SRMIRGEMSRGSQKE 658
           L  +MI   + RGS K+
Sbjct: 847 LKEKMIEKGLVRGSDKQ 863



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 139/597 (23%), Positives = 247/597 (41%), Gaps = 88/597 (14%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+   + G +  A  +   + +K +  D+ M+ VL++ Y + G ++++V++ D M
Sbjct: 298 TYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM 357

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            ++GV  +    ++L     + G+ + A++ F++M    ++P  HTYN ++ G+  +  +
Sbjct: 358 IEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 417

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNR----------------------------- 208
           + A++  + M  + +   V+TYN ++ GY+R                             
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 477

Query: 209 ----FK--KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
               FK    +EA KL+  +  + +    I+   MI G   +E+ ++A  I D +  F  
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           KP   TY AL  G    G + E   V   M  + I P    ++  L+    K  HLN  A
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTI-EMYNTLISGAFKYRHLNKVA 596

Query: 323 D-VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA-----------IKL----------- 359
           D V++   R   PT A  YG LI  +C   M D+A           I L           
Sbjct: 597 DLVIELRARGLTPTVAT-YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANS 655

Query: 360 ---LDKLVEKEIILRPQSTLDMEASSYNPMIQHL------CHNGQTGKAEIFFRQLMKKG 410
              LDK+ E  ++L+     D+    Y  + + L      C   Q     +      K  
Sbjct: 656 LFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLL 715

Query: 411 VLDPVAFNNLIRGHSKEGNPDSAFEIVK--IMGRRGVPRDADAYICLIESYLRKGEPADA 468
           V + + +N  I G  K G  + A ++    +   R +P D   Y  LI      G+   A
Sbjct: 716 VPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP-DEYTYTILIHGCAIAGDINKA 774

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
            T  D M   G  P    + ++++ L + G V  A R++  + +KG+  N    A     
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN----AITYNT 830

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
           L            ID +++SG+V     L   + EKG    + K  D  + ++ ++D
Sbjct: 831 L------------IDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQGDVDIPKEVVLD 875


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 215/478 (44%), Gaps = 36/478 (7%)

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+A+ + + RR     A RY + M+  G  P  +T+N ++ G+  + +++ A   F+ M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
             RG + DVV+Y  +I G+    ++DEA +LF EM     +P +  Y  ++KG     R 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           ++ L +   MK    +P+   Y A++   C   K  E +++L+EM E+ + P   +    
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTC-TA 187

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL---- 363
           ++   CK G ++ A  VL+ M           Y  L++ FC      +A+ LL+K+    
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247

Query: 364 -----VEKEIILRPQST------------------LDMEASSYNPMIQHLCHNGQTGKAE 400
                V   +++R Q                    L  +  +YN +I  LC +G+T +A 
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307

Query: 401 IFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
             F  L  +G+  + V FN+LI G  K G  D A++ ++ M   G   D   Y   IE  
Sbjct: 308 SLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHL 367

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            +     +  + +  M++    P++  +  V+  L ++      +R    MV  G   ++
Sbjct: 368 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 427

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
                 + A  + G + EA   +  M ++G   +   +++L+   +  G+T  AV +L
Sbjct: 428 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 485



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 222/490 (45%), Gaps = 20/490 (4%)

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           TYN ++        L +A+R+   M   G   D  T+N++I GY R  ++D A  LF +M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
             +     V+SY  +I+G+    R D+A+ +F EM     +P+   Y AL+ GLC AG+ 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E   +LR M E    P   + +  ++  +C       A ++L+ M    +         
Sbjct: 129 EEGLLMLRRMKELGWRPSTRA-YAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           +I  +CK      A+++L+ +  K    +P         +YN ++Q  C+ G+  KA   
Sbjct: 188 VINAYCKEGRMSDALRVLELM--KLRGCKPN------VWTYNALVQGFCNEGKVHKAMAL 239

Query: 403 FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
             ++   GV  D V +N LIRG   +G+ +SAF ++++M   G+  D   Y  LI +  +
Sbjct: 240 LNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 299

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
            G    A +  DS+   G  P +  F S++  L + G+V  A + ++ MV  G   +   
Sbjct: 300 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYT 359

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLL-SVLSEKGKTIAAVKLLDFC 577
            +  +E L      +E L  I  M+Q    P   N+  ++  +L E+   + A    +  
Sbjct: 360 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM- 418

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
           +   C  D+ +Y   + A    G+   A ++L ++ + G   D  + + L+ G    G T
Sbjct: 419 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 478

Query: 638 KQA-DILSRM 646
             A  IL +M
Sbjct: 479 DHAVSILKQM 488



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 260/600 (43%), Gaps = 55/600 (9%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  ++  +IE     G+++ A  +  +M     Q D  M+  L++   K G  +E +
Sbjct: 77  FAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGEEGL 132

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            +   MK+LG   S ++Y A+        +   A+    +M  +G+ P   T   ++  +
Sbjct: 133 LMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 192

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               ++  A+R  E MK RG   +V TYN ++ G+    K+ +A  L  +M+   + P  
Sbjct: 193 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDA 252

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++Y  +I+G       + A R+   M+   +  +  TY AL+  LC  G+  +   +   
Sbjct: 253 VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS 312

Query: 292 MVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK- 349
           +  R I P  N+V F  L+   CKSG ++ A   L+ M+      +   Y   IE+ CK 
Sbjct: 313 LETRGIKP--NAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 370

Query: 350 ----------AEMYDRAIK--------LLDKLV-EKEIILRPQSTLDMEASSYNPMI--- 387
                      EM  + +K        ++ KL+ E+   L  ++  +M +S  NP +   
Sbjct: 371 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 430

Query: 388 ----QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
               +  C  G+  +AE    ++ K GV +D +A+N L+ GH+  G  D A  I+K M  
Sbjct: 431 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 490

Query: 443 -RGVPRDADAYIC--------LIESYL--------RKGEPADAKTALDSMIEDGHSPASS 485
              VP     +I         L+E  L        +  E  D     D M ++   P S 
Sbjct: 491 VASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSG 550

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            + S++E   EDGR + A+ ++  M E  +  N D+   ++          +A   +  M
Sbjct: 551 TYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSM 610

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           +Q G +P+   +  LLS L  +G+T  A ++      +D   D   ++ ++D L+  G +
Sbjct: 611 IQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHS 670



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 148/640 (23%), Positives = 272/640 (42%), Gaps = 37/640 (5%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V   L    +   AL++   + R+G +  D  T   +I    R  +++ AR +   M
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSG-WRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           P +G   D   +  LIE + + G + E+V++F  M Q      +  Y AL K + + GR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                   +M   G  P+   Y  ++       K + A    ++M  +G++  VVT   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           IN Y +  +M +A ++   MK +  +P V +Y  +++G+    +   A+ + ++M+   V
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+AVTY  L+ G C  G +    ++LR ++E      D   +  L+   CK G  + A 
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLR-LMEGDGLIADQYTYNALINALCKDGRTDQAC 307

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +  ++    I   A  +  LI   CK+   D A K L+K+V         +    +  +
Sbjct: 308 SLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMV--------SAGCTPDTYT 359

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHS--KEGNPDSAFEIVKIM 440
           Y+  I+HLC    + +   F  ++++K V  P   N  I  H   KE N          M
Sbjct: 360 YSSFIEHLCKMKGSQEGLSFIGEMLQKDV-KPSTVNYTIVIHKLLKERNYGLVARTWGEM 418

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G   D   Y   + +Y  +G   +A+  L  M ++G +  +  + ++M+     G+ 
Sbjct: 419 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 478

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL-----------------GRID 543
             A  ++K M       N      +L  L+    VE+ L                 G  D
Sbjct: 479 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 538

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           +M ++  +PN   + S+L   SE G+T  A  L+         ++   Y  ++     + 
Sbjct: 539 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 598

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           + L+A+ ++  +++ G +    S   L++GL  EG T +A
Sbjct: 599 RYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKA 638



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 196/471 (41%), Gaps = 35/471 (7%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAK----NSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           L NK+R      D  + YN+L   +    + E A +  R +E  GL   D+ T+  +I  
Sbjct: 239 LLNKMRVCGVNPD-AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA-DQYTYNALINA 296

Query: 66  LGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           L + G+ + A C L D +  +G++ +   F  LI    K G V  + K  + M   G   
Sbjct: 297 LCKDGRTDQA-CSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTP 355

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
              +Y +  + + +         +  +ML + ++P+   Y +++             R +
Sbjct: 356 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTW 415

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M S G + DVVTY T +  Y    +++EAE +  EM +  +    ++Y T++ G+ ++
Sbjct: 416 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI 475

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALL-----------------PGLCDAGKMVEVQK 287
            + D A+ I  +M S    PN  TY  LL                  G+  A ++ +V  
Sbjct: 476 GQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFG 535

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +   M +    P   +    L G   + G    A  ++  M   SI      Y  L+  F
Sbjct: 536 LFDVMKKNEFLPNSGTYSSILEGFS-EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCF 594

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQL 406
           CK++ Y  A  L+  +++   I  P         SY  ++  L   GQT KA EIF    
Sbjct: 595 CKSKRYLDAWVLVCSMIQHGFI--PH------LMSYQHLLSGLICEGQTDKAKEIFMNSR 646

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
            K    D + +  +I G  K+G+ D + E++ ++ R         Y  L E
Sbjct: 647 WKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 697



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 8/273 (2%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +I+ LC       A  +   +++ G   D   FN+LI G+ +    D A ++   M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             RG  +D  +Y  LIE +   G   +A      M      P   ++ ++++ L + GR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRG 128

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
           +    +++ M E G + +    A +++        +EA   +  M + G  P   +  +V
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 561 LS---EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           ++   ++G+   A+++L+    R C  ++ +Y  ++      GK   A ++L K+   G 
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
             D  + + LI G   +G+ + A  L R++ G+
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 281



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 95/264 (35%), Gaps = 58/264 (21%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+LN A  +L++M K GV  D   +  L++ +   G    +V I   +KQ+    SV + 
Sbjct: 441 GRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI---LKQMTSVASVPNQ 497

Query: 130 DALFKLILRRGRYMMAKRY--------------------FNKMLSEGIEPTRHTYNVMLW 169
              F L+    R  + +                      F+ M      P   TY+ +L 
Sbjct: 498 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 557

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK------------------ 211
           GF    + E A      MK   ISL+   Y  ++  + + K+                  
Sbjct: 558 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 617

Query: 212 -----------------MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
                             D+A+++F   + K+  P  I +  +I G +    +D +  + 
Sbjct: 618 HLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 677

Query: 255 DEMKSFDVKPNAVTYTALLPGLCD 278
             ++  + +P+  TY  L   L D
Sbjct: 678 IMLERMNCRPSHQTYAMLTEELPD 701


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 218/505 (43%), Gaps = 19/505 (3%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M   G+   V +   +   +    R   A     K+L  G +P   T+  ++ G  +  K
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +  A+  F+ M   G   +VVTY T+ING  +      A +L   M++ N +P V+ ++T
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I       +  +A  IF EM +  + PN VTY +L+ GLC   +   V  ++ EMV+  
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P D      ++   CK G +  A DV+  MI   +      Y  L++  C     D A
Sbjct: 276 IMP-DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
           +K+ D +V K+ +            SYN +I   C      KA   F + M +  L P  
Sbjct: 335 VKVFDTMVHKDCV--------ANVISYNTLINGYCKIQSVDKAMYLFEE-MSRQELTPNT 385

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +N LI G    G    A  +   M  RG   D   Y  L   YL K    D   AL  
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL-SDYLCKNRHLDKAMALLK 444

Query: 475 MIEDGH-SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            IE  +  P   ++ ++++ +   G ++ A  +  ++  KG++ N+     ++  L  +G
Sbjct: 445 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 504

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLS----EKGKTIAAVKLLDFCLGRDCIIDLASY 589
            + EA      M ++G  PN D   ++++       + +  ++LL+  L R   +D+++ 
Sbjct: 505 LLAEASKLFSEMNKNGCSPN-DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTT 563

Query: 590 EKVLDALLAAGKTLNAYSILFKIME 614
             ++  L   G   +   IL K ++
Sbjct: 564 TLLVGMLSDDGLDQSVKQILCKYVQ 588



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 217/522 (41%), Gaps = 32/522 (6%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   FN+ML +   P+   +N +L     +    T +     M S GI  DV T   +IN
Sbjct: 54  ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 113

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
                 ++D A    A++ +   +P   ++TT+I+G     +  +AL +FD+M     +P
Sbjct: 114 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQP 173

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N VTY  L+ GLC  G      ++LR M +    P +  VF  L+   CK   +  A ++
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP-NVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 325 LKAMIRLSIPTEAGHYGILIENFCK-----------AEMYDRAI--------KLLDKLVE 365
              MI   I      Y  LI   CK            EM D  I         ++D L +
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 292

Query: 366 KEIILRPQSTLDM--------EASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVA 416
           + ++      +DM           +YN ++   C   +   A ++F   + K  V + ++
Sbjct: 293 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N LI G+ K  + D A  + + M R+ +  +   Y  LI      G   DA +    M+
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P    +R++ + L ++  +  A  ++K++       ++ +   IL+ +   G +E
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           +A      +   G  PN   ++ ++  L ++G    A KL        C  +  +Y  + 
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
              L   + L    +L +++ +G   D  ++  L+  L+ +G
Sbjct: 533 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 215/516 (41%), Gaps = 51/516 (9%)

Query: 33  AKNSEHA--LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           AK   H+  L   R ++  G+   D  T   +I  L  + +++ A   L  + K G Q D
Sbjct: 81  AKTKHHSTLLSLSRQMDSFGI-PPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPD 139

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
              F  LI     +G + E++ +FD M   G + +V +Y  L   + + G    A R   
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 199

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
            M     +P    ++ ++       ++  A   F +M ++GIS ++VTYN++I+G  +  
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +      L  EM +  I P V +  T++          +A  + D M    V+PN VTY 
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYN 319

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           AL+ G C   ++    KV   MV                       H +  A+V+     
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMV-----------------------HKDCVANVIS---- 352

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
                    Y  LI  +CK +  D+A+ L +++  +E  L P +       +YN +I  L
Sbjct: 353 ---------YNTLINGYCKIQSVDKAMYLFEEMSRQE--LTPNTV------TYNTLIHGL 395

Query: 391 CHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           CH G+   A   F +++ +G + D V +  L     K  + D A  ++K +       D 
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  +++   R GE  DA+    ++   G  P    +  ++  L + G +  AS++   
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
           M + G   N D    ++    +R +  EAL  I+L+
Sbjct: 516 MNKNGCSPN-DCTYNLITRGFLRNN--EALRTIELL 548



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/454 (21%), Positives = 181/454 (39%), Gaps = 14/454 (3%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           ++NT  +    F  +DEA   F  M  K   P+ + +  ++      +     L +  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            SF + P+  T   ++  LC   ++      L ++++    P D + F  L+   C  G 
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQP-DATTFTTLIRGLCVEGK 155

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  +   MI          YG LI   CK      AI+LL  +         Q    
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM--------EQGNCQ 207

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
                ++ +I  LC + Q  +A   F +++ KG+  + V +N+LI G  K         +
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +  M    +  D      ++++  ++G  A+A   +D MI  G  P    + ++M+    
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
              V  A +V  +MV K    N+     ++        V++A+   + M +    PN   
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +++L+  L   G+   A+ L    + R  I DL +Y  + D L        A ++L  I 
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
                 D +    ++ G+ + G  + A D+ S +
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 208/423 (49%), Gaps = 13/423 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T +K + + G+V K  H    LL    +G+++D+  +  LI    K G  + ++K+   +
Sbjct: 134 TLIKGLCLKGQVNKALHFHDKLL---AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI 190

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
                + +V+ Y+ +   + +      A   F++M ++GI     TY  +++GF ++ KL
Sbjct: 191 DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKL 250

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + AI    +M  + I+ +V TYN +++   +  K+ EA+ + A M +  ++P VI+Y+T+
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTL 310

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + GY  V     A  +F+ M    V P+  +YT L+ G C    + E   + +EM ++ +
Sbjct: 311 MDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P   + +  L+   CKSG ++   D++  M    IP     Y  LI+  CK    DRAI
Sbjct: 371 VPGIVT-YSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAI 429

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            L +K+ ++ I  RP S       ++  ++  LC  G+   A+  F+ L+ KG  LD   
Sbjct: 430 ALFNKMKDQGI--RPCSF------TFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYK 481

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N +I GH K+G  + A  ++  M   G   +A  +  +I +  +K E   A+  L  MI
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMI 541

Query: 477 EDG 479
             G
Sbjct: 542 CRG 544



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 207/460 (45%), Gaps = 31/460 (6%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           KG+Q D     +LI  +   G +     +   + + G +    ++  L K +  +G+   
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNK 147

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  + +K+L++GI+  + +Y  ++ G         AI+    +  R    +V  YNT+I+
Sbjct: 148 ALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIID 207

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              +++ + EA  LF+EM  K I   V++YTT+I G+    +  +A+ + +EM    + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINP 267

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N  TY  L+  LC  GK+ E + VL  M++  + P D   +  L+        L  A  V
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKP-DVITYSTLMDGYFLVYELKKAQHV 326

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLDMEAS 381
             AM  + +  +   Y ILI  FCK +M D A+ L  ++ +K +   I+   S +D    
Sbjct: 327 FNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386

Query: 382 S------------------------YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           S                        YN +I  LC NG   +A   F ++  +G+  P +F
Sbjct: 387 SGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI-RPCSF 445

Query: 418 NN--LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
               L+ G  K G    A E  + +  +G   D   Y  +I  + ++G   +A T L  M
Sbjct: 446 TFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKM 505

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            E+G  P +  F  ++ +LF+      A ++++ M+ +G+
Sbjct: 506 EENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 174/356 (48%), Gaps = 9/356 (2%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           E +  +I+ L +   ++ A  +  +M  KG+  D   +  LI  +     ++E++ + + 
Sbjct: 200 EMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNE 259

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M    +  +V +Y+ L   + + G+   AK     ML   ++P   TY+ ++ G+FL  +
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYE 319

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           L+ A   F  M   G++ DV +Y  +ING+ + K +DEA  LF EM +KN+ P +++Y++
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G     R      + DEM+   +  N +TY +L+ GLC  G +     +  +M ++ 
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P   + F  LL   CK G L  A +  + ++      +   Y ++I   CK  + + A
Sbjct: 440 IRPCSFT-FTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEA 498

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           + +L K+ E   +  P       A +++ +I  L    +  KAE   RQ++ +G+L
Sbjct: 499 LTMLSKMEENGCV--P------NAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 116/510 (22%), Positives = 227/510 (44%), Gaps = 16/510 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML     P    +N +L  F       TA+     ++ +GI  D++T N +IN +  
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++     + A++ ++  +P  I++TT+IKG     + + AL   D++ +  +K + V+
Sbjct: 107 MGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVS 166

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ G+C  G      K++R++  R   P +  ++  ++   CK   ++ A  +   M
Sbjct: 167 YGTLINGVCKIGDTRGAIKLVRKIDGRLTKP-NVEMYNTIIDALCKYQLVSEAYGLFSEM 225

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               I  +   Y  LI  FC A     AI LL+++V K        T++    +YN ++ 
Sbjct: 226 TAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK--------TINPNVYTYNILVD 277

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G+  +A+     ++K  V  D + ++ L+ G+        A  +   M   GV  
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D  +Y  LI  + +     +A      M +    P    + S+++ L + GR+     ++
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEK 564
             M ++G+  N+     +++ L   GH++ A+   + M   G  P    F  LL  L + 
Sbjct: 398 DEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKG 457

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G+   A +     L +   +D+  Y  +++     G    A ++L K+ E G V +  + 
Sbjct: 458 GRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTF 517

Query: 625 DKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           D +I  L ++    +A+   +++R  + RG
Sbjct: 518 DIIINALFKKDENDKAE---KLLRQMICRG 544


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 150/585 (25%), Positives = 264/585 (45%), Gaps = 44/585 (7%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           +AE+A++  L   +  ++ + + +     L  A   E A    R +   G F  D  T+ 
Sbjct: 431 LAEKAYSEMLATGV--VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG-FIPDTSTYS 487

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K++  L    K+  A  +  +M + G+  D   + ++++S+ K G+++++ K F+ M+++
Sbjct: 488 KVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G   +V +Y AL    L+  +   A   F  MLSEG  P   TY+ ++ G   + ++E A
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKA 607

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            + FE M       DV  Y         FK+ D+         + +  P V+ Y  ++ G
Sbjct: 608 CQIFERMCGSKDVPDVDMY---------FKQYDD---------DNSERPNVVIYGALLDG 649

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +  + R ++A ++ D M     +PN + Y AL+ GLC  GK+ E Q+V  EM E   P  
Sbjct: 650 FCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPAT 709

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
             + +  L+    K    + A+ VL  M+  S       Y  +I+  CK    D A KL+
Sbjct: 710 LYT-YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 768

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK---KGVL-DPVA 416
             + EK    +P         +Y  MI      G+ GK E     L +   KGV  + V 
Sbjct: 769 QMMEEKGC--QPNVV------TYTAMIDGF---GRIGKIETCLELLERMGSKGVAPNYVT 817

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  LI    K G  D A  +++ M +   P  A  Y  +IE +    E  ++   LD + 
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIG 875

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV--EKGVKENLDLVAKILEALLMRGH 534
           +D  +P  SL+R ++++L +  R++ A R+++ +      + +       ++E+L +   
Sbjct: 876 QDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 935

Query: 535 VEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDF 576
           V++A      M + G +P    F SL+  L    K   A+ LLDF
Sbjct: 936 VDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDF 980



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 134/563 (23%), Positives = 255/563 (45%), Gaps = 38/563 (6%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K +  M   GV  +  +  +  + +   G+Y  A     +M+ +G  P   TY+ +L   
Sbjct: 434 KAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYL 493

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + K+E A   FE+MK  G+  DV TY  M++ + +   +++A K F EM+E    P V
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++YT +I  Y+  ++   A  +F+ M S    PN VTY+AL+ G C AG+M +  ++   
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFER 613

Query: 292 M--------VERYIPPKDNS--------VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           M        V+ Y    D+         ++  LL   CK   +  A  +L AM       
Sbjct: 614 MCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEP 673

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI-QHLCHNG 394
               Y  LI+  CK    D A ++  ++ E        +TL     +Y+ +I ++     
Sbjct: 674 NQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGF----PATL----YTYSSLIDRYFKVKR 725

Query: 395 QTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
           Q   +++  + L      + V +  +I G  K G  D A++++++M  +G   +   Y  
Sbjct: 726 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 785

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I+ + R G+       L+ M   G +P    +R +++   ++G +  A  +++ M +  
Sbjct: 786 MIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 845

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE---KGKTIA-A 570
              +     K++E         E+LG +D + Q  + P F SL  +L +   K + +  A
Sbjct: 846 WPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAP-FLSLYRLLVDNLIKAQRLEMA 902

Query: 571 VKLL-DFCLGRDCIIDLAS-YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
           ++LL +       ++D +S Y  ++++L  A K   A+ +  ++ +KG + + ++   LI
Sbjct: 903 LRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLI 962

Query: 629 AGLNQEGNTKQA----DILSRMI 647
            GL +     +A    D +S M+
Sbjct: 963 KGLFRNSKISEALLLLDFISHMV 985



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 132/704 (18%), Positives = 270/704 (38%), Gaps = 75/704 (10%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           + ++ Q  +R    +   +LV  VL   +     + FF W  R   + H    +  ++++
Sbjct: 115 FGSKSQKFLRQFREKLSESLVIEVLRLIERPSAVISFFVWAGRQIGYKHTSPVYNALVDL 174

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           + R         +L  +     +   +   VL+  Y + G    +++    +K      S
Sbjct: 175 IVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPS 234

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             +Y+ L +  L+      A     +M    +     T     +      K   A+    
Sbjct: 235 RSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL-- 292

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            M++     D V Y  +I+G       +EA      M+  +  P V++Y+T++ G +  +
Sbjct: 293 -METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKK 351

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           +     R+ + M      P+   + +L+   C +G      K+L++MV+    P    V+
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTP-GYVVY 410

Query: 306 MKLLGVQCK-----SGH-LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
             L+G  C      S H L  A      M+   +     +        C A  Y++A  +
Sbjct: 411 NILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSV 470

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFN 418
           + +++ +  I  P      + S+Y+ ++ +LC+  +   A + F ++ + G V D   + 
Sbjct: 471 IREMIGQGFI--P------DTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            ++    K G  + A +    M   G   +   Y  LI +YL+  + + A    ++M+ +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMV-----------------EKGVKENLDL 521
           G  P    + ++++   + G+++ A ++ + M                  +   + N+ +
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVI 642

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK------------ 566
              +L+       VEEA   +D M   G  PN   +D+L+  L + GK            
Sbjct: 643 YGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMS 702

Query: 567 ---------TIA--------------AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
                    T +              A K+L   L   C  ++  Y +++D L   GKT 
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 762

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
            AY ++  + EKG   +  +   +I G  + G  +   ++L RM
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERM 806


>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
 gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
          Length = 823

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 127/572 (22%), Positives = 260/572 (45%), Gaps = 37/572 (6%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG-KLNHARCIL 79
           + +  + ++L  A+  +  +  F  ++R G    +  T+  M+++ G+ G   +  + + 
Sbjct: 214 YAYTSLISILSRARRFDEGITLFETMQREGQ-RGNAVTYNVMLDLYGKRGDSWDRIQSLF 272

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M    +  D+  +  +I +  +    QE++++F  MK+ G   +  +Y+AL  +  + 
Sbjct: 273 QEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKG 332

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G +  A     +M + GI P   TYN ++  +  +   + A    + + S+G+  D  TY
Sbjct: 333 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTY 392

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            T+I+ +NR ++ ++A + F EM++ N  P +++Y  +I  Y  +E+ DD +++F  M+ 
Sbjct: 393 CTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQE 452

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHL 318
            +  P+ VT+ +LL    + G + EV  V REM    Y+P  D   F  L+    + G++
Sbjct: 453 KNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVD--TFNILIECYGRCGYV 510

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL-- 376
           + + D+ K ++R  +      +  L+ +  +   + +  K+  ++ E  + L        
Sbjct: 511 DYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGL 570

Query: 377 ------------------DMEASSYNPMIQHLCHN--------GQTGKAEIFFRQLMKKG 410
                             ++E S+  P+   LC          G   +A++   QL   G
Sbjct: 571 IHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNG 630

Query: 411 -VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
              D   FN +I   +K G  + A ++++ + +  +  D   Y CL+  Y R+G    A+
Sbjct: 631 HSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAE 690

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
             +  M   G +P    + +++ S  + GR+  A+RV   MV   V+ +      ++ + 
Sbjct: 691 EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSY 750

Query: 530 LMRGHVEEALGRIDLMMQSGSVP---NFDSLL 558
              G  +EAL  I+ M + G  P    F +LL
Sbjct: 751 SSLGLYKEALSVIEYMTEHGCQPTQITFKALL 782



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 84/174 (48%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           + G  N A+  L  +   G   D  +F  +I    K+G ++ +VK+ + +++  ++    
Sbjct: 612 KCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGV 671

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L  +  R G Y  A+   ++M   G  P   TYN +L+ +    +++ A R F DM
Sbjct: 672 TYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM 731

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            +  +  D  T+NT++  Y+      EA  +   M E   +PT I++  ++ GY
Sbjct: 732 VAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 785



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 88/183 (48%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           + +  + +Y K G+  E+    + +   G    +K ++A+  +  +RG    A +   ++
Sbjct: 602 LCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEI 661

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
               ++P   TYN ++  +        A     +M+  G + +++TYNT++  Y +  +M
Sbjct: 662 RKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRM 721

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D+A ++F +M    + P   ++ T++  Y ++    +AL + + M     +P  +T+ AL
Sbjct: 722 DDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKAL 781

Query: 273 LPG 275
           L G
Sbjct: 782 LDG 784



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 2/148 (1%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI +  + G +  A  +L ++ K  ++ D   +  L+  YG++G+  ++ ++   M++ G
Sbjct: 641 MISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAG 700

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL-ETA 180
              ++ +Y+ L     + GR   A R F  M++  + P   T+N ++ G + SL L + A
Sbjct: 701 KAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLV-GSYSSLGLYKEA 759

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNR 208
           +   E M   G     +T+  +++GYNR
Sbjct: 760 LSVIEYMTEHGCQPTQITFKALLDGYNR 787



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 109/283 (38%), Gaps = 14/283 (4%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI    +A  +D  I L + +         +      A +YN M+      G +   
Sbjct: 216 YTSLISILSRARRFDEGITLFETM--------QREGQRGNAVTYNVMLDLYGKRGDSWDR 267

Query: 400 EIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
                Q MK   + P    +N +I    +  +   A  + + M   G   +   Y  L++
Sbjct: 268 IQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLD 327

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
            Y + G   +A   L  M   G SP    +  ++ +    G    A+ + KS++ KG+  
Sbjct: 328 VYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCP 387

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           +      ++ A       E+AL     M ++   PN   ++ L+ +     K    +K+ 
Sbjct: 388 DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVF 447

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
            F   ++C  DL ++  +L +    G  L   S +F+ M++ G
Sbjct: 448 KFMQEKNCTPDLVTWNSLLKSFGNCG-MLTEVSNVFREMKRAG 489



 Score = 42.4 bits (98), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 9/136 (6%)

Query: 45  WVERA-GLFNHDRETHLK--------MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           W+ERA  L    R+  LK        ++ + GR G    A  ++ +M + G   +   + 
Sbjct: 650 WIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYN 709

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            L+ SY K G + ++ ++F  M    V     +++ L       G Y  A      M   
Sbjct: 710 TLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEH 769

Query: 156 GIEPTRHTYNVMLWGF 171
           G +PT+ T+  +L G+
Sbjct: 770 GCQPTQITFKALLDGY 785


>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
 gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 535

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 229/482 (47%), Gaps = 28/482 (5%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGL-FNHDRETHLKM 62
           + W  RL          F   LV +++   +N + ALQ F +  ++   F H+ +T+  +
Sbjct: 41  KPWPQRL----------FPKRLV-SMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSI 89

Query: 63  IEILGRVGKLNHARCILLDMPKK--GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +  L R    +    ++ D+      ++  E++F  L+ +YG  G  + S++IF  +   
Sbjct: 90  LFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDF 149

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYF-NKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           GV+RSV+S + L  ++++  R+ +    F N   S GI P   T N+++        +E+
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A +  +++ S G+  ++VTY T++ GY     M+ A+++  EM ++   P   +YT ++ 
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY  + R  +A  + D+M+  +++PN VTY  ++  LC   K  E + +  EM+ER   P
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D+S+  K++   C+   ++ A  + + M++ +   +      LI   CK      A KL
Sbjct: 330 -DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKL 388

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-- 417
            D+  +  I     S L     +YN +I  +C  G+  +A   +  + ++    P AF  
Sbjct: 389 FDEFEKGSI----PSLL-----TYNTLIAGMCEKGELTEAGRLWDDMYERKC-KPNAFTY 438

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI G SK GN      +++ M   G   +   ++ L E   + G+  DA   +   + 
Sbjct: 439 NVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVM 498

Query: 478 DG 479
           +G
Sbjct: 499 NG 500



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 179/387 (46%), Gaps = 12/387 (3%)

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK- 225
           +L  + L+ + E+++R F  +   G+   V + NT++N   + ++ D    +F   KE  
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I P + +   ++K        + A ++ DE+ S  + PN VTYT +L G    G M   
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           ++VL EM++R   P D + +  L+   CK G  + AA V+  M +  I      YG++I 
Sbjct: 246 KRVLEEMLDRGWYP-DATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CK +    A  + D+++E+  +  P S+L  +      +I  LC + +  +A   +R+
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFM--PDSSLCCK------VIDALCEDHKVDEACGLWRK 356

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           ++K   + D    + LI    KEG    A ++     +  +P     Y  LI     KGE
Sbjct: 357 MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIAGMCEKGE 415

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +A    D M E    P +  +  ++E L ++G V+   RV++ M+E G   N      
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSV 551
           + E L   G  E+A+  + + + +G V
Sbjct: 476 LFEGLQKLGKEEDAMKIVSMAVMNGKV 502



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/459 (20%), Positives = 190/459 (41%), Gaps = 56/459 (12%)

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS----YTTMIKGYVAVER 246
           G + +  TY++++   +R +  D  E L A+++  N  P +      +  +++ Y    R
Sbjct: 78  GFTHNYDTYHSILFKLSRARAFDPVESLMADLR--NSYPPIKCGENLFIDLLRNYGLAGR 135

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY-IPPKDNSVF 305
            + ++RIF  +  F VK +  +   LL  L    +   V  + +   E + I P   ++F
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITP---NIF 192

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
                  C                            +L++  CK    + A K+LD++  
Sbjct: 193 ------TC---------------------------NLLVKALCKKNDIESAYKVLDEI-- 217

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
                 P   L     +Y  ++      G    A+    +++ +G   D   +  L+ G+
Sbjct: 218 ------PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K G    A  ++  M +  +  +   Y  +I +  ++ +  +A+   D M+E    P S
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
           SL   V+++L ED +V  A  + + M++     +  L++ ++  L   G V EA    D 
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD- 390

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
             + GS+P+   +++L++ + EKG+   A +L D    R C  +  +Y  +++ L   G 
Sbjct: 391 EFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGN 450

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
                 +L +++E G   +  +   L  GL + G  + A
Sbjct: 451 VKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 118/524 (22%), Positives = 223/524 (42%), Gaps = 64/524 (12%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  +++ LG+ GK+  A+ +L       +  +   + VL++++ + G +  + ++ 
Sbjct: 363 DLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQML 422

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M++  V  +V ++ ++   +++RG    A  Y  KM   GI P   TY  ++ GFF  
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKC 482

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              E A+  + DM   G+  +    ++++NG  +   ++EAE LF +M E+ +    ++Y
Sbjct: 483 QGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNY 542

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++ G         AL++  E+   ++ P+AV Y   +  LC  GK  E +  L+EM  
Sbjct: 543 ATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRN 602

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             + P D + +  ++  QC+ G+ + A  +L  M   SI      Y  L+    +A + +
Sbjct: 603 TGLEP-DQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVE 661

Query: 355 RAIKLLDKLVEKEIILRP---------------------------QSTLDMEASSYNPMI 387
           +A  LL+++        P                            + L  + + YN ++
Sbjct: 662 KAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLV 721

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             LC +G T KA I   +++ +G+  D + FN LI GH K  + D+AF     M  +G+ 
Sbjct: 722 HVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLS 781

Query: 447 RD-------------------ADAYIC----------------LIESYLRKGEPADAKTA 471
            +                   AD  IC                L+  Y +K    +A   
Sbjct: 782 PNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRL 841

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
              M+  G  P +S + S++    + G +  A  +   M  +GV
Sbjct: 842 YCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGV 885



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 139/626 (22%), Positives = 262/626 (41%), Gaps = 87/626 (13%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI+ Y K   +  ++ + + M   G+   V  Y+ L       G    A     +M 
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           ++G+EP+  T+  ++  +    ++E A   +E M   G+  DVVT + +++G  R  +  
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS 311

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF------------- 260
           EA  LF EM +  + P  ++Y T I     V+R +++L +  EM S              
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371

Query: 261 ----------------------DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
                                 ++ PN VTYT L+   C AG +   +++L +M E+ + 
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +   F  +L    K G +  AA  ++ M    I      YG LI+ F K +  + A+ 
Sbjct: 432 P-NVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALD 490

Query: 359 LLDKLVEKEIILRPQSTLDMEASSY--NPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPV 415
           +   ++ + +          EA+++  + ++  L  NG   +AE  F+ + ++G +LD V
Sbjct: 491 VYRDMLHEGV----------EANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHV 540

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +  L+ G  K GN  +A ++ + +  R +  DA  Y   I    R G+ ++AK+ L  M
Sbjct: 541 NYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEM 600

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
              G  P  + + +++ +   +G    A +++  M    +K NL     ++  LL  G V
Sbjct: 601 RNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVV 660

Query: 536 EEALGRIDLMMQSGSVPN--------------------------------------FDSL 557
           E+A   ++ M  +G  P                                       +++L
Sbjct: 661 EKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTL 720

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           + VL   G T  A  +LD  LGR    D  ++  ++     +    NA++   +++ +G 
Sbjct: 721 VHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGL 780

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADIL 643
             +  + + L+ GL   G   +AD +
Sbjct: 781 SPNIATFNTLLGGLESAGRIGEADTV 806



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 152/683 (22%), Positives = 282/683 (41%), Gaps = 52/683 (7%)

Query: 2   AERAWTTRLQNKIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           A+ AW    + K   + P    H  +       K  E A   +  + R+G+   D  T  
Sbjct: 240 ADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVL-PDVVTLS 298

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            +++ L R G+ + A  +  +M K GV  +   +   I+S  K   V ES+ +   M   
Sbjct: 299 ALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSR 358

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           GV   +  Y  +   + + G+   AK      LS+ I P   TY V++     +  ++ A
Sbjct: 359 GVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGA 418

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            +    M+ + +S +VVT+++++NG  +   + +A     +MK+  I P V++Y T+I G
Sbjct: 419 EQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDG 478

Query: 241 YVAVERADDALRIFDEMKSFDVKPNA---------------------------------- 266
           +   +  + AL ++ +M    V+ N                                   
Sbjct: 479 FFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLD 538

Query: 267 -VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            V Y  L+ GL   G M    KV +E++ER + P D  V+   +   C+ G  + A   L
Sbjct: 539 HVNYATLMDGLFKTGNMPAALKVGQELMERNLSP-DAVVYNVFINCLCRLGKFSEAKSFL 597

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
           K M    +  +   Y  +I   C+     +A+KLL+++          S++     +Y  
Sbjct: 598 KEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEM--------KWSSIKPNLITYTT 649

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++  L   G   KA+    ++   G    P+ +  +++  S   +P    E+ ++M   G
Sbjct: 650 LVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAG 709

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +  D   Y  L+      G    A   LD M+  G +P +  F +++    +   +  A 
Sbjct: 710 LHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAF 769

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
                M+ +G+  N+     +L  L   G + EA   I  M + G  PN   +D L++  
Sbjct: 770 ATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGY 829

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
           ++K   + A++L    + +  I   ++Y  ++     AG  +N    LF  M++ GV   
Sbjct: 830 AKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAG-MMNQAKELFSEMKRRGVLHT 888

Query: 622 KSS-DKLIAGLNQEGNTKQADIL 643
            S+ D L+ G ++  N  +  IL
Sbjct: 889 SSTYDILLNGWSKLRNGTEVRIL 911



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/547 (23%), Positives = 249/547 (45%), Gaps = 19/547 (3%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGVER-SVKSYDALFKL 135
           +L +M K+GV WD       +    + G+V E+  + +++ +  G++   V  ++AL   
Sbjct: 139 VLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDG 198

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
             +      A     +M ++G+      YN ++ GFF S   + A    E MK+ G+   
Sbjct: 199 YCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPS 258

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VVT+ T+I  Y + K+++EA  L+  M    + P V++ + ++ G     R  +A  +F 
Sbjct: 259 VVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFR 318

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM    V PN VTY   +  L    ++ E   +L EMV R +   D  ++  ++    K 
Sbjct: 319 EMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGV-AMDLVMYTTVMDRLGKE 377

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G +  A DVL+  +  +I      Y +L++  C+A   D A ++L ++ EK +       
Sbjct: 378 GKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSV------- 430

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
                 +++ ++  L   G   KA  + R++   G+  + V +  LI G  K    ++A 
Sbjct: 431 -SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAAL 489

Query: 435 EIVKIMGRRGVPRDADAYIC--LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           ++ + M   GV  +A+ +I   L+    + G   +A+     M E G       + ++M+
Sbjct: 490 DVYRDMLHEGV--EANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMD 547

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
            LF+ G +  A +V + ++E+ +  +  +    +  L   G   EA   +  M  +G  P
Sbjct: 548 GLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEP 607

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +   +++++S    +G T  A+KLL+         +L +Y  ++  LL AG    A  +L
Sbjct: 608 DQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLL 667

Query: 610 FKIMEKG 616
            ++   G
Sbjct: 668 NEMASAG 674



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/528 (22%), Positives = 233/528 (44%), Gaps = 15/528 (2%)

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           Q  V     SY+     +  +G   +A    ++M   G+     T +  L G   +  + 
Sbjct: 110 QPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVG 169

Query: 179 TAIRFFEDM-KSRGI-SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
            A    E + + RGI  L VV +N +I+GY + + M  A  +   M  + +   V+ Y T
Sbjct: 170 EAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNT 229

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++ G+     AD A  + + MK+  V+P+ VT+T L+   C   ++ E   +   MV   
Sbjct: 230 LVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSG 289

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P D      L+   C+ G  + A  + + M ++ +      Y   I++  K +  + +
Sbjct: 290 VLP-DVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNES 348

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           + LL ++V + +         M+   Y  ++  L   G+  +A+   R  +   +  + V
Sbjct: 349 LGLLGEMVSRGVA--------MDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCV 400

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +  L+  H + GN D A +++  M  + V  +   +  ++   +++G  A A   +  M
Sbjct: 401 TYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKM 460

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
            + G +P    + ++++  F+    + A  V + M+ +GV+ N  +V  ++  L   G++
Sbjct: 461 KDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNI 520

Query: 536 EEALGRIDLMMQSGSV---PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           EEA      M + G +    N+ +L+  L + G   AA+K+    + R+   D   Y   
Sbjct: 521 EEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVF 580

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++ L   GK   A S L ++   G   D  + + +I+   +EGNT +A
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKA 628



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 123/559 (22%), Positives = 210/559 (37%), Gaps = 115/559 (20%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +++   R G ++ A  +LL M +K V  +   F  ++    K+G + ++      M
Sbjct: 401 TYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKM 460

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K  G+  +V +Y  L     +      A   +  ML EG+E      + ++ G   +  +
Sbjct: 461 KDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNI 520

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMING----------------------------YN-- 207
           E A   F+DM  RG+ LD V Y T+++G                            YN  
Sbjct: 521 EEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVF 580

Query: 208 -----RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
                R  K  EA+    EM+   +EP   +Y TMI           AL++ +EMK   +
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK---------------------- 300
           KPN +TYT L+ GL +AG + + + +L EM      P                       
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILE 700

Query: 301 ------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                       D +V+  L+ V C  G    A  VL  M+   I  +   +  LI   C
Sbjct: 701 VHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHC 760

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K+   D A     +++ +         L    +++N ++  L   G+ G+A+    ++ K
Sbjct: 761 KSSHLDNAFATYAQMLHQ--------GLSPNIATFNTLLGGLESAGRIGEADTVICEMKK 812

Query: 409 KGVLDP-------------------------------------VAFNNLIRGHSKEGNPD 431
            G L+P                                       +N+LI   +K G  +
Sbjct: 813 MG-LEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMN 871

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A E+   M RRGV   +  Y  L+  + +     + +  L  M E G  P+     S+ 
Sbjct: 872 QAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMS 931

Query: 492 ESLFEDGRVQTASRVMKSM 510
            +  + G    A R++K++
Sbjct: 932 RAFSKPGMTWEARRLLKTL 950



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 77/384 (20%), Positives = 140/384 (36%), Gaps = 53/384 (13%)

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P    +  +L+     SG L AAA   +      +P +      +I ++C       A+ 
Sbjct: 48  PPPARLLRRLIPALASSG-LVAAASRFR-----PVPGDPLTLNSIILSYCSLHALRPALS 101

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV------- 411
           LL           PQ  +  +  SYN  +  L   G    A     ++ K+GV       
Sbjct: 102 LLRSSSG------PQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTM 155

Query: 412 -------------------------------LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
                                          L  V +N LI G+ K  +  +A  +V+ M
Sbjct: 156 STALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERM 215

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G+  D   Y  L+  +   G+   A    + M  DG  P+     +++    +  R+
Sbjct: 216 TTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRI 275

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
           + A  + + MV  GV  ++  ++ +++ L   G   EA      M + G  PN   + + 
Sbjct: 276 EEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTF 335

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  L++  +   ++ LL   + R   +DL  Y  V+D L   GK   A  +L   +    
Sbjct: 336 IDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNI 395

Query: 618 VTDWKSSDKLIAGLNQEGNTKQAD 641
             +  +   L+    + GN   A+
Sbjct: 396 TPNCVTYTVLVDAHCRAGNIDGAE 419


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 226/485 (46%), Gaps = 14/485 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +F+ L+ +  + G    ++ +F  +   G+  S+ +   L      +     A      +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTI 116

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           L  G +P   T+N ++ GF ++  +  A+ F  D+ ++G  LD  +Y ++ING  +  + 
Sbjct: 117 LKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQT 176

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            +A +L  +M+E  + P +I+Y+T+I G        DALR+F  + S  +  + V Y +L
Sbjct: 177 RDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSL 236

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G+  E  ++L  MV   I P D+  F  L+   CK G +  A  V   M++  
Sbjct: 237 IHGCCSVGQWREATRLLTMMVRGNINP-DDYTFNILVDALCKEGRIVEAQGVFAVMMKRG 295

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              +   Y  L+E FC +     A +L +++V++         L+ +  +YN +I   C 
Sbjct: 296 EKPDIVTYNALMEGFCLSNNVSEARELFNRMVKR--------GLEPDVLNYNVLINGYCK 347

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
                +A + F+++  K ++  +A +N+LI G  K G      E+V  M  RG   D   
Sbjct: 348 IDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVT 407

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y   ++++  K +P +   +L   I  G  P   ++  ++E+  +  +++ A   ++ ++
Sbjct: 408 YNIFLDAFC-KSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLL 466

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
             G   N+     ++ AL      +EA+  +  M  +   P+   F++++  L E+ +T 
Sbjct: 467 IHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETD 526

Query: 569 AAVKL 573
            A KL
Sbjct: 527 KAEKL 531



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 192/407 (47%), Gaps = 11/407 (2%)

Query: 43  FRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYG 102
           FR    A  +  D  ++  +I  L + G+   A  +L  M +  V+ +   +  +I+   
Sbjct: 147 FRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLC 206

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           K  ++ +++++F ++   G+   V +Y++L       G++  A R    M+   I P  +
Sbjct: 207 KDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDY 266

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           T+N+++       ++  A   F  M  RG   D+VTYN ++ G+     + EA +LF  M
Sbjct: 267 TFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRM 326

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
            ++ +EP V++Y  +I GY  ++  D+A+ +F E++  ++ PN  TY +L+ GLC  G+M
Sbjct: 327 VKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRM 386

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
             VQ+++ EM +R   P D   +   L   CKS     A  + + +++  I  +   Y +
Sbjct: 387 SCVQELVDEMCDRGQSP-DIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDV 444

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           ++ENFCK E     +K+ ++ ++  +I            +Y  MI  LC +    +A   
Sbjct: 445 IVENFCKGE----KLKIAEEALQHLLI----HGCCPNVRTYTIMINALCKDCSFDEAMTL 496

Query: 403 FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
             ++       D V F  +I    +    D A ++   M  RG+  D
Sbjct: 497 LSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 199/455 (43%), Gaps = 11/455 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI-FDIMKQL 120
           +I        L+ A  +L  + K G Q +   F  LI  +   G+V +++    D+M + 
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK- 154

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G      SY +L   + + G+   A +   KM  + + P   TY+ ++ G      +  A
Sbjct: 155 GYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADA 214

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +R F  + SRGI +DVV YN++I+G     +  EA +L   M   NI P   ++  ++  
Sbjct: 215 LRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDA 274

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                R  +A  +F  M     KP+ VTY AL+ G C +  + E +++   MV+R + P 
Sbjct: 275 LCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEP- 333

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+   CK   ++ A  + K +   ++      Y  LI+  CK        +L+
Sbjct: 334 DVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELV 393

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
           D++ +     R QS    +  +YN  +   C +    KA   FRQ+++    D   ++ +
Sbjct: 394 DEMCD-----RGQSP---DIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVI 445

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           +    K      A E ++ +   G   +   Y  +I +  +     +A T L  M ++  
Sbjct: 446 VENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDC 505

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            P +  F +++ +L E      A ++   M+E+G+
Sbjct: 506 PPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 107/499 (21%), Positives = 210/499 (42%), Gaps = 14/499 (2%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML +   P    ++ +L          TAI  F  + S+GI+  + T   +IN Y  
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
              +  A  L   + +   +P ++++ T+I G+        A+    ++ +     +  +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y +L+ GLC  G+  +  ++L++M E  + P   +    + G+ CK   +  A  +   +
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGL-CKDRLIADALRLFSLV 221

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               I  +   Y  LI   C    +  A +LL  +V   I        + +  ++N ++ 
Sbjct: 222 TSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNI--------NPDDYTFNILVD 273

Query: 389 HLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G+  +A+  F  +MK+G   D V +N L+ G     N   A E+   M +RG+  
Sbjct: 274 ALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEP 333

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  LI  Y +     +A      +      P  + + S+++ L + GR+     ++
Sbjct: 334 DVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELV 393

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEK 564
             M ++G   ++      L+A       E+A+     ++Q G  P+F   D ++    + 
Sbjct: 394 DEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKG 452

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
            K   A + L   L   C  ++ +Y  +++AL        A ++L K+ +     D  + 
Sbjct: 453 EKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTF 512

Query: 625 DKLIAGLNQEGNTKQADIL 643
           + +I  L +   T +A+ L
Sbjct: 513 ETIIGALQERNETDKAEKL 531



 Score = 39.3 bits (90), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 36/176 (20%), Positives = 74/176 (42%), Gaps = 14/176 (7%)

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           D   + + M+     P   +F  ++ ++   G   TA  +   +  KG+  ++  +  ++
Sbjct: 38  DTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILI 97

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL-LDFCLGRDC 582
                + H+  A   +  +++ G  PN   F++L++     G    A+   LD  + +  
Sbjct: 98  NCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL-MAKGY 156

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEK---------GGVTDWKSSDKLIA 629
            +D  SY  +++ L   G+T +A  +L K+ E            V D    D+LIA
Sbjct: 157 PLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIA 212


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 212/454 (46%), Gaps = 11/454 (2%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++ +F  M +     S+  ++ L   I++  +Y +      KM   GI    +T+N+
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    ++  A+     M   G   D VT  +++NG+ R  ++ +A  L  +M E  
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P +++Y  +I      +R +DA   F E++   ++PN VTYTAL+ GLC++ +  +  
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           ++L +M+++ I P +   +  LL    K+G +  A ++ + M+R+SI  +   Y  LI  
Sbjct: 246 RLLSDMIKKKITP-NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C  +  D A ++ D +V K  +         +  SYN +I   C   +       FR++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCL--------ADVVSYNTLINGFCKAKRVEDGMKLFREM 356

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            ++G++ + V +N LI+G  + G+ D A E    M   G+  D   Y  L+      GE 
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A    + M +         + +V+  + + G+V+ A  +  S+  KG+K ++     +
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
           +  L  +G + E       M Q G + N D  LS
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQEGLMKN-DCTLS 509



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 221/472 (46%), Gaps = 19/472 (4%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           K R      D N + + +   K  +  +   + +E  G+ N D  T   +I       ++
Sbjct: 78  KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN-DLYTFNIVINCFCCCFQV 136

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  IL  M K G + D      L+  + ++  V ++V + D M ++G +  + +Y+A+
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + +  R   A  +F ++  +GI P   TY  ++ G   S +   A R   DM  + I
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
           + +V+TY+ +++ + +  K+ EA++LF EM   +I+P +++Y+++I G    +R D+A +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +FD M S     + V+Y  L+ G C A ++ +  K+ REM +R +   +   +  L+   
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQGF 375

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
            ++G ++ A +    M    I  +   Y IL+   C     ++A+ + + + ++E     
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE----- 430

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
              +D++  +Y  +I+ +C  G+  +A   F  L  KG+  D V +  ++ G   +G   
Sbjct: 431 ---MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
               +   M + G+ ++        +  L  G+   +   +  M+  G++P+
Sbjct: 488 EVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPS 531



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 189/421 (44%), Gaps = 13/421 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F+ M+     P+   +N +L       K +  I   + M+  GI  D+ T+N +IN +  
Sbjct: 73  FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++  A  +  +M +   EP  ++  +++ G+    R  DA+ + D+M     KP+ V 
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y A++  LC   ++ +     +E+  + I P +   +  L+   C S   + AA +L  M
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRP-NVVTYTALVNGLCNSSRWSDAARLLSDM 251

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           I+  I      Y  L++ F K      A +L +++V   I        D +  +Y+ +I 
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI--------DPDIVTYSSLIN 303

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC + +  +A   F  ++ KG L D V++N LI G  K    +   ++ + M +RG+  
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +   Y  LI+ + + G+   A+     M   G SP    +  ++  L ++G ++ A  + 
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           + M ++ +  ++     ++  +   G VEEA      +   G  P+   + +++S L  K
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 565 G 565
           G
Sbjct: 484 G 484



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/464 (21%), Positives = 194/464 (41%), Gaps = 46/464 (9%)

Query: 175 LKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           +KL  AI  F DM KSR     +V +N +++   + KK D    L  +M+   I   + +
Sbjct: 64  IKLNDAIDLFSDMVKSRPFP-SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           +  +I  +    +   AL I  +M     +P+ VT  +L+ G C   ++ +   ++ +MV
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           E    P D   +  ++   CK+  +N A D  K + R  I      Y  L+   C +  +
Sbjct: 183 EIGYKP-DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
             A +LL  +++K+I   P         +Y+ ++     NG+  +A+  F ++++  + D
Sbjct: 242 SDAARLLSDMIKKKIT--PN------VITYSALLDAFVKNGKVLEAKELFEEMVRMSI-D 292

Query: 414 P--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           P  V +++LI G       D A ++  +M  +G   D  +Y  LI  + +     D    
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
              M + G    +  + ++++  F+ G V  A                            
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA---------------------------- 384

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
               +E   ++D    S  +  ++ LL  L + G+   A+ + +    R+  +D+ +Y  
Sbjct: 385 ----QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
           V+  +   GK   A+S+   +  KG   D  +   +++GL  +G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 230/485 (47%), Gaps = 15/485 (3%)

Query: 39  ALQFFRWV--ERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           A +FF+WV  +R G+ +    T L  +E+LG   + N A  +L ++ K        +F  
Sbjct: 2   AYKFFKWVRTQRGGVPSVRACTTL--VEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIE 59

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L   Y   G++++SV+    M+      +  +Y++L    ++ G    A   +  M   G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P  +T+NV++  F  + ++++  + FE+M+++  S +V+TY+ +I+   +   +++A 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           K+F +MK +   P + +YT+MI G       D A  +F+EM S  +    V Y +L+ GL
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
             +G+     K+ REM+ + + P D+  F  L+     +G  + A  + +    +    +
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQP-DHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALD 298

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y +LI+  CK++  D A ++  +L E  ++  P      +  ++N ++  LC +G+ 
Sbjct: 299 VNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLV--P------DVYTFNALMDGLCKSGRI 350

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A I    + + G   D   +N LI G  K G  + A +++  M   G   D   Y  L
Sbjct: 351 HDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTL 410

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+   + G   DA    + +   G +   + + +++  L   GRV  A ++   M ++ V
Sbjct: 411 IDESCKGGRIEDALRLFEEISAKGFANTVT-YNTILNGLCMAGRVDEAYKLFNGMKQETV 469

Query: 516 KENLD 520
              +D
Sbjct: 470 DGVID 474



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 176/370 (47%), Gaps = 11/370 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           +  N++ N    AK  +   + F  ++     + +  T+  +I+ + + G +  A  + L
Sbjct: 125 YTFNVLMNAFKKAKRVDSVWKLFEEMQNQNC-SPNVITYSILIDAVCKCGGVEKALKVFL 183

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           DM  +G + +   +  +I+  GK G V ++  +F+ M   G+  +   Y++L   + R G
Sbjct: 184 DMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A + F +MLS+G++P   T+  +++G  ++ +   A R F++ +  G +LDV  YN
Sbjct: 244 RADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYN 303

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+   + K++DEA ++F E++E  + P V ++  ++ G     R  DA  +  +MK  
Sbjct: 304 VLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA 363

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+   Y  L+ GL  +G++ E  ++L EM      P D   +  L+   CK G +  
Sbjct: 364 GCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEP-DVVTYNTLIDESCKGGRIE- 421

Query: 321 AADVLKAMIRLSIPTEAG--HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             D L+    +S    A    Y  ++   C A   D A KL + + ++ +       +D 
Sbjct: 422 --DALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETV----DGVIDP 475

Query: 379 EASSYNPMIQ 388
           +  +Y  ++ 
Sbjct: 476 DFVTYTTLLN 485



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 219/515 (42%), Gaps = 72/515 (13%)

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           + RY++  R F       IE  R        G+  +  LE ++   + M+    +L    
Sbjct: 47  KSRYILQPRIF-------IELAR--------GYASAGLLEKSVEALKRMEGHRCALTASA 91

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN++I+ + +     +A  ++  M +  + P   ++  ++  +   +R D   ++F+EM+
Sbjct: 92  YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQ 151

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           + +  PN +TY+ L+  +C  G + +  KV  +M  R   P   ++F             
Sbjct: 152 NQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRP---NIFT------------ 196

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
                                Y  +I+   K+   D+A  L +++  + ++         
Sbjct: 197 ---------------------YTSMIDGLGKSGHVDKAFFLFEEMTSEGLV--------A 227

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV 437
               YN +I  L  +G+   A   FR+++ KG+  D V F +L+ G    G    A  I 
Sbjct: 228 TRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIF 287

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           +     G   D + Y  LI++  +     +A      + EDG  P    F ++M+ L + 
Sbjct: 288 QEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKS 347

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS-GSVPN--- 553
           GR+  A  ++  M   G   ++ +   +++ L   G VEEA G++ L MQS G  P+   
Sbjct: 348 GRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEA-GQLLLEMQSLGYEPDVVT 406

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +++L+    + G+   A++L +    +    +  +Y  +L+ L  AG+   AY  LF  M
Sbjct: 407 YNTLIDESCKGGRIEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYK-LFNGM 464

Query: 614 EKGGV-----TDWKSSDKLIAGLNQEGNTKQADIL 643
           ++  V      D+ +   L+ G  Q G ++ A+ L
Sbjct: 465 KQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 6/187 (3%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ + L  +K  + A + F  +E  GL   D  T   +++ L + G+++ A  +L DM
Sbjct: 302 YNVLIDTLCKSKRLDEAWEIFGELEEDGLV-PDVYTFNALMDGLCKSGRIHDAFILLGDM 360

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G   D  ++  LI+   K G V+E+ ++   M+ LG E  V +Y+ L     + GR 
Sbjct: 361 KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRI 420

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG----ISLDVVT 198
             A R F ++ ++G   T  TYN +L G  ++ +++ A + F  MK       I  D VT
Sbjct: 421 EDALRLFEEISAKGFANT-VTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVT 479

Query: 199 YNTMING 205
           Y T++NG
Sbjct: 480 YTTLLNG 486


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 211/488 (43%), Gaps = 16/488 (3%)

Query: 64  EILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +IL  +  + H   +L     M   G+  D     ++I S+     V     +   + +L
Sbjct: 79  KILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKL 138

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G +    ++  L + +   G+   A   F+KM+ EG +P   TY  ++ G         A
Sbjct: 139 GHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAA 198

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           IR    M  +    +V+TYNT+I+   + ++++EA  +F+EM  K I P V +Y ++I G
Sbjct: 199 IRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHG 258

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                       + +EM    + PN V +T L+  LC  G +     V+  M++R + P 
Sbjct: 259 LCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEP- 317

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+   C    ++ A  V   M+R         Y  LI  +CK +  D+A+ L 
Sbjct: 318 DVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLF 377

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNN 419
           +++ ++E++  P         +YN +I  LCH G+   A   F +++  G + D V +  
Sbjct: 378 EEMCQRELV--PNIV------TYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRI 429

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+    K  + D A  ++K +    +  D  +Y  +I+   R GE   A     S+   G
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  ++  L   G +  A+++ + M   G   + D    ++    +R +  E L
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPD-DCTYNLITRGFLRNN--ETL 546

Query: 540 GRIDLMMQ 547
             I L+ +
Sbjct: 547 SAIQLLQE 554



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 206/487 (42%), Gaps = 45/487 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I     + +++    +L  + K G Q D   F  LI     +G + E++ +FD M   G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + +  +Y  L   + + G    A R    M+ +  EP   TYN ++   F   ++  A+
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK------------------ 223
             F +M ++GIS +V TYN++I+G  +F +      L  EM                   
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 224 -----------------EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
                            ++ +EP V++YT ++ G+      D+A ++FD M      PN 
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           ++Y+ L+ G C   ++ +   +  EM +R + P +   +  L+   C  G L  A  +  
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVP-NIVTYNTLIHGLCHVGRLRDAIALFH 413

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+      +   Y IL++  CK    D+A+ +L K +E        S L  +  SYN +
Sbjct: 414 EMVASGQIPDLVTYRILLDYLCKTRHLDQAMAML-KAIEG-------SNLAPDIQSYNIV 465

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  +C  G+   A   F  L  KG+   V  +  +I G   +G    A ++ + M   G 
Sbjct: 466 IDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGC 525

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  +   +LR  E   A   L  M+  G S  +S    ++E L +DG  Q+  +
Sbjct: 526 SPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQ 585

Query: 506 VMKSMVE 512
           ++   V+
Sbjct: 586 ILHEFVQ 592



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 196/454 (43%), Gaps = 49/454 (10%)

Query: 28  NVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
            ++HG     NS  A++  R + +      +  T+  +I+ L +  ++N A  I  +M  
Sbjct: 184 TLIHGLCKVGNSRAAIRLLRSMVQKNC-EPNVITYNTIIDCLFKDRQVNEALNIFSEMIA 242

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           KG+  +   +  +I    K    +    + + M    +  +V  +  L   + + G   +
Sbjct: 243 KGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTI 302

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A    + M+  G+EP   TY  ++ G  L  +++ A + F+ M  +G + +V++Y+T+IN
Sbjct: 303 AHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLIN 362

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           GY + +++D+A  LF EM ++ + P +++Y T+I G   V R  DA+ +F EM +    P
Sbjct: 363 GYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIP 422

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + VTY  LL  L                                    CK+ HL+ A  +
Sbjct: 423 DLVTYRILLDYL------------------------------------CKTRHLDQAMAM 446

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           LKA+   ++  +   Y I+I+  C+    + A  L   L  K   L P      +  +Y 
Sbjct: 447 LKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG--LHP------DVWTYT 498

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            MI  LC  G   +A   FR++   G   D   +N + RG  +     SA ++++ M  R
Sbjct: 499 IMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGR 558

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           G   DA     ++E     G     K  L   ++
Sbjct: 559 GFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/505 (22%), Positives = 209/505 (41%), Gaps = 48/505 (9%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   FN+ML     P+   +  +L          T +   + M S GI  DV T   +IN
Sbjct: 58  ALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVIN 117

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            +    ++D    + A++ +   +P   ++TT+I+G     +  +AL +FD+M     +P
Sbjct: 118 SFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQP 177

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N VTY  L+ GLC                                    K G+  AA  +
Sbjct: 178 NGVTYGTLIHGLC------------------------------------KVGNSRAAIRL 201

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L++M++ +       Y  +I+   K    + A+ +  +++ K I   P        S+YN
Sbjct: 202 LRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGI--SPN------VSTYN 253

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I  LC   +         +++   ++ + V F  L+    KEG    A ++V +M +R
Sbjct: 254 SIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQR 313

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           GV  D   Y  L++ +  + E  +A    D+M+  G +P    + +++    +  R+  A
Sbjct: 314 GVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKA 373

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSV 560
             + + M ++ +  N+     ++  L   G + +A+     M+ SG +P+  +   LL  
Sbjct: 374 MYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDY 433

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L +      A+ +L    G +   D+ SY  V+D +   G+   A  +   +  KG   D
Sbjct: 434 LCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPD 493

Query: 621 WKSSDKLIAGLNQEGNTKQADILSR 645
             +   +I GL  +G   +A  L R
Sbjct: 494 VWTYTIMINGLCLQGLLAEATKLFR 518



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 120/549 (21%), Positives = 222/549 (40%), Gaps = 52/549 (9%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + E++  F+ M  +    SV  +  +   I     Y        +M S GI    +T  +
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    +++        +   G   D  T+ T+I G     K+ EA  LF +M  + 
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT------------------ 268
            +P  ++Y T+I G   V  +  A+R+   M   + +PN +T                  
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 269 -----------------YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
                            Y +++ GLC   +   V  ++ EMV+  I P +  +F  L+  
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMP-NVVIFTTLVDA 293

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK G +  A DV+  MI+  +  +   Y  L++  C     D A K+ D +V K     
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG--CA 351

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNP 430
           P         SY+ +I   C   +  KA   F ++ ++ ++ + V +N LI G    G  
Sbjct: 352 PN------VISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRL 405

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH-SPASSLFRS 489
             A  +   M   G   D   Y  L++ YL K    D   A+   IE  + +P    +  
Sbjct: 406 RDAIALFHEMVASGQIPDLVTYRILLD-YLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNI 464

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           V++ +   G ++ A  +  S+  KG+  ++     ++  L ++G + EA      M   G
Sbjct: 465 VIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDG 524

Query: 550 SVPNFDSLLSVLS----EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
             P+ D   ++++       +T++A++LL   LGR    D ++   +++ L   G   + 
Sbjct: 525 CSPD-DCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSV 583

Query: 606 YSILFKIME 614
             IL + ++
Sbjct: 584 KQILHEFVQ 592


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 222/508 (43%), Gaps = 15/508 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ S  K         + + M   G+   V + + L        R   A     K+L
Sbjct: 70  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL 129

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G++P   T+  ++ G  +  K+  A+  F+ M   G   +VVTY T+ING  +    +
Sbjct: 130 KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 189

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A +L   M++ N +P V+ YT++I       +  +A  +F +M    + P+  TYT+L+
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 249

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC+  +   V  +L +M+   I P D  +F  ++   CK G +  A DV+  MI   +
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMP-DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV 308

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  L++  C     D A+K+ D +V       P         SYN +I   C  
Sbjct: 309 EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG--YAPN------VISYNTLINGYCKI 360

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  KA   F ++ +K ++ + V +N L+ G    G    A  +   M   G   D   Y
Sbjct: 361 QRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATY 420

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGH-SPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
             L++ YL K    D   AL   IE  +  P   ++  V++ +   G ++ A  +  ++ 
Sbjct: 421 RILLD-YLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLS 479

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
            KG++ N+     ++  L  RG ++EA      M  +G  P+   ++++   L +  + +
Sbjct: 480 SKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEAL 539

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDAL 596
            A++LL   L R    D+++   +++ L
Sbjct: 540 RAIQLLQEMLARGFSADVSTTTLLVEML 567



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 191/420 (45%), Gaps = 11/420 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL  F  +   G F  +  T+  +I  L +VG  N A  +L  M +   Q D  ++  +I
Sbjct: 156 ALHLFDKMIGEG-FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSII 214

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +S  K   V E+  +F  M   G+   + +Y +L   +     +       N+M++  I 
Sbjct: 215 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 274

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P    ++ ++       K+  A    + M  RG+  +VVTYN +++G+    +MDEA K+
Sbjct: 275 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 334

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M      P VISY T+I GY  ++R D A  +F+EM   ++ PN VTY  L+ GLC 
Sbjct: 335 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCH 394

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G++ +   +  EMV     P D + +  LL   CK  HL+ A  +LK +   ++  +  
Sbjct: 395 VGRLQDAIALFHEMVAHGQIP-DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 453

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y I+I+  C+A   + A  +   L  K   LRP         +Y  MI  LC  G   +
Sbjct: 454 IYTIVIDGMCRAGELEAARDIFSNLSSKG--LRPN------VRTYTIMINGLCRRGLLDE 505

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A   F ++   G   D   +N + +G  +      A ++++ M  RG   D      L+E
Sbjct: 506 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 565



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/498 (23%), Positives = 211/498 (42%), Gaps = 46/498 (9%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML     P+   +N +L     + +  T       M S GI  DV T N +IN +  
Sbjct: 55  FNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCH 114

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             +   A  + A++ +  ++P   ++TT+I+G     +  DAL +FD+M     +PN VT
Sbjct: 115 LNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT 174

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ GLC  G      ++LR M +    P D  V+  ++   CK   +  A ++   M
Sbjct: 175 YGTLINGLCKVGNTNAAIRLLRSMEQGNCQP-DVVVYTSIIDSLCKDRQVTEAFNLFSKM 233

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +   I  +   Y  LI + C    +     LL++++  +I+  P                
Sbjct: 234 VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM--P---------------- 275

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
                                   D V F+ ++    KEG    A ++V +M  RGV  +
Sbjct: 276 ------------------------DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPN 311

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  L++ +  + E  +A    D+M+ +G++P    + +++    +  R+  A+ + +
Sbjct: 312 VVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFE 371

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKG 565
            M +K +  N      ++  L   G +++A+     M+  G +P+  +   LL  L +K 
Sbjct: 372 EMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKS 431

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
               A+ LL    G +   D+  Y  V+D +  AG+   A  I   +  KG   + ++  
Sbjct: 432 HLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYT 491

Query: 626 KLIAGLNQEGNTKQADIL 643
            +I GL + G   +A+ L
Sbjct: 492 IMINGLCRRGLLDEANKL 509



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 195/487 (40%), Gaps = 48/487 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I     + +   A  +L  + K G+Q D   F  LI     +G + +++ +FD M   G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + +V +Y  L   + + G    A R    M     +P    Y  ++       ++  A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F  M  +GIS D+ TY ++I+      +      L  +M    I P V+ ++T++   
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               +  +A  + D M    V+PN VTY AL+ G C   +M E  KV   MV        
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV-------- 339

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
                          H   A +V+              Y  LI  +CK +  D+A  L +
Sbjct: 340 ---------------HNGYAPNVIS-------------YNTLINGYCKIQRMDKATYLFE 371

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNL 420
           ++ +KE+I  P +       +YN ++  LCH G+   A   F +++  G + D   +  L
Sbjct: 372 EMCQKELI--PNTV------TYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRIL 423

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           +    K+ + D A  ++K +    +  D   Y  +I+   R GE   A+    ++   G 
Sbjct: 424 LDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 483

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    +  ++  L   G +  A+++   M   G   +      I + LL     +EAL 
Sbjct: 484 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN---KEALR 540

Query: 541 RIDLMMQ 547
            I L+ +
Sbjct: 541 AIQLLQE 547


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 185/395 (46%), Gaps = 11/395 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL+F   V   G F+ D+ T   ++    R+G +N A  I+  M +KG   D   +  
Sbjct: 245 EEALRFVLEVSEEG-FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNS 303

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI    K G  +++++I   M       +  +Y+ L   + +      A      ++S+G
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   T+N ++ G  LS   + A+  FE+MK++G   D  TY+ +I+     +++ EA 
Sbjct: 364 LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEAL 423

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L  EM+        + Y T+I G     R +DA  IFD+M+   V  ++VTY  L+ GL
Sbjct: 424 MLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGL 483

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   ++ E  +++ +M+   + P D   +  LL   C+ G +  A D+++ M       +
Sbjct: 484 CKNKRVEEASQLMDQMIMEGLKP-DKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              YG LI   C+A   D A KLL  +  K I+L P         +YNP+IQ L    +T
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPH--------AYNPVIQALFMRKRT 594

Query: 397 GKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP 430
            +    FR++M+K    D +    + RG    G P
Sbjct: 595 KEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGP 629



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 135/569 (23%), Positives = 248/569 (43%), Gaps = 15/569 (2%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  +   G   +   F  LI+S+     ++  +KI +   +LG +     Y+     ++
Sbjct: 77  LLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NELGFKPDTNFYNIALNALV 134

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
              +  + +   +KM++EGI     T+NV++     + +L  AI   E+M + G+  D +
Sbjct: 135 EDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEI 194

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           T+ T++ G+     ++ A K+  +M       T +S   ++ G+    R ++ALR   E+
Sbjct: 195 TFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEV 254

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
                 P+ VT+ +L+ G C  G + +   ++  M+E+   P D   +  L+   CK G 
Sbjct: 255 SEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDP-DVYTYNSLISGMCKLGE 313

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
              A ++L+ MI          Y  LI   CK    + A  L   LV K ++        
Sbjct: 314 FEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLL-------- 365

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
            +  ++N +IQ LC +     A   F ++  KG   D   ++ LI     E     A  +
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 425

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +K M   G  R+A  Y  LI+   +     DA+   D M   G S +S  + ++++ L +
Sbjct: 426 LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 485

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
           + RV+ AS++M  M+ +G+K +      +L      G +E+A   +  M  +G  P+   
Sbjct: 486 NKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFT 545

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           + +L+  L   G+   A KLL     +  ++   +Y  V+ AL    +T     +  ++M
Sbjct: 546 YGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMM 605

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADI 642
           EK    D  +   +  GL   G   Q  I
Sbjct: 606 EKSDPPDALTHKIVFRGLCNGGGPIQEAI 634



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 226/498 (45%), Gaps = 22/498 (4%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           +  LK++E+L       H++     M  +G+  D   F VLI++  K   ++ ++ + + 
Sbjct: 136 DNKLKLVEML-------HSK-----MVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEE 183

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M   G++    ++  L +  +  G    A +   +ML  G   T  +  V++ GF    +
Sbjct: 184 MANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGR 243

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +E A+RF  ++   G S D VT+N+++NG+ R   +++A  +   M EK  +P V +Y +
Sbjct: 244 VEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNS 303

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G   +   + A+ I  +M   +  PN VTY  L+  LC   ++     + R +V + 
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P D   F  L+   C S + + A ++ + M       +   Y ILI++ C       A
Sbjct: 364 LLP-DVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           + LL ++          S     A  YN +I  LC + +   AE  F Q+   GV    V
Sbjct: 423 LMLLKEM--------ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV 474

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N LI G  K    + A +++  M   G+  D   Y  L+  + R G+   A   + +M
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
             +G  P    + +++  L   GRV  AS++++S+  KG+         +++AL MR   
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRT 594

Query: 536 EEALGRIDLMMQSGSVPN 553
           +E +     MM+    P+
Sbjct: 595 KEGMRLFREMMEKSDPPD 612



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 118/547 (21%), Positives = 250/547 (45%), Gaps = 21/547 (3%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+   V +++ L K + +  +   A     +M + G++P   T+  ++ GF     L  A
Sbjct: 153 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 212

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           ++  + M   G  L  V+   ++NG+ +  +++EA +   E+ E+   P  +++ +++ G
Sbjct: 213 LKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNG 272

Query: 241 YVAVERADDALRIFDEM--KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           +  +   +DAL I D M  K FD  P+  TY +L+ G+C  G+  +  ++L++M+ R   
Sbjct: 273 FCRIGNVNDALDIVDFMIEKGFD--PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECS 330

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +   +  L+   CK   + AA D+ + ++   +  +   +  LI+  C ++  D A++
Sbjct: 331 P-NTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAME 389

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
           + +++  K    +P      +  +Y+ +I  LC+  +  +A +  +++   G   + V +
Sbjct: 390 MFEEMKNKGC--KP------DEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVY 441

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI G  K    + A EI   M   GV R +  Y  LI+   +     +A   +D MI 
Sbjct: 442 NTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIM 501

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           +G  P    + S++      G ++ A  ++++M   G + ++     ++  L   G V+ 
Sbjct: 502 EGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDV 561

Query: 538 ALGRIDLMMQSGSV--PN-FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A   +  +   G V  P+ ++ ++  L  + +T   ++L    + +    D  +++ V  
Sbjct: 562 ASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFR 621

Query: 595 ALLAAGKTLN-AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
            L   G  +  A     +++EKG + ++ S   L  GL    +    D L  +I   M +
Sbjct: 622 GLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGL---CSLSMEDTLIELINMVMEK 678

Query: 654 GSQKEKK 660
               E++
Sbjct: 679 AQMSERE 685



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 229/509 (44%), Gaps = 19/509 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I+ L +  +L  A  +L +M   G++ DE  F  L++ + ++G +  ++K+ 
Sbjct: 157 DVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMK 216

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G   +  S   L     + GR   A R+  ++  EG  P + T+N ++ GF   
Sbjct: 217 KQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRI 276

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +  A+   + M  +G   DV TYN++I+G  +  + ++A ++  +M  +   P  ++Y
Sbjct: 277 GNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTY 336

Query: 235 TTMIKGYV---AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            T+I        +E A D  RI   + S  + P+  T+  L+ GLC +       ++  E
Sbjct: 337 NTLISALCKENEIEAATDLARI---LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE 393

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M  +   P D   +  L+   C    L  A  +LK M        A  Y  LI+  CK+ 
Sbjct: 394 MKNKGCKP-DEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSR 452

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             + A ++ D++   E++   +S++     +YN +I  LC N +  +A     Q++ +G+
Sbjct: 453 RIEDAEEIFDQM---ELLGVSRSSV-----TYNTLIDGLCKNKRVEEASQLMDQMIMEGL 504

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             D   +N+L+    + G+ + A +IV+ M   G   D   Y  LI    R G    A  
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L S+   G       +  V+++LF   R +   R+ + M+EK    +  L  KI+   L
Sbjct: 565 LLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPD-ALTHKIVFRGL 623

Query: 531 MR--GHVEEALGRIDLMMQSGSVPNFDSL 557
               G ++EA+     M++ G +P F S 
Sbjct: 624 CNGGGPIQEAIDFTVEMLEKGILPEFPSF 652



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 157/353 (44%), Gaps = 37/353 (10%)

Query: 15  RALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + L+P     N +   L  +KN + A++ F  ++  G    D  T+  +I+ L    +L 
Sbjct: 362 KGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC-KPDEFTYSILIDSLCYERRLK 420

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +L +M   G   +  ++  LI+   K   ++++ +IFD M+ LGV RS  +Y+ L 
Sbjct: 421 EALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLI 480

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + +  R   A +  ++M+ EG++P + TYN +L  F     +E A    + M S G  
Sbjct: 481 DGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCE 540

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            D+ TY T+I G  R  ++D A KL   ++ K I  T  +Y  +I+     +R  + +R+
Sbjct: 541 PDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRL 600

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F EM      P+A+T+  +  GLC+ G                                 
Sbjct: 601 FREMMEKSDPPDALTHKIVFRGLCNGG--------------------------------- 627

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
             G +  A D    M+   I  E   +G L E  C   M D  I+L++ ++EK
Sbjct: 628 --GPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEK 678



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/539 (21%), Positives = 213/539 (39%), Gaps = 81/539 (15%)

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE------------------- 214
           S   ++     + +KS G   +  T+ T+I  +  F +++                    
Sbjct: 68  SSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFKPDTNFYN 127

Query: 215 --------------AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
                          E L ++M  + I   V ++  +IK      +   A+ + +EM + 
Sbjct: 128 IALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANH 187

Query: 261 DVKPNAVTYTALLP-----------------------------------GLCDAGKMVEV 285
            +KP+ +T+T L+                                    G C  G++ E 
Sbjct: 188 GLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEA 247

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            + + E+ E    P D   F  L+   C+ G++N A D++  MI      +   Y  LI 
Sbjct: 248 LRFVLEVSEEGFSP-DQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLIS 306

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CK   +++AI++L +++ +E    P +       +YN +I  LC   +   A    R 
Sbjct: 307 GMCKLGEFEKAIEILQQMILREC--SPNTV------TYNTLISALCKENEIEAATDLARI 358

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           L+ KG+L D   FN LI+G     N D A E+ + M  +G   D   Y  LI+S   +  
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERR 418

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +A   L  M   G +  + ++ ++++ L +  R++ A  +   M   GV  +      
Sbjct: 419 LKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNT 478

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           +++ L     VEEA   +D M+  G  P+   ++SLL+     G    A  ++       
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           C  D+ +Y  ++  L  AG+   A  +L  +  KG V    + + +I  L     TK+ 
Sbjct: 539 CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEG 597



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 87/413 (21%), Positives = 169/413 (40%), Gaps = 16/413 (3%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           D    +  ++KS    PNA T+  L+    +  ++  + K+L    E    P D + +  
Sbjct: 72  DSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKP-DTNFYNI 128

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
            L    +   L     +   M+   I  +   + +LI+  CKA     AI +L+++    
Sbjct: 129 ALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHG 188

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSK 426
             L+P         ++  ++Q     G    A    +Q++  G +L  V+   L+ G  K
Sbjct: 189 --LKPDEI------TFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           EG  + A   V  +   G   D   +  L+  + R G   DA   +D MIE G  P    
Sbjct: 241 EGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYT 300

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           + S++  + + G  + A  +++ M+ +    N      ++ AL     +E A     +++
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV 360

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
             G +P+   F++L+  L        A+++ +    + C  D  +Y  ++D+L    +  
Sbjct: 361 SKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLK 420

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMSRGS 655
            A  +L ++   G   +    + LI GL +    + A +I  +M    +SR S
Sbjct: 421 EALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS 473



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 112/263 (42%), Gaps = 35/263 (13%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L  ++  E A + F  +E  G+ +    T+  +I+ L +  ++  A  ++  M
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGV-SRSSVTYNTLIDGLCKNKRVEEASQLMDQM 499

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G++ D+  +  L+  + + G ++++  I   M   G E  + +Y  L   + R GR 
Sbjct: 500 IMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRV 559

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
            +A +    +  +GI  T H YN ++   F+  + +  +R F +M  +    D +T+  +
Sbjct: 560 DVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIV 619

Query: 203 INGY-NRFKKMDEAEKLFAEMKEKNIEPTVISY--------------------------- 234
             G  N    + EA     EM EK I P   S+                           
Sbjct: 620 FRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKA 679

Query: 235 ------TTMIKGYVAVERADDAL 251
                 T+MI+G++ + + +DAL
Sbjct: 680 QMSERETSMIRGFLKIRKFNDAL 702


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 214/462 (46%), Gaps = 29/462 (6%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G++ D   F +LI  + + G+   S  IF  + + G   +  +++ L K +  +G 
Sbjct: 87  MELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGH 146

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A  + +K++++G    + +Y  ++ G     ++  A++  + +  + +  + V YN 
Sbjct: 147 IHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 206

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+   + K +++A  L+++M  K I P V +Y  +I G+ AV + + A+ +F++MK  +
Sbjct: 207 IIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKEN 266

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + PN  T+  L+ G C  GK+ + + VL  M++  I P D   +  L+   C    +N A
Sbjct: 267 INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKP-DVVTYNSLMDGYCSINKVNKA 325

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII---LRPQSTLD- 377
            D+  +M    +      Y  ++  FCK +M D AI L +++  ++II   +   S +D 
Sbjct: 326 KDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385

Query: 378 -----------------------MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
                                      +Y+ ++  LC N    KA      L  +G+  D
Sbjct: 386 LCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              +  LI+G  + G  + A  + + +  +G   D  AY  +I+ +  KG    A   L 
Sbjct: 446 MYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLS 505

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            M ++G  P +  +  V+ SLFE     TA ++++ M+ +G+
Sbjct: 506 KMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 113/508 (22%), Positives = 230/508 (45%), Gaps = 32/508 (6%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FNK+LS  ++   H+               TA+   + M+  GI  D  T+N +IN +++
Sbjct: 64  FNKILSSLVKAKHHS---------------TALSLHQQMELNGIESDFFTFNILINCFSQ 108

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
                 +  +FA++ +K   PT I++ T+IKG         AL   D++ +     + V+
Sbjct: 109 LGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVS 168

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKA 327
           Y  L+ GLC  G++    ++L+ +  + + P  N+V +  ++   CK+  +N A D+   
Sbjct: 169 YGTLINGLCKVGRITAALQLLKRVDGKLVQP--NAVMYNMIIDNMCKAKLVNDAFDLYSQ 226

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M+   I  +   Y  LI  F      + AI L +K+ ++ I        +    ++N ++
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENI--------NPNVYTFNILV 278

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
              C  G+   A++    +MK  +  D V +N+L+ G+      + A +I   M   GV 
Sbjct: 279 DGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVI 338

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            +   Y  ++  + +     +A    + M      P    + S+++ L + GR+  A ++
Sbjct: 339 ANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKL 398

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           +  M ++G   N+   + IL+AL    HV++A+  +  +   G  P+   +  L+  L +
Sbjct: 399 VDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQ 458

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+   A  + +  L +   +D+ +Y  ++      G    A ++L K+ + G + + K+
Sbjct: 459 SGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKT 518

Query: 624 SDKLIAGLNQEGNTKQADILSR--MIRG 649
            + +I  L ++     A+ L R  ++RG
Sbjct: 519 YELVILSLFEKDENDTAEKLLREMIVRG 546


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/509 (23%), Positives = 220/509 (43%), Gaps = 16/509 (3%)

Query: 64  EILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           ++L  + ++ H   +L     M   G+  +     +LI S+     +  +  +   + +L
Sbjct: 59  KLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKL 118

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G + S  ++  L + +   G+   A + F+KM  EG +P   TY  ++ G        TA
Sbjct: 119 GYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTA 178

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           IRF   M+ R     VV Y+T+I+   + +++ EA  LF++M  K I P   +Y+++I G
Sbjct: 179 IRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHG 238

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              +    +A+R+F  M    + P+ +T+  L+  LC  G +V+   V+  M++  + P 
Sbjct: 239 LCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKP- 297

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+   C    +    +V   M+R         Y  LI  +CK ++ D+A+ L 
Sbjct: 298 DVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLF 357

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNN 419
           +++ ++ +I  P +       +YN +I  LCH G+   A   F +++  G + D V +  
Sbjct: 358 EEMSQQGLI--PDTV------TYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L     K      A  ++K++    +  D   Y  +++   R GE   A+     +   G
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  ++  L + G +  AS++   M E G   N      I    L       A+
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAI 529

Query: 540 GRIDLMMQSG---SVPNFDSLLSVLSEKG 565
                M+  G    V     L+ +LS+ G
Sbjct: 530 QLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/533 (22%), Positives = 232/533 (43%), Gaps = 13/533 (2%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++ +F+ M ++    S+  +  L   I R   Y      + +M S GI    +T N+
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    +L  A     D+   G      T+ T+I G     K+ EA +LF +M  + 
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P V++Y T+I G   V     A+R    M+  + +P  V Y+ ++  LC   ++ E  
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +  +M+ + I P +N  +  L+   C  GH   A  +  AMI   I  +   +  L++ 
Sbjct: 215 SLFSDMLAKGISP-NNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 273

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK  M  +A  ++D ++        QS L  +  +YN ++   C   + GK    F  +
Sbjct: 274 LCKEGMVVKAHYVVDVMI--------QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTM 325

Query: 407 MKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           ++KG +  V ++  LI G+ K    D A  + + M ++G+  D   Y  LI      G  
Sbjct: 326 VRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 385

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            DA      M+  G  P    +R + + L ++ R+  A  ++K +    +  ++ + + +
Sbjct: 386 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 445

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           ++ +   G +E A      +   G  P+   +  +++ L ++G    A KL        C
Sbjct: 446 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGC 505

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             +  +Y  +    L   +TL A  +  +++ +G   D  ++  L+  L+ +G
Sbjct: 506 SPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 215/507 (42%), Gaps = 13/507 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ S  +       + ++  M   G+  +  + + L        R   A      +L
Sbjct: 57  FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDIL 116

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G +P+  T+  ++ G  +  K+  A++ F+ M   G   DV+TY T+ING  +     
Sbjct: 117 KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTS 176

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A +    M+++N  PTV+ Y+T+I       +  +AL +F +M +  + PN  TY++L+
Sbjct: 177 TAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLI 236

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GLC  G   E  ++   M+ R I P D   F  L+   CK G +  A  V+  MI+  +
Sbjct: 237 HGLCILGHWKEAIRLFYAMIHRKIMP-DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDL 295

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y  L++  C      + + + D +V K  +  P         SY  +I   C  
Sbjct: 296 KPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV--P------SVISYTTLINGYCKI 347

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
               KA   F ++ ++G++ D V +N LI G    G    A  +   M   G   D   Y
Sbjct: 348 QIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTY 407

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L +   +    A+A   L  +      P   ++  VM+ +   G ++ A  +   +  
Sbjct: 408 RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS 467

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           KG+  ++     ++  L  +G + EA      M ++G  PN   ++ +        +T+ 
Sbjct: 468 KGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLR 527

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDAL 596
           A++L    L R   ID+++   +++ L
Sbjct: 528 AIQLFQEMLSRGFSIDVSTTTLLVEML 554



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/498 (22%), Positives = 215/498 (43%), Gaps = 13/498 (2%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           K+    L  ++ ++  G+  H+  T   +I     + +L  A  +L D+ K G Q     
Sbjct: 68  KHYSTVLSLYKQMDSFGI-PHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTAT 126

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI     +G + E++++FD M   G +  V +Y  L   + + G    A R+   M 
Sbjct: 127 FTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSME 186

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
                PT   Y+ ++       +L  A+  F DM ++GIS +  TY+++I+G        
Sbjct: 187 QRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWK 246

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA +LF  M  + I P  +++ T++           A  + D M   D+KP+ VTY +L+
Sbjct: 247 EAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLM 306

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C   +M +   V   MV +   P   S +  L+   CK   ++ A  + + M +  +
Sbjct: 307 DGHCLRSEMGKTVNVFDTMVRKGCVPSVIS-YTTLINGYCKIQIMDKAMGLFEEMSQQGL 365

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y  LI   C       AI L  ++V    I  P      +  +Y  +  +LC N
Sbjct: 366 IPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQI--P------DLVTYRILFDYLCKN 417

Query: 394 GQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            +  +A +  + +++   LDP    ++ ++ G  + G  ++A ++   +  +G+  D   
Sbjct: 418 HRLAEAMVLLK-VIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRT 476

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  +I    ++G  A+A      M E+G SP +  +  +      +     A ++ + M+
Sbjct: 477 YTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEML 536

Query: 512 EKGVKENLDLVAKILEAL 529
            +G   ++     ++E L
Sbjct: 537 SRGFSIDVSTTTLLVEML 554



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 184/397 (46%), Gaps = 16/397 (4%)

Query: 28  NVLHGAKNSEHALQFFRWVERAGLFNHDRET---HLKMIEILGRVGKLNHARCILLDMPK 84
           N L    N+  A++F R +E+       R T   +  +I+ L +  +L  A  +  DM  
Sbjct: 167 NGLCKVGNTSTAIRFLRSMEQRNC----RPTVVVYSTIIDSLCKDRQLTEALSLFSDMLA 222

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           KG+  +   +  LI      G  +E++++F  M    +     +++ L   + + G  + 
Sbjct: 223 KGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVK 282

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A    + M+   ++P   TYN ++ G  L  ++   +  F+ M  +G    V++Y T+IN
Sbjct: 283 AHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLIN 342

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           GY + + MD+A  LF EM ++ + P  ++Y T+I G   V R  DA+ +F EM  +   P
Sbjct: 343 GYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP 402

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + VTY  L   LC   ++ E   +L+ +    + P D  ++  ++   C++G L AA D+
Sbjct: 403 DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP-DIHIYSIVMDGMCRAGELEAARDL 461

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              +    +  +   Y I+I   C+  +   A KL  ++ E      P       A +YN
Sbjct: 462 FSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGC--SPN------ACTYN 513

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
            + +    N +T +A   F++++ +G    V+   L+
Sbjct: 514 LITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLL 550



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/500 (21%), Positives = 209/500 (41%), Gaps = 48/500 (9%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   FN+ML     P+   ++ +L          T +  ++ M S GI  +  T N +IN
Sbjct: 38  ALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILIN 97

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            +    ++  A  +  ++ +   +P+  ++TT+I+G     +  +AL++FD+M     +P
Sbjct: 98  SFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQP 157

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + +TY  L+ GLC  G      + LR M +R                 C+          
Sbjct: 158 DVLTYGTLINGLCKVGNTSTAIRFLRSMEQR----------------NCR---------- 191

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
                    PT    Y  +I++ CK      A+ L   ++ K I   P +       +Y+
Sbjct: 192 ---------PTVVV-YSTIIDSLCKDRQLTEALSLFSDMLAKGI--SPNNF------TYS 233

Query: 385 PMIQHLCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I  LC  G   +A  +F+  + +K + D + FN L+    KEG    A  +V +M + 
Sbjct: 234 SLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS 293

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
            +  D   Y  L++ +  + E        D+M+  G  P+   + +++    +   +  A
Sbjct: 294 DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKA 353

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSV 560
             + + M ++G+  +      ++  L   G + +A+     M+  G +P+  +   L   
Sbjct: 354 MGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDY 413

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L +  +   A+ LL    G +   D+  Y  V+D +  AG+   A  +  K+  KG   D
Sbjct: 414 LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 473

Query: 621 WKSSDKLIAGLNQEGNTKQA 640
            ++   +I GL Q+G   +A
Sbjct: 474 VRTYTIMINGLCQQGLLAEA 493



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 101/214 (47%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M ++G+  D   +  LI      G +++++ +F  M   G    + +Y  LF  + +  
Sbjct: 359 EMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNH 418

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R   A      +    ++P  H Y++++ G   + +LE A   F  + S+G+  DV TY 
Sbjct: 419 RLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYT 478

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            MING  +   + EA KLF EM E    P   +Y  + +G++       A+++F EM S 
Sbjct: 479 IMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR 538

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
               +  T T L+  L D G    V+++L E V+
Sbjct: 539 GFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/261 (19%), Positives = 102/261 (39%), Gaps = 38/261 (14%)

Query: 386 MIQHLCH------NGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           MI H  H      N       +F R L  +     V F+ L+   ++  +  +   + K 
Sbjct: 20  MISHAFHSKSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQ 79

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   G+P +      LI S+        A + L  +++ G+ P+++ F +++  L  +G+
Sbjct: 80  MDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK 139

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
           +  A ++   M  +G + +                                V  + +L++
Sbjct: 140 IGEALQLFDKMTGEGFQPD--------------------------------VLTYGTLIN 167

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            L + G T  A++ L     R+C   +  Y  ++D+L    +   A S+   ++ KG   
Sbjct: 168 GLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISP 227

Query: 620 DWKSSDKLIAGLNQEGNTKQA 640
           +  +   LI GL   G+ K+A
Sbjct: 228 NNFTYSSLIHGLCILGHWKEA 248


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 202/423 (47%), Gaps = 20/423 (4%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G++  +  +L+++ + G   +  ++  LI+   KKG ++++  +F  M + G+  +  +Y
Sbjct: 177 GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTY 236

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             L   + + G        + KM   G+ P  HTYN ++       + + A + F++M+ 
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRE 296

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           RG+S ++VTYNT+I G  R  K +EA ++  +MK   I P +I+Y T+I G+  V +   
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGK 356

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           AL +  ++KS  + P+ VTY  L+ G C  G      KV++EM ER I P     +  L+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP-SKVTYTILI 415

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
               +S ++  A  +  +M  L +  +   Y +LI  FC     + A +L   +VEK+  
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK-- 473

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEG 428
             P   +      YN M+   C  G + +A   FR++ +K +   VA +  +I    KE 
Sbjct: 474 FEPNEVI------YNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKER 527

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
               A  +V+ M   G+   +D+ + LI         + AK    S   D   PAS +F 
Sbjct: 528 KSKEAEGLVEKMIDSGIG-PSDSILNLI---------SRAKNDSHSRSMDEEEPASMVFD 577

Query: 489 SVM 491
            +M
Sbjct: 578 GLM 580



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 205/417 (49%), Gaps = 13/417 (3%)

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
            N   C   +  K  V  D   F ++I+   + G +++S  +   +++ G   +V  Y  
Sbjct: 145 FNQWWC-FFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTT 203

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L     ++G    AK  F +M   G+     TY V++ G F +   +     +E M+  G
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG 263

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           +  ++ TYN ++N   +  +  +A K+F EM+E+ +   +++Y T+I G     +A++A 
Sbjct: 264 VFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            + D+MKS  + PN +TY  L+ G C   K+ +   + R++  R + P   +  + + G 
Sbjct: 324 EVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK G  + A  V+K M    I      Y ILI+ F +++  ++AI+L   +  +E+ L 
Sbjct: 384 -CKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSM--EELGLT 440

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGN 429
           P      +  +Y+ +I   C  G+  +A   F+ +++K   +P  V +N ++ G+ KEG+
Sbjct: 441 P------DVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK-FEPNEVIYNTMVLGYCKEGS 493

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
              A  + + M  + +P +  +Y  +IE   ++ +  +A+  ++ MI+ G  P+ S+
Sbjct: 494 SYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSI 550



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/471 (23%), Positives = 212/471 (45%), Gaps = 12/471 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           ++EV+I +Y +   +  S+  F+ M   G       ++ L   ++    +     +FN+ 
Sbjct: 96  LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES 155

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
             + +    +++ +++ G   + ++E +     +++  G S +VV Y T+I+G  +  ++
Sbjct: 156 KIKVVLDV-YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           ++A+ LF EM +  +     +YT +I G            ++++M+   V PN  TY  +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCV 274

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  G+  +  KV  EM ER +   +   +  L+G  C+    N A +V+  M    
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSC-NIVTYNTLIGGLCREMKANEANEVMDQMKSDG 333

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I      Y  LI+ FC      +A+ L   L  K   L P         +YN ++   C 
Sbjct: 334 INPNLITYNTLIDGFCGVRKLGKALSLCRDL--KSRGLSPSLV------TYNILVSGFCK 385

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G T  A    +++ ++G+    V +  LI   ++  N + A ++   M   G+  D   
Sbjct: 386 KGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHT 445

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI  +  KG   +A     SM+E    P   ++ +++    ++G    A R+ + M 
Sbjct: 446 YSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREME 505

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
           EK +  N+     ++E L      +EA G ++ M+ SG  P+ DS+L+++S
Sbjct: 506 EKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS-DSILNLIS 555



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 142/280 (50%), Gaps = 1/280 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V N L     ++ A + F  +   G+ + +  T+  +I  L R  K N A  ++  M
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRERGV-SCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              G+  +   +  LI+ +     + +++ +   +K  G+  S+ +Y+ L     ++G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +   +M   GI+P++ TY +++  F  S  +E AI+    M+  G++ DV TY+ +
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVL 449

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G+    +M+EA +LF  M EK  EP  + Y TM+ GY     +  ALR+F EM+  ++
Sbjct: 450 IHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
            PN  +Y  ++  LC   K  E + ++ +M++  I P D+
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDS 549



 Score = 43.1 bits (100), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 55/307 (17%), Positives = 120/307 (39%), Gaps = 75/307 (24%)

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
           T++  Y ++I  + +++  D +I   +++V+K  +  P S      + +N ++  +  + 
Sbjct: 92  TKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFV--PGS------NCFNNLLTFVVGSS 143

Query: 395 QTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
              +   FF +   K VLD  +F  +I+G  + G  + +F++                  
Sbjct: 144 SFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDL------------------ 185

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           L+E  LR               E G SP   ++ ++++   + G ++ A  +   M + G
Sbjct: 186 LVE--LR---------------EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
           +  N      ++  L   G  ++     + M + G  PN                     
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN--------------------- 267

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                      L +Y  V++ L   G+T +A+ +  ++ E+G   +  + + LI GL +E
Sbjct: 268 -----------LHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316

Query: 635 GNTKQAD 641
               +A+
Sbjct: 317 MKANEAN 323


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 149/585 (25%), Positives = 261/585 (44%), Gaps = 45/585 (7%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           +AE+A++  L   +  ++ + + +     L  A   E A    R +   G F  D  T+ 
Sbjct: 431 LAEKAYSEMLAAGV--VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG-FIPDTSTYS 487

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K++  L    K+  A  +  +M + G+  D   + ++++S+ K G+++++ K F+ M+++
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G   +V +Y AL    L+  +   A   F  MLSEG  P   TY+ ++ G   + ++E A
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            + FE M       DV  Y         FK+ D+  +           P V++Y  ++ G
Sbjct: 608 CQIFERMCGSKDVPDVDMY---------FKQYDDNSE----------RPNVVTYGALLDG 648

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +    R ++A ++ D M     +PN + Y AL+ GLC  GK+ E Q+V  EM E   P  
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
             + +  L+    K    + A+ VL  M+  S       Y  +I+  CK    D A KL+
Sbjct: 709 LYT-YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK---KGVL-DPVA 416
             + EK    +P         +Y  MI      G  GK E     L +   KGV  + V 
Sbjct: 768 QMMEEKGC--QPN------VVTYTAMIDGF---GMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  LI    K G  D A  +++ M +   P     Y  +IE +    E  ++   LD + 
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIG 874

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV--EKGVKENLDLVAKILEALLMRGH 534
           +D  +P  S++R ++++L +  R++ A R+++ +      + +       ++E+L +   
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934

Query: 535 VEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDF 576
           VE A      M + G +P   +F SL+  L    K   A+ LLDF
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDF 979



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 131/561 (23%), Positives = 252/561 (44%), Gaps = 35/561 (6%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K +  M   GV  +  +  +  + +   G+Y  A     +M+ +G  P   TY+ +L   
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + K+E A   FE+MK  G+  DV TY  M++ + +   +++A K F EM+E    P V
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++YT +I  Y+  ++   A  +F+ M S    PN VTY+AL+ G C AG++ +  ++   
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613

Query: 292 M--------VERYIPPKDNS-------VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           M        V+ Y    D++        +  LL   CKS  +  A  +L AM        
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI-QHLCHNGQ 395
              Y  LI+  CK    D A ++  ++ E        +TL     +Y+ +I ++     Q
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF----PATL----YTYSSLIDRYFKVKRQ 725

Query: 396 TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
              +++  + L      + V +  +I G  K G  D A++++++M  +G   +   Y  +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+ +   G+       L+ M   G +P    +R +++   ++G +  A  +++ M +   
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             +     K++E         E+LG +D + Q  + P    +  L+  L +  +   A++
Sbjct: 846 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903

Query: 573 LL-DFCLGRDCIIDLAS-YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           LL +       ++D +S Y  ++++L  A K   A+ +  ++ +KG + + +S   LI G
Sbjct: 904 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963

Query: 631 LNQEGNTKQA----DILSRMI 647
           L +     +A    D +S M+
Sbjct: 964 LFRNSKISEALLLLDFISHMV 984



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 131/698 (18%), Positives = 262/698 (37%), Gaps = 74/698 (10%)

Query: 11  QNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           Q  +R    +   +LV  VL         + FF W  R   + H    +  +++++ R  
Sbjct: 120 QKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDD 179

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
                   L  +     +   +   VL+  + + G    +++    +K      S  +Y+
Sbjct: 180 DEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 239

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L +  L+  R   A     +M    +     T     +      K   A+   E   + 
Sbjct: 240 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TE 296

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
               D V Y  +I+G       +EA      M+  +  P V++Y+T++ G +  ++    
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
            R+ + M      P+   + +L+   C +G      K+L++MV+    P    V+  L+G
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP-GYVVYNILIG 415

Query: 311 VQC------KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
             C          L+ A      M+   +     +        C A  Y++A  ++ +++
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRG 423
            +  I  P      + S+Y+ ++ +LC+  +   A + F ++ + G V D   +  ++  
Sbjct: 476 GQGFI--P------DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K G  + A +    M   G   +   Y  LI +YL+  + + A    ++M+ +G  P 
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMV----------------EKGVKENLDLVAKILE 527
              + ++++   + G+V+ A ++ + M                 +   + N+     +L+
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK------------------ 566
                  VEEA   +D M   G  PN   +D+L+  L + GK                  
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707

Query: 567 ---TIA--------------AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
              T +              A K+L   L   C  ++  Y +++D L   GKT  AY ++
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
             + EKG   +  +   +I G    G  +   ++L RM
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805


>gi|356507504|ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Glycine max]
          Length = 555

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/531 (25%), Positives = 239/531 (45%), Gaps = 11/531 (2%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           SV S+ A+F  +    R   A R FN M   G +P    Y+V++ G+    +LE AI F 
Sbjct: 12  SVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEEAISFL 71

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
             ++  G++L +  Y+++I G+   ++ +EA   +  M +K I P V+ YT +I+G  + 
Sbjct: 72  RLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTILIRGLSSE 131

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            R  +A ++  EM    + P+AV Y  ++ GLCD G +++  + L+  +  +    +   
Sbjct: 132 GRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGLCDVG-LLDRARSLQLEISEHQGFHNVCT 190

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL- 363
              ++   CK G    A ++   M +L        +  L++  CKA   + A  LL K+ 
Sbjct: 191 HTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLYKME 250

Query: 364 --VEKEIILRPQSTLD--MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
                 +  R     D  +++ +    ++ +C  GQ   A     QL   GV+ D V +N
Sbjct: 251 IGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMPDIVTYN 310

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            LI G  K  N + A ++ K M  +G+  +   Y  LI+   R G   DA      M++ 
Sbjct: 311 VLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKIHKHMLKH 370

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P+  ++R++M  L    RV  A  +    + K ++   D     LE   +RG VE+A
Sbjct: 371 GCEPSFEVYRALMTWLCRKKRVSQAFSLYLEYL-KNLRGREDNSINALEECFVRGEVEQA 429

Query: 539 ---LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
              L  +D   +  ++  +  LL    +  K   A+ +       +  I+ AS   ++  
Sbjct: 430 FRGLLELDFRFRDFALAPYTILLIGFCQAEKVNEALLIFTVLDKFNININPASCVYLIRG 489

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRM 646
           L   G+  +A +I    ++KG        ++L+  L+Q+      D++ RM
Sbjct: 490 LSENGRLDDAVNIFVYTLDKGFKLKSSVCEQLLKILSQDKKECAIDLVPRM 540



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 15/229 (6%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K +E +   G+L  A  +L+ +   GV  D   + VLI  + K   +  ++K+F  M+  
Sbjct: 276 KKVEQMCEAGQLLDAYKLLIQLAGSGVMPDIVTYNVLINGFCKASNINGALKLFKDMQNK 335

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF----LSLK 176
           G+  +  +Y  L   + R GR   A +    ML  G EP+   Y  ++        +S  
Sbjct: 336 GLSPNPVTYGTLIDGLFRVGREEDAFKIHKHMLKHGCEPSFEVYRALMTWLCRKKRVSQA 395

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI---EPTVIS 233
               + + ++++ R         +  IN         E E+ F  + E +    +  +  
Sbjct: 396 FSLYLEYLKNLRGR--------EDNSINALEECFVRGEVEQAFRGLLELDFRFRDFALAP 447

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           YT ++ G+   E+ ++AL IF  +  F++  N  +   L+ GL + G++
Sbjct: 448 YTILLIGFCQAEKVNEALLIFTVLDKFNININPASCVYLIRGLSENGRL 496


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 214/457 (46%), Gaps = 10/457 (2%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L R  ++  A   L  + ++G   +   F  +I+ + ++G VQE++++FD MK+ G+   
Sbjct: 256 LSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPD 315

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
             SY  L   + ++G  +       +M   GI PT  +Y+ +L G   + K+E A   F 
Sbjct: 316 THSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFR 375

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
            ++ +G   D + Y+ ++NG  +   ++    L+ +M   N  P   +YT++I  +    
Sbjct: 376 RLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHR 435

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
              DAL +F+ M    V PN VT T L+ G     +M++   +    V ++    +  ++
Sbjct: 436 NLTDALGVFELMLDSGVSPNVVTCTILVDGF-GKERMIDEAFLFLHKVRQFGIVPNLCMY 494

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             ++   CK    +    +   MI+     +   Y I+I++F KA     A +L  K+++
Sbjct: 495 RVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLD 554

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
           +    +P         +Y  +I  LCH+ +  +    F+ ++ +G+  D + + +LI  +
Sbjct: 555 EGT--KPN------VFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCY 606

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K  N  +A EI + MG+ G+  DA  Y CLI  + +      A+  ++ M   G +P+ 
Sbjct: 607 CKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSV 666

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
             + +++   F+ G  + A+    SM++ G+  +  L
Sbjct: 667 VTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKL 703



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 117/548 (21%), Positives = 229/548 (41%), Gaps = 30/548 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY--GKKGIVQESVKIFDIMKQ 119
           +++ L    ++ +AR +  DM   G   +   + VL+ +Y  G +  + E+ ++   M+ 
Sbjct: 180 LLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEM 239

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR-HTYNVMLWGFFLSLKLE 178
            GV+ +  +Y   +   L R R + +   F +ML +   P   + +N ++ GF    +++
Sbjct: 240 KGVKPNAATYGT-YLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQ 298

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            AI  F+ MK  G+  D  +Y+ +++G  +   +     L  EM    I PT++SY++++
Sbjct: 299 EAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLL 358

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G     + + A  +F  ++    K + + Y+ +L G C    +  V  +  +MV     
Sbjct: 359 HGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFV 418

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D   +  L+   C+  +L  A  V + M+   +        IL++ F K  M D A  
Sbjct: 419 P-DAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFL 477

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAF 417
            L K+ +  I+  P   +      Y  +I  LC   ++      F  ++K+G V D V +
Sbjct: 478 FLHKVRQFGIV--PNLCM------YRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVY 529

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           + +I    K      AF +   M   G   +   Y  LI          +  T    MI 
Sbjct: 530 SIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIW 589

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           +G +P   L+ S++    +   ++ A  + + M + G+  +  L   ++           
Sbjct: 590 EGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIG---------- 639

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
             G   ++   G+      L+  ++ KG T + V   +  +G   I D        +++L
Sbjct: 640 --GFSKVLAMDGA----QCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSML 693

Query: 598 AAGKTLNA 605
            AG T +A
Sbjct: 694 QAGITPDA 701



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 104/249 (41%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D   +  +I    R   L  A  +   M   GV  +     +L++ +GK+ ++ E+ 
Sbjct: 417 FVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAF 476

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
                ++Q G+  ++  Y  +   + +  +       F  M+  G  P    Y++++  F
Sbjct: 477 LFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSF 536

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             +LKL  A R F  M   G   +V TY ++ING     ++ E   LF  M  + + P  
Sbjct: 537 VKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDR 596

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           I YT++I  Y        AL IF  M    +  +A  YT L+ G      M   Q ++ E
Sbjct: 597 ILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEE 656

Query: 292 MVERYIPPK 300
           M  + + P 
Sbjct: 657 MTNKGLTPS 665



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/440 (18%), Positives = 178/440 (40%), Gaps = 48/440 (10%)

Query: 234 YTTMIKGYVAVERADDALRI---------------------------------FDEMKSF 260
           Y T+I+ +V +   +DAL                                   FD+MKS 
Sbjct: 144 YATIIRIFVELSMFEDALLTYTEAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDMKSS 203

Query: 261 DVKPNAVTYTALLPGLCDAGK--MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
              PN  +Y+ L+       +  + E  ++L EM  + + P   +    L G+  ++  +
Sbjct: 204 GPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLS-RTRQV 262

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            +A + L+ + +   P     +  +I+ FC+      AI++ D +  K+  L P      
Sbjct: 263 ASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAM--KKGGLVP------ 314

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIV 437
           +  SY+ ++  LC  G          ++ + G+    V++++L+ G  + G  + AFE+ 
Sbjct: 315 DTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELF 374

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           + +  +G   D   Y  ++    +           + M+     P +  + S++ +    
Sbjct: 375 RRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRH 434

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
             +  A  V + M++ GV  N+     +++       ++EA   +  + Q G VPN   +
Sbjct: 435 RNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMY 494

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
             +++ L +  K+     +    + R  + D   Y  ++D+ + A K   A+ +  K+++
Sbjct: 495 RVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLD 554

Query: 615 KGGVTDWKSSDKLIAGLNQE 634
           +G   +  +   LI GL  +
Sbjct: 555 EGTKPNVFTYTSLINGLCHD 574


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 147/644 (22%), Positives = 272/644 (42%), Gaps = 42/644 (6%)

Query: 4   RAWTTRLQNKIRA---LVPQFDHNLVYNVLHG---AKNSEHALQFFRWVERAGLFNHDRE 57
           R  +TR  NK RA   L P      V ++      A     AL FF W+ R   F H  +
Sbjct: 32  RILSTRRWNKGRAYKRLAPSVTAAHVADLFRADSTAPEPATALAFFEWLARRDGFRHTAD 91

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM------------------------ 93
           +H  ++ +L R         +++ M        EDM                        
Sbjct: 92  SHAALLHLLSRRRAPAQYERLVVSMLNCS-DTAEDMRVSADAIQAIRRTGSARLALSPKC 150

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +   + S  +  + +   +++  + Q G+     +Y+ + K   + G    A RYF  +L
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+EP   T N ++ G+  + +L  A   F  M   G   +  +Y  +I G    K + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  LF  MK     P V ++T +I G     R  DA  +FD M    V P+ +TY A++
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G    G+M +  K+ +E++E+     D+  +  L+   C       A ++L   ++   
Sbjct: 331 VGYSKLGRMNDALKI-KELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGF 388

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 +  LI  +C AE +D A+++ +K++        +  LD++   +  +I  L   
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSS------KCKLDLQV--FGKLINSLIKK 440

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A+    ++   G++ + + + ++I G+ K G  D A E++K+M R G   +A  Y
Sbjct: 441 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 500

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L+   ++  +   A   L  M +DG  P    + ++++   ++     A R+ + M +
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
            G+K +    A + +AL   G  EEA   I     + +   + +L+   S+ G T  A  
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAAT 620

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L++  +   C  D  +Y  +L AL    +   A  IL ++  +G
Sbjct: 621 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 248/578 (42%), Gaps = 70/578 (12%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI  Y       +++++ + M     +  ++ +  L   ++++ R   AK   N++ 
Sbjct: 395 FTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEIS 454

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           + G+ P   TY  ++ G+  S K++ A+   + M+  G   +  TYN+++ G  + KK+ 
Sbjct: 455 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 514

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  L  +M++  I P VI+YTT+++G       D+A R+F+ M+   +KP+   Y  L 
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574

Query: 274 PGLCDAGKMVEVQKVL----------------------------REMVERYI---PPKDN 302
             LC AG+  E    +                              ++ER I      D+
Sbjct: 575 DALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +  LL   CK   LN A  +L  M    I      Y ILI+   +   +D A ++ ++
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
           +          S     A++Y   I   C  G+   AE    ++ ++GV  D V +N LI
Sbjct: 695 MT--------SSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 746

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA---------- 471
            G    G  D AF  +K M       +   Y CL+  +L KG  A  ++           
Sbjct: 747 DGCGHMGYIDRAFSTLKRMVGASCEPNYWTY-CLLLKHLLKGNLAYVRSVDTSGMWNLIE 805

Query: 472 -------LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
                  L+ M++ G +P  + + S++    + GR++ A  ++  M  KG+  N D+   
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFC---- 577
           +++        E+AL  + +M + G  P  +S   L+  L  +G     VK L FC    
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGD-FEKVKSL-FCDLLE 923

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           LG +   D  +++ + D LL AG     + +L  IMEK
Sbjct: 924 LGYN--HDEVAWKILNDGLLKAGYVDICFQML-SIMEK 958



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 138/625 (22%), Positives = 275/625 (44%), Gaps = 60/625 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M E +GRV            + + G+  D   +  +I+SY K+G +  + + F ++ + G
Sbjct: 163 MTEYMGRVYS---------QLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGG 213

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +E    + +AL     R G    A   F  M   G +   ++Y +++ G   +  +  A+
Sbjct: 214 LEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKAL 273

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F  MK  G S +V  +  +I+G  +  ++ +A  LF  M +  + P+V++Y  MI GY
Sbjct: 274 VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGY 333

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK- 300
             + R +DAL+I + M+     P+  TY  L+ GLCD  K  E +++L   V+    P  
Sbjct: 334 SKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTV 392

Query: 301 ---------------------------------DNSVFMKLLGVQCKSGHLNAAADVLKA 327
                                            D  VF KL+    K   L  A ++L  
Sbjct: 393 VTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNE 452

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           +    +      Y  +I+ +CK+   D A+++L K++E++   +P       A +YN ++
Sbjct: 453 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-KMMERDGC-QPN------AWTYNSLM 504

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             L  + +  KA     ++ K G++ + + +  L++G   E + D+AF + ++M + G+ 
Sbjct: 505 YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 564

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D  AY  L ++  + G    A+ A   ++  G +     + ++++   + G    A+ +
Sbjct: 565 PDEHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 621

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSE 563
           ++ M+++G   +    + +L AL  +  + EAL  +D M   G   ++  +  L+  +  
Sbjct: 622 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 681

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
           +GK   A ++ +            +Y   +++    G+  +A  ++ K+  +G   D  +
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741

Query: 624 SDKLIAGLNQEGNTKQA-DILSRMI 647
            + LI G    G   +A   L RM+
Sbjct: 742 YNILIDGCGHMGYIDRAFSTLKRMV 766



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 175/411 (42%), Gaps = 61/411 (14%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I+   + G  + A  ++  M  +G   D   + VL+ +  K+  + E++ I D M 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
             G++ ++ +Y  L   +LR G++  AKR +N+M S G +P+  TY V +  +    +LE
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT-- 236
            A      M+  G++ DVVTYN +I+G      +D A      M   + EP   +Y    
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 237 --MIKGYVAVERA------------DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
             ++KG +A  R+            D   ++ + M    + P   TY++L+ G C AG++
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E   +L  M  + + P ++                                     Y +
Sbjct: 842 EEACLLLDHMCGKGLSPNEDI------------------------------------YTL 865

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           LI+  C  + +++A+  +   +  E   +PQ        SY  ++  LC+ G   K +  
Sbjct: 866 LIKCCCDTKFFEKALSFVS--IMSECGFQPQ------LESYRLLVVGLCNEGDFEKVKSL 917

Query: 403 FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           F  L++ G   D VA+  L  G  K G  D  F+++ IM +R     +  Y
Sbjct: 918 FCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY 968



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 17/277 (6%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           +HA + +  +  +G       T+   I    + G+L  A  ++L M ++GV  D   + +
Sbjct: 686 DHAKRMYNEMTSSG-HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR-----------RGRYMMA 145
           LI+  G  G +  +      M     E +  +Y  L K +L+            G + + 
Sbjct: 745 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLI 804

Query: 146 K-----RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +     +   +M+  G+ PT  TY+ ++ GF  + +LE A    + M  +G+S +   Y 
Sbjct: 805 ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYT 864

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I      K  ++A    + M E   +P + SY  ++ G       +    +F ++   
Sbjct: 865 LLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLEL 924

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
               + V +  L  GL  AG +    ++L  M +RY 
Sbjct: 925 GYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYC 961



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 9/176 (5%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQES 110
            N    T+  +I    + G+L  A C+LLD M  KG+  +ED++ +LI+        +++
Sbjct: 821 LNPTVTTYSSLIAGFCKAGRLEEA-CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKA 879

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           +    IM + G +  ++SY  L   +   G +   K  F  +L  G       + ++  G
Sbjct: 880 LSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDG 939

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE-AEKLFAEMKEK 225
              +  ++   +    M+ R   +   TY  + N      KM E +  L +E++E+
Sbjct: 940 LLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN------KMHEVSSSLVSEVREE 989


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/567 (24%), Positives = 247/567 (43%), Gaps = 44/567 (7%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L  + D  LV  VL         +QFF+W  +   F HD  T++ +I  
Sbjct: 75  WGPDAEKALEVLKLKLDIRLVREVLKIDVEVHVKIQFFKWAGKKRNFEHDSTTYMALIRC 134

Query: 66  LGR---VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           L     VG+L      + DM K            +++  G+  +V +++ IF  +K    
Sbjct: 135 LDENRLVGELWRT---IQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGRKC 191

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAI 181
             +  +Y+++  ++++ G +      +N+M SEG   P   TY+ ++  F    + ++A+
Sbjct: 192 RPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAV 251

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R F++MK  G+      Y T++  Y +  K++EA  L  EM+ +   PTV +YT +I+G 
Sbjct: 252 RLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGL 311

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK- 300
               R +DA  ++  M     KP+ V    L+  L  + ++ E  ++  EM      P  
Sbjct: 312 GKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNV 371

Query: 301 --DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
              N++   L   +        A+  L+ M +  +   +  Y ILI+ FCK    ++A+ 
Sbjct: 372 VTYNTIIKSLFEDKAPPSE---ASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALL 428

Query: 359 LLDKLVEKEIILRPQSTLDM----------EASS-----------------YNPMIQHLC 391
           LL+++ EK     P +   +          EA++                 Y  MI+H  
Sbjct: 429 LLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFG 488

Query: 392 HNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G+  +A   F ++ K G + D  A+N LI G  +    D AF + + M   G   D +
Sbjct: 489 KCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDIN 548

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           ++  ++    R G P  A      M      P +  + +V+  L   G  + A+++MK M
Sbjct: 549 SHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEM 608

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEE 537
             KG + +L   + ILEA+   G V+E
Sbjct: 609 NSKGFEYDLITYSSILEAV---GKVDE 632



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/469 (21%), Positives = 193/469 (41%), Gaps = 48/469 (10%)

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMI 238
           A+  F  +K R       TYN++I    +    ++  +L+ EM  E +  P  ++Y+ +I
Sbjct: 179 ALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALI 238

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
             +  + R D A+R+FDEMK   ++P A  YT L+      GK+ E   ++ EM  R   
Sbjct: 239 SAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCV 298

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P   + + +L+    KSG +  A  V K M++     +      LI    +++    A++
Sbjct: 299 PTVYT-YTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVE 357

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFN 418
           L +               +M   +  P +                           V +N
Sbjct: 358 LFE---------------EMRLLNCTPNV---------------------------VTYN 375

Query: 419 NLIRGHSKEGNPDS-AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
            +I+   ++  P S A   ++ M + GV   +  Y  LI+ + +      A   L+ M E
Sbjct: 376 TIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDE 435

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G  P  + + S++ SL +  R + A+ + + + E     ++ + A +++     G   E
Sbjct: 436 KGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNE 495

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A+G  + M + G +P+   +++L++ +        A  L        C  D+ S+  +L+
Sbjct: 496 AMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILN 555

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            L   G    A  +  K+       D  S + ++  L++ G  ++A  L
Sbjct: 556 GLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKL 604



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 7/246 (2%)

Query: 5   AWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
           +W  R++     +VP  F ++++ +        E AL     ++  G F      +  +I
Sbjct: 393 SWLERMKKD--GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKG-FPPCPAAYCSLI 449

Query: 64  EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
             LG+  +   A  +  ++ +        ++ V+I+ +GK G   E++ +F+ MK+LG  
Sbjct: 450 NSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCI 509

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
             V +Y+AL   ++R      A   F  M   G  P  +++N++L G   +   + A+  
Sbjct: 510 PDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEM 569

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  MKS  I  D V+YNT++   +R    +EA KL  EM  K  E  +I+Y+++++   A
Sbjct: 570 FAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILE---A 626

Query: 244 VERADD 249
           V + D+
Sbjct: 627 VGKVDE 632


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 149/585 (25%), Positives = 262/585 (44%), Gaps = 45/585 (7%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           +AE+A++  L   +  ++ + + +     L  A   E A    R +   G F  D  T+ 
Sbjct: 390 LAEKAYSEMLAAGV--VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG-FIPDTSTYS 446

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K++  L    K+  A  +  +M + G+  D   + ++++S+ K G+++++ K F+ M+++
Sbjct: 447 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 506

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G   +V +Y AL    L+  +   A   F  MLSEG  P   TY+ ++ G   + ++E A
Sbjct: 507 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 566

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            + FE M       DV  Y         FK+ D+  +           P V++Y  ++ G
Sbjct: 567 CQIFERMCGSKDVPDVDMY---------FKQYDDNSE----------RPNVVTYGALLDG 607

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +    R ++A ++ D M     +PN + Y AL+ GLC  GK+ E Q+V  EM E   P  
Sbjct: 608 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 667

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
             + +  L+    K    + A+ VL  M+  S       Y  +I+  CK    D A KL+
Sbjct: 668 LYT-YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 726

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK---KGVL-DPVA 416
             + EK    +P         +Y  MI      G  GK E     L +   KGV  + V 
Sbjct: 727 QMMEEKGC--QPNVV------TYTAMIDGF---GMIGKIETCLELLERMGSKGVAPNYVT 775

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  LI    K G  D A  +++ M +   P     Y  +IE + +  E  ++   LD + 
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIG 833

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV--EKGVKENLDLVAKILEALLMRGH 534
           +D  +P  S++R ++++L +  R++ A R+++ +      + +       ++E+L +   
Sbjct: 834 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 893

Query: 535 VEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDF 576
           VE A      M + G +P   +F SL+  L    K   A+ LLDF
Sbjct: 894 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDF 938



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 131/561 (23%), Positives = 252/561 (44%), Gaps = 35/561 (6%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K +  M   GV  +  +  +  + +   G+Y  A     +M+ +G  P   TY+ +L   
Sbjct: 393 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 452

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + K+E A   FE+MK  G+  DV TY  M++ + +   +++A K F EM+E    P V
Sbjct: 453 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 512

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++YT +I  Y+  ++   A  +F+ M S    PN VTY+AL+ G C AG++ +  ++   
Sbjct: 513 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 572

Query: 292 M--------VERYIPPKDNS-------VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           M        V+ Y    D++        +  LL   CKS  +  A  +L AM        
Sbjct: 573 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 632

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI-QHLCHNGQ 395
              Y  LI+  CK    D A ++  ++ E        +TL     +Y+ +I ++     Q
Sbjct: 633 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF----PATL----YTYSSLIDRYFKVKRQ 684

Query: 396 TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
              +++  + L      + V +  +I G  K G  D A++++++M  +G   +   Y  +
Sbjct: 685 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 744

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+ +   G+       L+ M   G +P    +R +++   ++G +  A  +++ M +   
Sbjct: 745 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 804

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             +     K++E         E+LG +D + Q  + P    +  L+  L +  +   A++
Sbjct: 805 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 862

Query: 573 LL-DFCLGRDCIIDLAS-YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           LL +       ++D +S Y  ++++L  A K   A+ +  ++ +KG + + +S   LI G
Sbjct: 863 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 922

Query: 631 LNQEGNTKQA----DILSRMI 647
           L +     +A    D +S M+
Sbjct: 923 LFRNSKISEALLLLDFISHMV 943



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 134/706 (18%), Positives = 269/706 (38%), Gaps = 90/706 (12%)

Query: 11  QNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           Q  +R    +   +LV  VL         + FF W  R   + H    +  +++++ R  
Sbjct: 79  QKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDD 138

Query: 71  KLNHARCILLDMPKKGVQW----DEDMF----EVLIESYGKKGIVQESVKIFDIMKQLGV 122
                      +P++ +Q     D+++F     VL+  + + G    +++    +K    
Sbjct: 139 DEK--------VPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRF 190

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             S  +Y+ L +  L+  R   A     +M    +     T     +      K   A+ 
Sbjct: 191 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 250

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
             E   +     D V Y  +I+G       +EA      M+  +  P V++Y+T++ G +
Sbjct: 251 LVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 307

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
             ++     R+ + M      P+   + +L+   C +G      K+L++MV+    P   
Sbjct: 308 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP-GY 366

Query: 303 SVFMKLLGVQCKSGH------LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
            V+  L+G  C          L+ A      M+   +     +        C A  Y++A
Sbjct: 367 VVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 426

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPV 415
             ++ +++ +  I  P      + S+Y+ ++ +LC+  +   A + F ++ + G V D  
Sbjct: 427 FSVIREMIGQGFI--P------DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 478

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +  ++    K G  + A +    M   G   +   Y  LI +YL+  + + A    ++M
Sbjct: 479 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 538

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV----------------EKGVKENL 519
           + +G  P    + ++++   + G+V+ A ++ + M                 +   + N+
Sbjct: 539 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 598

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK---------- 566
                +L+       VEEA   +D M   G  PN   +D+L+  L + GK          
Sbjct: 599 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 658

Query: 567 -----------TIA--------------AVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
                      T +              A K+L   L   C  ++  Y +++D L   GK
Sbjct: 659 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 718

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           T  AY ++  + EKG   +  +   +I G    G  +   ++L RM
Sbjct: 719 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 764


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 212/454 (46%), Gaps = 11/454 (2%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++ +F  M +     S+  ++ L   I++  +Y +      KM   GI    +T+N+
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    ++  A+     M   G   D VT  +++NG+ R  ++ +A  L  +M E  
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P +++Y  +I      +R +DA   F E++   ++PN VTYTAL+ GLC++ +  +  
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           ++L +M+++ I P +   +  LL    K+G +  A ++ + M+R+SI  +   Y  L+  
Sbjct: 246 RLLSDMIKKKITP-NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C  +  D A ++ D +V K  +         +  SYN +I   C   +       FR++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCL--------ADVVSYNTLINGFCKAKRVEDGMKLFREM 356

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            ++G++ + V +N LI+G  + G+ D A E    M   G+  D   Y  L+      GE 
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A    + M +         + +V+  + + G+V+ A  +  S+  KG+K ++     +
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
           +  L  +G + E       M Q G + N D  LS
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQEGLMKN-DCTLS 509



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/472 (22%), Positives = 221/472 (46%), Gaps = 19/472 (4%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           K R      D N + + +   K  +  +   + +E  G+ N D  T   +I       ++
Sbjct: 78  KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN-DLYTFNIVINCFCCCFQV 136

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  IL  M K G + D      L+  + ++  V ++V + D M ++G +  + +Y+A+
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + +  R   A  +F ++  +GI P   TY  ++ G   S +   A R   DM  + I
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
           + +V+TY+ +++ + +  K+ EA++LF EM   +I+P +++Y++++ G    +R D+A +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQ 316

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +FD M S     + V+Y  L+ G C A ++ +  K+ REM +R +   +   +  L+   
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQGF 375

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
            ++G ++ A +    M    I  +   Y IL+   C     ++A+ + + + ++E     
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE----- 430

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
              +D++  +Y  +I+ +C  G+  +A   F  L  KG+  D V +  ++ G   +G   
Sbjct: 431 ---MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
               +   M + G+ ++        +  L  G+   +   +  M+  G++P+
Sbjct: 488 EVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPS 531



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 189/421 (44%), Gaps = 13/421 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F+ M+     P+   +N +L       K +  I   + M+  GI  D+ T+N +IN +  
Sbjct: 73  FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++  A  +  +M +   EP  ++  +++ G+    R  DA+ + D+M     KP+ V 
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y A++  LC   ++ +     +E+  + I P +   +  L+   C S   + AA +L  M
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRP-NVVTYTALVNGLCNSSRWSDAARLLSDM 251

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           I+  I      Y  L++ F K      A +L +++V   I        D +  +Y+ ++ 
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI--------DPDIVTYSSLVN 303

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC + +  +A   F  ++ KG L D V++N LI G  K    +   ++ + M +RG+  
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +   Y  LI+ + + G+   A+     M   G SP    +  ++  L ++G ++ A  + 
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           + M ++ +  ++     ++  +   G VEEA      +   G  P+   + +++S L  K
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 565 G 565
           G
Sbjct: 484 G 484



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/479 (20%), Positives = 200/479 (41%), Gaps = 46/479 (9%)

Query: 175 LKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           +KL  AI  F DM KSR     +V +N +++   + KK D    L  +M+   I   + +
Sbjct: 64  IKLNDAIDLFSDMVKSRPFP-SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           +  +I  +    +   AL I  +M     +P+ VT  +L+ G C   ++ +   ++ +MV
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           E    P D   +  ++   CK+  +N A D  K + R  I      Y  L+   C +  +
Sbjct: 183 EIGYKP-DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
             A +LL  +++K+I   P         +Y+ ++     NG+  +A+  F ++++  + D
Sbjct: 242 SDAARLLSDMIKKKIT--PN------VITYSALLDAFVKNGKVLEAKELFEEMVRMSI-D 292

Query: 414 P--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           P  V +++L+ G       D A ++  +M  +G   D  +Y  LI  + +     D    
Sbjct: 293 PDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
              M + G    +  + ++++  F+ G V  A                            
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA---------------------------- 384

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
               +E   ++D    S  +  ++ LL  L + G+   A+ + +    R+  +D+ +Y  
Sbjct: 385 ----QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           V+  +   GK   A+S+   +  KG   D  +   +++GL  +G   + + L   ++ E
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/532 (22%), Positives = 241/532 (45%), Gaps = 33/532 (6%)

Query: 5   AWTTRLQNKIRALVPQF-DHNLV--YNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           A T  L + +R L+P F  H+ +   N    + +      FF W+     F H  +++  
Sbjct: 47  AQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCA 106

Query: 62  MIEILG-----------------RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKK 104
           M   L                  R GK + A      +   G +    +F+ L+ +Y   
Sbjct: 107 MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDS 166

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
           G V ++++ F +++    +        L   ++     +    +++++L  G  P    Y
Sbjct: 167 GFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYY 226

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N+++  F     +  A   F +++ RG+    V++NT+ING  + + +DE  +L   M+E
Sbjct: 227 NILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEE 286

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
             I P V +Y+ +I G     R D A ++FDEM+   ++PN +T+TAL+ G   + +M  
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDS 346

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
                 +M+   + P D  ++  LL   CK G +N A  ++  M  + +  +   Y  LI
Sbjct: 347 AMNTYHQMLTMGVKP-DLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + +CK    + A+++   + E+ ++L        +  ++  +I   C +G+   AE   R
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVL--------DNVAFTALISGFCRDGRVRDAERTLR 457

Query: 405 QLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           ++++ G+  D   +  +I G+ K+GN    F+++K M   G       Y  L+    ++G
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQG 517

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           +  +A   L++M+  G +P    +  ++E   ++G+   A  ++K   EKG+
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK---AEDLLKLRNEKGL 566



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 177/367 (48%), Gaps = 13/367 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +LI  + K+G ++++  IF+ +++ G+  +  S++ L   + +        R    M 
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
              I P   TY+V++ G     +L+ A + F++M+ RG+  + +T+  +I+G  R ++MD
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A   + +M    ++P ++ Y T++ G   V   + A ++ DEMK   +KP+ +TYT L+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  G +    ++ + M E  +   DN  F  L+   C+ G +  A   L+ M+   +
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGV-VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y ++I+ +CK        KLL     KE+ +           +YN ++  LC  
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLL-----KEMQINGHKP---GVITYNVLMNGLCKQ 516

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           GQ   A +    ++  GV  D + +N L+ GH K G    A +++K+   +G+  D   Y
Sbjct: 517 GQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYY 573

Query: 453 ICLIESY 459
             L+  Y
Sbjct: 574 TSLVSEY 580



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 180/367 (49%), Gaps = 13/367 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I    + G +  A+ I  ++ K+G++     F  LI    K   + E  ++   M++  
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +   V +Y  L   + + GR  +A++ F++M   G+ P   T+  ++ G + S ++++A+
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAM 348

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             +  M + G+  D+V YNT++NG  +   +++A KL  EMK   ++P  I+YTT+I GY
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGY 408

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 + A+ I   M    V  + V +TAL+ G C  G++ + ++ LREMVE  + P D
Sbjct: 409 CKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +  M + G  CK G++     +LK M           Y +L+   CK      A  LL+
Sbjct: 469 ATYTMVIDGY-CKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLE 527

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNL 420
            ++   + + P         +YN +++  C N   GKAE   +   +KG ++D   + +L
Sbjct: 528 AML--NLGVTPDDI------TYNILLEGHCKN---GKAEDLLKLRNEKGLIVDYAYYTSL 576

Query: 421 IRGHSKE 427
           +  ++K 
Sbjct: 577 VSEYNKS 583



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 161/337 (47%), Gaps = 6/337 (1%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L P     N + N L  ++N +   +  + +E   ++  D  T+  +I  L + G+L+
Sbjct: 252 RGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIY-PDVFTYSVLIHGLCKEGRLD 310

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +  +M ++G++ +   F  LI+   +   +  ++  +  M  +GV+  +  Y+ L 
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLL 370

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G    A++  ++M   G++P + TY  ++ G+     LE+A+   + M   G+ 
Sbjct: 371 NGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           LD V +  +I+G+ R  ++ +AE+   EM E  ++P   +YT +I GY          ++
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
             EM+    KP  +TY  L+ GLC  G+M     +L  M+   + P D+  +  LL   C
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP-DDITYNILLEGHC 549

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           K+G    A D+LK      +  +  +Y  L+  + K+
Sbjct: 550 KNGK---AEDLLKLRNEKGLIVDYAYYTSLVSEYNKS 583



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 92/440 (20%), Positives = 172/440 (39%), Gaps = 51/440 (11%)

Query: 210 KKMDEAEKLFAE-MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS--FDVKPNA 266
           K  D A  +FA  +       +   +  ++  Y       DA++ F  +++  F +  + 
Sbjct: 131 KGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHG 190

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
             Y  LL  + ++   V +     E++E   PPK    +  L+   CK G +  A  +  
Sbjct: 191 CGY--LLDKMINSNSPVTIWTFYSEILEYGFPPKV-QYYNILINKFCKEGSIRDAKLIFN 247

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            + +  +      +  LI   CK+   D   +L   + E  I          +  +Y+ +
Sbjct: 248 EIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIY--------PDVFTYSVL 299

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC  G+   AE  F ++ ++G+  + + F  LI G  +    DSA      M   GV
Sbjct: 300 IHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGV 359

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  L+    + G+   A+  +D M   G  P    + ++++   ++G +++A  
Sbjct: 360 KPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAME 419

Query: 506 VMKSMVEKGVKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE 563
           + K M E+GV   LD VA   ++      G V +A   +  M+++G  P           
Sbjct: 420 IRKGMNEEGVV--LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP----------- 466

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
                                D A+Y  V+D     G     + +L ++   G      +
Sbjct: 467 ---------------------DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT 505

Query: 624 SDKLIAGLNQEGNTKQADIL 643
            + L+ GL ++G  K A++L
Sbjct: 506 YNVLMNGLCKQGQMKNANML 525



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 107/272 (39%), Gaps = 36/272 (13%)

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIM 440
           YN +I   C  G    A++ F ++ K+G L P  V+FN LI G  K  N D  F + K M
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRG-LRPTTVSFNTLINGLCKSRNLDEGFRLKKTM 284

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
               +  D   Y  LI    ++G    A+   D M + G  P    F ++++  +   R+
Sbjct: 285 EENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRM 344

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
            +A      M+  GVK +L +   +L  L   G V +A   +D M   G  P        
Sbjct: 345 DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKP-------- 396

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
                                   D  +Y  ++D     G   +A  I   + E+G V D
Sbjct: 397 ------------------------DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 621 WKSSDKLIAGLNQEGNTKQAD-ILSRMIRGEM 651
             +   LI+G  ++G  + A+  L  M+   M
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGM 464


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 231/524 (44%), Gaps = 30/524 (5%)

Query: 56  RETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGK-------KGIVQ 108
           + T+  +I+ L ++ +L  A+ +L++M   GV  D   + +LI+   K       KG+V 
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           E       M   G+      YD    ++ + G    AK  F+ M++ G+ P    Y  ++
Sbjct: 337 E-------MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G+     +        +MK R I +   TY T++ G      +D A  +  EM      
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P V+ YTT+IK ++   R  DA+R+  EMK   + P+   Y +L+ GL  A +M E +  
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI-PTEAGHYGILIENF 347
           L EMVE  + P +   +   +    ++    +A   +K M    + P +    G LI  +
Sbjct: 510 LVEMVENGLKP-NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG-LINEY 567

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           CK E    A      +V++ I+         +A +Y  ++  L  N +   AE  FR++ 
Sbjct: 568 CKKEKVIEACSAYRSMVDQGIL--------GDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 408 KKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
            KG+  D  ++  LI G SK GN   A  I   M   G+  +   Y  L+  + R GE  
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
            AK  LD M   G  P +  + ++++   + G +  A R+   M  KG+  +  +   ++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 527 EALLMRGHVEEAL---GRIDLMMQSGSVPNFDSLLSVLSEKGKT 567
           +       VE A+   G       S + P F++L++ + + GKT
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAP-FNALINWVFKFGKT 782



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 212/455 (46%), Gaps = 18/455 (3%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L +  +++ AR  L++M + G++ +   +   I  Y +      + K    M++ GV  +
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
                 L     ++ + + A   +  M+ +GI     TY V++ G F + K++ A   F 
Sbjct: 557 KVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+ +GI+ DV +Y  +ING+++   M +A  +F EM E+ + P VI Y  ++ G+    
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             + A  + DEM    + PNAVTY  ++ G C +G + E  ++  EM  + + P D+ V+
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVY 735

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL--IENFCKAEMYDRAI-KLLDK 362
             L+   C+   +  A  +     +    + A    ++  +  F K E+    + +L+D 
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLI 421
             ++    +P         +YN MI +LC  G    A+  F Q+    ++  V  + +L+
Sbjct: 796 SFDR--FGKPNDV------TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM-----I 476
            G+ K G     F +       G+  D   Y  +I ++L++G    A   +D M     +
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +DG   + S  R+++    + G ++ A +VM++MV
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 145/683 (21%), Positives = 294/683 (43%), Gaps = 59/683 (8%)

Query: 15  RALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + LVP ++ ++++ + L   K  E A      ++  G+ + D  T+  +I+ L +    +
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV-SLDNHTYSLLIDGLLKGRNAD 329

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A+ ++ +M   G+     M++  I    K+G+++++  +FD M   G+    ++Y +L 
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           +   R            +M    I  + +TY  ++ G   S  L+ A    ++M + G  
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            +VV Y T+I  + +  +  +A ++  EMKE+ I P +  Y ++I G    +R D+A   
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK------------- 300
             EM    +KPNA TY A + G  +A +     K ++EM E  + P              
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569

Query: 301 ---------------------DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
                                D   +  L+    K+  ++ A ++ + M    I  +   
Sbjct: 570 KEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           YG+LI  F K     +A  + D++VE+   L P   +      YN ++   C +G+  KA
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVII------YNMLLGGFCRSGEIEKA 681

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           +    ++  KG+  + V +  +I G+ K G+   AF +   M  +G+  D+  Y  L++ 
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV--- 515
             R  +   A T   +  + G + +++ F +++  +F+ G+ +  + V+  +++      
Sbjct: 742 CCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800

Query: 516 -KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAV 571
            K N      +++ L   G++E A      M  +  +P    + SLL+   + G+     
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW-----KSSDK 626
            + D  +      D   Y  +++A L  G T  A  ++ ++  K  V D       +   
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920

Query: 627 LIAGLNQEGNTKQAD-ILSRMIR 648
           L++G  + G  + A+ ++  M+R
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVR 943



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 132/614 (21%), Positives = 252/614 (41%), Gaps = 75/614 (12%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D  +F +L + Y  KG ++E+V +F     L +   +     L   +LR  R  +    +
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 150 NKMLSEGIEPTRHTYNVMLWGFF---------------------LSLKLETAIRFFEDMK 188
             M+   +     TY++++                          +L ++ A++  E M 
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +G+     TY+ +I+G  + K++++A+ L  EM    +     +Y+ +I G +    AD
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 249 -----------------------------------DALRIFDEMKSFDVKPNAVTYTALL 273
                                               A  +FD M +  + P A  Y +L+
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 274 PGLCDAGKMVEVQKVLREMVER--YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
            G C    + +  ++L EM +R   I P      +K +   C SG L+ A +++K MI  
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM---CSSGDLDGAYNIVKEMIAS 446

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
                   Y  LI+ F +   +  A+++L ++ E+ I   P      +   YN +I  L 
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI--AP------DIFCYNSLIIGLS 498

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPVAFN--NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              +  +A  F  ++++ G L P AF     I G+ +     SA + VK M   GV  + 
Sbjct: 499 KAKRMDEARSFLVEMVENG-LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
                LI  Y +K +  +A +A  SM++ G    +  +  +M  LF++ +V  A  + + 
Sbjct: 558 VLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M  KG+  ++     ++      G++++A    D M++ G  PN   ++ LL      G+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A +LLD    +    +  +Y  ++D    +G    A+ +  ++  KG V D      
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737

Query: 627 LIAGLNQEGNTKQA 640
           L+ G  +  + ++A
Sbjct: 738 LVDGCCRLNDVERA 751



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 145/315 (46%), Gaps = 18/315 (5%)

Query: 25  LVYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           ++YN+L G    +   E A +    +   GL + +  T+  +I+   + G L  A  +  
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGL-HPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  KG+  D  ++  L++   +   V+ ++ IF   K+ G   S   ++AL   + + G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFG 780

Query: 141 RYMMAKRYFNKMLSEGIE----PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
           +  +     N+++    +    P   TYN+M+        LE A   F  M++  +   V
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           +TY +++NGY++  +  E   +F E     IEP  I Y+ +I  ++       AL + D+
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900

Query: 257 MKSFD-----VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLG 310
           M + +      K +  T  ALL G    G+M   +KV+  MV  +YIP  D++  ++L+ 
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP--DSATVIELIN 958

Query: 311 VQCKSGHLNAAADVL 325
             C S +    AD +
Sbjct: 959 ESCISSNQRVEADAV 973



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 115/547 (21%), Positives = 207/547 (37%), Gaps = 84/547 (15%)

Query: 191 GISLDVVTYNTMINGYN-----------------------------------RFKKMDEA 215
           G S D V +  + +GY                                    R+ ++D  
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYV---------------------AVERADDALRIF 254
             ++  M E+N+   V +Y  +I  +                      A    D AL++ 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           + M    + P   TY  L+ GLC   ++ + + +L EM +      DN  +  L+    K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM-DSLGVSLDNHTYSLLIDGLLK 324

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
             + +AA  ++  M+   I  +   Y   I    K  + ++A  L D ++   +I  PQ 
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI--PQ- 381

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSA 433
                A +Y  +I+  C      +      ++ K+  V+ P  +  +++G    G+ D A
Sbjct: 382 -----AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           + IVK M   G   +   Y  LI+++L+     DA   L  M E G +P    + S++  
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L +  R+  A   +  MVE G+K N       +   +       A   +  M + G +PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
                 L++   +K K I A       + +  + D  +Y  +++ L    K  +A  I  
Sbjct: 557 KVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD---------------ILSRMIRGEMSRGS 655
           ++  KG   D  S   LI G ++ GN ++A                I+  M+ G   R  
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676

Query: 656 QKEKKQK 662
           + EK ++
Sbjct: 677 EIEKAKE 683



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 102/513 (19%), Positives = 194/513 (37%), Gaps = 87/513 (16%)

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIK-------GYVAVERADDALRIF------DEMKS 259
           D + ++   +K++N   T++S    I+         +  +R DD  ++       D  K 
Sbjct: 33  DASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKV 92

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-----------------YIPPKDN 302
            + K ++ ++ AL   LC+ G   +   V+  M+ER                 ++   D+
Sbjct: 93  TEQKLDSFSFLAL--DLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDD 150

Query: 303 SVFMKLL---------------------GVQ-------CKS--------GHLNAAADVLK 326
            V   +L                     G++       CK           L+   DV K
Sbjct: 151 GVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYK 210

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLDMEAS-- 381
            M+  ++  +   Y +LI   C+A        +L K  EKE     L     L ++ S  
Sbjct: 211 GMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK-TEKEFRTATLNVDGALKLKESMI 269

Query: 382 ---------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
                    +Y+ +I  LC   +   A+    ++   GV LD   ++ LI G  K  N D
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           +A  +V  M   G+      Y C I    ++G    AK   D MI  G  P +  + S++
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           E    +  V+    ++  M ++ +  +      +++ +   G ++ A   +  M+ SG  
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           PN   + +L+    +  +   A+++L     +    D+  Y  ++  L  A +   A S 
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           L +++E G   +  +    I+G  +      AD
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 149/585 (25%), Positives = 261/585 (44%), Gaps = 45/585 (7%)

Query: 1   MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           +AE+A++  L   +  ++ + + +     L  A   E A    R +   G F  D  T+ 
Sbjct: 431 LAEKAYSEMLAAGV--VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG-FIPDTSTYS 487

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           K++  L    K+  A  +  +M + G+  D   + ++++S+ K G+++++ K F+ M+++
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G   +V +Y AL    L+  +   A   F  MLSEG  P   TY+ ++ G   + ++E A
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            + FE M       DV  Y         FK+ D+  +           P V++Y  ++ G
Sbjct: 608 CQIFERMCGSKDVPDVDMY---------FKQYDDNSE----------RPNVVTYGALLDG 648

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +    R ++A ++ D M     +PN + Y AL+ GLC  GK+ E Q+V  EM E   P  
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
             + +  L+    K    + A+ VL  M+  S       Y  +I+  CK    D A KL+
Sbjct: 709 LYT-YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK---KGVL-DPVA 416
             + EK    +P         +Y  MI      G  GK E     L +   KGV  + V 
Sbjct: 768 QMMEEKGC--QPN------VVTYTAMIDGF---GMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  LI    K G  D A  +++ M +   P     Y  +IE +    E  ++   LD + 
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIG 874

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV--EKGVKENLDLVAKILEALLMRGH 534
           +D  +P  S++R ++++L +  R++ A R+++ +      + +       ++E+L +   
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934

Query: 535 VEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDF 576
           VE A      M + G +P   +F SL+  L    K   A+ LLDF
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDF 979



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 131/560 (23%), Positives = 251/560 (44%), Gaps = 35/560 (6%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K +  M   GV  +  +  +  + +   G+Y  A     +M+ +G  P   TY+ +L   
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + K+E A   FE+MK  G+  DV TY  M++ + +   +++A K F EM+E    P V
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++YT +I  Y+  ++   A  +F+ M S    PN VTY+AL+ G C AG++ +  ++   
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613

Query: 292 M--------VERYIPPKDNS-------VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           M        V+ Y    D++        +  LL   CKS  +  A  +L AM        
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI-QHLCHNGQ 395
              Y  LI+  CK    D A ++  ++ E        +TL     +Y+ +I ++     Q
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF----PATL----YTYSSLIDRYFKVKRQ 725

Query: 396 TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
              +++  + L      + V +  +I G  K G  D A++++++M  +G   +   Y  +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+ +   G+       L+ M   G +P    +R +++   ++G +  A  +++ M +   
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             +     K++E         E+LG +D + Q  + P    +  L+  L +  +   A++
Sbjct: 846 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903

Query: 573 LL-DFCLGRDCIIDLAS-YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           LL +       ++D +S Y  ++++L  A K   A+ +  ++ +KG + + +S   LI G
Sbjct: 904 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963

Query: 631 LNQEGNTKQA----DILSRM 646
           L +     +A    D +S M
Sbjct: 964 LFRNSKISEALLLLDFISHM 983



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 131/698 (18%), Positives = 262/698 (37%), Gaps = 74/698 (10%)

Query: 11  QNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           Q  +R    +   +LV  VL         + FF W  R   + H    +  +++++ R  
Sbjct: 120 QKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDD 179

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
                   L  +     +   +   VL+  + + G    +++    +K      S  +Y+
Sbjct: 180 DEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 239

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L +  L+  R   A     +M    +     T     +      K   A+   E   + 
Sbjct: 240 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TE 296

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
               D V Y  +I+G       +EA      M+  +  P V++Y+T++ G +  ++    
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
            R+ + M      P+   + +L+   C +G      K+L++MV+    P    V+  L+G
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP-GYVVYNILIG 415

Query: 311 VQC------KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
             C          L+ A      M+   +     +        C A  Y++A  ++ +++
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRG 423
            +  I  P      + S+Y+ ++ +LC+  +   A + F ++ + G V D   +  ++  
Sbjct: 476 GQGFI--P------DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K G  + A +    M   G   +   Y  LI +YL+  + + A    ++M+ +G  P 
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMV----------------EKGVKENLDLVAKILE 527
              + ++++   + G+V+ A ++ + M                 +   + N+     +L+
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK------------------ 566
                  VEEA   +D M   G  PN   +D+L+  L + GK                  
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707

Query: 567 ---TIA--------------AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
              T +              A K+L   L   C  ++  Y +++D L   GKT  AY ++
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
             + EKG   +  +   +I G    G  +   ++L RM
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 135/308 (43%), Gaps = 3/308 (0%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +VGKL+ A+ +  +M + G       +  LI+ Y K      + K+   M +  
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +V  Y  +   + + G+   A +    M  +G +P   TY  M+ GF +  K+ET +
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              E M S+G++ + VTY  +I+   +   +D A  L  EMK+ +       Y  +I+G+
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +   ++L + DE+   D  P    Y  L+  L  A ++    ++L E+        D
Sbjct: 860 --NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917

Query: 302 -NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
            +S +  L+   C +  +  A  +   M +  +  E   +  LI+   +      A+ LL
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977

Query: 361 DKLVEKEI 368
           D +   EI
Sbjct: 978 DFISHMEI 985



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 35/240 (14%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           + +MI+ L +VGK + A  ++  M +KG Q +   +  +I+ +G  G ++  +++ + M 
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRY----------------------FNKMLSEG 156
             GV  +  +Y  L     + G   +A                         FNK   E 
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES 866

Query: 157 I-----------EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL--DVVTYNTMI 203
           +            P    Y +++     + +LE A+R  E++ +   +L     TYN++I
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLI 926

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
                  K++ A +LF+EM +K + P + S+ ++IKG     +  +AL + D +   +++
Sbjct: 927 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986


>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 942

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/540 (22%), Positives = 239/540 (44%), Gaps = 50/540 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M++  GR G ++ AR     M  +G+     ++  LI +Y     ++E++     MK+ G
Sbjct: 316 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEG 375

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNK------------------------------ 151
           +E S+ +Y  +     + G    A  +F++                              
Sbjct: 376 IEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 435

Query: 152 -----MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                M  EGI+     Y+ M+ G+ +    +  +  F+ +K  G +  VVTY  +IN Y
Sbjct: 436 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLY 495

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +  K+ +A ++   MKE+ ++  + +Y+ MI G+V ++   +A  +F++M    +KP+ 
Sbjct: 496 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 555

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
           + Y  ++   C  G M    + ++EM + R+ P      FM ++    KSG +  + +V 
Sbjct: 556 ILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRP--TTRTFMPIINGFAKSGDMRRSLEVF 613

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             M R         +  LI    +    ++A+++LD++          + +     +Y  
Sbjct: 614 DMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMT--------LAGVSANEHTYTK 665

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++Q     G TGKA  +F +L  +G+ +D   +  L++   K G   SA  + K M  R 
Sbjct: 666 IMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 725

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +PR++  Y  LI+ + R+G+  +A   +  M ++G  P    + S + +  + G +  A+
Sbjct: 726 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 785

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
           + ++ M   GVK N+     +++        E+AL   + M   G  P+   +  LL+ L
Sbjct: 786 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSL 845



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 120/543 (22%), Positives = 232/543 (42%), Gaps = 24/543 (4%)

Query: 25  LVYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + Y+V+ G    A N+E A  +F   +R      +   + K+I    +   +  A  ++ 
Sbjct: 381 VTYSVIVGGFSKAGNAEAADHWFDEAKRIHK-TLNASIYGKIIYAHCQTCNMERAEALVR 439

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M ++G+     ++  +++ Y      ++ + +F  +K+ G   +V +Y  L  L  + G
Sbjct: 440 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVG 499

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   A      M  EG++    TY++M+ GF        A   FEDM   G+  DV+ YN
Sbjct: 500 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 559

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I  +     MD A +   EM++    PT  ++  +I G+        +L +FD M+  
Sbjct: 560 NIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRC 619

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P   T+ AL+ GL +  +M +  ++L EM    +   +++ + K++      G    
Sbjct: 620 GCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHT-YTKIMQGYASVGDTGK 678

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A +    +    +  +   Y  L++  CK+     A+ +  ++  + I   P+++     
Sbjct: 679 AFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI---PRNSF---- 731

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
             YN +I      G   +A    +Q+ K+GV  D   + + I   SK G+ + A + ++ 
Sbjct: 732 -VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 790

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M   GV  +   Y  LI+ + R   P  A +  + M   G  P  +++  ++ SL     
Sbjct: 791 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRAS 850

Query: 500 VQTA---SRVM---KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +  A   S VM   K MVE G+  ++         L     +E + G +   +Q    P+
Sbjct: 851 IAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSRCLC---KIEGSGGELTETLQKTFPPD 907

Query: 554 FDS 556
           + S
Sbjct: 908 WSS 910



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/487 (20%), Positives = 201/487 (41%), Gaps = 13/487 (2%)

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
           +P+R  + +M+  +     +  A   FE M++RGI+     Y ++I+ Y   + M+EA  
Sbjct: 307 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALS 366

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
              +MKE+ IE ++++Y+ ++ G+     A+ A   FDE K      NA  Y  ++   C
Sbjct: 367 CVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHC 426

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
               M   + ++REM E  I          + G           AD  K +I      E 
Sbjct: 427 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDG-------YTMVADEKKGLIVFKRLKEC 479

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
           G    ++   C   +Y +  K + K +E   +++ +  +     +Y+ MI          
Sbjct: 480 GFTPTVVTYGCLINLYTKVGK-ISKALEVSRVMKEEG-VKHNLKTYSMMINGFVKLKDWA 537

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
            A   F  ++K+G+  D + +NN+I      GN D A + VK M +         ++ +I
Sbjct: 538 NAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 597

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
             + + G+   +    D M   G  P    F +++  L E  +++ A  ++  M   GV 
Sbjct: 598 NGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVS 657

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKL 573
            N     KI++     G   +A      +   G    +  +++LL    + G+  +A+ +
Sbjct: 658 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAV 717

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                 R+   +   Y  ++D     G    A  ++ ++ ++G   D  +    I+  ++
Sbjct: 718 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 777

Query: 634 EGNTKQA 640
            G+  +A
Sbjct: 778 AGDMNRA 784



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 92/421 (21%), Positives = 177/421 (42%), Gaps = 13/421 (3%)

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           EK  +P+   +  M+K Y        A   F+ M++  + P +  YT+L+        M 
Sbjct: 303 EKINKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDME 362

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E    +R+M E  I       +  ++G   K+G+  AA        R+     A  YG +
Sbjct: 363 EALSCVRKMKEEGI-EMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKI 421

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I   C+    +RA  L+ ++ E+ I        D   + Y+ M+          K  I F
Sbjct: 422 IYAHCQTCNMERAEALVREMEEEGI--------DAPIAIYHTMMDGYTMVADEKKGLIVF 473

Query: 404 RQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           ++L + G     V +  LI  ++K G    A E+ ++M   GV  +   Y  +I  +++ 
Sbjct: 474 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 533

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
            + A+A    + M+++G  P   L+ +++ +    G +  A + +K M +   +      
Sbjct: 534 KDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 593

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLG 579
             I+      G +  +L   D+M + G VP    F++L++ L EK +   AV++LD    
Sbjct: 594 MPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTL 653

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
                +  +Y K++    + G T  A+    ++  +G   D  + + L+    + G  + 
Sbjct: 654 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQS 713

Query: 640 A 640
           A
Sbjct: 714 A 714


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/533 (23%), Positives = 248/533 (46%), Gaps = 16/533 (3%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M+  G   ++ +Y+ +     ++GRY  A    ++M S+GIE    TYN+++     + +
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
                   + M+ R I+ +  TYNT+ING  + +K+  A ++F EM   N+ P  ++Y  
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G+      + ALR+ D M++  ++P+ V Y ALL GL    K  ++ K L E +   
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKF-DIAKSLMERIRMS 179

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
                   +  ++   CK G L+ +  +L  M +     +   + +LI  FCKA     A
Sbjct: 180 GMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNA 239

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
            +++ K+ +    L P   +      Y  +I + C  G   +A   +  + + G  +D  
Sbjct: 240 KEVICKMFKAG--LAPNYVI------YATLIYNSCKKGDITEAFRNYATMTRTGHDVDYF 291

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
             N LI    + G    A + ++ M    +  ++  + C+I  Y   G+   A +  D M
Sbjct: 292 ICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEM 351

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           I+ GH P+   + S+++ L + G ++ A +++  +       + ++   IL     RG +
Sbjct: 352 IKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKL 411

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII-DLASYEK 591
            +A+     M+Q   +P+   +  +L+ LS KGK + A+   +  L R  +  +   Y  
Sbjct: 412 SDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTS 471

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGLNQEGNTKQADIL 643
           + D L   G++ NA S +++ ME  G+  D  + + ++ G ++ G  ++ + L
Sbjct: 472 LFDGLFKVGQS-NAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKL 523



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 136/631 (21%), Positives = 268/631 (42%), Gaps = 31/631 (4%)

Query: 25  LVYNVL----HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN+L        N E AL+    +E  GL   D   +  ++  L ++ K + A+ ++ 
Sbjct: 116 VTYNILIDGHCDCGNFEQALRLLDVMEAKGL-RPDEVNYGALLSGLSKLAKFDIAKSLME 174

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            +   G+      +  +I+   K G++ ES+++ D+M + G    + ++  L     + G
Sbjct: 175 RIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAG 234

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +   AK    KM   G+ P    Y  +++       +  A R +  M   G  +D    N
Sbjct: 235 KIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICN 294

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+   R  ++ EAE     M   ++ P  I++  +I GY  +  A  A  +FDEM   
Sbjct: 295 VLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKL 354

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK-DNSVFMKLLGVQCKSGHLN 319
              P+  TY +LL GLC  G + E +K+L ++   +IP   D +++  +L   CK G L+
Sbjct: 355 GHCPSHFTYGSLLKGLCKGGNLREAKKLLYKL--HHIPAAVDTNIYNTILSETCKRGKLS 412

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  +   M++ ++  ++  Y I++    +      A+   +K + +        TL   
Sbjct: 413 DAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALAR-------GTLSPN 465

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              Y  +   L   GQ+  A   + ++  KG+  D +A N ++ G+S+ G  +   ++  
Sbjct: 466 KVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFI 525

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M    +      Y  L+  Y +K +        + M   G SP      S++  L + G
Sbjct: 526 KMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSG 585

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE-----EALGRIDLMMQSGSVPN 553
            +    +++K M+ +       LV ++   +L+    E     +A   +++    G +P+
Sbjct: 586 MLDVGFKMLKKMIMEDT-----LVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPD 640

Query: 554 FDSLLSVLSEKGKTIAAVK---LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
            ++  ++ +   +  A  +   LL   L R        Y  +++ +   G    A+  L 
Sbjct: 641 VNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFR-LK 699

Query: 611 KIMEKGGVTDWKSSDK-LIAGLNQEGNTKQA 640
             ME  GV+ W  ++  ++ GL Q G  ++A
Sbjct: 700 DEMEAIGVSSWDVAESAMVRGLAQCGKVEEA 730



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 112/509 (22%), Positives = 219/509 (43%), Gaps = 51/509 (10%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  KG++ D   + +LI+   K     +   +   M++  +  +  +Y+ L   +++  +
Sbjct: 36  MESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERK 95

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A R FN+ML   + P R TYN+++ G       E A+R  + M+++G+  D V Y  
Sbjct: 96  IGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGA 155

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G ++  K D A+ L   ++   +     +YT MI G       D++L++ D M    
Sbjct: 156 LLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDG 215

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
             P+ +T++ L+ G C AGK+   ++V+ +M +  + P +  ++  L+   CK G +  A
Sbjct: 216 ASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAP-NYVIYATLIYNSCKKGDITEA 274

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
                 M R     +     +LI + C+A           ++ E E  +R  ST+D+  +
Sbjct: 275 FRNYATMTRTGHDVDYFICNVLISSLCRA----------GRVAEAEDFMRHMSTIDLAPN 324

Query: 382 S-------------------------------------YNPMIQHLCHNGQTGKAEIFFR 404
           S                                     Y  +++ LC  G   +A+    
Sbjct: 325 SITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLY 384

Query: 405 QLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +L      +D   +N ++    K G    A  +   M +  V  D+  Y  ++    RKG
Sbjct: 385 KLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKG 444

Query: 464 EPADAKTALDSMIEDGH-SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           +   A    +  +  G  SP   ++ S+ + LF+ G+   AS + + M  KG+  +   +
Sbjct: 445 KMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAI 504

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSV 551
             +L+     G +E+ + ++ + MQSGS+
Sbjct: 505 NAVLDGYSRMGKMEK-VEKLFIKMQSGSL 532



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 253/599 (42%), Gaps = 53/599 (8%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK--MIEILGRVGKLNHARCILLD 81
            L+YN       +E A + +  + R G   HD +  +   +I  L R G++  A   +  
Sbjct: 260 TLIYNSCKKGDITE-AFRNYATMTRTG---HDVDYFICNVLISSLCRAGRVAEAEDFMRH 315

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M    +  +   F+ +I  YG  G   ++  +FD M +LG   S  +Y +L K + + G 
Sbjct: 316 MSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGN 375

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              AK+   K+         + YN +L       KL  A+  F +M    +  D  TY  
Sbjct: 376 LREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAI 435

Query: 202 MINGYNRFKKMDEAEKLFAE-MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++ G +R  KM  A   F + +    + P  + YT++  G   V +++ A  I++EM+  
Sbjct: 436 ILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHK 495

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+ +   A+L G    GKM +V+K+  +M    + P   +  + L G   K   L  
Sbjct: 496 GINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYS-KKKDLLK 554

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
            +     M R+ I  +      +I   CK+ M D   K+L K++ ++ ++  Q TL+M  
Sbjct: 555 CSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLV-DQLTLNM-- 611

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
                +I + C   + GK                                  AF+++ I 
Sbjct: 612 -----LITNSCETDKMGK----------------------------------AFDLLNIK 632

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  D + Y  +     R     ++   L  M+E G +P S+ + S++  +   G +
Sbjct: 633 NLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDI 692

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSL 557
           Q A R+   M   GV       + ++  L   G VEEA+  +D M+Q   +P    F +L
Sbjct: 693 QGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTL 752

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           + +L +K K   A+KL          +D+ +Y  ++  L A G  L A+++  ++ E+G
Sbjct: 753 MHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERG 811



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/485 (22%), Positives = 220/485 (45%), Gaps = 12/485 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +++ L + G L  A+ +L  +       D +++  ++    K+G + ++V +F  M
Sbjct: 362 TYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEM 421

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLK 176
            Q  V     +Y  +   + R+G+ + A  +F K L+ G + P +  Y  +  G F   +
Sbjct: 422 VQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQ 481

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A   +E+M+ +GI+ D +  N +++GY+R  KM++ EKLF +M+  ++ P++ +Y  
Sbjct: 482 SNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNI 541

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++ GY   +      + ++ M    + P+ +T  +++ GLC +G +    K+L++M+   
Sbjct: 542 LLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMED 601

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
                 ++ M L+   C++  +  A D+L     L I  +   Y  +     +A     +
Sbjct: 602 TLVDQLTLNM-LITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRES 660

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD-PV 415
             LL  ++E+ I   P ST       Y  +I  +C  G    A     ++   GV    V
Sbjct: 661 HLLLHDMLERGIT--PTST------QYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDV 712

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           A + ++RG ++ G  + A  ++  M ++ +      +  L+    +K + ++A      M
Sbjct: 713 AESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKM 772

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR-GH 534
              G       +  ++  L  DG    A  + + M E+G+  N      +++A+    G 
Sbjct: 773 ALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGE 832

Query: 535 VEEAL 539
           VEE L
Sbjct: 833 VEERL 837



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 198/472 (41%), Gaps = 15/472 (3%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M+  G    +VTYNT++N   +  +   A  L   M+ K IE  V +Y  +I       R
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
           +     +  +M+   + PN  TY  L+ GL    K+    +V  EM+   + P +   + 
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSP-NRVTYN 119

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+   C  G+   A  +L  M    +  +  +YG L+    K   +D A  L++++   
Sbjct: 120 ILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERI--- 176

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHS 425
                  S + +   +Y  MI  LC +G   ++      + K G   D + F+ LI G  
Sbjct: 177 -----RMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFC 231

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           K G   +A E++  M + G+  +   Y  LI +  +KG+  +A     +M   GH     
Sbjct: 232 KAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYF 291

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
           +   ++ SL   GRV  A   M+ M    +  N      I+    + G   +A    D M
Sbjct: 292 ICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEM 351

Query: 546 MQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           ++ G  P+   + SLL  L + G    A KLL         +D   Y  +L      GK 
Sbjct: 352 IKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKL 411

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL--SRMIRGEMS 652
            +A ++  ++++   + D  +   ++AGL+++G    A +     + RG +S
Sbjct: 412 SDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLS 463



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 133/282 (47%), Gaps = 5/282 (1%)

Query: 26  VYNVL-HGAKNSEHALQ---FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            YN+L HG    +  L+   F+  + R G+ + D+ T   +I  L + G L+    +L  
Sbjct: 538 TYNILLHGYSKKKDLLKCSKFYNIMTRMGI-SPDKLTCHSIILGLCKSGMLDVGFKMLKK 596

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  +    D+    +LI +  +   + ++  + +I   LG+   V +Y+A+F  + R   
Sbjct: 597 MIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASA 656

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              +    + ML  GI PT   Y  ++ G      ++ A R  ++M++ G+S   V  + 
Sbjct: 657 LRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESA 716

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           M+ G  +  K++EA  +   M +K + PTV ++TT++       +  +AL++  +M  + 
Sbjct: 717 MVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYG 776

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
           VK + V Y  L+ GLC  G  +    +  EM ER + P   +
Sbjct: 777 VKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTT 818


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/544 (24%), Positives = 238/544 (43%), Gaps = 33/544 (6%)

Query: 18  VPQFDHNLVYNVLHGAKNSEHALQFFRWVERA-GLFNHDRETHLKMIEILGRVGKLNHAR 76
           V  ++ NLV      +   + A+  F  ++R       D  T+  ++    +  +L  AR
Sbjct: 110 VNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEAR 169

Query: 77  CILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
            +L +  KKG     ++  + VLI+ Y K G V E + + + M++ G++  V  Y +L  
Sbjct: 170 -VLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLIS 228

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
                G     +  F++ML   + P   TY+ ++ G   + +   A    +DM +RG+  
Sbjct: 229 AFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRP 288

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           DVV Y  + +G  +  +  +A K+   M +K  EP  ++Y  ++ G    +R DDA  + 
Sbjct: 289 DVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVV 348

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV-ERYIPPKDNSVFMKLLGVQC 313
           + M     KP+AVTY  LL GLC AGK+ E   + + ++ E++    D      L+   C
Sbjct: 349 EMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLC 408

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK------- 366
           K G ++ AA +  +M+ + +      Y  LIE +  A     A+KL    VE        
Sbjct: 409 KEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSM 468

Query: 367 --EIILRPQSTLDMEASS------------------YNPMIQHLCHNGQTGKAEIFFRQL 406
              +++     + M + +                  YN ++  LC      +A   F+++
Sbjct: 469 TYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM 528

Query: 407 MK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
                 +D V+FN +I G  K G+  SA E++  M    +  DA  +  LI  + + G  
Sbjct: 529 RNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGML 588

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            +A    + M+  GH P   +F S+++     G  +    ++  M +K V  +  L + I
Sbjct: 589 DEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTI 648

Query: 526 LEAL 529
           L  L
Sbjct: 649 LACL 652



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 243/524 (46%), Gaps = 26/524 (4%)

Query: 137 LRRGR-YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           LR+ R Y      ++KM+S  + P   + + +   F  +     A      M  RG  ++
Sbjct: 52  LRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVN 111

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEK--NIEPTVISYTTMIKGYVAVERADDALRI 253
           V   N ++ G+ R  + D+A  LF++MK     + P  ++Y T++ G+   +R  +A  +
Sbjct: 112 VYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVL 171

Query: 254 FDEM-KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           F+ M K  D +PN VTY+ L+   C +G++ E   +L EM ER     D  V+  L+   
Sbjct: 172 FEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM-EREGLKADVFVYSSLISAF 230

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           C  G +    ++   M+R  +      Y  L++   +   +  A ++L  +  + +  RP
Sbjct: 231 CGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGV--RP 288

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNP 430
                 +  +Y  +   LC NG+ G A      +++KG  +P  + +N ++ G  KE   
Sbjct: 289 ------DVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGE-EPGTLTYNVVVNGLCKEDRM 341

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF--R 488
           D AF +V++M ++G   DA  Y  L++     G+  +A      ++ +       +F   
Sbjct: 342 DDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCN 401

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           ++++ L ++GRV  A+R+  SMVE G++ N+     ++E  L    + EAL      ++S
Sbjct: 402 NLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461

Query: 549 GSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII--DLASYEKVLDALLAAGKTL 603
           G  PN   +  +++ L  K + ++  + L FC  +D  I   +  Y  ++ +L       
Sbjct: 462 GFSPNSMTYSVMINGLC-KMQMLSVARGL-FCKMKDSGIRPTVIDYNALMTSLCREDSLE 519

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
            A S+  ++       D  S + +I G  + G+ K A ++LS M
Sbjct: 520 QARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEM 563



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/406 (20%), Positives = 165/406 (40%), Gaps = 43/406 (10%)

Query: 249 DALRIFDEMKSFD--VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
           DA+ +F      D    P+    + L+  L  A +   V  V  +MV   + P+  S+  
Sbjct: 23  DAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSL-S 81

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L      + H + A  VL  M +        +  ++++ FC++   D+A+ L  ++   
Sbjct: 82  ALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN 141

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGH 424
              + P      +  +YN ++   C   +  +A + F  + K G   P  V ++ LI  +
Sbjct: 142 YDCVVP------DCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCY 195

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K G       +++ M R G+  D   Y  LI ++  +G+    +   D M+    SP  
Sbjct: 196 CKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNV 255

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             +  +M+ L   GR + AS ++K M  +GV+   D+VA                     
Sbjct: 256 VTYSCLMQGLGRTGRWREASEMLKDMTARGVRP--DVVA--------------------- 292

Query: 545 MMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
                    +  L   L + G+   A+K+LD  + +       +Y  V++ L    +  +
Sbjct: 293 ---------YTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDD 343

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           A+ ++  +++KG   D  + + L+ GL   G   +A  L +++  E
Sbjct: 344 AFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE 389


>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
          Length = 950

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 136/621 (21%), Positives = 267/621 (42%), Gaps = 65/621 (10%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M++  GR G ++ AR     M  +G+     ++  LI +Y     + E++     MK+ G
Sbjct: 313 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 372

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNK------------------------------ 151
           +E S+ +Y  +     + G    A  +F++                              
Sbjct: 373 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 432

Query: 152 -----MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                M  EGI+     Y+ M+ G+ +    +  +  F+ +K  G +  VVTY  +IN Y
Sbjct: 433 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 492

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +  K+ +A ++   MKE+ ++  + +Y+ MI G+V ++   +A  +F++M    +KP+ 
Sbjct: 493 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 552

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
           + Y  ++   C  G M    + ++EM + R+ P      FM ++    KSG +  + +V 
Sbjct: 553 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP--TTRTFMPIIHGYAKSGDMRRSLEVF 610

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             M R         +  LI    +    ++A+++LD++          + +     +Y  
Sbjct: 611 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT--------LAGVSANEHTYTK 662

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++Q     G TGKA  +F +L  +G+ +D   +  L++   K G   SA  + K M  R 
Sbjct: 663 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 722

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +PR++  Y  LI+ + R+G+  +A   +  M ++G  P    + S + +  + G +  A+
Sbjct: 723 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 782

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
           + ++ M   GVK N+     +++        E+AL   + M   G  P+   +  LL+ L
Sbjct: 783 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 842

Query: 562 SEKGKTIAAV---KLLDFC---LGRDCIIDLAS---YEKVLDALLAAGKTLNAYSILFKI 612
             +     A     ++  C   +    I+D+ +   + K L  + A+G  L       + 
Sbjct: 843 LSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELT------ET 896

Query: 613 MEKGGVTDWKSSDKLIAGLNQ 633
           ++K    DW S       L+Q
Sbjct: 897 LQKTFPPDWSSHHHHHGFLDQ 917



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/547 (22%), Positives = 233/547 (42%), Gaps = 32/547 (5%)

Query: 25  LVYNVLHGA-KNSEHALQFFRWVERAGLFNH--DRETHLKMIEILGRVGKLNHARCILLD 81
           + Y+V+ G    + HA     W + A   +   +   + K+I    +   +  A  ++ +
Sbjct: 378 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVRE 437

Query: 82  MPKKGVQWDEDMFEVLIESYG-----KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
           M ++G+     ++  +++ Y      KKG+V     +F  +K+ G   +V +Y  L  L 
Sbjct: 438 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLV-----VFKRLKECGFTPTVVTYGCLINLY 492

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            + G+   A      M  EG++    TY++M+ GF        A   FEDM   G+  DV
Sbjct: 493 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 552

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + YN +I+ +     MD A +   EM++    PT  ++  +I GY        +L +FD 
Sbjct: 553 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 612

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M+     P   T+  L+ GL +  +M +  ++L EM    +   +++ + K++      G
Sbjct: 613 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT-YTKIMQGYASVG 671

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
               A +    +    +  +   Y  L++  CK+     A+ +  ++  + I   P+++ 
Sbjct: 672 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI---PRNSF 728

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                 YN +I      G   +A    +Q+ K+GV  D   + + I   SK G+ + A +
Sbjct: 729 -----VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ 783

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
            ++ M   GV  +   Y  LI+ + R   P  A +  + M   G  P  +++  ++ SL 
Sbjct: 784 TIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLL 843

Query: 496 EDGRVQTA---SRVM---KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
               +  A   S VM   K MVE G+  ++       + L     +E + G +   +Q  
Sbjct: 844 SRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLC---KIEASGGELTETLQKT 900

Query: 550 SVPNFDS 556
             P++ S
Sbjct: 901 FPPDWSS 907



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/487 (21%), Positives = 200/487 (41%), Gaps = 13/487 (2%)

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
           +P+R  + +M+  +     +  A   FE M++RGI+     Y ++I+ Y   + MDEA  
Sbjct: 304 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 363

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
              +MKE+ IE ++++Y+ ++ G+     A+ A   FDE K      NA  Y  ++   C
Sbjct: 364 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 423

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
               M   + ++REM E  I          + G           AD  K ++      E 
Sbjct: 424 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDG-------YTMVADEKKGLVVFKRLKEC 476

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
           G    ++   C   +Y +  K + K +E   +++ +  +     +Y+ MI          
Sbjct: 477 GFTPTVVTYGCLINLYTKVGK-ISKALEVSRVMKEEG-VKHNLKTYSMMINGFVKLKDWA 534

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
            A   F  ++K+G+  D + +NN+I      GN D A + VK M +         ++ +I
Sbjct: 535 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 594

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
             Y + G+   +    D M   G  P    F  ++  L E  +++ A  ++  M   GV 
Sbjct: 595 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 654

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKL 573
            N     KI++     G   +A      +   G    +  +++LL    + G+  +A+ +
Sbjct: 655 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 714

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                 R+   +   Y  ++D     G    A  ++ ++ ++G   D  +    I+  ++
Sbjct: 715 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 774

Query: 634 EGNTKQA 640
            G+  +A
Sbjct: 775 AGDMNRA 781



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/421 (21%), Positives = 176/421 (41%), Gaps = 13/421 (3%)

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           EK  +P+   +  M+K Y        A   F+ M++  + P +  YT+L+        M 
Sbjct: 300 EKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMD 359

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E    +R+M E  I       +  ++G   K+GH  AA        R+     A  YG +
Sbjct: 360 EALSCVRKMKEEGI-EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 418

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I   C+    +RA  L+ ++ E+ I        D   + Y+ M+          K  + F
Sbjct: 419 IYAHCQTCNMERAEALVREMEEEGI--------DAPIAIYHTMMDGYTMVADEKKGLVVF 470

Query: 404 RQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           ++L + G     V +  LI  ++K G    A E+ ++M   GV  +   Y  +I  +++ 
Sbjct: 471 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 530

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
            + A+A    + M+++G  P   L+ +++ +    G +  A + +K M +   +      
Sbjct: 531 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 590

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLG 579
             I+      G +  +L   D+M + G VP    F+ L++ L EK +   AV++LD    
Sbjct: 591 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 650

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
                +  +Y K++    + G T  A+    ++  +G   D  + + L+    + G  + 
Sbjct: 651 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 710

Query: 640 A 640
           A
Sbjct: 711 A 711


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 204/447 (45%), Gaps = 10/447 (2%)

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
            E++ +F  M       S+  +  L  +I +  R+ +    F +M   GI P  +T N++
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           +     S +   A  F   M   G   D+VT+ ++++G+  + ++++A  LF ++     
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P V++YTT+I         + A+ IF++M    ++PN VTY +L+ GLC+ G+  +   
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +LR+M++R I P +   F  L+    K G +  A ++ K MI++S+  +   Y  LI   
Sbjct: 244 LLRDMMKRGIQP-NVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           C    Y R    LD+  +   ++        E + Y  +I   C + +       F ++ 
Sbjct: 303 CT---YGR----LDEARQMFYLMESNGYYPNEVT-YTTLIHGFCKSKRVEDGTKIFYEMS 354

Query: 408 KKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
           +KG V + + +  LI+G+   G PD A E+   MG R  P D   Y  L++     G   
Sbjct: 355 QKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVE 414

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
            A      M +         +  +++ + + G+V+ A  +  S+  KG+K N+     ++
Sbjct: 415 KALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMI 474

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN 553
                RG + EA      M + G +PN
Sbjct: 475 SGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 189/404 (46%), Gaps = 29/404 (7%)

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           + +F+ M+ LG+   + + + +   + R  +   A  +  KM+  G EP   T+  +L G
Sbjct: 102 ISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHG 161

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           F    ++E A+  F+ +   G   +VVTY T+I+   + + ++ A ++F +M +  I P 
Sbjct: 162 FCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPN 221

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V++Y +++ G   + R  DA  +  +M    ++PN +T+TAL+      GK++E +++ +
Sbjct: 222 VVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYK 281

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            M++  + P D   +  L+   C  G L+ A  +   M           Y  LI  FCK+
Sbjct: 282 VMIQMSVYP-DVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKS 340

Query: 351 EMYDRAIKLLDKLVEKEIIL----------------RP---QSTLDMEAS--------SY 383
           +  +   K+  ++ +K ++                 RP   Q   +   S        +Y
Sbjct: 341 KRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTY 400

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N ++  LC+NG   KA + F+ + K+ + ++ V +  +I+G  K G  + AF++   +  
Sbjct: 401 NVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFS 460

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           +G+  +   Y  +I  + R+G   +A      M EDG  P  S+
Sbjct: 461 KGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 171/371 (46%), Gaps = 10/371 (2%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A C L  M K G + D   F  L+  +     +++++ +FD +  +G   +V +Y  L  
Sbjct: 136 ASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIH 195

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + +      A   FN+M   GI P   TYN ++ G     +   A     DM  RGI  
Sbjct: 196 CLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQP 255

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           +V+T+  +I+ + +  K+ EA++L+  M + ++ P V +YT +I G     R D+A ++F
Sbjct: 256 NVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMF 315

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
             M+S    PN VTYT L+ G C + ++ +  K+  EM ++ +   +   +  L+   C 
Sbjct: 316 YLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL-VANTITYTVLIQGYCL 374

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G  + A +V   M     P +   Y +L++  C     ++A+ +   + ++E       
Sbjct: 375 VGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKRE------- 427

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
            +D+   +Y  +IQ +C  G+   A   F  L  KG+  + + +  +I G  + G    A
Sbjct: 428 -MDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEA 486

Query: 434 FEIVKIMGRRG 444
             + K M   G
Sbjct: 487 DALFKKMKEDG 497



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 163/343 (47%), Gaps = 9/343 (2%)

Query: 28  NVLHGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           ++LHG       E AL  F  +   G F  +  T+  +I  L +   LNHA  I   M  
Sbjct: 157 SLLHGFCHWNRIEDALALFDQIVGMG-FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGD 215

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            G++ +   +  L+    + G   ++  +   M + G++ +V ++ AL    ++ G+ M 
Sbjct: 216 NGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIME 275

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           AK  +  M+   + P   TY  ++ G     +L+ A + F  M+S G   + VTY T+I+
Sbjct: 276 AKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIH 335

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G+ + K++++  K+F EM +K +    I+YT +I+GY  V R D A  +F++M S    P
Sbjct: 336 GFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPP 395

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ--CKSGHLNAAA 322
           +  TY  LL GLC  G + +   + + M +R +   D ++    + +Q  CK G +  A 
Sbjct: 396 DIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM---DINIVTYTIIIQGMCKVGKVEDAF 452

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
           D+  ++    +      Y  +I  FC+      A  L  K+ E
Sbjct: 453 DLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKE 495



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/437 (20%), Positives = 184/437 (42%), Gaps = 13/437 (2%)

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           + +EA  LF  M      P+++ +T ++     ++R D  + +F++M+   + P   T  
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            ++  +C + +       L +M++    P D   F  LL   C    +  A  +   ++ 
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEP-DLVTFTSLLHGFCHWNRIEDALALFDQIVG 180

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
           +        Y  LI   CK    + A+++ +++ +  I  RP         +YN ++  L
Sbjct: 181 MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGI--RPN------VVTYNSLVSGL 232

Query: 391 CHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C  G+   A    R +MK+G+  + + F  LI    K G    A E+ K+M +  V  D 
Sbjct: 233 CEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDV 292

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  LI      G   +A+     M  +G+ P    + +++    +  RV+  +++   
Sbjct: 293 FTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYE 352

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M +KG+  N      +++   + G  + A    + M    + P+   ++ LL  L   G 
Sbjct: 353 MSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGY 412

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A+ +  +   R+  I++ +Y  ++  +   GK  +A+ +   +  KG   +  +   
Sbjct: 413 VEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTT 472

Query: 627 LIAGLNQEGNTKQADIL 643
           +I+G  + G   +AD L
Sbjct: 473 MISGFCRRGFIHEADAL 489



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 107/211 (50%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L   G+L+ AR +   M   G   +E  +  LI  + K   V++  KIF
Sbjct: 291 DVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIF 350

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M Q G+  +  +Y  L +     GR  +A+  FN+M S    P   TYNV+L G   +
Sbjct: 351 YEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYN 410

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A+  F+ M+ R + +++VTY  +I G  +  K+++A  LF  +  K ++P VI+Y
Sbjct: 411 GYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITY 470

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
           TTMI G+       +A  +F +MK     PN
Sbjct: 471 TTMISGFCRRGFIHEADALFKKMKEDGFLPN 501


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 231/496 (46%), Gaps = 16/496 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  ++ S  K    + ++     M+  G++  + +++ L        +   A     K+L
Sbjct: 56  FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKIL 115

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G +P   T N +L G  L+ K++ A+ F + +  +   LD V+Y T+ING  +  +  
Sbjct: 116 KLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETR 175

Query: 214 EAEKLFAEMKE-KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            A +L  +++    + P VI YT +I  +   +   DA  ++ EM    + PN VT+ +L
Sbjct: 176 AALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSL 235

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G++ E   +L EM    + P +   F  L+   CK G +  A  VL  MI+  
Sbjct: 236 IYGFCIVGQLKEAVGLLNEMSLNNVNP-NVYTFNILIDGLCKEGEVKKATSVLSVMIKQG 294

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  L++ +   +  ++A     K V   I LR  +       SY+ MI  LC 
Sbjct: 295 VEPNVVTYTSLMDGYFLVKEVNKA-----KHVFNTISLRGVTP---NVHSYSVMINGLCK 346

Query: 393 NGQTGKAEIFFRQL-MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           N    +A   F+++ +K    + V +++LI G  K G     ++++  +  RG P +   
Sbjct: 347 NKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIIT 406

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  L+    +  +   A   L  M ++G  P  S + ++++ L ++GR++ A R+ + ++
Sbjct: 407 YNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLL 466

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
            KG   N+ +   ++  L   G  +EAL  +  M  +G +P+   +++L+S L +  K  
Sbjct: 467 CKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNG 526

Query: 569 AAVKLLDFCLGR--DC 582
            AVKLL   + R  DC
Sbjct: 527 KAVKLLREMIARESDC 542



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 188/395 (47%), Gaps = 9/395 (2%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           R  + Q  +  + N L  +  +  ALQ  R +E   L   D   +  +I+   +   +  
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVID 212

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  +  +M  K +  +   F  LI  +   G ++E+V + + M    V  +V +++ L  
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + + G    A    + M+ +G+EP   TY  ++ G+FL  ++  A   F  +  RG++ 
Sbjct: 273 GLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTP 332

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           +V +Y+ MING  + K +DEA KLF EM  KN+ P  ++Y+++I G     R  D   + 
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLI 392

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           DE+ +     N +TY +LL GLC   ++ +   +L +M +  I P D S +  L+   CK
Sbjct: 393 DEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQP-DMSTYTTLVDGLCK 451

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           +G L  A  + + ++    P     Y ++I   CK   +D A+ LL ++ +   +  P  
Sbjct: 452 NGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCM--P-- 507

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
               +A +Y  +I  L  N + GKA    R+++ +
Sbjct: 508 ----DAVTYETLISALFKNNKNGKAVKLLREMIAR 538


>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g04810, chloroplastic; AltName: Full=Maize PPR4
           homolog; Short=AtPPR4; Flags: Precursor
 gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
 gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 952

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 136/621 (21%), Positives = 267/621 (42%), Gaps = 65/621 (10%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M++  GR G ++ AR     M  +G+     ++  LI +Y     + E++     MK+ G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNK------------------------------ 151
           +E S+ +Y  +     + G    A  +F++                              
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434

Query: 152 -----MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                M  EGI+     Y+ M+ G+ +    +  +  F+ +K  G +  VVTY  +IN Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +  K+ +A ++   MKE+ ++  + +Y+ MI G+V ++   +A  +F++M    +KP+ 
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
           + Y  ++   C  G M    + ++EM + R+ P      FM ++    KSG +  + +V 
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP--TTRTFMPIIHGYAKSGDMRRSLEVF 612

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             M R         +  LI    +    ++A+++LD++          + +     +Y  
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT--------LAGVSANEHTYTK 664

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++Q     G TGKA  +F +L  +G+ +D   +  L++   K G   SA  + K M  R 
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +PR++  Y  LI+ + R+G+  +A   +  M ++G  P    + S + +  + G +  A+
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
           + ++ M   GVK N+     +++        E+AL   + M   G  P+   +  LL+ L
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844

Query: 562 SEKGKTIAAV---KLLDFC---LGRDCIIDLAS---YEKVLDALLAAGKTLNAYSILFKI 612
             +     A     ++  C   +    I+D+ +   + K L  + A+G  L       + 
Sbjct: 845 LSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELT------ET 898

Query: 613 MEKGGVTDWKSSDKLIAGLNQ 633
           ++K    DW S       L+Q
Sbjct: 899 LQKTFPPDWSSHHHHHGFLDQ 919



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/547 (22%), Positives = 233/547 (42%), Gaps = 32/547 (5%)

Query: 25  LVYNVLHGA-KNSEHALQFFRWVERAGLFNH--DRETHLKMIEILGRVGKLNHARCILLD 81
           + Y+V+ G    + HA     W + A   +   +   + K+I    +   +  A  ++ +
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVRE 439

Query: 82  MPKKGVQWDEDMFEVLIESYG-----KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
           M ++G+     ++  +++ Y      KKG+V     +F  +K+ G   +V +Y  L  L 
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLV-----VFKRLKECGFTPTVVTYGCLINLY 494

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            + G+   A      M  EG++    TY++M+ GF        A   FEDM   G+  DV
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + YN +I+ +     MD A +   EM++    PT  ++  +I GY        +L +FD 
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M+     P   T+  L+ GL +  +M +  ++L EM    +   +++ + K++      G
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT-YTKIMQGYASVG 673

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
               A +    +    +  +   Y  L++  CK+     A+ +  ++  + I   P+++ 
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI---PRNSF 730

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                 YN +I      G   +A    +Q+ K+GV  D   + + I   SK G+ + A +
Sbjct: 731 -----VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ 785

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
            ++ M   GV  +   Y  LI+ + R   P  A +  + M   G  P  +++  ++ SL 
Sbjct: 786 TIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLL 845

Query: 496 EDGRVQTA---SRVM---KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
               +  A   S VM   K MVE G+  ++       + L     +E + G +   +Q  
Sbjct: 846 SRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLC---KIEASGGELTETLQKT 902

Query: 550 SVPNFDS 556
             P++ S
Sbjct: 903 FPPDWSS 909



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 103/487 (21%), Positives = 200/487 (41%), Gaps = 13/487 (2%)

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
           +P+R  + +M+  +     +  A   FE M++RGI+     Y ++I+ Y   + MDEA  
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
              +MKE+ IE ++++Y+ ++ G+     A+ A   FDE K      NA  Y  ++   C
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
               M   + ++REM E  I          + G           AD  K ++      E 
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDG-------YTMVADEKKGLVVFKRLKEC 478

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
           G    ++   C   +Y +  K + K +E   +++ +  +     +Y+ MI          
Sbjct: 479 GFTPTVVTYGCLINLYTKVGK-ISKALEVSRVMKEEG-VKHNLKTYSMMINGFVKLKDWA 536

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
            A   F  ++K+G+  D + +NN+I      GN D A + VK M +         ++ +I
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
             Y + G+   +    D M   G  P    F  ++  L E  +++ A  ++  M   GV 
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKL 573
            N     KI++     G   +A      +   G    +  +++LL    + G+  +A+ +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                 R+   +   Y  ++D     G    A  ++ ++ ++G   D  +    I+  ++
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776

Query: 634 EGNTKQA 640
            G+  +A
Sbjct: 777 AGDMNRA 783



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/421 (21%), Positives = 176/421 (41%), Gaps = 13/421 (3%)

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           EK  +P+   +  M+K Y        A   F+ M++  + P +  YT+L+        M 
Sbjct: 302 EKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMD 361

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E    +R+M E  I       +  ++G   K+GH  AA        R+     A  YG +
Sbjct: 362 EALSCVRKMKEEGI-EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I   C+    +RA  L+ ++ E+ I        D   + Y+ M+          K  + F
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGI--------DAPIAIYHTMMDGYTMVADEKKGLVVF 472

Query: 404 RQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           ++L + G     V +  LI  ++K G    A E+ ++M   GV  +   Y  +I  +++ 
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
            + A+A    + M+++G  P   L+ +++ +    G +  A + +K M +   +      
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLG 579
             I+      G +  +L   D+M + G VP    F+ L++ L EK +   AV++LD    
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
                +  +Y K++    + G T  A+    ++  +G   D  + + L+    + G  + 
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712

Query: 640 A 640
           A
Sbjct: 713 A 713


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 184/359 (51%), Gaps = 17/359 (4%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L +VG+   A  +L  +  K VQ +  M+  +I+S  K  +V E+  ++  M   G
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +   V +Y AL       G+   A   FNKM+ E I+P  +T+N+++ GF    K++   
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F  M  +GI  +VVTY ++++GY   K++++A  +F  M +  + P   SY  MI G+
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             +++ D+A+ +F +M   ++ PN VTYT+L+ GLC +GK+    K++ EM +R +PP D
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPP-D 387

Query: 302 NSVFMKLLGVQCKSGHLNAAA--------DVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
              +  +L   CK+  ++ A          V + +       +   Y ++I+ FC   ++
Sbjct: 388 IITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLF 447

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           + A+ LL K+ +   I  P      +A +Y  +I  L    +   AE   R+++ +G+L
Sbjct: 448 NEALALLSKMEDNGRI--P------DAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 214/484 (44%), Gaps = 49/484 (10%)

Query: 9   RLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           RL ++     P F+   +   L        A+   R +E  G+ ++    ++ +I    +
Sbjct: 49  RLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNI-LINCFSQ 107

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIE------SYG-------KKGIVQESVKIFD 115
           +G+   +  +  ++ KKG   +      LI+      SYG       K G  + ++++  
Sbjct: 108 LGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLR 167

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
            +    V+ +V  Y+ +   + +      A   +++M+SEGI P   TY+ ++ GFF+  
Sbjct: 168 RVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVG 227

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           KL+ AI  F  M    I  DV T+N +++G+ +  KM E + +FA M ++ I+P V++Y 
Sbjct: 228 KLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 287

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           +++ GY  V++ + A  IF+ M    V P+  +Y  ++ G C   K+ E   + ++M  +
Sbjct: 288 SLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCK 347

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            I P +   +  L+   CKSG ++ A  ++  M    +P +   Y  +++  CK    D+
Sbjct: 348 NIIP-NVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDK 406

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           AI LL K       L+ Q   D+    YN                           LD  
Sbjct: 407 AIALLTK-------LKDQVFEDLFVKGYN---------------------------LDVY 432

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           A+  +I+G   +G  + A  ++  M   G   DA  Y  +I S  +K E   A+  L  M
Sbjct: 433 AYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492

Query: 476 IEDG 479
           I  G
Sbjct: 493 IARG 496



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 220/522 (42%), Gaps = 63/522 (12%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHAL--QFFRWVERAGLFNHDRETHLKMIE---ILGRV 69
           + L   F      N +   KN EH L   F R +       H +     + E   ILG +
Sbjct: 18  QTLNSSFQQIYTLNYITIIKNDEHNLVSSFNRLL-------HQKNPTPPIFEFGKILGSL 70

Query: 70  GKLN---HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
            K+N    A  +   M  KG+  +     +LI  + + G    S  +F  + + G + +V
Sbjct: 71  VKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNV 130

Query: 127 -------------KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
                         SY  L   + + G+   A +   ++  + ++P    YN ++     
Sbjct: 131 ITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCK 190

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
              +  A   + +M S GIS DVVTY+ +I+G+    K+ +A  LF +M  +NI+P V +
Sbjct: 191 VKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYT 250

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           +  ++ G+    +  +   +F  M    +KPN VTY +L+ G C   ++ +   +   M 
Sbjct: 251 FNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMA 310

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +  + P   S  + + G  CK   ++ A ++ K M   +I      Y  LI+  CK+   
Sbjct: 311 QGGVNPDTQSYNIMINGF-CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKI 369

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
             A+KL+D++ ++ +   P   +     +Y+ ++  LC N Q  KA     +L       
Sbjct: 370 SYALKLVDEMHDRGV---PPDII-----TYSSILDALCKNHQVDKAIALLTKL------- 414

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
                            D  FE + +   +G   D  AY  +I+ +  KG   +A   L 
Sbjct: 415 ----------------KDQVFEDLFV---KGYNLDVYAYTVMIQGFCVKGLFNEALALLS 455

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            M ++G  P +  +  ++ SLF+      A ++++ M+ +G+
Sbjct: 456 KMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/490 (20%), Positives = 200/490 (40%), Gaps = 83/490 (16%)

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            TAI     M+ +GI+ ++VT N +IN +++  +   +  +FA + +K  +P VI+ TT+
Sbjct: 77  HTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTL 136

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           IKG                          V+Y  L+ GLC  G+     ++LR +  + +
Sbjct: 137 IKGLCL----------------------KVSYGTLINGLCKVGQARAALQLLRRVDGKLV 174

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +  ++  ++   CK   +N A D+   M+   I  +   Y  LI  F        AI
Sbjct: 175 QP-NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
            L +K++ + I  +P                                        D   F
Sbjct: 234 DLFNKMILENI--KP----------------------------------------DVYTF 251

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N L+ G  K+G       +  +M ++G+  +   Y  L++ Y    +   A +  ++M +
Sbjct: 252 NILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQ 311

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G +P +  +  ++    +  +V  A  + K M  K +  N+     +++ L   G +  
Sbjct: 312 GGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISY 371

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD----------FCLGRDCII 584
           AL  +D M   G  P+   + S+L  L +  +   A+ LL           F  G +  +
Sbjct: 372 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYN--L 429

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
           D+ +Y  ++      G    A ++L K+ + G + D K+ + +I  L ++    + D+  
Sbjct: 430 DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKK---DENDMAE 486

Query: 645 RMIRGEMSRG 654
           +++R  ++RG
Sbjct: 487 KLLREMIARG 496


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/552 (22%), Positives = 246/552 (44%), Gaps = 27/552 (4%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           + ++L RVG   +   +  D+ ++G Q  +  F  +I  + +KG +     +  +M +  
Sbjct: 27  LFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFH 86

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E +  +Y+ +      RGR   A  +FN M+  G  PT  T+N ++  F     +  A 
Sbjct: 87  CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEAR 146

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F+ +K  G S + + YNT++NGY + +++D+A  L+ EM++K I P  I++  ++ G+
Sbjct: 147 KLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 206

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R +D  R+  ++    + P+   +   + GLC AG++ E  + L +M+E+ + P  
Sbjct: 207 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 266

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + F  ++    ++G  + A +  K M+   +         L+           A +L+ 
Sbjct: 267 IA-FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIG 325

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           +++EK         L +   ++  ++      G    A+  + ++ ++G+  D VAF+  
Sbjct: 326 QMIEK--------GLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAF 377

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G SK+G  + A+ +   M R+G+  +  AY  LI  + + G+  +A      M   G 
Sbjct: 378 IDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGL 437

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P       ++  L + GR+++A  V   M + G+  ++     ++        +  A  
Sbjct: 438 LPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADN 497

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRD-----CIIDLASYEKVLDA 595
            ++ M  SGS P+             T   +++  FC  R       ++D      +L  
Sbjct: 498 LVNRMYASGSNPDL------------TTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSF 545

Query: 596 LLAAGKTLNAYS 607
             A   TLNA++
Sbjct: 546 SFACPPTLNAHT 557



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/547 (22%), Positives = 246/547 (44%), Gaps = 48/547 (8%)

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           ++++I   M+++GV  S      LFKL+LR G Y    + F  ++  G +P ++T++ ++
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 169 WGF-----------FLSL------------------------KLETAIRFFEDMKSRGIS 193
            GF            L L                        +   A+ +F  M  RG +
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
             VVT+NT+IN + +   + EA KLF  +KE    P  I Y T++ GYV +   D A  +
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           ++EM+   + P+ +T+  L+ G    G+  +  ++L+++    + P D S+F   +   C
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLP-DRSLFDISVSGLC 242

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
            +G L+ A + L  M+   +      +  +I  + +A + D+A +    +V   +   P 
Sbjct: 243 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP- 301

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDS 432
                  S+ + ++  L  NG+  +A     Q+++KG+ ++ +AF  L+    K G+   
Sbjct: 302 -------STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVG 354

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  +   M RRG+  D  A+   I+   ++G   +A      M+  G  P +  + S++ 
Sbjct: 355 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLIC 414

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
              + G++  A ++ K M  +G+  ++     I+  L  +G +  A+     M Q+G  P
Sbjct: 415 GFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP 474

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +   +++L++   +    + A  L++         DL +Y   +    ++ +   A  +L
Sbjct: 475 DIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLML 534

Query: 610 FKIMEKG 616
            +++  G
Sbjct: 535 DELVSAG 541



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 186/439 (42%), Gaps = 13/439 (2%)

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A ++   M+E  + P+      + K  + V    +  ++F ++     +P   T++ ++
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  G +   + +L  M + +  P +   +  ++   C  G  + A      MI    
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEP-NAFAYNIVINACCIRGRTSDALAWFNLMIERGC 122

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 +  +I  FCK      A KL D L  KE+   P + +      YN ++      
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGL--KEMGFSPNAIM------YNTLMNGYVKM 174

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A + + ++ KKG+  D + FN L+ GH K G  +    ++K +   G+  D   +
Sbjct: 175 REIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLF 234

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
              +      G   +A   L  M+E G SP+   F SV+ +  + G    A    K MV 
Sbjct: 235 DISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVH 294

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG-SVPN--FDSLLSVLSEKGKTIA 569
            G+  +    + +L  L + G ++EA   I  M++ G SV N  F  LL    ++G  + 
Sbjct: 295 FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVG 354

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A  L      R    D+ ++   +D L   G    AY++  +++ KG + +  + + LI 
Sbjct: 355 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLIC 414

Query: 630 GLNQEGNTKQADILSRMIR 648
           G  + G   +A  L +++R
Sbjct: 415 GFCKCGKLNEALKLEKVMR 433


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 220/468 (47%), Gaps = 10/468 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R GK + A  +  +M   GV  +   +  +I+ + K G ++   ++ D M   G
Sbjct: 22  VIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 81

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + ++ +Y+ L   + R GR    +   ++M S  + P   TY+++  G   + +  T +
Sbjct: 82  PKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTML 141

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F +   +G+ L   T + ++NG  +  K+ +AE++   +    + PT + Y T+I GY
Sbjct: 142 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGY 201

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             V     A  IF++MKS  ++P+ +TY AL+ GLC    + + + ++ EM +  + P  
Sbjct: 202 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 261

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + F  L+     +G L     VL  M +  I ++   +G +++ FCK      A+ +LD
Sbjct: 262 ET-FNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 320

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
            ++ K++    Q         YN +I     +G T +A +   ++   GV    V +N L
Sbjct: 321 DMIYKDVAPNAQ--------VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           ++G  +    D A E++  +  +G+  D  +Y  +I +   KG+   A   L  M + G 
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 432

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
            P    + +++ +L   GRV     + + M+ K V+ +  +   +++A
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 480



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 222/468 (47%), Gaps = 16/468 (3%)

Query: 154 SEGIEPT-RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
           SEG  P    +YNV++ G + S K   A++ F++M   G+  + +TYNTMI+G+ +   +
Sbjct: 8   SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 67

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           +   +L  +M     +P +++Y  ++ G     R D+   + DEM S  + P+  TY+ L
Sbjct: 68  EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 127

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
             GL   G+   +  +  E +++ +     +  + L G+ CK G +  A  VL+ ++   
Sbjct: 128 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGL-CKDGKVAKAEQVLEMLVHTG 186

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  LI  +C+      A  + +++  + I  RP         +YN +I  LC 
Sbjct: 187 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI--RPDHI------TYNALINGLCK 238

Query: 393 NGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
                KAE    ++ K GV DP    FN LI  +   G  +  F ++  M ++G+  D  
Sbjct: 239 LEMVTKAEDLVMEMEKSGV-DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 297

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           ++  +++++ + G+  +A   LD MI    +P + ++ S++++  E G  + A  +++ M
Sbjct: 298 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
              GV  ++     +L+ L     ++EA   I  +   G  P+   +++++S    KG T
Sbjct: 358 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 417

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
             A++LL           L +Y  ++ AL +AG+  +   +  +++ K
Sbjct: 418 DKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 465



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 190/405 (46%), Gaps = 10/405 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++  L R G+++  R ++ +M    +  D   + +L +   + G  +  + +F   
Sbjct: 88  TYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 147

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + GV     +   L   + + G+   A++    ++  G+ PT   YN ++ G+     L
Sbjct: 148 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 207

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A   FE MKSR I  D +TYN +ING  + + + +AE L  EM++  ++P+V ++ T+
Sbjct: 208 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 267

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I  Y    + +    +  +M+   +K + +++ +++   C  GK+ E   +L +M+ + +
Sbjct: 268 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 327

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +  V+  ++    +SG    A  +++ M    +      Y +L++  C++   D A 
Sbjct: 328 AP-NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 386

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-A 416
           +L+  L  +   LRP      +  SYN +I   C+ G T KA    +++ K G+   +  
Sbjct: 387 ELIYTLRNQG--LRP------DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 438

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           ++ L+   +  G       + + M  + V   +  Y  ++++Y+R
Sbjct: 439 YHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 483



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 128/248 (51%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L ++  +  A  ++++M K GV    + F  LI++YG  G +++   + 
Sbjct: 225 DHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 284

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+Q G++  V S+ ++ K   + G+   A    + M+ + + P    YN ++  +  S
Sbjct: 285 SDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES 344

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              E A    E MK+ G+S  +VTYN ++ G  R  ++DEAE+L   ++ + + P V+SY
Sbjct: 345 GDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSY 404

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I         D AL +  EM  + ++P   TY  L+  L  AG++ +++ + ++M+ 
Sbjct: 405 NTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLH 464

Query: 295 RYIPPKDN 302
           + + P  +
Sbjct: 465 KNVEPSSS 472



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 177/423 (41%), Gaps = 42/423 (9%)

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P   SY  +I G     +  DAL++FDEM    V PN +TY  ++ G    G + E    
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL-EAGFR 72

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           LR+ +    P  +   +  LL   C++G ++    ++  M   S+  +   Y IL +   
Sbjct: 73  LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +       + L  + ++K ++L         A + + ++  LC +G+  KAE     L+ 
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLG--------AYTCSILLNGLCKDGKVAKAEQVLEMLVH 184

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G++   V +N LI G+ +  +   AF I + M  R +  D   Y  LI    +      
Sbjct: 185 TGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTK 244

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+  +  M + G  P+   F +++++    G+++    V+  M +KG+K +         
Sbjct: 245 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD--------- 295

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
                                  V +F S++    + GK   AV +LD  + +D   +  
Sbjct: 296 -----------------------VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 332

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            Y  ++DA + +G T  A+ ++ K+   G      + + L+ GL +     +A+ L   +
Sbjct: 333 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 392

Query: 648 RGE 650
           R +
Sbjct: 393 RNQ 395



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 140/293 (47%), Gaps = 2/293 (0%)

Query: 11  QNKIRALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           Q K R + P    +N + N L   +    A      +E++G+ +   ET   +I+  G  
Sbjct: 216 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV-DPSVETFNTLIDAYGTA 274

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+L     +L DM +KG++ D   F  +++++ K G + E+V I D M    V  + + Y
Sbjct: 275 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 334

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           +++    +  G    A     KM + G+  +  TYN++L G   S +++ A      +++
Sbjct: 335 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 394

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +G+  DVV+YNT+I+        D+A +L  EM +  I PT+ +Y T++    +  R  D
Sbjct: 395 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 454

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              ++ +M   +V+P++  Y  ++          +V  + +EM E+ I   D 
Sbjct: 455 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 507


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 148/624 (23%), Positives = 269/624 (43%), Gaps = 74/624 (11%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           L+ +  +++P     L +   H   N   A+  F  + R           +K  +ILG +
Sbjct: 4   LRFRFHSIIPNSTLLLSHTHFHSLPNLNDAIDSFNRMLRM----RPPPPIIKFGKILGSL 59

Query: 70  GKLNHARCIL---LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
            K  H   ++     M   G+Q +     +LI SY     +  +  +F  + +LG +  +
Sbjct: 60  VKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDI 119

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
            +Y  L + +   G+   +  + ++++S+GI+    +Y  ++ G     +   A+R    
Sbjct: 120 ITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRK 179

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           ++      DVV YNT+I+G  + K + +A  L+ EM EK + P V++YT++I G+  V +
Sbjct: 180 IEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQ 239

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            D A  + +EM   +V PN  T+  L+ GLC  GKM E + ++  M++  + P D   + 
Sbjct: 240 LDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGP-DVFTYN 298

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+           A +V   M ++ +  +   Y ++I    K +M D A+ L + +  +
Sbjct: 299 ALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNE 358

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSK 426
            +                                          + D VA+++LI G  K
Sbjct: 359 NV------------------------------------------IPDVVAYSSLIDGLCK 376

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED-GHSPASS 485
            G  +SA + V  M  RG P +   Y  LI++ L K    D   AL   I+D G      
Sbjct: 377 SGRINSALKYVDEMHDRGQPPNVITYTSLIDA-LCKSHQVDKAIALLKKIKDQGIQANMY 435

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK--ILEALLMRGHVEEALGRID 543
            +  +++ L +DGR+  A +V + ++ KG   N+D+V    ++  L      +EAL  + 
Sbjct: 436 TYNILVDGLCKDGRLTDAQKVFQDLLMKG--HNVDVVTYSIMINGLCKESLFDEALTLLS 493

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M   G VP+   ++++++   EK     A KLL     R+ +ID   Y+         G
Sbjct: 494 KMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLL-----RE-MIDCVDYKD-------NG 540

Query: 601 KTLNAYSILFKIMEKGGVTDWKSS 624
            T + Y     I ++  +  W SS
Sbjct: 541 DTCDQYDEF--ICKRSILASWNSS 562



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 4/153 (2%)

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFD 555
           ++ +A  V   +++ G + ++     ++  L + G V+E+L   D ++  G      ++ 
Sbjct: 99  QINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYG 158

Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           +L++ L + G+T  A++LL    G  C  D+  Y  ++D L       +A+ +  ++ EK
Sbjct: 159 TLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEK 218

Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
               +  +   LI G    G   +A  +L+ M+
Sbjct: 219 RVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMV 251


>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
          Length = 586

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 205/424 (48%), Gaps = 18/424 (4%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEH-ALQFFRWVER----AGLFNHDRETHLKMIE 64
           L+  + AL P     LV  VL   K++   + +FFRW       +G F H   T+ KM+ 
Sbjct: 170 LEAALTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVH 229

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           ILG+  +      ++ +M K+G     D F++ I+S+   G ++ +V +F++M+  G + 
Sbjct: 230 ILGKARQFQSMVALIQEMGKEGALC-MDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDD 288

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
            V+S++ L   + + G    A + F++M  +   P   +Y  ++  +  +  L  A R +
Sbjct: 289 GVESFNCLLVALAQEGLGREANQVFDRM-RDRYAPDLRSYTALMLAWCNARNLVEAGRVW 347

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M   G+  DVV +NTMI G  R ++  EA K+F  MK K   P V +YT +I+ +   
Sbjct: 348 NEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKR 407

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            + D A+R F+EM+    +P+  TYT LL G  +A +M  V  +L EM ++  PP D   
Sbjct: 408 GKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPP-DGRT 466

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN-FCKAEMYDRAIKLLDKL 363
           +  L+ +       + AA + K MI+  +      Y +++++ F     Y     + +++
Sbjct: 467 YNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEM 526

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIR 422
             K I          + +SY   I     +G+  +A  +  ++++KG+  P + +N    
Sbjct: 527 HRKGICP--------DVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAA 578

Query: 423 GHSK 426
             SK
Sbjct: 579 DFSK 582



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 6/235 (2%)

Query: 2   AERAWTTRLQNKIRALVPQFDHN-LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
           A R W   L+N ++  V    HN ++  +L G +  E A++ F  ++  G    +  T+ 
Sbjct: 343 AGRVWNEMLENGLKPDV--VVHNTMIEGLLRGQRRPE-AVKMFELMKAKGPAP-NVWTYT 398

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            +I    + GK++ A     +M   G Q D   +  L+  YG    +     + + M Q 
Sbjct: 399 MLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQK 458

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK-LET 179
           G     ++Y+AL KL+  R     A R + KM+ +G+EPT HTYN+M+  +FL  +    
Sbjct: 459 GCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMM 518

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
               +E+M  +GI  DV +Y   ING+ R  + +EA K   EM +K ++   I Y
Sbjct: 519 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDY 573



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 154/383 (40%), Gaps = 21/383 (5%)

Query: 182 RFFE-----DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYT 235
           RFF         S G +   +TY  M++   + ++      L  EM KE  +   + ++ 
Sbjct: 202 RFFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVALIQEMGKEGAL--CMDAFK 259

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
             IK + A     +A+ +F+ M++        ++  LL  L   G   E  +V   M +R
Sbjct: 260 IAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR 319

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
           Y P  D   +  L+   C + +L  A  V   M+   +  +   +  +IE   + +    
Sbjct: 320 YAP--DLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPE 377

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           A+K+ + +  K     P   +     +Y  +I+  C  G+   A   F ++   G    V
Sbjct: 378 AVKMFELMKAKG----PAPNV----WTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDV 429

Query: 416 A-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           A +  L+ G+      D    +++ M ++G P D   Y  LI+    +  P DA      
Sbjct: 430 ATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKK 489

Query: 475 MIEDGHSPASSLFRSVMESLFEDGR-VQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           MI+ G  P    +  +M+S F  GR       V + M  KG+  +++     +   +  G
Sbjct: 490 MIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHG 549

Query: 534 HVEEALGRIDLMMQSG-SVPNFD 555
             EEA   I+ M+Q G   P  D
Sbjct: 550 RPEEACKYIEEMIQKGMKTPQID 572



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 397 GKAEIF------FRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           GKA  F       +++ K+G L   AF   I+  +  G   +A  + ++M   G     +
Sbjct: 232 GKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVE 291

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           ++ CL+ +  ++G   +A    D M  D ++P    + ++M +      +  A RV   M
Sbjct: 292 SFNCLLVALAQEGLGREANQVFDRM-RDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEM 350

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
           +E G+K ++ +   ++E LL      EA+   +LM   G  PN   +  L+    ++GK 
Sbjct: 351 LENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKM 410

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
             A++  +      C  D+A+Y  +L     A +     ++L ++ +KG   D ++ + L
Sbjct: 411 DMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNAL 470

Query: 628 IAGL-NQEGNTKQADILSRMIR 648
           I  L N+      A I  +MI+
Sbjct: 471 IKLLTNRNMPDDAARIYKKMIK 492


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 186/407 (45%), Gaps = 10/407 (2%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  +  T+  +I  L +VG  + A  +L  M +   Q D  ++  +I+S  K   V E+ 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            +F  M   G+   + +Y +L   +     +       N+M++  I P    ++ ++   
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               K+  A    + M  RG+  DVVTY T+++G+    +MDEA K+F  M  K   P V
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ISYTT+I GY  + + D A+ +F+EM   +  P+  TY  L+ GLC  G++ +   +  E
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           MV R   P D   +  LL   CK+ HL  A  +LKA+   ++  +   Y I+I+  C+A 
Sbjct: 397 MVARGQMP-DLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 455

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             + A  L   L  K   L P         +YN MI  LC  G   +A   F ++     
Sbjct: 456 ELEAARDLFSNLSSKG--LHPS------VWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 507

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
             D   +N + RG  +      A ++++ M  RG   D      L+E
Sbjct: 508 SPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVE 554



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/538 (21%), Positives = 235/538 (43%), Gaps = 35/538 (6%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCIL---LDMPKKGVQWDEDMFEVLIESYGKKGIVQES 110
           H   + +   ++L  + K+ H   +L     M   GV  +     +LI S+     V  +
Sbjct: 51  HPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFA 110

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             +   + +LG +    ++  L + +   G+   A   F+KM+ EG +P   TY  ++ G
Sbjct: 111 FSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLING 170

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
                    AIR    M+      DVV Y ++I+   + +++ EA  LF++M  + I P 
Sbjct: 171 LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 230

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           + +YT+++     +        + ++M +  + P+ V ++ ++  LC  GK+ E  +++ 
Sbjct: 231 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 290

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            M++R + P D   +  L+   C    ++ A  V   M+R     +   Y  LI  +CK 
Sbjct: 291 MMIQRGVEP-DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 349

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
              D+A+ L +++  KE I         +  +YN ++  LCH G+   A   F +++ +G
Sbjct: 350 HKIDKAMYLFEEMCRKEWI--------PDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
            + D V ++ L+    K  + + A  ++K +    +  D   Y  +I+   R GE   A+
Sbjct: 402 QMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 461

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM--------------VEKGV 515
               ++   G  P+   +  ++  L + G +  A+++   M              + +G 
Sbjct: 462 DLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 521

Query: 516 KENLDLVAKI--LEALLMRGHVEEALGRIDLMMQSGSVPNFDS-----LLSVLSEKGK 566
            +N + +  I  LE +L RG   + +    L+++  S    D      +LSVLSE  +
Sbjct: 522 LQNNETLRAIQLLEEMLARGFSAD-VSTTTLLVEMLSDDGLDQSSCFLMLSVLSEDDR 578



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/561 (22%), Positives = 230/561 (40%), Gaps = 42/561 (7%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ S  K       + +   M   GV  +V + + L        R   A     K+L
Sbjct: 59  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 118

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G +P   T+  ++ G  +  K+  A+  F+ M   G   +VVTY T+ING  +     
Sbjct: 119 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A +L   M++ N +P V+ YT++I       +  +A  +F +M    + P+  TYT+L+
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC+  +   V  +L +MV   I P D  +F  ++   CK G +  A +++  MI+  +
Sbjct: 239 HALCNLCEWKHVTTLLNQMVNSKILP-DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 297

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y  L++  C     D A+K+ D +V K     P      +  SY  +I   C  
Sbjct: 298 EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG--FAP------DVISYTTLINGYCKI 349

Query: 394 GQTGKAEIFFRQLMKK-GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  KA   F ++ +K  + D   +N L+ G    G    A  +   M  RG   D   Y
Sbjct: 350 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L++S  +     +A   L ++     +P   ++  +++ +   G ++ A  +  ++  
Sbjct: 410 SILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
           KG+  ++     ++  L  RG + EA  ++ + M                          
Sbjct: 470 KGLHPSVWTYNIMIHGLCKRGLLNEA-NKLFMEMD------------------------- 503

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
                 G DC  D  +Y  +    L   +TL A  +L +++ +G   D  ++  L+  L+
Sbjct: 504 ------GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLS 557

Query: 633 QEGNTKQADILSRMIRGEMSR 653
            +G  + +  L   +  E  R
Sbjct: 558 DDGLDQSSCFLMLSVLSEDDR 578



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 223/501 (44%), Gaps = 16/501 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I  L   GK+  A  +   M  +G Q +   +  LI    K G    ++++ 
Sbjct: 125 DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 184

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+Q   +  V  Y ++   + +  +   A   F++M+ +GI P   TY  ++      
Sbjct: 185 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 244

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + +        M +  I  DVV ++T+++   +  K+ EA ++   M ++ +EP V++Y
Sbjct: 245 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 304

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           TT++ G+      D+A+++FD M      P+ ++YT L+ G C   K+ +   +  EM  
Sbjct: 305 TTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCR 364

Query: 295 R-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           + +IP  D   +  L+   C  G L  A  +   M+      +   Y IL+++ CK    
Sbjct: 365 KEWIP--DTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHL 422

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
           + A+ LL K +E        S L+ +   YN +I  +C  G+   A   F  L  KG+  
Sbjct: 423 EEAMALL-KAIEA-------SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHP 474

Query: 414 PV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
            V  +N +I G  K G  + A ++   M       D   Y  +   +L+  E   A   L
Sbjct: 475 SVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLL 534

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL--- 529
           + M+  G S   S    ++E L +DG  Q++  +M S++ +  +     + +  + L   
Sbjct: 535 EEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLSEDDRRYFIFIPEGFDLLGWE 594

Query: 530 LMRGHVEEALGRIDLMMQSGS 550
            MR  ++E L +I  + +SG+
Sbjct: 595 FMRCKLKE-LAKIGEVSKSGT 614



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 36/167 (21%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A+   + +E + L N D + +  +I+ + R G+L  AR +  ++  KG+      + +
Sbjct: 423 EEAMALLKAIEASNL-NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 481

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I    K+G++ E                                   A + F +M    
Sbjct: 482 MIHGLCKRGLLNE-----------------------------------ANKLFMEMDGND 506

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
             P   TYN +  GF  + +   AI+  E+M +RG S DV T   ++
Sbjct: 507 CSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLV 553


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 224/503 (44%), Gaps = 22/503 (4%)

Query: 49  AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ 108
           AG       T+  +I    R G+L+     L ++ KKG + D   F  L++         
Sbjct: 85  AGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTS 144

Query: 109 ESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE---GIEPTRHTY 164
           +++ I    M +LG    V SY+ L K +    R   A    + M  +   G  P   +Y
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 165 NVMLWGFF--------LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           N +L GFF         +  ++ A+     M   G+  D +TYN++++GY    +  EA 
Sbjct: 205 NTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 264

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
               +M+   +EP V++Y++++       R+ +A +IFD M    ++P+  TY  LL G 
Sbjct: 265 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGH 324

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  G+++E +K+   MV   + P D   +  L+   C +G ++ A  +L +M+ + +  +
Sbjct: 325 CKEGRVIESEKLFDLMVRIGVKP-DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 383

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              YG LI  +C+    D A+ L  ++V         S +     +YN ++Q L H  +T
Sbjct: 384 IVTYGTLINGYCRVSRMDDALALFKEMV--------SSGVSPNIITYNIILQGLFHTRRT 435

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A+  +  + K G  L+   +N ++ G  K    D A  + + +    +  +   +  +
Sbjct: 436 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 495

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I + L+ G   +AK    +   +G  P    +  + E+L E G ++    +  SM E G 
Sbjct: 496 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 555

Query: 516 KENLDLVAKILEALLMRGHVEEA 538
             +  ++  I+  LL RG +  A
Sbjct: 556 SADSRMLNSIVRKLLQRGDITRA 578



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 187/418 (44%), Gaps = 51/418 (12%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  M K GV  D   +  ++  Y   G  +E++     M+  GVE +V +Y +L   + 
Sbjct: 231 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC 290

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + GR   A++ F+ M   G+EP   TY  +L G     ++  + + F+ M   G+  D++
Sbjct: 291 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDII 350

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYNT+I+G     KMDEA KL A M    ++P +++Y T+I GY  V R DDAL +F EM
Sbjct: 351 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 410

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  V PN +TY  +L GL    +    +       E Y+                    
Sbjct: 411 VSSGVSPNIITYNIILQGLFHTRRTAAAK-------ELYV-------------------- 443

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                 + K+  +L + T    Y I++   CK  + D A+++   L   +        L 
Sbjct: 444 -----SITKSGTQLELST----YNIILHGLCKNNLTDEALRMFQNLCLTD--------LQ 486

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
           +E  ++N MI  L   G+  +A+  F      G++  V  ++ +     ++G+ +   ++
Sbjct: 487 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 546

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH-----SPASSLFRS 489
              M   G   D+     ++   L++G+   A T L  MI++ H     S AS L  S
Sbjct: 547 FLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL-FMIDEKHFSLEASTASFLLES 603



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 131/563 (23%), Positives = 232/563 (41%), Gaps = 37/563 (6%)

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTY 164
           +++  +FD + + G   S+   +     + R        RY N+M   G   + PT HTY
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTY 95

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA-EKLFAEMK 223
            +++     + +L+       ++  +G  +D +T+  ++ G    K+  +A + +   M 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEM---KSFDVKPNAVTYTALLPGLCDAG 280
           E    P V SY  ++KG     R+ +AL +   M   +     P+ V+Y  +L G    G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 281 --------KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
                    M +  +VL  MV+  + P D   +  +L   C SG    A   LK M    
Sbjct: 216 IQTKLTAQAMDKAMEVLNTMVKNGVMP-DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 274

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +      Y  L+   CK      A K+ D + ++         L+ + ++Y  ++Q  C 
Sbjct: 275 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR--------GLEPDIATYRTLLQGHCK 326

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+  ++E  F  +++ GV  D + +N LI G    G  D A +++  M   GV  D   
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI  Y R     DA      M+  G SP    +  +++ LF   R   A  +  S+ 
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 446

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEAL------GRIDLMMQSGSVPNFDSLLSVLSEKG 565
           + G +  L     IL  L      +EAL         DL +++ +   F+ ++  L + G
Sbjct: 447 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT---FNIMIGALLKCG 503

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSS 624
           +   A  L         + D+ +Y  + + L+  G +L     LF  ME+ G + D +  
Sbjct: 504 RMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG-SLEELDDLFLSMEENGCSADSRML 562

Query: 625 DKLIAGLNQEGNTKQADILSRMI 647
           + ++  L Q G+  +A     MI
Sbjct: 563 NSIVRKLLQRGDITRAGTYLFMI 585



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 108/267 (40%), Gaps = 40/267 (14%)

Query: 41  QFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
           + F  + R G+   D  T+  +I+     GK++ A  +L  M   GV+ D   +  LI  
Sbjct: 335 KLFDLMVRIGV-KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 393

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
           Y +   + +++ +F  M   GV  ++ +Y+ + + +    R   AK  +  +   G +  
Sbjct: 394 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 453

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA----- 215
             TYN++L G   +   + A+R F+++    + L+  T+N MI    +  +MDEA     
Sbjct: 454 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFA 513

Query: 216 ------------------------------EKLFAEMKEKNIEPTVISYTTMIKGYVA-- 243
                                         + LF  M+E           ++++  +   
Sbjct: 514 AHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 573

Query: 244 -VERADDALRIFDEMKSFDVKPNAVTY 269
            + RA   L + DE K F ++ +  ++
Sbjct: 574 DITRAGTYLFMIDE-KHFSLEASTASF 599


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/560 (22%), Positives = 251/560 (44%), Gaps = 28/560 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           + ++L RVG   +   +  D+ ++G Q  +  F  +I  + +KG +     +  +M +  
Sbjct: 237 LFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFH 296

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            E +  +Y+ +      RGR   A  +FN M+  G  PT  T+N ++  F     +  A 
Sbjct: 297 CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEAR 356

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F+ +K  G S + + YNT++NGY + +++D+A  L+ EM++K I P  I++  ++ G+
Sbjct: 357 KLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 416

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R +D  R+  ++    + P+   +   + GLC AG++ E  + L +M+E+ + P  
Sbjct: 417 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 476

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + F  ++    ++G  + A +  K M+   +         L+           A +L+ 
Sbjct: 477 IA-FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIG 535

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
           +++EK         L +   ++  ++      G    A+  + ++ ++G+  D VAF+  
Sbjct: 536 QMIEK--------GLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAF 587

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G SK+G  + A+ +   M R+G+  +  AY  LI  + + G+  +A      M   G 
Sbjct: 588 IDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGL 647

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P       ++  L + GR+++A  V   M + G+  ++     ++        +  A  
Sbjct: 648 LPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADN 707

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            ++ M  SGS P+             T   +++  FC  R     +     +LD L++AG
Sbjct: 708 LVNRMYASGSNPDL------------TTYNIRIHGFCSSR----RMNRAVLMLDELVSAG 751

Query: 601 KTLNAYSILFKIMEKGGVTD 620
              N  ++ +  M  G  +D
Sbjct: 752 IVPN--TVTYNSMLNGVCSD 769



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 137/623 (21%), Positives = 278/623 (44%), Gaps = 60/623 (9%)

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL---IESYGKKGIVQESVKIFDIMKQLG 121
           ++ R+G L      L++   +G    E  F VL   + ++    +  ++++I   M+++G
Sbjct: 169 VIARIGVLRSGD--LVEFMWRGHHVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVG 226

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF---------- 171
           V  S      LFKL+LR G Y    + F  ++  G +P ++T++ ++ GF          
Sbjct: 227 VRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGE 286

Query: 172 -FLSL------------------------KLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
             L L                        +   A+ +F  M  RG +  VVT+NT+IN +
Sbjct: 287 SLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAF 346

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +   + EA KLF  +KE    P  I Y T++ GYV +   D A  +++EM+   + P+ 
Sbjct: 347 CKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDG 406

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           +T+  L+ G    G+  +  ++L+++    + P D S+F   +   C +G L+ A + L 
Sbjct: 407 ITFNILVSGHYKYGREEDGDRLLKDISVLGLLP-DRSLFDISVSGLCWAGRLDEAMEFLM 465

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+   +      +  +I  + +A + D+A +    +V   +   P        S+ + +
Sbjct: 466 DMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP--------STCSSL 517

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           +  L  NG+  +A     Q+++KG+ ++ +AF  L+    K G+   A  +   M RRG+
Sbjct: 518 LMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGI 577

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D  A+   I+   ++G   +A      M+  G  P +  + S++    + G++  A +
Sbjct: 578 FPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALK 637

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           + K M  +G+  ++     I+  L  +G +  A+     M Q+G  P+   +++L++   
Sbjct: 638 LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 697

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           +    + A  L++         DL +Y   +    ++ +   A  +L +++  G V +  
Sbjct: 698 KAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTV 757

Query: 623 SSDKLIAGLNQEGNTKQADILSR 645
           + + ++ G+        +DIL R
Sbjct: 758 TYNSMLNGV-------CSDILDR 773


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/535 (23%), Positives = 234/535 (43%), Gaps = 91/535 (17%)

Query: 7   TTRLQNKIRALVPQFDHNLVYNVLHGAKNS---EHALQFFRWVE-----RAGLFNHDRET 58
           T  L + ++ ++P    N + ++++   +S      L FF+W+      R  + ++   T
Sbjct: 51  TKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMT 110

Query: 59  HL----KMIE--------ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI 106
           H     KM+         ++ R GK + +      +  +G      +F VL+ +Y   G 
Sbjct: 111 HFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGY 170

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
             ++++ F ++++  ++    S   LF  +++      A  ++ ++L  G  P    +NV
Sbjct: 171 FSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNV 230

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY------------NRF----- 209
           ++       K+  A   F ++  RG+   VV++NT+INGY             RF     
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290

Query: 210 ------------------KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
                              ++D+A KLF EM ++ + P  +++TT+I G+    RAD  +
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM 350

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            I+ +M    VKP+ +TY  L+ GLC  G + E +K++ EM +R + P D   +  L+  
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP-DKFTYTMLIDG 409

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK G L +A ++ K M++  I  +   +  LI  FC+      A + L +++E  I  +
Sbjct: 410 CCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI--K 467

Query: 372 PQSTL----------------------DMEAS-------SYNPMIQHLCHNGQTGKAEIF 402
           P                          +M+         +YN ++  LC  GQ   A + 
Sbjct: 468 PDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANML 527

Query: 403 FRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
              ++  GV+ D + +N L+ GH K GN +   +  K+   +G+ +D  +Y  LI
Sbjct: 528 LDAMLNLGVVPDDITYNILLEGHCKHGNRE---DFDKLQSEKGLVQDYGSYTSLI 579



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 157/391 (40%), Gaps = 57/391 (14%)

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           +Y  +   LC    + E Q +L+ +V R      +SVF  +L  +  +   N    VL  
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEAR-GTHQSNLVFSVL-- 161

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIK------LLDKLVEKEIILRP-----QSTL 376
              ++  T++G++   I+ F     ++  I       L D+L++  +   P     +  L
Sbjct: 162 ---MNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLT-SPAWAFYEEIL 217

Query: 377 DM----EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNP 430
           D     +   +N ++  LC   +  +A++ F ++ K+G L P  V+FN LI G+ K GN 
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG-LRPTVVSFNTLINGYCKSGNL 276

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D  F + + M    V  D   Y  LI    ++G+  DA      M + G  P    F ++
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           +      GR      + + M+ KGVK ++     ++  L   G + EA   +  M Q G 
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 551 VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
            P                                D  +Y  ++D     G   +A  I  
Sbjct: 397 KP--------------------------------DKFTYTMLIDGCCKEGDLESALEIRK 424

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           +++++G   D  +   LI+G  +EG   +A+
Sbjct: 425 EMVKEGIELDNVAFTALISGFCREGQVIEAE 455


>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
 gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
          Length = 646

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/572 (22%), Positives = 259/572 (45%), Gaps = 37/572 (6%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG-KLNHARCIL 79
           + +  + ++L  A+  +  +  F  ++R G    +  T+  M+++ G+ G   +  + + 
Sbjct: 75  YAYTSLISILSRARRFDEGITLFETMQREGQ-RGNAVTYNVMLDLYGKRGDSWDRIQSLF 133

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M    +  D+  +  +I +  +    QE++++F  MK+ G   +  +Y+AL  +  + 
Sbjct: 134 QEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKG 193

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G +  A     +M + GI P   TYN ++  +  +   + A    + + S+G+  D  TY
Sbjct: 194 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTY 253

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            T+I+ +NR ++ ++A + F EM++ N  P +++Y  +I  Y  +E+ DD +++F  M+ 
Sbjct: 254 CTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQE 313

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHL 318
            +  P+ VT+ +LL    + G + EV  V REM    Y+P  D   F  L+    + G++
Sbjct: 314 KNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVD--TFNILIECYGRCGYV 371

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL-- 376
           + + D+ K ++R  +      +  L+ +  +   + +  K+  ++ E  + L        
Sbjct: 372 DYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGL 431

Query: 377 ------------------DMEASSYNPMIQHLCHN--------GQTGKAEIFFRQLMKKG 410
                             ++E S+  P+   LC              +A++   QL   G
Sbjct: 432 IHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNG 491

Query: 411 -VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
              D   FN +I   +K G  + A ++++ + +  +  D   Y CL+  Y R+G    A+
Sbjct: 492 HSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAE 551

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
             +  M   G +P    + +++ S  + GR+  A+RV   MV   V+ +      ++ + 
Sbjct: 552 EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSY 611

Query: 530 LMRGHVEEALGRIDLMMQSGSVP---NFDSLL 558
              G  +EAL  I+ M + G  P    F +LL
Sbjct: 612 SSLGLYKEALSVIEYMTEHGCQPTQITFKALL 643



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 82/169 (48%)

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           N A+  L  +   G   D  +F  +I    K+G ++ +VK+ + +++  ++    +Y+ L
Sbjct: 478 NEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCL 537

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
             +  R G Y  A+   ++M   G  P   TYN +L+ +    +++ A R F DM +  +
Sbjct: 538 MSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARV 597

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             D  T+NT++  Y+      EA  +   M E   +PT I++  ++ GY
Sbjct: 598 RPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/183 (20%), Positives = 87/183 (47%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           + +  + +Y K  +  E+    + +   G    +K ++A+  +  +RG    A +   ++
Sbjct: 463 LCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEI 522

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
               ++P   TYN ++  +        A     +M+  G + +++TYNT++  Y +  +M
Sbjct: 523 RKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRM 582

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D+A ++F +M    + P   ++ T++  Y ++    +AL + + M     +P  +T+ AL
Sbjct: 583 DDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKAL 642

Query: 273 LPG 275
           L G
Sbjct: 643 LDG 645



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 2/146 (1%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI +  + G +  A  +L ++ K  ++ D   +  L+  YG++G+  ++ ++   M++ G
Sbjct: 502 MISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAG 561

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL-ETA 180
              ++ +Y+ L     + GR   A R F  M++  + P   T+N ++ G + SL L + A
Sbjct: 562 KAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLV-GSYSSLGLYKEA 620

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGY 206
           +   E M   G     +T+  +++GY
Sbjct: 621 LSVIEYMTEHGCQPTQITFKALLDGY 646



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 109/283 (38%), Gaps = 14/283 (4%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI    +A  +D  I L + +         +      A +YN M+      G +   
Sbjct: 77  YTSLISILSRARRFDEGITLFETM--------QREGQRGNAVTYNVMLDLYGKRGDSWDR 128

Query: 400 EIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
                Q MK   + P    +N +I    +  +   A  + + M   G   +   Y  L++
Sbjct: 129 IQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLD 188

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
            Y + G   +A   L  M   G SP    +  ++ +    G    A+ + KS++ KG+  
Sbjct: 189 VYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCP 248

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           +      ++ A       E+AL     M ++   PN   ++ L+ +     K    +K+ 
Sbjct: 249 DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVF 308

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
            F   ++C  DL ++  +L +    G  L   S +F+ M++ G
Sbjct: 309 KFMQEKNCTPDLVTWNSLLKSFGNCG-MLTEVSNVFREMKRAG 350



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 45  WVERA-GLFNHDRETHLK--------MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           W+ERA  L    R+  LK        ++ + GR G  + A  ++ +M + G   +   + 
Sbjct: 511 WIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYN 570

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            L+ SY K G + ++ ++F  M    V     +++ L       G Y  A      M   
Sbjct: 571 TLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEH 630

Query: 156 GIEPTRHTYNVMLWGF 171
           G +PT+ T+  +L G+
Sbjct: 631 GCQPTQITFKALLDGY 646


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 213/455 (46%), Gaps = 18/455 (3%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L +  +++ AR  L++M + G++ +   +   I  Y +      + K    M++ GV  +
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
                 L     ++G+ + A   +  M+ +GI     TY V++ G F + K++ A   F 
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+ +GI+ DV +Y  +ING+++   M +A  +F EM E+ + P VI Y  ++ G+    
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             + A  + DEM    + PNAVTY  ++ G C +G + E  ++  EM  + + P D+ V+
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVY 735

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL--IENFCKAEMYDRAI-KLLDK 362
             L+   C+   +  A  +     +    + A    ++  +  F K E+    + +L+D 
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLI 421
             ++    +P         +YN MI +LC  G    A+  F Q+    ++  V  + +L+
Sbjct: 796 SFDR--FGKPNDV------TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM-----I 476
            G+ K G     F +       G+  D   Y  +I ++L++G    A   +D M     +
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +DG   + S  R+++    + G ++ A +VM++MV
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 139/600 (23%), Positives = 248/600 (41%), Gaps = 67/600 (11%)

Query: 56  RETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGK-------KGIVQ 108
           + T+  +I+ L ++ +L  A+ +L++M   GV  D   + +LI+   K       KG+V 
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           E       M   G+      YD    ++ + G    AK  F+ M++ G+ P    Y  ++
Sbjct: 337 E-------MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G+     +        +MK R I +   TY T++ G      +D A  +  EM      
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P V+ YTT+IK ++   R  DA+R+  EMK   + P+   Y +L+ GL  A +M E +  
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L EMVE  + P                                     A  YG  I  + 
Sbjct: 510 LVEMVENGLKPN------------------------------------AFTYGAFISGYI 533

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +A  +  A K + ++ E  ++  P   L         +I   C  G+  +A   +R ++ 
Sbjct: 534 EASEFASADKYVKEMRECGVL--PNKVL------CTGLINEYCKKGKVIEACSAYRSMVD 585

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +G+L D   +  L+ G  K    D A EI + M  +G+  D  +Y  LI  + + G    
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A +  D M+E+G +P   ++  ++      G ++ A  ++  M  KG+  N      I++
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                G + EA    D M   G VP+   + +L+           A+ +      + C  
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCAS 764

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIM----EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             A +  +++ +   GKT     +L ++M    ++ G  +  + + +I  L +EGN + A
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 147/684 (21%), Positives = 295/684 (43%), Gaps = 61/684 (8%)

Query: 15  RALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + LVP ++ ++++ + L   K  E A      ++  G+ + D  T+  +I+ L +    +
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV-SLDNHTYSLLIDGLLKGRNAD 329

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A+ ++ +M   G+     M++  I    K+G+++++  +FD M   G+    ++Y +L 
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           +   R            +M    I  + +TY  ++ G   S  L+ A    ++M + G  
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            +VV Y T+I  + +  +  +A ++  EMKE+ I P +  Y ++I G    +R D+A   
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
             EM    +KPNA TY A + G  +A +     K ++EM E  + P +  +   L+   C
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP-NKVLCTGLINEYC 568

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAG----------------------------------- 338
           K G +  A    ++M+   I  +A                                    
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            YG+LI  F K     +A  + D++VE+   L P   +      YN ++   C +G+  K
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVII------YNMLLGGFCRSGEIEK 680

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A+    ++  KG+  + V +  +I G+ K G+   AF +   M  +G+  D+  Y  L++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV-- 515
              R  +   A T   +  + G + +++ F +++  +F+ G+ +  + V+  +++     
Sbjct: 741 GCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 516 --KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAA 570
             K N      +++ L   G++E A      M  +  +P    + SLL+   + G+    
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW-----KSSD 625
             + D  +      D   Y  +++A L  G T  A  ++ ++  K  V D       +  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 626 KLIAGLNQEGNTKQAD-ILSRMIR 648
            L++G  + G  + A+ ++  M+R
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVR 943



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 133/614 (21%), Positives = 253/614 (41%), Gaps = 75/614 (12%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D  +F +L + Y  KG ++E+V +F     L +   +     L   +LR  R  +    +
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 150 NKMLSEGIEPTRHTYNVMLWGFF---------------------LSLKLETAIRFFEDMK 188
             M+   +     TY++++                          +L ++ A++  E M 
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +G+     TY+ +I+G  + K++++A+ L  EM    +     +Y+ +I G +    AD
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 249 -----------------------------------DALRIFDEMKSFDVKPNAVTYTALL 273
                                               A  +FD M +  + P A  Y +L+
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 274 PGLCDAGKMVEVQKVLREMVER--YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
            G C    + +  ++L EM +R   I P      +K +   C SG L+ A +++K MI  
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM---CSSGDLDGAYNIVKEMIAS 446

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
                   Y  LI+ F +   +  A+++L ++ E+ I   P      +   YN +I  L 
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI--AP------DIFCYNSLIIGLS 498

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPVAFN--NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              +  +A  F  ++++ G L P AF     I G+ +     SA + VK M   GV  + 
Sbjct: 499 KAKRMDEARSFLVEMVENG-LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
                LI  Y +KG+  +A +A  SM++ G    +  +  +M  LF++ +V  A  + + 
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M  KG+  ++     ++      G++++A    D M++ G  PN   ++ LL      G+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A +LLD    +    +  +Y  ++D    +G    A+ +  ++  KG V D      
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737

Query: 627 LIAGLNQEGNTKQA 640
           L+ G  +  + ++A
Sbjct: 738 LVDGCCRLNDVERA 751



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 116/547 (21%), Positives = 208/547 (38%), Gaps = 84/547 (15%)

Query: 191 GISLDVVTYNTMINGYN-----------------------------------RFKKMDEA 215
           G S D V +  + +GY                                    R+ ++D  
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYV---------------------AVERADDALRIF 254
             ++  M E+N+   V +Y  +I  +                      A    D AL++ 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           + M    + P   TY  L+ GLC   ++ + + +L EM +      DN  +  L+    K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM-DSLGVSLDNHTYSLLIDGLLK 324

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
             + +AA  ++  M+   I  +   Y   I    K  + ++A  L D ++   +I  PQ 
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI--PQ- 381

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSA 433
                A +Y  +I+  C      +      ++ K+  V+ P  +  +++G    G+ D A
Sbjct: 382 -----AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           + IVK M   G   +   Y  LI+++L+     DA   L  M E G +P    + S++  
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L +  R+  A   +  MVE G+K N       +   +       A   +  M + G +PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
                 L++   +KGK I A       + +  + D  +Y  +++ L    K  +A  I  
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD---------------ILSRMIRGEMSRGS 655
           ++  KG   D  S   LI G ++ GN ++A                I+  M+ G   R  
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676

Query: 656 QKEKKQK 662
           + EK ++
Sbjct: 677 EIEKAKE 683



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 145/315 (46%), Gaps = 18/315 (5%)

Query: 25  LVYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           ++YN+L G    +   E A +    +   GL + +  T+  +I+   + G L  A  +  
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGL-HPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  KG+  D  ++  L++   +   V+ ++ IF   K+ G   S   ++AL   + + G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFG 780

Query: 141 RYMMAKRYFNKMLSEGIE----PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
           +  +     N+++    +    P   TYN+M+        LE A   F  M++  +   V
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           +TY +++NGY++  +  E   +F E     IEP  I Y+ +I  ++       AL + D+
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900

Query: 257 MKSFD-----VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLG 310
           M + +      K +  T  ALL G    G+M   +KV+  MV  +YIP  D++  ++L+ 
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP--DSATVIELIN 958

Query: 311 VQCKSGHLNAAADVL 325
             C S +    AD +
Sbjct: 959 ESCISSNQRVEADAV 973



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 102/513 (19%), Positives = 194/513 (37%), Gaps = 87/513 (16%)

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIK-------GYVAVERADDALRIF------DEMKS 259
           D + ++   +K++N   T++S    I+         +  +R DD  ++       D  K 
Sbjct: 33  DASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKV 92

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-----------------YIPPKDN 302
            + K ++ ++ AL   LC+ G   +   V+  M+ER                 ++   D+
Sbjct: 93  TEQKLDSFSFLAL--DLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDD 150

Query: 303 SVFMKLL---------------------GVQ-------CKS--------GHLNAAADVLK 326
            V   +L                     G++       CK           L+   DV K
Sbjct: 151 GVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYK 210

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLDMEAS-- 381
            M+  ++  +   Y +LI   C+A        +L K  EKE     L     L ++ S  
Sbjct: 211 GMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK-TEKEFRTATLNVDGALKLKESMI 269

Query: 382 ---------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
                    +Y+ +I  LC   +   A+    ++   GV LD   ++ LI G  K  N D
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           +A  +V  M   G+      Y C I    ++G    AK   D MI  G  P +  + S++
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           E    +  V+    ++  M ++ +  +      +++ +   G ++ A   +  M+ SG  
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           PN   + +L+    +  +   A+++L     +    D+  Y  ++  L  A +   A S 
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           L +++E G   +  +    I+G  +      AD
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 213/455 (46%), Gaps = 18/455 (3%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L +  +++ AR  L++M + G++ +   +   I  Y +      + K    M++ GV  +
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
                 L     ++G+ + A   +  M+ +GI     TY V++ G F + K++ A   F 
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+ +GI+ DV +Y  +ING+++   M +A  +F EM E+ + P VI Y  ++ G+    
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
             + A  + DEM    + PNAVTY  ++ G C +G + E  ++  EM  + + P D+ V+
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVY 735

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL--IENFCKAEMYDRAI-KLLDK 362
             L+   C+   +  A  +     +    + A    ++  +  F K E+    + +L+D 
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLI 421
             ++    +P         +YN MI +LC  G    A+  F Q+    ++  V  + +L+
Sbjct: 796 SFDR--FGKPNDV------TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM-----I 476
            G+ K G     F +       G+  D   Y  +I ++L++G    A   +D M     +
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           +DG   + S  R+++    + G ++ A +VM++MV
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 139/600 (23%), Positives = 248/600 (41%), Gaps = 67/600 (11%)

Query: 56  RETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGK-------KGIVQ 108
           + T+  +I+ L ++ +L  A+ +L++M   GV  D   + +LI+   K       KG+V 
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336

Query: 109 ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           E       M   G+      YD    ++ + G    AK  F+ M++ G+ P    Y  ++
Sbjct: 337 E-------MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
            G+     +        +MK R I +   TY T++ G      +D A  +  EM      
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P V+ YTT+IK ++   R  DA+R+  EMK   + P+   Y +L+ GL  A +M E +  
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L EMVE  + P                                     A  YG  I  + 
Sbjct: 510 LVEMVENGLKPN------------------------------------AFTYGAFISGYI 533

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +A  +  A K + ++ E  ++  P   L         +I   C  G+  +A   +R ++ 
Sbjct: 534 EASEFASADKYVKEMRECGVL--PNKVL------CTGLINEYCKKGKVIEACSAYRSMVD 585

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +G+L D   +  L+ G  K    D A EI + M  +G+  D  +Y  LI  + + G    
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A +  D M+E+G +P   ++  ++      G ++ A  ++  M  KG+  N      I++
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                G + EA    D M   G VP+   + +L+           A+ +      + C  
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCAS 764

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIM----EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             A +  +++ +   GKT     +L ++M    ++ G  +  + + +I  L +EGN + A
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 147/684 (21%), Positives = 295/684 (43%), Gaps = 61/684 (8%)

Query: 15  RALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + LVP ++ ++++ + L   K  E A      ++  G+ + D  T+  +I+ L +    +
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV-SLDNHTYSLLIDGLLKGRNAD 329

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A+ ++ +M   G+     M++  I    K+G+++++  +FD M   G+    ++Y +L 
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           +   R            +M    I  + +TY  ++ G   S  L+ A    ++M + G  
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            +VV Y T+I  + +  +  +A ++  EMKE+ I P +  Y ++I G    +R D+A   
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
             EM    +KPNA TY A + G  +A +     K ++EM E  + P +  +   L+   C
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP-NKVLCTGLINEYC 568

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAG----------------------------------- 338
           K G +  A    ++M+   I  +A                                    
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            YG+LI  F K     +A  + D++VE+   L P   +      YN ++   C +G+  K
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVII------YNMLLGGFCRSGEIEK 680

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A+    ++  KG+  + V +  +I G+ K G+   AF +   M  +G+  D+  Y  L++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV-- 515
              R  +   A T   +  + G + +++ F +++  +F+ G+ +  + V+  +++     
Sbjct: 741 GCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 516 --KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAA 570
             K N      +++ L   G++E A      M  +  +P    + SLL+   + G+    
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW-----KSSD 625
             + D  +      D   Y  +++A L  G T  A  ++ ++  K  V D       +  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 626 KLIAGLNQEGNTKQAD-ILSRMIR 648
            L++G  + G  + A+ ++  M+R
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVR 943



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 132/614 (21%), Positives = 252/614 (41%), Gaps = 75/614 (12%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D  +F +L + Y  K  ++E+V +F     L +   +     L   +LR  R  +    +
Sbjct: 150 DGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 150 NKMLSEGIEPTRHTYNVMLWGFF---------------------LSLKLETAIRFFEDMK 188
             M+   +     TY++++                          +L ++ A++  E M 
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +G+     TY+ +I+G  + K++++A+ L  EM    +     +Y+ +I G +    AD
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 249 -----------------------------------DALRIFDEMKSFDVKPNAVTYTALL 273
                                               A  +FD M +  + P A  Y +L+
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 274 PGLCDAGKMVEVQKVLREMVER--YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
            G C    + +  ++L EM +R   I P      +K +   C SG L+ A +++K MI  
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM---CSSGDLDGAYNIVKEMIAS 446

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
                   Y  LI+ F +   +  A+++L ++ E+ I   P      +   YN +I  L 
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI--AP------DIFCYNSLIIGLS 498

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPVAFN--NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              +  +A  F  ++++ G L P AF     I G+ +     SA + VK M   GV  + 
Sbjct: 499 KAKRMDEARSFLVEMVENG-LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
                LI  Y +KG+  +A +A  SM++ G    +  +  +M  LF++ +V  A  + + 
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M  KG+  ++     ++      G++++A    D M++ G  PN   ++ LL      G+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A +LLD    +    +  +Y  ++D    +G    A+ +  ++  KG V D      
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737

Query: 627 LIAGLNQEGNTKQA 640
           L+ G  +  + ++A
Sbjct: 738 LVDGCCRLNDVERA 751



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 116/547 (21%), Positives = 208/547 (38%), Gaps = 84/547 (15%)

Query: 191 GISLDVVTYNTMINGYN-----------------------------------RFKKMDEA 215
           G S D V +  + +GY                                    R+ ++D  
Sbjct: 146 GKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYV---------------------AVERADDALRIF 254
             ++  M E+N+   V +Y  +I  +                      A    D AL++ 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           + M    + P   TY  L+ GLC   ++ + + +L EM +      DN  +  L+    K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM-DSLGVSLDNHTYSLLIDGLLK 324

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
             + +AA  ++  M+   I  +   Y   I    K  + ++A  L D ++   +I  PQ 
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI--PQ- 381

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSA 433
                A +Y  +I+  C      +      ++ K+  V+ P  +  +++G    G+ D A
Sbjct: 382 -----AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           + IVK M   G   +   Y  LI+++L+     DA   L  M E G +P    + S++  
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L +  R+  A   +  MVE G+K N       +   +       A   +  M + G +PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
                 L++   +KGK I A       + +  + D  +Y  +++ L    K  +A  I  
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD---------------ILSRMIRGEMSRGS 655
           ++  KG   D  S   LI G ++ GN ++A                I+  M+ G   R  
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676

Query: 656 QKEKKQK 662
           + EK ++
Sbjct: 677 EIEKAKE 683



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 145/315 (46%), Gaps = 18/315 (5%)

Query: 25  LVYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           ++YN+L G    +   E A +    +   GL + +  T+  +I+   + G L  A  +  
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGL-HPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  KG+  D  ++  L++   +   V+ ++ IF   K+ G   S   ++AL   + + G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFG 780

Query: 141 RYMMAKRYFNKMLSEGIE----PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
           +  +     N+++    +    P   TYN+M+        LE A   F  M++  +   V
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           +TY +++NGY++  +  E   +F E     IEP  I Y+ +I  ++       AL + D+
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900

Query: 257 MKSFD-----VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLG 310
           M + +      K +  T  ALL G    G+M   +KV+  MV  +YIP  D++  ++L+ 
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP--DSATVIELIN 958

Query: 311 VQCKSGHLNAAADVL 325
             C S +    AD +
Sbjct: 959 ESCISSNQRVEADAV 973



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 102/513 (19%), Positives = 194/513 (37%), Gaps = 87/513 (16%)

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIK-------GYVAVERADDALRIF------DEMKS 259
           D + ++   +K++N   T++S    I+         +  +R DD  ++       D  K 
Sbjct: 33  DASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKV 92

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-----------------YIPPKDN 302
            + K ++ ++ AL   LC+ G   +   V+  M+ER                 ++   D+
Sbjct: 93  TEQKLDSFSFLAL--DLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDD 150

Query: 303 SVFMKLL---------------------GVQ-------CKS--------GHLNAAADVLK 326
            V   +L                     G++       CK           L+   DV K
Sbjct: 151 GVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYK 210

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLDMEAS-- 381
            M+  ++  +   Y +LI   C+A        +L K  EKE     L     L ++ S  
Sbjct: 211 GMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK-TEKEFRTATLNVDGALKLKESMI 269

Query: 382 ---------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
                    +Y+ +I  LC   +   A+    ++   GV LD   ++ LI G  K  N D
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           +A  +V  M   G+      Y C I    ++G    AK   D MI  G  P +  + S++
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           E    +  V+    ++  M ++ +  +      +++ +   G ++ A   +  M+ SG  
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           PN   + +L+    +  +   A+++L     +    D+  Y  ++  L  A +   A S 
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           L +++E G   +  +    I+G  +      AD
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 197/414 (47%), Gaps = 12/414 (2%)

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           + ++ K  V  +   F ++I    + G      ++  ++++ G+  +V  Y  L     +
Sbjct: 146 IFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCK 205

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G  M+AK  F KM   G+ P +HTY+V++ GFF         + +E+M   GI  +   
Sbjct: 206 NGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYA 265

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN +I+ Y     +D+A K+FAEM+EK I   V++Y  +I G    ++  +A+++  ++ 
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
              + PN VTY  L+ G CD GKM    ++  ++    + P   + +  L+    K  +L
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT-YNTLIAGYSKVENL 384

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A D++K M    I      Y ILI+ F +    D+A + +  L+EK       S L  
Sbjct: 385 AGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACE-MHSLMEK-------SGLVP 436

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEI 436
           +  +Y+ +I   C NG   +A   F+ L +   L P  V +N +I G+ KEG+   A  +
Sbjct: 437 DVYTYSVLIHGXCVNGNMKEASKPFKSLGEMH-LQPNSVIYNTMIHGYCKEGSSYRALRL 495

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           +  M   G+  +  ++   +    R  +  +A+  L  MI  G  P+ SL++ V
Sbjct: 496 LNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 178/364 (48%), Gaps = 15/364 (4%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   + G +  A+ +   M + G+  ++  + VL+  + K+G+ +E  ++++ M + G
Sbjct: 199 LIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSG 258

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +  +Y+ L       G    A + F +M  +GI     TYN+++ G     K   A+
Sbjct: 259 IVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAV 318

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +    +   G+S ++VTYN +ING+    KMD A +LF ++K   + PT+++Y T+I GY
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY 378

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPG---LCDAGKMVEVQKVLREMVERYIP 298
             VE    AL +  EM+   +  + VTYT L+     L    K  E+  ++ +     +P
Sbjct: 379 SKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEK--SGLVP 436

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
             D   +  L+   C +G++  A+   K++  + +   +  Y  +I  +CK     RA++
Sbjct: 437 --DVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALR 494

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFN 418
           LL+++V   ++  P        +S+   +  LC + +  +AE+   Q++  G+   V+  
Sbjct: 495 LLNEMVHSGMV--PN------VASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546

Query: 419 NLIR 422
            ++ 
Sbjct: 547 KMVH 550



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 121/553 (21%), Positives = 229/553 (41%), Gaps = 63/553 (11%)

Query: 18  VPQFDHNLVYNV--LHGAKNSEHALQF-FRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
           VP     L++N     G  ++ H++ F    +  +G+    +   L++I   GR+     
Sbjct: 17  VPPIKTLLLFNTASYQGLHHTSHSISFILNHLLSSGMLPQAQSLILRLIS--GRI----- 69

Query: 75  ARCILLDMPK---KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
              ++L + +           +++ ++ +Y       +++     M   G      +++ 
Sbjct: 70  PSSLMLQLTQAHFTSCSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNN 129

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L  L++R   +  A   FN +L   +    +++ +M+ G   +       R    ++  G
Sbjct: 130 LLCLLIRSNYFDKAWWIFN-VLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFG 188

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           +S +VV Y T+I+G  +   +  A+ LF +M    + P   +Y+ ++ G+       +  
Sbjct: 189 LSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGF 248

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           ++++ M    + PNA  Y  L+   C+ G + +  KV  EM E+              G+
Sbjct: 249 QMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREK--------------GI 294

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            C                   + T    Y ILI   C+ + +  A+KL+ K+   ++ L 
Sbjct: 295 AC------------------GVMT----YNILIGGLCRGKKFGEAVKLVHKV--NKVGLS 330

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGN 429
           P         +YN +I   C  G+   A   F QL   G L P  V +N LI G+SK  N
Sbjct: 331 PNIV------TYNILINGFCDVGKMDTAVRLFNQLKSSG-LSPTLVTYNTLIAGYSKVEN 383

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE-DGHSPASSLFR 488
              A ++VK M  R + R    Y  LI+++ R     D    + S++E  G  P    + 
Sbjct: 384 LAGALDLVKEMEERCIARSKVTYTILIDAFARLNY-TDKACEMHSLMEKSGLVPDVYTYS 442

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            ++     +G ++ AS+  KS+ E  ++ N  +   ++      G    AL  ++ M+ S
Sbjct: 443 VLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502

Query: 549 GSVPNFDSLLSVL 561
           G VPN  S  S +
Sbjct: 503 GMVPNVASFCSTM 515



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 166/390 (42%), Gaps = 34/390 (8%)

Query: 268 TYTALLPGLCDA----GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA-- 321
           TYT L   + +A        +    L  M+     P  N+ F  LL +  +S + + A  
Sbjct: 87  TYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNT-FNNLLCLLIRSNYFDKAWW 145

Query: 322 -ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
             +VLK+ + L+    A  +GI+I   C+A  + R  +LL  L  +E  L P   +    
Sbjct: 146 IFNVLKSKVVLN----AYSFGIMITGCCEAGYFVRVFRLLAVL--EEFGLSPNVVI---- 195

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
             Y  +I   C NG    A+  F ++ + G++ +   ++ L+ G  K+G     F++ + 
Sbjct: 196 --YTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYEN 253

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M R G+  +A AY CLI  Y   G    A      M E G +     +  ++  L    +
Sbjct: 254 MNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDS 556
              A +++  + + G+  N+     ++      G ++ A+   + +  SG  P    +++
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNT 373

Query: 557 LLSVLSEKGKTIAAVKLL----DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
           L++  S+      A+ L+    + C+ R  +    +Y  ++DA      T  A   +  +
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIARSKV----TYTILIDAFARLNYTDKACE-MHSL 428

Query: 613 MEKGG-VTDWKSSDKLIAGLNQEGNTKQAD 641
           MEK G V D  +   LI G    GN K+A 
Sbjct: 429 MEKSGLVPDVYTYSVLIHGXCVNGNMKEAS 458



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 5/249 (2%)

Query: 25  LVYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN+L G     K    A++    V + GL + +  T+  +I     VGK++ A  +  
Sbjct: 299 MTYNILIGGLCRGKKFGEAVKLVHKVNKVGL-SPNIVTYNILINGFCDVGKMDTAVRLFN 357

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            +   G+      +  LI  Y K   +  ++ +   M++  + RS  +Y  L     R  
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLN 417

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A    + M   G+ P  +TY+V++ G  ++  ++ A + F+ +    +  + V YN
Sbjct: 418 YTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYN 477

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           TMI+GY +      A +L  EM    + P V S+ + +      E+  +A  +  +M + 
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINS 537

Query: 261 DVKPNAVTY 269
            +KP+   Y
Sbjct: 538 GLKPSVSLY 546



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/224 (20%), Positives = 101/224 (45%), Gaps = 3/224 (1%)

Query: 12  NKIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           NK+  L P    +N++ N        + A++ F  ++ +GL +    T+  +I    +V 
Sbjct: 325 NKV-GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGL-SPTLVTYNTLIAGYSKVE 382

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            L  A  ++ +M ++ +   +  + +LI+++ +     ++ ++  +M++ G+   V +Y 
Sbjct: 383 NLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYS 442

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L       G    A + F  +    ++P    YN M+ G+        A+R   +M   
Sbjct: 443 VLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           G+  +V ++ + +    R +K  EAE L  +M    ++P+V  Y
Sbjct: 503 GMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 457

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 210/446 (47%), Gaps = 15/446 (3%)

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           I  + +  ++  A  +L+D  K G+  D   +  LI+ Y +   +  +  I + MK+ G+
Sbjct: 14  ISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGI 73

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
              V SY++L    +R+     +   F++ML  GI P   +YN+++  +F   K E A  
Sbjct: 74  NPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANG 133

Query: 183 FFEDMKSRG-ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            F D+  RG I   + +YN MING  +   ++ A  LF  ++ +   P V++Y  MI G 
Sbjct: 134 VFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGL 193

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R  DA R+ +E   F  +PNA+TYT ++      G++ +  ++L EM  R     D
Sbjct: 194 CKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEM-RRKGFTFD 252

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  ++    K+G +  A ++ + M+   +  +   Y  +I  FC+   +D A++L+D
Sbjct: 253 GFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVD 312

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           + +EK+ +   Q T       +  +I  LC +G    AE     +   G   + VAFN++
Sbjct: 313 E-IEKQGMKCDQYT-------HTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSI 364

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           +    K G+ D A ++   M      +D+  Y  L+ +  R  +   A   L + IEDG 
Sbjct: 365 LDCLGKAGDIDKAVKVFDSME----VKDSFTYTSLLHNLCRAKKFRIASKLLVASIEDGF 420

Query: 481 SPASSLFRSVMESLFEDGRVQTASRV 506
               +  R+V++ L   G V  A +V
Sbjct: 421 QILRATQRAVIDGLTTSGLVYEARKV 446



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 188/424 (44%), Gaps = 12/424 (2%)

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G++ D++TYNT+I+GY RF  +D A  +   MKE  I P V+SY ++  G V       +
Sbjct: 37  GLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKS 96

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLL 309
           L +FDEM    ++P+  +Y  L+      GK  E   V R++ ER  I P   S  + + 
Sbjct: 97  LDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMIN 156

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
           G+ CK+G++N A  + + + R     E   Y  +I   CKA     A ++L++  +    
Sbjct: 157 GL-CKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCD---- 211

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEG 428
                  +  A +Y  +++     G+  +      ++ +KG   D  A+  ++    K G
Sbjct: 212 ----FGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTG 267

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             + A EI + M   G+  D  +Y  +I  + R+G   +A   +D + + G         
Sbjct: 268 RIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHT 327

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            ++  L +DG  + A + +  M   G   NL     IL+ L   G +++A+   D M   
Sbjct: 328 IIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVK 387

Query: 549 GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
            S   + SLL  L    K   A KLL   +     I  A+   V+D L  +G    A  +
Sbjct: 388 DSFT-YTSLLHNLCRAKKFRIASKLLVASIEDGFQILRATQRAVIDGLTTSGLVYEARKV 446

Query: 609 LFKI 612
             KI
Sbjct: 447 KLKI 450



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/421 (22%), Positives = 182/421 (43%), Gaps = 52/421 (12%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING---------- 205
           G+ P   TYN ++ G+   + ++ A      MK  GI+ DVV+YN++ +G          
Sbjct: 37  GLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKS 96

Query: 206 -------------------------YNRFKKMDEAEKLFAEMKEKN-IEPTVISYTTMIK 239
                                    Y R  K +EA  +F ++ E+  I P++ SY  MI 
Sbjct: 97  LDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMIN 156

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G       ++AL +F  ++     P  +TY A++ GLC A ++ + ++VL E  +    P
Sbjct: 157 GLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEP 216

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            +   +  ++    + G L    ++L  M R     +   Y  ++    K    + A ++
Sbjct: 217 -NAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEI 275

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
            +K++   ++  P      + +SYN MI   C  G+  +A     ++ K+G+  D     
Sbjct: 276 AEKMMSNGLV--P------DLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHT 327

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM-IE 477
            +I G  K+GN + A + +  M   G   +  A+  +++   + G+   A    DSM ++
Sbjct: 328 IIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVK 387

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           D     S  + S++ +L    + + AS+++ + +E G +        +++ L   G V E
Sbjct: 388 D-----SFTYTSLLHNLCRAKKFRIASKLLVASIEDGFQILRATQRAVIDGLTTSGLVYE 442

Query: 538 A 538
           A
Sbjct: 443 A 443



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 102/447 (22%), Positives = 186/447 (41%), Gaps = 20/447 (4%)

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N  I+   +  ++ +AE +  +  +  + P +I+Y T+I GY      D A  I + MK 
Sbjct: 11  NITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKE 70

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+ V+Y +L  G      + +   +  EM++  I P D   +  L+    + G   
Sbjct: 71  AGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRP-DVWSYNILMHCYFRLGKPE 129

Query: 320 AAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
            A  V + +  R  I      Y ++I   CK    + A+ L   L  +  +  P      
Sbjct: 130 EANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFV--P------ 181

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEI 436
           E  +YN MI  LC   +   A     +    G  +P  + +  +++   + G  +   EI
Sbjct: 182 EVLTYNAMINGLCKARRLADARRVLNEFCDFG-FEPNAITYTTVMKCCFRCGRLEQGLEI 240

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           +  M R+G   D  AY  ++ + ++ G   +A    + M+ +G  P  + + +++     
Sbjct: 241 LSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCR 300

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPN 553
            GR   A R++  + ++G+K +      I+  L   G+ E A   +D M   G   ++  
Sbjct: 301 QGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVA 360

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           F+S+L  L + G    AVK+ D    +D      +Y  +L  L  A K   A  +L   +
Sbjct: 361 FNSILDCLGKAGDIDKAVKVFDSMEVKDSF----TYTSLLHNLCRAKKFRIASKLLVASI 416

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           E G      +   +I GL   G   +A
Sbjct: 417 EDGFQILRATQRAVIDGLTTSGLVYEA 443



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/371 (21%), Positives = 161/371 (43%), Gaps = 43/371 (11%)

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  +C + ++ + + VL + ++  + P D   +  L+   C+   ++AA ++L  M    
Sbjct: 14  ISTMCKSNQIAKAETVLIDGIKLGLNP-DIITYNTLIDGYCRFVGIDAAYNILNRMKEAG 72

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           I  +   Y  L     +  +  +++ L D++++  I  RP      +  SYN ++     
Sbjct: 73  INPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGI--RP------DVWSYNILMHCYFR 124

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            G+  +A   FR + ++G + P   ++N +I G  K G  ++A  + + + RRG   +  
Sbjct: 125 LGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVL 184

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  +I    +    ADA+  L+   + G  P +  + +VM+  F  GR++    ++  M
Sbjct: 185 TYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEM 244

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAA 570
             KG   +      ++ AL+  G +EEA    + MM +G VP                  
Sbjct: 245 RRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVP------------------ 286

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
                         DLASY  +++     G+   A  ++ +I ++G   D  +   +I G
Sbjct: 287 --------------DLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHG 332

Query: 631 LNQEGNTKQAD 641
           L ++GN + A+
Sbjct: 333 LCKDGNFEGAE 343



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 7/320 (2%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           LQ+ IR  V  + +N++ +        E A   FR +   G       ++  MI  L + 
Sbjct: 104 LQSGIRPDV--WSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKN 161

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G +N+A  +  ++ ++G   +   +  +I    K   + ++ ++ +     G E +  +Y
Sbjct: 162 GYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITY 221

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             + K   R GR        ++M  +G       Y  ++     + ++E A    E M S
Sbjct: 222 TTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMS 281

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G+  D+ +YNTMIN + R  + DEA +L  E++++ ++    ++T +I G       + 
Sbjct: 282 NGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEG 341

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A +  D M +     N V + ++L  L  AG + +  KV   M       KD+  +  LL
Sbjct: 342 AEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSM-----EVKDSFTYTSLL 396

Query: 310 GVQCKSGHLNAAADVLKAMI 329
              C++     A+ +L A I
Sbjct: 397 HNLCRAKKFRIASKLLVASI 416


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 228/502 (45%), Gaps = 11/502 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A +FF W  +   + H  E ++ +I++L      +  RCI  +  +KG          LI
Sbjct: 138 AFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLI 197

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            S+G  G+V+E + ++  MK+ G+E S+ +++ L   ++       A+R F  M    I 
Sbjct: 198 RSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIG 257

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   +YN M+ G+  +   + A+  F DM+ R +  D +TY T+I         D    L
Sbjct: 258 PDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHL 317

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           + EM+E+ +E    +Y+ +I G     R  +   +F+ M     K N   YTAL+     
Sbjct: 318 YQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGK 377

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G + E   +   M      P D +  + + G+ CKSG L+ A +  +      +   A 
Sbjct: 378 NGNVNEAINLFERMKGEGFEPDDVTYGVIVNGL-CKSGRLDEAVEYFEFCKDNEVAVNAM 436

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y  LI+   KA   D A K  +++VE+     PQ     ++  YN +I  L  +G+  +
Sbjct: 437 FYSSLIDGLGKAGRVDEAEKFFEEMVERGC---PQ-----DSYCYNALIDALAKSGKMEE 488

Query: 399 AEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A + F+++ K+G    V  +  LI G  KE   + A ++  +M  +G+     ++  L  
Sbjct: 489 ALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSV 548

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
                G+ A A   LD +   G  P ++ F  ++  L + GR + A ++   +V++G + 
Sbjct: 549 GLCLSGKVARACKILDELAPMGVIPETA-FEDMINVLCKAGRTEQACKLADGIVDRGREV 607

Query: 518 NLDLVAKILEALLMRGHVEEAL 539
              +   ++ AL   G+ + A+
Sbjct: 608 PGRVRTILINALRKAGNADLAM 629



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 206/463 (44%), Gaps = 16/463 (3%)

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           KQ      ++ Y +L  ++     +   +  F +   +G   T    N ++  F     +
Sbjct: 147 KQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMV 206

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E  +  +  MK  GI   + T+N ++NG      ++ AE++F  M+   I P V+SY TM
Sbjct: 207 EELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTM 266

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-- 295
           IKGY        A+  F +M+  +++P+ +TY  L+      G       + +EM ER  
Sbjct: 267 IKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGL 326

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            IPP   S+   ++G  CK G     + V + M +         Y  LI+ + K    + 
Sbjct: 327 EIPPHAYSL---VIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNE 383

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           AI L +++             + +  +Y  ++  LC +G+  +A  +F       V ++ 
Sbjct: 384 AINLFERM--------KGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNA 435

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           + +++LI G  K G  D A +  + M  RG P+D+  Y  LI++  + G+  +A      
Sbjct: 436 MFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKR 495

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M ++G       +  ++  LF++ R + A ++   M++KG+         +   L + G 
Sbjct: 496 MEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGK 555

Query: 535 VEEALGRIDLMMQSGSVPN--FDSLLSVLSEKGKTIAAVKLLD 575
           V  A   +D +   G +P   F+ +++VL + G+T  A KL D
Sbjct: 556 VARACKILDELAPMGVIPETAFEDMINVLCKAGRTEQACKLAD 598



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 183/398 (45%), Gaps = 11/398 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  +I+ Y K G  +++++ F  M++  +E    +Y  L +     G +      + +M 
Sbjct: 263 YNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEME 322

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+E   H Y++++ G     +       FE+M  +G   +V  Y  +I+ Y +   ++
Sbjct: 323 ERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVN 382

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  LF  MK +  EP  ++Y  ++ G     R D+A+  F+  K  +V  NA+ Y++L+
Sbjct: 383 EAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLI 442

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GL  AG++ E +K   EMVER  P +D+  +  L+    KSG +  A  + K M +   
Sbjct: 443 DGLGKAGRVDEAEKFFEEMVERGCP-QDSYCYNALIDALAKSGKMEEALVLFKRMEKEGC 501

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y ILI    K    + A+KL D +++K I   P +      +S+  +   LC +
Sbjct: 502 DQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGIT--PTT------ASFRALSVGLCLS 553

Query: 394 GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           G+  +A     +L   GV+   AF ++I    K G  + A ++   +  RG         
Sbjct: 554 GKVARACKILDELAPMGVIPETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRT 613

Query: 454 CLIESYLRKGEPAD-AKTALDSMIEDGHSPASSLFRSV 490
            LI + LRK   AD A   + S I  G+    S+ R V
Sbjct: 614 ILINA-LRKAGNADLAMKLMHSKIGIGYDRMGSIKRRV 650



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 3/326 (0%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N +  L  ++ +E  GL        L +I  L + G+      +  +M KKG + +  ++
Sbjct: 310 NFDSCLHLYQEMEERGLEIPPHAYSL-VIGGLCKDGRTVEGSSVFENMNKKGCKANVAIY 368

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             LI++YGK G V E++ +F+ MK  G E    +Y  +   + + GR   A  YF     
Sbjct: 369 TALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKD 428

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
             +      Y+ ++ G   + +++ A +FFE+M  RG   D   YN +I+   +  KM+E
Sbjct: 429 NEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEE 488

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A  LF  M+++  + TV +YT +I G     R ++AL+++D M    + P   ++ AL  
Sbjct: 489 ALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSV 548

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GLC +GK+    K+L E+    + P+  + F  ++ V CK+G    A  +   ++     
Sbjct: 549 GLCLSGKVARACKILDELAPMGVIPE--TAFEDMINVLCKAGRTEQACKLADGIVDRGRE 606

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLL 360
                  ILI    KA   D A+KL+
Sbjct: 607 VPGRVRTILINALRKAGNADLAMKLM 632



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 160/334 (47%), Gaps = 3/334 (0%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           A N++ A++ F  +E+  L   D+ T+L +I+     G  +    +  +M ++G++    
Sbjct: 273 AGNTKKAMEKFTDMEKRNL-EPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPH 331

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            + ++I    K G   E   +F+ M + G + +V  Y AL     + G    A   F +M
Sbjct: 332 AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERM 391

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
             EG EP   TY V++ G   S +L+ A+ +FE  K   ++++ + Y+++I+G  +  ++
Sbjct: 392 KGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRV 451

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           DEAEK F EM E+        Y  +I       + ++AL +F  M+         TYT L
Sbjct: 452 DEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTIL 511

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GL    +  E  K+   M+++ I P   S     +G+ C SG +  A  +L  +  + 
Sbjct: 512 ISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGL-CLSGKVARACKILDELAPMG 570

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
           +  E   +  +I   CKA   ++A KL D +V++
Sbjct: 571 VIPETA-FEDMINVLCKAGRTEQACKLADGIVDR 603



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 106/477 (22%), Positives = 206/477 (43%), Gaps = 52/477 (10%)

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F + K +G  + V   N++I  +     ++E   ++  MKE  IEP++ ++  ++ G V 
Sbjct: 178 FGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVN 237

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
               + A R+F+ M+   + P+ V+Y  ++ G C AG   +  +   +M +R + P D  
Sbjct: 238 SMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEP-DKI 296

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            ++ L+      G+                                   +D  + L  ++
Sbjct: 297 TYLTLIQACYSEGN-----------------------------------FDSCLHLYQEM 321

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIR 422
            E+ + + P +        Y+ +I  LC +G+T +    F  + KKG    VA +  LI 
Sbjct: 322 EERGLEIPPHA--------YSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALID 373

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
            + K GN + A  + + M   G   D   Y  ++    + G   +A    +   ++  + 
Sbjct: 374 AYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAV 433

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            +  + S+++ L + GRV  A +  + MVE+G  ++      +++AL   G +EEAL   
Sbjct: 434 NAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLF 493

Query: 543 DLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             M + G   +V  +  L+S L ++ +   A+KL D  + +      AS+  +   L  +
Sbjct: 494 KRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLS 553

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQ 656
           GK   A  IL ++   G + +    D +I  L + G T+QA    ++  G + RG +
Sbjct: 554 GKVARACKILDELAPMGVIPETAFED-MINVLCKAGRTEQA---CKLADGIVDRGRE 606


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 147/644 (22%), Positives = 271/644 (42%), Gaps = 42/644 (6%)

Query: 4   RAWTTRLQNKIRA---LVPQFDHNLVYNVLHG---AKNSEHALQFFRWVERAGLFNHDRE 57
           R  +TR  NK RA   L P      V ++      A     AL FF W+ R   F H  +
Sbjct: 32  RILSTRRWNKGRAYKRLAPSVTAAHVADLFRAESTAPEPATALAFFEWLARRDGFRHTAD 91

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM------------------------ 93
           +H  ++ +L R         +++ M        EDM                        
Sbjct: 92  SHAALLHLLSRRRAPAQYERLVVSMLNCS-DTAEDMRVSADAIQAIRRTGSARLALSPKC 150

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +   + S  +  + +   +++  + Q G+     +Y+ + K   + G    A R F  +L
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+EP   T N ++ G+  + +L  A   F  M   G   +  +Y  +I G    K + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  LF  MK     P V ++T +I G     R  DA  +FD M    V P+ +TY A++
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G    G+M +  K+ +E++E+     D+  +  L+   C       A ++L   ++   
Sbjct: 331 VGYSKLGRMNDALKI-KELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGF 388

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 +  LI  +C AE +D A+++ +K++        +  LD++   +  +I  L   
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSS------KCKLDLQV--FGKLINSLIKK 440

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A+    ++   G++ + + + ++I G+ K G  D A E++K+M R G   +A  Y
Sbjct: 441 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 500

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L+   ++  +   A   L  M +DG  P    + ++++   ++     A R+ + M +
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
            G+K +    A + +AL   G  EEA   I     + +   + +L+   S+ G T  A  
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAAT 620

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L++  +   C  D  +Y  +L AL    +   A  IL ++  +G
Sbjct: 621 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 248/578 (42%), Gaps = 70/578 (12%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI  Y       +++++ + M     +  ++ +  L   ++++ R   AK   N++ 
Sbjct: 395 FTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEIS 454

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           + G+ P   TY  ++ G+  S K++ A+   + M+  G   +  TYN+++ G  + KK+ 
Sbjct: 455 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 514

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  L  +M++  I P VI+YTT+++G       D+A R+F+ M+   +KP+   Y  L 
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574

Query: 274 PGLCDAGKMVEVQKVL----------------------------REMVERYI---PPKDN 302
             LC AG+  E    +                              ++ER I      D+
Sbjct: 575 DALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +  LL   CK   LN A  +L  M    I      Y ILI+   +   +D A ++ ++
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
           +          S     A++Y   I   C  G+   AE    ++ ++GV  D V +N LI
Sbjct: 695 MT--------SSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 746

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA---------- 471
            G    G  D AF  +K M       +   Y CL+  +L KG  A  ++           
Sbjct: 747 DGCGHMGYIDRAFSTLKRMVGASCEPNYWTY-CLLLKHLLKGNLAYVRSVDTSGMWNLIE 805

Query: 472 -------LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
                  L+ M++ G +P  + + S++    + GR++ A  ++  M  KG+  N D+   
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFC---- 577
           +++        E+AL  + +M + G  P  +S   L+  L  +G     VK L FC    
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGD-FEKVKSL-FCDLLE 923

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
           LG +   D  +++ + D LL AG     + +L  IMEK
Sbjct: 924 LGYN--HDEVAWKILNDGLLKAGYVDICFQML-SIMEK 958



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 138/625 (22%), Positives = 275/625 (44%), Gaps = 60/625 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M E +GRV            + + G+  D   +  +I+SY K+G +  + + F ++ + G
Sbjct: 163 MTEYMGRVYS---------QLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGG 213

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +E    + +AL     R G    A   F  M   G +   ++Y +++ G   +  +  A+
Sbjct: 214 LEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREAL 273

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F  MK  G S +V  +  +I+G  +  ++ +A  LF  M +  + P+V++Y  MI GY
Sbjct: 274 VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGY 333

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK- 300
             + R +DAL+I + M+     P+  TY  L+ GLCD  K  E +++L   V+    P  
Sbjct: 334 SKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTV 392

Query: 301 ---------------------------------DNSVFMKLLGVQCKSGHLNAAADVLKA 327
                                            D  VF KL+    K   L  A ++L  
Sbjct: 393 VTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNE 452

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           +    +      Y  +I+ +CK+   D A+++L K++E++   +P       A +YN ++
Sbjct: 453 ISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-KMMERDGC-QPN------AWTYNSLM 504

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             L  + +  KA     ++ K G++ + + +  L++G   E + D+AF + ++M + G+ 
Sbjct: 505 YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 564

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D  AY  L ++  + G    A+ A   ++  G +     + ++++   + G    A+ +
Sbjct: 565 PDEHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 621

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSE 563
           ++ M+++G   +    + +L AL  +  + EAL  +D M   G   ++  +  L+  +  
Sbjct: 622 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 681

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
           +GK   A ++ +            +Y   +++    G+  +A  ++ K+  +G   D  +
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741

Query: 624 SDKLIAGLNQEGNTKQA-DILSRMI 647
            + LI G    G   +A   L RM+
Sbjct: 742 YNILIDGCGHMGYIDRAFSTLKRMV 766



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 175/411 (42%), Gaps = 61/411 (14%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I+   + G  + A  ++  M  +G   D   + VL+ +  K+  + E++ I D M 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
             G++ ++ +Y  L   +LR G++  AKR +N+M S G +P+  TY V +  +    +LE
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT-- 236
            A      M+  G++ DVVTYN +I+G      +D A      M   + EP   +Y    
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 237 --MIKGYVAVERADD------------ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
             ++KG +A  R+ D              ++ + M    + P   TY++L+ G C AG++
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E   +L  M  + + P ++                                     Y +
Sbjct: 842 EEACLLLDHMCGKGLSPNEDI------------------------------------YTL 865

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           LI+  C  + +++A+  +   +  E   +PQ        SY  ++  LC+ G   K +  
Sbjct: 866 LIKCCCDTKFFEKALSFVS--IMSECGFQPQ------LESYRLLVVGLCNEGDFEKVKSL 917

Query: 403 FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           F  L++ G   D VA+  L  G  K G  D  F+++ IM +R     +  Y
Sbjct: 918 FCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY 968



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/336 (20%), Positives = 137/336 (40%), Gaps = 17/336 (5%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L +  +LN A  IL  M  +G++     + +LI+   ++G    + +++
Sbjct: 633 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMY 692

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M   G + S  +Y        + GR   A+    KM  EG+ P   TYN+++ G    
Sbjct: 693 NEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHM 752

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMI----------------NGYNRFKKMDEAEKL 218
             ++ A    + M       +  TY  ++                +G     ++D   +L
Sbjct: 753 GYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQL 812

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              M +  + PTV +Y+++I G+    R ++A  + D M    + PN   YT L+   CD
Sbjct: 813 LERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCD 872

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
                +    +  M E    P+  S  + ++G+ C  G       +   ++ L    +  
Sbjct: 873 TKFFEKALSFVSIMSECGFQPQLESYRLLVVGL-CNEGDFEKVKSLFCDLLELGYNHDEV 931

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            + IL +   KA   D   ++L  + ++   +  Q+
Sbjct: 932 AWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQT 967



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 17/277 (6%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           +HA + +  +  +G       T+   I    + G+L  A  ++L M ++GV  D   + +
Sbjct: 686 DHAKRMYNEMTSSG-HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR-----------RGRYMMA 145
           LI+  G  G +  +      M     E +  +Y  L K +L+            G + + 
Sbjct: 745 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLI 804

Query: 146 K-----RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           +     +   +M+  G+ PT  TY+ ++ GF  + +LE A    + M  +G+S +   Y 
Sbjct: 805 ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYT 864

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I      K  ++A    + M E   +P + SY  ++ G       +    +F ++   
Sbjct: 865 LLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLEL 924

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
               + V +  L  GL  AG +    ++L  M +RY 
Sbjct: 925 GYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYC 961



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 9/176 (5%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQES 110
            N    T+  +I    + G+L  A C+LLD M  KG+  +ED++ +LI+        +++
Sbjct: 821 LNPTVTTYSSLIAGFCKAGRLEEA-CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKA 879

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           +    IM + G +  ++SY  L   +   G +   K  F  +L  G       + ++  G
Sbjct: 880 LSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDG 939

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE-AEKLFAEMKEK 225
              +  ++   +    M+ R   +   TY  + N      KM E +  L +E++E+
Sbjct: 940 LLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN------KMHEVSSSLVSEVREE 989


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 222/486 (45%), Gaps = 41/486 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  LGR+G+ + A+ I       G   +  ++  LI +YG+ G + ++V+IF+ MK + 
Sbjct: 127 IISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV- 185

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + ++  Y+A+     + G Y  A R F +ML +G+ P R T+N ++     + + E   
Sbjct: 186 CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECD 245

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKG 240
           R F +M+ RGI+ D VTYNT+I  Y R  +M     L   M K   IEP+VI+Y+TMI G
Sbjct: 246 RIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDG 305

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y  +  A +A+ +F EM++ +V+P+ + Y  ++      G   E   + R M E     K
Sbjct: 306 YAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGF-AK 364

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  LL    K G    A  +L+ M +         Y  LI+ +CK   +  A+ L 
Sbjct: 365 DIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALF 424

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
             +  K+  L+P   L      Y+ ++   C NG   +A     ++   G+  + + +N+
Sbjct: 425 QDV--KKAGLQPDVVL------YSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNS 476

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+  + ++           +M R+  P+     +  +   L+     D ++ +D      
Sbjct: 477 LLDAYGRQC----------LMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVD------ 520

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P             +   V  A+RV + M + GVK N+   + IL A      VE+A 
Sbjct: 521 --PKQ-----------KQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDAS 567

Query: 540 GRIDLM 545
             ++ M
Sbjct: 568 SLLEAM 573



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 4/294 (1%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V +      +   AL+ FR +   G+ + DR T   +I   GR  +      I  +M
Sbjct: 193 YNAVIDACSKGGDYPTALRIFREMLEQGM-SPDRITFNTLISAAGRANRWEECDRIFAEM 251

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGR 141
            ++G+  D+  +  LI +Y + G +     + + M K  G+E SV +Y  +     + G 
Sbjct: 252 EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGL 311

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F +M ++ +EP    YN M+         + A      M+  G + D+VTYN 
Sbjct: 312 AHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNA 371

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++ Y +  K  EA  L  EMK++   P +++Y+ +I  Y       DA+ +F ++K   
Sbjct: 372 LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAG 431

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQC 313
           ++P+ V Y+ L+ G C  G   E   +L EM +  I P     +  +   G QC
Sbjct: 432 LQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQC 485



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 170/379 (44%), Gaps = 11/379 (2%)

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D VT +T+I+   R  + D A+ +F           V  Y+++I  Y    +   A+ IF
Sbjct: 121 DKVT-STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIF 179

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           + MK    KPN V Y A++      G      ++ REM+E+ + P D   F  L+    +
Sbjct: 180 EAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSP-DRITFNTLISAAGR 237

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           +        +   M    I  +   Y  LI  +C+         L++ + +        S
Sbjct: 238 ANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKS-------S 290

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
            ++    +Y+ MI      G   +A   F+++  + V  D + +N ++  H++ GN D A
Sbjct: 291 GIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEA 350

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             I + M   G  +D   Y  L++SY ++G+  +A + L+ M + G SP    + +++++
Sbjct: 351 HSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDA 410

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             + G  + A  + + + + G++ ++ L + +++     G  +EAL  ++ M  +G  PN
Sbjct: 411 YCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPN 470

Query: 554 FDSLLSVLSEKGKTIAAVK 572
             +  S+L   G+    V+
Sbjct: 471 VITYNSLLDAYGRQCLMVR 489



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 112/253 (44%), Gaps = 41/253 (16%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M++I  R+G  + A  I   M + G   D   +  L++SYGK+G  +E++ + + MKQ G
Sbjct: 337 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 396

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              ++ +Y AL     + G +  A   F  +   G++P    Y+ ++ G   +   + A+
Sbjct: 397 ASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEAL 456

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNR--------FKKMD-------------------- 213
              E+M   GI  +V+TYN++++ Y R        F K+                     
Sbjct: 457 ALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQ 516

Query: 214 -------------EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
                         A ++F EM +  ++P V+++++++         +DA  + + M+ F
Sbjct: 517 SLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMRVF 576

Query: 261 DVKPNAVTYTALL 273
           D +   VT+  L+
Sbjct: 577 DGRVYGVTHGLLM 589



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/306 (19%), Positives = 133/306 (43%), Gaps = 14/306 (4%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI  + ++    +A+++ + +   +++ +P   +      YN +I      G    A
Sbjct: 159 YSSLICAYGRSGKLAKAVEIFEAM---KVVCKPNLVV------YNAVIDACSKGGDYPTA 209

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
              FR+++++G+  D + FN LI    +    +    I   M  RG+ RD   Y  LI +
Sbjct: 210 LRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIAT 269

Query: 459 YLRKGEPADAKTALDSMIED-GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
           Y R G+       +++M +  G  P+   + ++++   + G    A  + + M  + V+ 
Sbjct: 270 YCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 329

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLL 574
           +      +++     G+ +EA      M ++G    +  +++LL    ++GK   A+ LL
Sbjct: 330 DGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLL 389

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           +    R    ++ +Y  ++DA    G   +A ++   + + G   D      L+ G  + 
Sbjct: 390 EEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKN 449

Query: 635 GNTKQA 640
           G+  +A
Sbjct: 450 GSPDEA 455


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/623 (22%), Positives = 264/623 (42%), Gaps = 23/623 (3%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAG--LFNHDRETHLKMI 63
           W   L + + +     + +   ++    +N  HA++F  W+      L  H+   H  + 
Sbjct: 58  WAVLLNHDLSSKTLLLNPSYAVSIFQNQQNPSHAIKFHSWLSHVNPTLAAHN-SVHRALR 116

Query: 64  EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
             L R G    +  +L ++   G +  ED+   L+ S+G+ G+   S  +F  +  LG+ 
Sbjct: 117 NTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLS 176

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
            + + Y+AL   +++     +A   F +M ++     R TYN ++ G      ++ A+R 
Sbjct: 177 PTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRL 236

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
              MK +G   +V TY  +I G+    ++DEA  +F  MK+  + P   +   ++ G   
Sbjct: 237 VRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFR 296

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYT----ALLPGLCDAGKMVEVQKVLREMVER--YI 297
                 AL +  E    + +   V +      +L  L +     E+   LR ++ R  Y 
Sbjct: 297 CVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYF 356

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           P   NSVF  ++    K   L    DV + + +  +    G Y  LIE   K E  +   
Sbjct: 357 P--GNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGD 414

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
           ++  +L+   +I            SYN +I   C       A   FR +  +GV+ + V 
Sbjct: 415 RVYGQLISDGLI--------SNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVT 466

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           FN LI GH K+G  D A ++++ +   G+  D   +  +++   +     +A      MI
Sbjct: 467 FNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMI 526

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           E G +P + ++  ++ SL   G V  + ++++ M ++G+  +      +++       VE
Sbjct: 527 EWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVE 586

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           +A    D M +SG  P+   + + +  LSE G+   A K+        C  D      ++
Sbjct: 587 KAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLII 646

Query: 594 DALLAAGKTLNAYSILFKIMEKG 616
             L+       A +I+ +  +KG
Sbjct: 647 KILVQQEYVEEAQNIIERCRQKG 669



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/287 (21%), Positives = 128/287 (44%), Gaps = 1/287 (0%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K+GV+     +  LIE   K    +E  +++  +   G+  +V SY+ +     R     
Sbjct: 387 KQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMD 446

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A   F  M   G+ P   T+N ++ G      ++ A +  E +   G+  D+ T+++++
Sbjct: 447 NASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIV 506

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G  + K+ +EA + F EM E  I P  + Y  +I+    +     ++++   M+   + 
Sbjct: 507 DGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGIS 566

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+  +Y AL+   C   K+ + +K+   M    + P DN  +   +    +SG L  A  
Sbjct: 567 PDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNP-DNYTYSAFIEALSESGRLEEAKK 625

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
           +  +M       ++    ++I+   + E  + A  ++++  +K I L
Sbjct: 626 MFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISL 672



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 109/236 (46%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I    R   +++A     DM  +GV  +   F  LI  + K G + ++ K+ + + + G
Sbjct: 435 IINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENG 494

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++  + ++ ++   + +  R   A   F +M+  GI P    YN+++        +  ++
Sbjct: 495 LKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSV 554

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +    M+  GIS D  +YN +I  + R  K+++A+KLF  M    + P   +Y+  I+  
Sbjct: 555 KLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEAL 614

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
               R ++A ++F  M++    P++     ++  L     + E Q ++    ++ I
Sbjct: 615 SESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGI 670



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 117/247 (47%), Gaps = 1/247 (0%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N++ N    AK  ++A + FR ++  G+   +  T   +I    + G ++ AR +L 
Sbjct: 430 FSYNMIINCFCRAKLMDNASEAFRDMQVRGVV-PNLVTFNTLINGHCKDGAIDKARKLLE 488

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            + + G++ D   F  +++   +    +E+++ F  M + G+  +   Y+ L + +   G
Sbjct: 489 SLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIG 548

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               + +   +M  EGI P  ++YN ++  F    K+E A + F+ M   G++ D  TY+
Sbjct: 549 DVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYS 608

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
             I   +   +++EA+K+F  M+     P       +IK  V  E  ++A  I +  +  
Sbjct: 609 AFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQK 668

Query: 261 DVKPNAV 267
            +  N++
Sbjct: 669 GISLNSI 675



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 29/237 (12%)

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN +I  L  +     A + F+Q+     V D   +N LI G  K G  D A  +V+ M 
Sbjct: 182 YNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMK 241

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            +G   +   Y  LIE +       +A    ++M + G  P  +  R+++  +F   R  
Sbjct: 242 DKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVF---RCV 298

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
             S+             L+L+++ L+        E+   R+  M+        D++L  L
Sbjct: 299 DPSKA------------LELLSEFLDR-------EQEQERVHFMLAC------DTVLYCL 333

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
           +        V  L   LGR       S   V+ A L  G  L     +F+I+ K GV
Sbjct: 334 ANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGV 390


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/555 (23%), Positives = 250/555 (45%), Gaps = 22/555 (3%)

Query: 33  AKNS--EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           A NS  E+A+  F   ++ GL    R  +  +++ L    +    R +  +M   G   +
Sbjct: 190 AANSMLENAVDVFLQAKKTGLELSTRSCNF-LLKCLAEANRREFLRSLFEEMKSTGPPPN 248

Query: 91  EDMFEVLIESYGKKGI------VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
              + +++  Y K          +++ +I + M++ G   +V +Y      + R G    
Sbjct: 249 VFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVES 308

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  +   ++S       + YN ++ G     +L+ A++  E+MKS GIS DV TY+ +I+
Sbjct: 309 ALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIH 368

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G+ +   +++   L  EMK  N+EP+++SY+++  G      +D +L IF ++ +   K 
Sbjct: 369 GFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKY 428

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           +   Y+ L+ G C  G +    K++ EMV   + P D S F  L+   CK G    A + 
Sbjct: 429 DQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAP-DPSNFESLVHGFCKMGLWVNALEF 487

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              M+   I        ++I+  C+    + A+ L++++  + I   P         +YN
Sbjct: 488 FNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIF--PN------LFTYN 539

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I  LC   ++ +A   F  ++K+ VL   V ++ LI G +K+ N   A  +   M + 
Sbjct: 540 AVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKI 599

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           GV  D  AY  LI     +    +A      M E+G +P    + SV+      G ++ A
Sbjct: 600 GVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKA 659

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             +   M+++G    +     +++       ++ A   ID M + G  P+   ++ L++ 
Sbjct: 660 WALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAA 719

Query: 561 LSEKGKTIAAVKLLD 575
              +G    A+++L+
Sbjct: 720 HRRRGNLDKALEMLN 734



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/574 (23%), Positives = 254/574 (44%), Gaps = 22/574 (3%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           ILL+ PK   +    +F++LI+ +    +++ +V +F   K+ G+E S +S + L K + 
Sbjct: 167 ILLESPKDAAR-SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLA 225

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVML----WGFFLSLKLET--AIRFFEDMKSRG 191
              R    +  F +M S G  P   TY +M+     G F    ++T  A    E+M+  G
Sbjct: 226 EANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNG 285

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
            S  VVTY+T I G  R   ++ A      +   N    V  Y  +I G       D+AL
Sbjct: 286 ESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEAL 345

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           ++ +EMKS  + P+  TY+ L+ G C  G + +   ++ EM    + P   S +  L   
Sbjct: 346 KVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVS-YSSLFHG 404

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK    + + D+ + +       +   Y ILI+ FC     D A KL++++V   +   
Sbjct: 405 LCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPD 464

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN-LIRGHSKEGNP 430
           P        S++  ++   C  G    A  FF  +++ G+L  +A  N +I  H +EG  
Sbjct: 465 P--------SNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRV 516

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           + A  ++  M  +G+  +   Y  +I    ++ +   A      M++    P+  ++ ++
Sbjct: 517 EEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTL 576

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           ++   +    Q A  +   M++ GV  ++     ++  L  R  + EA      M ++G 
Sbjct: 577 IDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGM 636

Query: 551 VPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
            P+   + S+++     G    A  L +  L R  +  + +Y  ++D      + ++   
Sbjct: 637 TPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNR-IDIAD 695

Query: 608 ILFKIMEKGGVT-DWKSSDKLIAGLNQEGNTKQA 640
           +L   M++ G+T D  + + LIA   + GN  +A
Sbjct: 696 MLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKA 729



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 129/564 (22%), Positives = 240/564 (42%), Gaps = 39/564 (6%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR-------YFNKMLSEGIE- 158
           V   +K    MK+ G  RS+ ++  +  ++   G +M           Y+NK+  +  E 
Sbjct: 105 VARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFEL 164

Query: 159 -------PTRHTYNVMLWGFFLSL-----KLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                  P     +V+++   + +      LE A+  F   K  G+ L   + N ++   
Sbjct: 165 FPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCL 224

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA--VERAD----DALRIFDEMKSF 260
               + +    LF EMK     P V +YT M+  Y       AD     A  I +EM+  
Sbjct: 225 AEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERN 284

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P  VTY+  + GLC  G +      +R ++       +   +  ++   CK G L+ 
Sbjct: 285 GESPTVVTYSTYIYGLCRVGYVESALDFVRSLISAN-GLVNVYCYNAIIHGLCKKGELDE 343

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  VL+ M    I  +   Y ILI  FCK    ++ + L++++          S ++   
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEM--------KYSNMEPSL 395

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            SY+ +   LC    +  +   FR L   G   D  A++ LI+G   +G+ DSA ++++ 
Sbjct: 396 VSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEE 455

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M R  +  D   +  L+  + + G   +A    + M+E G  P+ +    ++++   +GR
Sbjct: 456 MVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGR 515

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           V+ A  +M  M  +G+  NL     ++  L      E AL    LM++   +P+   + +
Sbjct: 516 VEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYST 575

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L+   +++  +  A+ L    L      D+ +Y  +++ L    +   AY++  K+ E G
Sbjct: 576 LIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENG 635

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQA 640
              D  S   +IAG  + G+ ++A
Sbjct: 636 MTPDKISYTSVIAGFCRIGDMRKA 659



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 210/448 (46%), Gaps = 13/448 (2%)

Query: 37  EHALQFFRWVERA-GLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           E AL F R +  A GL N     +  +I  L + G+L+ A  +L +M   G+  D   + 
Sbjct: 307 ESALDFVRSLISANGLVN--VYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYS 364

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           +LI  + K+G V++ + + + MK   +E S+ SY +LF  + ++    ++   F  + + 
Sbjct: 365 ILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAA 424

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G +  +  Y++++ GF +   L++A +  E+M    ++ D   + ++++G+ +      A
Sbjct: 425 GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            + F  M E  I P++ +   +I  +    R ++AL + +EM++  + PN  TY A++  
Sbjct: 485 LEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINR 544

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC   K     ++   M++R + P    V+  L+    K  +   A  +   M+++ +  
Sbjct: 545 LCKERKSERALELFPLMLKRNVLP-SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTP 603

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   Y ILI   C       A  L  K+ E        + +  +  SY  +I   C  G 
Sbjct: 604 DMVAYTILINILCHRSRMCEAYNLFKKMTE--------NGMTPDKISYTSVIAGFCRIGD 655

Query: 396 TGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             KA   F +++++G L   V + +L+ G+ K    D A  ++  M R+G+  D   Y  
Sbjct: 656 MRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNV 715

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSP 482
           LI ++ R+G    A   L+ M E+G  P
Sbjct: 716 LIAAHRRRGNLDKALEMLNEMKENGVLP 743



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 166/335 (49%), Gaps = 4/335 (1%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           S+ +L  FR +  AG + +D+  +  +I+     G L+ A  ++ +M +  +  D   FE
Sbjct: 411 SDISLDIFRDLGAAG-YKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFE 469

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            L+  + K G+   +++ F++M + G+  S+ + + +     R GR   A    N+M ++
Sbjct: 470 SLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQ 529

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           GI P   TYN ++       K E A+  F  M  R +   VV Y+T+I+G+ +     +A
Sbjct: 530 GIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKA 589

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             L+A M +  + P +++YT +I       R  +A  +F +M    + P+ ++YT+++ G
Sbjct: 590 LMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAG 649

Query: 276 LCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
            C  G M +   +  EM++R ++P      +  L+   CK   ++ A  ++  M R  I 
Sbjct: 650 FCRIGDMRKAWALFNEMLQRGHLPTV--VTYTSLVDGYCKMNRIDIADMLIDEMKRKGIT 707

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
            +   Y +LI    +    D+A+++L+++ E  ++
Sbjct: 708 PDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVL 742



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 1/236 (0%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E AL     ++  G+F  +  T+  +I  L +  K   A  +   M K+ V     ++  
Sbjct: 517 EEALNLMNEMQTQGIF-PNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYST 575

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           LI+ + K+   Q+++ ++  M ++GV   + +Y  L  ++  R R   A   F KM   G
Sbjct: 576 LIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENG 635

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P + +Y  ++ GF     +  A   F +M  RG    VVTY ++++GY +  ++D A+
Sbjct: 636 MTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIAD 695

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            L  EMK K I P V++Y  +I  +      D AL + +EMK   V P+ +TY  L
Sbjct: 696 MLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 213/458 (46%), Gaps = 16/458 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           ++  +++ L R GK++ A   + +M ++ +  D   + V+I++  K   +  +++ F+ M
Sbjct: 12  SYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM 71

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
                E  V +Y+ L   + + GR   A   F  M   GI P+  TY  ++  F    + 
Sbjct: 72  P----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQF 127

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           ETA    + M SR  S  V +Y ++ING  + +K+D+A +LF EMK    +P  ++Y T+
Sbjct: 128 ETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL 187

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G    +R  +A  +   M     +P+ +T+TAL+ GLC   ++ E   + + M ++  
Sbjct: 188 IHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGC 247

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D      L+   C    L  A  V++     + P     Y  +     +   +DRA 
Sbjct: 248 AP-DLVTHTVLVSKLCIRRKLRPALSVVRNYP--ACPEAVILYTPIFRELGRRRGFDRAA 304

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           +LL K+  + +             +Y    + L    +  +A   FR+++++G+  D VA
Sbjct: 305 RLLQKMARRGVA--------PNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVA 356

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N L+ G  K    D A ++V+ M + G+P +   Y  L+  + RKG+       L +M+
Sbjct: 357 YNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 416

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
             G  P  + + +++  LF  G+V  A   +   + +G
Sbjct: 417 SRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/442 (21%), Positives = 183/442 (41%), Gaps = 48/442 (10%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           ++A +T  +     LVP  F +N+V + L  A+    A++FF  +        D  T+  
Sbjct: 27  DKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP-----DVVTYNT 81

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L + G++  A  +   M   G+   +  +  LI+ + K    + +  +  +M    
Sbjct: 82  LLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRK 141

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +V SY ++   + +  +   A + F +M   G +P R TYN ++ G  +  +L  A 
Sbjct: 142 CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAK 201

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT------ 235
                M       D +T+  +I G     ++ EA  LF  M ++   P ++++T      
Sbjct: 202 DLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKL 261

Query: 236 ----------TMIKGYVAVERA-----------------DDALRIFDEMKSFDVKPNAVT 268
                     ++++ Y A   A                 D A R+  +M    V PN VT
Sbjct: 262 CIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVT 321

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           YTA   GL D  + +   +  R M+E+ I P D   +  L+   CK+  L+ A  +++ M
Sbjct: 322 YTAFFKGLGDWKEGMRAYREFRRMLEQGIEP-DMVAYNVLVDGFCKANRLDMAEKMVRYM 380

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
            +  +P     Y  L+ + C+    +   +LL  +V +    +P      + ++++ ++ 
Sbjct: 381 DQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRG--RQP------DVATWSTLVA 432

Query: 389 HLCHNGQTGKAEIFFRQLMKKG 410
            L   GQ   A  F    M +G
Sbjct: 433 GLFRVGQVDAAYSFLNLAMSQG 454



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/471 (22%), Positives = 183/471 (38%), Gaps = 55/471 (11%)

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
           F +D K   +S     Y  ++    R  K+D+A    AEM  + + P V +Y  +I    
Sbjct: 2   FSQDCKPNALS-----YCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLC 56

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              R   A+  F+ M     +P+ VTY  LL GLC  G++ +   +   M    I P D 
Sbjct: 57  KARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV 112

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           + +  L+ V CK      A  +L+ M           Y  +I   CK    D+A +L ++
Sbjct: 113 T-YTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEE 171

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
           +  K    +P         +YN +I  LC   +  +A+     +++     D + F  LI
Sbjct: 172 M--KLAGCKPDRV------TYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALI 223

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL--RKGEPA------------- 466
            G         AF + + M ++G   D   +  L+      RK  PA             
Sbjct: 224 EGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEA 283

Query: 467 ------------------DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
                              A   L  M   G +P    + +  + L +      A R  +
Sbjct: 284 VILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFR 343

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
            M+E+G++ ++     +++       ++ A   +  M QSG  PN   +++L+     KG
Sbjct: 344 RMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKG 403

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           K  A  +LL   + R    D+A++  ++  L   G+   AYS L   M +G
Sbjct: 404 KVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 85/426 (19%), Positives = 159/426 (37%), Gaps = 51/426 (11%)

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
            ++ +P  +SY  ++K      + D A     EM    + P+  TY  ++  LC A ++ 
Sbjct: 3   SQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRIS 62

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
              +    M     P  D   +  LLG  CK+G +  A  +  +M    I      Y  L
Sbjct: 63  RAIEFFETM-----PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 117

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I+ FCK   ++ A  LL  +  ++                +P +   C            
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKC---------------SPTVYSYC------------ 150

Query: 404 RQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
                          ++I G  K    D A+++ + M   G   D   Y  LI     K 
Sbjct: 151 ---------------SIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQ 195

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              +AK  L  M+E+   P    F +++E L    R++ A  + + M ++G   +L    
Sbjct: 196 RLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHT 255

Query: 524 KILEALLMRGHVEEALGRI-DLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
            ++  L +R  +  AL  + +      +V  +  +   L  +     A +LL     R  
Sbjct: 256 VLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGV 315

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADI 642
             ++ +Y      L    + + AY    +++E+G   D  + + L+ G  +     + D+
Sbjct: 316 APNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCK---ANRLDM 372

Query: 643 LSRMIR 648
             +M+R
Sbjct: 373 AEKMVR 378


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 225/486 (46%), Gaps = 41/486 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  LGR+G+ + A+ I       G   +  ++  LI +YG+ G + ++V+IF+ MK + 
Sbjct: 126 IISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV- 184

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + ++  Y+A+     + G Y  A R F +ML +G+ P R T+N ++     + + E   
Sbjct: 185 CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECD 244

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKG 240
           R F +M+ RGI+ D VTYNT+I  Y R  +M     L   M K   IEP+VI+Y+TMI G
Sbjct: 245 RIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDG 304

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y  +  A +A+ +F EM++ +V+P+ + Y  ++      G   E   + R M E     K
Sbjct: 305 YAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGF-AK 363

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  LL    K G    A  +L+ M +         Y  LI+ +CK   +  A+ L 
Sbjct: 364 DIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALF 423

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
             +  K+  L+P   L      Y+ ++   C NG   +A     ++   G+  + + +N+
Sbjct: 424 QDV--KKAGLQPDVVL------YSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNS 475

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+  + ++           +M R+  P+     +  +   L+            SM +D 
Sbjct: 476 LLDAYGRQC----------LMVRKTFPKLRFFLLPRVTMLLKP-----------SMQDDQ 514

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
                   +S+++   +   V  A+RV + M + GVK N+   + IL A      VE+A 
Sbjct: 515 --------QSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDAS 566

Query: 540 GRIDLM 545
             ++ M
Sbjct: 567 NLLEAM 572



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 110/489 (22%), Positives = 200/489 (40%), Gaps = 55/489 (11%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V +      +   AL+ FR +   G+ + DR T   +I   GR  +      I  +M
Sbjct: 192 YNAVIDACSKGGDYPTALRIFREMLEQGM-SPDRITFNTLISAAGRANRWEECDRIFAEM 250

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGR 141
            ++G+  D+  +  LI +Y + G +     + + M K  G+E SV +Y  +     + G 
Sbjct: 251 EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGL 310

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F +M ++ +EP    YN M+         + A      M+  G + D+VTYN 
Sbjct: 311 AHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNA 370

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++ Y +  K  EA  L  EMK++   P +++Y+ +I  Y       DA+ +F ++K   
Sbjct: 371 LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAG 430

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQCKSGHLN 319
           ++P+ V Y+ L+ G C  G   E   +L EM +  I P     +  +   G QC      
Sbjct: 431 LQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQC------ 484

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
                   M+R + P         +    K  M D    L+D   ++ ++L         
Sbjct: 485 -------LMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVL--------- 528

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
                              A   FR++ K GV  + V F++++   S   + + A  +++
Sbjct: 529 ------------------AAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLE 570

Query: 439 IMGRRGVPRDADAYICLIESYLRKG----EPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            M      R  D  +  +   L  G       DA+T  + +   GH+ A + + ++ + L
Sbjct: 571 AM------RVFDGRVYGVTHGLLMGFRIRVWRDAETLFNELTTLGHNTAVAFYNALTDVL 624

Query: 495 FEDGRVQTA 503
           +   + Q A
Sbjct: 625 WHFEQAQAA 633



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 170/379 (44%), Gaps = 11/379 (2%)

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D VT +T+I+   R  + D A+ +F           V  Y+++I  Y    +   A+ IF
Sbjct: 120 DKVT-STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIF 178

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           + MK    KPN V Y A++      G      ++ REM+E+ + P D   F  L+    +
Sbjct: 179 EAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSP-DRITFNTLISAAGR 236

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           +        +   M    I  +   Y  LI  +C+         L++ + +        S
Sbjct: 237 ANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKS-------S 289

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
            ++    +Y+ MI      G   +A   F+++  + V  D + +N ++  H++ GN D A
Sbjct: 290 GIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEA 349

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             I + M   G  +D   Y  L++SY ++G+  +A + L+ M + G SP    + +++++
Sbjct: 350 HSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDA 409

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             + G  + A  + + + + G++ ++ L + +++     G  +EAL  ++ M  +G  PN
Sbjct: 410 YCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPN 469

Query: 554 FDSLLSVLSEKGKTIAAVK 572
             +  S+L   G+    V+
Sbjct: 470 VITYNSLLDAYGRQCLMVR 488



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/306 (19%), Positives = 133/306 (43%), Gaps = 14/306 (4%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  LI  + ++    +A+++ + +   +++ +P   +      YN +I      G    A
Sbjct: 158 YSSLICAYGRSGKLAKAVEIFEAM---KVVCKPNLVV------YNAVIDACSKGGDYPTA 208

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
              FR+++++G+  D + FN LI    +    +    I   M  RG+ RD   Y  LI +
Sbjct: 209 LRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIAT 268

Query: 459 YLRKGEPADAKTALDSMIED-GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
           Y R G+       +++M +  G  P+   + ++++   + G    A  + + M  + V+ 
Sbjct: 269 YCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 328

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLL 574
           +      +++     G+ +EA      M ++G    +  +++LL    ++GK   A+ LL
Sbjct: 329 DGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLL 388

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           +    R    ++ +Y  ++DA    G   +A ++   + + G   D      L+ G  + 
Sbjct: 389 EEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKN 448

Query: 635 GNTKQA 640
           G+  +A
Sbjct: 449 GSPDEA 454


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 186/398 (46%), Gaps = 11/398 (2%)

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
           +P    YN ++ GF  + ++E+A    + MK +G S DVVT+N MI  +    K+D A K
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100

Query: 218 LFAEM-KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +F E+ K+ N +PT+I+YT +I+ Y+     D+AL++ DEM S  ++P+  TY  +  GL
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  GK+    + +R +  R   P D   +  LL      G  +     +  +        
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKP-DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPN 219

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y ILI + C+    + ++ L+  + EK   L P      +A  Y+P+I   C  G+ 
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKG--LTP------DAYCYDPLIAAFCREGKL 271

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A  F   ++  G L D V +N ++    K GN D A EI   +   G P +  +Y  +
Sbjct: 272 DMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTM 331

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           + +    G+   A   +  M+  G  P    + S++  L  DG V  A  ++  M+    
Sbjct: 332 LSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRF 391

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           + N+     +L  L     +++A+  +  M+++G  PN
Sbjct: 392 QPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPN 429



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 205/460 (44%), Gaps = 12/460 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  K  Q D  +   LI+ +     + ++ ++  I+++ G +  V +Y+A+     +  R
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED-MKSRGISLDVVTYN 200
              AK   ++M  +G  P   T+N+M+  F    K++ A++ FE+ +K       ++TY 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I  Y     +DEA KL  EM  + +EP   +Y  + +G     + D A      + S 
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
             KP+ +TY  LL  L + GK  E +K + E+  R   P +   +  L+   C+ G +  
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEP-NVVTYSILISSLCRDGKIEE 238

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           + +++K M    +  +A  Y  LI  FC+    D AI+ LD ++    +         + 
Sbjct: 239 SVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFL--------PDI 290

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKI 439
            +YN ++  LC NG    A   F +L + G    V ++N ++      G+   A  ++  
Sbjct: 291 VNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQ 350

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  +G+  D   Y  LI    R G   +A   L  M+     P    +++V+  L +  R
Sbjct: 351 MLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHR 410

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           +  A  V+ +M+E G + N      ++E +   G   +A+
Sbjct: 411 IDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAM 450



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 212/465 (45%), Gaps = 27/465 (5%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M ++    DV+    +I G+   + +D+A ++   + EK+ +P V +Y  +I G+    R
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGIL-EKHGKPDVFAYNAVISGFCKANR 59

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-- 304
            + A  + D MK     P+ VT+  ++   C  GK+    KV  E++      KDN+   
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELL------KDNNCKP 113

Query: 305 ----FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
               +  L+      G ++ A  +L  M+   +  +   Y ++    CK    DRA + +
Sbjct: 114 TLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFV 173

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFN 418
             L  +    +P      +  +YN +++ L + G+  + E +  ++  +G  +P  V ++
Sbjct: 174 RTLNSRG--CKP------DVITYNILLRALLNQGKWDEGEKWMSEIFSRGC-EPNVVTYS 224

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            LI    ++G  + +  +VK+M  +G+  DA  Y  LI ++ R+G+   A   LD MI D
Sbjct: 225 ILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICD 284

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P    + ++M +L ++G    A  +   + E G   N+     +L AL   G    A
Sbjct: 285 GFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRA 344

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           LG I  M+  G  P+   ++SL+S L   G    A+ LL   L      ++ SY+ VL  
Sbjct: 345 LGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLG 404

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           L  A +  +A  +L  ++E G   +  +   LI G+   G+  QA
Sbjct: 405 LCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQA 449



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/447 (23%), Positives = 202/447 (45%), Gaps = 17/447 (3%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           ++N + A +    +E+ G    D   +  +I    +  ++  A+ +L  M +KG   D  
Sbjct: 23  SRNIDKATRVMGILEKHG--KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVV 80

Query: 93  MFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
              ++I ++  KG +  ++K+F +++K    + ++ +Y  L +  +  G    A +  ++
Sbjct: 81  THNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDE 140

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           MLS G+EP   TYNV+  G     K++ A  F   + SRG   DV+TYN ++       K
Sbjct: 141 MLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGK 200

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
            DE EK  +E+  +  EP V++Y+ +I       + ++++ +   MK   + P+A  Y  
Sbjct: 201 WDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDP 260

Query: 272 LLPGLCDAGKMVEVQKVLREMV-ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           L+   C  GK+    + L  M+ + ++P   N  +  ++   CK+G+ + A ++   +  
Sbjct: 261 LIAAFCREGKLDMAIEFLDCMICDGFLPDIVN--YNTIMAALCKNGNGDHAVEIFGKLDE 318

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
           +  P     Y  ++     +    RA+ ++ +++ K I        D +  +YN +I  L
Sbjct: 319 VGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGI--------DPDVITYNSLISCL 370

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           C +G   +A I     M  G   P  V++  ++ G  K    D A E++  M   G   +
Sbjct: 371 CRDGMVDEA-IGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPN 429

Query: 449 ADAYICLIESYLRKGEPADAKTALDSM 475
              Y  LIE     G    A    +S+
Sbjct: 430 ETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 194/434 (44%), Gaps = 51/434 (11%)

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M  K+ +P VI  T +IKG+      D A R+   ++    KP+   Y A++ G C A +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI--PTEAGH 339
           +   + VL  M  +   P D      ++G  C  G ++ A  V + +++ +   PT    
Sbjct: 60  IESAKTVLDRMKRKGFSP-DVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLI-T 117

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y ILIE +      D A+KLLD+++ +   L P                           
Sbjct: 118 YTILIEAYILEGGIDEALKLLDEMLSRG--LEP--------------------------- 148

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
                        D   +N + RG  KEG  D AFE V+ +  RG   D   Y  L+ + 
Sbjct: 149 -------------DTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRAL 195

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
           L +G+  + +  +  +   G  P    +  ++ SL  DG+++ +  ++K M EKG+  + 
Sbjct: 196 LNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDA 255

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDF 576
                ++ A    G ++ A+  +D M+  G +P   N++++++ L + G    AV++   
Sbjct: 256 YCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGK 315

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
                C  +++SY  +L AL ++G    A  ++ +++ KG   D  + + LI+ L ++G 
Sbjct: 316 LDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGM 375

Query: 637 TKQA-DILSRMIRG 649
             +A  +L+ M+ G
Sbjct: 376 VDEAIGLLADMLSG 389



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/377 (21%), Positives = 169/377 (44%), Gaps = 9/377 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           HN++     G    + AL+ F  + +         T+  +IE     G ++ A  +L +M
Sbjct: 82  HNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEM 141

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G++ D   + V+     K+G V  + +    +   G +  V +Y+ L + +L +G++
Sbjct: 142 LSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKW 201

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              +++ +++ S G EP   TY++++       K+E ++   + MK +G++ D   Y+ +
Sbjct: 202 DEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPL 261

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  + R  K+D A +    M      P +++Y T++         D A+ IF ++     
Sbjct: 262 IAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGC 321

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN  +Y  +L  L  +G       ++ +M+ + I P D   +  L+   C+ G ++ A 
Sbjct: 322 PPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDP-DVITYNSLISCLCRDGMVDEAI 380

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +L  M+          Y  ++   CKA   D AI++L  ++E     +P  T      +
Sbjct: 381 GLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENG--CQPNET------T 432

Query: 383 YNPMIQHLCHNGQTGKA 399
           Y  +I+ +  +G   +A
Sbjct: 433 YTLLIEGIGFSGSRTQA 449


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 149/624 (23%), Positives = 278/624 (44%), Gaps = 55/624 (8%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++  L + G    A   +  + K G   D  +   L+  + +   +++++K+FD+M + G
Sbjct: 201 IVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREG 260

Query: 122 V--ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
                SV SY  L   +   GR   A    ++M  +G +P+  TY V++        ++ 
Sbjct: 261 TCAPNSV-SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 319

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A   F++M +RG   +V TY  +I+G  R  K++EA  +  +M +  I P+VI+Y  +I 
Sbjct: 320 AFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALIN 379

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY    R   A  +   M+    KPN  T+  L+ GLC  GK  +   +L+ M++  + P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D   +  L+   C+ GH+N A  +L +M    +  +   +  +I  FCK    D A   
Sbjct: 440 -DIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAF 498

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
           L  ++ K I         ++  +   +I  +C+ G+T  A      L+K  +L  P + N
Sbjct: 499 LGLMLRKGI--------SLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLN 550

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            ++   SK         ++  + + G+      Y  L++  +R G+ + +   L+ M   
Sbjct: 551 VILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLS 610

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P    +  ++  L + GRV+ A +++ +M + GV  N      +++  +  G ++ A
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670

Query: 539 LGRIDLMMQSGSVPN---FDSLLS--VLSEKG----------KTIAAVK--------LLD 575
           L  +  M++ G   N   + SLL   VLS+KG          + I+ V+        L  
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCI 730

Query: 576 FCLGRDC--------------IIDLASY-EKVLDALL----AAGKTLNAYSILFKIMEKG 616
           F + R C              I+    + EK +D ++    +  K      ++  +++ G
Sbjct: 731 FLVTRLCKEGRTDESNGLVQTILKSGVFLEKAIDIIMESYCSKKKHTKCVELITLVLKSG 790

Query: 617 GVTDWKSSDKLIAGLNQEGNTKQA 640
            V  +KS   +I GL +EG+T++A
Sbjct: 791 FVPSFKSFCLVIQGLKKEGDTERA 814



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 143/622 (22%), Positives = 279/622 (44%), Gaps = 47/622 (7%)

Query: 21  FDHNLVYNVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
            D ++V ++L G     N   AL+ F  + R G    +  ++  +I  L  VG+L  A  
Sbjct: 228 LDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFG 287

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +   M +KG Q     + VLI++   +G++ ++  +FD M   G + +V +Y  L   + 
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLC 347

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G+   A     KM+ +GI P+  TYN ++ G+    ++  A      M+ R    +V 
Sbjct: 348 RDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           T+N ++ G  R  K  +A  L   M +  + P ++SY  +I G       + A ++   M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSM 467

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            SFD++P+ +T+TA++   C  GK       L  M+ + I   D      L+   C  G 
Sbjct: 468 NSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI-SLDEVTGTTLIDGVCNVGK 526

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII--LRPQST 375
              A  +L+ ++++ + T      ++++   K       + +L K+ +  ++  +   +T
Sbjct: 527 TRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTT 586

Query: 376 L--------DMEAS-----------------SYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
           L        D+  S                  Y  +I  LC  G+  +AE     +   G
Sbjct: 587 LVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY------LRKG 463
           V  + V +  +++G+   G  D A E V+ M  RG   +   Y  L+  +      +R+ 
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRET 706

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV--KENLDL 521
           +P   K  L S++E      S L   ++  L ++GR   ++ +++++++ GV  ++ +D+
Sbjct: 707 DPECIK-ELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAIDI 765

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV---LSEKGKTIAAVKLLDFCL 578
              I+E+   +    + +  I L+++SG VP+F S   V   L ++G T  A +L+   L
Sbjct: 766 ---IMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELL 822

Query: 579 GRDCIIDLASYEKVLDALLAAG 600
             + +++ +     ++ L+  G
Sbjct: 823 TSNGVVEKSGVLPYVECLMETG 844



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/458 (22%), Positives = 198/458 (43%), Gaps = 49/458 (10%)

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           +  M++ G  + ++ Y T++N   +    + AE    ++ +          T+++ G+  
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCR 242

Query: 244 VERADDALRIFDEM-KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                DAL++FD M +     PN+V+Y+ L+ GLC+ G++ E   +  +M E+   P   
Sbjct: 243 GLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           +                                    Y +LI+  C   + D+A  L D+
Sbjct: 303 T------------------------------------YTVLIKALCDRGLIDKAFNLFDE 326

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLI 421
           ++ +    +P         +Y  +I  LC +G+  +A    R+++K G+   V  +N LI
Sbjct: 327 MIARGC--KPN------VHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALI 378

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G+ K+G    AFE++ +M +R    +   +  L+E   R G+P  A   L  M+++G S
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P    +  +++ L  +G +  A +++ SM    ++ +      I+ A   +G  + A   
Sbjct: 439 PDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAF 498

Query: 542 IDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
           + LM++ G         +L+  +   GKT  A+ +L+  +    +    S   +LD L  
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSK 558

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
             K     ++L KI + G V    +   L+ GL + G+
Sbjct: 559 GCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 130/263 (49%), Gaps = 5/263 (1%)

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  ++  LC NG T  AE+F  +++K G +LD     +L+ G  +  N   A ++  +M 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257

Query: 442 RRG-VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
           R G    ++ +Y  LI      G   +A    D M E G  P++  +  ++++L + G +
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A  +   M+ +G K N+     +++ L   G +EEA G    M++ G  P+   +++L
Sbjct: 318 DKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNAL 377

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           ++   + G+ + A +LL     R C  ++ ++ ++++ L   GK   A  +L ++++ G 
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA 640
             D  S + LI GL +EG+   A
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNVA 460



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 153/344 (44%), Gaps = 19/344 (5%)

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  ++   CK+G+  AA   +  ++++    ++     L+  FC+      A+K+ D L+
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFD-LM 256

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRG 423
            +E    P S       SY+ +I  LC  G+  +A     Q+ +KG       +  LI+ 
Sbjct: 257 SREGTCAPNSV------SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA 310

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
               G  D AF +   M  RG   +   Y  LI+   R G+  +A      M++DG  P+
Sbjct: 311 LCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPS 370

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + +++    +DGRV  A  ++  M ++  K N+    +++E L   G   +A+  + 
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL----DFCLGRDCIIDLASYEKVLDAL 596
            M+ +G  P+   ++ L+  L  +G    A KLL     F L  DC+    ++  +++A 
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCL----TFTAIINAF 486

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              GK   A + L  ++ KG   D  +   LI G+   G T+ A
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDA 530



 Score = 43.1 bits (100), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 78/163 (47%), Gaps = 4/163 (2%)

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           +R+++ +L ++G  + A   M  +++ G   +  +V  +L       ++ +AL   DLM 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257

Query: 547 QSGSV-PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           + G+  PN   +  L+  L E G+   A  L D    + C     +Y  ++ AL   G  
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
             A+++  +++ +G   +  +   LI GL ++G  ++A+ + R
Sbjct: 318 DKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCR 360


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 198/427 (46%), Gaps = 10/427 (2%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  +  T+  +I  L +VG  + A  +L  M +   Q D  ++  +I+S  K   V ++ 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            +F  M   G+  S+ +Y++L   +     +       N+M++  I P    ++ ++   
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               K+  A    + M  RG+  +VVTYN +++G+    +MDEA K+F  M  K   P V
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           +SY+T+I GY  ++R + A+ +F+EM   ++ PN VTY+ L+ GLC  G++ +   +  E
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           MV R   P D   +  LL   CK+  L+ A  +LKA+   ++  +   Y I+I+  C+A 
Sbjct: 400 MVTRGQIP-DFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 458

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             + A  L   L  K   L P         +Y  MI  LC  G   +A   F ++ +KG 
Sbjct: 459 ELEAARDLFSNLSSKG--LHPN------VWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             +   +N + RG  +        ++++ M  RG   D      L+E     G     K 
Sbjct: 511 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQ 570

Query: 471 ALDSMIE 477
            L   ++
Sbjct: 571 ILSEFLQ 577



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 207/459 (45%), Gaps = 13/459 (2%)

Query: 64  EILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           ++L  + K+ H   +L     M   G+  +     +LI S+     +  +  +   + +L
Sbjct: 64  KLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKL 123

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G + ++ +++ L + +   G+       F+KM+ EG +P   TY  ++ G         A
Sbjct: 124 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 183

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           IR    M+      DVV Y ++I+   + +++ +A  LF+EM  + I P++ +Y ++I  
Sbjct: 184 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHA 243

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              +        + +EM +  + PN V ++ ++  LC  GK++E   V+  M++R + P 
Sbjct: 244 LCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP- 302

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   +  L+   C    ++ A  V   M+      +   Y  LI  +CK +  ++A+ L 
Sbjct: 303 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 362

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNN 419
           +++  KE+I  P +       +Y+ ++  LCH G+   A   F +++ +G + D V++  
Sbjct: 363 EEMCRKELI--PNTV------TYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 414

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+    K    D A  ++K +    +  D   Y  +I+   R GE   A+    ++   G
Sbjct: 415 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 474

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             P    +  ++  L + G +  AS++   M  KG   N
Sbjct: 475 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 513



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/509 (21%), Positives = 215/509 (42%), Gaps = 52/509 (10%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML     P+   +  +L          T +     M S GI  ++ T N +IN +  
Sbjct: 47  FNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCH 106

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
            +++  A  + A++ +   +P + ++ T+I+G     +  + L +FD+M     +PN VT
Sbjct: 107 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 166

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ GL                                    CK G  +AA  +L++M
Sbjct: 167 YGTLINGL------------------------------------CKVGSTSAAIRLLRSM 190

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
            + +   +   Y  +I++ CK     +A  L  +++ + I             +YN +I 
Sbjct: 191 EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGI--------SPSIFTYNSLIH 242

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC+  +         +++   ++ + V F+ ++    KEG    A ++V +M +RGV  
Sbjct: 243 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +   Y  L++ +  + E  +A    D+M+  G +P    + +++    +  R++ A  + 
Sbjct: 303 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 362

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEK 564
           + M  K +  N    + ++  L   G +++A+     M+  G +P+F S   LL  L + 
Sbjct: 363 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 422

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
            +   A+ LL    G +   D+  Y  V+D +  AG+   A  +   +  KG   +  + 
Sbjct: 423 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 482

Query: 625 DKLIAGLNQEGNTKQADILSRMIRGEMSR 653
             +I GL Q+G   +A  L     GEM R
Sbjct: 483 TIMINGLCQQGLLAEASKL----FGEMKR 507


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 136/594 (22%), Positives = 253/594 (42%), Gaps = 66/594 (11%)

Query: 30  LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
           L  A+  E  L   R ++  G     R  +  +++   R  K   A  +L +M +KG+  
Sbjct: 86  LCNAERGEEGLLMLRRMKELGWRPSTR-AYAAVVDFRCRERKAKEAEEMLQEMFEKGLAP 144

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
                  +I +Y K+G + +++++ ++MK  G + +V +Y+AL +     G+   A    
Sbjct: 145 CVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLL 204

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
           NKM + G+ P   TYN+++ G  +   +E+A R    M+  G+  D  TYN +IN   + 
Sbjct: 205 NKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKD 264

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
            + D+A  LF  ++ + I+P  +++ ++I G     +AD A +  ++M S    P+  TY
Sbjct: 265 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTY 324

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           ++ +  LC      E    + EM+++ + P                              
Sbjct: 325 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS----------------------------- 355

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
                    +Y I+I    K   Y    +   ++V         S  + +  +Y   ++ 
Sbjct: 356 -------TVNYTIVIHKLLKERNYGLVARTWGEMV--------SSGCNPDVVTYTTSMRA 400

Query: 390 LCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-RGVPR 447
            C  G+  +AE    ++ K GV +D +A+N L+ GH+  G  D A  I+K M     VP 
Sbjct: 401 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 460

Query: 448 DADAYIC--------LIESYL--------RKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
               +I         L+E  L        +  E  D     D M ++   P S  + S++
Sbjct: 461 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSIL 520

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           E   EDGR + A+ ++  M E  +  N D+   ++          +A   +  M+Q G +
Sbjct: 521 EGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFI 580

Query: 552 P---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           P   ++  LLS L  +G+T  A ++      +D   D   ++ ++D L+  G +
Sbjct: 581 PQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHS 634



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 150/615 (24%), Positives = 255/615 (41%), Gaps = 69/615 (11%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G + D   F  LI  Y +   V  +  +FD M   G  + V SY  L + +   GR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F +M     +P  H Y  ++ G   + + E  +     MK  G       Y  
Sbjct: 61  IDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++   R +K  EAE++  EM EK + P V++ T +I  Y    R  DALR+ + MK   
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            KPN  TY AL+ G C+ GK+ +   +L +M    + P D   +  L+  QC  GH+ +A
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNP-DAVTYNLLIRGQCIDGHIESA 235

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             +L+ M    +  +   Y  LI   CK    D+A  L D L  + I  +P       A 
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGI--KPN------AV 287

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG-----HSKEG------- 428
           ++N +I  LC +G+   A  F  +++  G   D   +++ I        S+EG       
Sbjct: 288 TFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEM 347

Query: 429 -----NPDSA-FEIV--KIMGRR---------------GVPRDADAYICLIESYLRKGEP 465
                 P +  + IV  K++  R               G   D   Y   + +Y  +G  
Sbjct: 348 LQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRL 407

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            +A+  L  M ++G +  +  + ++M+     G+   A  ++K M       N      +
Sbjct: 408 NEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFIL 467

Query: 526 LEALLMRGHVEEAL-----------------GRIDLMMQSGSVPN---FDSLLSVLSEKG 565
           L  L+    VE+ L                 G  D+M ++  +PN   + S+L   SE G
Sbjct: 468 LRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDG 527

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +T  A  L+         ++   Y  ++     + + L+A+ ++  +++ G +    S  
Sbjct: 528 RTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQ 587

Query: 626 KLIAGLNQEGNTKQA 640
            L++GL  EG T +A
Sbjct: 588 HLLSGLICEGQTDKA 602



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 197/471 (41%), Gaps = 35/471 (7%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAK----NSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           L NK+RA     D  + YN+L   +    + E A +  R +E  GL   D+ T+  +I  
Sbjct: 203 LLNKMRACGVNPDA-VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI-ADQYTYNALINA 260

Query: 66  LGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           L + G+ + A C L D +  +G++ +   F  LI    K G    + K  + M   G   
Sbjct: 261 LCKDGRTDQA-CSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTP 319

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
              +Y +  + + +         +  +ML + ++P+   Y +++             R +
Sbjct: 320 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTW 379

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
            +M S G + DVVTY T +  Y    +++EAE +  EM +  +    ++Y T++ G+ ++
Sbjct: 380 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI 439

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALL-----------------PGLCDAGKMVEVQK 287
            + D A+ I  +M S    PN  TY  LL                  G+  A ++ +V  
Sbjct: 440 GQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFG 499

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +   M +    P   +    L G   + G    A  ++  M   SI      Y  L+  F
Sbjct: 500 LFDVMKKNEFLPNSGTYSSILEGFS-EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCF 558

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQL 406
           CK++ Y  A  L+  +++   I  PQ        SY  ++  L   GQT KA EIF    
Sbjct: 559 CKSKRYLDAWVLVCSMIQHGFI--PQ------LMSYQHLLSGLICEGQTDKAKEIFMNSR 610

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
            K    D + +  +I G  K+G+ D + E++ ++ R         Y  L E
Sbjct: 611 WKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 661



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 7/241 (2%)

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D   FN+LI G+ +    D A ++   M  RG  +D  +Y  LIE     G   +A    
Sbjct: 9   DAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF 68

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M      P   ++ ++++ L    R +    +++ M E G + +    A +++     
Sbjct: 69  GEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRE 124

Query: 533 GHVEEALGRIDLMMQSGSVPNFDSLLSVLS---EKGKTIAAVKLLDFCLGRDCIIDLASY 589
              +EA   +  M + G  P   +  +V++   ++G+   A+++L+    R C  ++ +Y
Sbjct: 125 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 184

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
             ++      GK   A ++L K+   G   D  + + LI G   +G+ + A  L R++ G
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 244

Query: 650 E 650
           +
Sbjct: 245 D 245



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 56/281 (19%), Positives = 100/281 (35%), Gaps = 58/281 (20%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           N D  T+   +      G+LN A  +L++M K GV  D   +  L++ +   G    +V 
Sbjct: 388 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 447

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY--------------------FNKM 152
           I   +KQ+    SV +    F L+    R  + +                      F+ M
Sbjct: 448 I---LKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 504

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK- 211
                 P   TY+ +L GF    + E A      MK   ISL+   Y  ++  + + K+ 
Sbjct: 505 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 564

Query: 212 ----------------------------------MDEAEKLFAEMKEKNIEPTVISYTTM 237
                                              D+A+++F   + K+  P  I +  +
Sbjct: 565 LDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVI 624

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           I G +    +D +  +   ++  + +P+  TY  L   L D
Sbjct: 625 IDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPD 665


>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
 gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 177/385 (45%), Gaps = 60/385 (15%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK-GVQWDEDMFEVL 97
           +L+FF WV      +H  ETH  ++ IL +  K   A  IL  + +   + +   +FE L
Sbjct: 98  SLEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESL 157

Query: 98  IESYGKKGIVQESVKIFDI--------------------MKQLGVERSVKSYDALFKLIL 137
           + SY    +   S  +FD+                    MK  G   +V+S +A    +L
Sbjct: 158 LYSYR---LCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLL 214

Query: 138 ---------------RR--------------------GRYMMAKRYFNKMLSEGIEPTRH 162
                          RR                    GR   A   F +M + G  P   
Sbjct: 215 NFSRGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVA 274

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
           +YN ++ G+     L +A++    M+  G+  DVVT+NT++NG+ +  K+ EA KLF EM
Sbjct: 275 SYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEM 334

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           K  ++ PT ++Y  +I GY      +   R+F+EM  F VK + +TY AL+ GLC  GK 
Sbjct: 335 KGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKT 394

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            +   ++RE+ E+ + P + S F  L+  QC       A  + K+MI+ S       + +
Sbjct: 395 KKAAYLVRELDEKGLVP-NASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRM 453

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKE 367
           L+  FC+ E YD A++LL++++ + 
Sbjct: 454 LLSTFCENEDYDGAVQLLEEMLNRH 478



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 136/276 (49%), Gaps = 2/276 (0%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL F+R + R+ ++ +    +L +I    ++G+L+ A  +  +M   G   +   +  LI
Sbjct: 222 ALAFYREMRRSRIYPNSYTLNL-VICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLI 280

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             Y  KG++  ++K+  +M++ GV   V +++ L     + G+   A + F +M    + 
Sbjct: 281 AGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLS 340

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT  TYN+++ G+  +   E   R FE+M    +  D++TYN +I G  +  K  +A  L
Sbjct: 341 PTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYL 400

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             E+ EK + P   +++ +I G    ++++ A +I+  M      P   T+  LL   C+
Sbjct: 401 VRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCE 460

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV-QC 313
                   ++L EM+ R+  P  N+++    G+ QC
Sbjct: 461 NEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQC 496



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/271 (20%), Positives = 113/271 (41%), Gaps = 4/271 (1%)

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I   C  G+  KA + F ++   G    VA +N LI G+  +G   SA ++  +M +
Sbjct: 242 NLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEK 301

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            GVP D   +  L+  + + G+  +A      M     SP +  +  ++    + G  + 
Sbjct: 302 NGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEM 361

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
            +R+ + M    VK ++     ++  L   G  ++A   +  + + G VPN   F +L+ 
Sbjct: 362 GNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIY 421

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
               + ++  A ++    +         ++  +L           A  +L +++ +    
Sbjct: 422 GQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAP 481

Query: 620 DWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
           D  +  +L AGL Q G  K A +L   +  +
Sbjct: 482 DVNNLYELCAGLGQCGKVKTAMMLCSELEAQ 512



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/224 (19%), Positives = 97/224 (43%), Gaps = 13/224 (5%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   ++    +VGKL  A  +  +M    +      + +LI  Y K G  +   ++F
Sbjct: 307 DVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLF 366

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M +  V+  + +Y+AL   + + G+   A     ++  +G+ P   T++ +++G  + 
Sbjct: 367 EEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQ 426

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + E A + ++ M     +    T+  +++ +   +  D A +L  EM  ++  P V + 
Sbjct: 427 KQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNL 486

Query: 235 TTMIKGYVAVERADDALRI-------------FDEMKSFDVKPN 265
             +  G     +   A+ +             FD++K+F + P+
Sbjct: 487 YELCAGLGQCGKVKTAMMLCSELEAQRLLPEGFDKLKAFGLLPD 530


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/503 (23%), Positives = 228/503 (45%), Gaps = 15/503 (2%)

Query: 19  PQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           P F  +N+V +VL  A     AL  +R +           T       L R+G+ N A  
Sbjct: 137 PSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALA 196

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  M + G   D  +++ +I +   +G V E+  + + M  +G    V ++D + + + 
Sbjct: 197 LLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMC 256

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
             GR   A R  ++M+++G  P   TY  +L G     + + A      M  R   L+VV
Sbjct: 257 GLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVV 312

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +NT+I G     K+ EA +L+  M  K  +P   +Y+ ++ G   + R   A+R+  EM
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           +     PN VTYT +L   C  G   + + +L EM  + +   ++  +  ++   CK G 
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL-TLNSQGYNGMIYALCKDGR 431

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           ++ A  +++ M       +   Y  +I + C  E  + A  + + L+E+ ++        
Sbjct: 432 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV-------- 483

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
               +YN +I  L  +G+   A    ++++  G  LD V++N LI+   K+GN D +  +
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M  +G+  +  +Y  LI    ++    DA      M+  G +P    + +++  L +
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 497 DGRVQTASRVMKSMVEKGVKENL 519
            G +  A  +++ +  + V  ++
Sbjct: 604 MGWMHAALNLLEKLHNENVHPDI 626



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 231/519 (44%), Gaps = 22/519 (4%)

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS-EGIEPTRHTYNVMLWGFFLSLK 176
           ++ GV+ S +SY+ +  ++ R   +  A   + +M+  + + PT  T+ V         +
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
              A+     M   G   D V Y T+I+       + EA  L  EM        V ++  
Sbjct: 191 ANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +++G   + R  +A R+ D M +    P  +TY  LL GLC   +  E     R M+ R 
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGR- 305

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +P  +  +F  ++G     G L  A ++ + M       +A  Y IL+   CK      A
Sbjct: 306 VPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSA 365

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           ++LL ++ +K               +Y  ++   C NG          ++  KG+ L+  
Sbjct: 366 VRLLREMEKK--------GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N +I    K+G  D A  +++ M  +G   D  +Y  +I       +  +A+   +++
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA--KILEALLMRG 533
           +E+G       + +++ +L  DGR Q A R+ K M+  G   +LD+V+   +++A+   G
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC--SLDVVSYNGLIKAMCKDG 535

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
           +V+ +L  ++ M + G  PN   ++ L+S L ++ +   A++L    L +    D+ +Y 
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
            +++ L   G    A ++L K+  +    D  + + LI+
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 174/360 (48%), Gaps = 6/360 (1%)

Query: 8   TRLQNKIRAL---VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGL--FNHDRETHLKM 62
            R  ++ RA+   VP+ +  L   V+ G        +     E  GL     D  T+  +
Sbjct: 293 VRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           +  L ++G+++ A  +L +M KKG   +   + +++ S+ K G+  ++  + + M   G+
Sbjct: 353 MHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             + + Y+ +   + + GR   A     +M S+G  P   +YN +++    + ++E A  
Sbjct: 413 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 472

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
            FE++   G+  + +TYNT+I+   R  +  +A +L  EM        V+SY  +IK   
Sbjct: 473 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 532

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                D +L + +EM    +KPN V+Y  L+  LC   ++ +  ++ ++M+ + + P D 
Sbjct: 533 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP-DI 591

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             +  L+   CK G ++AA ++L+ +   ++  +   Y ILI   CK  + D A  LL++
Sbjct: 592 VTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/474 (22%), Positives = 210/474 (44%), Gaps = 19/474 (4%)

Query: 180 AIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN-IEPTVISYTTM 237
           A+   + +  R G+     +YN +++   R     +A  L+  M  ++ + PT  ++   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
            +    + RA++AL +   M      P+AV Y  ++  LCD G + E   +L EM+    
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D + F  ++   C  G +  AA ++  M+          YG L++  C+    D A 
Sbjct: 242 A-ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            +L ++ E  ++L            +N +I      G+  +A   +  +  KG   D   
Sbjct: 301 AMLGRVPELNVVL------------FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 348

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           ++ L+ G  K G   SA  +++ M ++G   +   Y  ++ S+ + G   D +  L+ M 
Sbjct: 349 YSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 408

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G +  S  +  ++ +L +DGR+  A  +++ M  +G   ++     I+  L     +E
Sbjct: 409 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 468

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA    + +++ G V N   +++++  L   G+   AV+L    +   C +D+ SY  ++
Sbjct: 469 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 528

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            A+   G    +  +L ++ EKG   +  S + LI+ L +E   + A  LS+ +
Sbjct: 529 KAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 2/297 (0%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A++  R +E+ G F  +  T+  ++    + G  +  R +L +M  KG+  +   +  +I
Sbjct: 365 AVRLLREMEKKG-FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            +  K G + E++ +   M+  G    + SY+ +   +    +   A+  F  +L EG+ 
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
               TYN ++       + + A+R  ++M   G SLDVV+YN +I    +   +D +  L
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM EK I+P  +SY  +I       R  DAL +  +M +  + P+ VTY  L+ GLC 
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            G M     +L ++    + P D   +  L+   CK   L+ AA +L   +    P 
Sbjct: 604 MGWMHAALNLLEKLHNENVHP-DIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPV 659


>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 544

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 207/476 (43%), Gaps = 13/476 (2%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           V  V+    N     +FFR+       +H   T+  ++  L + G  N A+ +   M   
Sbjct: 78  VLEVVKRFNNPNLGFKFFRFTRERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSD 137

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G   D  +   L+ S+        S ++    +  GV+  V  Y+    ++++  R   A
Sbjct: 138 GQLPDSRLLGFLVSSFALADRFDVSKELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDA 197

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
              F +++         T+N+++ G   +  ++ A     DM S G S D+VTYN +++G
Sbjct: 198 ICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHG 257

Query: 206 YNRFKKMDEAEKLFAEMKEK-NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
             R  ++D A  L  E+  K    P V+SYTT+I GY  + + D+A  +F EM     KP
Sbjct: 258 LCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKP 317

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N  T++AL+ G   AG M     + ++++     P +      L+   C++G +N   D+
Sbjct: 318 NVFTFSALVDGFVKAGDMASALGMHKKILFHGCAP-NVITLTSLINGYCRAGWVNHGLDL 376

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
            + M   +IP     Y +LI   CK+     A  LL  L + +I+  P       A  YN
Sbjct: 377 WREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIV--PL------AFVYN 428

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           P+I   C +G   +A     ++ +K   D + F  LI GH  +G    A  I   M   G
Sbjct: 429 PVIDGYCKSGNIDEANAIVAEMEEKCKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASG 488

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              D      L    L+ G P +A    +++ E+     S L +S  ES+  D ++
Sbjct: 489 CTPDDITIRTLSSCLLKSGMPGEAARIKETLFENQE---SILKKSYHESMNADKKI 541



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/425 (21%), Positives = 184/425 (43%), Gaps = 31/425 (7%)

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           ++L +  S  +Y+ L + + + G +  AK  ++ M S+G  P       ++  F L+ + 
Sbjct: 100 ERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRF 159

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + +     + +  G+ +DV+ YN  +N   +  ++D+A  LF E+   +      ++  +
Sbjct: 160 DVSKELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNIL 219

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I+G       D+A  +  +M SF   P+ VTY  LL GLC   ++   + +L E+  +  
Sbjct: 220 IRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCE 279

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              +   +  ++   C+   ++ A+ +   M+R         +  L++ F KA     A+
Sbjct: 280 FAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASAL 339

Query: 358 KLLDKLVEKEI-------------------------ILRPQSTLDMEAS--SYNPMIQHL 390
            +  K++                             + R  +  ++ A+  +Y+ +I  L
Sbjct: 340 GMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISAL 399

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPVAF--NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           C + +  +A    R ++K+  + P+AF  N +I G+ K GN D A  IV  M  +  P D
Sbjct: 400 CKSNRLQEARNLLR-ILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEEKCKP-D 457

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              +  LI  +  KG   +A      M+  G +P     R++   L + G    A+R+ +
Sbjct: 458 KLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSGMPGEAARIKE 517

Query: 509 SMVEK 513
           ++ E 
Sbjct: 518 TLFEN 522



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 162/380 (42%), Gaps = 21/380 (5%)

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           K  R   ER         +  LL   C++G  N+A  +  +M       ++   G L+ +
Sbjct: 93  KFFRFTRERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSS 152

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQ-STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
           F  A+ +D         V KE++   Q S + ++   YN  +  L  + +   A   FR+
Sbjct: 153 FALADRFD---------VSKELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRE 203

Query: 406 LMKK-GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           LM+    LD   FN LIRG    G+ D AFE++  MG  G   D   Y  L+    R  +
Sbjct: 204 LMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQ 263

Query: 465 PADAKTALDSM-IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              A+  L+ + ++   +P    + +V+       ++  AS +   MV  G K N+   +
Sbjct: 264 VDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFS 323

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCL---GR 580
            +++  +  G +  ALG    ++  G  PN  +L S+++   +       LD       R
Sbjct: 324 ALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNAR 383

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK-SSDKLIAGLNQEGNTKQ 639
           +   +L +Y  ++ AL  + +   A ++L +I+++  +       + +I G  + GN  +
Sbjct: 384 NIPANLYTYSVLISALCKSNRLQEARNLL-RILKQSDIVPLAFVYNPVIDGYCKSGNIDE 442

Query: 640 ADILSRMIRGEMSRGSQKEK 659
           A+     I  EM    + +K
Sbjct: 443 AN----AIVAEMEEKCKPDK 458



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 83/212 (39%), Gaps = 14/212 (6%)

Query: 390 LCHNGQTGKAEIFFRQ-LMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR-GVPR 447
           LC N    +   +FR+ L    VL+ V          +  NP+  F+  +    R  +  
Sbjct: 56  LCSNSLDDRFLGYFREHLTPSHVLEVV---------KRFNNPNLGFKFFRFTRERLSMSH 106

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
               Y  L+ S  + G    AK   DSM  DG  P S L   ++ S     R   +  ++
Sbjct: 107 SFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELL 166

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
                 GV+ ++ +    L  L+    +++A+     +M+S S  +   F+ L+  L   
Sbjct: 167 AEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTA 226

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
           G    A +LL       C  D+ +Y  +L  L
Sbjct: 227 GDVDEAFELLGDMGSFGCSPDIVTYNILLHGL 258


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 237/503 (47%), Gaps = 50/503 (9%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALF 133
           AR +  DM K GV  D   F VL+  Y  +G +++++ + + M  +  V     +Y+ + 
Sbjct: 188 AREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTIL 247

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           K + ++GR    K     M   G+ P R TYN +++G+     L+ A +  E MK   I 
Sbjct: 248 KAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNIL 307

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            D+ TYN +ING      + E  +L   MK   ++P V++Y T+I G   +  + +A ++
Sbjct: 308 PDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKL 367

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
            ++M++  VKPN VT+   L  LC   K  EV + ++E+VE +    D   +  L+    
Sbjct: 368 MEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYL 427

Query: 314 KSGHLNAAADVLKAM----IRLSIPT---------------------EAGH--------- 339
           K G L+ A ++++ M    I+++  T                     ++ H         
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEV 487

Query: 340 -YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            YG LI  + + E  ++A ++ D++  K I + P  T      ++N +I  LCH+G+T  
Sbjct: 488 TYGTLIMGYFREEKVEKAFEMWDEM--KRIKITPTVT------TFNSLIGGLCHHGKTEL 539

Query: 399 AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC--L 455
           A   F +L + G+L D   FN++I G+ KEG  + AFE      +       D Y C  L
Sbjct: 540 AMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSF--KPDNYTCNIL 597

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           +    ++G    A    +++I +      + + +++ +  +D +++ A  ++  M EK +
Sbjct: 598 LNGLCKEGMTEKALNFFNTLITEREVDTVT-YNTMISAFCKDKKLKEAYDLLSEMEEKRL 656

Query: 516 KENLDLVAKILEALLMRGHVEEA 538
           + +      I+ +L+  G + EA
Sbjct: 657 EPDRFTYNSIITSLMEDGKLSEA 679



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 216/476 (45%), Gaps = 20/476 (4%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           N D  T+  +++ + + G+L+  + +LLDM + G+  +   +  L+  Y K G ++E+ +
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           I ++MKQ  +   + +Y+ L   +   G         + M S  ++P   TYN ++ G F
Sbjct: 297 IVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCF 356

Query: 173 -LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN-IEPT 230
            L L LE A +  E M++ G+  + VT+N  +    + +K +E  +   E+ E +   P 
Sbjct: 357 ELGLSLE-AKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPD 415

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           +++Y T+IK Y+ V     AL +  EM    +K N +T   +L  LC   K+ E   +L 
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLD 475

Query: 291 EMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
              +R YI   D   +  L+    +   +  A ++   M R+ I      +  LI   C 
Sbjct: 476 SAHKRGYI--VDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCH 533

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
               + A++  D+L E        S L  +  ++N +I   C  G+  KA  F+ + +K 
Sbjct: 534 HGKTELAMEKFDELAE--------SGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKH 585

Query: 410 GV-LDPVAFNNLIRGHSKEGNPDSAFEIVK-IMGRRGVPRDADAYICLIESYLRKGEPAD 467
               D    N L+ G  KEG  + A      ++  R V  D   Y  +I ++ +  +  +
Sbjct: 586 SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV--DTVTYNTMISAFCKDKKLKE 643

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK--GVKENLDL 521
           A   L  M E    P    + S++ SL EDG++  A  ++K    K   +K NL L
Sbjct: 644 AYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHL 699



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 132/565 (23%), Positives = 242/565 (42%), Gaps = 40/565 (7%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG---FFLSLKLETAIRFFE 185
           +D      L  G+  +A + F KM+   ++P   T N +L G   +  S  + +A   F+
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFD 193

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVAV 244
           DM   G+SLDV T+N ++NGY    K+++A  +   M  E N+ P  ++Y T++K     
Sbjct: 194 DMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKK 253

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            R  D   +  +MK   + PN VTY  L+ G C  G + E  +++  M +  I P D   
Sbjct: 254 GRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP-DLCT 312

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+   C +G +    +++  M  L +  +   Y  LI+   +  +   A KL++++ 
Sbjct: 313 YNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQME 372

Query: 365 E-----------------------KEIILRPQSTLDMEASS-----YNPMIQHLCHNGQT 396
                                   +E+  + +  ++M   S     Y+ +I+     G  
Sbjct: 373 NDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDL 432

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A    R++ +KG+ ++ +  N ++    KE   D A  ++    +RG   D   Y  L
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTL 492

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I  Y R+ +   A    D M     +P  + F S++  L   G+ + A      + E G+
Sbjct: 493 IMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGL 552

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             +      I+      G VE+A    +  ++    P+    + LL+ L ++G T  A+ 
Sbjct: 553 LPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
             +  L  +  +D  +Y  ++ A     K   AY +L ++ EK    D  + + +I  L 
Sbjct: 613 FFN-TLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLM 671

Query: 633 QEGNTKQADILSRMIRGEMSRGSQK 657
           ++G   +AD L +   G+   GS K
Sbjct: 672 EDGKLSEADELLKKFSGKF--GSMK 694



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/376 (21%), Positives = 163/376 (43%), Gaps = 22/376 (5%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q  HN+    L   +  E   +  + +     F+ D  T+  +I+   +VG L+ A  ++
Sbjct: 380 QVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M +KG++ +      ++++  K+  V E+  + D   + G      +Y  L     R 
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFRE 499

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
            +   A   +++M    I PT  T+N ++ G     K E A+  F+++   G+  D  T+
Sbjct: 500 EKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTF 559

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N++I GY +  ++++A + + E  + + +P   +   ++ G       + AL  F+ + +
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIT 619

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
            + + + VTY  ++   C   K+ E   +L EM E+ + P D   +  ++    + G L+
Sbjct: 620 -EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEP-DRFTYNSIITSLMEDGKLS 677

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A ++LK          +G +G +  N       + A                +  L  E
Sbjct: 678 EADELLKKF--------SGKFGSMKRNLHLETEKNPATS------------ESKEELKTE 717

Query: 380 ASSYNPMIQHLCHNGQ 395
           A +Y+ +I  LC  G+
Sbjct: 718 AIAYSDVINELCSRGR 733


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 234/517 (45%), Gaps = 47/517 (9%)

Query: 94  FEVLIESYGKKGIVQESV-KIFDIMKQL--------GVERSVKSYDALFKLILRRGRYMM 144
           F++LIE Y K  I Q+ + K F+I  +         G E    +     K    +G+   
Sbjct: 223 FKILIE-YHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQ 281

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  + +K+++ G    + +Y  ++ G     + + A+        + +  DVV YNT+I+
Sbjct: 282 ALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIID 341

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G  + K +++A  L++E   K I P V +Y  +I G+  V +  DA+ +F++M S ++ P
Sbjct: 342 GMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIP 401

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           +  T++ L+ G C  G + E + VL  M+++ I P D   +  L+   C    +N A  +
Sbjct: 402 DVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKP-DVVTYSSLMDGYCLVNEVNKAESI 460

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLDMEAS 381
              M    +      Y I+I  FCK +M D A+KL  ++  K+I   ++   S +D    
Sbjct: 461 FNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCK 520

Query: 382 S------------------------YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
           S                        YN ++  LC      KA     +L  +G+  D   
Sbjct: 521 SGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNT 580

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  L++G  + G  + A ++ + +  +G   D  AY  +I+ +  KG   +A   L  M 
Sbjct: 581 YTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL--DLVAKILEALLMRGH 534
           E+G  P +  +  ++ SLFE      A ++++ M+ +G+   L  DLVA IL        
Sbjct: 641 ENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALTDDLVASILVRRTWCAR 700

Query: 535 VEEALGRIDLMMQSGSV-PNFDSLLSVLSEKGKTIAA 570
           +   +  I L+++   + P FD     +S++GK + A
Sbjct: 701 LALWVTFISLLLRVIELKPGFD-----ISDEGKAVVA 732



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 219/484 (45%), Gaps = 48/484 (9%)

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           K+L  G EP   T    + GF L  ++  A+ F + + + G  LD V+Y T+ING  +  
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +   A +L      K ++P V+ Y T+I G    +  +DA  ++ E  S  + P+  TY 
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
           AL+ G C  GK+ +   +  +M  + I P D   F  L+   CK G++  A +VL  M++
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIP-DVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
            SI  +   Y  L++ +C     ++A  + + +  + +    QS        YN MI   
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQS--------YNIMINGF 483

Query: 391 CHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C      +A   F+++  K +  D + +++LI G  K G    A E+V  M  RG   D 
Sbjct: 484 CKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDI 543

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  ++++  +K     A T L  +   G  P  + +  +++ L + G+++ A +V + 
Sbjct: 544 ITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED 603

Query: 510 MVEKGVKENLDLVAK--ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKT 567
           ++ KG   NLD+ A   +++    +G  +EAL                +LLS + E G  
Sbjct: 604 LLVKGY--NLDVYAYTVMIQGFCDKGLFDEAL----------------ALLSKMEENG-- 643

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
                         CI D  +YE ++ +L    +   A  +L +++ +G +     +D L
Sbjct: 644 --------------CIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLV--ALTDDL 687

Query: 628 IAGL 631
           +A +
Sbjct: 688 VASI 691



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 198/410 (48%), Gaps = 11/410 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
             AL F   V   G F+ D+ ++  +I  L +VG+   A  +L     K VQ D  M+  
Sbjct: 280 HQALHFHDKVIAMG-FHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNT 338

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I+   K   V ++  ++       +   V +Y+AL       G+   A   FNKM S+ 
Sbjct: 339 IIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKN 398

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I P  +T+++++ GF     ++ A      M  + I  DVVTY+++++GY    ++++AE
Sbjct: 399 IIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAE 458

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +F  M  + +   V SY  MI G+  ++  D+A+++F EM    + P+ +TY++L+ GL
Sbjct: 459 SIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGL 518

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C +G++    +++ EM  R   P D   +  +L   CK  H++ A  +L  +    I  +
Sbjct: 519 CKSGRISYALELVDEMHYRGQQP-DIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPD 577

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y IL++  C++   + A K+ + L+ K          +++  +Y  MIQ  C  G  
Sbjct: 578 MNTYTILVKGLCQSGKLEDARKVFEDLLVK--------GYNLDVYAYTVMIQGFCDKGLF 629

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
            +A     ++ + G + D   +  +I    ++   D A ++++ M  RG+
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 112/529 (21%), Positives = 202/529 (38%), Gaps = 58/529 (10%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   F ++L +   P    +  +L     S    T +   + M+ +GI L+ +  N +IN
Sbjct: 94  AVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILIN 153

Query: 205 GYNRFKKMDEAEKLFAE-----------MKEKNIEP-TVISYTTMIKGYVAVERADDAL- 251
            + +   +  A  +                 KN+E    + +  +I          D L 
Sbjct: 154 SFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQ 213

Query: 252 -RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE---RYIPPK------- 300
            R+F+ + SF +             L +  K    QK L +  E    Y PPK       
Sbjct: 214 SRLFNVLHSFKI-------------LIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYE 260

Query: 301 -DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D       +   C  G ++ A      +I +    +   YG LI   CK      A++L
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320

Query: 360 L----DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDP 414
           L     KLV+ ++++            YN +I  +C +     A +++  ++ K+   D 
Sbjct: 321 LRRNDGKLVQPDVVM------------YNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDV 368

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             +N LI G    G    A ++   M  + +  D   +  L++ + + G   +AK  L  
Sbjct: 369 FTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAM 428

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M++    P    + S+M+       V  A  +  +M  +GV  N+     ++        
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKM 488

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           V+EA+     M      P+   + SL+  L + G+   A++L+D    R    D+ +Y  
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +LDAL        A ++L K+  +G   D  +   L+ GL Q G  + A
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDA 597


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 231/507 (45%), Gaps = 15/507 (2%)

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           L  A  +   M  +G   +   F VLIE + K G ++++++ +  M+ LG+  SV     
Sbjct: 354 LGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHT 413

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           + +  L+  ++  A + F++    G+        ++ W      K++ A      M+SRG
Sbjct: 414 IIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSW-LCKQGKIDKATELLRKMESRG 472

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I  +VV+YN ++  + R K MD A  +F+ M EK ++P   +Y+ +I G        + L
Sbjct: 473 IGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVL 532

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            + ++M S +++ N V Y  ++ GLC  G+  + +++L  M+E          +  ++  
Sbjct: 533 EVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDG 592

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
             K G ++ A    + M    I      Y  L++  CK    D+A+++ D++  K +   
Sbjct: 593 FIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGV--- 649

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGN 429
               LD+ A  Y  +I   C       A   F +L+++G L+P    +N+LI G    GN
Sbjct: 650 ---KLDIPA--YGALIHGFCKKSNMESASALFSELLEEG-LNPSQPVYNSLISGFRNLGN 703

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
             +A ++ K M + G+  D   Y  LI+  L++G    A      M   G  P   ++  
Sbjct: 704 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTV 763

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++  L + G+     ++ + M +  V  N+ +   ++      G+++EA    D M+  G
Sbjct: 764 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 823

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKL 573
            +P+   FD L+S    K + I A  L
Sbjct: 824 ILPDGATFDILVSGKVGKFQPIRAASL 850



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 134/594 (22%), Positives = 267/594 (44%), Gaps = 16/594 (2%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM-PKKGVQWDEDMFEVLIES 100
           F R +ER      D   +   ++   +   L  A  +L +M  KK     ++ +  +I +
Sbjct: 255 FSRAIERGA--EPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILA 312

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
             K+G ++++++  D M   G+  +V +  +L     +      A   F KM +EG  P 
Sbjct: 313 SVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPN 372

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
             T++V++  F  + ++E A+ F++ M+S G++  V   +T+I G+ + +K +EA KLF 
Sbjct: 373 SVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFD 432

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           E  E  +    I   T++       + D A  +  +M+S  + PN V+Y  ++   C   
Sbjct: 433 ESFETGLANVFIC-NTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKK 491

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            M   + V   M+E+ + P +N  +  L+    K+       +V+  M   +I      Y
Sbjct: 492 NMDLARTVFSNMLEKGLKP-NNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVY 550

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
             +I   CK     +A +LL  ++E       +    +   SYN +I      G+   A 
Sbjct: 551 QTIINGLCKVGQTSKARELLANMIE-------EKRFCVSCMSYNSIIDGFIKEGEMDYAV 603

Query: 401 IFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
             + ++   G+  + + + +L+ G  K    D A E+   M  +GV  D  AY  LI  +
Sbjct: 604 AAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGF 663

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            +K     A      ++E+G +P+  ++ S++      G +  A  + K M++ G++ +L
Sbjct: 664 CKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL 723

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                +++ LL  G++  A      M   G VP+   +  +++ LS+KG+ +  VK+ + 
Sbjct: 724 GTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEE 783

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
               +   ++  Y  V+      G    A+ +  ++++KG + D  + D L++G
Sbjct: 784 MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 139/659 (21%), Positives = 278/659 (42%), Gaps = 45/659 (6%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL-------GRVGKLNH 74
           D +++  +L+   N E AL+F+ W         D +    +I IL       GR   L  
Sbjct: 71  DASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVTSPETYGRASDL-L 129

Query: 75  ARCILLDMPKK----------------GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
            R +    P                  G + +   F  L+ +Y K      +V I + M 
Sbjct: 130 IRYVSTSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQML 189

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           +LGV   V   +     +++R     AK  +++M++ G++    T  +++       K  
Sbjct: 190 ELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPA 249

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI-EPTVISYTTM 237
            A+  F     RG   D + Y+  +    +   +  A  L  EMKEK +  P+  +YT++
Sbjct: 250 EALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSV 309

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I   V     +DA+R  DEM S  +  N V  T+L+ G C    +     +  +M E   
Sbjct: 310 ILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKM-ENEG 368

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
           P  ++  F  L+    K+G +  A +  K M  L +     H   +I+ + K + ++ A+
Sbjct: 369 PSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEAL 428

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSY--NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           KL D+  E  +           A+ +  N ++  LC  G+  KA    R++  +G+  + 
Sbjct: 429 KLFDESFETGL-----------ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNV 477

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V++NN++  H ++ N D A  +   M  +G+  +   Y  LI+   +  +  +    ++ 
Sbjct: 478 VSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQ 537

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV-EKGVKENLDLVAKILEALLMRG 533
           M          ++++++  L + G+   A  ++ +M+ EK    +      I++  +  G
Sbjct: 538 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEG 597

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
            ++ A+   + M  +G  PN   + SL+  L +  +   A+++ D    +   +D+ +Y 
Sbjct: 598 EMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 657

Query: 591 KVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
            ++          +A ++  +++E+G        + LI+G    GN   A D+  +M++
Sbjct: 658 ALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLK 716



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 5/149 (3%)

Query: 26  VYN-VLHGAKNSEH---ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           VYN ++ G +N  +   AL  ++ + + GL   D  T+  +I+ L + G L  A  +  +
Sbjct: 690 VYNSLISGFRNLGNMVAALDLYKKMLKDGL-RCDLGTYTTLIDGLLKEGNLILASDLYTE 748

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G+  DE M+ V++    KKG   + VK+F+ MK+  V  +V  Y+A+     R G 
Sbjct: 749 MQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 808

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
              A R  ++ML +GI P   T+++++ G
Sbjct: 809 LDEAFRLHDEMLDKGILPDGATFDILVSG 837



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 4/180 (2%)

Query: 29  VLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           ++HG     N E A   F  +   GL N  +  +  +I     +G +  A  +   M K 
Sbjct: 659 LIHGFCKKSNMESASALFSELLEEGL-NPSQPVYNSLISGFRNLGNMVAALDLYKKMLKD 717

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G++ D   +  LI+   K+G +  +  ++  M+ +G+      Y  +   + ++G+++  
Sbjct: 718 GLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKV 777

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            + F +M    + P    YN ++ G +    L+ A R  ++M  +GI  D  T++ +++G
Sbjct: 778 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 198/427 (46%), Gaps = 10/427 (2%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  +  T+  +I  L +VG  + A  +L  M +   Q D  ++  +I+S  K   V ++ 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            +F  M   G+  S+ +Y++L   +     +       N+M++  I P    ++ ++   
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               K+  A    + M  RG+  +VVTYN +++G+    +MDEA K+F  M  K   P V
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           +SY+T+I GY  ++R + A+ +F+EM   ++ PN VTY+ L+ GLC  G++ +   +  E
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 408

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           MV R   P D   +  LL   CK+  L+ A  +LKA+   ++  +   Y I+I+  C+A 
Sbjct: 409 MVTRGQIP-DFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 467

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             + A  L   L  K   L P         +Y  MI  LC  G   +A   F ++ +KG 
Sbjct: 468 ELEAARDLFSNLSSKG--LHPN------VWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             +   +N + RG  +        ++++ M  RG   D      L+E     G     K 
Sbjct: 520 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQ 579

Query: 471 ALDSMIE 477
            L   ++
Sbjct: 580 ILSEFLQ 586



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 207/459 (45%), Gaps = 13/459 (2%)

Query: 64  EILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           ++L  + K+ H   +L     M   G+  +     +LI S+     +  +  +   + +L
Sbjct: 73  KLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKL 132

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G + ++ +++ L + +   G+       F+KM+ EG +P   TY  ++ G         A
Sbjct: 133 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 192

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           IR    M+      DVV Y ++I+   + +++ +A  LF+EM  + I P++ +Y ++I  
Sbjct: 193 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHA 252

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
              +        + +EM +  + PN V ++ ++  LC  GK++E   V+  M++R + P 
Sbjct: 253 LCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP- 311

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           +   +  L+   C    ++ A  V   M+      +   Y  LI  +CK +  ++A+ L 
Sbjct: 312 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 371

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNN 419
           +++  KE+I  P +       +Y+ ++  LCH G+   A   F +++ +G + D V++  
Sbjct: 372 EEMCRKELI--PNTV------TYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 423

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+    K    D A  ++K +    +  D   Y  +I+   R GE   A+    ++   G
Sbjct: 424 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 483

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             P    +  ++  L + G +  AS++   M  KG   N
Sbjct: 484 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 522



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/509 (21%), Positives = 215/509 (42%), Gaps = 52/509 (10%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML     P+   +  +L          T +     M S GI  ++ T N +IN +  
Sbjct: 56  FNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCH 115

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
            +++  A  + A++ +   +P + ++ T+I+G     +  + L +FD+M     +PN VT
Sbjct: 116 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 175

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ GL                                    CK G  +AA  +L++M
Sbjct: 176 YGTLINGL------------------------------------CKVGSTSAAIRLLRSM 199

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
            + +   +   Y  +I++ CK     +A  L  +++ + I             +YN +I 
Sbjct: 200 EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGI--------SPSIFTYNSLIH 251

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC+  +         +++   ++ + V F+ ++    KEG    A ++V +M +RGV  
Sbjct: 252 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +   Y  L++ +  + E  +A    D+M+  G +P    + +++    +  R++ A  + 
Sbjct: 312 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 371

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEK 564
           + M  K +  N    + ++  L   G +++A+     M+  G +P+F S   LL  L + 
Sbjct: 372 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 431

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
            +   A+ LL    G +   D+  Y  V+D +  AG+   A  +   +  KG   +  + 
Sbjct: 432 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 491

Query: 625 DKLIAGLNQEGNTKQADILSRMIRGEMSR 653
             +I GL Q+G   +A  L     GEM R
Sbjct: 492 TIMINGLCQQGLLAEASKL----FGEMKR 516


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 197/409 (48%), Gaps = 12/409 (2%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K  V  D   F ++I+   + G   +  ++  ++++ G+  +V  Y  L     + G  M
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           +AK  F KM   G+ P  HTY+V++ GFF         + +E+MK  GI  +   YN +I
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           + Y     +D+A K+FAEM+EK I   V++Y  +I G    ++  +A+++  ++    + 
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           PN VTY  L+ G CD  KM    ++  ++    + P   + +  L+    K  +L  A D
Sbjct: 331 PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVT-YNTLIAGYSKVENLAGALD 389

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           ++K M    I      Y ILI+ F +    ++A + +  L+EK       S L  +  +Y
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNHTEKACE-MHSLMEK-------SGLVPDVYTY 441

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           + ++  LC +G   +A   F+ L +   L P  V +N +I G+ KEG+   A  ++  M 
Sbjct: 442 SVLLHGLCVHGNMKEASKLFKSLGEMH-LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMV 500

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           + G+  +  ++   I    R  +  +A+  L  MI  G  P+ SL++ V
Sbjct: 501 QSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 154/296 (52%), Gaps = 3/296 (1%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M + G+  +   +  LI  Y   G+V ++ K+F  M++ G+   V +Y+ L   + R  
Sbjct: 253 NMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK 312

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           ++  A +  +K+   G+ P   TYN+++ GF    K+++A+R F  +KS G+S  +VTYN
Sbjct: 313 KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYN 372

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+I GY++ + +  A  L  EM+E+ I P+ ++YT +I  +  +   + A  +   M+  
Sbjct: 373 TLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKS 432

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+  TY+ LL GLC  G M E  K+ + + E ++ P ++ ++  ++   CK G    
Sbjct: 433 GLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQP-NSVIYNTMIHGYCKEGSSYR 491

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
           A  +L  M++  +      +   I   C+ E +  A  LL +++     L+P  +L
Sbjct: 492 ALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSG--LKPSVSL 545



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 176/355 (49%), Gaps = 13/355 (3%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G +  A+ +   M + G+  +   + VL+  + K+G+ +E  ++++ MK+ G+  +  +Y
Sbjct: 207 GNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAY 266

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L       G    A + F +M  +GI     TYN+++ G     K   A++    +  
Sbjct: 267 NCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G+S ++VTYN +ING+   +KMD A +LF ++K   + PT+++Y T+I GY  VE    
Sbjct: 327 VGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG 386

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV--LREMVERYIPPKDNSVFMK 307
           AL +  EM+   + P+ VTYT L+       ++   +K   +  ++E+     D   +  
Sbjct: 387 ALDLVKEMEERCIAPSKVTYTILIDAF---ARLNHTEKACEMHSLMEKSGLVPDVYTYSV 443

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           LL   C  G++  A+ + K++  + +   +  Y  +I  +CK     RA++LL+++V   
Sbjct: 444 LLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMV--- 500

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIR 422
                QS +    +S+   I  LC + +  +AE+   Q++  G+   V+   ++ 
Sbjct: 501 -----QSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVH 550



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 185/435 (42%), Gaps = 13/435 (2%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           YD +    +       A  + + M+ EG  P  +T+N +L     S   + A   F ++K
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           S+ + LD  ++  MI G        +  +L A ++E  + P V+ YTT+I G        
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A  +F +M    + PN  TY+ L+ G    G   E  ++   M    I P +   +  L
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVP-NAYAYNCL 269

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   C  G ++ A  V   M    I      Y ILI   C+ + +  A+KL+ K+   ++
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV--NKV 327

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSK 426
            L P         +YN +I   C   +   A   F QL   G L P  V +N LI G+SK
Sbjct: 328 GLSPNIV------TYNILINGFCDVRKMDSAVRLFNQLKSSG-LSPTLVTYNTLIAGYSK 380

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
             N   A ++VK M  R +      Y  LI+++ R      A      M + G  P    
Sbjct: 381 VENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYT 440

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           +  ++  L   G ++ AS++ KS+ E  ++ N  +   ++      G    AL  ++ M+
Sbjct: 441 YSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMV 500

Query: 547 QSGSVPNFDSLLSVL 561
           QSG VPN  S  S +
Sbjct: 501 QSGMVPNVASFCSTI 515



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 159/368 (43%), Gaps = 17/368 (4%)

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L  M+     P  N+ F  LL +  +S + + A  +   + +  +  +A  +GI+I+  C
Sbjct: 112 LHHMIHEGHVPLSNT-FNNLLCLLIRSNYFDKAWWIFNEL-KSKVVLDAYSFGIMIKGCC 169

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           +A  + +  +LL  L  +E  L P   +      Y  +I   C +G    A+  F ++ +
Sbjct: 170 EAGYFVKGFRLLAML--EEFGLSPNVVI------YTTLIDGCCKDGNVMLAKNLFCKMNR 221

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G++ +P  ++ L+ G  K+G     F++ + M R G+  +A AY CLI  Y   G    
Sbjct: 222 LGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDK 281

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A      M E G +     +  ++  L    +   A +++  + + G+  N+     ++ 
Sbjct: 282 AFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILIN 341

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
                  ++ A+   + +  SG  P    +++L++  S+      A+ L+     R    
Sbjct: 342 GFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAP 401

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGG-VTDWKSSDKLIAGLNQEGNTKQADIL 643
              +Y  ++DA      T  A   +  +MEK G V D  +   L+ GL   GN K+A  L
Sbjct: 402 SKVTYTILIDAFARLNHTEKACE-MHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKL 460

Query: 644 SRMIRGEM 651
            + + GEM
Sbjct: 461 FKSL-GEM 467



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 5/249 (2%)

Query: 25  LVYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN+L G     K    A++    V + GL + +  T+  +I     V K++ A  +  
Sbjct: 299 MTYNILIGGLCRGKKFGEAVKLVHKVNKVGL-SPNIVTYNILINGFCDVRKMDSAVRLFN 357

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            +   G+      +  LI  Y K   +  ++ +   M++  +  S  +Y  L     R  
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A    + M   G+ P  +TY+V+L G  +   ++ A + F+ +    +  + V YN
Sbjct: 418 HTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN 477

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           TMI+GY +      A +L  EM +  + P V S+ + I      E+  +A  +  +M + 
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINS 537

Query: 261 DVKPNAVTY 269
            +KP+   Y
Sbjct: 538 GLKPSVSLY 546



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 104/224 (46%), Gaps = 3/224 (1%)

Query: 12  NKIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
           NK+  L P    +N++ N     +  + A++ F  ++ +GL +    T+  +I    +V 
Sbjct: 325 NKV-GLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGL-SPTLVTYNTLIAGYSKVE 382

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            L  A  ++ +M ++ +   +  + +LI+++ +    +++ ++  +M++ G+   V +Y 
Sbjct: 383 NLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYS 442

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L   +   G    A + F  +    ++P    YN M+ G+        A+R   +M   
Sbjct: 443 VLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQS 502

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           G+  +V ++ + I    R +K  EAE L  +M    ++P+V  Y
Sbjct: 503 GMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 57/284 (20%), Positives = 116/284 (40%), Gaps = 11/284 (3%)

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPM----IQHLCHNGQTGKAEIFFRQLMKKGVL 412
           ++L+   +   ++L+         S+Y P+    +    H+  T +A  F   ++ +G +
Sbjct: 62  LRLISGRIPSSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHV 121

Query: 413 DPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
            P++  FNNL+    +    D A+ I   +  + V  DA ++  +I+     G       
Sbjct: 122 -PLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFR 179

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            L  + E G SP   ++ ++++   +DG V  A  +   M   G+  N    + ++    
Sbjct: 180 LLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFF 239

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            +G   E     + M +SG VPN   ++ L+S     G    A K+      +     + 
Sbjct: 240 KQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVM 299

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           +Y  ++  L    K   A  ++ K+ + G   +  + + LI G 
Sbjct: 300 TYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 185/379 (48%), Gaps = 10/379 (2%)

Query: 87  VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
           ++ D   F +LI  + +   V  +  +   + +LG E    ++ +L   +    ++  A 
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
            +F++M++ G +P  HTYN ++ GF    K   A+   + M   G   D+V YNT+I+G 
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            + + + EA  +F+E+K K + P V +Y+ ++ G    ++ ++A  +F+EM S ++ P+ 
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VT+  L+  LC  G + E Q +++ M+E+ + P + + +  L+   C    +  A  V  
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEP-NYATYNSLMNGYCLQNKVFEARMVFD 353

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
           AMI          Y ILI  +CKA+  D A +L D++  + +I  P +       +YN +
Sbjct: 354 AMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLI--PNTF------NYNTL 405

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC  G+  +A   F+ +  +G   D V    L+    K G  D+A  + + M    +
Sbjct: 406 ISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCL 465

Query: 446 PRDADAYICLIESYLRKGE 464
             +   Y  LI +  + G+
Sbjct: 466 KPNLVTYDILIRAMYKSGK 484



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 149/306 (48%), Gaps = 2/306 (0%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A++FF  +  +G +  +  T+  +I+   ++GK   A  +L  M K G + D  ++  +I
Sbjct: 173 AMEFFDEMVASG-YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTII 231

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +   K  +V E++ IF  +K  GV   V +Y  L   +    +   A   FN+M+S  I 
Sbjct: 232 DGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIM 291

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   T+N+++        L  A    + M  +G+  +  TYN+++NGY    K+ EA  +
Sbjct: 292 PDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMV 351

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M  K   P V+SY  +I GY   +R D+A  +FDEM    + PN   Y  L+ GLC 
Sbjct: 352 FDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQ 411

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           AG+  E +++ ++M  +   P D      LL   CK G+L+ A  + +AM    +     
Sbjct: 412 AGRHCEARELFKDMQAQGCSP-DLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLV 470

Query: 339 HYGILI 344
            Y ILI
Sbjct: 471 TYDILI 476



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 185/433 (42%), Gaps = 21/433 (4%)

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +E A+  F  M  +     +V ++ +++   R K       L   ++   IE  V  +  
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I  +  ++R D A  +  ++     +P+AVT+++L+ GLC   K     +   EMV   
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
             P  ++    + G  CK G    A  +LK M +     +   Y  +I+  CK  +   A
Sbjct: 185 YQPNLHTYNTIIKGF-CKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           + +  ++  K +  RP      +  +Y+ ++  LC++ Q  +A   F ++M   ++ D V
Sbjct: 244 LDIFSEIKGKGV--RP------DVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            FN L+    KEG    A  I+KIM  +GV  +   Y  L+  Y  + +  +A+   D+M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
           I  G  P    +  ++    +  R+  A  +   M  +G+  N      ++  L   G  
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 536 EEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLL----DFCLGRDCIIDLAS 588
            EA      M   G  P+  +   LL  L + G    A++L     D CL      +L +
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKP----NLVT 471

Query: 589 YEKVLDALLAAGK 601
           Y+ ++ A+  +GK
Sbjct: 472 YDILIRAMYKSGK 484



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 133/260 (51%), Gaps = 1/260 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L   +    AL  F  ++  G+   D  T+  ++  L    +   A  +  +M
Sbjct: 227 YNTIIDGLCKDRLVSEALDIFSEIKGKGV-RPDVFTYSILMHGLCNSDQKEEASALFNEM 285

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               +  D   F +L++   K+G++ E+  I  IM + GVE +  +Y++L      + + 
Sbjct: 286 MSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKV 345

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F+ M+++G  P   +YN+++ G+  + +++ A   F++M  RG+  +   YNT+
Sbjct: 346 FEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTL 405

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +  +  EA +LF +M+ +   P +++ T ++     +   D+ALR+F  M+   +
Sbjct: 406 ISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCL 465

Query: 263 KPNAVTYTALLPGLCDAGKM 282
           KPN VTY  L+  +  +GK+
Sbjct: 466 KPNLVTYDILIRAMYKSGKI 485



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 172/412 (41%), Gaps = 15/412 (3%)

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
            ++   +DAL  F+ M      P  V +  LL  L        V   L + +E     +D
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLS-LSKRIELLRIERD 118

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  L+    +   ++ A  VL  +I+L    +A  +  LI   C  + + RA++  D
Sbjct: 119 VFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFD 178

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNL 420
           ++V         S       +YN +I+  C  G+T  A    +++ K G   D V +N +
Sbjct: 179 EMVA--------SGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTI 230

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  K+     A +I   +  +GV  D   Y  L+       +  +A    + M+    
Sbjct: 231 IDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNI 290

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    F  +++ L ++G +  A  ++K M+EKGV+ N      ++    ++  V EA  
Sbjct: 291 MPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARM 350

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
             D M+  G +PN   ++ L++   +  +   A +L D    R  I +  +Y  ++  L 
Sbjct: 351 VFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLC 410

Query: 598 AAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGLNQEGNTKQADILSRMIR 648
            AG+   A   LFK M+  G + D  +   L+  L + G    A  L R ++
Sbjct: 411 QAGRHCEARE-LFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQ 461


>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800-like [Brachypodium distachyon]
          Length = 821

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 144/609 (23%), Positives = 262/609 (43%), Gaps = 63/609 (10%)

Query: 42  FFRWVERAGL-FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
           F  WVE   +    D   H   I  L   GK++ A  IL ++ ++ VQ +   F V+++ 
Sbjct: 245 FKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDG 304

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
             K+  ++E  K+ +   + G+   +  Y  L +   + G  +    ++  M+S G+E  
Sbjct: 305 LCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEAN 364

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
            H  + +L  F           +F+  +  G+ +D V YN  ++ Y +   MDEA KL  
Sbjct: 365 CHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLG 424

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           EM    + P  I YT +IKGY       +A + F+EM   +VKP+ VTY  L  GL   G
Sbjct: 425 EMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRG 484

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            ++EV  ++  M +R + P  NS+                                   Y
Sbjct: 485 LVMEVFDLIGHMEDRGLQP--NSL----------------------------------TY 508

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
           G++I+ FC+ +    A  L + + EK I        D     Y+ M+    H G T  A 
Sbjct: 509 GVVIDGFCRGDNLSEAEVLFNIVEEKGI--------DNIEVLYSSMVCGYLHKGWTDNAY 560

Query: 401 IFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
           + F ++ K+G ++D  + + LI    ++GN   A  +   M  +    D  +Y  LI +Y
Sbjct: 561 VLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAY 620

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            + G+  +A+     M++ G      ++  +M    + G +Q A  +   M   G+K ++
Sbjct: 621 CQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDI 680

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLG 579
                I   +L+ GH++E L R       G   +  SLL + +++ + ++++K ++    
Sbjct: 681 -----IAYTVLLDGHLKEDLQR----RWQGISRDKRSLL-LRAKQNRLLSSMKEMEI--- 727

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
                D+  Y  ++D    +     A  +  ++++KG   D  +   LI G   +G   +
Sbjct: 728 ---EPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAK 784

Query: 640 A-DILSRMI 647
           A D+   M+
Sbjct: 785 AEDLFQEMV 793



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 135/614 (21%), Positives = 245/614 (39%), Gaps = 80/614 (13%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A  +F+  E  G F HD  T+ +++ IL   G+                     +F +  
Sbjct: 84  AFAYFKDAESVG-FRHDFSTYAEIVHILSHSGQ------------------GRMLFSLFC 124

Query: 99  ESYG-KKGIVQESVKIFDIMKQLGVERSVKSYDALFK---LILRRGRYMMAKR---YFNK 151
           E      G   E V + D +K+        SY  LF    LI        A+     F +
Sbjct: 125 EIVSPTSGGGPEIVPLMDQLKR----TCTTSYPLLFATNCLITACTTCCDARDTIGLFGE 180

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           +   G+ P   T N++L     S   E  +  +++MK   ++LD  +   +     + KK
Sbjct: 181 LCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIITRSLFQEKK 240

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
            D+A K++ EM E  ++P V  +++ I G     + D A  I  E+    V+  A+ +  
Sbjct: 241 ADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNV 300

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           ++ GLC   ++ EV+K+L   V + + P D   +  L+   CK G+L    D  +AM+  
Sbjct: 301 VMDGLCKEMRLEEVEKLLENKVRQGLTP-DIYGYSYLIRSYCKVGNLLKVLDHYQAMVSH 359

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            +         L++ F K                                          
Sbjct: 360 GLEANCHIMSYLLQCFTKL----------------------------------------- 378

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G   +   +F++    G+ +D V +N  +  + K GN D A +++  M   G+  D  
Sbjct: 379 --GMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRI 436

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y CLI+ Y  KG+  +A+ A + M++    P    +  +   L + G V     ++  M
Sbjct: 437 HYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHM 496

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS----EKGK 566
            ++G++ N      +++      ++ EA    +++ + G + N + L S +      KG 
Sbjct: 497 EDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKG-IDNIEVLYSSMVCGYLHKGW 555

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
           T  A  L      +  ++D  S  K++  L   G +  A ++   ++EK  V D  S  K
Sbjct: 556 TDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSK 615

Query: 627 LIAGLNQEGNTKQA 640
           LI+   Q G+ + A
Sbjct: 616 LISAYCQTGDMRNA 629



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 168/412 (40%), Gaps = 71/412 (17%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           ++G ++ A  +L +M   G+  D   +  LI+ Y  KG +Q + + F+ M +  V+  V 
Sbjct: 412 KLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVV 471

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L   + +RG  M        M   G++P   TY V++ GF     L  A   F  +
Sbjct: 472 TYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIV 531

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLF---------------------------- 219
           + +GI    V Y++M+ GY      D A  LF                            
Sbjct: 532 EEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNS 591

Query: 220 -------AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
                  + M EKN  P +ISY+ +I  Y       +A   F +M    +  + + YT L
Sbjct: 592 QGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVL 651

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD--------- 323
           + G C  G M E  ++  +M    I P D   +  LL      GHL              
Sbjct: 652 MNGYCKIGLMQEACELFAQMTSLGIKP-DIIAYTVLL-----DGHLKEDLQRRWQGISRD 705

Query: 324 ------------VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
                       +L +M  + I  +   Y +LI+  CK++  ++A  L D++++K     
Sbjct: 706 KRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQK----- 760

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIR 422
               L  +  +Y  +I   C  G+  KAE  F++++ KG+  D + F+ L R
Sbjct: 761 ---GLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVLNR 809



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 129/302 (42%), Gaps = 18/302 (5%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L P    + +V +      N   A   F  VE  G+ N +   +  M+      G  +
Sbjct: 499 RGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEV-LYSSMVCGYLHKGWTD 557

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
           +A  + L + K+G   D      LI    + G  Q +  +   M +      + SY  L 
Sbjct: 558 NAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLI 617

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
               + G    A+ +F+ M+  G+      Y V++ G+     ++ A   F  M S GI 
Sbjct: 618 SAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIK 677

Query: 194 LDVVTYNTMINGY------NRFKKMD----------EAEKLFAEMKEKNIEPTVISYTTM 237
            D++ Y  +++G+       R++ +           +  +L + MKE  IEP V  YT +
Sbjct: 678 PDIIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVL 737

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G    +  + A  +FDEM    + P+   YTAL+ G C  G++ + + + +EMV++ I
Sbjct: 738 IDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGI 797

Query: 298 PP 299
            P
Sbjct: 798 KP 799



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 19/218 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  ++ K+I    + G + +AR    DM ++G+  D  ++ VL+  Y K G++QE+ ++F
Sbjct: 609 DLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELF 668

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M  LG++  + +Y  L    L+     + +R+      +GI   + +         L 
Sbjct: 669 AQMTSLGIKPDIIAYTVLLDGHLKED---LQRRW------QGISRDKRS-------LLLR 712

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K     R    MK   I  DV  Y  +I+G  +   +++A  LF EM +K + P   +Y
Sbjct: 713 AKQN---RLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAY 769

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           T +I GY +      A  +F EM    +KP+ +T++ L
Sbjct: 770 TALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVL 807


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 211/469 (44%), Gaps = 15/469 (3%)

Query: 73  NHARCILL-DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           NH   IL  D P   V+ DE+    ++ +  KKG + E+ K+ DIM ++    +      
Sbjct: 5   NHGSSILFADGPL--VENDEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTN 62

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L + ++R GR   A R    M+  G+ P   TYN+M+ GF    +L +AI   EDM   G
Sbjct: 63  LIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSG 122

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
              DV+TYNT+I       K D+A + +     +   P +I YT +I+          AL
Sbjct: 123 CPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRAL 182

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            + ++M      P+ VTY +L+      GK  +   ++  ++   + P +   +  LL  
Sbjct: 183 EVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEP-NAITYNSLLHS 241

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            C  G  +   ++L  M + S P     Y ILI   CK  + +RAI    ++V +     
Sbjct: 242 LCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSE----- 296

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGN 429
                  +  +YN ++  LC  G   +A   F  L+      P  + +N +I G ++ G 
Sbjct: 297 ---NCSPDIITYNTLLTALCKEGMVDEALQVF-VLLSDSNCSPGLITYNTVIDGLTRRGY 352

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            D A ++   M  +G+  D   +  L+  +    +  DA   L  M +  H   SS +R 
Sbjct: 353 MDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRL 412

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           V+  L  + RV  A +V++ M+    K + ++ + +++++   G VEEA
Sbjct: 413 VINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEA 461



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 169/347 (48%), Gaps = 2/347 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N +   L      + A++F+R   R G   +    +  +IE++ +      A  +L DM
Sbjct: 130 YNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPY-LIPYTILIELVWKHCGTVRALEVLEDM 188

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             +G   D   +  L+    K+G  +++  I   +   G+E +  +Y++L   +   G +
Sbjct: 189 AIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLW 248

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
                    M      PT  TYN+++ G      +E AI FF  M S   S D++TYNT+
Sbjct: 249 DEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTL 308

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           +    +   +DEA ++F  + + N  P +I+Y T+I G       D+AL+++++M    +
Sbjct: 309 LTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGI 368

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+ +T+ +L+ G C   ++ +  ++LREM +R     ++S +  ++   C++  ++ A 
Sbjct: 369 APDGITHRSLVWGFCWIDQVEDAVEILREMGKRD-HRINSSAYRLVINGLCRNKRVDIAI 427

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
            VL+ MI      +   Y  LI++   A M + A +L  KL+E++++
Sbjct: 428 QVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIERKVL 474



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/449 (21%), Positives = 186/449 (41%), Gaps = 15/449 (3%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           T N +++   +   + EA KL   M   N  P     T +I+G V + R + A R+   M
Sbjct: 24  TNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTM 83

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               + P+ +TY  ++ G C   ++     +L +M     PP D   +  ++     +G 
Sbjct: 84  VMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPP-DVITYNTIIRSLFDNGK 142

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
            + A +  +  +R         Y ILIE   K     RA+++L+ +  +     P     
Sbjct: 143 FDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEG--CYP----- 195

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFE 435
            +  +YN ++      G+   A +    ++  G ++P  + +N+L+      G  D   E
Sbjct: 196 -DLVTYNSLVNFASKEGKYEDAALIIYNILSHG-MEPNAITYNSLLHSLCSCGLWDEVDE 253

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           I+ IM +   P     Y  LI    + G    A      M+ +  SP    + +++ +L 
Sbjct: 254 ILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALC 313

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           ++G V  A +V   + +      L     +++ L  RG+++EAL   + M++ G  P+  
Sbjct: 314 KEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGI 373

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
              SL+       +   AV++L     RD  I+ ++Y  V++ L    +   A  +L  +
Sbjct: 374 THRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMM 433

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           +      D +    LI  +   G  ++AD
Sbjct: 434 ISGRYKPDEEIYSTLIKSVADAGMVEEAD 462



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 3/192 (1%)

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           ++ +  +KG   +A   +D M      P S+   +++  L   GR++ ASRV+K+MV  G
Sbjct: 28  ILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSG 87

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           +  ++     ++     R  +  A+  ++ M  SG  P+   +++++  L + GK   AV
Sbjct: 88  LVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAV 147

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           +     L R C+  L  Y  +++ +     T+ A  +L  +  +G   D  + + L+   
Sbjct: 148 EFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFA 207

Query: 632 NQEGNTKQADIL 643
           ++EG  + A ++
Sbjct: 208 SKEGKYEDAALI 219


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 138/587 (23%), Positives = 258/587 (43%), Gaps = 55/587 (9%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D   +  +I      G+   A  +   M ++G +     + V++  YGK G+    +
Sbjct: 29  FEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKI 88

Query: 112 K-IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             +F+ MK  G+     +Y+ L     R   Y  A   F  M S G  P + TYN +L  
Sbjct: 89  TGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDV 148

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           +  S +++ AI    +M+  G S  +VTYN++I+ Y R   ++EA +L  +M E+ I+  
Sbjct: 149 YGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLD 208

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V +YT M+ G+V   + + A+R+F+EM++   KPN  T+ AL+    + GK  E+ KV  
Sbjct: 209 VFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           E+      P D   +  LL V  ++G  +  + V K M R+    E   Y  LI  + + 
Sbjct: 269 EIKICCCVP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRC 327

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL---- 406
             +D+A+ +  ++++  I      T D+  S+YN ++  L   G   ++E    ++    
Sbjct: 328 GSFDQAMAMYKRMLDTGI------TPDL--STYNAVLAALARGGLWEQSEKILAEMQDGM 379

Query: 407 ------------------------------MKKGVLDP--VAFNNLIRGHSKEG---NPD 431
                                         +  GV++P  V    L+  +SK       +
Sbjct: 380 CKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAE 439

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            AF  +K   R+G   D      +I  Y R+         L+ M E G +P+ + + S+M
Sbjct: 440 RAFLELK---RKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLM 496

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
               +    + +  V+K ++ KG+K ++     ++ A    G ++EA      M +SG +
Sbjct: 497 YMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLI 556

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           P+   +++ ++  +       A+ ++ + +   C  +  +Y  V+D 
Sbjct: 557 PDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDG 603



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/516 (22%), Positives = 213/516 (41%), Gaps = 32/516 (6%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
            F  ++ AG+   D  T+  +I    R      A  +  DM   G   D+  +  L++ Y
Sbjct: 91  LFEGMKNAGIL-PDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVY 149

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
           GK   ++E++++   M+  G   S+ +Y++L     R G    A    N+M+  GI+   
Sbjct: 150 GKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDV 209

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
            TY  ML GF  + K E+A+R FE+M++ G   ++ T+N +I  +    K  E  K+F E
Sbjct: 210 FTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEE 269

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           +K     P ++++ T++  +       +   +F EMK     P   TY  L+      G 
Sbjct: 270 IKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGS 329

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR-LSIPTEAGHY 340
             +   + + M++  I P D S +  +L    + G    +  +L  M   +  P E  H 
Sbjct: 330 FDQAMAMYKRMLDTGITP-DLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHC 388

Query: 341 GIL---------------IENFCKAEMYDRAIKLLDKLV------------EKEIILRPQ 373
            +L                E  C   +   A+ LL  LV            E+  +   +
Sbjct: 389 SLLHAYANGKEIGRMLALAEEICSGVIEPHAV-LLKTLVLVNSKCDLLLEAERAFLELKR 447

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDS 432
                + S+ N MI          K       + + G    +A +N+L+  HS+  N + 
Sbjct: 448 KGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFER 507

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           + E++K +  +G+  D  +Y  +I +Y R G   +A      M E G  P    + + + 
Sbjct: 508 SEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVA 567

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           S   D   + A  V+  M++ G K N +    +++ 
Sbjct: 568 SYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDG 603



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/428 (21%), Positives = 194/428 (45%), Gaps = 11/428 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  M+    R GK   A  +  +M   G + +   F  LI+ +G +G   E +K+F
Sbjct: 208 DVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVF 267

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + +K       + +++ L  +  + G        F +M   G  P R TYN ++  +   
Sbjct: 268 EEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRC 327

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
              + A+  ++ M   GI+ D+ TYN ++    R    +++EK+ AEM++   +P  +++
Sbjct: 328 GSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTH 387

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            +++  Y   +     L + +E+ S  ++P+AV    L+        ++E ++   E+  
Sbjct: 388 CSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKR 447

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           +   P D S    ++ +  +   +    ++L  M           Y  L+    ++E ++
Sbjct: 448 KGFSP-DLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFE 506

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
           R+ ++L +++ K I  +P      +  SYN +I   C NG+  +A   F ++ + G++ D
Sbjct: 507 RSEEVLKEILAKGI--KP------DIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPD 558

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + +N  +  ++ +   + A ++V  M + G   + + Y  +I+ Y +     DA   + 
Sbjct: 559 VITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFIS 618

Query: 474 SMIE-DGH 480
           S+ E D H
Sbjct: 619 SLHELDPH 626


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/507 (22%), Positives = 237/507 (46%), Gaps = 30/507 (5%)

Query: 7   TTRLQNKIRALVPQFDHNLVYNVLHGAKNS---EHALQFFRWVE-----RAGLFNHDRET 58
           T  L + ++ ++P    N + ++++   +S      L FF+W+      R  + ++   T
Sbjct: 51  TKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMT 110

Query: 59  HL----KMIE--------ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI 106
           H     KM+         ++ R GK + +      +  +G      +F VL+ +Y   G 
Sbjct: 111 HFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGY 170

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
             ++++ F ++++  ++    S   LF  +++      A  ++ ++L  G  P    +NV
Sbjct: 171 FSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNV 230

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++       K+  A   F ++  RG+   VV++NT+INGY +   +D+  +L   M E  
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           + P V +Y+ +I G     + DDA ++F EM    + PN VT+T L+ G C  G+     
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM 350

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           ++ ++M+ + + P D   +  L+   CK G L  A  ++  M +  +  +   Y +LI+ 
Sbjct: 351 EIYQQMLRKGVKP-DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK    + A+++  ++V++ I        +++  ++  +I   C  GQ  +AE   R++
Sbjct: 410 CCKEGDLESALEIRKEMVKEGI--------ELDNVAFTALISGFCREGQVIEAERTLREM 461

Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           ++ G+  D   +  +I G  K+G+  + F+++K M   G       Y  L+    ++G+ 
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVME 492
            +A   LD+M+  G  P    +  ++E
Sbjct: 522 KNANMLLDAMLNLGVVPDDITYNILLE 548



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 157/391 (40%), Gaps = 57/391 (14%)

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           +Y  +   LC    + E Q +L+ +V R      +SVF  +L  +  +   N    VL  
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEAR-GTHQSNLVFSVL-- 161

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIK------LLDKLVEKEIILRP-----QSTL 376
              ++  T++G++   I+ F     ++  I       L D+L++  +   P     +  L
Sbjct: 162 ---MNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLT-SPAWAFYEEIL 217

Query: 377 DM----EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNP 430
           D     +   +N ++  LC   +  +A++ F ++ K+G L P  V+FN LI G+ K GN 
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG-LRPTVVSFNTLINGYCKSGNL 276

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D  F + + M    V  D   Y  LI    ++G+  DA      M + G  P    F ++
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           +      GR      + + M+ KGVK ++     ++  L   G + EA   +  M Q G 
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 551 VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
            P                                D  +Y  ++D     G   +A  I  
Sbjct: 397 KP--------------------------------DKFTYTMLIDGCCKEGDLESALEIRK 424

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           +++++G   D  +   LI+G  +EG   +A+
Sbjct: 425 EMVKEGIELDNVAFTALISGFCREGQVIEAE 455


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 136/574 (23%), Positives = 250/574 (43%), Gaps = 61/574 (10%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K F  +K  G++    SY ++  ++ + GR   A+  F +M +E   P  + YN M+ G+
Sbjct: 4   KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + + E A +  E ++ RG    VV++N+++    + +K+DEA  LF  MK K+ EP  
Sbjct: 64  GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNS 122

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +Y  +I       R ++A RI DEM+   + PN +T   ++  LC A K+ E  K+   
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 182

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH------YGILIE 345
             +R   P D   +  L+    K G ++ A  + + M+      +AGH      Y  LI 
Sbjct: 183 ASQRGCNP-DCVTYCSLIDGLGKKGQVDEAYRLFEKML------DAGHNANPVVYTSLIR 235

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
           NF      +   K+  +L+ +    +P  TL       N  +  +   G+  K  + F  
Sbjct: 236 NFFIHGRKEDGHKIFKELIRRGC--KPDLTL------LNTYMDCVFKAGEVEKGRMIFED 287

Query: 406 LMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +   G L  V +++ LI G +K G       I   M ++G   DA AY  +++ + + G+
Sbjct: 288 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 347

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              A   L+ M E    P  + + ++++ L +  R+  A  + +    KG++ N+ L + 
Sbjct: 348 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 407

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD------ 575
           +++     G ++EA   ++ MM+ G  PN   ++SLL  L +  +   A+          
Sbjct: 408 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 467

Query: 576 ------------------------FCLGRD-----CIIDLASYEKVLDALLAAGKTLNAY 606
                                   F   +D      + ++ +Y  ++  L   G   +AY
Sbjct: 468 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 527

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           S+  +    GG+ D  S + LI G++      +A
Sbjct: 528 SLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/572 (21%), Positives = 256/572 (44%), Gaps = 15/572 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A +FF  ++  GL   D  ++  MI +L + G+L  A  +   M  +        +  +I
Sbjct: 2   AWKFFHELKAQGL-KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             YG  G  +++ K+ + +++ G   SV S++++   + ++ +   A   F  M  +  E
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-E 119

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TYN+++    L  ++E A R  ++M+   +  +++T N M++   + +K++EA K+
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F    ++   P  ++Y ++I G     + D+A R+F++M       N V YT+L+     
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G+  +  K+ +E++ R   P D ++    +    K+G +     + + +       +  
Sbjct: 240 HGRKEDGHKIFKELIRRGCKP-DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 298

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y ILI    KA        +   +         Q    ++A +YN ++   C +G+  K
Sbjct: 299 SYSILIHGLTKAGQARETSNIFHAM--------KQQGFALDARAYNAVVDGFCKSGKVHK 350

Query: 399 AEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A     ++ +K V   VA +  ++ G +K    D A+ + +    +G+  +   Y  LI+
Sbjct: 351 AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLID 410

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
            + + G   +A   L+ M++ G +P    + S++++L +   +  A    +SM E     
Sbjct: 411 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP 470

Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           N    + ++  L       +A      M + G VPN   + +++S L++ G    A  L 
Sbjct: 471 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 530

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
           +       I D AS+  +++ +  A + + AY
Sbjct: 531 ERFKANGGIPDAASFNALIEGMSNANRAMEAY 562



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 194/413 (46%), Gaps = 11/413 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N++ + L  A+  E A + F    + G  N D  T+  +I+ LG+ G+++ A  +   M 
Sbjct: 161 NIMVDRLCKARKLEEAYKIFESASQRGC-NPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 219

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
             G   +  ++  LI ++   G  ++  KIF  + + G +  +   +     + + G   
Sbjct: 220 DAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 279

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
             +  F  + S G  P   +Y++++ G   + +       F  MK +G +LD   YN ++
Sbjct: 280 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 339

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G+ +  K+ +A ++  EMKEK ++PTV +Y  ++ G   ++R D+A  +F+E KS  ++
Sbjct: 340 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 399

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N V Y++L+ G    G++ E   +L EM+++ + P +   +  LL    K+  +N A  
Sbjct: 400 LNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP-NVYTWNSLLDALVKAEEINEALV 458

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
             ++M  +  P     Y ILI   C+ + Y++A      + ++ ++  P         +Y
Sbjct: 459 CFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV--PNVV------TY 510

Query: 384 NPMIQHLCHNGQ-TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFE 435
             MI  L   G  T    +F R     G+ D  +FN LI G S       A++
Sbjct: 511 TTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/540 (23%), Positives = 239/540 (44%), Gaps = 57/540 (10%)

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           MA ++F+++ ++G++P   +Y  M+W    + +L  A   F  M++         YNTMI
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            GY    + ++A KL   ++E+   P+V+S+ +++       + D+AL +F+ MK  D +
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAE 119

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ------CKSGH 317
           PN+ TY  ++  LC  G++ E  ++L EM       +  S+F  LL V       CK+  
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEM-------EHASLFPNLLTVNIMVDRLCKARK 172

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE------------ 365
           L  A  + ++  +     +   Y  LI+   K    D A +L +K+++            
Sbjct: 173 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 232

Query: 366 ------------------KEIILR---PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
                             KE+I R   P  TL       N  +  +   G+  K  + F 
Sbjct: 233 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL------LNTYMDCVFKAGEVEKGRMIFE 286

Query: 405 QLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            +   G L  V +++ LI G +K G       I   M ++G   DA AY  +++ + + G
Sbjct: 287 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 346

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           +   A   L+ M E    P  + + ++++ L +  R+  A  + +    KG++ N+ L +
Sbjct: 347 KVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 406

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            +++     G ++EA   ++ MM+ G  PN   ++SLL  L +  +   A+         
Sbjct: 407 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM 466

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            C  +  +Y  +++ L    K   A+     + ++G V +  +   +I+GL + GN   A
Sbjct: 467 KCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDA 526



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/475 (22%), Positives = 201/475 (42%), Gaps = 52/475 (10%)

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A +FF ++K++G+  D V+Y +MI    +  ++ EAE+LFA+M+ +   P   +Y TMI 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY +  R +DA ++ + ++     P+ V++ ++L  L   GK  +V + L          
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCL---GKKRKVDEAL---------- 108

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
                   L  V  K    N++                  Y I+I+  C     + A ++
Sbjct: 109 -------SLFEVMKKDAEPNSST-----------------YNIIIDMLCLGGRVEEAYRI 144

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
           LD++          ++L     + N M+  LC   +  +A   F    ++G   D V + 
Sbjct: 145 LDEM--------EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 196

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           +LI G  K+G  D A+ + + M   G   +   Y  LI ++   G   D       +I  
Sbjct: 197 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 256

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P  +L  + M+ +F+ G V+    + + +   G   ++   + ++  L   G   E 
Sbjct: 257 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 316

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI-IDLASYEKVLD 594
                 M Q G   +   +++++    + GK   A ++L+  +   C+   +A+Y  ++D
Sbjct: 317 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE-MKEKCVQPTVATYGAIVD 375

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIR 648
            L    +   AY +  +   KG   +      LI G  + G   +A  IL  M++
Sbjct: 376 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMK 430


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 202/436 (46%), Gaps = 14/436 (3%)

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
           G +  ++++ + MK  G      ++  +   +   G    A  +   M   G +P   TY
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTY 60

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
             ++  F  + KLE A++  E+M+ RG   ++VTYN +++   +   +  A+ +  +M E
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
               P V+++ +++ G+      DDA ++   M +  ++PN VTY+AL+ GLC + K +E
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            ++VL EM    + P D   +  L+   CK+  +  A  +L+ M       +   Y  +I
Sbjct: 181 AKEVLEEMKASGVTP-DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             FCK+     A K L +       +R Q     +  +YN +I  LC  G+  +A++   
Sbjct: 240 HAFCKSGKLLEAQKTLQE-------MRKQRK-SPDVVTYNTVIDGLCKLGKIAEAQVILD 291

Query: 405 QLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           Q+ + G + P  V ++ +I G  K      A +++  M + G   D   Y  +I+   + 
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 351

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           G   +A+  L  M   G +P    + +++  L +  +V  A RVM+ M   G   NL   
Sbjct: 352 GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 411

Query: 523 AKILEALLMRGHVEEA 538
             ++  L + G ++EA
Sbjct: 412 NTMVNGLCVSGRIKEA 427



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/495 (23%), Positives = 222/495 (44%), Gaps = 54/495 (10%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F H  +   +  A + + A+   R +      + +  T+  +I    R  KL  A  +L 
Sbjct: 26  FTHTPIITAMANAGDLDGAMDHLRSMG----CDPNVVTYTALIAAFARAKKLEEAMKLLE 81

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M ++G   +   + VL+++  K  +V  +  +   M + G   +V ++++L     +RG
Sbjct: 82  EMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRG 141

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A++    M+++G+ P   TY+ ++ G   S K   A    E+MK+ G++ D  TY+
Sbjct: 142 NVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYS 201

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G  +  K++EAE++   M      P V+ Y+++I  +    +  +A +   EM+  
Sbjct: 202 ALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ 261

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
              P+ VTY  ++ GLC  GK+ E Q +L +M E                          
Sbjct: 262 RKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE-------------------------- 295

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           + DVL  ++          Y  +I   CK++M   A KLLD++         ++  + + 
Sbjct: 296 SGDVLPDVVT---------YSTVINGLCKSDMLVEAQKLLDRMC--------KAGCNPDV 338

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVK 438
            +Y  +I  LC  G+  +AE +  Q MK+    P  V +  LI G  K    D A  +++
Sbjct: 339 VTYTTIIDGLCKCGRLEEAE-YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 397

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH---SPASSLFRSVMESLF 495
            M   G P +   Y  ++      G   +A+  +  M +DG    SP ++ +R+++ +L 
Sbjct: 398 EMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM-KDGRAECSPDAATYRTIVNALM 456

Query: 496 EDGRVQTASRVMKSM 510
               VQ A ++++ M
Sbjct: 457 SSDLVQEAEQLLEQM 471



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 174/399 (43%), Gaps = 21/399 (5%)

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV--FMK 307
           AL + +EMKS    P+A T+T ++  + +AG +      LR M        D +V  +  
Sbjct: 9   ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM------GCDPNVVTYTA 62

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+    ++  L  A  +L+ M     P     Y +L++  CK  M   A  ++ K++E  
Sbjct: 63  LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE-- 120

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
                         ++N ++   C  G    A      ++ KG+  + V ++ LI G  K
Sbjct: 121 ------GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
                 A E+++ M   GV  DA  Y  LI    +  +  +A+  L  M   G +P   +
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           + S++ +  + G++  A + ++ M ++    ++     +++ L   G + EA   +D M 
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294

Query: 547 QSGSV-PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
           +SG V P+   + ++++ L +    + A KLLD      C  D+ +Y  ++D L   G+ 
Sbjct: 295 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRL 354

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
             A  +L  +   G   +  +   LI+GL +     +A+
Sbjct: 355 EEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAE 393



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 175/372 (47%), Gaps = 17/372 (4%)

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C+AG +    ++L EM      P D      ++     +G L+ A D L++M        
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAP-DAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPN 56

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI  F +A+  + A+KLL+++ E+     P + +     +YN ++  LC     
Sbjct: 57  VVTYTALIAAFARAKKLEEAMKLLEEMRERGC---PPNLV-----TYNVLVDALCKLSMV 108

Query: 397 GKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
           G A+   +++++ G    V  FN+L+ G  K GN D A +++ IM  +G+  +   Y  L
Sbjct: 109 GAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSAL 168

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+   +  +  +AK  L+ M   G +P +  + +++  L +  +++ A ++++ M   G 
Sbjct: 169 IDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 228

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             ++ + + I+ A    G + EA   +  M +    P+   +++++  L + GK   A  
Sbjct: 229 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV 288

Query: 573 LLD-FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           +LD      D + D+ +Y  V++ L  +   + A  +L ++ + G   D  +   +I GL
Sbjct: 289 ILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 348

Query: 632 NQEGNTKQADIL 643
            + G  ++A+ L
Sbjct: 349 CKCGRLEEAEYL 360



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 103/225 (45%), Gaps = 6/225 (2%)

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G+  +A E+++ M   G   DA  +  +I +    G   D   A+D +   G  P    +
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSMGCDPNVVTY 60

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            +++ +     +++ A ++++ M E+G   NL     +++AL     V  A   +  M++
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  PN   F+SL+    ++G    A KLL   + +    ++ +Y  ++D L  + K L 
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
           A  +L ++   G   D  +   LI GL +    ++A+ + R + G
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 225


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 221/512 (43%), Gaps = 37/512 (7%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ---LGVERSVKSYDALFK 134
           +L  MP+ G   D   + +L++ +  +   +E++++  +M          +V +Y  +  
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + +   +  A+  F +M+  G++P   TYN ++ G+    K +  ++  E M +RG+  
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D  TY +++N       + E       M E  + P    +      Y      D A+ IF
Sbjct: 276 DCYTYGSLLN---YLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIF 332

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           ++M+   + PN V Y AL+  LC  G++ + +    +M+   + P +  VF  L+   C 
Sbjct: 333 NKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTP-NIVVFNSLVYGLCT 391

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
                 A +++  M+   I   A  +  LI N C         +L+D +  + + +RP  
Sbjct: 392 VDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM--EHVGVRP-- 447

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDS 432
               +A SY P+I   C  G+T +AE  F  ++  G L P  V +N L+ G+      D 
Sbjct: 448 ----DAFSYTPLISGYCLAGRTDEAEKVFDGMVSIG-LSPTEVTYNTLLHGYCSASRIDD 502

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A+ + + M R+GV      Y  ++    +    ++AK    +MI  G       +  ++ 
Sbjct: 503 AYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILN 562

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
            L +   V  A ++ +S+  KG++ N+     ++ ALL  G  E+A+     +  +G VP
Sbjct: 563 GLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP 622

Query: 553 N-------------------FDSLLSVLSEKG 565
           N                   FDSL S + + G
Sbjct: 623 NVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 654



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/585 (22%), Positives = 253/585 (43%), Gaps = 36/585 (6%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +LI    + G ++ S   F ++ + G   +    + L K +    R   A     + +
Sbjct: 101 YSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRM 160

Query: 154 SE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS---RGISLDVVTYNTMINGYNRF 209
            E G  P   +Y+++L GF    + E A+     M +   R    +VVTY T+I+G  + 
Sbjct: 161 PELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKA 220

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
           +  D AE +F +M +  ++P   +Y  +I GY+++ +  + +++ ++M +  +KP+  TY
Sbjct: 221 QLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTY 280

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
            +LL  LC    + E+   L  MVE  + P D+ +F        K G ++ A D+   M 
Sbjct: 281 GSLLNYLC---ALSEMHSFLDLMVENGLSP-DHHIFNIFFSAYAKCGMIDKAMDIFNKMR 336

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           +  +     +YG LI+  CK    D A    ++++ + +   P   +      +N ++  
Sbjct: 337 QHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT--PNIVV------FNSLVYG 388

Query: 390 LCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC   +  +AE    +++ +G+  + V FN LI      G       ++ +M   GV  D
Sbjct: 389 LCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPD 448

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
           A +Y  LI  Y   G   +A+   D M+  G SP    + +++       R+  A  + +
Sbjct: 449 AFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFR 508

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS---VPNFDSLLSVLSEKG 565
            M+ KGV   +     IL  L       EA      M+ SG+   +  ++ +L+ L +  
Sbjct: 509 EMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSN 568

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD----- 620
               A K+      +   +++ ++  ++ ALL  G+  +A  +   I   G V +     
Sbjct: 569 CVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYR 628

Query: 621 -----------WKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
                       +  D L + + + G    + +L+ ++R  + RG
Sbjct: 629 LVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 673



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 198/436 (45%), Gaps = 20/436 (4%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G+  D  +F +   +Y K G++ +++ IF+ M+Q G+  +V +Y AL   + + GR
Sbjct: 300 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 359

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A+  FN+M++EG+ P    +N +++G     K E A     +M  +GI  + V +NT
Sbjct: 360 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 419

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I       ++ E  +L   M+   + P   SYT +I GY    R D+A ++FD M S  
Sbjct: 420 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIG 479

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP---KDNSVFMKLLGVQCKSGHL 318
           + P  VTY  LL G C A ++ +   + REM+ + + P     N++   L     ++   
Sbjct: 480 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF----QTKRF 535

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
           + A ++   MI      +   Y I++   CK+   D A K+   L  K         L +
Sbjct: 536 SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSK--------GLQL 587

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGH-SKEGNPDSAFEIV 437
              ++  MI  L   G+   A   F  +   G++  V    L+  +  +EG+ +    + 
Sbjct: 588 NIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLF 647

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
             M + G   ++     L+   L +G+ + A   L  + E   S  +S   S++ S+F  
Sbjct: 648 SAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST-TSLLISIFTS 706

Query: 498 GRVQTASRVMKSMVEK 513
              Q  +   KS+ EK
Sbjct: 707 DEYQHHA---KSLPEK 719



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/542 (22%), Positives = 218/542 (40%), Gaps = 87/542 (16%)

Query: 36  SEHALQFFRWVERAGLFNHDRE------THLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
           +E AL+  R +      +H R       T+  +I+ L +    + A  +   M   GV+ 
Sbjct: 185 AEEALELLRMMAN----DHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKP 240

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL----------------- 132
           + D +  LI  Y   G  +E V++ + M   G++    +Y +L                 
Sbjct: 241 NNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLM 300

Query: 133 ---------------FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
                          F    + G    A   FNKM   G+ P    Y  ++       ++
Sbjct: 301 VENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRV 360

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A   F  M + G++ ++V +N+++ G     K + AE+L  EM ++ I P  + + T+
Sbjct: 361 DDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 420

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I     V R  +  R+ D M+   V+P+A +YT L+ G C AG+  E +KV   MV    
Sbjct: 421 ICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVS--- 477

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
                                          I LS PTE   Y  L+  +C A   D A 
Sbjct: 478 -------------------------------IGLS-PTEV-TYNTLLHGYCSASRIDDAY 504

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            L  +++ K +   P         +YN ++  L    +  +A+  +  ++  G   D   
Sbjct: 505 CLFREMLRKGVT--PGVV------TYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 556

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N ++ G  K    D AF++ + +  +G+  +   +  +I + L+ G   DA     ++ 
Sbjct: 557 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 616

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
            +G  P    +R V E+L E+G ++    +  +M + G   N  ++  ++  LL RG + 
Sbjct: 617 ANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDIS 676

Query: 537 EA 538
            A
Sbjct: 677 RA 678



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 138/304 (45%), Gaps = 7/304 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L  VG++   R ++  M   GV+ D   +  LI  Y   G   E+ K+FD M  +G
Sbjct: 420 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIG 479

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +  +Y+ L        R   A   F +ML +G+ P   TYN +L G F + +   A 
Sbjct: 480 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAK 539

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             + +M + G   D+ TYN ++NG  +   +DEA K+F  +  K ++  +I++T MI   
Sbjct: 540 ELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 599

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           +   R +DA+ +F  + +  + PN VTY  +   L + G + E   +   M +    P  
Sbjct: 600 LKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNS 659

Query: 302 ---NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
              N++  +LL      G ++ A   L  +   +   EA    +LI  F   E    A  
Sbjct: 660 QMLNALVRRLL----HRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKS 715

Query: 359 LLDK 362
           L +K
Sbjct: 716 LPEK 719



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 192/450 (42%), Gaps = 30/450 (6%)

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD-----------ALRIFDEM--- 257
           +D+A KLF E+       +V+++  ++       RA              + +F+ M   
Sbjct: 30  LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVRE 89

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  V PN  TY+ L+  LC  G++         +++      D  V  +LL   C    
Sbjct: 90  CSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVND-IVINQLLKGLCDGKR 148

Query: 318 LNAAADV-LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
           +  A DV L+ M  L    +   Y IL++ FC     + A++LL  +        P + +
Sbjct: 149 VGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVV 208

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                +Y  +I  LC      +AE  F+Q++  GV  +   +N LI G+   G      +
Sbjct: 209 -----TYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQ 263

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +++ M  RG+  D   Y  L+ +YL     ++  + LD M+E+G SP   +F     +  
Sbjct: 264 MLEKMSARGLKPDCYTYGSLL-NYL--CALSEMHSFLDLMVENGLSPDHHIFNIFFSAYA 320

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           + G +  A  +   M + G+  N+     +++AL   G V++A  + + M+  G  PN  
Sbjct: 321 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 380

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F+SL+  L    K   A +L+   L +    +   +  ++  L   G+ +     L  +
Sbjct: 381 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRR-LIDL 439

Query: 613 MEKGGV-TDWKSSDKLIAGLNQEGNTKQAD 641
           ME  GV  D  S   LI+G    G T +A+
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAE 469


>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
 gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 547

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 199/417 (47%), Gaps = 25/417 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL FF W E+   F ++ E++  +IE LG++ +    R ++ +M  + +  ++D F ++ 
Sbjct: 140 ALSFFTWAEKQKGFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKL-LNKDTFALIS 198

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             + +   V+E+++ F+ M++ G +     ++ L   + +      A + F+KM      
Sbjct: 199 RRHARARKVEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFV 258

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   +Y ++L G+     L      + +MK  G   DVVTY  +I+ Y + KK D A +L
Sbjct: 259 PDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIEL 318

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F EM+ KN +PT   Y T+I G  + +R  +AL  F+  KS    P A TY +L+   C 
Sbjct: 319 FHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCW 378

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEA 337
           + ++ +  +V+ EM +    P   +  + L        HL  A    +A  R   +  E 
Sbjct: 379 SMRIDDAFQVIDEMRKHSAGPNSRTYDIIL-------HHLIKARRTNEAYFRFQKMSNEP 431

Query: 338 G------HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
           G       Y I++  FC  +  D A ++ D++  K ++  P   +      Y+ +I  LC
Sbjct: 432 GCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVL--PGMHM------YSDLITSLC 483

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIV-KIMGRRGVP 446
           H  + G+A  +F++++  G+  P   F+NL +    EG  D A  +  KI   RG P
Sbjct: 484 HKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEALNLARKINKLRGTP 540



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/423 (20%), Positives = 182/423 (43%), Gaps = 43/423 (10%)

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           KQ G + + +SY+AL + + +  ++ + +   N+M S  +   + T+ ++      + K+
Sbjct: 149 KQKGFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKL-LNKDTFALISRRHARARKV 207

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E AI  FE M+  G  L+   +N +++   + + +++A K+F +MK++   P + SYT +
Sbjct: 208 EEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTIL 267

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           ++G+           ++ EMK    +P+ VTY  L+   C A K     ++  EM  +  
Sbjct: 268 LEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNC 327

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P  + V+  L+        L+ A +  +         EA  Y  L+  +C +   D A 
Sbjct: 328 KPTPH-VYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAF 386

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF 417
           +++D++         + +    + +Y+ ++ HL    +T +A   F+++  +   +P   
Sbjct: 387 QVIDEMR--------KHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTV- 437

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
                         S +EI+                  +  +  +     AK   D M  
Sbjct: 438 --------------STYEII------------------VRMFCNEDRVDLAKQVWDQMKA 465

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G  P   ++  ++ SL    ++  A +  + M++ G++    + + + +ALL  G  +E
Sbjct: 466 KGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDE 525

Query: 538 ALG 540
           AL 
Sbjct: 526 ALN 528


>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 142/578 (24%), Positives = 251/578 (43%), Gaps = 59/578 (10%)

Query: 8   TRLQNKIRALVPQFDHNLVYNVLHGAKNSEH---ALQFFRWVERAGLFNHDRETHLKMIE 64
           + L    R  + +   N V  VL   +  E    A  FF W  +   + H+ E ++ +++
Sbjct: 101 SNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVD 160

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           +L     ++  R I  ++ K            LI+S+GK G+V+E + ++  MK+ G+  
Sbjct: 161 VLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGI-- 218

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
                                            EPT +TYN ++ G   ++ +++A R F
Sbjct: 219 ---------------------------------EPTLYTYNFLMNGLVSAMFVDSAERVF 245

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           E M+S  I  DVVTYNTMI GY +  +  +A +    M+ K +E   I+Y TMI+   A 
Sbjct: 246 EVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYAD 305

Query: 245 ERADDALRIFDEM--KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                 + ++ EM  K   V P+A  ++ ++ GLC  GK+ E   V   M+ +   P + 
Sbjct: 306 SDFSSCVALYQEMDEKGLQVPPHA--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKP-NV 362

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           +++  L+    K+G +  A  +L  MI      +   Y +++   CK    + A+     
Sbjct: 363 AIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQT 422

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
                      + L + +  Y+ +I  L   G+  +AE  F ++ +KG   D   +N LI
Sbjct: 423 C--------RFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALI 474

Query: 422 RGHSKEGNPDSAFEIVKIM-GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
              +K G  D A  + K M    G  +    Y  LI    ++    +A    D MI+ G 
Sbjct: 475 DAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGI 534

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK-ILEALLMRGHVEEAL 539
           +P ++  R++   L   G+V  A +++  +   GV   LD   + ++  L   G ++EA 
Sbjct: 535 TPTAACLRALSTGLCLSGKVARACKILDELAPMGVI--LDAACEDMINTLCKAGRIKEAC 592

Query: 540 GRIDLMMQSG-SVPN--FDSLLSVLSEKGKTIAAVKLL 574
              D + + G  VP      +++ L + GK   A+KL+
Sbjct: 593 KLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 630



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/471 (22%), Positives = 192/471 (40%), Gaps = 85/471 (18%)

Query: 176 KLETAIRFF-EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           K + A  FF    K +  + ++  Y ++++     K +D    + +E+++     TV   
Sbjct: 131 KPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPG 190

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            ++IK +  +   ++ L ++ +MK   ++P   TY  L+ GL  A  +   ++V   M  
Sbjct: 191 NSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
             I P                       DV+              Y  +I+ +CKA    
Sbjct: 251 GRIKP-----------------------DVVT-------------YNTMIKGYCKAGQTQ 274

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEAS--SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
           +A+       EK   LR   T  +EA   +Y  MIQ    +         ++++ +KG+ 
Sbjct: 275 KAL-------EK---LRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQ 324

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
           + P AF+ +I G  KEG  +  + + + M R+G   +   Y  LI+ Y + G   DA   
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRL 384

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           L  MI++G +P    +  V+  L ++GRV+ A    ++    G+  N    + +++ L  
Sbjct: 385 LHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGK 444

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
            G V+EA                + L   +SEKG                C  D   Y  
Sbjct: 445 AGRVDEA----------------ERLFEEMSEKG----------------CTRDSYCYNA 472

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWK--SSDKLIAGLNQEGNTKQA 640
           ++DA    GK   A + LFK ME+    D    +   LI+G+ +E   ++A
Sbjct: 473 LIDAFTKHGKVDEALA-LFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEA 522


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 136/571 (23%), Positives = 249/571 (43%), Gaps = 51/571 (8%)

Query: 25  LVYNVLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC---- 77
           LVYN+  G+  S   + +      VE+A          L +  +L +V   N ARC    
Sbjct: 385 LVYNIFIGSVCSNEEQPSSDILDLVEKA------YSEMLDLGVVLNKVNVSNFARCLCGA 438

Query: 78  --------ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
                   I+ +M  KG   D+  +  +I        V+++  +F+ MK+ G+  SV +Y
Sbjct: 439 GKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTY 498

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             L     + G    A+++F++ML +G  P   TY  ++  +  + ++  A   FE M  
Sbjct: 499 TILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLL 558

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK---------------EKNIE-PTVIS 233
            G   +VVTY  +I+G+ +  ++++A +++A M+                 N E P VI+
Sbjct: 559 EGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVIT 618

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y  ++ G     R  +A  + D M +   +PN + Y A++ G C  GK+ + Q+V  +M 
Sbjct: 619 YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMS 678

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           ER   P +   +   +    K   L+    VL  M+  S       Y  +++  CK    
Sbjct: 679 ERGYSP-NLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKT 737

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           D A KL+ K+ EK          +    +Y  MI     +G+  +    FR +  KG   
Sbjct: 738 DEAYKLMLKMEEK--------GCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAP 789

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           + + +  LI      G  D A++++  M +   P+   ++  +IE + +  E   +   L
Sbjct: 790 NFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ--EFITSIGLL 847

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK--SMVEKGVKENLDLVAKILEALL 530
           D + E+   P  SL+R ++++  + GR++ A  +++  S        N  L A ++E L 
Sbjct: 848 DELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLS 907

Query: 531 MRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
               V++AL     M+    VP    L+ ++
Sbjct: 908 HASKVDKALELYASMISKNVVPELSILVHLI 938



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 156/723 (21%), Positives = 280/723 (38%), Gaps = 105/723 (14%)

Query: 14  IRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILG-RVGKL 72
            R    Q + +LV  V++  KN E  ++FF W  R   ++H  +   K++++LG  V   
Sbjct: 97  FRQFRNQLNDSLVVEVMNNVKNPELCVKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNAD 156

Query: 73  NHARC-ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           +      L+++     +    +   L+    + G    +++    +K  G + S  +Y+A
Sbjct: 157 DRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNA 216

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT---------------------------- 163
           L ++ LR  +   A     +MLS      R+T                            
Sbjct: 217 LIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFV 276

Query: 164 -----YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY------------------- 199
                YN M+ G   +   E A+     M+S     +VVTY                   
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336

Query: 200 ----------------NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
                           N++I+ Y + +    A KLF +M +   +P  + Y   I    +
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCS 396

Query: 244 VER--ADDAL----RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
            E   + D L    + + EM    V  N V  +     LC AGK  +  K++ EM+ +  
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGF 456

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D+S + K++G  C +  +  A  + + M R  I      Y ILI++FCKA +  +A 
Sbjct: 457 VP-DDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQAR 515

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
           K  D+++ K     P         +Y  +I       Q   A+  F  ++ +G   + V 
Sbjct: 516 KWFDEMLHKGCT--PNVV------TYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVT 567

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI------C----------LIESYL 460
           +  LI GH K G  + A +I   M       D D Y       C          L++   
Sbjct: 568 YTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLC 627

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           +     +A   LD+M+  G  P   ++ +V++   + G++Q A  V   M E+G   NL 
Sbjct: 628 KANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLY 687

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
             +  ++ L     ++  L  +  M+++   PN   +  ++  L + GKT  A KL+   
Sbjct: 688 TYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKM 747

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
             + C  ++ +Y  ++D    +GK      +   +  KG   ++ +   LI      G  
Sbjct: 748 EEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLL 807

Query: 638 KQA 640
            +A
Sbjct: 808 DEA 810



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/590 (20%), Positives = 235/590 (39%), Gaps = 73/590 (12%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D   +  ++    +  + +E++ I   M+      +V +Y  L    LR+G+    KR  
Sbjct: 278 DTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRIL 337

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN----- 204
           + M++EG  P R  +N ++  +  S     A + F+ M   G     + YN  I      
Sbjct: 338 SMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSN 397

Query: 205 --------------GYNRF----------------------KKMDEAEKLFAEMKEKNIE 228
                          Y+                         K D+A K+  EM  K   
Sbjct: 398 EEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFV 457

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P   +Y+ +I       + + A  +F+EMK   + P+  TYT L+   C AG + + +K 
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             EM+ +   P +   +  L+    K+  +  A ++ + M+          Y  LI+  C
Sbjct: 518 FDEMLHKGCTP-NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           KA   ++A ++  ++             D+E+S  +   + L HN   G           
Sbjct: 577 KAGQIEKACQIYARMRG-----------DIESSDMDKYFK-LDHNNCEGP---------- 614

Query: 409 KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
               + + +  L+ G  K      A E++  M   G   +   Y  +I+ + + G+  DA
Sbjct: 615 ----NVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDA 670

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           +     M E G+SP    + S ++ LF+D R+    +V+  M+E     N+ +  ++++ 
Sbjct: 671 QEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDG 730

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL-DFCLGRDCII 584
           L   G  +EA   +  M + G  PN   + +++    + GK    ++L  D C  + C  
Sbjct: 731 LCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMC-SKGCAP 789

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           +  +Y  +++   + G    AY +L ++ +        S  K+I G +QE
Sbjct: 790 NFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE 839



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 125/531 (23%), Positives = 208/531 (39%), Gaps = 73/531 (13%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           +RE    +I    +    ++A  +   M K G Q    ++ + I S       Q S  I 
Sbjct: 348 NREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNE-EQPSSDIL 406

Query: 115 DI-------MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
           D+       M  LGV  +  +     + +   G++  A +   +M+ +G  P   TY+ +
Sbjct: 407 DLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKV 466

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           +     + K+E A   FE+MK  GI   V TY  +I+ + +   + +A K F EM  K  
Sbjct: 467 IGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGC 526

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            P V++YT +I  Y+  ++   A  +F+ M     KPN VTYTAL+ G C AG++ +  +
Sbjct: 527 TPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQ 586

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           +   M    I   D   + KL    C+  ++                     YG L++  
Sbjct: 587 IYARM-RGDIESSDMDKYFKLDHNNCEGPNVIT-------------------YGALVDGL 626

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           CKA     A +LLD                        M+ H C   Q            
Sbjct: 627 CKANRVKEAHELLDT-----------------------MLAHGCEPNQ------------ 651

Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
                  + ++ +I G  K G    A E+   M  RG   +   Y   I+   +      
Sbjct: 652 -------IVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDL 704

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
               L  M+E+  +P   ++  +++ L + G+   A ++M  M EKG   N+     +++
Sbjct: 705 VLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMID 764

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLD 575
                G +E+ L     M   G  PNF +   L++     G    A KLLD
Sbjct: 765 GFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLD 815



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 155/332 (46%), Gaps = 12/332 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  L++   K   V+E+ ++ D M   G E +   YDA+     + G+   A+  F KM 
Sbjct: 619 YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMS 678

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P  +TY+  +   F   +L+  ++    M     + +VV Y  M++G  +  K D
Sbjct: 679 ERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTD 738

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA KL  +M+EK   P V++YT MI G+    + +  L +F +M S    PN +TY  L+
Sbjct: 739 EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLI 798

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI-RLS 332
              C  G + E  K+L EM + Y P    S    + G    S     +  +L  +    S
Sbjct: 799 NHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF---SQEFITSIGLLDELSENES 855

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +P ++  Y ILI+N+ KA   + A+ LL+     EI   P   +      Y  +I++L H
Sbjct: 856 VPVDS-LYRILIDNYIKAGRLEVALDLLE-----EISSSPSHAVS-NKYLYASLIENLSH 908

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRG 423
             +  KA   +  ++ K V+  ++   +LI+G
Sbjct: 909 ASKVDKALELYASMISKNVVPELSILVHLIKG 940



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 6/213 (2%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           N +  T+  MI+  G+ GK+     +  DM  KG   +   + VLI      G++ E+ K
Sbjct: 753 NPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYK 812

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + D MKQ    + + S+  + +   +   ++ +    +++      P    Y +++  + 
Sbjct: 813 LLDEMKQTYWPKHILSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYI 870

Query: 173 LSLKLETAIRFFEDMKS---RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
            + +LE A+   E++ S     +S +   Y ++I   +   K+D+A +L+A M  KN+ P
Sbjct: 871 KAGRLEVALDLLEEISSSPSHAVS-NKYLYASLIENLSHASKVDKALELYASMISKNVVP 929

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            +     +IKG + V++  +AL++ D +   D+
Sbjct: 930 ELSILVHLIKGLIKVDKWQEALQLSDSICQMDI 962


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 211/454 (46%), Gaps = 11/454 (2%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G +     +  L++ Y + G+++++ ++   M       S  +++ L   +  RGR   A
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
               + ML  G  P   TYN++L           A+   + M++ G   + VTYN +I+ 
Sbjct: 183 LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             R   +D+A +L   +  +  +P  ++Y T++KG+ ++ER  DA  I DEM   +  PN
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPN 302

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
             T   ++  LC  G + +V   L +M  ++    +   +  ++   C+ G++++A ++L
Sbjct: 303 EATLNVIINTLCRKGLLQKVTLYLEKM-SKHGCTANVVTYNAVISGMCEQGNVDSALELL 361

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             M       +   Y  +++  C A+ ++ A +L+ K+ + + +         + S++N 
Sbjct: 362 SNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL--------PDNSTFNT 413

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I   C  G   +A   F+Q+ +KG   +   ++ +I G +K G  + A E++  M  +G
Sbjct: 414 IISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG 473

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
              D   Y  L ES  ++ +  +    +  + + G SP + L+ +V+  L  +G+   A 
Sbjct: 474 FNTD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAI 532

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
            V+  MV  G   +      ++E L   G+ +EA
Sbjct: 533 DVLADMVSCGCMPDESTYIILIEGLFYEGYSKEA 566



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/470 (22%), Positives = 204/470 (43%), Gaps = 14/470 (2%)

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           +++  G E +  +Y AL     R G    A+R    M +     + + +N ++       
Sbjct: 118 VVEACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERG 177

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           ++  A+   + M  RG + DVVTYN ++    + +   +A +L   M+ +  EP  ++Y 
Sbjct: 178 RVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYN 237

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I         D A  + + + S   KPN V Y  +L G C   + V+  ++L EMV  
Sbjct: 238 VIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRE 297

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
             PP + ++ + ++   C+ G L      L+ M +         Y  +I   C+    D 
Sbjct: 298 NCPPNEATLNV-IINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDS 356

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A++LL  +  +    +P      +  +YN +++ LC   +   AE    ++ +   L D 
Sbjct: 357 ALELLSNM--QSFGCKP------DIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDN 408

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             FN +I    ++G    AFE+ K M  +G   ++  Y  +I    + G+   A   L+ 
Sbjct: 409 STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M   G +    ++R + ESL ++ +++   +V+  + + G+     L   +L  L   G 
Sbjct: 469 MANKGFN-TDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGK 527

Query: 535 VEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRD 581
            + A+  +  M+  G +P+  +   L+  L  +G +  A +LL     RD
Sbjct: 528 TDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRD 577



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 211/491 (42%), Gaps = 38/491 (7%)

Query: 180 AIRFFEDMKSRGISLDVV-------------TYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           A R   D+  RG   D               TY  +++GY R   +++A ++   M    
Sbjct: 99  ANRLVRDLCRRGRPADAARVVEACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHV 158

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
              +  ++  +I       R  DAL + D M      P+ VTY  LL   C      +  
Sbjct: 159 QASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQAL 218

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           +++  M      P +N  +  ++   C+ G ++ A ++L ++          +Y  +++ 
Sbjct: 219 ELIDFMRAEGCEP-NNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 277

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
           FC  E +  A ++LD++V +E     ++TL       N +I  LC  G   K  ++  ++
Sbjct: 278 FCSIERWVDADEILDEMV-RENCPPNEATL-------NVIINTLCRKGLLQKVTLYLEKM 329

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            K G   + V +N +I G  ++GN DSA E++  M   G   D   Y  +++        
Sbjct: 330 SKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRW 389

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            DA+  +  M ++   P +S F +++    + G +  A  V K M EKG   N    + I
Sbjct: 390 EDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTI 449

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE---KGKTIAAV-----KLLDFC 577
           +  L   G +E+AL  ++ M   G   N D +  VL+E   K   I  V     KL D  
Sbjct: 450 IGGLTKAGKMEQALELLNEMANKGF--NTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSG 507

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
           +    ++    Y  VL  L   GKT  A  +L  ++  G + D  +   LI GL  EG +
Sbjct: 508 ISPQTVL----YNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYS 563

Query: 638 KQA-DILSRMI 647
           K+A ++LSR+ 
Sbjct: 564 KEARELLSRLC 574



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 181/419 (43%), Gaps = 11/419 (2%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           H  +I  L   G++  A  +L  M  +G   D   + +L+++  K    ++++++ D M+
Sbjct: 166 HNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMR 225

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
             G E +  +Y+ +   + R G    A+   N + S G +P    YN +L GF    +  
Sbjct: 226 AEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWV 285

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A    ++M       +  T N +IN   R   + +      +M +      V++Y  +I
Sbjct: 286 DADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVI 345

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G       D AL +   M+SF  KP+ VTY  +L GLC A +  + ++++ +M +    
Sbjct: 346 SGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL 405

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P DNS F  ++   C+ G +  A +V K M        +  Y  +I    KA   ++A++
Sbjct: 406 P-DNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALE 464

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
           LL+++  K       +T  M    Y  + + L    +  +      +L   G+    V +
Sbjct: 465 LLNEMANKGF-----NTDKM----YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLY 515

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           N ++ G  + G  D A +++  M   G   D   YI LIE    +G   +A+  L  + 
Sbjct: 516 NTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLC 574



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 2/245 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V + +    N + AL+    ++  G    D  T+  +++ L    +   A  +++ M
Sbjct: 341 YNAVISGMCEQGNVDSALELLSNMQSFGC-KPDIVTYNTVLKGLCSADRWEDAEELMIKM 399

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            +     D   F  +I  + +KG++ ++ ++F  M + G   +  +Y  +   + + G+ 
Sbjct: 400 SQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKM 459

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A    N+M ++G   T   Y V+        K+E  ++    ++  GIS   V YNT+
Sbjct: 460 EQALELLNEMANKGFN-TDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTV 518

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           + G  R  K D A  + A+M      P   +Y  +I+G      + +A  +   + S DV
Sbjct: 519 LLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDV 578

Query: 263 KPNAV 267
             N++
Sbjct: 579 LSNSL 583



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 10/225 (4%)

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G+ D+A  +V   G    P D      L+    R+G PADA   +++    G    ++ +
Sbjct: 78  GDLDAALRLV---GSSPRPPDVPLANRLVRDLCRRGRPADAARVVEAC---GPEATAATY 131

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++++     G ++ A RV+  M       +      ++ AL  RG V +AL  +D M+ 
Sbjct: 132 GALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLC 191

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
            G  P+   ++ LL    +      A++L+DF     C  +  +Y  ++DA+   G    
Sbjct: 192 RGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQ 251

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIR 648
           A  +L  +  +G   +  + + ++ G         AD IL  M+R
Sbjct: 252 ARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVR 296


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 136/609 (22%), Positives = 258/609 (42%), Gaps = 41/609 (6%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           D  +V  VL    +SE A++F+ W E    F+H +     ++ +L            L  
Sbjct: 92  DPFVVNRVLRSISDSEMAVRFYWWAESRPGFDHTQFAIAYVVSLLFVDSNFFLLSEFLER 151

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           +  +GV     ++ +L+  Y + G     +  FD M   G       Y+    ++++   
Sbjct: 152 VRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCC 211

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           + + ++Y++  L +G   T  TY+  +     S ++E   R   DM   G   D+   N 
Sbjct: 212 FDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNI 271

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            ++   +  ++ +A K    M  +   P V++YTT++      ++  +A+ +++EM    
Sbjct: 272 YVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRG 331

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           +KP+ V    L+ GLC + K+ E  ++   M+   +   +  ++  L+    +SG +N A
Sbjct: 332 LKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNL-ELNVCIYNALISGFLRSGSINKA 390

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             ++  M       +   Y I + ++C   M   A KL++++ E   I+ P      +  
Sbjct: 391 FKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEM-EMSGIVNP------DRY 443

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           SYN M++ LC   Q  +A  F    M+  G  D V+ N LI    K     SA ++ K M
Sbjct: 444 SYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEM 503

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
           G +G+  DA  Y  LI      G    A+   + M++    P  +L+  ++ +L + G+ 
Sbjct: 504 GYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQF 563

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
           + A ++   M++K V                                S  +  F++L+  
Sbjct: 564 EQAQKIFLQMIQKEV--------------------------------SPDIITFNTLIYW 591

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           L +  + I A+ L      R    D  ++  ++  LL  GK   AY +   ++E G + D
Sbjct: 592 LGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGIILD 651

Query: 621 WKSSDKLIA 629
              SD+LI+
Sbjct: 652 RDVSDRLIS 660


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 140/610 (22%), Positives = 254/610 (41%), Gaps = 91/610 (14%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           ++  +  LVP    N++ +V+    N +   +FF W  R           L +I++L   
Sbjct: 47  IEPALEPLVPFLSKNIITSVIKEEVNRQLGFRFFIWASRRERLRSGESFGL-VIDMLSED 105

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
              +     L ++   GV  D   F VLI +Y K G+ +++V+ F  MK+      V +Y
Sbjct: 106 NGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTY 165

Query: 130 DALFKLILRRGR-YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           + + ++++R    +M+A   +N+ML     P  +T+ +++ G +   +   A + F+DM 
Sbjct: 166 NVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMT 225

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS--------------- 233
            RGIS + VTY  +I+G  +    ++A KLF EMK     P  ++               
Sbjct: 226 GRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMV 285

Query: 234 --------------------YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
                               Y+++I G     R   A  ++  M   ++KP+ + YT L+
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILI 345

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GL  AGK+ +  K+LR M  + I P D   +  ++   C  G L     +   M     
Sbjct: 346 QGLSKAGKIEDALKLLRSMPSKGITP-DTYCYNAVIKALCGRGLLEEGRSLQLEMSETES 404

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR-PQSTLDMEASSYNPMIQHLCH 392
             +A  + ILI + C+  +  +A         +EI L   +S      +++N +I  LC 
Sbjct: 405 FPDACTHTILICSMCRNGLVRKA---------EEIFLEIEKSGCSPSVATFNALIDGLCK 455

Query: 393 NGQTGKAEIF-----------------------FRQLMKKGVL----------------- 412
           +G+  +A +                        F  +++ G +                 
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSP 515

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D V++N LI G  +EG+ D A +++ ++  +G+  D+  Y  LI    R G   +A    
Sbjct: 516 DIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
            +  +  HSPA  ++RS+M       ++  A  +    ++K +    D  A  +E     
Sbjct: 576 YAKDDFRHSPA--VYRSLMTWSCRRRKLLVAFNLWMKYLKK-ISCLDDETANEIEQCFKE 632

Query: 533 GHVEEALGRI 542
           G  E AL R+
Sbjct: 633 GETERALRRL 642



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 212/498 (42%), Gaps = 33/498 (6%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           +R T+  +I  L + G    AR +  +M   G   D      L++ + K G + E+ ++ 
Sbjct: 232 NRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELL 291

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
            + ++ G    ++ Y +L   + R  RY  A   +  ML   I+P    Y +++ G   +
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKA 351

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K+E A++    M S+GI+ D   YN +I        ++E   L  EM E    P   ++
Sbjct: 352 GKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           T +I           A  IF E++     P+  T+ AL+ GLC +G++ E + +L +M  
Sbjct: 412 TILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME- 470

Query: 295 RYIPPKDNSVFMKLLGVQCKS-GHLNAAADVLKAMIRLSIPTEAGH------YGILIENF 347
                +  S+F++L     +S   +  +  +LKA   L+   + G+      Y +LI  F
Sbjct: 471 ---VGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGF 527

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           C+    D A+KLL+ L  K   L P S       +YN +I  L    + G+ E  F+   
Sbjct: 528 CREGDIDGALKLLNVLQLKG--LSPDSV------TYNTLINGL---HRVGREEEAFKLFY 576

Query: 408 KKGVL--DPVAFNNLIRGHSKEGNPDSAFEI-VKIMGRRGVPRDADAYICLIESYLRKGE 464
            K      P  + +L+    +      AF + +K + +     D  A    IE   ++GE
Sbjct: 577 AKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETAN--EIEQCFKEGE 634

Query: 465 PADAKTALDSMIE-DGHSPASSL--FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
               + AL  +IE D      +L  +   +  L + GR   A  V   + EK +      
Sbjct: 635 ---TERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPS 691

Query: 522 VAKILEALLMRGHVEEAL 539
             K++  L  R  ++ A+
Sbjct: 692 CVKLIHGLCKREQLDAAI 709


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 239/535 (44%), Gaps = 46/535 (8%)

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG---IEPTRHTYNVMLWGFFLSL 175
           +LG    V SY  L K +  +G+   A     +M++EG     P    Y+ ++ GFF   
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVCSPDVVAYSTVIDGFFKEG 233

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
            +  A   F++M  RGI  D VTY+++++   + + MD+AE    +M  K + P   +Y 
Sbjct: 234 DVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYN 293

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I GY +  +  +A+R+F EM+   + P+ VT + L+  LC  GK+ E + V   M  +
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 353

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
              P   S  + L G   K G L    D+   M+   I  +   + +LI+ +    M D+
Sbjct: 354 GQNPNVFSYTIMLNGYATK-GCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDK 412

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DP 414
           A+ + +++ +  +  +P      +  +Y  +I  LC  G+   A   F Q++ +GV  D 
Sbjct: 413 AMIIFNEMRDHGV--KP------DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
            A++ LI+G    G+   A E++  +   G+  D   +  +I +  + G   DA+   D 
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 524

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
            +  G  P + ++  +M+     G+++ A RV  +MV  G++ N  +   ++      G 
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584

Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           ++E L     M+Q G  P+     ++L                           Y  ++D
Sbjct: 585 IDEGLSLFREMLQKGIKPS-----TIL---------------------------YNIIID 612

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
            L  AG+T+ A     ++ E G   +  + + ++ GL +     +A  L + +R 
Sbjct: 613 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRA 667



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/474 (22%), Positives = 214/474 (45%), Gaps = 14/474 (2%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           GK   A  +L  M + G     D+  +  +I+ + K+G V ++  +F  M Q G+     
Sbjct: 196 GKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFV 255

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y ++   + +      A+ +  +M+++G+ P   TYN +++G+  + + + A+R F++M
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           +   I  DVVT + ++    ++ K+ EA  +F  M  K   P V SYT M+ GY      
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCL 375

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
            D   +FD M    + P+  T+  L+    + G + +   +  EM +  + P D   +  
Sbjct: 376 VDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP-DVVTYRT 434

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++   C+ G ++ A +    MI   +  +   Y  LI+ FC      +A +L+ +++   
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM--- 491

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA--FNNLIRGHS 425
                 + + ++   ++ +I +LC  G+   A+  F   +  G L P A  ++ L+ G+ 
Sbjct: 492 -----NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG-LHPTAVVYSMLMDGYC 545

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
             G  + A  +   M   G+  +   Y  L+  Y + G   +  +    M++ G  P++ 
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 605

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           L+  +++ LFE GR   A      M E G+  N      +L  L      +EA+
Sbjct: 606 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAI 659



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 120/527 (22%), Positives = 228/527 (43%), Gaps = 46/527 (8%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  ++  L +   ++ A   L  M  KGV  +   +  LI  Y   G  +E+V++F
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M++  +   V +   L   + + G+   A+  F+ M  +G  P   +Y +ML G+   
Sbjct: 313 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATK 372

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L      F+ M   GI+ D+ T+N +I  Y     +D+A  +F EM++  ++P V++Y
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I     + + DDA+  F++M    V P+   Y  L+ G C  G +++ ++++ E++ 
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492

Query: 295 ---------------------RYIPPKD-------------NSVFMKLLGVQCKSGHLNA 320
                                R +  ++               V+  L+   C  G +  
Sbjct: 493 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEK 552

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  V  AM+   I      YG L+  +CK    D  + L  ++++K I  +P + L    
Sbjct: 553 ALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI--KPSTIL---- 606

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
             YN +I  L   G+T  A++ F ++ + G+ ++   +N ++RG  K    D A  + K 
Sbjct: 607 --YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKE 664

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +    V  +      +I    +     +AK    S+   G  P    +  ++ +L ++G 
Sbjct: 665 LRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGL 724

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRID 543
           V+ A  +  SM   G + +  L+  ++  LL +  +  A   L +ID
Sbjct: 725 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKID 771



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 185/397 (46%), Gaps = 10/397 (2%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G+  D   F VLI++Y   G++ +++ IF+ M+  GV+  V +Y  +   + R G+   A
Sbjct: 389 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
              FN+M+ +G+ P ++ Y+ ++ GF     L  A     ++ + G+ LD+V ++++IN 
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +  ++ +A+ +F       + PT + Y+ ++ GY  V + + ALR+FD M S  ++PN
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            V Y  L+ G C  G++ E   + REM+++ I P    ++  ++    ++G    A    
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS-TILYNIIIDGLFEAGRTVPAKVKF 627

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             M    I      Y I++    K   +D AI L  +L    +         +   + N 
Sbjct: 628 HEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNV--------KINIITLNT 679

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           MI  +    +  +A+  F  + + G++   V ++ +I    KEG  + A ++   M   G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
              D+     ++   L+K E   A   L  + E   S
Sbjct: 740 CEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/418 (22%), Positives = 185/418 (44%), Gaps = 14/418 (3%)

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF-DE 256
           TY  +++   R  + + A   F ++    +   +I    ++KG+   +R D+AL I    
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHR 172

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKS 315
                  P+  +Y+ LL  LCD GK  +   +LR M E   +   D   +  ++    K 
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKE 232

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G +N A D+ K M++  IP +   Y  ++   CKA   D+A   L ++V K ++  P + 
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL--PNNW 290

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
                 +YN +I      GQ  +A   F+++ +  +L D V  + L+    K G    A 
Sbjct: 291 ------TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           ++   M  +G   +  +Y  ++  Y  KG   D     D M+ DG +P    F  ++++ 
Sbjct: 345 DVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 404

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
              G +  A  +   M + GVK ++     ++ AL   G +++A+ + + M+  G  P+ 
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
             +  L+      G  + A +L+   +     +D+  +  +++ L   G+ ++A +I 
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 120/227 (52%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VGK+  A  +   M   G++ ++ ++  L+  Y K G + E + +F  M Q G++ S   
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y+ +   +   GR + AK  F++M   GI   + TYN++L G F +   + AI  F++++
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELR 666

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  + ++++T NTMI G  + ++++EA+ LFA +    + P V++Y+ MI   +     +
Sbjct: 667 AMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           +A  +F  M++   +P++     ++  L    ++V     L ++ ER
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 773


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 234/518 (45%), Gaps = 17/518 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI-FDI 116
           T+  +I     VG LN A   L  + K G++ +   F  ++ +   +    +++ I    
Sbjct: 15  TYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRW 74

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG--IEPTRHTYNVMLWGFFLS 174
             +LG    V SY  L K +    +   A    + M  +G    P   +Y  ++ GFF  
Sbjct: 75  TPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKE 134

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            ++  A   F +M  RGI  DVVT N++I+G  + + MD+AE++  +M +K+I P   +Y
Sbjct: 135 DEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTY 194

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            +++ GY++  +  +A+RI  +M      PN VTY+ L+  LC  G   E +++L  M++
Sbjct: 195 NSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQ 254

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P + + +  LL      G L    +++  M++  +  +   + I I  + K    D
Sbjct: 255 SRGNP-NVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLD 313

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
            A+   +K+         Q  L  +  SY  MI  LC  G+   A   F Q++  G+  D
Sbjct: 314 EAMLTFNKM--------RQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPD 365

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V F NLI G S  G  + A E+   M  RG+      +  +I+   ++G+  +AKT  D
Sbjct: 366 IVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFD 425

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M      P    + +++   F  G++    +++  M+  G+K N      +L+ +L  G
Sbjct: 426 LMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMG 485

Query: 534 ---HVEEALGRIDLMMQSGSVPNFDSLL-SVLSEKGKT 567
               V      ID   + G + +  +L   +LS+  KT
Sbjct: 486 LKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKT 523



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 192/416 (46%), Gaps = 15/416 (3%)

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK--NIEPTVISYTTMIKGYVAVERAD 248
           G + DV +Y  ++ G    KK +EA  L   M E   +  P V+SYTT+I G+   +   
Sbjct: 79  GCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVG 138

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A  +F EM    + P+ VT  +++ GLC    M + ++VLR+M +++I P D + +  L
Sbjct: 139 KAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMP-DCTTYNSL 197

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +     SG L  A  +LK M R   P     Y +LI+  CK   +  A ++L+ ++    
Sbjct: 198 VHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMI---- 253

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
               QS  +   ++Y  ++      G   +       +++ GV  D   FN  I  + K 
Sbjct: 254 ----QSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKC 309

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G  D A      M ++G+  D  +Y  +I+   + G    A +    MI+DG SP   +F
Sbjct: 310 GRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVF 369

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            +++      G+ + A  +   M+++G++  + +   +++ L   G V EA    DLM  
Sbjct: 370 TNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPI 429

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
           +   PN   +++++      GK    +KLLD  L      +  ++  +LD +L+ G
Sbjct: 430 ASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMG 485



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 164/380 (43%), Gaps = 16/380 (4%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I+ L +V  ++ A  +L  M  K +  D   +  L+  Y   G ++E+V+I 
Sbjct: 155 DVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRIL 214

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M + G   +  +Y  L   + + G +  A+   N M+     P   TY  +L G+   
Sbjct: 215 KQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATK 274

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             L       + M   G+  D   +N  I  Y +  ++DEA   F +M+++ + P +ISY
Sbjct: 275 GDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISY 334

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            TMI G   + R D A+  F +M    + P+ V +T L+ G    GK  + +++  EM++
Sbjct: 335 GTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMD 394

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R I P    VF  ++    K G +  A  +   M   S+      Y  +I  +  A   D
Sbjct: 395 RGIRPT-VVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLD 453

Query: 355 RAIKLLDKLVEKEIILRPQST-------------LDMEASSYNPMIQHLCHNGQTGKAEI 401
             +KLLD ++   + L+P +              L  + ++ N +I   C +G+      
Sbjct: 454 EVLKLLDDML--SVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLT 511

Query: 402 FFRQLMKKGVLDPVAFNNLI 421
            FR+++ K         N+I
Sbjct: 512 LFREMLSKAAKTDTVTENII 531



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 184/432 (42%), Gaps = 18/432 (4%)

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
           A    K + PT ++YT +I     V   + A     ++    ++ NA+++T +L  LC  
Sbjct: 2   ARAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAE 61

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS--IPTEA 337
            +  +   ++     +     D   +  LL   C       A D++  M       P   
Sbjct: 62  KRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNV 121

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y  +I  F K +   +A  L  +++++ I   P   +     + N +I  LC      
Sbjct: 122 VSYTTVIHGFFKEDEVGKAYTLFCEMLDRGI---PPDVV-----TCNSIIDGLCKVQAMD 173

Query: 398 KAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           KAE   RQ+  K ++ D   +N+L+ G+   G    A  I+K M R G P +   Y  LI
Sbjct: 174 KAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLI 233

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           +   + G   +A+  L+SMI+   +P  + +  ++      G +   + ++  MV+ GV+
Sbjct: 234 DCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVR 293

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            +  +    + A +  G ++EA+   + M Q G +P+   + +++  L + G+  AA+  
Sbjct: 294 PDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMS- 352

Query: 574 LDFCLGRDCII--DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
             FC   D  +  D+  +  ++      GK   A  + +++M++G          +I  L
Sbjct: 353 -QFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKL 411

Query: 632 NQEGNTKQADIL 643
            +EG   +A  L
Sbjct: 412 FKEGKVTEAKTL 423


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 123/547 (22%), Positives = 241/547 (44%), Gaps = 69/547 (12%)

Query: 40  LQFFRWVERAGLFNHDRETHLKMIEIL-----------------GRVGKLNHARCILLDM 82
           L FF ++     F+H  +++  M+  L                  R GK + +      +
Sbjct: 94  LSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASIL 153

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KG      +F+ L+  Y + G V ++++ F + K+  ++        L + +++    
Sbjct: 154 ETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSP 213

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
           M+A  ++ ++L  G  P  +T+NV++       K++ A   F++++  G+    V++NT+
Sbjct: 214 MVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTL 273

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           INGY +   ++E  +L   M+E  + P V +Y+ +I G     + +DA  +F EM    +
Sbjct: 274 INGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGL 333

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN VT+T L+ G                                    QCK+G ++ A 
Sbjct: 334 VPNDVTFTTLING------------------------------------QCKNGRVDLAL 357

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           ++ + M    +  +   Y  LI+  CK   +  A K + ++ ++ +I         +  +
Sbjct: 358 EIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLI--------PDKFT 409

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  ++   C  G    A    ++++K+G+ LD VAF  +I G  ++G    A   ++ M 
Sbjct: 410 YTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREML 469

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           R G+  D   Y  +++ + +KG+       L  M  DGH P    +  +M  L + G+V+
Sbjct: 470 RAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVK 529

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA-LGRI-DLMMQSGSVPNFDSLLS 559
            A  ++ +M+  GV  +      I   +L++GH +   LG   ++  + G V ++ S  S
Sbjct: 530 NADMLLNAMLNLGVVPD-----DITYNILLQGHCKHGKLGDFQNVKTEMGLVSDYASYRS 584

Query: 560 VLSEKGK 566
           +L E  K
Sbjct: 585 LLHELSK 591



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 176/365 (48%), Gaps = 22/365 (6%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+F+  +  +G +  +  T   ++  L + GK+  A+ I  ++ K G+Q     F  LI
Sbjct: 216 ALEFYLEILDSG-YPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLI 274

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             Y K G ++E  ++  +M++  V   V +Y AL   + +  +   A   F +M   G+ 
Sbjct: 275 NGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLV 334

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   T+  ++ G   + +++ A+  ++ M ++G+  D+V YNT+I+G  +     EA K 
Sbjct: 335 PNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKF 394

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM ++ + P   +YTT++ G       + AL +  EM    ++ + V +TA++ GLC 
Sbjct: 395 VGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCR 454

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            GK+V+ ++ LREM+   + P D +  M + G  CK G +     +LK M         G
Sbjct: 455 DGKIVDAERTLREMLRAGLKPDDGTYTMVMDGF-CKKGDVKMGFKLLKEM------QSDG 507

Query: 339 H------YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           H      Y +L+   CK      A  LL+ ++   ++  P         +YN ++Q  C 
Sbjct: 508 HIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVV--PDDI------TYNILLQGHCK 559

Query: 393 NGQTG 397
           +G+ G
Sbjct: 560 HGKLG 564



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 185/449 (41%), Gaps = 64/449 (14%)

Query: 251 LRIFDEMKSFDVKPNAV-TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           L  FD + S+    + V +Y +++  L       + + +L  +V R      +SVF  +L
Sbjct: 94  LSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASIL 153

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF--------------CKAEMYDR 355
             +   G L+++  V  A+  +S+ TE G+    I+ F              CK  + +R
Sbjct: 154 ETK---GTLSSSF-VFDAL--MSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKC-LLER 206

Query: 356 AIKLLDKLVEKEIILRP-QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            IK+   +V  E  L    S       ++N ++  LC  G+   A++ F ++ K G L P
Sbjct: 207 MIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG-LQP 265

Query: 415 --VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
             V+FN LI G+ K GN +  F +  +M    V  D   Y  LI+   ++ +  DA    
Sbjct: 266 TAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLF 325

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
             M + G  P    F +++    ++GRV  A  + + M  KG+K +L L   +++ L   
Sbjct: 326 KEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKG 385

Query: 533 GHVEEALGRIDLMMQSGSVPN--------------------------------------F 554
           G+  EA   +  M + G +P+                                      F
Sbjct: 386 GYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAF 445

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            +++S L   GK + A + L   L      D  +Y  V+D     G     + +L ++  
Sbjct: 446 TAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQS 505

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            G +    + + L+ GL ++G  K AD+L
Sbjct: 506 DGHIPGVITYNVLMNGLCKQGQVKNADML 534



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/426 (21%), Positives = 184/426 (43%), Gaps = 14/426 (3%)

Query: 215 AEKLFAEMKE-KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           A  +FA + E K    +   +  ++  Y       DA++ F   K  ++K        LL
Sbjct: 145 ASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLL 204

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             +      +   +   E+++   PP +   F  L+   CK G +  A  +   + +  +
Sbjct: 205 ERMIKMSSPMVALEFYLEILDSGYPP-NVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGL 263

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
              A  +  LI  +CK+   +   +L  K+V +E  + P      +  +Y+ +I  LC  
Sbjct: 264 QPTAVSFNTLINGYCKSGNLEEGFRL--KMVMEEFRVFP------DVFTYSALIDGLCKE 315

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            Q   A   F+++  +G++ + V F  LI G  K G  D A EI + M  +G+  D   Y
Sbjct: 316 CQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLY 375

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI+   + G   +A+  +  M + G  P    + ++++   ++G ++ A  + K MV+
Sbjct: 376 NTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVK 435

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           +G++ +      I+  L   G + +A   +  M+++G  P+   +  ++    +KG    
Sbjct: 436 EGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKM 495

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
             KLL        I  + +Y  +++ L   G+  NA  +L  ++  G V D  + + L+ 
Sbjct: 496 GFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQ 555

Query: 630 GLNQEG 635
           G  + G
Sbjct: 556 GHCKHG 561


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/499 (23%), Positives = 234/499 (46%), Gaps = 13/499 (2%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+L  A  +L  M   G+Q D   + +LI+ Y K G   E+  IFD M + G      +Y
Sbjct: 204 GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTY 263

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
             L      +G  +        M+ +GI    H +N+++  +  +  L+ A+  F +M+ 
Sbjct: 264 RTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQ 323

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           +G S +VVTY T+I+   +  ++++A   F++M  + + P +I++T++I G   +     
Sbjct: 324 KGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKK 383

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
             ++  EM +  + PNA+    ++  LC  G+++E      +++   + P D   +  L+
Sbjct: 384 VEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKP-DVVSYTILI 442

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G ++ +  +L  M+ + +  +   Y  L+  +CK    D A+ L  ++  K++ 
Sbjct: 443 DGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDV- 501

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
            +P       A +YN ++  L H G+   A  F+ +++  G+ L    +N ++ G  +  
Sbjct: 502 -KPN------AITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENS 554

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             D A  + + +  +    +   +  +I   L+ G   DAK+   +++  G  P + ++ 
Sbjct: 555 FVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYG 614

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA---LGRIDLM 545
            +++S  E+G ++ +  +  SM + G   N   +  I+  LL +G V  A   L +ID  
Sbjct: 615 LMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEK 674

Query: 546 MQSGSVPNFDSLLSVLSEK 564
             S        L+S++SE+
Sbjct: 675 EYSVEASTAVLLISIVSER 693



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 139/602 (23%), Positives = 261/602 (43%), Gaps = 74/602 (12%)

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILR----------------RGR----YMMAKRYF 149
           +V +F+ M Q+GV + + +    F +++R                RG     +MMA   +
Sbjct: 75  AVSLFNTMAQVGVNK-LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGY 133

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
           N        P   +YN+++ G F   +++ A   F +M  +G   ++VTYN++I+G  + 
Sbjct: 134 N------CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKA 187

Query: 210 KKMDEAEKLFAEMKEK----------------NIEPTVISYTTMIKGYVAVERADDALRI 253
           + MD+AE +  +M +K                 ++P V++Y+ +I  Y  + R  +A  I
Sbjct: 188 QAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNI 247

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           FD M      P+A TY  LL G    G +V++  +L  M++  IP +D+ VF  L+    
Sbjct: 248 FDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDH-VFNILIRAYA 306

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K+  L+ A      M +         Y  +I+  CKA   + A+    ++V +       
Sbjct: 307 KNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSE------- 359

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-NNLIRGHSKEGNPDS 432
             L  +  ++  +I  LC  G+  K E    +++ +G+     F N ++    KEG    
Sbjct: 360 -GLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE 418

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A +    +   GV  D  +Y  LI+ Y   G+  ++   L  M+  G  P +  + +++ 
Sbjct: 419 AHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLN 478

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA----LGRIDLMMQS 548
              ++GRV  A  + + M  K VK N      IL  L   G V  A    +  +D  +Q 
Sbjct: 479 GYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQL 538

Query: 549 GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           G +  ++ +L  L E      A+++      ++  +++ ++  ++  LL  G+  +A S+
Sbjct: 539 G-INTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSL 597

Query: 609 LFKIMEKGGVTD----------------WKSSDKLIAGLNQEGNTKQADILSRMIRGEMS 652
              I+  G V D                 + SD+L   + + G T  +  L+ ++R  + 
Sbjct: 598 FSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLE 657

Query: 653 RG 654
           +G
Sbjct: 658 KG 659



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 215/478 (44%), Gaps = 11/478 (2%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A++  + +   GL   D  T+  +I+   ++G+   AR I   M ++G   D   +  
Sbjct: 207 EEAVRLLKKMSGGGL-QPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRT 265

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+  Y  KG + +   +  +M Q G+      ++ L +   +      A   F +M  +G
Sbjct: 266 LLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKG 325

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
             P   TY  ++     + ++E A+  F  M S G+S D++T+ ++I+G     +  + E
Sbjct: 326 FSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVE 385

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           KL  EM  + I P  I   T++       R  +A   FD++    VKP+ V+YT L+ G 
Sbjct: 386 KLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGY 445

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  GKM E  K+L  MV   + P DN  +  LL   CK+G ++ A  + + M    +   
Sbjct: 446 CLDGKMDESIKLLGRMVSIGLRP-DNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPN 504

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
           A  Y I++     A     A +   K+V+        S + +  ++YN ++  LC N   
Sbjct: 505 AITYNIILHGLFHAGRVVAAREFYMKIVD--------SGIQLGINTYNIVLGGLCENSFV 556

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A   F+ L  K   L+   FN +I G  K G    A  +   +   G+  DA  Y  +
Sbjct: 557 DEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLM 616

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           I+S++ +G   ++     SM ++G +  S    +++  L E G V+ A   +  + EK
Sbjct: 617 IQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEK 674


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 156/691 (22%), Positives = 275/691 (39%), Gaps = 103/691 (14%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I  L  VG+ +    +   M + G + +  +   LI  + ++G V  ++ + D MK
Sbjct: 64  YTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMK 123

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
               +  +  Y+       + G+  MA ++F++M + G+ P   TY  M+     + +L+
Sbjct: 124 SNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLD 183

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+  FE M+          YNTMI GY    K DEA  L    + K   P+V++Y  ++
Sbjct: 184 EAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCIL 243

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
                  + D ALRIF+EMK  D  PN  TY  ++  LC AG +    KV   M E  + 
Sbjct: 244 TCLGKKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLF 302

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P   ++ + ++   CK+  L+ A  + + M       +   +  LI+   K    D A +
Sbjct: 303 PNVRTINI-MIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYR 361

Query: 359 LLDKLVEKEII---------LRPQSTLDMEASS---YNPMIQHLCH-------------- 392
           + +++++ + I         +R     D +      Y  M++  C               
Sbjct: 362 IYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVF 421

Query: 393 -NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G+T K    F ++  +G L D  +++ LI    K G     +E+   M  +G   D  
Sbjct: 422 KAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTR 481

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL------------FED- 497
           AY  +I+ + + G+   A   L+ M   GH P    + SV++ L            FE+ 
Sbjct: 482 AYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 541

Query: 498 ----------------------GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                                 GRV  A  VM+ M++KG+  N+     +L+ L+    +
Sbjct: 542 KSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEI 601

Query: 536 EEALGRIDLMMQSGSVPN--------------------------------------FDSL 557
            EAL     M      PN                                      + ++
Sbjct: 602 NEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAM 661

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +S L++ G    A  L +       I D ASY  +++ L  A + L+AY +  +   KG 
Sbjct: 662 ISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGC 721

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
               K+   L+  L++    +QA I+  ++R
Sbjct: 722 SIHTKTCVALLDALHKAECLEQAAIVGAVLR 752



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 212/478 (44%), Gaps = 47/478 (9%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++  +L  A N E A +    ++ AGLF + R  ++ MI+ L +  KL+ A  I   M
Sbjct: 273 YNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINI-MIDRLCKAQKLDEACSIFEGM 331

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K    D   F  LI+  GK+G V ++ +I++ M       +V  Y +L +   +  R 
Sbjct: 332 DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRK 391

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI---------- 192
               + + +M+  G  P     N  +   F + + E     FE++K+RG           
Sbjct: 392 EDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSIL 451

Query: 193 -------------------------SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
                                     LD   YNT+I+G+ +  K+++A +L  EMK    
Sbjct: 452 IHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGH 511

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
            PTV++Y +++ G   ++R D+A  +F+E KS  ++ N V Y++L+ G    G++ E   
Sbjct: 512 HPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYL 571

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           V+ EM+++ + P +   +  LL    K+  +N A    ++M  L        Y ILI   
Sbjct: 572 VMEEMMQKGLTP-NVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGL 630

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL- 406
           CK   +++A     ++ ++   L+P +       +Y  MI  L  +G   +A   F +  
Sbjct: 631 CKVRKFNKAFVFWQEMQKQG--LKPNTI------TYTAMISGLAKSGNVAQASSLFERFR 682

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
              G+ D  ++N +I G S       A+++ +    +G        + L+++ L K E
Sbjct: 683 ASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDA-LHKAE 739



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 208/516 (40%), Gaps = 47/516 (9%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+ S  K   + E+  +  +M+      +  +Y  L   +   G        FN+M   G
Sbjct: 32  LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
            E   H    ++  F    +++ A+   ++MKS     D+V YN  I+ + +  K+D A 
Sbjct: 92  YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 151

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           K F EMK   + P  ++YT+M+       R D+A+ IF++M+     P A  Y  ++ G 
Sbjct: 152 KFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGY 211

Query: 277 CDAGKMVEVQKVL-REMVERYIPP-KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
             AGK  E   +L R+  +  IP     +  +  LG   K G  + A  + + M R ++P
Sbjct: 212 GSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLG---KKGKTDKALRIFEEMKRDAMP 268

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                Y I+I   CKA   + A K+ D +  KE  L P         + N MI  LC   
Sbjct: 269 N-LPTYNIIIGMLCKAGNVEAAFKVRDAM--KEAGLFPN------VRTINIMIDRLCKAQ 319

Query: 395 QTGKAEIFFRQL-MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +  +A   F  +  K    D   F +LI G  K+G  D A+ I + M       +   Y 
Sbjct: 320 KLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYT 379

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI ++ +     D       M+  G SP   L  + M+ +F+ G  +    + + +  +
Sbjct: 380 SLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKAR 439

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKL 573
           G   +    + ++ +L+  G   E                   L   + ++G        
Sbjct: 440 GFLPDTRSYSILIHSLVKAGFARETY----------------ELYYAMKDQG-------- 475

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
                   C++D  +Y  V+D    +GK   AY +L
Sbjct: 476 --------CVLDTRAYNTVIDGFCKSGKVNKAYQLL 503



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 215/500 (43%), Gaps = 16/500 (3%)

Query: 148 YFNKMLSE----GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           Y  ++L E    G  PT +T   ++     S KL  A    + M+          Y T+I
Sbjct: 9   YLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLI 68

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
              +   + D    LF +M+E   E  V   TT+I+ +    R D AL + DEMKS    
Sbjct: 69  GALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFD 128

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            + V Y   +      GK+    K   EM    + P D+  +  ++GV CK+  L+ A +
Sbjct: 129 ADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVP-DDVTYTSMMGVLCKANRLDEAVE 187

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + + M +      A  Y  +I  +  A  +D A  LL++   K  I  P         +Y
Sbjct: 188 IFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCI--PSVV------AY 239

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
           N ++  L   G+T KA   F ++ +  + +   +N +I    K GN ++AF++   M   
Sbjct: 240 NCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEA 299

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G+  +      +I+   +  +  +A +  + M     SP  + F S+++ L + GRV  A
Sbjct: 300 GLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDA 359

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
            R+ + M++     N+ +   ++         E+       MM+SG  P+    ++ +  
Sbjct: 360 YRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDC 419

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
           + + G+T     L +    R  + D  SY  ++ +L+ AG     Y + + + ++G V D
Sbjct: 420 VFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLD 479

Query: 621 WKSSDKLIAGLNQEGNTKQA 640
            ++ + +I G  + G   +A
Sbjct: 480 TRAYNTVIDGFCKSGKVNKA 499


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 192/385 (49%), Gaps = 35/385 (9%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F+ D+ ++  +I  L +VG+   A  +L  +  K VQ +  M+  +I    K   V ++ 
Sbjct: 156 FHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAF 215

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            ++  M   G+  +V +Y AL       G+   A   FNK++ E I+P  +T+N+++ GF
Sbjct: 216 DLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGF 275

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               K++     F  M  +GI  DVVTYN++++GY   K+++ A+ +F  M +  + P +
Sbjct: 276 CKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDI 335

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            SY  +I G+  +++ D A+ +F+EM   ++ PN VTY +L+ GL  +G++    +++ +
Sbjct: 336 RSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQ 395

Query: 292 MVERYIPPK---DNSVFMKLLGVQCKSGHLNAAADVLKAM----IRLSIPT--------- 335
           M +R +PP     NS+   L     K+  ++ A  ++       I+ S+ T         
Sbjct: 396 MHDRGVPPNILTYNSIIDALF----KTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC 451

Query: 336 -------EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
                      Y ++I  FCK  ++D A+ LL K+ +   I          A +Y   I+
Sbjct: 452 KVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCI--------PNAVTYEITIR 503

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLD 413
            L  N +  KAE  FR+++ +G+L+
Sbjct: 504 SLLDNNENDKAEKLFREMITRGLLN 528



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 177/389 (45%), Gaps = 30/389 (7%)

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
           + +K+++ G    + +Y  ++ G     +   A+   + +  + + L+ V YNT+I G  
Sbjct: 147 FHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMC 206

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
           + K +++A  L++EM  K I P V++Y+ +I G+  V +  DA+ +F+++   ++KP+  
Sbjct: 207 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGY 266

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           T+  L+ G C   KM E + V   M+++ I P D   +  L+   C    +N A  +   
Sbjct: 267 TFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP-DVVTYNSLMDGYCLVKEVNTAKSIFNT 325

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M +  +  +   Y ILI  FCK +  D+A+ L +++  K II            +YN +I
Sbjct: 326 MAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII--------PNVVTYNSLI 377

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
             L  +G+   A     Q+  +GV   +  +N++I    K    D A  ++     +G+ 
Sbjct: 378 DGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQ 437

Query: 447 RDADAY------ICLIESY--------------LRKGEPADAKTALDSMIEDGHSPASSL 486
                Y      +C +E Y               +KG   +A + L  M +    P +  
Sbjct: 438 PSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVT 497

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           +   + SL ++     A ++ + M+ +G+
Sbjct: 498 YEITIRSLLDNNENDKAEKLFREMITRGL 526



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/500 (20%), Positives = 194/500 (38%), Gaps = 72/500 (14%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   FN++L +   P    +N +L     S    T +   + M+ RGI  ++   N +I 
Sbjct: 70  AVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIY 129

Query: 205 GYNRFK----KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            + +      ++ +A     ++         +SY T+I G   V     AL +   +   
Sbjct: 130 CFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGK 189

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            V+ NAV Y  ++ G+C                                    K  H+N 
Sbjct: 190 LVQLNAVMYNTVIYGMC------------------------------------KDKHVND 213

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A D+   M+   I      Y  LI  F        AI L +K++ + I  +P      + 
Sbjct: 214 AFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENI--KP------DG 265

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            ++N ++   C + +  + +  F  +MK+G++ D V +N+L+ G+      ++A  I   
Sbjct: 266 YTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNT 325

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M + GV  D  +Y  LI  + +  +   A    + M      P    + S+++ L + GR
Sbjct: 326 MAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGR 385

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN------ 553
           +  A +++  M ++GV  N+     I++AL     V++A+  I      G  P+      
Sbjct: 386 ISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTI 445

Query: 554 -----------------FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
                            ++ ++    +KG    A+ LL       CI +  +YE  + +L
Sbjct: 446 LIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSL 505

Query: 597 LAAGKTLNAYSILFKIMEKG 616
           L   +   A  +  +++ +G
Sbjct: 506 LDNNENDKAEKLFREMITRG 525



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/466 (19%), Positives = 185/466 (39%), Gaps = 45/466 (9%)

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           ++ ++Y++    ++    +D+A  LF  +  +N  P    +  ++   V  +     L +
Sbjct: 49  INFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSL 108

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
             +M+   +KPN      L+   C  G                IP + +  F+       
Sbjct: 109 SQKMEFRGIKPNLFNCNILIYCFCQLG---------------LIPCQIHQAFL------- 146

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
                         ++ L    +   YG LI   CK      A+ LL ++  K +     
Sbjct: 147 ----------FHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLV----- 191

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDS 432
               + A  YN +I  +C +     A   + +++ KG+  + V ++ LI G    G    
Sbjct: 192 ---QLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKD 248

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A ++   +    +  D   +  L++ + +  +  + KT    M++ G  P    + S+M+
Sbjct: 249 AIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMD 308

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
                  V TA  +  +M + GV  ++     ++        V++A+   + M     +P
Sbjct: 309 GYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIP 368

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           N   ++SL+  LS+ G+   A++L+D    R    ++ +Y  ++DAL    +   A +++
Sbjct: 369 NVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALI 428

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQ-EGNTKQADILSRMIRGEMSRG 654
            K  ++G      +   LI GL + EG     +  + MI G   +G
Sbjct: 429 TKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKG 474



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 16/225 (7%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
            K    A   F  + + G+ N D  ++  +I    ++ K++ A  +  +M  K +  +  
Sbjct: 313 VKEVNTAKSIFNTMAQGGV-NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 371

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            +  LI+   K G +  ++++ D M   GV  ++ +Y+++   + +  +   A     K 
Sbjct: 372 TYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKF 431

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
             +GI+P+ +TY +++ G                 K  G  + V TYN MI+G+ +    
Sbjct: 432 KDQGIQPSMYTYTILIDGL---------------CKVEGYDITVNTYNVMIHGFCKKGLF 476

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           DEA  L ++MK+ +  P  ++Y   I+  +     D A ++F EM
Sbjct: 477 DEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM 521


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 229/533 (42%), Gaps = 50/533 (9%)

Query: 56  RETHL-KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           RETHL K++    + GK N +   L  +  KG   D  +   LI+ +            F
Sbjct: 67  RETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGF------------F 114

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           +                 FK I +  R M       ++L    EP    YN ++ GF   
Sbjct: 115 N-----------------FKNIEKASRVM-------EILESHTEPDVFAYNAVISGFCKV 150

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            ++E A +    MK+RG   D+VTYN MI      +K+  A K+  ++   N  PTVI+Y
Sbjct: 151 NRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITY 210

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           T +I+  +     ++A+++ +EM +  + P+  TY A++ G+C  G +    +++  +  
Sbjct: 211 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS 270

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           +   P D   +  LL      G  +    ++  M           Y ILI + C+    D
Sbjct: 271 KGCKP-DVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRID 329

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            AI +L  ++EKE        L  +  SY+P+I  LC  G+   A      ++  G L D
Sbjct: 330 EAISVLKVMIEKE--------LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 381

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +N ++    K GN + A EI   +   G P +  +Y  +I +    G+ + A   + 
Sbjct: 382 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 441

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           +MI  G  P    + S++  L  DG V+ A  ++  M + G +  +     +L  L    
Sbjct: 442 AMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 501

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
            +++A+G    M++ G  PN   +  L+  +   G    A++L +    RD I
Sbjct: 502 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 183/424 (43%), Gaps = 18/424 (4%)

Query: 43  FRWVERAGLFNHDRETHLK--------MIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           F+ +E+A       E+H +        +I    +V ++  A  +L  M  +G   D   +
Sbjct: 116 FKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTY 175

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            ++I S   +  +  ++K+ D +       +V +Y  L +  +  G    A +   +ML+
Sbjct: 176 NIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLA 235

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G+ P  +TYN ++ G      +E A      + S+G   DV++YN ++  +    K DE
Sbjct: 236 RGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDE 295

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
            EKL AEM  +  EP  ++Y+ +I       R D+A+ +   M   ++ P+  +Y  L+ 
Sbjct: 296 GEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLIS 355

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
            LC  G++     ++  M+     P D   +  +L   CK+G+ N A ++   +  +  P
Sbjct: 356 ALCKEGRLDLAIGIMDYMISNGCLP-DIVNYNTILAALCKNGNANQALEIFNKLRGMGCP 414

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                Y  +I          RA+ ++  ++ K +        D +  +YN +I  LC +G
Sbjct: 415 PNVSSYNTMISALWSCGDRSRALGMVPAMISKGV--------DPDEITYNSLISCLCRDG 466

Query: 395 QTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
              +A      + + G    V ++N ++ G  K    D A  +   M  +G   +   YI
Sbjct: 467 LVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYI 526

Query: 454 CLIE 457
            LIE
Sbjct: 527 LLIE 530



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/443 (22%), Positives = 198/443 (44%), Gaps = 49/443 (11%)

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++N   +  K +E+      +  K   P VI  T +IKG+   +  + A R+ + ++S  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-H 132

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +P+   Y A++ G C   ++    +VL  M  R   P                      
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLP---------------------- 170

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
            D++              Y I+I + C       A+K+LD+L+    +            
Sbjct: 171 -DIVT-------------YNIMIGSLCNRRKLGLALKVLDQLLLDNCM--------PTVI 208

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y  +I+     G   +A     +++ +G+L D   +N +IRG  KEG  + A E++  +
Sbjct: 209 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL 268

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G   D  +Y  L+ ++L +G+  + +  +  M   G  P    +  ++ SL   GR+
Sbjct: 269 TSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRI 328

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSL 557
             A  V+K M+EK +  +      ++ AL   G ++ A+G +D M+ +G +P   N++++
Sbjct: 329 DEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI 388

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           L+ L + G    A+++ +   G  C  +++SY  ++ AL + G    A  ++  ++ KG 
Sbjct: 389 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGV 448

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA 640
             D  + + LI+ L ++G  ++A
Sbjct: 449 DPDEITYNSLISCLCRDGLVEEA 471



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 121/248 (48%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           ++ T+  +I  L R G+++ A  +L  M +K +  D   ++ LI +  K+G +  ++ I 
Sbjct: 311 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 370

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M   G    + +Y+ +   + + G    A   FNK+   G  P   +YN M+   +  
Sbjct: 371 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 430

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
                A+     M S+G+  D +TYN++I+   R   ++EA  L  +M++    PTVISY
Sbjct: 431 GDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISY 490

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G   V R DDA+ +F EM     +PN  TY  L+ G+  AG   E  ++   +  
Sbjct: 491 NIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 550

Query: 295 RYIPPKDN 302
           R +  +D+
Sbjct: 551 RDVISQDS 558



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/349 (22%), Positives = 153/349 (43%), Gaps = 13/349 (3%)

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
            MKLL   CK+G  N +   L+ ++      +      LI+ F   +  ++A ++++ L 
Sbjct: 71  LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL- 129

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
                   +S  + +  +YN +I   C   +   A     ++  +G L D V +N +I  
Sbjct: 130 --------ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGS 181

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
                    A +++  +           Y  LIE+ + +G   +A   L+ M+  G  P 
Sbjct: 182 LCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPD 241

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + +++  + ++G V+ A+ ++ S+  KG K ++     +L A L +G  +E    + 
Sbjct: 242 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVA 301

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M   G  PN   +  L+S L   G+   A+ +L   + ++   D  SY+ ++ AL   G
Sbjct: 302 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 361

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
           +   A  I+  ++  G + D  + + ++A L + GN  QA  +   +RG
Sbjct: 362 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRG 410


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 200/426 (46%), Gaps = 10/426 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ +  K       + +++ M+ LG+  ++ + + L     R  +  +A  +  KM+
Sbjct: 84  FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMM 143

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G EP   T+  +L GF    ++  A+  F+ M   G   +VV YNT+I+G  + K++D
Sbjct: 144 KLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVD 203

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A  L   M+   I P  ++Y ++I G     R DDA R+   M   ++ P+  T+ AL+
Sbjct: 204 NALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALI 263

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
                 G++ E +++  EM+ R + P   +  + + G+ C    L+ A  +   M+    
Sbjct: 264 DACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL-CMYSRLDEAEQMFGFMVSKGC 322

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y ILI  +CK++  +  +KL  ++ ++ ++   ++T+     +Y  +IQ  C  
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV---RNTV-----TYTVLIQGYCRA 374

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+   AE  F+ ++  GV  + + +N L+ G    G  + A  I+  M + G+  D   Y
Sbjct: 375 GKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTY 434

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +I    + GE ADA     S+   G +P    + ++M  L++ G    A  + + M E
Sbjct: 435 NIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKE 494

Query: 513 KGVKEN 518
            G+  N
Sbjct: 495 DGILPN 500



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 208/448 (46%), Gaps = 10/448 (2%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +S+ +F  M Q     S+  +  L   I +  +Y +    + +M   GI     T N+
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           +L  F    +L  A+ F   M   G   D+VT+ +++NG+ R  ++ +A  +F  M E  
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            EP V+ Y T+I G    ++ D+AL + + M+   ++P+AVTY +L+ GLC++G+  +  
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           +++  M +R I P D   F  L+    K G ++ A ++ + MIR S+  +   Y +LI  
Sbjct: 242 RMVSCMTKREIYP-DVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG 300

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C     D A ++   +V K     P      +  +Y+ +I   C + +       F ++
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCF--P------DVVTYSILINGYCKSKKVEHGMKLFCEM 352

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            ++GV+ + V +  LI+G+ + G  + A EI K M   GVP +   Y  L+      G+ 
Sbjct: 353 SQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKI 412

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A   L  M + G       +  ++  + + G V  A  +  S+  KG+  ++     +
Sbjct: 413 EKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAM 472

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN 553
           +  L  +G   EA      M + G +PN
Sbjct: 473 MLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 190/393 (48%), Gaps = 10/393 (2%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           H+  T   ++    R  +L+ A   L  M K G + D   F  L+  + +   + +++ +
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYM 173

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           FD M ++G E +V  Y+ +   + +  +   A    N+M  +GI P   TYN ++ G   
Sbjct: 174 FDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCN 233

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           S + + A R    M  R I  DV T+N +I+   +  ++ EAE+L+ EM  ++++P +++
Sbjct: 234 SGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVT 293

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y+ +I G     R D+A ++F  M S    P+ VTY+ L+ G C + K+    K+  EM 
Sbjct: 294 YSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +R +  ++   +  L+   C++G LN A ++ K M+   +P     Y +L+   C     
Sbjct: 354 QRGV-VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKI 412

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           ++A+ +L  +         +S +D +  +YN +I+ +C  G+   A   +  L  KG+  
Sbjct: 413 EKALVILADM--------QKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTP 464

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           D   +  ++ G  K+G    A  + + M   G+
Sbjct: 465 DIWTYTAMMLGLYKKGLRGEADALFRKMKEDGI 497



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 44/351 (12%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +  ++++A  +L  M   G++ D   +  LI      G   ++ ++   M +  
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKRE 251

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +   V +++AL    ++ GR   A+  + +M+   ++P   TY+++++G  +  +L+ A 
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F  M S+G   DVVTY+ +INGY + KK++   KLF EM ++ +    ++YT +I+GY
Sbjct: 312 QMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGY 371

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               + + A  IF  M    V PN +TY  LL GLCD GK+ +   +L +M         
Sbjct: 372 CRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ-------- 423

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
                       KSG     AD++              Y I+I   CKA     A  L  
Sbjct: 424 ------------KSG---MDADIVT-------------YNIIIRGMCKAGEVADAWDLYC 455

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            L  K   L P      +  +Y  M+  L   G  G+A+  FR++ + G+L
Sbjct: 456 SLNLKG--LTP------DIWTYTAMMLGLYKKGLRGEADALFRKMKEDGIL 498



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 153/303 (50%), Gaps = 3/303 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L  +K  ++AL     +E  G+   D  T+  +I  L   G+ + A  ++  M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEVDGI-RPDAVTYNSLISGLCNSGRWDDATRMVSCM 247

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K+ +  D   F  LI++  K+G + E+ ++++ M +  ++  + +Y  L   +    R 
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A++ F  M+S+G  P   TY++++ G+  S K+E  ++ F +M  RG+  + VTY  +
Sbjct: 308 DEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVL 367

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I GY R  K++ AE++F  M    + P +I+Y  ++ G     + + AL I  +M+   +
Sbjct: 368 IQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGM 427

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             + VTY  ++ G+C AG++ +   +   +  + + P   +    +LG+  K G L   A
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLY-KKG-LRGEA 485

Query: 323 DVL 325
           D L
Sbjct: 486 DAL 488



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/468 (20%), Positives = 196/468 (41%), Gaps = 45/468 (9%)

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
           FF  ++ R +   +  ++ +++  ++ KK D    L+ +M+   I   + +   ++  + 
Sbjct: 69  FFHMVQCRPLP-SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
              +   AL    +M     +P+ VT+ +LL G C   ++ +   +   MVE    P + 
Sbjct: 128 RCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEP-NV 186

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
            ++  ++   CKS  ++ A D+L  M    I  +A  Y  LI   C +  +D A +++  
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSC 246

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
           + ++EI   P      +  ++N +I      G+  +AE  + +++++  LDP  V ++ L
Sbjct: 247 MTKREIY--P------DVFTFNALIDACVKEGRISEAEELYEEMIRRS-LDPDIVTYSLL 297

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G       D A ++   M  +G   D   Y  LI  Y +  +          M + G 
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
              +  +  +++     G++  A  + K MV  GV  N+     +L  L   G +E+AL 
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALV 417

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            +  M +SG     D+                            D+ +Y  ++  +  AG
Sbjct: 418 ILADMQKSG----MDA----------------------------DIVTYNIIIRGMCKAG 445

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           +  +A+ +   +  KG   D  +   ++ GL ++G   +AD L R ++
Sbjct: 446 EVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMK 493



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 105/214 (49%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
            + D  T+  +I  L    +L+ A  +   M  KG   D   + +LI  Y K   V+  +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K+F  M Q GV R+  +Y  L +   R G+  +A+  F  M+  G+ P   TYNV+L G 
Sbjct: 347 KLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGL 406

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + K+E A+    DM+  G+  D+VTYN +I G  +  ++ +A  L+  +  K + P +
Sbjct: 407 CDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDI 466

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
            +YT M+ G        +A  +F +MK   + PN
Sbjct: 467 WTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 3/245 (1%)

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
           ++FF  +  + +     F+ L+   SK    D    + + M   G+P +      L+  +
Sbjct: 67  DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            R  + + A + L  M++ GH P    F S++       R+  A  +   MVE G + N+
Sbjct: 127 CRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNV 186

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
            +   I++ L     V+ AL  ++ M   G  P+   ++SL+S L   G+   A +++  
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSC 246

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
              R+   D+ ++  ++DA +  G+   A  +  +++ +    D  +   LI GL     
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306

Query: 637 TKQAD 641
             +A+
Sbjct: 307 LDEAE 311


>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
          Length = 689

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 186/394 (47%), Gaps = 24/394 (6%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D      L+ +  K  +   + K+FD M + GV  +   Y+A+  + L+ G   +A+   
Sbjct: 236 DAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLM 295

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
            +M + G+   R ++N ++  +        A+   E M+++G+  DVVT+N++I+G  + 
Sbjct: 296 TRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKE 355

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
           +++ EA +L  EM    + P  ++YTT++ GY      ++A+++  EM++  + P   TY
Sbjct: 356 RRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATY 415

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
            A+L  LC+ GKM EV  +L EM ER +   D+     L+   CK G + +A  V + M+
Sbjct: 416 NAILRKLCEDGKMKEVNVLLNEMDERKVQA-DHVTCNTLINAYCKRGDMTSALKVKRRMM 474

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP---- 385
              +  +   Y  L+  FCKA+  D A                ++  +M  + ++P    
Sbjct: 475 ESGLQLDQFTYKALVHGFCKAKELDEA---------------KEALFEMMGAGFSPNYSV 519

Query: 386 ---MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
              ++  LC+            +LMK+G   D   + +LIR   K+G  D A  +   M 
Sbjct: 520 LSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQ 579

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +G+  D   Y  L  +YL  G+P  A   L+ M
Sbjct: 580 GKGLEADCLVYATLACAYLTAGKPVAALDILNEM 613



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/399 (22%), Positives = 168/399 (42%), Gaps = 42/399 (10%)

Query: 13  KIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL--KMIEILGRV 69
           + R +VP     + +   L  ++ +  A + F  + RAG+      TH+   M+ +  + 
Sbjct: 229 RAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGV---AMNTHVYNAMLHVCLKA 285

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G    A  ++  M   GV  D   F  +I  Y +KG+  E++ + + M+  GV+  V ++
Sbjct: 286 GDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTW 345

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF------ 183
           ++L   + +  R   A +   +M   G+ P   TY  ++ G+  +  LE A++       
Sbjct: 346 NSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEA 405

Query: 184 -----------------------------FEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
                                          +M  R +  D VT NT+IN Y +   M  
Sbjct: 406 MGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTS 465

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A K+   M E  ++    +Y  ++ G+   +  D+A     EM      PN    + ++ 
Sbjct: 466 ALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVD 525

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GLC+    V V  +  E+++R  PP D +V+  L+   CK G ++ A +V   M    + 
Sbjct: 526 GLCNKNNAVAVLAIPDELMKRGFPP-DKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLE 584

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
            +   Y  L   +  A     A+ +L+++ +K++ + PQ
Sbjct: 585 ADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYITPQ 623



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 167/396 (42%), Gaps = 10/396 (2%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A R F+ M +  + P  H  + +L     S    TA + F+ M   G++++   YN M++
Sbjct: 221 ALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLH 280

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              +      AE L   M    +     S+ T+I  Y       +A+ + + M++  VK 
Sbjct: 281 VCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKA 340

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + VT+ +L+ GLC   ++ E  ++LREM    + P D+  +  L+   C++G L  A  +
Sbjct: 341 DVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAP-DHVTYTTLVDGYCRAGDLEEAVKL 399

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              M  + +      Y  ++   C+         LL+++ E+++          +  + N
Sbjct: 400 RGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKV--------QADHVTCN 451

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I   C  G    A    R++M+ G+ LD   +  L+ G  K    D A E +  M   
Sbjct: 452 TLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGA 511

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   +      +++    K          D +++ G  P  +++RS++  L + G +  A
Sbjct: 512 GFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLA 571

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             V   M  KG++ +  + A +  A L  G    AL
Sbjct: 572 GNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAAL 607



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 45/305 (14%)

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           R  DALR+FD M++ +V P+A   +ALL  L  +      +KV  +M    +   +  V+
Sbjct: 217 RPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVA-MNTHVY 275

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             +L V  K+G    A  ++  M    +P                         LD+   
Sbjct: 276 NAMLHVCLKAGDAALAESLMTRMDAAGVP-------------------------LDRF-- 308

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
                           S+N +I   C  G   +A     ++  +GV  D V +N+LI G 
Sbjct: 309 ----------------SFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGL 352

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            KE     A ++++ M   GV  D   Y  L++ Y R G+  +A      M   G  P  
Sbjct: 353 CKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGV 412

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
           + + +++  L EDG+++  + ++  M E+ V+ +      ++ A   RG +  AL     
Sbjct: 413 ATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRR 472

Query: 545 MMQSG 549
           MM+SG
Sbjct: 473 MMESG 477



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 12/280 (4%)

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A+++ D +  +E++  P    D  ASS   ++  L  +  T  A   F Q+ + GV ++ 
Sbjct: 221 ALRVFDHMRAREVV--P----DAHASS--ALLTALAKSRMTATARKVFDQMTRAGVAMNT 272

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             +N ++    K G+   A  ++  M   GVP D  ++  +I  Y RKG   +A    + 
Sbjct: 273 HVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRER 332

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M   G       + S++  L ++ RV+ AS++++ M   GV  +      +++     G 
Sbjct: 333 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGD 392

Query: 535 VEEAL---GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +EEA+   G ++ M     V  ++++L  L E GK      LL+    R    D  +   
Sbjct: 393 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT 452

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           +++A    G   +A  +  ++ME G   D  +   L+ G 
Sbjct: 453 LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGF 492


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 223/495 (45%), Gaps = 47/495 (9%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           + +V   L  ++ ++ A+   R ++ +G+   D  T+  +I  L    +L+ A  +L +M
Sbjct: 118 YTMVMRGLCASRRTDEAVALLRSMQASGV-RADVVTYGTLIRGLCDAAELDGALELLGEM 176

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              GV  +  ++  L+  Y + G  Q+  K+F+ M +LGVE  V  +      + ++GR 
Sbjct: 177 CGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRI 236

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +  + M+  G+EP   TYNV++        +  A+    +M  +G++ DVVTYNT+
Sbjct: 237 GKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTL 296

Query: 203 INGYNRFKKMDEAEKLFAEMKEKN--IEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           I G +   +MD A  L  EM + +  +EP V+++ ++I G   + R   A+ + + M   
Sbjct: 297 IAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAER 356

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
               N VTY  L+      G  + V KV                              N 
Sbjct: 357 GCMCNLVTYNYLI------GGFLRVHKV------------------------------NM 380

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A +++  +I   +  ++  Y ILI  F K    DRA   L  + ++ I          E 
Sbjct: 381 AMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGI--------RAEL 432

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
             Y P++  LC  G   +A + F ++     LD VA++ ++ G  K G+  +A ++++ M
Sbjct: 433 FHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDM 492

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  DA  Y  LI  + + G+  +A+  L  M   G  P  ++F S+++    +G++
Sbjct: 493 LDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQI 552

Query: 501 QTASRVMKSMVEKGV 515
                ++  M  K V
Sbjct: 553 NKILDLIHEMRAKNV 567



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/530 (23%), Positives = 221/530 (41%), Gaps = 48/530 (9%)

Query: 124 RSVKSYDALFKLILRRGRYM-MAKRYFNKMLSEG---IEPTRHTYNVMLWGFFLSLKLET 179
           R   SY+ +   + RRG  +  A      M  E      P   +Y +++ G   S + + 
Sbjct: 74  RDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDE 133

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A+     M++ G+  DVVTY T+I G     ++D A +L  EM    + P VI Y+ +++
Sbjct: 134 AVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLR 193

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY    R  D  ++F+EM    V+P+ + +T  +  LC  G++ +  KV   MV+R + P
Sbjct: 194 GYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEP 253

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            +   +  L+   CK G +  A  +   M    +  +   Y  LI         D A+ L
Sbjct: 254 -NVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGL 312

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN 419
           L+++++ + ++ P      +  ++N +I  LC  G+        RQ              
Sbjct: 313 LEEMIQGDTLVEP------DVVTFNSVIHGLCKIGR-------MRQ-------------- 345

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
                        A  + ++M  RG   +   Y  LI  +LR  +   A   +  +I  G
Sbjct: 346 -------------AISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSG 392

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P S  +  ++    +   V  A   +++M ++G++  L     +L AL   G +E+A+
Sbjct: 393 LEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAM 452

Query: 540 GRIDLM-MQSG-SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
              + M M  G     + +++    + G   AA +LL   L      D  +Y  +++   
Sbjct: 453 VLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFA 512

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN-TKQADILSRM 646
             G    A  +L ++   G V D    D LI G + EG   K  D++  M
Sbjct: 513 KLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEM 562



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 152/384 (39%), Gaps = 55/384 (14%)

Query: 321 AADVLKAMIRLS-IPT--EAGHYGILIENFCK--AEMYDRAIKLLDKLVEKEIILRPQST 375
           AA V +A   LS +P   +A  Y I++   C+   ++      L D   E     RP   
Sbjct: 57  AAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPN-- 114

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
               A SY  +++ LC + +T +A    R +   GV  D V +  LIRG       D A 
Sbjct: 115 ----AVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGAL 170

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           E++  M   GV  +   Y CL+  Y R G   D     + M   G  P   +F   ++ L
Sbjct: 171 ELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDL 230

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
            + GR+  A +V   MV++G++ N+     ++  L   G V EAL   + M   G  P+ 
Sbjct: 231 CKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDV 290

Query: 554 ---------------------------------------FDSLLSVLSEKGKTIAAVKLL 574
                                                  F+S++  L + G+   A+ + 
Sbjct: 291 VTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVR 350

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
           +    R C+ +L +Y  ++   L   K   A +++ +++  G   D  +   LI G ++ 
Sbjct: 351 EMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKL 410

Query: 635 GNTKQADILSRMIRGEMSRGSQKE 658
               +A++    +R    RG + E
Sbjct: 411 WEVDRAEMF---LRTMTQRGIRAE 431


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 222/509 (43%), Gaps = 34/509 (6%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI- 113
           D  T   +I      G LN     L  + K G++ D   F  L+ +   K    +++ I 
Sbjct: 12  DIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIV 71

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG--IEPTRHTYNVMLWGF 171
              M +LG    V SY  L K +    +   A    + M  +G    P   +Y+ ++ GF
Sbjct: 72  LRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGF 131

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           F    +  A   F  M   GI  +VVT N++I+G  + + MD+AE +  +M +++I P  
Sbjct: 132 FKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNC 191

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +Y ++I GY++  +  +A+RI  EM     +PN VTY  L+  LC +G   E +++   
Sbjct: 192 TTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNS 251

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M++   P  D + +  LL      G+L    +V   M++  + +    + I I  +CK  
Sbjct: 252 MIQSG-PKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             D A     K+  +++   P      +  +Y  +I  LC  G+   A   F Q++  G 
Sbjct: 311 RLDEASLTFIKM--QQLGFMP------DIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDG- 361

Query: 412 LDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           L P  + F  LI G S  G  + A E+   M  RG+P D   +  +I+   ++G+  +A+
Sbjct: 362 LSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQ 421

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQ-------------------TASRVMKSM 510
              D M   G  P    + +++   F  G V                    T + ++  M
Sbjct: 422 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 481

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEAL 539
           V  G+K ++D    ++++    G +E+ L
Sbjct: 482 VSMGLKPDVDTCKTLIDSCCEDGRIEDIL 510



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 163/362 (45%), Gaps = 16/362 (4%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +V  ++ A  +L  M  + +  +   +  LI  Y   G   E+V+I   M + G
Sbjct: 162 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 221

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +V +Y+ L   + + G +  A+  FN M+  G +P   TY  +L G+     L    
Sbjct: 222 QRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMN 281

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              + M   G+  +  T++  I  Y +  ++DEA   F +M++    P +++YTT+I G 
Sbjct: 282 NVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGL 341

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             + R DDA+  F +M    + PN +T+T L+ G    GK  + +++  EM++R IPP D
Sbjct: 342 CKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPP-D 400

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            ++F  ++    K G +  A  +   M R         Y  +I  +  A      +KLLD
Sbjct: 401 VTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 460

Query: 362 KLVEKEIILRPQST-------------LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
            ++   I L+P +              L  +  +   +I   C +G+       FR+++ 
Sbjct: 461 DML--LIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLG 518

Query: 409 KG 410
           K 
Sbjct: 519 KA 520



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/467 (22%), Positives = 187/467 (40%), Gaps = 50/467 (10%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK--NIEPTVISYTTMIKGYVAV 244
           M   G + DV +Y+T++ G    KK +EA +L   M E   N  P V+SY+T+I G+   
Sbjct: 75  MPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKE 134

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
                A  +F +M    + PN VT  +++ GL                            
Sbjct: 135 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGL---------------------------- 166

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
                   CK   ++ A  VL+ MI   I      Y  LI  +  +  +  A+++L ++ 
Sbjct: 167 --------CKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMS 218

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRG 423
                 RP         +YN +I  LC +G   +A   F  +++ G   D   + +L+ G
Sbjct: 219 RDG--QRPN------VVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHG 270

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
           ++ EGN      +  +M + G+  +   +   I +Y + G   +A      M + G  P 
Sbjct: 271 YATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPD 330

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + +V++ L + GR+  A      M++ G+  N+     ++    M G  E+A     
Sbjct: 331 IVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFY 390

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            MM  G  P+   F +++  L ++GK   A KL D         ++ SY  ++     AG
Sbjct: 391 EMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAG 450

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           +      +L  ++  G      + + L+ G+   G     D    +I
Sbjct: 451 EVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLI 497



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 156/327 (47%), Gaps = 19/327 (5%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           ++L++  L   + +E A++  + + R G    +  T+  +I+ L + G    AR I   M
Sbjct: 195 NSLIHGYLSSGQWTE-AVRILKEMSRDGQ-RPNVVTYNMLIDCLCKSGFHAEAREIFNSM 252

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            + G + D   +  L+  Y  +G + E   + D+M Q G+  +  ++        + GR 
Sbjct: 253 IQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRL 312

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   F KM   G  P   TY  ++ G     +L+ A+  F  M   G+S +++T+ T+
Sbjct: 313 DEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTL 372

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G++ + K ++AE+LF EM ++ I P V  +T MI       +  +A ++FD M     
Sbjct: 373 IHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGA 432

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           KPN V+Y  ++ G   AG++ EV K+L +M+              L+G++  +   N   
Sbjct: 433 KPNVVSYNTMIHGYFIAGEVGEVMKLLDDML--------------LIGLKPTAVTFNT-- 476

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCK 349
            +L  M+ + +  +      LI++ C+
Sbjct: 477 -LLDGMVSMGLKPDVDTCKTLIDSCCE 502



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 19/259 (7%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           +QN +R+    F    +Y      +  E +L F +  +    F  D  T+  +I+ L ++
Sbjct: 288 VQNGMRSNHHTFSIE-IYAYCKCGRLDEASLTFIKMQQLG--FMPDIVTYTTVIDGLCKI 344

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+L+ A      M   G+  +   F  LI  +   G  +++ ++F  M   G+   V  +
Sbjct: 345 GRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIF 404

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
            A+   + + G+   A++ F+ M   G +P   +YN M+ G+F++ ++   ++  +DM  
Sbjct: 405 TAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 464

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G+    VT+NT+++G                M    ++P V +  T+I       R +D
Sbjct: 465 IGLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKTLIDSCCEDGRIED 508

Query: 250 ALRIFDEMKSFDVKPNAVT 268
            L +F EM     K + +T
Sbjct: 509 ILTLFREMLGKADKTDTIT 527


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 148/638 (23%), Positives = 268/638 (42%), Gaps = 74/638 (11%)

Query: 28  NVLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEIL----GRVGKLNHARCILL 80
           +VL G  +S   + ALQ +R         + RE  L  + +L       G+++ AR +L 
Sbjct: 185 SVLVGLMDSGRIDEALQVYR--------ENRREPCLVTLNVLLEGFCSRGQVDKARELLR 236

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            MP +    DE  +  +++   K G V+E+V++F      G      S  +       RG
Sbjct: 237 AMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLF------GDRELPSSSSSSSSPPSLRG 290

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                                  YN+++ G   + +++ A++ FE M  R +S D  +Y 
Sbjct: 291 -----------------------YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYG 327

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G  +  K+++A  LF ++    + P+ ++YT++I G       DDA  +F +M   
Sbjct: 328 ILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 387

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLN 319
              P+ VTY  ++   C  G + E   ++++M+E  ++P  D   +  ++   CKS  + 
Sbjct: 388 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVP--DVVTYNTVMDGLCKSSRVE 445

Query: 320 AAADVLKAMIRLSI-PTEAGHYGIL--------IENFCKAEMYDRAIKLLDKLVEKEIIL 370
            A  +   M RL   P    H  I+        I+  C+    D A +LL ++ +   + 
Sbjct: 446 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHV- 504

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-NNLIRGHSKEGN 429
                   +  +Y+ +I  LC   +   A      ++K+     V   N LI G  K G 
Sbjct: 505 -------PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 557

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
              A E++  M   G   D   Y  L+  + R G+   A+  L  M+  G +P    + +
Sbjct: 558 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 617

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++  L +  R+  A  V   M   G   NL     ++      G V+  L     M+ +G
Sbjct: 618 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 677

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA----SYEKVLDALLAAGKT 602
             P+   + +L + L + G++  A+++L    GR+ +   A     Y   +D LL AGK 
Sbjct: 678 ISPDHVVYGTLAAELCKSGRSARALEILRE--GRESLRSEAWGDEVYRFAVDGLLEAGKM 735

Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             A   +  ++  G +   +    L+AGL + G   +A
Sbjct: 736 EMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 773



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 123/503 (24%), Positives = 217/503 (43%), Gaps = 24/503 (4%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+V   L      + A+Q F  +    + + D  ++  +I+ L + GKLN AR +   +
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNV-SPDSWSYGILIDGLAKAGKLNDARNLFQKL 349

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              GV      +  LI          ++ ++F  M + G   S  +Y+ +     +RG  
Sbjct: 350 LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGML 409

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A     KM+ +G  P   TYN ++ G   S ++E A+  F +M+  G + +  ++NT+
Sbjct: 410 EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTI 469

Query: 203 INGYNRFK---------KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           I G  +           K+DEA +L   M +    P V++Y+T+I G  ++ R DDA  +
Sbjct: 470 ILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 529

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
            ++M     KP  VT   L+ GLC AG++ E ++VL  MV     P D   +  L+   C
Sbjct: 530 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP-DVVTYNTLVHGHC 588

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           ++G    A ++L  M+   +      Y  L+   CKA     A  +  ++          
Sbjct: 589 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM--------KS 640

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDS 432
           S       +Y  +I   C  GQ       F +++  G+  D V +  L     K G    
Sbjct: 641 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 700

Query: 433 AFEIVKIMGRRGVPRDA---DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
           A EI++  GR  +  +A   + Y   ++  L  G+   A   +  M+  G  PA     S
Sbjct: 701 ALEILR-EGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCAS 759

Query: 490 VMESLFEDGRVQTASRVMKSMVE 512
           ++  L + G+   A  V++ +++
Sbjct: 760 LVAGLCKSGQGGEARAVLEEIMD 782



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 130/606 (21%), Positives = 240/606 (39%), Gaps = 112/606 (18%)

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M  +GI P    +  ++ G+    +   A++ F  M+        V YN +I+  ++ ++
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV-YNVLIDSLSKRQE 59

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP------- 264
            +  +K+   M ++   P   ++TT++ G     + D+A  + DEM+S  + P       
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 265 ------------------------NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                                   N+  Y  ++  LC A ++ +  ++ R M E+ IP  
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLA 179

Query: 301 DNSVFMKLLGVQ-------------------------------CKSGHLNAAADVLKAMI 329
             S+   L+G+                                C  G ++ A ++L+AM 
Sbjct: 180 AGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMP 239

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLL----------------------------- 360
                 +   Y  +++  CKA   + A++L                              
Sbjct: 240 DEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLC 299

Query: 361 --DKLVEKEIILRPQSTLDMEASS--YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
             D++ E   +    +  ++   S  Y  +I  L   G+   A   F++L+  GV    V
Sbjct: 300 QNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTV 359

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
           A+ +LI G     + D A E+   M RRG P     Y  +I++  ++G   +A   +  M
Sbjct: 360 AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 419

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN----------LDLVAKI 525
           IEDGH P    + +VM+ L +  RV+ A  +   M   G   N          L   +KI
Sbjct: 420 IEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKI 479

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
            +A   RG ++EA   +  M   G VP+   + +L+S L    +   A  LL+  + R C
Sbjct: 480 DQA-CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 538

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-D 641
              + +   ++  L  AG+   A  +L  ++  G   D  + + L+ G  + G T++A +
Sbjct: 539 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 598

Query: 642 ILSRMI 647
           +LS M+
Sbjct: 599 LLSDMV 604


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 132/540 (24%), Positives = 232/540 (42%), Gaps = 42/540 (7%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
            L G    + A Q  + + R G F  D  T+ K+I  L    K+  A  +  +M   GV 
Sbjct: 197 CLCGVGKFDKAFQLIKEMMRKG-FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 255

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            D   + +LI+S+ K G+++++  +F+ M+ +G   +V +Y AL    L+  +   A   
Sbjct: 256 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 315

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F++M+  G  P   TY  ++ G   +  +  A   +  +     S D   Y         
Sbjct: 316 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY--------- 366

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
                     F       + P V++Y  ++ G     + D A  + D M S   +PN + 
Sbjct: 367 ----------FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 416

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           Y AL+ G C AGK+   Q+V  +M +  Y+P      +  L+    K G L+ A  VL  
Sbjct: 417 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT--YTSLIDRMFKDGRLDLAMKVLSQ 474

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M++ S       Y  +I+  C+    ++A+KLL  + EK     P         +Y  +I
Sbjct: 475 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC--SPNVV------TYTALI 526

Query: 388 QHLCHNGQTGKAEI---FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
             L   G+ GK ++    F Q+ +KG   + V +  LI      G  D A  ++  M + 
Sbjct: 527 DGL---GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 583

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
             P+    Y C I+ + +      +   L+ M   G  P + ++  +++   + GR++ A
Sbjct: 584 YWPKYLQGYRCAIQGFSKSF--IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 641

Query: 504 SRVMKSMVE--KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
             + K M+E    VK + D+ A +++AL +   VEEA      M + G VP     + ++
Sbjct: 642 MELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLI 701



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/535 (21%), Positives = 227/535 (42%), Gaps = 39/535 (7%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  + ++M      P   TY  +L GF    +L    R    M + G + +   +N++++
Sbjct: 61  AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 120

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER------ADDALRIFDEMK 258
            Y   K    A KL   M      P  + Y   I      E+       D A +I+ EM 
Sbjct: 121 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 180

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           + +   N V        LC  GK  +  ++++EM+ +   P D S + K++   C +  +
Sbjct: 181 AANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP-DTSTYSKVITFLCHATKV 239

Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
             A  + + M  + +  +   Y ILI++FCKA + ++A  L +++  + +   P      
Sbjct: 240 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM--RSVGCSPTVV--- 294

Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI- 436
              +Y  +I       Q  +A   F +++  G   + V +  L+ G  K GN   AFE+ 
Sbjct: 295 ---TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 351

Query: 437 VKIMG---------------RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            K++G               R  +  +   Y  L++   +  +   A   LD+M+  G  
Sbjct: 352 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 411

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P   ++ ++++   + G++ +A  V   M + G   ++     +++ +   G ++ A+  
Sbjct: 412 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 471

Query: 542 IDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
           +  M++    PN   + +++  L   G++  A+KLL     + C  ++ +Y  ++D L  
Sbjct: 472 LSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGK 531

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
           AGK   +  +  ++  KG   ++ +   LI  L   G   +A    R++ GEM +
Sbjct: 532 AGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA----RLLLGEMKQ 582



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 168/357 (47%), Gaps = 18/357 (5%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  L++   K   V  + ++ D M   G E +   YDAL     + G+   A+  F +M 
Sbjct: 382 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 441

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P+ HTY  ++   F   +L+ A++    M     + +VVTY  MI+G  R  + +
Sbjct: 442 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 501

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A KL + M+EK   P V++YT +I G     + D +L +F +M      PN VTY  L+
Sbjct: 502 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 561

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK----SGHLNAAADVLKAMI 329
             LC AG + + + +L EM + Y P         L G +C     S    A+  +L+ M 
Sbjct: 562 NHLCAAGLLDKARLLLGEMKQTYWPK-------YLQGYRCAIQGFSKSFIASLGILEEME 614

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
                  A  YG+LI+ F KA   + A++L      KE++  P S++  +   Y  +IQ 
Sbjct: 615 SYGTVPIAPVYGMLIDCFSKAGRLEIAMEL-----HKEMMEVP-SSVKTDNDMYASLIQA 668

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           LC   Q  +A   + ++ ++G +  ++ F  LI+G  +    D A ++   +   GV
Sbjct: 669 LCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 158/346 (45%), Gaps = 6/346 (1%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           VY  L G  +S  +  +F   +R  L   +  T+  +++ L +  K++HA  +L  M   
Sbjct: 350 VYAKLIGTSDSADSDFYFPCEDRHTL-APNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 408

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G + +  +++ LI+ + K G +  + ++F  M + G   SV +Y +L   + + GR  +A
Sbjct: 409 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 468

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            +  ++ML +   P   TY  M+ G     + E A++    M+ +G S +VVTY  +I+G
Sbjct: 469 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 528

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +  K+D +  LF +M  K   P  ++Y  +I    A    D A  +  EMK       
Sbjct: 529 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 588

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
              Y   + G   +   +    +L EM E Y       V+  L+    K+G L  A ++ 
Sbjct: 589 LQGYRCAIQGF--SKSFIASLGILEEM-ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELH 645

Query: 326 KAMIRL--SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
           K M+ +  S+ T+   Y  LI+  C A   + A +L  ++  +  +
Sbjct: 646 KEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFV 691



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/517 (20%), Positives = 198/517 (38%), Gaps = 71/517 (13%)

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           LD V    MI+G       DEA      M+  +  P V++Y T++ G++  ++     RI
Sbjct: 40  LDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRI 99

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
            + M +    PN   + +L+   C+        K+L  M     PP    V+   +G  C
Sbjct: 100 INMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP-GYVVYNIFIGSIC 158

Query: 314 ------KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
                     L+ A  +   M+  +      +        C    +D+A +L+ +++ K 
Sbjct: 159 GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG 218

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
            +  P      + S+Y+ +I  LCH  +  KA + F+++   GV  D   +  LI    K
Sbjct: 219 FV--P------DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 270

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G  + A  + + M   G       Y  LI +YL+  +   A      M++ G  P    
Sbjct: 271 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 330

Query: 487 FRSVMESLFEDGRVQTASRVMKSMV----------------EKGVKENLDLVAKILEALL 530
           + ++++ L + G +  A  V   ++                   +  N+     +++ L 
Sbjct: 331 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 390

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA------------------ 569
               V+ A   +D M+ SG  PN   +D+L+    + GK  +                  
Sbjct: 391 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 450

Query: 570 -----------------AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
                            A+K+L   L   C  ++ +Y  ++D L   G++  A  +L  +
Sbjct: 451 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 510

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
            EKG   +  +   LI GL + G    + D+ ++M R
Sbjct: 511 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 547


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 218/482 (45%), Gaps = 35/482 (7%)

Query: 87  VQWDE--DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +Q++E  D+F  ++ES     I+       D  K L V   +K +D +  L         
Sbjct: 51  LQFNEALDLFTHMVESRPLPSII-------DFTKLLNVIAKMKKFDVVINLC-------- 95

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
                + +   G+    +T N+++  F  S +   A  F   M   G   D+VT+ ++IN
Sbjct: 96  -----DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G+    +M+EA  +  +M E  I+P V+ YTT+I         + AL +FD+M+++ ++P
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP 210

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + V YT+L+ GLC++G+  +   +LR M +R I P D   F  L+    K G    A ++
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP-DVITFNALIDAFVKEGKFLDAEEL 269

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              MIR+SI      Y  LI  FC     D A ++   +  K     P      +  +Y 
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF--P------DVVAYT 321

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I   C   +   A   F ++ +KG+  + + +  LI+G  + G P+ A E+   M  R
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIE---DGHSPASSLFRSVMESLFEDGRV 500
           GVP +   Y  L+      G+   A    + M +   DG +P    +  ++  L  +G++
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSV 560
           + A  V + M ++ +   +     I++ +   G V+ A+     +   G  PN  +  ++
Sbjct: 442 EKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501

Query: 561 LS 562
           +S
Sbjct: 502 IS 503



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 197/429 (45%), Gaps = 14/429 (3%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           +  NL+ N    +     A  F   + + G F  D  T   +I       ++  A  ++ 
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLG-FEPDIVTFTSLINGFCLGNRMEEAMSMVN 166

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M + G++ D  M+  +I+S  K G V  ++ +FD M+  G+   V  Y +L   +   G
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R+  A      M    I+P   T+N ++  F    K   A   + +M    I+ ++ TY 
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++ING+     +DEA ++F  M+ K   P V++YT++I G+   ++ DDA++IF EM   
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            +  N +TYT L+ G    GK    Q+V   MV R +PP   + +  LL   C +G +  
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT-YNVLLHCLCYNGKVKK 405

Query: 321 AADVLKAMIRLSIPTEAGH---YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           A  + + M +  +   A +   Y +L+   C     ++A+ + + + ++E        +D
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE--------MD 457

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
           +   +Y  +IQ +C  G+   A   F  L  KGV  + V +  +I G  +EG    A  +
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517

Query: 437 VKIMGRRGV 445
            + M   GV
Sbjct: 518 FRKMKEDGV 526



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/483 (22%), Positives = 216/483 (44%), Gaps = 18/483 (3%)

Query: 174 SLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
           SL+   A+  F  M +SR +   ++ +  ++N   + KK D    L   ++   +   + 
Sbjct: 50  SLQFNEALDLFTHMVESRPLP-SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLY 108

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +   ++  +    +   A     +M     +P+ VT+T+L+ G C   +M E   ++ +M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           VE  I P D  ++  ++   CK+GH+N A  +   M    I  +   Y  L+   C +  
Sbjct: 169 VEMGIKP-DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           +  A  LL  + +++I  +P      +  ++N +I      G+   AE  + ++++  + 
Sbjct: 228 WRDADSLLRGMTKRKI--KP------DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 413 DPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
             +  + +LI G   EG  D A ++  +M  +G   D  AY  LI  + +  +  DA   
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
              M + G +  +  + ++++   + G+   A  V   MV +GV  N+     +L  L  
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399

Query: 532 RGHVEEALGRIDLMMQ---SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
            G V++AL   + M +    G  PN   ++ LL  L   GK   A+ + +    R+  I 
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
           + +Y  ++  +  AGK  NA ++   +  KG   +  +   +I+GL +EG   +A +L R
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519

Query: 646 MIR 648
            ++
Sbjct: 520 KMK 522



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 41/200 (20%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
            K  + A++ F  + + GL   +  T+  +I+  G+VGK N A+ +   M  +GV  +  
Sbjct: 330 CKKVDDAMKIFYEMSQKGL-TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQL---GVERSVKSYDALF-------KL------- 135
            + VL+      G V++++ IF+ M++    GV  ++ +Y+ L        KL       
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448

Query: 136 ---------------------ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL- 173
                                + + G+   A   F  + S+G++P   TY  M+ G F  
Sbjct: 449 EDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508

Query: 174 SLKLETAIRFFEDMKSRGIS 193
            LK E  +  F  MK  G+S
Sbjct: 509 GLKHEAHV-LFRKMKEDGVS 527


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 139/625 (22%), Positives = 275/625 (44%), Gaps = 70/625 (11%)

Query: 29  VLHGAKNSEHALQFFRWVER---AGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           VL   ++ E  L+FF WV R   +G  N    + L  +++L R    +    +L +M  +
Sbjct: 66  VLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSL--LKLLARSRVFSEMEVVLENMRVE 123

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFD-IMKQLGVERSVKSYDALFKLILRRGRYMM 144
            +    +   ++I++Y   G+V+++++++  ++K       V + ++L  ++++ GR  +
Sbjct: 124 EMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEI 183

Query: 145 AKRYFNKMLSEGIEPTRHTYN----VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           A++ +++ML       R   N    +M+ G     KLE   +  ED   +G   +++ YN
Sbjct: 184 ARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYN 243

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV------AVER-------- 246
           T+I+GY +   M+ A  LF E+K K   PTV +Y  +I G+       A++R        
Sbjct: 244 TLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSR 303

Query: 247 ---------------------ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
                                   A+   + M     KP+ VTY  L+ G C  GK+ E 
Sbjct: 304 GLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEA 363

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH------ 339
            ++L + + + + P   S +  L+   CK G  + A++ L  M      TE GH      
Sbjct: 364 DQLLEQALGKGLMPNKFS-YTPLIHAYCKQGGYDRASNWLIEM------TERGHKPDLVT 416

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           YG L+     A   D A+ + +K++E+ +   P      +A  YN ++  LC   +   A
Sbjct: 417 YGALVHGLVVAGEVDVALTIREKMLERGVF--P------DAGIYNILMSGLCKKFKLPAA 468

Query: 400 EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           ++   +++ + VL D   +  L+ G  + GN D A ++ ++   +G+      Y  +I+ 
Sbjct: 469 KLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKG 528

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           Y + G   DA   ++ M +   +P    + +V++   +   +  A ++ + MV+   K N
Sbjct: 529 YCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN 588

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
           +     ++     +G +  +L     M   G VPN   +  L+    ++ K I A    +
Sbjct: 589 VVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFE 648

Query: 576 FCLGRDCIIDLASYEKVLDALLAAG 600
             L   C+ +  ++  +++     G
Sbjct: 649 EMLMNKCVPNDVTFNYLVNGFSKNG 673



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 155/614 (25%), Positives = 264/614 (42%), Gaps = 66/614 (10%)

Query: 46  VERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKG 105
           ++ AG    D  +   M++ L + GKL   R ++ D   +G   +   +  LI+ Y KKG
Sbjct: 194 IDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKG 253

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
            ++ +  +F  +K  G   +V++Y A+     ++G +    R   +M S G+      YN
Sbjct: 254 DMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYN 313

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
            ++   +    +  A+   E M   G   D+VTYNT+I+G  R  K+ EA++L  +   K
Sbjct: 314 TIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK 373

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            + P   SYT +I  Y      D A     EM     KP+ VTY AL+ GL  AG+ V+V
Sbjct: 374 GLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGE-VDV 432

Query: 286 QKVLRE-MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
              +RE M+ER + P D  ++  L+   CK   L AA  +L  M+  S+  +A  Y  L+
Sbjct: 433 ALTIREKMLERGVFP-DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 491

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + F +    D A KL +  +EK +               NP I                 
Sbjct: 492 DGFIRNGNLDEARKLFELTIEKGM---------------NPGI----------------- 519

Query: 405 QLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
                     V +N +I+G+ K G    A   +  M +R +  D   Y  +I+ Y+++ +
Sbjct: 520 ----------VGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHD 569

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              A+     M++    P    + S++      G +  + ++ + M   G+  N+   + 
Sbjct: 570 LDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSI 629

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS--------VLSEKGKTIAAVK- 572
           ++ +      + +A    + M+ +  VPN   F+ L++         +SEKG      K 
Sbjct: 630 LIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQ 689

Query: 573 --LLDFCLGRDCIID-----LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
              L+F  GR  I D      A+Y  +L  L   G    A  +  K+  KG + D  S  
Sbjct: 690 SMFLNF-FGR-MISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFV 747

Query: 626 KLIAGLNQEGNTKQ 639
            L+ G+  EG +K+
Sbjct: 748 ALLHGVCLEGRSKE 761



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 214/523 (40%), Gaps = 69/523 (13%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I    R GK++ A  +L     KG+  ++  +  LI +Y K+G    +    
Sbjct: 343 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWL 402

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M + G +  + +Y AL   ++  G   +A     KML  G+ P    YN+++ G    
Sbjct: 403 IEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKK 462

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            KL  A     +M  + +  D   Y T+++G+ R   +DEA KLF    EK + P ++ Y
Sbjct: 463 FKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGY 522

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             MIKGY       DA+   + MK   + P+  TY+ ++ G      +   QK+ REMV+
Sbjct: 523 NAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVK 582

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
               P +   +  L+   C+ G L+ +  + + M    +      Y ILI +FCK     
Sbjct: 583 MKCKP-NVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEA--- 638

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
              KL+D                                     A  F   LM K V + 
Sbjct: 639 ---KLID------------------------------------AASFFEEMLMNKCVPND 659

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V FN L+ G SK G              R +    + +        ++ + +        
Sbjct: 660 VTFNYLVNGFSKNGT-------------RAISEKGNEF--------QENKQSMFLNFFGR 698

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG-VKENLDLVAKILEALLMRG 533
           MI DG +P S+ + S++  L + G  +TA ++   M  KG + +++  VA +L  + + G
Sbjct: 699 MISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVA-LLHGVCLEG 757

Query: 534 HVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKL 573
             +E    +   +    +    N+ S+L     +G + A+V L
Sbjct: 758 RSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQGTSEASVIL 800



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 95/472 (20%), Positives = 186/472 (39%), Gaps = 78/472 (16%)

Query: 177 LETAIRFFEDMKSRGI---SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
           +E  ++FF D  SRG     ++   Y++++    R +   E E +   M+ + + PT  +
Sbjct: 73  VELGLKFF-DWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREA 131

Query: 234 YTTMIKGYVAVERADDALRIFD-EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
            + +I+ Y      + AL ++   +K++   P+ +   +LL  L   G++   +K+  EM
Sbjct: 132 MSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEM 191

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           +E           +   G +C   +                        I+++  CK   
Sbjct: 192 LE-----------IDGAGDRCVDNYSTC---------------------IMVKGLCKEGK 219

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
            +   KL++    +  I  P          YN +I   C  G    A   F +L  KG L
Sbjct: 220 LEEGRKLIEDRWGQGCI--PNIIF------YNTLIDGYCKKGDMEMANGLFIELKLKGFL 271

Query: 413 DPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
             V  +  +I G  K+G+  +   ++  M  RG+  +   Y  +I++  + G    A   
Sbjct: 272 PTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVET 331

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
           ++ MIE G  P    + +++     DG+V  A ++++  + KG+  N      ++ A   
Sbjct: 332 IEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCK 391

Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +G  + A   +  M + G  P                                DL +Y  
Sbjct: 392 QGGYDRASNWLIEMTERGHKP--------------------------------DLVTYGA 419

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           ++  L+ AG+   A +I  K++E+G   D    + L++GL ++     A +L
Sbjct: 420 LVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 471



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 60/307 (19%), Positives = 133/307 (43%), Gaps = 18/307 (5%)

Query: 354 DRAIKLLDKLVEKEIIL-------RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
           D A  +LD++ + E+ L       R Q +  +   +Y+ +++ L  +    + E+     
Sbjct: 61  DVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLEN- 119

Query: 407 MKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVK-IMGRRGVPRDADAYICLIESYLRKG 463
           M+   + P   A + +I+ +S  G  + A E+   ++       D  A   L+   ++ G
Sbjct: 120 MRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLG 179

Query: 464 EPADAKTALDSMIE---DGHSPASSLFRSVM-ESLFEDGRVQTASRVMKSMVEKGVKENL 519
               A+   D M+E    G     +    +M + L ++G+++   ++++    +G   N+
Sbjct: 180 RIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNI 239

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                +++    +G +E A G    +   G +P    + ++++   +KG   A  +LL  
Sbjct: 240 IFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLME 299

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
              R   +++  Y  ++DA    G  + A   +  ++E G   D  + + LI+G  ++G 
Sbjct: 300 MNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGK 359

Query: 637 TKQADIL 643
             +AD L
Sbjct: 360 VSEADQL 366


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 129/550 (23%), Positives = 246/550 (44%), Gaps = 36/550 (6%)

Query: 16  ALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE-----THLKMIEILGRV 69
           A+ P F  +N+V + L  A     AL  +R + R      DR      T       L R+
Sbjct: 137 AVSPSFRSYNVVLSTLARADCHADALLLYRRMLR------DRVPPTTFTFGVAARALCRL 190

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+   A  +L  M + G   D  +++ +I +   +G V E+  + D M  +G    V ++
Sbjct: 191 GRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTF 250

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L   +   GR   A R  ++M+++G  P+  TY  +L G   + + + A      M  
Sbjct: 251 NDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA----MLG 306

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           R   ++VV  NT+I G     K+  A +L+  M  K   P V +Y+ ++ G   + R   
Sbjct: 307 RLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGS 366

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A+R+ DEM+     PN VTY+ LL   C  G   + + +L +M+ +     ++  +  ++
Sbjct: 367 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFS-MNSQGYNGII 425

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              CK G L+ A  +++ M       +   Y  +I + C  ++ + A  +   L+E+ ++
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
                       +YN +I  L  NG+  +      +++  G  LD +++N LI+   KEG
Sbjct: 486 --------ANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEG 537

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           N D +  +++ M  +G+  +  +Y  LI    + G+  DA      M+  G +P    + 
Sbjct: 538 NVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYN 597

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH-----VEEALGRID 543
           +++  L + G    A  +++ +  + V  ++     +   +L+  H     +++A   +D
Sbjct: 598 TLINGLCKVGWTHAALNLLEKLPNENVHPDI-----VTYNILISWHCKVRLLDDAAMLLD 652

Query: 544 LMMQSGSVPN 553
             +  G VPN
Sbjct: 653 KAISGGIVPN 662



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 122/526 (23%), Positives = 230/526 (43%), Gaps = 20/526 (3%)

Query: 110 SVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           ++ + D M ++  V  S +SY+ +   + R   +  A   + +ML + + PT  T+ V  
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
                  +   A+     M   G   D V Y T+I+       + EA  L  EM      
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
             V ++  ++ G   + R  +A R+ D M +    P+ VTY  LL GLC   +  E   +
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKS-GHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
           L  +      P+ N V +  +   C + G L  A ++ + M     P +   Y IL+   
Sbjct: 305 LGRL------PEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGL 358

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           CK   +  A+++LD++ EK     P         +Y+ ++   C NG    A     Q++
Sbjct: 359 CKLGRFGSAVRMLDEMEEKGCA--PNIV------TYSTLLHSFCRNGMWDDARAMLDQML 410

Query: 408 KKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
            KG  ++   +N +I    K+G  D A  +V+ M  +G   D   Y  +I          
Sbjct: 411 AKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLME 470

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
           +A+    ++IE+G       + +++ +L  +GR Q   R+   M+  G + ++     ++
Sbjct: 471 EAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLI 530

Query: 527 EALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
           +AL   G+V+ ++  ++ M+  G  PN   ++ L++ L + GK   A++L    L +   
Sbjct: 531 KALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLT 590

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
            D+ +Y  +++ L   G T  A ++L K+  +    D  + + LI+
Sbjct: 591 PDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 636



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 115/531 (21%), Positives = 223/531 (41%), Gaps = 47/531 (8%)

Query: 79  LLD-MPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
           LLD MP++  V      + V++ +  +     +++ ++  M +  V  +  ++    + +
Sbjct: 128 LLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARAL 187

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            R GR   A      M   G  P    Y  ++        +  A    ++M   G + DV
Sbjct: 188 CRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADV 247

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL----- 251
            T+N ++ G     ++ EA +L   M  +   P+V++Y  +++G     +AD+A      
Sbjct: 248 NTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGR 307

Query: 252 --------------------------RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
                                      +++ M S    P+  TY+ L+ GLC  G+    
Sbjct: 308 LPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSA 367

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            ++L EM E+   P +   +  LL   C++G  + A  +L  M+       +  Y  +I 
Sbjct: 368 VRMLDEMEEKGCAP-NIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIY 426

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CK    D+A +L+ ++  K    +P      +  +YN MI HLC+N    +AE  FR 
Sbjct: 427 ALCKDGKLDQATRLVQEM--KSQGCKP------DICTYNTMIYHLCNNDLMEEAEHIFRN 478

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           L+++GV+ + + +N LI    + G       +   M   G   D  +Y  LI++  ++G 
Sbjct: 479 LIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGN 538

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              +   L+ M+  G  P +  +  ++  L + G+V+ A  + K M+ +G+  ++     
Sbjct: 539 VDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 598

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLD 575
           ++  L   G    AL  ++ +      P+  +   ++S   K    V+LLD
Sbjct: 599 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCK----VRLLD 645



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 196/472 (41%), Gaps = 56/472 (11%)

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           +D+  + FA      + P+  SY  ++      +   DAL ++  M    V P   T+  
Sbjct: 129 LDQMPRRFA------VSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 182

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
               LC  G+  +   +LR M      P D  ++  ++      G +  AA +L  M+ +
Sbjct: 183 AARALCRLGRAGDALALLRGMARHGCVP-DAVLYQTVIHALVAQGGVAEAAMLLDEMLLM 241

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
               +   +  L+   C       A +L+D+++ +  +  P         +Y  ++Q LC
Sbjct: 242 GCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCM--PSVV------TYGFLLQGLC 293

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
              Q  +A     +L +  V   V  N +IRG   EG    A E+ ++MG +G P D   
Sbjct: 294 RTRQADEACAMLGRLPEVNV---VMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHT 350

Query: 452 Y------IC-----------------------------LIESYLRKGEPADAKTALDSMI 476
           Y      +C                             L+ S+ R G   DA+  LD M+
Sbjct: 351 YSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQML 410

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G S  S  +  ++ +L +DG++  A+R+++ M  +G K ++     ++  L     +E
Sbjct: 411 AKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLME 470

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA      +++ G V N   +++L+  L   G+    ++L    L   C +D+ SY  ++
Sbjct: 471 EAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLI 530

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
            AL   G    + ++L +++ KG   +  S + LI  L + G  + A  LS+
Sbjct: 531 KALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSK 582



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 108/215 (50%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  MI  L     +  A  I  ++ ++GV  +   +  LI +  + G  QE +++ 
Sbjct: 452 DICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLA 511

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G +  V SY+ L K + + G    +     +M+++GI+P   +YN+++     +
Sbjct: 512 SEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKA 571

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            K+  A+   ++M ++G++ D+VTYNT+ING  +      A  L  ++  +N+ P +++Y
Sbjct: 572 GKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTY 631

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
             +I  +  V   DDA  + D+  S  + PN  T+
Sbjct: 632 NILISWHCKVRLLDDAAMLLDKAISGGIVPNERTW 666



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 126/255 (49%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F+ + + +  +I  L + GKL+ A  ++ +M  +G + D   +  +I       +++E+ 
Sbjct: 414 FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAE 473

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            IF  + + GV  +  +Y+ L   +LR GR+    R  ++ML  G +    +YN ++   
Sbjct: 474 HIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL 533

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
                ++ ++   E+M ++GI  +  +YN +IN   +  K+ +A +L  EM  + + P +
Sbjct: 534 CKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDI 593

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           ++Y T+I G   V     AL + +++ + +V P+ VTY  L+   C    + +   +L +
Sbjct: 594 VTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDK 653

Query: 292 MVERYIPPKDNSVFM 306
            +   I P + +  M
Sbjct: 654 AISGGIVPNERTWGM 668



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 88/185 (47%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L R G+      +  +M   G Q D   +  LI++  K+G V  S+ + + M
Sbjct: 490 TYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEM 549

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G++ +  SY+ L   + + G+   A     +ML++G+ P   TYN ++ G       
Sbjct: 550 VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 609

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A+   E + +  +  D+VTYN +I+ + + + +D+A  L  +     I P   ++  M
Sbjct: 610 HAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMM 669

Query: 238 IKGYV 242
           ++ +V
Sbjct: 670 VQNFV 674


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 157/601 (26%), Positives = 268/601 (44%), Gaps = 29/601 (4%)

Query: 62  MIEILGRVGKLNHARC---ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           ++ IL    K   +RC   I +   K+GV        +L+ S  K   + +S ++FD+  
Sbjct: 189 LLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLAC 248

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           Q GV   V ++        + GR   A   F KM   G+ P   TYN ++ G F S + E
Sbjct: 249 Q-GVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFE 307

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+RF + M    ++  VVTY  +I+G  + +  +EA ++  EM      P  + +  +I
Sbjct: 308 EALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALI 367

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            GY       +ALR+ DEM    +KPN VT+  LL G C + +M + ++VL      YI 
Sbjct: 368 DGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVL-----VYIL 422

Query: 299 PKDNSVFMKLLG-----VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
               SV M +       +  +SG ++A   V K ++  +I         L+   CK E +
Sbjct: 423 SSGLSVNMDVCSYVIHRLMERSGFVSALKIVTK-LLSGNIRVSDSLLTPLVVGLCKCEGH 481

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VL 412
             AI+L  KL   +        L     + N ++  LC  G   +     +Q+++KG +L
Sbjct: 482 SEAIELWFKLAAVK-------GLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLL 534

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D +++N LI G  K G  + AF++ + M ++    D   Y  L++     G+  D    L
Sbjct: 535 DRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLL 594

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
               E G  P    +  ++E   +  R++ A +  K++  + V E   +V  IL A   R
Sbjct: 595 HEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKV-ELSSVVYNILIAAYCR 653

Query: 533 -GHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
            G+V EA    D M   G +P    + SL+  +   G+   A ++ +       + ++  
Sbjct: 654 IGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFC 713

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           Y  ++      G+     SIL ++   G   +  +   +I G  + GN K+A ++L+ MI
Sbjct: 714 YTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMI 773

Query: 648 R 648
           R
Sbjct: 774 R 774



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 139/272 (51%), Gaps = 1/272 (0%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  M +KG+  D   +  LI    K G ++E+ K+ + M Q   +    +Y+ L K + 
Sbjct: 523 VLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLA 582

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
             G+     R  ++    G  P  +TY ++L G+  + ++E A++FF+++    + L  V
Sbjct: 583 DMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSV 642

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            YN +I  Y R   + EA KL   MK + I PT  +Y+++I G   + R D+A  IF+EM
Sbjct: 643 VYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEM 702

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           ++  + PN   YTAL+ G C  G+M  V  +L EM    I P   +  + + G  CK G+
Sbjct: 703 RNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDG-YCKLGN 761

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
           +  A ++L  MIR  I  +   Y  L + +CK
Sbjct: 762 MKEARELLNEMIRNGIAPDTVTYNALQKGYCK 793



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 129/593 (21%), Positives = 247/593 (41%), Gaps = 89/593 (15%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           S  A   F    + G+F   +  +L ++  L +  +L H    + D+  +GV  D   F 
Sbjct: 202 SRCAFDIFVMFSKRGVFPCLKTCNL-LLSSLVKANEL-HKSYEVFDLACQGVAPDVFTFT 259

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
             I ++ K G V ++V +F  M+ LGV  +V +Y+ +   + + GR+  A R+ ++M+  
Sbjct: 260 TAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRS 319

Query: 156 GIEPTRHTYNVMLWGFFLSLKLET------------------------------------ 179
            + P+  TY V++ G    +KLE                                     
Sbjct: 320 KVNPSVVTYGVLISGL---MKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDM 376

Query: 180 --AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE--------------------- 216
             A+R  ++M  +G+  + VT+NT++ G+ R  +M++AE                     
Sbjct: 377 GEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYV 436

Query: 217 --------------KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD- 261
                         K+  ++   NI  +    T ++ G    E   +A+ ++ ++ +   
Sbjct: 437 IHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKG 496

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           +  N VT  ALL GLC+ G M EV +VL++M+E+ +   D   +  L+   CK G +  A
Sbjct: 497 LAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLL-LDRISYNTLIFGCCKWGKIEEA 555

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             + + M++     +   Y  L++        D   +LL +   KE    P         
Sbjct: 556 FKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHE--AKEYGFVPN------VY 607

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQL-MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y  +++  C   +   A  FF+ L  +K  L  V +N LI  + + GN   AF++   M
Sbjct: 608 TYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAM 667

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             RG+      Y  LI      G   +AK   + M  +G  P    + +++    + G++
Sbjct: 668 KSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQM 727

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
                ++  M   G++ N      +++     G+++EA   ++ M+++G  P+
Sbjct: 728 DIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPD 780



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 141/296 (47%), Gaps = 5/296 (1%)

Query: 29  VLHGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           +LHG     N E   +  + +   GL   DR ++  +I    + GK+  A  +  +M ++
Sbjct: 507 LLHGLCERGNMEEVFEVLKQMLEKGLL-LDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQ 565

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
             Q D   +  L++     G + +  ++    K+ G   +V +Y  L +   +  R   A
Sbjct: 566 EFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDA 625

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            ++F  +  E +E +   YN+++  +     +  A +  + MKSRGI     TY+++I+G
Sbjct: 626 VKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHG 685

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
                ++DEA+++F EM+ + + P V  YT +I G+  + + D    I  EM S  ++PN
Sbjct: 686 MCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPN 745

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +TYT ++ G C  G M E +++L EM+   I P D   +  L    CK   L   
Sbjct: 746 KITYTIMIDGYCKLGNMKEARELLNEMIRNGIAP-DTVTYNALQKGYCKERELTVT 800


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 226/544 (41%), Gaps = 44/544 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ S  K       + +   M   G+   V + + L        R   A     K+L
Sbjct: 153 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 212

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G +P   T+N ++ G  +  K+  A+  F+     G   DVVTY T++NG  +     
Sbjct: 213 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 272

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A +L   M +KN  P VI+Y T+I       +  +A  +F EM +  + P+  TY +L+
Sbjct: 273 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 332

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC+  +   V  +L EMV   I P +  VF  ++   CK G +  A DV+  MI+  +
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMP-NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV 391

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y  L++  C     D A+K+ D +V K  +  P         SYN +I   C  
Sbjct: 392 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV--PN------VRSYNILINGYCQI 443

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  KA     Q+  +G++ D V +N LI G    G    A  +   M   G   D   Y
Sbjct: 444 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 503

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV-MESLFEDGRVQTASRVMKSMV 511
             L++   +    A+A   L + IE  +  A  L  ++ ++ +   G ++ A  +  ++ 
Sbjct: 504 RILLDYLCKNHHLAEAMVLLKA-IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 562

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAV 571
            KG++ ++     ++  L  RG ++EA                + L   + E G      
Sbjct: 563 SKGLQPDVRTYNIMIHGLCKRGLLDEA----------------NKLFRKMDENG------ 600

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
                C    CI     Y  ++   L + +T  A  +L +++ +G   D  ++  ++  L
Sbjct: 601 -----CSRDGCI-----YNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEML 650

Query: 632 NQEG 635
           + +G
Sbjct: 651 SDDG 654



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 194/473 (41%), Gaps = 29/473 (6%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I     + +L +A  +L  + K G Q D   F  LI     +G + E++ +FD     G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            +  V +Y  L   + + G    A R    M+ +   P    YN ++       ++  A 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F +M ++GIS D+ TYN++I+      +      L  EM    I P V+ ++T++   
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                   A  + D M    V+P+ VTYTAL+ G C   +M E  KV   MV +   P  
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            S +  L+   C+   ++ A  +L+ M    +  +   Y  LI   C       AI L  
Sbjct: 431 RS-YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 489

Query: 362 KLV-------------------------EKEIILRP--QSTLDMEASSYNPMIQHLCHNG 394
           ++V                         E  ++L+    S LD +   YN  I  +C  G
Sbjct: 490 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 549

Query: 395 QTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +   A   F  L  KG+   V  +N +I G  K G  D A ++ + M   G  RD   Y 
Sbjct: 550 ELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYN 609

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            +I  +LR  E   A   L  M+ +G S   S    ++E L +DG  Q+  R+
Sbjct: 610 TIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERL 662



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/419 (20%), Positives = 174/419 (41%), Gaps = 45/419 (10%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N + + L   +    A   F  +   G+ + D  T+  +I  L  + +  H   +L +M
Sbjct: 293 YNTIIDSLCKDRQVTEAFNLFSEMITKGI-SPDIFTYNSLIHALCNLCEWKHVTTLLNEM 351

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
               +  +  +F  ++++  K+G++  +  + D+M + GVE  V +Y AL      R   
Sbjct: 352 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 411

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A + F+ M+ +G  P   +YN+++ G+    +++ A+   E M  +G+  D VTYNT+
Sbjct: 412 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 471

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G     ++  A  LF EM      P +++Y  ++          +A+ +   ++  ++
Sbjct: 472 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             + + Y   + G+C AG+                                    L AA 
Sbjct: 532 DADILVYNIAIDGMCRAGE------------------------------------LEAAR 555

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
           D+   +    +  +   Y I+I   CK  + D A KL  K+ E        +    +   
Sbjct: 556 DLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE--------NGCSRDGCI 607

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN +I+    + +T  A    ++++ +G    V+   LI     +   D +FE +++ G
Sbjct: 608 YNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERLRLRG 666


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 225/489 (46%), Gaps = 19/489 (3%)

Query: 15  RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERA--GLFNHDRETHLKMIEILGRVGKL 72
           R LVP    N V  VL   K+ + +L FFRWV R+  G   H+  T   ++  L +  + 
Sbjct: 30  RNLVP----NTVGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRH 85

Query: 73  NHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           + A  I  D +  +    +   +  LI  + K G ++ + ++   MK+ G    V ++ +
Sbjct: 86  HQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSS 145

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           + + +   G    A +YF +  S    P    +N+++ G   + +L  A +  E+M  RG
Sbjct: 146 IVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERG 203

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I  DVVTYN++I+G  +  +M+EA +L   M ++ + P +++Y T+I GY        A 
Sbjct: 204 IVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAH 263

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           ++ + M      P+ VT+ +L+ G C   K+ +  +VL  M +    P +   +  L+  
Sbjct: 264 QLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAP-NLVTYNVLISG 322

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            C +G  N A ++L  M    I  +   Y  LI  FC+    ++A ++ + +VE+ +I  
Sbjct: 323 LCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVI-- 380

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNP 430
           P      +  SY  +   L  + +  +A      +   G + +   FN+L+ G       
Sbjct: 381 P------DGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRL 434

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D A  ++ +M R G    A  Y  L+    + G   DAK  L  M+ +G  P  S   ++
Sbjct: 435 DEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTI 494

Query: 491 MESLFEDGR 499
           + +L  +G+
Sbjct: 495 VHTLAREGK 503



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 222/472 (47%), Gaps = 16/472 (3%)

Query: 128 SYDALFKLILRRGRYMMAKRYF-NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           + + L + +++  R+  A + F +++L +  +    TYN ++ GF  +  +E A +   +
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           MK RG S DVVT+++++        +  A + F E  E    P  + +  ++ G     +
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQ 188

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
             +A ++ +EM    + P+ VTY +L+ GLC + +M E +++L  MV+R + P +   + 
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRP-NLVTYN 247

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+   CK+G    A  +++ MI+     +   +  LI  FC+    D+A ++L  +  K
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM--K 305

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHS 425
           + +  P         +YN +I  LC  G+  +A     ++  +G+L D + +N+LI    
Sbjct: 306 KGLCAPNLV------TYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFC 359

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           +    + AF+I  +M  RGV  D  +Y  L  + L+     +A   LD+M + G  P   
Sbjct: 360 RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLF 419

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            F S+ME L    R+  A  ++  M   G          ++  L   G V++A   + +M
Sbjct: 420 TFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMM 479

Query: 546 MQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           +  G  P   S   ++  L+ +GK   A+   D  +  +      SY+K+L+
Sbjct: 480 VSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLE 531



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 215/480 (44%), Gaps = 55/480 (11%)

Query: 163 TYNVMLWGFFLSLKLETAIRFFED-MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
           T N +L     + +   A + F D +  +    + +TYNT+I G+ +   M+ A +L AE
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           MKE+   P V++++++++          A++ F E  S +  P++V +  L+ GLC A +
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQ 188

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           + E ++++ EM ER I P D   +  L+   CKS  +  A  +L+ M++  +      Y 
Sbjct: 189 LSEARQMIEEMSERGIVP-DVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-E 400
            LI  +CK      A +L+++++        QS    +  ++N +I   C   +  KA E
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMI--------QSGTHPDVVTFNSLISGFCQKSKIDKACE 299

Query: 401 IFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           +    LMKKG+  P  V +N LI G    G  + A E++  M  RG+  D   Y  LI  
Sbjct: 300 VL--HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGI 357

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           + R                                   + +++ A ++   MVE+GV  +
Sbjct: 358 FCR-----------------------------------NFQIEQAFQIQNLMVERGVIPD 382

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
                 +  ALL     +EA   +D M  +G++PN   F+SL+  L    +   A  LL 
Sbjct: 383 GISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLA 442

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
                 C    ++YE ++  L  AG+  +A  +L  ++ +G      SS  ++  L +EG
Sbjct: 443 VMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREG 502



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 192/420 (45%), Gaps = 21/420 (5%)

Query: 23  HNLVYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           +++ YN L G    A + E A Q    ++  G  + D  TH  +++ L   G L+ A   
Sbjct: 104 NHITYNTLIGGFCKAGDMERAFQLLAEMKERG-HSPDVVTHSSIVQALCNTGNLSRA--- 159

Query: 79  LLDMPKKGVQWDED--MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            +   ++ V+   D  +F +L+    K   + E+ ++ + M + G+   V +Y++L   +
Sbjct: 160 -MQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGL 218

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            +  R   A++    M+   + P   TYN +++G+  +     A +  E M   G   DV
Sbjct: 219 CKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDV 278

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VT+N++I+G+ +  K+D+A ++   MK+    P +++Y  +I G     RA++A  +  E
Sbjct: 279 VTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE 338

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    + P+ +TY +L+   C   ++ +  ++   MVER + P D   +  L     KS 
Sbjct: 339 MDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIP-DGISYCTLAVALLKSE 397

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
             + A  +L  M           +  L+E  C +   D A  LL        ++R +   
Sbjct: 398 RFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLL-------AVMR-RVGC 449

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFN-NLIRGHSKEGNPDSAFE 435
           D  AS+Y  ++  LC  G+   A+     ++ +G+   V+ +  ++   ++EG  D A  
Sbjct: 450 DPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALH 509



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 159/371 (42%), Gaps = 14/371 (3%)

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N  T   LL  L  A +  +  ++ R+ +       ++  +  L+G  CK+G +  A  +
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
           L  M       +   +  +++  C      RA++   + VE      P S L      +N
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE----CAPDSVL------FN 177

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            ++  LC   Q  +A     ++ ++G++ D V +N+LI G  K    + A ++++ M +R
Sbjct: 178 ILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKR 237

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
            V  +   Y  LI  Y + G    A   ++ MI+ G  P    F S++    +  ++  A
Sbjct: 238 KVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKA 297

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSV 560
             V+  M +     NL     ++  L   G   EA   +  M   G +P+   ++SL+ +
Sbjct: 298 CEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGI 357

Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
                +   A ++ +  + R  I D  SY  +  ALL + +   A+++L  + + G + +
Sbjct: 358 FCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPN 417

Query: 621 WKSSDKLIAGL 631
             + + L+ GL
Sbjct: 418 LFTFNSLMEGL 428



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 10/244 (4%)

Query: 48  RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV 107
           + GL   +  T+  +I  L   G+ N A  +L +M  +G+  D   +  LI  + +   +
Sbjct: 305 KKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQI 364

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
           +++ +I ++M + GV     SY  L   +L+  R+  A    + M   G  P   T+N +
Sbjct: 365 EQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSL 424

Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
           + G   S +L+ A      M+  G      TY  ++ G  +  ++D+A+++   M  + I
Sbjct: 425 MEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGI 484

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
           +P V S  T++       + D AL  FD++ + + K    +Y           K++E  K
Sbjct: 485 QPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQ----------KLLEFVK 534

Query: 288 VLRE 291
           VLRE
Sbjct: 535 VLRE 538


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 134/572 (23%), Positives = 244/572 (42%), Gaps = 49/572 (8%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           F   V+R    + D  T+  ++  L +   ++ A  IL  M  KGV  D   +  LI  Y
Sbjct: 239 FNEMVQRG--ISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGY 296

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
              G  +E+V++   M   G+   V + ++L   + + G+   A+  F+ M  +G +   
Sbjct: 297 SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDI 356

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
            +Y +ML G+     L      F  M S GI+ D   +N +I  Y +   +D A  +F E
Sbjct: 357 FSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNE 416

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M+E+ +EP V++Y+T+I     + + DDA+  F++M    V P+  TY  L+ G C  G 
Sbjct: 417 MREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGD 476

Query: 282 MVEVQKVLREMVERYIPP----------------------------------KDNSVFMK 307
           +++ + ++ +M+ + + P                                   +  V+  
Sbjct: 477 LLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNT 536

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   C  G +  A  V   M+   I      YG L+  +CK    D  + L  +++ K 
Sbjct: 537 LMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG 596

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
           I  +P +TL      YN ++  L   G+T  A++ F ++ + G+ +D   ++ ++ G  K
Sbjct: 597 I--KPSTTL------YNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFK 648

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
               D A  + K +    V  D      +I    +     +AK    S+   G  P+   
Sbjct: 649 NSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVT 708

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKE-NLDLVAKILEALLMRGHVEEA---LGRI 542
           +  +M +L ++G V+ A  +  SM   G ++ N  L+  ++  LL +  +  A   L +I
Sbjct: 709 YSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKI 768

Query: 543 DLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
           D    S        L+ + S KG     ++ L
Sbjct: 769 DERSFSLDHSTTTLLIDLFSSKGTCREHIRFL 800



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/565 (23%), Positives = 245/565 (43%), Gaps = 47/565 (8%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFKLILRRGRY 142
           K G+  D  M   L+    +     E++ I    M  LG    V SY  + K +    + 
Sbjct: 136 KTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKS 195

Query: 143 MMAKRYFNKMLSEG---IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
             A     +M++EG     P    YN ++ GFF    +  A   F +M  RGIS D+ TY
Sbjct: 196 GQADELL-RMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTY 254

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N ++N   + + MD+AE +  +M +K + P   +Y ++I GY +  +  +A+R+  +M S
Sbjct: 255 NCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTS 314

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + P+ VT  +L+  LC  GK+ + + V   M  +       S  + L G   K G L 
Sbjct: 315 QGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATK-GCLV 373

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
              ++   M+   I  ++  + +LI+ + K  M DRA  + +++ E+ +        + +
Sbjct: 374 DLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGV--------EPD 425

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVK 438
             +Y+ +I  LC  G+   A   F Q++ +GV   ++ ++ LI+G    G+   A ++V 
Sbjct: 426 VVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVL 485

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  +G+  D   +  +I +  + G   DA+   D  I  G  P   ++ ++M+     G
Sbjct: 486 QMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVG 545

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL 558
           +++ A RV   MV  G++ N+ +   ++      G ++E L     ++  G  P+     
Sbjct: 546 KMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPS----- 600

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
                                         Y  +L  L  AG+T+ A     ++ E G  
Sbjct: 601 ---------------------------TTLYNIILHGLFQAGRTVPAKVKFHEMTESGIA 633

Query: 619 TDWKSSDKLIAGLNQEGNTKQADIL 643
            D  +   ++ GL +   + +A +L
Sbjct: 634 MDRYTYSIVLGGLFKNSCSDEAILL 658



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/539 (23%), Positives = 228/539 (42%), Gaps = 12/539 (2%)

Query: 18  VPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFN-HDRETHLKMIEILGRVGKLNHA 75
           VP  F + +V   L   + S  A +  R +   G     +   +  +I+   + G +N A
Sbjct: 176 VPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKA 235

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
             +  +M ++G+  D   +  ++ +  K   + ++  I   M   GV     +Y++L   
Sbjct: 236 CDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYG 295

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
               G++  A R   KM S+GI P   T N ++       K++ A   F+ M  +G   D
Sbjct: 296 YSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTD 355

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           + +Y  M+NGY     + +  +LF  M    I P    +  +IK Y      D A  IF+
Sbjct: 356 IFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFN 415

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM+   V+P+ VTY+ ++  LC  GKM +  +   +M+++ + P  ++    + G  C  
Sbjct: 416 EMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGF-CTH 474

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G L  A D++  M+   +  + G +  +I N CK      A  + D  +   I L P   
Sbjct: 475 GDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTI--SIGLHPNVM 532

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
           +      YN ++   C  G+   A   F  ++  G+  + V +  L+ G+ K G  D   
Sbjct: 533 V------YNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGL 586

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            + + +  +G+      Y  ++    + G    AK     M E G +     +  V+  L
Sbjct: 587 SLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGL 646

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           F++     A  + K +    VK ++  +  ++  +     VEEA      + +SG VP+
Sbjct: 647 FKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPS 705



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/426 (21%), Positives = 192/426 (45%), Gaps = 14/426 (3%)

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           R +S  + TY  +++   R  +       F ++ +  +    I  + +++G    +R  +
Sbjct: 102 RVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAE 161

Query: 250 ALRIF-DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMK 307
           AL I    M      P+  +Y  +L  LC   K  +  ++LR M E       N+V +  
Sbjct: 162 ALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNT 221

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++    K G +N A D+   M++  I  +   Y  ++   CKA   D+A  +L ++V+K 
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
           ++  P +       +YN +I      GQ  +A    +++  +G+L D V  N+L+    K
Sbjct: 282 VL--PDNW------TYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G    A ++   M  +G   D  +Y  ++  Y  KG   D     + M+ DG +P S +
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F  ++++  + G +  A+ +   M E+GV+ ++   + ++ AL   G +++A+ + + M+
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453

Query: 547 QSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
             G  P+  +   L+      G  + A  L+   + +    D+  +  +++ L   G+ +
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513

Query: 604 NAYSIL 609
           +A +I 
Sbjct: 514 DAQNIF 519


>gi|224124330|ref|XP_002329996.1| predicted protein [Populus trichocarpa]
 gi|222871421|gb|EEF08552.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 141/658 (21%), Positives = 295/658 (44%), Gaps = 46/658 (6%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           KI++L  +   + +  VL    +   A++ F+W      FNH  +T+  +I  LG  G +
Sbjct: 49  KIQSLRNKLYPDNLIKVLKSTSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMAGNV 108

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
                   +M K+    +ED+   L++++ +   + E++++   M   G++ S+  ++ +
Sbjct: 109 EEMEGFCQNMVKERCTGEEDVLVSLVDAFVRNCRLNEAMRVLFNMNLAGIKPSIDVFNFV 168

Query: 133 FKLILRRGR-YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
              ++   R +      + +M+  G+ P+  T N +L   F + ++++A+  +  +  +G
Sbjct: 169 LGALVEEKRGFQDVVFVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKG 228

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
              D  T+  +I G     ++D++  +  EM E    P +  Y T I  +   +R ++ +
Sbjct: 229 CRPDGKTFEIVIKGLIANDRVDDSVSILHEMLELGCLPELSFYRTTIPLFCREDRLEEGI 288

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+F +MK  +  P++  Y AL+  LC   ++ E   +L EM+E  +   DN+VF+ ++  
Sbjct: 289 RLFRKMKESNFTPDSFIYGALIQCLCKQLRLDEAVNLLEEMMESQL-EGDNNVFVDVVNG 347

Query: 312 QCKSGHLNAAADVLK-----------AMIRLSIPT-------------------EAGHYG 341
            CK G +N A  +L+           A++R                        +   + 
Sbjct: 348 FCKLGKINEAVKLLEDKHVLETSPHNALLRCCCDADKFLMAKGLLEKMSERNIDDCDSWN 407

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
           ILI   C+ E   +A +LL +++         S+L  + ++Y+ ++   C   +   A  
Sbjct: 408 ILIRWLCEREEMVKAYELLGRMI--------ISSLIPDYATYSALVAGNCRLSKYEDALQ 459

Query: 402 FFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F QL  K  +LDP +++ LI G  +      A ++   M        +  +I LI+   
Sbjct: 460 LFLQLHAKCWILDPASYSELIEGLCRGEKYLEAVKVFCYMSENRCSLQSLPFIMLIKGIC 519

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
             G   +A          G S  ++ +  VM  L +  + +     +  M+ +G   N +
Sbjct: 520 DMGMIGEAVRLQSLAYNSGTSCVNATYNYVMLRLSKSEQGRHVLAFLSRMLVQGGNLNTE 579

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGR 580
               ++++L+ +  +++    +++M+  G VP+ D+L ++LS   K  + + L+   L +
Sbjct: 580 AYCILIQSLIAQNRIKDCSMFLNVMINKGLVPDSDTLYNLLSCLAKH-SQLYLISVSLDK 638

Query: 581 ---DC-IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
              DC ++D A Y  +++ +   G   +A  +L  ++EKG V D  +   LI   + E
Sbjct: 639 LASDCEVLDSAMYNILINGMWKEGNKNDARRLLDLMLEKGWVPDAMTHGLLIGSADME 696


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 206/461 (44%), Gaps = 16/461 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+   I+ L +VG    A  ++ ++ +K    +   F  +I    + GI+ E+ ++F  M
Sbjct: 247 TYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEM 306

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K  G+   V SY  L     R+GR   A   F +M + GI P  ++Y++++ GF    ++
Sbjct: 307 KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRV 366

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+  FE+MK+ GI  DV +Y+ +I+G+ R   MD A K + EM   N  P+  +Y ++
Sbjct: 367 DKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSL 426

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC---DAGKMVEVQKVLREMVE 294
           IKGY   ++  +AL+ F  M+   + P+ +    +L   C   D  K + + +  +E   
Sbjct: 427 IKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGV 486

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
            + P   N    ++    C+      A  +L  M++ ++  +  +Y  LI  F K    +
Sbjct: 487 HFNPYSYNEFIHRI----CRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSE 542

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
           +A+ L  K+ +  I             +Y  +I     + +   A   F+ + +  V  D
Sbjct: 543 KAVMLFIKMTKVGITF--------NVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPD 594

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            +A+ +L+ G    G    A  +   M R G   +   Y C I  YL+  +   A    +
Sbjct: 595 QIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYE 654

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
            M E G  P   L+  ++ +    G +  A  +   M ++G
Sbjct: 655 KMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEG 695



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 205/508 (40%), Gaps = 46/508 (9%)

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
           P+  +     M        G    ++ + +I   +   G   +V +Y    K + + G +
Sbjct: 202 PRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLF 261

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
            +A R    +  +      H +N +++G      L+ A   F++MK+ GI  DV +Y+ +
Sbjct: 262 GVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSIL 321

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G+ R  ++D+A ++F EM+   I P + SY+ +I G+    R D AL +F+EMK+  +
Sbjct: 322 IDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGI 381

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            P+  +Y+ L+ G C  G M    K   EM      P   + +  L+    KS     A 
Sbjct: 382 LPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFN-YCSLIKGYYKSKQFANAL 440

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
              + M +L +  +      ++  +C+   +++A+ L +K  E  +   P         S
Sbjct: 441 KEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPY--------S 492

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNP----------- 430
           YN  I  +C      KA      ++K+ VL D V ++ LI   +K  N            
Sbjct: 493 YNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT 552

Query: 431 ------------------------DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
                                   D A+ + K M    V  D  AY  L+  +   GE  
Sbjct: 553 KVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMT 612

Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
            A+   D M  +G SP    +   +    +  +   A ++ + M E+GV  +  L   ++
Sbjct: 613 RARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLI 672

Query: 527 EALLMRGHVEEALGRIDLMMQSG-SVPN 553
            A    G +  A    D M Q G   PN
Sbjct: 673 AAFCNTGEMNRAEALFDEMKQEGRCTPN 700



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 132/607 (21%), Positives = 241/607 (39%), Gaps = 88/607 (14%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +LLD+ K  V     +F++LI+ +    +++ +  +F   K  G+E ++ S + L K ++
Sbjct: 128 LLLDVEKSNV-----VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLV 182

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL-----SLKLETAIRFFEDMKSRGI 192
              R    +  F  ++  G  P  HTY +M+  FF      S+ +  A      +   G 
Sbjct: 183 EDNRVDGVRLLFEVLIKFGPRPNIHTYTIMM-NFFCRGVGCSVDIRRASEILGKIYMSGE 241

Query: 193 SLDVVTYNTMINGY--------------NRFKK---------------------MDEAEK 217
           + +VVTY T I G               N  +K                     +DEA +
Sbjct: 242 TPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASE 301

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           +F EMK   I P V SY+ +I G+    R D A  +F EM++  + PN  +Y+ L+ G C
Sbjct: 302 VFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFC 361

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             G++ +  +V  EM    I P D   +  L+   C+ G +++A    + M   +    A
Sbjct: 362 KEGRVDKALEVFEEMKNSGILP-DVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSA 420

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
            +Y  LI+ + K++ +  A+K  +  + +++ + P +       + N ++   C      
Sbjct: 421 FNYCSLIKGYYKSKQFANALK--EFRIMQKLGMWPDTI------ACNHILSIYCRKPDFN 472

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           KA     +  + GV  +P ++N  I    +   P+ A +++ +M +R V  D   Y  LI
Sbjct: 473 KALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLI 532

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
             + ++     A      M + G +     +  ++     D ++  A R+ K M E  V 
Sbjct: 533 SCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVY 592

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDF 576
            +      ++      G +  A    D M + G  PN                       
Sbjct: 593 PDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPN----------------------- 629

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
                    + +Y   ++  L   K   A+ +  K+ E+G   D      LIA     G 
Sbjct: 630 ---------VVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGE 680

Query: 637 TKQADIL 643
             +A+ L
Sbjct: 681 MNRAEAL 687



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/477 (21%), Positives = 211/477 (44%), Gaps = 31/477 (6%)

Query: 162 HTYNV--MLWGFFLSLKLETAIRFFEDMKSRG----ISLDV----VTYNTMINGYNRFKK 211
           HTY +  M W  F+ ++ +    + E+ +  G    + LDV    V ++ +I  +     
Sbjct: 93  HTYALAGMSWEVFILIR-DIVTFYKEENRDAGELVSLLLDVEKSNVVFDMLIKVFASNSM 151

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           ++ A  +F   K+  IE  ++S   ++K  V   R D    +F+ +  F  +PN  TYT 
Sbjct: 152 LEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTI 211

Query: 272 LLPGLC-DAGKMVEVQKVLREMVERYIPPKDNSV--FMKLLGVQCKSGHLNAAADVLKAM 328
           ++   C   G  V++++    + + Y+  +  +V  +   +   CK G    A  +++ +
Sbjct: 212 MMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNL 271

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
            R + P     +  +I   C+  + D A ++  ++    I+         +  SY+ +I 
Sbjct: 272 CRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGIL--------PDVYSYSILID 323

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
             C  G+  +A   F+++   G+L  + +++ LI G  KEG  D A E+ + M   G+  
Sbjct: 324 GFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILP 383

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D  +Y  LI+ + RKG+   A    + M  +  SP++  + S+++  ++  +   A +  
Sbjct: 384 DVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEF 443

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           + M + G+  +      IL     +    +AL   +   ++G   N   ++  +  +   
Sbjct: 444 RIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRG 503

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS--ILFKIMEKGGVT 619
                A++LL   L R+ + D+ +Y  ++       K LN+    +LF  M K G+T
Sbjct: 504 SVPEKALQLLPVMLKRNVLPDVVNYSTLISCF---AKRLNSEKAVMLFIKMTKVGIT 557



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 94/194 (48%), Gaps = 2/194 (1%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           NSE A+  F  + + G+   + +T+  +I +     K++ A  +   M +  V  D+  +
Sbjct: 540 NSEKAVMLFIKMTKVGI-TFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAY 598

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             L+  +   G +  +  +FD M + G   +V +Y       L+  +   A + + KM  
Sbjct: 599 TSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKE 658

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG-ISLDVVTYNTMINGYNRFKKMD 213
            G+ P +  Y +++  F  + ++  A   F++MK  G  + +VV Y  +IN Y +  K D
Sbjct: 659 RGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRD 718

Query: 214 EAEKLFAEMKEKNI 227
           +AEKL+ EM+ K +
Sbjct: 719 QAEKLYEEMRAKGL 732


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/434 (21%), Positives = 202/434 (46%), Gaps = 10/434 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +++   + G +     +L  M ++G Q +  ++  ++  + +    ++ +  F  +K  G
Sbjct: 242 IVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG 301

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +  +Y  + KL  + G    A     +M   G+ P +  Y +++ G+        A 
Sbjct: 302 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 361

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + +EDM S G+  D+VTYN +++ + +  +MD+A  +   ++   + PT+ +YT+++ GY
Sbjct: 362 KVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGY 421

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           V       AL +FD +K+  ++P  V+Y +LL GL  A +M   + +L EM+   + P +
Sbjct: 422 VKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNE 481

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            S +  L     ++G +  A  + + M + ++  +   YG L++  CK+    RA+++  
Sbjct: 482 RS-YTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQ 540

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           ++ +        + L     +Y  M+      G+  KA    + + K G  LD + + + 
Sbjct: 541 QITD--------AGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSF 592

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I+   + G+ +   E + +M  + +  +A  Y  LI  +L   +P  A +  +     G 
Sbjct: 593 IKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGL 652

Query: 481 SPASSLFRSVMESL 494
              S+L   ++  L
Sbjct: 653 QLDSALSNCLLSGL 666



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/481 (21%), Positives = 206/481 (42%), Gaps = 14/481 (2%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  +G+Q +E +F  +I  Y   G  + +   F+  K   +      Y+++ +   + G
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                +    +M  EG +     Y  +L GF      E  + FF  +K+ G+S    TY 
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 310

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            ++  + +   M +A  +  EM +  + P  + Y  ++ GY        A +++++M S 
Sbjct: 311 CIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA 370

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLN 319
            +KP+ VTY  L+   C AG+M +   VL  +   R +P  +   +  +L    K GH+ 
Sbjct: 371 GLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIE--TYTSILDGYVKGGHIQ 428

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A +V   +    +      Y  L+    KA   + A  +LD+++   ++   +      
Sbjct: 429 KALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNER------ 482

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             SY  + +     G   KA   F+++ K+ + +D VA+  L++   K G    A E+ +
Sbjct: 483 --SYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQ 540

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            +   G+  +   Y  +++ + RKGE + A+  L  M + G    +  + S +++ F  G
Sbjct: 541 QITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSG 600

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL 558
             +  +  +  M EK ++ N      ++   L     ++A+   +    SG     DS L
Sbjct: 601 DTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASG--LQLDSAL 658

Query: 559 S 559
           S
Sbjct: 659 S 659



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/547 (21%), Positives = 229/547 (41%), Gaps = 52/547 (9%)

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           ++ Y  L     R G  + A+  F  M +  I+P  H Y  ++  +  +  +E A+   E
Sbjct: 131 LREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 190

Query: 186 DMKSRGISLDV-----------------------------------VTYNTMINGYNRFK 210
           +M S+GI L+                                    + YN+++  Y +  
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
            M+  E L A+M+E+  +  +  YTT++ G+  +   +  L  F  +K+  + P A TY 
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 310

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            ++     AG M +   +L EM +  + P +  ++  ++    + G   AA  V + M+ 
Sbjct: 311 CIVKLFTKAGNMAKALDILEEMDKHGVSP-NKMIYAMIMDGYARGGDFTAAFKVWEDMVS 369

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
             +  +   Y IL+  FCKA   D+A+ +L+ +    ++     T++    +Y  ++   
Sbjct: 370 AGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLL----PTIE----TYTSILDGY 421

Query: 391 CHNGQTGKA-EIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
              G   KA E+F R  +K   L P  V++N+L+ G +K    ++A  ++  M   GV  
Sbjct: 422 VKGGHIQKALEVFDR--IKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVP 479

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +  +Y  L E Y R G+   A      M ++  +     + +++++  + G +Q A  V 
Sbjct: 480 NERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVF 539

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEK 564
           + + + G+K N      +L+    +G + +A   +  M + G       + S +      
Sbjct: 540 QQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRS 599

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G T    + L     +   ++  +Y  ++   LAA     A S   +    G   D   S
Sbjct: 600 GDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALS 659

Query: 625 DKLIAGL 631
           + L++GL
Sbjct: 660 NCLLSGL 666



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 126/265 (47%), Gaps = 3/265 (1%)

Query: 33  AKNSEHALQFFRWVE--RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           A+  +    F  W +   AGL   D  T+  ++    + G+++ A  +L ++    +   
Sbjct: 352 ARGGDFTAAFKVWEDMVSAGL-KPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPT 410

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
            + +  +++ Y K G +Q+++++FD +K  G+   V SY++L   + +  +   A+   +
Sbjct: 411 IETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLD 470

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +ML+ G+ P   +Y  +  G+  +  +E A   F+ MK   +++D+V Y  ++    +  
Sbjct: 471 EMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSG 530

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
            M  A ++F ++ +  ++   I+Y TM+ G+        A  +  +M+      + + YT
Sbjct: 531 AMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYT 590

Query: 271 ALLPGLCDAGKMVEVQKVLREMVER 295
           + +     +G   EV + L  M E+
Sbjct: 591 SFIKACFRSGDTEEVTETLAVMREK 615



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/418 (20%), Positives = 179/418 (42%), Gaps = 15/418 (3%)

Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
           +P +  Y  ++  Y        A   F+ M++  +KPN   YT+L+    +A  M     
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187

Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
              EM+ + I   + +VF  ++     +G+  AA    +     ++      Y  +++ +
Sbjct: 188 CTEEMLSQGIQLNE-AVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAY 246

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           C+A   +    LL ++ E+      Q  L +    Y  ++          K   FF +L 
Sbjct: 247 CQAGNMETVEALLAQMEEEGF----QGNLGL----YTTVLNGFAEIRDEEKCLSFFHRLK 298

Query: 408 KKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
             G L P A  +  +++  +K GN   A +I++ M + GV  +   Y  +++ Y R G+ 
Sbjct: 299 ACG-LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDF 357

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A    + M+  G  P    +  ++ +  + GR+  A  V++++    +   ++    I
Sbjct: 358 TAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSI 417

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           L+  +  GH+++AL   D +  +G  P   +++SLLS L++  +   A  +LD  L    
Sbjct: 418 LDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGV 477

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           + +  SY  + +    AG    A+ +  ++ ++    D  +   L+    + G  ++A
Sbjct: 478 VPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRA 535



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 36/250 (14%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + AL+ F  ++ AGL      ++  ++  L +  ++ +AR +L +M   GV  +E  +  
Sbjct: 428 QKALEVFDRIKTAGL-RPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTA 486

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L E Y + G V+++  +F  MK+  +   + +Y AL K   + G    A   F ++   G
Sbjct: 487 LTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAG 546

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV------------------- 197
           ++  R TY  ML G+    +L  A    +DM+  G  LD +                   
Sbjct: 547 LKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVT 606

Query: 198 ----------------TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
                           TY T+I+G+      D+A   + + K   ++        ++ G 
Sbjct: 607 ETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGL 666

Query: 242 VAVERADDAL 251
           ++    +  L
Sbjct: 667 ISCASQNSTL 676


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 171/346 (49%), Gaps = 9/346 (2%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           H+  T   +I  L R+  ++ A  +L  M K G+Q D   F  LI     +G ++E+V++
Sbjct: 119 HNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVEL 178

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           F+ M       +  ++  L  ++ ++G    A+  F  M  +G+EP  +TYN ++ G+ L
Sbjct: 179 FNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCL 238

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
            L++  A + FE M  +G +  V +Y+ +INGY + +++DEA+ L  +M EK + P  ++
Sbjct: 239 RLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVT 298

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y T+++G        +A  +F +M S  + PN  TY+ LL GLC  G + E  K+L  M 
Sbjct: 299 YNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ 358

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           ER + P D  ++  L+     +G L  A ++   +    I      Y I+I+   K  + 
Sbjct: 359 ERKLEP-DIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLS 417

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           D A KL  K+ +   +  P S       SYN +IQ    N     A
Sbjct: 418 DEAYKLFRKMEDDGFL--PDSC------SYNVIIQGFLQNQDPSTA 455



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 206/446 (46%), Gaps = 22/446 (4%)

Query: 18  VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH--- 74
           +PQ +   V N  +     +    F+R +       + R + +++ + LG + K      
Sbjct: 50  LPQNNGGFVSNNSNDIGIDDAMASFYRMIHM-----NPRPSFVELGKFLGSIAKKKQYST 104

Query: 75  --ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
             + C  +D+   GV  ++    +LI S  +   +  +V +   M +LG++    ++  L
Sbjct: 105 VVSLCNQMDL--FGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTL 162

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              +   GR   A   FN+M      P   T+ +++        +  A   FE M  +G+
Sbjct: 163 INGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGV 222

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             ++ TYN ++NGY    +M++A K+F  M  K   P+V SY+ +I GY    R D+A  
Sbjct: 223 EPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKA 282

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +  +M   ++ PN VTY  L+ GLC A  ++E Q++ ++M    + P   +  + L G+ 
Sbjct: 283 LLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGL- 341

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
           CK GHL  A  +L +M    +  +   Y ILI+    A   + A +L  KL    I  RP
Sbjct: 342 CKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGI--RP 399

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPD 431
                    +YN MI+ L   G + +A   FR++   G L D  ++N +I+G  +  +P 
Sbjct: 400 ------SVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPS 453

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIE 457
           +A +++  M  R    D+  +  L++
Sbjct: 454 TAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 185/394 (46%), Gaps = 10/394 (2%)

Query: 100 SYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
           S  KK      V + + M   GV  +  + + L   + R      A    +KM   GI+P
Sbjct: 95  SIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQP 154

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
              T+  ++ G     +++ A+  F +M  R    + VT+  +++   +   + EA  +F
Sbjct: 155 DSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVF 214

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
             M EK +EP + +Y  ++ GY      +DA ++F+ M      P+  +Y+ L+ G C +
Sbjct: 215 ETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKS 274

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
            ++ E + +L +M E+ + P +   +  L+   C +  L  A ++ K M    +      
Sbjct: 275 RRIDEAKALLTQMSEKELIP-NTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRT 333

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y IL++  CK    + A+KLL  + E++  L P   L      YN +IQ +   G+   A
Sbjct: 334 YSILLDGLCKHGHLEEALKLLTSMQERK--LEPDIVL------YNILIQGMFIAGKLEVA 385

Query: 400 EIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           +  F +L   G+   V  +N +I+G  KEG  D A+++ + M   G   D+ +Y  +I+ 
Sbjct: 386 KELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQG 445

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           +L+  +P+ A   +D M+    S  SS F+ +++
Sbjct: 446 FLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 172/372 (46%), Gaps = 10/372 (2%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +  T +     M   G++ +  T N +IN   R   +  A  + ++M +  I+P  +++T
Sbjct: 101 QYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFT 160

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           T+I G     R  +A+ +F+EM   D  PN VT+T L+  LC  G + E + V   M E+
Sbjct: 161 TLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEK 220

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            + P +   +  L+   C    +N A+ V + M+          Y ILI  +CK+   D 
Sbjct: 221 GVEP-NIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDE 279

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           A  LL ++ EKE+I  P +       +YN ++Q LCH     +A+  F+++   G+L  +
Sbjct: 280 AKALLTQMSEKELI--PNTV------TYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNL 331

Query: 416 -AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             ++ L+ G  K G+ + A +++  M  R +  D   Y  LI+     G+   AK     
Sbjct: 332 RTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSK 391

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           +  +G  P+   +  +++ L ++G    A ++ + M + G   +      I++  L    
Sbjct: 392 LFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQD 451

Query: 535 VEEALGRIDLMM 546
              A+  ID M+
Sbjct: 452 PSTAIQLIDEMV 463



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 36/286 (12%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++++L + G ++ ARC+   M +KGV+ +   +  L+  Y  +  + ++ K+F+IM   G
Sbjct: 197 LVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKG 256

Query: 122 VERSVKSY-----------------------------------DALFKLILRRGRYMMAK 146
              SV SY                                   + L + +      + A+
Sbjct: 257 CAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQ 316

Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
             F KM S G+ P   TY+++L G      LE A++    M+ R +  D+V YN +I G 
Sbjct: 317 ELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGM 376

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
               K++ A++LF+++    I P+V +Y  MIKG +    +D+A ++F +M+     P++
Sbjct: 377 FIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDS 436

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
            +Y  ++ G           +++ EMV R     D+S F  LL ++
Sbjct: 437 CSYNVIIQGFLQNQDPSTAIQLIDEMVGRRF-SADSSTFKMLLDLE 481



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 170/396 (42%), Gaps = 15/396 (3%)

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           DDA+  F  M   + +P+ V     L  +    +   V  +  +M    +   D ++ + 
Sbjct: 68  DDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI- 126

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           L+   C+  H++ A  VL  M +L I  ++  +  LI   C       A++L +++  ++
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSK 426
            +  P +       ++  ++  LC  G   +A   F  + +KGV   +  +N L+ G+  
Sbjct: 187 AM--PNTV------TFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCL 238

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
               + A ++ +IM  +G      +Y  LI  Y +     +AK  L  M E    P +  
Sbjct: 239 RLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVT 298

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           + ++M+ L     +  A  + K M   G+  NL   + +L+ L   GH+EEAL  +  M 
Sbjct: 299 YNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ 358

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
           +    P+   ++ L+  +   GK   A +L            + +Y  ++  LL  G + 
Sbjct: 359 ERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSD 418

Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGL--NQEGNT 637
            AY +  K+ + G + D  S + +I G   NQ+ +T
Sbjct: 419 EAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPST 454



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 103/202 (50%), Gaps = 4/202 (1%)

Query: 4   RAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKM 62
           +A  T++  K   L+P    +N +   L  A +   A + F+ +  +G+  + R T+  +
Sbjct: 281 KALLTQMSEK--ELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLR-TYSIL 337

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           ++ L + G L  A  +L  M ++ ++ D  ++ +LI+     G ++ + ++F  +   G+
Sbjct: 338 LDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGI 397

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
             SV++Y+ + K +L+ G    A + F KM  +G  P   +YNV++ GF  +    TAI+
Sbjct: 398 RPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQ 457

Query: 183 FFEDMKSRGISLDVVTYNTMIN 204
             ++M  R  S D  T+  +++
Sbjct: 458 LIDEMVGRRFSADSSTFKMLLD 479


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/540 (24%), Positives = 232/540 (42%), Gaps = 42/540 (7%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
            L G    + A Q  + + R G F  D  T+ K+I  L    K+  A  +  +M   GV 
Sbjct: 262 CLCGVGKFDKAFQLIKEMMRKG-FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            D   + +LI+S+ K G+++++  +F+ M+ +G   +V +Y AL    L+  +   A   
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F++M+  G  P   TY  ++ G   +  +  A   +  +     S D   Y         
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY--------- 431

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
                     F       + P V++Y  ++ G     + D A  + D M S   +PN + 
Sbjct: 432 ----------FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           Y AL+ G C AGK+   Q+V  +M +  Y+P      +  L+    K G L+ A  VL  
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT--YTSLIDRMFKDGRLDLAMKVLSQ 539

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M++ S       Y  +I+  C+    ++A+KLL  + EK     P         +Y  +I
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC--SPNVV------TYTALI 591

Query: 388 QHLCHNGQTGKAEI---FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
             L   G+ GK ++    F Q+ +KG   + V +  LI      G  D A  ++  M + 
Sbjct: 592 DGL---GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
             P+    Y C I+ + +      +   L+ M   G  P + ++  +++   + GR++ A
Sbjct: 649 YWPKYLQGYRCAIQGFSKSF--IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706

Query: 504 SRVMKSMVE--KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
             + K M+E    VK + D+ A +++AL +   VEEA      M + G VP     + ++
Sbjct: 707 MELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLI 766



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 134/656 (20%), Positives = 272/656 (41%), Gaps = 63/656 (9%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           H A +SE  L+ F        +   + T+  ++++L   G+++    +  +M + G   D
Sbjct: 22  HAAGDSEDPLKDFG-------YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMD 74

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
                    +  K+G   +++ +        +ER     D +    +  G  +M   YF+
Sbjct: 75  RFTVGCFAHALCKEGRWADALDM--------IEREDFKLDTVLCTHMISG--LMEASYFD 124

Query: 151 KMLS-------EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           + +S           P   TY  +L GF    +L    R    M + G + +   +N+++
Sbjct: 125 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 184

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA------DDALRIFDEM 257
           + Y   K    A KL   M      P  + Y   I      E+       D A +I+ EM
Sbjct: 185 HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 244

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            + +   N V        LC  GK  +  ++++EM+ +   P D S + K++   C +  
Sbjct: 245 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP-DTSTYSKVITFLCHATK 303

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  + + M  + +  +   Y ILI++FCKA + ++A  L +++  + +   P     
Sbjct: 304 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM--RSVGCSPTVV-- 359

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
               +Y  +I       Q  +A   F +++  G   + V +  L+ G  K GN   AFE+
Sbjct: 360 ----TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 437 -VKIMG---------------RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
             K++G               R  +  +   Y  L++   +  +   A   LD+M+  G 
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P   ++ ++++   + G++ +A  V   M + G   ++     +++ +   G ++ A+ 
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            +  M++    PN   + +++  L   G++  A+KLL     + C  ++ +Y  ++D L 
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
            AGK   +  +  ++  KG   ++ +   LI  L   G   +A    R++ GEM +
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA----RLLLGEMKQ 647



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 168/357 (47%), Gaps = 18/357 (5%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  L++   K   V  + ++ D M   G E +   YDAL     + G+   A+  F +M 
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P+ HTY  ++   F   +L+ A++    M     + +VVTY  MI+G  R  + +
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A KL + M+EK   P V++YT +I G     + D +L +F +M      PN VTY  L+
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK----SGHLNAAADVLKAMI 329
             LC AG + + + +L EM + Y P         L G +C     S    A+  +L+ M 
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPK-------YLQGYRCAIQGFSKSFIASLGILEEME 679

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
                  A  YG+LI+ F KA   + A++L      KE++  P S++  +   Y  +IQ 
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMEL-----HKEMMEVP-SSVKTDNDMYASLIQA 733

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           LC   Q  +A   + ++ ++G +  ++ F  LI+G  +    D A ++   +   GV
Sbjct: 734 LCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 158/346 (45%), Gaps = 6/346 (1%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           VY  L G  +S  +  +F   +R  L   +  T+  +++ L +  K++HA  +L  M   
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTL-APNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G + +  +++ LI+ + K G +  + ++F  M + G   SV +Y +L   + + GR  +A
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            +  ++ML +   P   TY  M+ G     + E A++    M+ +G S +VVTY  +I+G
Sbjct: 534 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 593

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +  K+D +  LF +M  K   P  ++Y  +I    A    D A  +  EMK       
Sbjct: 594 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 653

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
              Y   + G   +   +    +L EM E Y       V+  L+    K+G L  A ++ 
Sbjct: 654 LQGYRCAIQGF--SKSFIASLGILEEM-ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELH 710

Query: 326 KAMIRL--SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
           K M+ +  S+ T+   Y  LI+  C A   + A +L  ++  +  +
Sbjct: 711 KEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFV 756


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/540 (24%), Positives = 232/540 (42%), Gaps = 42/540 (7%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
            L G    + A Q  + + R G F  D  T+ K+I  L    K+  A  +  +M   GV 
Sbjct: 262 CLCGVGKFDKAFQLIKEMMRKG-FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            D   + +LI+S+ K G+++++  +F+ M+ +G   +V +Y AL    L+  +   A   
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F++M+  G  P   TY  ++ G   +  +  A   +  +     S D   Y         
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY--------- 431

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
                     F       + P V++Y  ++ G     + D A  + D M S   +PN + 
Sbjct: 432 ----------FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           Y AL+ G C AGK+   Q+V  +M +  Y+P      +  L+    K G L+ A  VL  
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT--YTSLIDRMFKDGRLDLAMKVLSQ 539

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M++ S       Y  +I+  C+    ++A+KLL  + EK     P         +Y  +I
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC--SPNVV------TYTALI 591

Query: 388 QHLCHNGQTGKAEI---FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
             L   G+ GK ++    F Q+ +KG   + V +  LI      G  D A  ++  M + 
Sbjct: 592 DGL---GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
             P+    Y C I+ + +      +   L+ M   G  P + ++  +++   + GR++ A
Sbjct: 649 YWPKYLQGYRCAIQGFSKSF--IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706

Query: 504 SRVMKSMVE--KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
             + K M+E    VK + D+ A +++AL +   VEEA      M + G VP     + ++
Sbjct: 707 MELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLI 766



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 134/656 (20%), Positives = 272/656 (41%), Gaps = 63/656 (9%)

Query: 31  HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
           H A +SE  L+ F +          + T+  ++++L   G+++    +  +M + G   D
Sbjct: 22  HAAGDSEDPLKDFGY-------RPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMD 74

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
                    +  K+G   +++ +        +ER     D +    +  G  +M   YF+
Sbjct: 75  RFTVGCFAHALCKEGRWADALDM--------IEREDFKLDTVLCTHMISG--LMEASYFD 124

Query: 151 KMLS-------EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           + +S           P   TY  +L GF    +L    R    M + G + +   +N+++
Sbjct: 125 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 184

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA------DDALRIFDEM 257
           + Y   K    A KL   M      P  + Y   I      E+       D A +I+ EM
Sbjct: 185 HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 244

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            + +   N V        LC  GK  +  ++++EM+ +   P D S + K++   C +  
Sbjct: 245 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP-DTSTYSKVITFLCHATK 303

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           +  A  + + M  + +  +   Y ILI++FCKA + ++A  L +++  + +   P     
Sbjct: 304 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM--RSVGCSPTVV-- 359

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
               +Y  +I       Q  +A   F +++  G   + V +  L+ G  K GN   AFE+
Sbjct: 360 ----TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 437 -VKIMG---------------RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
             K++G               R  +  +   Y  L++   +  +   A   LD+M+  G 
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P   ++ ++++   + G++ +A  V   M + G   ++     +++ +   G ++ A+ 
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            +  M++    PN   + +++  L   G++  A+KLL     + C  ++ +Y  ++D L 
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
            AGK   +  +  ++  KG   ++ +   LI  L   G   +A    R++ GEM +
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA----RLLLGEMKQ 647



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 165/349 (47%), Gaps = 18/349 (5%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  L++   K   V  + ++ D M   G E +   YDAL     + G+   A+  F +M 
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P+ HTY  ++   F   +L+ A++    M     + +VVTY  MI+G  R  + +
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A KL + M+EK   P V++YT +I G     + D +L +F +M      PN VTY  L+
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK----SGHLNAAADVLKAMI 329
             LC AG + + + +L EM + Y P         L G +C     S    A+  +L+ M 
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPK-------YLQGYRCAIQGFSKSFIASLGILEEME 679

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
                  A  YG+LI+ F KA   + A++L      KE++  P S++  +   Y  +IQ 
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMEL-----HKEMMEVP-SSVKTDNDMYASLIQA 733

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIV 437
           LC   Q  +A   + ++ ++G +  ++ F  LI+G  +    D A ++ 
Sbjct: 734 LCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLC 782



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 158/346 (45%), Gaps = 6/346 (1%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
           VY  L G  +S  +  +F   +R  L   +  T+  +++ L +  K++HA  +L  M   
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTL-APNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G + +  +++ LI+ + K G +  + ++F  M + G   SV +Y +L   + + GR  +A
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
            +  ++ML +   P   TY  M+ G     + E A++    M+ +G S +VVTY  +I+G
Sbjct: 534 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 593

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +  K+D +  LF +M  K   P  ++Y  +I    A    D A  +  EMK       
Sbjct: 594 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 653

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
              Y   + G   +   +    +L EM E Y       V+  L+    K+G L  A ++ 
Sbjct: 654 LQGYRCAIQGF--SKSFIASLGILEEM-ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELH 710

Query: 326 KAMIRL--SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
           K M+ +  S+ T+   Y  LI+  C A   + A +L  ++  +  +
Sbjct: 711 KEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFV 756


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/515 (23%), Positives = 234/515 (45%), Gaps = 53/515 (10%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           +L+F  ++   G   H R +   ++  + ++G++  A  I+  MP+ G + D   +  LI
Sbjct: 40  SLKFLAYLVSRGYTPH-RSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI 98

Query: 99  ESYGKKG------IVQESVKI-------------------FDIMKQL-------GV---- 122
           + + + G      +V ES++                    F  MK L       GV    
Sbjct: 99  DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC 158

Query: 123 -ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +V +Y        + G   +A + F+ M  + + P   T+  ++ G+  +  LE A+
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             +++M+   +SL+VVTY  +I+G+ +  +M  AE++++ M E  +EP  + YTT+I G+
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                +D+A++   +M +  ++ +   Y  ++ GLC  GK+ E  +++ +M +  + P D
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP-D 337

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
             +F  ++    KSG + AA ++   +I      +      +I+   K      AI    
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF- 396

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
             +EK                Y  +I  LC  G   + E  F ++ + G++ D   + + 
Sbjct: 397 -CIEKA-----------NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  K+GN   AF++   M + G+  D  AY  LI     KG   +A+   D M+  G 
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           SP S++F  ++ +  ++G +  AS ++  M  +G+
Sbjct: 505 SPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/497 (23%), Positives = 222/497 (44%), Gaps = 22/497 (4%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +G       F  ++    K G V+ +  I   M + G E  V SY++L     R G    
Sbjct: 50  RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109

Query: 145 AKRYFNKM-LSEGI--EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           A      +  S G   +P   ++N +  G F  +K+   +  +  +  +  S +VVTY+T
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNG-FSKMKMLDEVFVYMGVMLKCCSPNVVTYST 168

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
            I+ + +  ++  A K F  MK   + P V+++T +I GY      + A+ ++ EM+   
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           +  N VTYTAL+ G C  G+M   +++   MVE  + P ++ V+  ++    + G  + A
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP-NSLVYTTIIDGFFQRGDSDNA 287

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
              L  M+   +  +   YG++I   C       A ++++ + + +++  P   +     
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV--PDMVI----- 340

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            +  M+     +G+   A   + +L+++G   D VA + +I G +K G    A     I 
Sbjct: 341 -FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
               V      Y  LI++  ++G+  + +     + E G  P   ++ S +  L + G +
Sbjct: 400 KANDV-----MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A ++   MV++G+  +L     ++  L  +G + EA    D M+ SG  P+   FD L
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514

Query: 558 LSVLSEKGKTIAAVKLL 574
           +    ++G   AA  LL
Sbjct: 515 IRAYEKEGNMAAASDLL 531



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/511 (22%), Positives = 215/511 (42%), Gaps = 56/511 (10%)

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           +++F   + SRG +    ++N++++   +  ++  AE +   M     EP VISY ++I 
Sbjct: 40  SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99

Query: 240 GYV------AVERADDALRI-------------------FDEMKSFD------------V 262
           G+       +     ++LR                    F +MK  D             
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCC 159

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN VTY+  +   C +G++    K    M    + P +   F  L+   CK+G L  A 
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSP-NVVTFTCLIDGYCKAGDLEVAV 218

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            + K M R+ +      Y  LI+ FCK     RA ++  ++VE  +   P S +      
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV--EPNSLV------ 270

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           Y  +I      G +  A  F  +++ +G+ LD  A+  +I G    G    A EIV+ M 
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           +  +  D   +  ++ +Y + G    A      +IE G  P      ++++ + ++G++ 
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLH 390

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLL 558
            A  ++   +EK    N  +   +++AL   G   E       + ++G VP+   + S +
Sbjct: 391 EA--IVYFCIEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
           + L ++G  + A KL    +    ++DL +Y  ++  L + G  + A  +  +++  G  
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS 505

Query: 619 TDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
            D    D LI    +EGN   A D+L  M R
Sbjct: 506 PDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 158/362 (43%), Gaps = 67/362 (18%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+ F  ++R  L + +  T   +I+   + G L  A  +  +M +  +  +   +  LI
Sbjct: 182 ALKSFHSMKRDAL-SPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + + KKG +Q + +++  M +  VE +   Y  +     +RG    A ++  KML++G+ 
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
                Y V++ G   + KL+ A    EDM+   +  D+V + TM+N Y +  +M  A  +
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360

Query: 219 FAEMKEKNIEPTVISYTTMIKG------------YVAVERADDAL--------------- 251
           + ++ E+  EP V++ +TMI G            Y  +E+A+D +               
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420

Query: 252 ---RIFDEMKSFDVKPNAVTYTALLPGLCDAGK--------------------------- 281
              R+F ++    + P+   YT+ + GLC  G                            
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480

Query: 282 --------MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
                   MVE ++V  EM+   I P D++VF  L+    K G++ AA+D+L  M R  +
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISP-DSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539

Query: 334 PT 335
            T
Sbjct: 540 VT 541



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 88/190 (46%), Gaps = 7/190 (3%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           + + +ER   F  D      MI+ + + G+L+ A  I+    +K    ++ M+ VLI++ 
Sbjct: 361 YHKLIERG--FEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEKA---NDVMYTVLIDAL 413

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
            K+G   E  ++F  + + G+      Y +    + ++G  + A +   +M+ EG+    
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDL 473

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
             Y  +++G      +  A + F++M + GIS D   ++ +I  Y +   M  A  L  +
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLD 533

Query: 222 MKEKNIEPTV 231
           M+ + +   V
Sbjct: 534 MQRRGLVTAV 543


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 213/503 (42%), Gaps = 81/503 (16%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK-QLGVERSVKSYDALFKLILRR 139
           D    G+Q     FE LI ++   G   E+V  F  M+ + G   +   Y+A+ ++++  
Sbjct: 127 DAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVAS 186

Query: 140 GRYM-MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           G  + +A   +N+M++ G  P R TYNV++ G         A++ F++M  RGI+ +V T
Sbjct: 187 GGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKT 246

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           +  +++      ++ EAE L   M++K   P  ++Y   + G     R D+A+   + ++
Sbjct: 247 HTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALR 306

Query: 259 ---SF----------------------------------DVKPNAVTYTALLPGLCDAGK 281
              +F                                  D  P+ V YT ++ G  +AG+
Sbjct: 307 RTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGR 366

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           + +      EM E+   P D   +  LL   C SG L+ A  ++  M + ++  +   + 
Sbjct: 367 IDDAFAFFDEMKEKRFTP-DTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHT 425

Query: 342 ILIENFCKAEMYDRAIKLLDKLVE--------------------------------KEII 369
           I+I   CK ++ D A+++ D +VE                                 E+ 
Sbjct: 426 IMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVG 485

Query: 370 LRPQSTLDM--------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
             P   L +        ++ S   ++  +C +GQ  KA    R +M  GV+ D V +N L
Sbjct: 486 NNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTL 545

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           + G  K  N D A  + + +  +G   D   Y  LI+S LR     DA T    ++  G 
Sbjct: 546 LNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGG 605

Query: 481 SPASSLFRSVMESLFEDGRVQTA 503
           +P+ S++ S+M SL    ++  A
Sbjct: 606 TPSLSIYNSIMRSLCRMNKLSQA 628



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 121/540 (22%), Positives = 226/540 (41%), Gaps = 63/540 (11%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLET 179
           G++    +++AL       GR+  A   F++M  E G  PT   YN +L     S  +  
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGV-- 189

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
                       + L +  YN M+                         P   +Y  ++ 
Sbjct: 190 ------------VPLALALYNRMVAA--------------------GCLPNRATYNVLMD 217

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G      A DAL++FDEM    + PN  T+T LL  +C+AG++ E + +L  M ++  PP
Sbjct: 218 GLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPP 277

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL-SIPTEAGHYGILIENFCKAEMYDRAIK 358
            D   +   L   CK+G ++ A + L+A+ R  +       Y  LI+    A  Y+   +
Sbjct: 278 -DEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQ 336

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAF 417
              +++E       Q+    +   Y  MI+     G+   A  FF ++  K+   D   +
Sbjct: 337 CYMEVLE-------QADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCY 389

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N L++     G+ D A  ++  M +  V  D + +  +I    +K    +A    D M+E
Sbjct: 390 NTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVE 449

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL--------------VA 523
            G  P    +  +++ L+   R++ A R++   +E G   +L L              + 
Sbjct: 450 VGCHPTVMTYNVLIDGLYRAHRLEEA-RMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQ 508

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
           K+++++   G V +A   +  +M SG VP+   +++LL+ L +      A++L      +
Sbjct: 509 KLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK 568

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              +D  +Y  ++D+LL A +  +A ++   I+  GG       + ++  L +     QA
Sbjct: 569 GFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQA 628



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 196/461 (42%), Gaps = 35/461 (7%)

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK-EKNIEPTVISYTTMIKGYVAV 244
           D ++ G+      +  +I  +    +  EA   F+ M+ E    PT   Y  +++  VA 
Sbjct: 127 DAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVAS 186

Query: 245 ERADD-ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP--KD 301
                 AL +++ M +    PN  TY  L+ GLC  G  V+  K+  EM++R I P  K 
Sbjct: 187 GGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKT 246

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +++   LL   C +G L  A ++L +M     P +   Y   +   CKA   D AI+ L+
Sbjct: 247 HTI---LLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLE 303

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
            L       R   T  +    Y+ +I  L   G+  +    + +++++    P  V +  
Sbjct: 304 AL-------RRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTI 356

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +IRG ++ G  D AF     M  +    D   Y  L+++    G+   A++ +  M ++ 
Sbjct: 357 MIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNN 416

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
               ++    ++  L +   V  A +V   MVE G    + +   +L   L R H  E  
Sbjct: 417 VVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTV-MTYNVLIDGLYRAHRLEEA 475

Query: 540 GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             +   M+ G+ P+                    L   LG + + D  S +K++D++  +
Sbjct: 476 RMLFYKMEVGNNPSL------------------FLRLTLGANQVKDSESLQKLVDSMCQS 517

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           G+ L AY +L  IM+ G V D  + + L+ GL +  N   A
Sbjct: 518 GQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGA 558



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 183/415 (44%), Gaps = 24/415 (5%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N++ + L     +  AL+ F  + + G+   + +TH  ++  +   G+L  A  +L  M
Sbjct: 212 YNVLMDGLCKRGTAVDALKLFDEMLQRGI-TPNVKTHTILLSSMCNAGQLKEAENLLNSM 270

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV-ERSVKSYDALFKLILRRGR 141
             KG   DE  +   +    K G V E+++  + +++ G     +K Y  L   +   GR
Sbjct: 271 EDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGR 330

Query: 142 YMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           Y    + + ++L +    P    Y +M+ G   + +++ A  FF++MK +  + D   YN
Sbjct: 331 YEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYN 390

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T++        +D A  L +EM + N+     ++T MI G    +  D+A+++FD M   
Sbjct: 391 TLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEV 450

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP------------KDNSVFMKL 308
              P  +TY  L+ GL  A ++ E + +  +M     P             KD+    KL
Sbjct: 451 GCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKL 510

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +   C+SG +  A  +L+ ++   +  +   Y  L+   CK    D A++L  +L  K  
Sbjct: 511 VDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK-- 568

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIR 422
                    ++  +Y  +I  L    +   A   F+ ++  G    ++ +N+++R
Sbjct: 569 ------GFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMR 617


>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
          Length = 693

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 146/654 (22%), Positives = 275/654 (42%), Gaps = 89/654 (13%)

Query: 5   AWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSE--HALQFFRWVERAGLFNHDRETHLKM 62
           +W+ +L+ ++R L+       V  VL      +   A +FFRW +R   + H  E    M
Sbjct: 77  SWSPKLEAQLRHLLRVLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEFAQLM 136

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           +    R GKL  A  +L  M K G   D  +  + +      G V ++++  + M+++GV
Sbjct: 137 LS-YSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGV 195

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR--------------------- 161
           E  V +Y+ L K +    R + A      ML  G  P +                     
Sbjct: 196 EPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRG 255

Query: 162 ---------------HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                           TYNV++ G       + A+ F  + + +   +D V Y+ +++ +
Sbjct: 256 LLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSF 315

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
               +M EA+++  EM  K  +P V++Y+T++ G+  +   D A ++   M   D KPN 
Sbjct: 316 CLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNT 375

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
           VT+TALL GLC  GK  E  ++L +  E +  P D +  + + G + + G L  + DV+ 
Sbjct: 376 VTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFR-REGKLKESCDVVV 434

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            M+      + G +   +E                                      N +
Sbjct: 435 QML------QKGFFPTTVE-------------------------------------INLL 451

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I  LC +G+  +A+ F  Q   KG  ++ V F  +I G S++G+ +SA  ++  M     
Sbjct: 452 IHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNR 511

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  ++++  +KG   +A   ++ M+  G  P    +R+V+    E G ++    
Sbjct: 512 HPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLN 571

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLS 562
           +++ M+ +  +E      +++E L   G + EA   +  ++++ SV +  +   L+    
Sbjct: 572 LLEKMLAR--QEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFL 629

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
            +G  + A  +      R+ I D+   +KV + L +         ++ K  E+G
Sbjct: 630 NRGLGLQAYNVACRMFRRNLIPDVKLCQKVDNQLASEKNKPVPGKLMVKFAERG 683



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 123/552 (22%), Positives = 251/552 (45%), Gaps = 19/552 (3%)

Query: 104 KGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT 163
           +G V+ + + F    +    R    +  L     R G+   A R  + M  +G  P    
Sbjct: 107 RGDVRRAFEFFRWADRQWRYRHAPEFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISI 166

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
            N+ +    ++ +++ A+ F E M+  G+  DV TYN +I G    +++ +A ++   M 
Sbjct: 167 CNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVML 226

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS-FDVKPNAVTYTALLPGLCDAGKM 282
           +    P  ISY T++      +R ++   +   M++   + P+ VTY  L+ GL   G  
Sbjct: 227 QNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHA 286

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E  + LRE   +     D   +  ++   C +G +  A +++  MI      +   Y  
Sbjct: 287 DEALEFLRESEGKRFRV-DEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYST 345

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EI 401
           +++ FC+    D+A K++  + + +   +P +       ++  ++  LC  G+T +A E+
Sbjct: 346 VVDGFCRIGELDQARKMMKHMYKNDC--KPNTV------THTALLNGLCKVGKTSEAWEL 397

Query: 402 FFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYICLIESYL 460
             +   +      + ++ ++ G  +EG    + ++V  M ++G  P   +  + LI +  
Sbjct: 398 LNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINL-LIHALC 456

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           + G+PA+AK  ++     G +     F +V+      G +++A  +M  M       ++ 
Sbjct: 457 KDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVV 516

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFC 577
               +++AL  +G ++EA G ++ M+  G +P    + +++    EKG     + LL+  
Sbjct: 517 TYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKM 576

Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
           L R  +   ++Y +V++ L A GK   AYS+L+KI+    V D ++   L+      G  
Sbjct: 577 LARQEMK--SAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLG 634

Query: 638 KQA-DILSRMIR 648
            QA ++  RM R
Sbjct: 635 LQAYNVACRMFR 646


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/592 (21%), Positives = 256/592 (43%), Gaps = 62/592 (10%)

Query: 1   MAERAWTTRLQNKIRALVP------QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFN- 53
           M   + +  L++  R  VP      QF  N  +  +H    S         V+   LFN 
Sbjct: 1   MFHSSSSMLLRSVFRVSVPKKFHPFQFPENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNC 60

Query: 54  ----HDRETHLKMIEILGRVGKLNHARCIL---LDMPKKGVQWDEDMFEVLIESYGKKGI 106
               +     ++  +ILG + K  H   +L     M  +G++ +   F +LI  + + G+
Sbjct: 61  LLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGL 120

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           +  +  +   + ++G E    + +   K    +G+   A  + +K+++ G    + +Y  
Sbjct: 121 IPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGT 180

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++ G     +   A+     +  + + LDVV Y+T+I+   + K +++A  L++EM  + 
Sbjct: 181 LINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRR 240

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           I   +++Y+ +I G+  V +  DA+ +F++M S ++ P+  T+  L+   C  G++ E +
Sbjct: 241 ISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAK 300

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
             L  M+++ I P D   +  L+   C    +N A  +L  M    +      Y I+I  
Sbjct: 301 NGLAMMMKQGIKP-DIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVING 359

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
           FCK +M D+A+KL  ++  K+I   P         +YN +I  LC               
Sbjct: 360 FCKIKMVDQAMKLFKEMHHKQIF--PN------VITYNSLIDGLC--------------- 396

Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
                              K G    A E++ +M  RG   D   Y  ++++ L K    
Sbjct: 397 -------------------KSGRISYALELIDLMHDRGQQPDIITYSSILDA-LCKNHLV 436

Query: 467 DAKTALDSMIED-GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
           D   AL   ++D G  P    +  +++ L + GR++ A  + + ++ KG    ++    +
Sbjct: 437 DKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVM 496

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           ++     G  +EAL  +  M  +  +P+   ++ ++  L +K +   A KLL
Sbjct: 497 IQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLL 548



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 222/508 (43%), Gaps = 44/508 (8%)

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           + +F  M+  G++ +  +++ L     + G    A     K+L  G EP   T N  + G
Sbjct: 90  LSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKG 149

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           F L  ++  A+ F + + + G  LD V+Y T+ING  +  +   A +L   +  K ++  
Sbjct: 150 FCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLD 209

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V+ Y+T+I      +  +DA  ++ EM S  +  N VTY+AL+ G C  GK+ +   +  
Sbjct: 210 VVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFN 269

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           +M    I P D   F  L+   CK G +  A + L  M++  I  +   Y  L++ +C  
Sbjct: 270 KMTSENINP-DVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLV 328

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
              + A  +L+ +  + +             SYN +I   C      +A   F+++  K 
Sbjct: 329 NEVNMAKSILNTMSHRGVT--------ATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ 380

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           +  + + +N+LI G  K G    A E++ +M  RG   D   Y  ++++ L K    D  
Sbjct: 381 IFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDA-LCKNHLVDKA 439

Query: 470 TALDSMIED-GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
            AL   ++D G  P    +  +++ L + GR++ A  + + ++ KG    ++    +++ 
Sbjct: 440 IALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQG 499

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
               G  +EAL                SLLS + +                  CI D  +
Sbjct: 500 FCSHGLFDEAL----------------SLLSKMKDNS----------------CIPDAIT 527

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKG 616
           YE ++ +L    +   A  +L +++ +G
Sbjct: 528 YEIIICSLFDKDENDKAEKLLREMITRG 555



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 198/444 (44%), Gaps = 46/444 (10%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
             AL F   +   G F+ D+ ++  +I  L +VG+   A  +L  +  K VQ D  M+  
Sbjct: 157 HQALNFHDKLVALG-FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYST 215

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I+S  K   V ++  ++  M    +  ++ +Y AL       G+   A   FNKM SE 
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I P  +T+N+++  F    +++ A      M  +GI  D+VTYN++++GY    +++ A+
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +   M  + +  TV SY  +I G+  ++  D A+++F EM    + PN +TY +L+ GL
Sbjct: 336 SILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C +G++    +++  M +R   P                       D++           
Sbjct: 396 CKSGRISYALELIDLMHDRGQQP-----------------------DIIT---------- 422

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  +++  CK  + D+AI LL KL ++ I  RP         +Y  +I  LC  G+ 
Sbjct: 423 ---YSSILDALCKNHLVDKAIALLIKLKDQGI--RPN------MYTYTILIDGLCKGGRL 471

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A   F  L+ KG  L    +  +I+G    G  D A  ++  M       DA  Y  +
Sbjct: 472 EDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEII 531

Query: 456 IESYLRKGEPADAKTALDSMIEDG 479
           I S   K E   A+  L  MI  G
Sbjct: 532 ICSLFDKDENDKAEKLLREMITRG 555



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/435 (21%), Positives = 183/435 (42%), Gaps = 21/435 (4%)

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A  LF  +  +N  P  + +  ++   V  +     L +F +M+   +KPN V +  L+
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
              C  G +     VL ++++    P D       +   C  G ++ A +    ++ L  
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEP-DTITLNTFIKGFCLKGQIHQALNFHDKLVALGF 171

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLL----DKLVEKEIILRPQSTLDMEASSYNPMIQH 389
             +   YG LI   CK      A++LL     KLV+ ++++            Y+ +I  
Sbjct: 172 HLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM------------YSTIIDS 219

Query: 390 LCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           +C +     A   + +++ + +  + V ++ LI G    G    A  +   M    +  D
Sbjct: 220 MCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPD 279

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              +  L++++ ++G   +AK  L  M++ G  P    + S+M+       V  A  ++ 
Sbjct: 280 VYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILN 339

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
           +M  +GV   +     ++        V++A+     M      PN   ++SL+  L + G
Sbjct: 340 TMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSG 399

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +   A++L+D    R    D+ +Y  +LDAL        A ++L K+ ++G   +  +  
Sbjct: 400 RISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYT 459

Query: 626 KLIAGLNQEGNTKQA 640
            LI GL + G  + A
Sbjct: 460 ILIDGLCKGGRLEDA 474


>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 519

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 199/391 (50%), Gaps = 13/391 (3%)

Query: 24  NLVYNVLHGAKNSEHALQ-FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            LV  VL   KN   + Q FF W +R   F+H +E++  +++ILG   +       L+++
Sbjct: 75  TLVEQVLKRCKNLGFSAQRFFLWAKRIPGFDHSKESYHILVDILGSSKQFALLWDFLIEI 134

Query: 83  -PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
              +  +    +F ++  +Y +  +  ++++ FD M + G++ ++   D L  ++ +R  
Sbjct: 135 RESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKH 194

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A++ F++ +    +    TY++++ G+    +  +A + F++M+ +  ++DV+ YN+
Sbjct: 195 AKHAQQIFDR-VKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNS 253

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++  + +  K+ EA K+F EM    I+P   +++  I+ Y        A R+ DEMK +D
Sbjct: 254 LLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYD 313

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + PN  TY  ++  LC   K+ E  ++L E++ER   P D   +  +L   C+   +N+A
Sbjct: 314 LVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQP-DAWSYNAILAYHCEHSEVNSA 372

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             ++  M++ +   +   Y +L++   +   +DRAI++ + + EK              S
Sbjct: 373 TRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFY--------PSVS 424

Query: 382 SYNPMIQHLC-HNGQTGKAEIFFRQLMKKGV 411
           +Y+ M+  LC   G+  +A  +F  ++ +G+
Sbjct: 425 TYSVMVHGLCKKKGKLEEACKYFEMMIDEGI 455



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 145/308 (47%), Gaps = 12/308 (3%)

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           AIR F+ M   G+   +   + ++    + K    A+++F  +K +  +    +Y+ +++
Sbjct: 163 AIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQ-FQTRAKTYSILVR 221

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G+  +  +  A ++FDEM+      + + Y +LL   C  GK+ E  K+ REM    I P
Sbjct: 222 GWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKP 281

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D   F   +   C++  ++ A  VL  M R  +      Y  +I+  CK E  + A +L
Sbjct: 282 -DACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQL 340

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
           L++++E+        +   +A SYN ++ + C + +   A     +++K   L D  ++N
Sbjct: 341 LNEIIER--------SGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYN 392

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL-RKGEPADAKTALDSMIE 477
            L++   + G  D A E+ + MG +G       Y  ++     +KG+  +A    + MI+
Sbjct: 393 MLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMID 452

Query: 478 DGHSPASS 485
           +G  P SS
Sbjct: 453 EGIPPYSS 460



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 130/283 (45%), Gaps = 1/283 (0%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +++ +L +     HA+ I  D  K   Q     + +L+  +G  G    + K+FD M++ 
Sbjct: 184 QLLYVLCKRKHAKHAQQIF-DRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQ 242

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
                V +Y++L +   + G+   A + F +M S GI+P   T+++ +  +  +  +  A
Sbjct: 243 QCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLA 302

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            R  ++MK   +  +V TYN MI    + +K++EA +L  E+ E++ +P   SY  ++  
Sbjct: 303 YRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAY 362

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +      + A R+   M   +  P+  +Y  LL  L   G+     +V   M E+   P 
Sbjct: 363 HCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPS 422

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
            ++  + + G+  K G L  A    + MI   IP  +    IL
Sbjct: 423 VSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEIL 465



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 141/304 (46%), Gaps = 5/304 (1%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           A RA+   ++  ++  +   D  L+Y VL   K+++HA Q F  V+    F    +T+  
Sbjct: 163 AIRAFDRMVEFGLKPTIDDLD-QLLY-VLCKRKHAKHAQQIFDRVKHQ--FQTRAKTYSI 218

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++   G +G+   A  +  +M ++    D   +  L+E++ K G V E+ K+F  M   G
Sbjct: 219 LVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNG 278

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++    ++    +         +A R  ++M    + P   TYN M+       K+E A 
Sbjct: 279 IKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAY 338

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +   ++  R    D  +YN ++  +    +++ A +L + M + N  P   SY  ++K  
Sbjct: 339 QLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLL 398

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC-DAGKMVEVQKVLREMVERYIPPK 300
           + V R D A+ +++ M      P+  TY+ ++ GLC   GK+ E  K    M++  IPP 
Sbjct: 399 IRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPY 458

Query: 301 DNSV 304
            ++V
Sbjct: 459 SSTV 462



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 136/305 (44%), Gaps = 12/305 (3%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           + ++   + +A +   AI+  D++VE    L+P  T+D      + ++  LC       A
Sbjct: 147 FWLVFRAYSRANLPSDAIRAFDRMVE--FGLKP--TID----DLDQLLYVLCKRKHAKHA 198

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
           +  F ++  +       ++ L+RG    G   SA ++   M  +    D  AY  L+E++
Sbjct: 199 QQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAF 258

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            + G+ ++A      M  +G  P +  F   + +  E   +  A RV+  M    +  N+
Sbjct: 259 CKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNV 318

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
                +++ L  +  VEEA   ++ +++    P+   ++++L+   E  +  +A +L+  
Sbjct: 319 FTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISR 378

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL-NQEG 635
            +  +C+ D  SY  +L  L+  G+   A  +   + EKG      +   ++ GL  ++G
Sbjct: 379 MVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKG 438

Query: 636 NTKQA 640
             ++A
Sbjct: 439 KLEEA 443


>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 214/435 (49%), Gaps = 21/435 (4%)

Query: 25  LVYNVLHGAKNS-EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           LV  VL    N+   AL FF+W E+   F ++ E++  +I+ LG++ + N    ++ DM 
Sbjct: 115 LVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMK 174

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +KGV   ++ F ++   Y + G V+E++  F+ M++ G++     ++ L   +++  + +
Sbjct: 175 RKGV-LTKETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVL 233

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A+  F+KM      P   +Y ++L G+     L      + +MK  G   DVVTY  +I
Sbjct: 234 SAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILI 293

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           N Y + +K D+A +LF EM+ KN +P+   + T+I G  +V R  +AL  F   K+    
Sbjct: 294 NAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFA 353

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P   TY A++   C + ++ +  +++ EM +  + P ++  +  +L    K+     A  
Sbjct: 354 PETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGP-NSRTYDIILHHLIKAEKTTEAFS 412

Query: 324 VLKAMI--RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
           V + M       PT    Y I++  FC  +  + AIK+ D++  K +       + M   
Sbjct: 413 VFEKMSSEEECEPT-VSTYDIIVRMFCNMDKVESAIKVWDRMKAKGV----HPGMHM--- 464

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIV-KI 439
            ++ +I  LCH  +   A  +F++++  G+  P A F++L +   ++G  D+   +  KI
Sbjct: 465 -FSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRKDTVVLLAQKI 523

Query: 440 MGRRGVPRDADAYIC 454
              R  P     Y+C
Sbjct: 524 DKLRKTP-----YVC 533



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 50/246 (20%), Positives = 102/246 (41%), Gaps = 5/246 (2%)

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAE-IFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAF 434
           L +E++ +N ++  L  + Q   A+ +F +  +++ V D  ++  L+ G  +E N     
Sbjct: 212 LKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLD 271

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           E+ + M   G   D   Y  LI +Y +  +  DA      M      P+  +F +++  L
Sbjct: 272 EVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGL 331

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
               R+  A    +     G          ++ A      +++A   +D M +SG  PN 
Sbjct: 332 GSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNS 391

Query: 554 --FDSLLSVLSEKGKTIAAVKLLD-FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
             +D +L  L +  KT  A  + +      +C   +++Y+ ++       K  +A  +  
Sbjct: 392 RTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWD 451

Query: 611 KIMEKG 616
           ++  KG
Sbjct: 452 RMKAKG 457


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 203/424 (47%), Gaps = 13/424 (3%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
            T +K + + G+V K  H    LL    +G Q ++  +  LI    K G  + ++K+   
Sbjct: 381 NTLIKGLCLKGQVKKALHFHDKLL---AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRK 437

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           +     + +V+ Y  +   + +      A   F++M  +GI     TY+ +++GF +  K
Sbjct: 438 IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGK 497

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           L+ AI    +M  + I+ DV TY  +++   +  K+ EA+ + A M +  ++P V +Y T
Sbjct: 498 LKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNT 557

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++ GY+ V     A  +F+ M    V P+  TYT L+ G C +  + E   + +EM ++ 
Sbjct: 558 LMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN 617

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P D   +  L+   CKSG ++   D++  M     P +   Y  LI+  CK    D+A
Sbjct: 618 MVP-DTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKA 676

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           I L +K+ ++ I  RP +       ++  ++  LC  G+   A+  F+ L+ KG  LD  
Sbjct: 677 IALFNKMKDQGI--RPNT------FTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVY 728

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N +I GH K+G  + A  ++  M   G   +A  +  +I +  +K E   A+  L  M
Sbjct: 729 IYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788

Query: 476 IEDG 479
           I  G
Sbjct: 789 IARG 792



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 224/491 (45%), Gaps = 25/491 (5%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  +++S+ K      +V +   ++  G++  + + + L       G+         K+L
Sbjct: 310 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKIL 369

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P+  T N ++ G  L  +++ A+ F + + ++G  L+ V+Y T+ING  +     
Sbjct: 370 KRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 429

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A KL  ++  +  +P V  Y+T+I      +   +A  +F EM    +  + VTY+ L+
Sbjct: 430 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 489

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  GK+ E   +L EMV + I P D   +  L+    K G +  A  VL  M++  +
Sbjct: 490 YGFCIVGKLKEAIGLLNEMVLKTINP-DVRTYTILVDALGKEGKVKEAKSVLAVMLKACV 548

Query: 334 PTEAGHYGILIENFC------KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
             +   Y  L+  +       KA+    A+ L+         + P      +  +Y  +I
Sbjct: 549 KPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG--------VTP------DVHTYTILI 594

Query: 388 QHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
              C +    +A   F+++ +K  V D V +++L+ G  K G     ++++  M  RG P
Sbjct: 595 NGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQP 654

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D   Y  LI+   + G    A    + M + G  P +  F  +++ L + GR++ A  V
Sbjct: 655 ADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEV 714

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
            + ++ KG   ++ +   ++     +G +EEAL  +  M ++G +PN   FD +++ L +
Sbjct: 715 FQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFK 774

Query: 564 KGKTIAAVKLL 574
           K +   A KLL
Sbjct: 775 KDENDKAEKLL 785



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 209/459 (45%), Gaps = 29/459 (6%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           KG+Q D     +LI  +   G +     +   + + G   S  + + L K +  +G+   
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  + +K+L++G +  + +Y  ++ G         AI+    +  R    +V  Y+T+I+
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              +++ + EA  LF+EM  K I   V++Y+T+I G+  V +  +A+ + +EM    + P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           +  TYT L+  L   GK+ E + VL  M++  + P D   +  L+        +  A  V
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP-DVFTYNTLMNGYLLVYEVKKAQHV 574

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII---LRPQSTLD---- 377
             AM  + +  +   Y ILI  FCK++M D A+ L  ++ +K ++   +   S +D    
Sbjct: 575 FNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634

Query: 378 --------------------MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
                                +  +YN +I  LC NG   KA   F ++  +G+  +   
Sbjct: 635 SGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFT 694

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           F  L+ G  K G    A E+ + +  +G   D   Y  +I  + ++G   +A T L  M 
Sbjct: 695 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           E+G  P +  F  ++ +LF+      A ++++ M+ +G+
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 130/595 (21%), Positives = 263/595 (44%), Gaps = 49/595 (8%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           +G Q ++  +  LI    + G  + ++K    +     + +V+ Y+ +   + +      
Sbjct: 92  QGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSE 151

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   F++M  +GI     TY+ +++GF +  KL+ A+     M  + I+ +V TYN +++
Sbjct: 152 AYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVD 211

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              +  K+ EA+ + A M +  ++  VI+Y+T++ GY  V     A  +F+ M    V P
Sbjct: 212 ALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 271

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           +  +Y  ++ G C   ++ +   + +EM+    PP     F K+L    K  H + A  +
Sbjct: 272 DVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ--FNKILDSFAKMKHYSTAVSL 329

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              +    I  +     ILI  FC          +L K++++     P ST+ +     N
Sbjct: 330 SHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG---YPPSTVTL-----N 381

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV-KIMGR 442
            +I+ LC  GQ  KA  F  +L+ +G  L+ V++  LI G  K G+   A +++ KI GR
Sbjct: 382 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR 441

Query: 443 ----------------------------------RGVPRDADAYICLIESYLRKGEPADA 468
                                             +G+  D   Y  LI  +   G+  +A
Sbjct: 442 LTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEA 501

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
              L+ M+    +P    +  ++++L ++G+V+ A  V+  M++  VK ++     ++  
Sbjct: 502 IGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNG 561

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
            L+   V++A    + M   G  P+   +  L++   +      A+ L      ++ + D
Sbjct: 562 YLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPD 621

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             +Y  ++D L  +G+    + ++ ++ ++G   D  + + LI GL + G+  +A
Sbjct: 622 TVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKA 676



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 183/378 (48%), Gaps = 10/378 (2%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           ++  A++  R ++   L   + E +  +I+ L +   ++ A  +  +M  KG+  D   +
Sbjct: 427 DTRGAIKLLRKID-GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 485

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             LI  +   G ++E++ + + M    +   V++Y  L   + + G+   AK     ML 
Sbjct: 486 STLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLK 545

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
             ++P   TYN ++ G+ L  +++ A   F  M   G++ DV TY  +ING+ + K +DE
Sbjct: 546 ACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDE 605

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A  LF EM +KN+ P  ++Y++++ G     R      + DEM+      + +TY +L+ 
Sbjct: 606 ALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLID 665

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           GLC  G + +   +  +M ++ I P +   F  LL   CK G L  A +V + ++     
Sbjct: 666 GLCKNGHLDKAIALFNKMKDQGIRP-NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 724

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
            +   Y ++I   CK  + + A+ +L K+ E   I  P       A +++ +I  L    
Sbjct: 725 LDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCI--PN------AVTFDIIINALFKKD 776

Query: 395 QTGKAEIFFRQLMKKGVL 412
           +  KAE   RQ++ +G+L
Sbjct: 777 ENDKAEKLLRQMIARGLL 794



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 227/515 (44%), Gaps = 16/515 (3%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G      + + L K +  +G+   A  + +K+L++G +  + +Y  ++ G         A
Sbjct: 58  GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAA 117

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           I+F   +  R    +V  YNT+I+   +++ + EA  LF+EM  K I   V++Y+T+I G
Sbjct: 118 IKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYG 177

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +  V +  +AL + + M    + PN  TY  L+  LC  GK+ E + VL  M++  +  K
Sbjct: 178 FCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACV--K 235

Query: 301 DNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            N + +  L+        +  A  V  AM  + +  +   Y I+I  FCK +  D+A+ L
Sbjct: 236 SNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNL 295

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFN 418
                 KE+IL     +      +N ++           A     +L  KG+  D    N
Sbjct: 296 F-----KEMILSRFPPI----IQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLN 346

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            LI      G     F ++  + +RG P        LI+    KG+   A    D ++  
Sbjct: 347 ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 406

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G       + +++  + + G  + A ++++ +  +  K N+++ + I++AL     V EA
Sbjct: 407 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466

Query: 539 LGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
            G    M   G    V  + +L+      GK   A+ LL+  + +    D+ +Y  ++DA
Sbjct: 467 YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA 526

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
           L   GK   A S+L  +++     D  + + L+ G
Sbjct: 527 LGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNG 561


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/519 (23%), Positives = 235/519 (45%), Gaps = 22/519 (4%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           FF+W +    F H+  T   ++E+    G    A  +  D      + D+  +  LI  +
Sbjct: 3   FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGF 62

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
            K   + ++V +   MK  G+  ++ ++ +L + +        A + F++M+   ++P  
Sbjct: 63  CKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDA 122

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
             Y V++       KL+ A  +FE M   G   D VTY  +++   +  K ++  ++F E
Sbjct: 123 FLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 182

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M  K   P +++Y T++ GY    R D AL +   +K     P+   Y+ L+ GLC   +
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
             E ++ L EM    +  +D  V+   +   CK+G L+ A  V   MI      +   Y 
Sbjct: 243 HDEARE-LFEMAAGDV--QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYN 299

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILR-PQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
           ++I + CK      A +L+D+ +E++ +   P  T+         ++  LC + +  +A 
Sbjct: 300 VIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTV---------LVDGLCKSRRVEEAC 350

Query: 401 IFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
           +   ++++ G   P  V ++ +I G  K    D A+ +++ M R G   D   Y  +I++
Sbjct: 351 VILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDA 410

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           + + G   +A+     M E G +     +  ++       +V  A  +++ M  +G++ N
Sbjct: 411 FCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPN 470

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
           +  ++ I++ L     VEEA     L+M+     NF+SL
Sbjct: 471 VVSLSTIVDGLCKESRVEEA----RLLMEK---MNFESL 502



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/505 (23%), Positives = 207/505 (40%), Gaps = 52/505 (10%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G +   +T N +L  F        A R F+D        D  TY T+I G+ + +++ +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             L  EMK   I PT++++ ++I+    +   D AL+IF +M    VKP+A  YT ++  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC   K+         MV+    P D   +  L+    K+        + + M+      
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLP-DKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSP 190

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           E   Y  ++  +CKA   D+A+ L+ +L  K     P  +L      Y+ +I  LC + +
Sbjct: 191 ELVTYATVVNGYCKAGRIDQALSLMRRL--KGTGRSPSGSL------YSTLIDGLCKHDR 242

Query: 396 TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             +A   F ++    V D + + + I G  K G  D                        
Sbjct: 243 HDEARELF-EMAAGDVQDVIVYTSFISGLCKAGKLD------------------------ 277

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
                      +AK     MIE G +P    +  ++ SL +D RV  A  +M   +E+  
Sbjct: 278 -----------EAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKC 326

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSG----SVPNFDSLLSVLSEKGKTIAAV 571
              + +   +++ L     VEEA   ++ M+++G    SV  + +++  L +  +   A 
Sbjct: 327 MPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAY 386

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
            +L       C+ D+ +Y  ++DA    G+   A  +  ++ E+G   D  + + LI G 
Sbjct: 387 VVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGY 446

Query: 632 NQEGNTKQADILSRMIRGEMSRGSQ 656
            +     +A     MI     RG Q
Sbjct: 447 CRAAKVDEA---IAMIEEMAGRGIQ 468



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 1/249 (0%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
            D   +   I  L + GKL+ A+ + + M + G   D   + V+I S  K   V E+ ++
Sbjct: 258 QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKEL 317

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE-PTRHTYNVMLWGFF 172
            D   +      V     L   + +  R   A     +ML  G   P+  TY+ ++ G  
Sbjct: 318 MDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLC 377

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
            + +L+ A    + M+  G   DVVTY  +I+ + +  ++DEA +LF  M E+     V+
Sbjct: 378 KADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVV 437

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y  +I+GY    + D+A+ + +EM    ++PN V+ + ++ GLC   ++ E + ++ +M
Sbjct: 438 AYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497

Query: 293 VERYIPPKD 301
               +P  D
Sbjct: 498 NFESLPDSD 506


>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 221/509 (43%), Gaps = 13/509 (2%)

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
           G + +S+ +F+ M +L    +  + + L  ++ + G    A   F  +L +G     H+Y
Sbjct: 167 GSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSY 226

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N +LW      +  TA+     +K  G   +  +Y  ++ G+++    +EA  +  EMK 
Sbjct: 227 NPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKI 286

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
              +P VI+YT ++K      R  DAL I  +M      P+ VTY  +L  L    + VE
Sbjct: 287 DGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVE 346

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
           + ++L+ + ++ I P D+  +  L G   K G +  A  +L  +I      +   Y I  
Sbjct: 347 IGELLQVIDQKEISP-DSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYF 405

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
              C+      A+ LL  +VEK ++  P +       SYN ++   C      +A   F 
Sbjct: 406 HCLCRENKSGEALSLLQSMVEKGLV--PTNV------SYNTILNGFCRENHIDEALQLFD 457

Query: 405 QL-MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
                    D V+FN ++    K+GN      ++  M   GV  +  +  CLI+ +   G
Sbjct: 458 HFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIG 517

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           + ++    L+SMI +G +P    F  +++ L ++G + TA R+ +     G   N     
Sbjct: 518 KISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYN 577

Query: 524 KILEALLMRGH---VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            ++ A +  G+   VE+ L  +           + S +  L ++GK   A++L D  L  
Sbjct: 578 ILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLES 637

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSIL 609
                +  Y  +L A+   GK  +  S+L
Sbjct: 638 GLTPTVTIYNTILAAMFQRGKFWDIVSLL 666



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/496 (22%), Positives = 206/496 (41%), Gaps = 11/496 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           NL+ ++L  A  +  A   FR +   G       ++  ++  L + G+   A  +L  + 
Sbjct: 192 NLLISMLSKAGMAREAHFVFRVLLGKGCLKC-AHSYNPILWALCKCGQSYTALALLYSLK 250

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K G   +   +  L+  + K+G+ +E+  + D MK  G + +V +Y  + K +   GR  
Sbjct: 251 KMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIG 310

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A     KM  EG +P   TYNV+L   F   +        + +  + IS D  TY  + 
Sbjct: 311 DALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALT 370

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            G  +  ++  A KL   +        V  Y           ++ +AL +   M    + 
Sbjct: 371 GGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLV 430

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P  V+Y  +L G C    + E  ++          P D   F  +L   CK G+ +    
Sbjct: 431 PTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSP-DVVSFNTILSAACKQGNSSMIRR 489

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           VL  M    +         LI+ FC        ++LL+ ++        ++ L+    ++
Sbjct: 490 VLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMI--------RNGLNPTVVTF 541

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N ++  LC NG  G A   FR+    G   +  ++N LI    +EGN     ++++ M  
Sbjct: 542 NMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYS 601

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
             +  DA  Y   I+   ++G+ + A    D M+E G +P  +++ +++ ++F+ G+   
Sbjct: 602 WRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWD 661

Query: 503 ASRVMKSMVEKGVKEN 518
              ++K M   G + N
Sbjct: 662 IVSLLKDMTMDGCEPN 677



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 165/419 (39%), Gaps = 49/419 (11%)

Query: 229 PTVISYTTMIKGYVAVER-----ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           P+V  Y  ++  Y+          D+ ++++  MK     PNA T+  LL G+   G + 
Sbjct: 76  PSVNDYNALLYHYLKSSSRHLIVLDELVQVYFGMKRLGPYPNASTFNILLDGMTSTGNLR 135

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGI 342
                  EM      P   S+ +K+L      G L  +  V + M+RL   PTE     +
Sbjct: 136 AAFFFAEEMWRSGFLPSFTSL-LKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPT-LNL 193

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           LI    KA M   A  +   L+ K  +          A SYNP++  LC  GQ+  A   
Sbjct: 194 LISMLSKAGMAREAHFVFRVLLGKGCL--------KCAHSYNPILWALCKCGQSYTALAL 245

Query: 403 FRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
              L K G V +  ++  L+ G SKEG  + AF ++  M   G   +   Y  +++    
Sbjct: 246 LYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCD 305

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
           +G   DA   L  M ++G  P    +  ++  LF   R      +++ + +K +  +   
Sbjct: 306 EGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFT 365

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
            A +   LL RG V                                  A KLL + +   
Sbjct: 366 YAALTGGLLKRGQVR--------------------------------VANKLLLYVISAG 393

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           C +D+A Y      L    K+  A S+L  ++EKG V    S + ++ G  +E +  +A
Sbjct: 394 CTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEA 452


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 131/548 (23%), Positives = 248/548 (45%), Gaps = 18/548 (3%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           L+    A+  +   +    VL   + + +AL F+ W      F+H   T   ++  L R 
Sbjct: 50  LERSHAAVSTKLSRDTFGGVLGRLRCTCNALGFYHWAATRPGFSHTLFTRNSLLLALVRG 109

Query: 70  GKLNHARCILLDMPKKGV-QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           G L+ A    L   +  + + +   F +L+  +  +   +    +   MK  G+  +  +
Sbjct: 110 GHLSDA----LGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGAT 165

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           +  +   +  R     A  YFN +     EPT  TY V++ G   + K+E A   FE+M 
Sbjct: 166 HGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMI 225

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +G   D++ Y+++I+G ++  ++DEA KL   M  +   PT ++YT+++ G     R  
Sbjct: 226 RKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQ 285

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
           +A++   EM+   ++P   TY+ ++ G    GK+ +   V+ EM +R   P D   +   
Sbjct: 286 EAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAP-DTISYTMF 344

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           +      G    A  V + M+      +   YGI+I+NFCK      A  +L +L++K  
Sbjct: 345 IEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVL-RLMDKAA 403

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
           + +P   +      Y  ++     + +  +A   +++++K G+L   V +N +I    K 
Sbjct: 404 V-KPNRYI------YTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKL 456

Query: 428 GNPDSAFEIVKIMGRRGVPRDAD--AYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
              D A E+++ M RR    +     Y  +I    + G    A   L  MI++G  P   
Sbjct: 457 KKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCF 516

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
            + S++++L   G+V  A  +++ M++ G+  + D     L  +L R  V+ A   +  M
Sbjct: 517 TYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPD-DHTYGTLVQILCRSDVDAAWDLLQEM 575

Query: 546 MQSGSVPN 553
           M++G  PN
Sbjct: 576 MRNGHTPN 583



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 115/534 (21%), Positives = 213/534 (39%), Gaps = 88/534 (16%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G   T  T N +L        L  A+ FF+   S     +V ++N ++ G+      +  
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEP---NVSSFNILLRGFAARDDFEVV 147

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             L  EMK + I     ++  ++    A    D A+  F+ +     +P   TYT L+ G
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDG 207

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC A K           VER                         A DV + MIR     
Sbjct: 208 LCKAHK-----------VER-------------------------ACDVFEEMIRKGYKP 231

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   Y  LI+   KA   D A KL+D +V +     P  T    A +Y  ++  LC  G+
Sbjct: 232 DIIAYSSLIDGLSKAGRVDEARKLVDLMVARG----PPPT----AVAYTSIVAGLCKCGR 283

Query: 396 TGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A    +++ ++ +   V  ++ ++ G+   G  + AF +++ M  R    D  +Y  
Sbjct: 284 IQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTM 343

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
            IE+    G   +A+   ++M+E G  P    +  ++++  ++G +  A+ V++ M +  
Sbjct: 344 FIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAA 403

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           VK N  +   I++  +    +EEAL     +++ G +P+   ++++++ L +  K   A+
Sbjct: 404 VKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEAL 463

Query: 572 KLLD--------------------FCLGR-----------------DCIIDLASYEKVLD 594
           +LL                       LG+                   I D  +Y  ++ 
Sbjct: 464 ELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQ 523

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
            L  AGK   A  +L ++++ G   D  +   L+  L +       D+L  M+R
Sbjct: 524 TLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDAAWDLLQEMMR 577


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 144/600 (24%), Positives = 256/600 (42%), Gaps = 85/600 (14%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A++ F  +  A + + D+  +   I  L ++G    A  +L +M + G    +  +  
Sbjct: 209 EDAVRLFDEMPGAEI-DPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRT 267

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +++   K G ++E++++ D M+  G +  V     L +    R     A   F + L +G
Sbjct: 268 MVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDG 327

Query: 157 IEPTRHTYNVMLWG--------------------------FFLSLKL---------ETAI 181
           I PT+  Y V++ G                          F LSL L         + A+
Sbjct: 328 IVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAV 387

Query: 182 RFFEDMKSRGISLDVVTYNTMI-------------NGYNRFKK----------------- 211
             FE+M   G+  DV TYN +I             N ++R KK                 
Sbjct: 388 CLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGY 446

Query: 212 -----MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
                MDEA KL++EM  +  +P V++Y T+++GY+A +  D+A  + DEMK   V  N 
Sbjct: 447 CKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCND 506

Query: 267 VTYTALLPGLCDAGKMVEVQKVLRE-MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            TY  L+ G+C   ++ EV  +L+  M E +IP      +  ++    K+G + +A  V 
Sbjct: 507 YTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTM--MTYNSIINGFVKAGMMGSAFTVY 564

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
           + M    +P     Y   I+ +C+    D A+K+L+ +  +   L+P      +  +YN 
Sbjct: 565 QQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG--LQP------DIVAYNA 616

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I   C  G    A      L+K G+  + V +N+LI G+          +  + M + G
Sbjct: 617 LINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +  D   Y  LI+ + + G  A A      M+  G+ P +  F ++   L   G +  A 
Sbjct: 677 IVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAK 736

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEK 564
           ++++ M    V+ N+ +   ++   L    ++EA    D M+  G  P+ D+   +L  K
Sbjct: 737 KLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPD-DTTYDILVSK 795



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 221/473 (46%), Gaps = 20/473 (4%)

Query: 1   MAERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
           M ++A+    Q   + L+P  F+ +LV   L   +  + A+  F  +  +GL   D  T+
Sbjct: 347 MTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL--PDVFTY 404

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             +I    +  KL  A  +   M K GV+   + +  L+  Y KKG + E+VK++  M  
Sbjct: 405 NNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPM 464

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G + +V +Y  L +  + +  +  A    ++M   G+    +TYNV++ G  +  ++  
Sbjct: 465 EGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCE 524

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
                +   S G    ++TYN++ING+ +   M  A  ++ +M+EK + P +I+YT+ I 
Sbjct: 525 VDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFID 584

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY     +D AL++ ++++   ++P+ V Y AL+ G C  G M    ++L  +++  + P
Sbjct: 585 GYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAP 644

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLK---AMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
             N+V    L    K  +LN   +V K   +MI+  I  +   Y  LI+ F K      A
Sbjct: 645 --NTVVYNSLITGYK--NLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFA 700

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV- 415
           ++L  +++ K  I         +A ++  +   LC +G    A+    ++ +  V   V 
Sbjct: 701 LELYSEMMAKGYI--------PDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVF 752

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI-ESYLRKGEPAD 467
            +N LI G+ ++     AF +   M   G+  D   Y  L+ + +L     AD
Sbjct: 753 IYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLEADNCAD 805



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 137/630 (21%), Positives = 261/630 (41%), Gaps = 86/630 (13%)

Query: 75  ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
           A  + ++M  +G + D  MF+ L+ +  K+G+ +++V++FD M    ++   + Y     
Sbjct: 176 ALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAIT 235

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
            + + G    A R   +M   G +    TY  M+     + ++E A+R  ++M+  G  +
Sbjct: 236 ALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKM 295

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV---------- 244
           DV+   T++ GY   +++  A  LF E  +  I PT + Y  +I+G   V          
Sbjct: 296 DVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELC 355

Query: 245 -------------------------ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
                                     R  DA+ +F+EM    + P+  TY  L+   C A
Sbjct: 356 RQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQA 414

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
            K+ E   +   M +  + P  N+    L+G  CK G ++ A  +   M           
Sbjct: 415 HKLREALNLFDRMKKAGVKPSINTYNSLLMG-YCKKGCMDEAVKLYSEMPMEGFKPNVVT 473

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC-------- 391
           Y  L+  +   + +D A  LLD++         Q+ +     +YN +I  +C        
Sbjct: 474 YITLMRGYIAKKDFDNAYALLDEM--------KQNGVSCNDYTYNVLINGICMVDRVCEV 525

Query: 392 ------------------HN---------GQTGKAEIFFRQLMKKGVLDP--VAFNNLIR 422
                             +N         G  G A   ++Q+ +KG L P  + + + I 
Sbjct: 526 DGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG-LPPNIITYTSFID 584

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G+ + G  D A +++  + RRG+  D  AY  LI  + ++G  + A   L  +++DG +P
Sbjct: 585 GYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAP 644

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            + ++ S++        ++  S+  +SM++ G+  +      +++     G+V  AL   
Sbjct: 645 NTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELY 704

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             MM  G +P+   F +L   L   G    A KLL+     D   ++  Y  +++  L  
Sbjct: 705 SEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRD 764

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
            K   A+ +  +++  G   D  + D L++
Sbjct: 765 CKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 126/581 (21%), Positives = 236/581 (40%), Gaps = 75/581 (12%)

Query: 104 KGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHT 163
           +G+V +     D++ +     S K   ALF  +  RG Y +    F+ ++S  ++   H 
Sbjct: 151 RGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRG-YRVDAWMFDALMSACLKEGMH- 208

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
                         E A+R F++M    I  D   Y   I    +      A ++  EMK
Sbjct: 209 --------------EDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMK 254

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           E   +    +Y TM+   V   R ++ALR+ DEM+    K + +  T L+ G C   ++ 
Sbjct: 255 EVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVG 314

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQC-KSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
               + +E ++  I P    V   +L   C + G    A ++ + M    +        +
Sbjct: 315 NALNLFKETLKDGIVP--TKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSL 372

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           +++       +  A+ L +++ +  +          +  +YN +I   C   +  +A   
Sbjct: 373 VLKGLLNDRRWKDAVCLFEEMADSGLP---------DVFTYNNLIHWHCQAHKLREALNL 423

Query: 403 FRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           F ++ K GV   +  +N+L+ G+ K+G  D A ++   M   G   +   YI L+  Y+ 
Sbjct: 424 FDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIA 483

Query: 462 KGEPADAKTALDSMIEDGHS-----------------------------------PASSL 486
           K +  +A   LD M ++G S                                   P    
Sbjct: 484 KKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMT 543

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           + S++    + G + +A  V + M EKG+  N+      ++     G  + AL  ++ + 
Sbjct: 544 YNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVR 603

Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
           + G  P+   +++L++   ++G    A++LL   L +D    LA    V ++L+   K L
Sbjct: 604 RRGLQPDIVAYNALINGFCQEGNMSHALQLLVILL-KD---GLAPNTVVYNSLITGYKNL 659

Query: 604 NA---YSILFKIMEKGG-VTDWKSSDKLIAGLNQEGNTKQA 640
           N     S  ++ M KGG V D  +   LI G +++GN   A
Sbjct: 660 NMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFA 700



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 96/483 (19%), Positives = 193/483 (39%), Gaps = 52/483 (10%)

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A   +A M  + + P + S T ++        A DAL +F EM+    + +A  + AL+ 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
                G   +  ++  EM    I P D  V+   +   CK G    A  +L+ M  +   
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDP-DQRVYALAITALCKLGDGGRALRMLREMKEVGFD 259

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
           T    Y  +++   K    + A+++ D++ +        +   M+      +++  C   
Sbjct: 260 TCDFTYRTMVDVLVKTGRMEEALRVNDEMRD--------AGKKMDVIVATTLMRGYCLRQ 311

Query: 395 QTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRG-VP------ 446
           + G A   F++ +K G++   V +  LIRG  + G    A+E+ + M  +G +P      
Sbjct: 312 EVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELS 371

Query: 447 ----------RDADAYICLIESYLRKGEP------------------ADAKTALDSMIED 478
                     R  DA +CL E     G P                   +A    D M + 
Sbjct: 372 LVLKGLLNDRRWKDA-VCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKA 430

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P+ + + S++    + G +  A ++   M  +G K N+     ++   + +   + A
Sbjct: 431 GVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNA 490

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
              +D M Q+G   N   ++ L++ +    +      +L   +    I  + +Y  +++ 
Sbjct: 491 YALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIING 550

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGS 655
            + AG   +A+++  ++ EKG   +  +    I G  + G +   D+  +M+     RG 
Sbjct: 551 FVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCS---DMALKMLNDVRRRGL 607

Query: 656 QKE 658
           Q +
Sbjct: 608 QPD 610


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 229/500 (45%), Gaps = 17/500 (3%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK----SRGISLDVVTYNTMINGYNRFKK 211
           G  P   ++N +L  F  + +   A  FF  +      R I+ ++ TYN M+        
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           +D A  LF  ++ + + P  I+Y+T++ G+V   R D+AL + DEM S++V+P+AV Y A
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           LL G    G+  +  +V  ++V       + + +  +L   CK G    A DV + M+  
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
           +   +   YG +I   C++   D A ++  ++++  ++  P   +      YN +++  C
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLV--PDVVI------YNSLLKGFC 346

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-RGVPRDAD 450
           H G+ G+A  F+  +   G+ +  ++N +++G    G  D A ++ +++ +   +  D  
Sbjct: 347 HAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMV 406

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +  +I     KG    +   L+     G       + S++  L +DGR+  A ++ + +
Sbjct: 407 TFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKI 466

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKT 567
                K N  +   ++          +A+     M ++   P    +++L+  L +  K 
Sbjct: 467 SMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKY 526

Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
           + A +     L + C++D+ +Y  ++  L    K   A ++  +I++KG  TD    + L
Sbjct: 527 LEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNIL 586

Query: 628 IAGLNQEGNTKQAD-ILSRM 646
           I GL   G   +A  +LS M
Sbjct: 587 IHGLCSAGKVDEASQLLSEM 606



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/544 (22%), Positives = 253/544 (46%), Gaps = 16/544 (2%)

Query: 15  RALVPQFD-HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R + P    +N++   L    + + A+  F  +   GL   DR T+  ++    +  +L+
Sbjct: 153 RRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGL-APDRITYSTLMSGFVKNNRLD 211

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD-IMKQLGVERSVKSYDAL 132
           +A  +L +MP   VQ D   +  L+    + G  ++++++++ +++  G   ++ +Y+ +
Sbjct: 212 NALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVM 271

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
              + + G +  A   + +M++   +P   TY  M+ G   S  +++A R + +M   G+
Sbjct: 272 LDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGL 331

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             DVV YN+++ G+    ++ EA K +  M    I   V SY  M+KG       D A  
Sbjct: 332 VPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATD 390

Query: 253 IFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           +++ ++  D + P+ VT++ ++ GLC+ G   +  ++L E         D   +  ++  
Sbjct: 391 LWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEE-ARTSGKELDEFSYSSMISG 449

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK G L+ A  + + +   S    +  Y  LI  FC+A  +  AI++  ++ E +    
Sbjct: 450 LCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDC--S 507

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP 430
           P +       +YN +I  LC   +  +A  F R++++KG +LD   + +LIRG  ++   
Sbjct: 508 PTTI------TYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKI 561

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH-SPASSLFRS 489
           D A  +   +  +G+  D   +  LI      G+  +A   L  M E  +  P    + +
Sbjct: 562 DGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNT 621

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           +M+  +E G    A+ +  +++E G+  ++      ++ L       E +  ++ M+ SG
Sbjct: 622 LMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASG 681

Query: 550 SVPN 553
            +P 
Sbjct: 682 IIPT 685



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 185/414 (44%), Gaps = 34/414 (8%)

Query: 47  ERAGLFNH--DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKK 104
           ER    NH  D  T+  MI  L R   ++ A  +  +M K G+  D  ++  L++ +   
Sbjct: 289 ERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHA 348

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM-LSEGIEPTRHT 163
           G V E+ K +D M   G+ R+V SY+ + K +   G    A   +  +   + + P   T
Sbjct: 349 GRVGEAWKFWDSMSVSGI-RNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVT 407

Query: 164 YNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
           ++ M+ G         +++  E+ ++ G  LD  +Y++MI+G  +  ++D+A KL+ ++ 
Sbjct: 408 FSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKIS 467

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
             + +P    Y  +I G+    +  DA+R++ +M   D  P  +TY  L+ GLC A K +
Sbjct: 468 MDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYL 527

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E  +  REM+E+     D + +  L+   C+   ++ A  +   ++   + T+   + IL
Sbjct: 528 EASRFTREMLEKGCM-LDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNIL 586

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQST-------------LDMEAS--------- 381
           I   C A   D A +LL ++ EK        T              D  AS         
Sbjct: 587 IHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENG 646

Query: 382 ------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
                 SYN  I+ LC   +T +      +++  G++   + +N L+R   K G
Sbjct: 647 LVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 154/344 (44%), Gaps = 5/344 (1%)

Query: 2   AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           A + W +   + IR +     +N++   L      + A   +  +E+    + D  T   
Sbjct: 354 AWKFWDSMSVSGIRNVT---SYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFST 410

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI  L   G  N +  IL +    G + DE  +  +I    K G + ++VK+++ +    
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + +   Y+AL     +  ++  A R +++M      PT  TYN ++ G   + K   A 
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEAS 530

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           RF  +M  +G  LDV TY ++I G  R KK+D A  L+ ++ +K ++  V+ +  +I G 
Sbjct: 531 RFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGL 590

Query: 242 VAVERADDALRIFDEMKS-FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
            +  + D+A ++  EMK   +  PN VTY  L+ G  + G   +   +   ++E  + P 
Sbjct: 591 CSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPD 650

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
             S   ++ G+ C          +L  M+   I   A  + IL+
Sbjct: 651 IISYNTRIKGL-CSCNRTPEGVQLLNEMLASGIIPTAITWNILV 693


>gi|224099199|ref|XP_002311400.1| predicted protein [Populus trichocarpa]
 gi|222851220|gb|EEE88767.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 231/499 (46%), Gaps = 15/499 (3%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           D+   G + DED+  VLI S+G+ G+ +   +IF  +  LG+  S + Y+A+   +++  
Sbjct: 9   DIRNSGFRVDEDLLCVLIGSWGRLGLAKYCEEIFGQISFLGITPSTRLYNAVIDALVKSN 68

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
              +A   F +M ++  +P R TYN+++ G      ++ A+R  + M+  G S +V TY 
Sbjct: 69  SLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVDEALRLVKQMEGFGYSANVYTYT 128

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I G+   K++DEA ++F  MK +N+ P   +  +++ G        +A  +  +    
Sbjct: 129 NLIYGFCNAKRVDEAFRVFETMKLRNVNPNEATIRSLVHGVFRCVAPREAFELVIDFIEK 188

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-YIPPKDNSVFMKLLGVQCKSGHLN 319
           +     +    LL  L +     E   +LR++ ER Y+P  D+S F   +    K   +N
Sbjct: 189 EPVLGRLACDTLLCCLSEKCMPREAGALLRKLGERGYLP--DSSTFNITMTCLLKGLDVN 246

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
               +L   I          Y  LIE   KA       + L+++V+  ++         +
Sbjct: 247 ETCGILDKFIARGAKLGFSFYLALIETLYKAGRGMEGDRYLNQMVKDRLV--------SD 298

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             SYN +I   C      KA + F+ +  +GV  + V FN LI GH K+G    A E+++
Sbjct: 299 VFSYNMLIDCFCKANVMNKAVMVFKVMQDRGVSPNLVTFNTLISGHCKDGEVHKARELLQ 358

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
           ++   G+  D   +  +I+   R  +  DA      M+E G SP +  +  ++ SL   G
Sbjct: 359 MLLELGLKPDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWGISPNAVTYNILIRSLCLIG 418

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
            V  + +++K M + G+  ++     ++++    G VE+A      M   G +PN   + 
Sbjct: 419 DVGRSMKLLKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGLIPNNYTYG 478

Query: 556 SLLSVLSEKGKTIAAVKLL 574
           +L+  L E G+   A K+ 
Sbjct: 479 ALVKALFELGRCDEAKKMF 497



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 1/287 (0%)

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +L  + ++G   D   F + +    K   V E+  I D     G +     Y AL 
Sbjct: 212 EAGALLRKLGERGYLPDSSTFNITMTCLLKGLDVNETCGILDKFIARGAKLGFSFYLALI 271

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           + + + GR M   RY N+M+ + +     +YN+++  F  +  +  A+  F+ M+ RG+S
Sbjct: 272 ETLYKAGRGMEGDRYLNQMVKDRLVSDVFSYNMLIDCFCKANVMNKAVMVFKVMQDRGVS 331

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            ++VT+NT+I+G+ +  ++ +A +L   + E  ++P + +++++I      ++ DDAL  
Sbjct: 332 PNLVTFNTLISGHCKDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQFDDALGC 391

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F EM  + + PNAVTY  L+  LC  G +    K+L++M +  I P D   F  L+   C
Sbjct: 392 FSEMVEWGISPNAVTYNILIRSLCLIGDVGRSMKLLKDMRKDGISP-DIFSFNALIQSFC 450

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           + G +  A  +  +M  L +      YG L++   +    D A K+ 
Sbjct: 451 RMGKVEKAEKMFVSMSTLGLIPNNYTYGALVKALFELGRCDEAKKMF 497



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 106/490 (21%), Positives = 198/490 (40%), Gaps = 45/490 (9%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +   L+ A      M     + D   + +LI    K G+V E++++   M+  G
Sbjct: 60  VIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVDEALRLVKQMEGFG 119

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +V +Y  L        R   A R F  M    + P   T   ++ G F  +    A 
Sbjct: 120 YSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVNPNEATIRSLVHGVFRCVAPREAF 179

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV----ISYTTM 237
               D   +   L  +  +T++   +      EA  L  ++ E+   P      I+ T +
Sbjct: 180 ELVIDFIEKEPVLGRLACDTLLCCLSEKCMPREAGALLRKLGERGYLPDSSTFNITMTCL 239

Query: 238 IKG------------------------YVAV-------ERADDALRIFDEMKSFDVKPNA 266
           +KG                        Y+A+        R  +  R  ++M    +  + 
Sbjct: 240 LKGLDVNETCGILDKFIARGAKLGFSFYLALIETLYKAGRGMEGDRYLNQMVKDRLVSDV 299

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
            +Y  L+   C A  M +   V + M +R + P +   F  L+   CK G ++ A ++L+
Sbjct: 300 FSYNMLIDCFCKANVMNKAVMVFKVMQDRGVSP-NLVTFNTLISGHCKDGEVHKARELLQ 358

Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
            ++ L +  +   +  +I+  C+A+ +D A+    ++VE  I   P       A +YN +
Sbjct: 359 MLLELGLKPDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWGI--SPN------AVTYNIL 410

Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
           I+ LC  G  G++    + + K G+  D  +FN LI+   + G  + A ++   M   G+
Sbjct: 411 IRSLCLIGDVGRSMKLLKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGL 470

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             +   Y  L+++    G   +AK    SM  +G  P S     + E+LF+ G  +    
Sbjct: 471 IPNNYTYGALVKALFELGRCDEAKKMFFSMEVNGCVPDSFTCNLISENLFKQGDFEELQN 530

Query: 506 VMKSMVEKGV 515
           + K   E+G+
Sbjct: 531 IAKICSERGI 540



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 119/239 (49%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   +   +N A  +   M  +GV  +   F  LI  + K G V ++ ++  ++ +LG
Sbjct: 305 LIDCFCKANVMNKAVMVFKVMQDRGVSPNLVTFNTLISGHCKDGEVHKARELLQMLLELG 364

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++  + ++ ++   + R  ++  A   F++M+  GI P   TYN+++    L   +  ++
Sbjct: 365 LKPDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWGISPNAVTYNILIRSLCLIGDVGRSM 424

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +  +DM+  GIS D+ ++N +I  + R  K+++AEK+F  M    + P   +Y  ++K  
Sbjct: 425 KLLKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGLIPNNYTYGALVKAL 484

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
             + R D+A ++F  M+     P++ T   +   L   G   E+Q + +   ER I  K
Sbjct: 485 FELGRCDEAKKMFFSMEVNGCVPDSFTCNLISENLFKQGDFEELQNIAKICSERGIALK 543



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 115/234 (49%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +L +IE L + G+       L  M K  +  D   + +LI+ + K  ++ ++V +F +M+
Sbjct: 267 YLALIETLYKAGRGMEGDRYLNQMVKDRLVSDVFSYNMLIDCFCKANVMNKAVMVFKVMQ 326

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
             GV  ++ +++ L     + G    A+     +L  G++P   T++ ++     + + +
Sbjct: 327 DRGVSPNLVTFNTLISGHCKDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQFD 386

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+  F +M   GIS + VTYN +I        +  + KL  +M++  I P + S+  +I
Sbjct: 387 DALGCFSEMVEWGISPNAVTYNILIRSLCLIGDVGRSMKLLKDMRKDGISPDIFSFNALI 446

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           + +  + + + A ++F  M +  + PN  TY AL+  L + G+  E +K+   M
Sbjct: 447 QSFCRMGKVEKAEKMFVSMSTLGLIPNNYTYGALVKALFELGRCDEAKKMFFSM 500



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 1/174 (0%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F  + + + L  A+  + AL  F  +   G+ + +  T+  +I  L  +G +  +  +L 
Sbjct: 370 FTFSSIIDCLCRAQQFDDALGCFSEMVEWGI-SPNAVTYNILIRSLCLIGDVGRSMKLLK 428

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           DM K G+  D   F  LI+S+ + G V+++ K+F  M  LG+  +  +Y AL K +   G
Sbjct: 429 DMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGLIPNNYTYGALVKALFELG 488

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
           R   AK+ F  M   G  P   T N++    F     E      +    RGI+L
Sbjct: 489 RCDEAKKMFFSMEVNGCVPDSFTCNLISENLFKQGDFEELQNIAKICSERGIAL 542



 Score = 40.4 bits (93), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 98/268 (36%), Gaps = 34/268 (12%)

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
           YN +I  L  +     A + F+Q+       D   +N LI G  K G  D A  +VK M 
Sbjct: 57  YNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVDEALRLVKQME 116

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
             G   +   Y  LI  +       +A    ++M     +P  +  RS++  +F     +
Sbjct: 117 GFGYSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVNPNEATIRSLVHGVFRCVAPR 176

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
            A  ++   +EK                      E  LGR+            D+LL  L
Sbjct: 177 EAFELVIDFIEK----------------------EPVLGRLAC----------DTLLCCL 204

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
           SEK     A  LL     R  + D +++   +  LL          IL K + +G    +
Sbjct: 205 SEKCMPREAGALLRKLGERGYLPDSSTFNITMTCLLKGLDVNETCGILDKFIARGAKLGF 264

Query: 622 KSSDKLIAGLNQEGNTKQAD-ILSRMIR 648
                LI  L + G   + D  L++M++
Sbjct: 265 SFYLALIETLYKAGRGMEGDRYLNQMVK 292


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 193/402 (48%), Gaps = 18/402 (4%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLK----MIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           E ALQ + W+ + G   H R    K    MI  LGR+GK+  A  +     K G   +  
Sbjct: 179 ERALQGYEWMVQQG---HLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVY 235

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM-MAKRYFNK 151
            +  ++ +YG+ G  +E++K+F  MK+ G + ++ +Y+ +     + G  +  A   F +
Sbjct: 236 AYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEE 295

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M  EG+EP R T+N ++         E + R F +M+ RGI  D+ TYNT+I+   +  +
Sbjct: 296 MQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQ 355

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           M+ A  + + M+ KNI P V++Y+TMI GY  +   ++A+ ++ +MK   V+P+ V+Y  
Sbjct: 356 MELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNT 415

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           L+      G+  +     ++M ER     D   +  L+    K G    AA +   M   
Sbjct: 416 LIDIYAKLGRFDDALTACKDM-ERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAE 474

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            +      Y  LI+ + KA M+  A  +  +   K   L+P   L      Y+ +I   C
Sbjct: 475 GLVPNVLTYSALIDAYSKAGMHQDATSIFVEF--KRAGLKPDVVL------YSSLIDSCC 526

Query: 392 HNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
             G    A +  +++ + G+  + V +N+LI  + + G  D+
Sbjct: 527 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDN 568



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 183/399 (45%), Gaps = 55/399 (13%)

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           K+E A+  F   +  G   +V  Y+ M++ Y R  +  EA K+F  MK+   +P +I+Y 
Sbjct: 214 KVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYN 273

Query: 236 TMI----KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE-VQKVLR 290
           T+I    KG V +++A D   IF+EM+   V+P+ +T+ +L+  +C  G + E  Q+V  
Sbjct: 274 TIIDACGKGGVDLKKALD---IFEEMQKEGVEPDRITFNSLIA-VCSRGSLWEDSQRVFA 329

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           EM  R I  +D   +  L+   CK G +  AA ++ +M   +I      Y  +I+ + K 
Sbjct: 330 EMQRRGI-EQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKL 388

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
             ++ AI L                 DM+ S   P                         
Sbjct: 389 GCFEEAIGLYH---------------DMKESGVRP------------------------- 408

Query: 411 VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             D V++N LI  ++K G  D A    K M R G+  D   Y  LI++Y ++G+  DA  
Sbjct: 409 --DRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAG 466

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
             D M  +G  P    + +++++  + G  Q A+ +       G+K ++ L + ++++  
Sbjct: 467 LFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCC 526

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
             G VE+A+  +  M Q+G  PN   ++SL+      G+
Sbjct: 527 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQ 565



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 126/250 (50%), Gaps = 1/250 (0%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E + + F  ++R G+   D  T+  +I+ + + G++  A  I+  M  K +  +   +  
Sbjct: 322 EDSQRVFAEMQRRGI-EQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYST 380

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I+ YGK G  +E++ ++  MK+ GV     SY+ L  +  + GR+  A      M   G
Sbjct: 381 MIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG 440

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           ++    TYN ++  +    K + A   F+ MK+ G+  +V+TY+ +I+ Y++     +A 
Sbjct: 441 LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDAT 500

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +F E K   ++P V+ Y+++I         +DA+ +  EM    ++PN VTY +L+   
Sbjct: 501 SIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 560

Query: 277 CDAGKMVEVQ 286
              G++  V+
Sbjct: 561 GRNGQVDNVE 570



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/325 (21%), Positives = 139/325 (42%), Gaps = 45/325 (13%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           DR ++  +I+I  ++G+ + A     DM + G++ D   +  LI++YGK+G  +++  +F
Sbjct: 409 DRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLF 468

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D MK  G+  +V +Y AL     + G +  A   F +    G++P    Y+ ++      
Sbjct: 469 DKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKC 528

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE------------------ 216
             +E A+   ++M   GI  ++VTYN++I+ Y R  ++D  E                  
Sbjct: 529 GLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRS 588

Query: 217 ------------------------KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
                                    +F EM++  ++P V++++ ++          +A  
Sbjct: 589 TEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASV 648

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           + ++M+ FD     + +  LL GL +    VE Q++  E + R       + +  L  V 
Sbjct: 649 LLEQMRFFDSWVYGIAH-GLLMGLREH-VWVEAQRLFDE-IARMDYATGAAFYNALTDVL 705

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEA 337
              G    A +V+ A  R  +   A
Sbjct: 706 WHFGQRQGAQEVVVAAKRRQVWENA 730



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/319 (21%), Positives = 133/319 (41%), Gaps = 16/319 (5%)

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           S+ +  LG   + G +  A DV     +         Y  ++  + ++     A+K+   
Sbjct: 203 SIMISTLG---RLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQA 259

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNG-QTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           +  K+   +P         +YN +I      G    KA   F ++ K+GV  D + FN+L
Sbjct: 260 M--KKAGCKPNLI------TYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSL 311

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I   S+    + +  +   M RRG+ +D   Y  LI++  + G+   A + + SM     
Sbjct: 312 IAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNI 371

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           SP    + ++++   + G  + A  +   M E GV+ +      +++     G  ++AL 
Sbjct: 372 SPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALT 431

Query: 541 RIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
               M + G    V  +++L+    ++GK   A  L D       + ++ +Y  ++DA  
Sbjct: 432 ACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYS 491

Query: 598 AAGKTLNAYSILFKIMEKG 616
            AG   +A SI  +    G
Sbjct: 492 KAGMHQDATSIFVEFKRAG 510


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/563 (22%), Positives = 242/563 (42%), Gaps = 14/563 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M ++G+  DE  +  L+  + +   ++ ++++ D M  L    SV S   +   + +RG 
Sbjct: 256 MVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGH 315

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A R    +   G+ P     N ++       +   A R F  M +RG+  + VTY  
Sbjct: 316 IDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAI 375

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+   +   MD+A  +F  M+EK I  TV  Y ++I GY   +    A  + +EM    
Sbjct: 376 LIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKG 435

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P+A +Y+ L+ GLC  G +    ++ REM    +   +   F  L+   CK G+++ A
Sbjct: 436 LAPSAASYSPLIAGLCRKGDLASAMELHREMARNGV-SGNVYTFTTLISGFCKDGNMDEA 494

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
           A +   MI  S+      + ++IE +C+     +A +L D++V++   L P +       
Sbjct: 495 ARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG--LTPDNY------ 546

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y  +I  LC      KA+ F   L     VL+  +   L+ G  KEG     + I   M
Sbjct: 547 TYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEM 606

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             RGV  D  ++  ++ + L+  +          M E G  P +     +++   ++  +
Sbjct: 607 RARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENI 666

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
             A      M+  G   N+     ++  L   G++  A    + M+    +PN   ++  
Sbjct: 667 VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCF 726

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           L  L+ +G+ +   K+L   +   C+ +  ++  ++     AG+   A  ++    E G 
Sbjct: 727 LDFLANEGE-LEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGF 785

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA 640
             D  S   +I  L + G+  +A
Sbjct: 786 FPDCISYSTIINELCKVGDINKA 808



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 120/543 (22%), Positives = 242/543 (44%), Gaps = 14/543 (2%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +++   K+G + ++ ++   + +LG+  ++ + +AL   + +  R+  A+R F  M + G
Sbjct: 306 MVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRG 365

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +EP   TY +++        ++ A+  F+ M+ +GI + V  YN++INGY +     +A 
Sbjct: 366 LEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQAR 425

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L  EM EK + P+  SY+ +I G         A+ +  EM    V  N  T+T L+ G 
Sbjct: 426 GLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGF 485

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  G M E  ++  +M++  + P + + F  ++   C+ G++  A  +   M+   +  +
Sbjct: 486 CKDGNMDEAARLFDKMIDSSVVPNEVT-FNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPD 544

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI   C      +A + +D L    ++L         + S   ++   C  G+ 
Sbjct: 545 NYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVL--------NSFSLTTLMYGFCKEGRL 596

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +    + ++  +GV LD ++F  ++    K  + +    + + M  +GV  D   + C+
Sbjct: 597 TETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCM 656

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I+ + ++     A    D MI DG SP    +  ++  L + G + +A  + + M+    
Sbjct: 657 IDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRF 716

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
             N       L+ L   G +E+A   +   +  G + N   F++L+    + G+   A+ 
Sbjct: 717 LPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAID 775

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           L+          D  SY  +++ L   G    A+ +  +++ KG   D  + + LI   N
Sbjct: 776 LMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCN 835

Query: 633 QEG 635
             G
Sbjct: 836 IHG 838



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 231/510 (45%), Gaps = 52/510 (10%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L +  +   A  +   M  +G++ +E  + +LI S  K+G++ +++ +FD M++ G
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V  Y++L     +   +  A+   N+M+ +G+ P+  +Y+ ++ G      L +A+
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M   G+S +V T+ T+I+G+ +   MDEA +LF +M + ++ P  +++  MI+GY
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGY 520

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
             V     A +++D+M    + P+  TY +L+  LC     ++ ++ + ++    +    
Sbjct: 521 CRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNS 580

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            S+   + G  CK G L                TE  H           EM  R +KL  
Sbjct: 581 FSLTTLMYGF-CKEGRL----------------TETYHIW--------DEMRARGVKL-- 613

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
            L+   +I+     L               H+G+  K  + FR++ +KGV  D V    +
Sbjct: 614 DLISFTVIVYAALKL---------------HDGE--KISVLFREMKEKGVKPDNVFHTCM 656

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I  HSKE N   A      M   G   +   Y  LI    + G  + A+   + M+    
Sbjct: 657 IDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRF 716

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P S  +   ++ L  +G ++ A +V+ + + +G   N      +++     G ++   G
Sbjct: 717 LPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQIQ---G 772

Query: 541 RIDLM---MQSGSVPNFDSLLSVLSEKGKT 567
            IDLM    +SG  P+  S  ++++E  K 
Sbjct: 773 AIDLMQNNTESGFFPDCISYSTIINELCKV 802



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 119/506 (23%), Positives = 226/506 (44%), Gaps = 28/506 (5%)

Query: 125 SVKSYDA---LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++K Y A   LF LI  R ++ +A+  F++M+        + Y   +  +     L+ A 
Sbjct: 157 AMKQYTASQILFALIKIR-QFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGAR 215

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
                M+S+G+    V YN ++ G  R  ++ EA ++   M E+ I    ++Y T++ G+
Sbjct: 216 GLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGF 275

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK- 300
              E  + AL + D+M S    P+  + + ++ GL   G + +  ++   + E  + P  
Sbjct: 276 CRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNL 335

Query: 301 --DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
              N++  KL    CK      A  + + M    +      Y ILI + CK  M D A+ 
Sbjct: 336 FACNALIDKL----CKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALC 391

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-F 417
           + D++ EK I         +    YN +I   C +    +A     ++++KG+    A +
Sbjct: 392 MFDRMREKGI--------RVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASY 443

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           + LI G  ++G+  SA E+ + M R GV  +   +  LI  + + G   +A    D MI+
Sbjct: 444 SPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMID 503

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
               P    F  ++E     G V+ A ++   MV++G+  +      ++  L +     +
Sbjct: 504 SSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMK 563

Query: 538 ALGRIDLMMQSGSVPNFDSLLSVL---SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A   +D +  +  V N  SL +++    ++G+      + D    R   +DL S+  ++ 
Sbjct: 564 AKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVY 623

Query: 595 ALLAA--GKTLNAYSILFKIMEKGGV 618
           A L    G+ +   S+LF+ M++ GV
Sbjct: 624 AALKLHDGEKI---SVLFREMKEKGV 646


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 134/577 (23%), Positives = 244/577 (42%), Gaps = 71/577 (12%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L   G+L  A  +  +M +KG Q     + VLI++    G+  +++K+ D M
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 326

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
                  +V +Y  L   + R G+   A   F KML  G+ P   T+N ++ G+     +
Sbjct: 327 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 386

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            +A +    M+      ++ TYN ++ G  R  K  +A  L   + +  + P  ++Y  +
Sbjct: 387 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 446

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G+    + + A  IF+ M S  ++P+  T+TAL+ GLC  G++ +   +L  MV++ I
Sbjct: 447 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506

Query: 298 PPKDNSVFMKLLGVQCKSG-----------------------------------HLNAAA 322
              D   F  L+   CK G                                    LN A 
Sbjct: 507 -SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEAN 565

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +L  M++  +      + ILIE  C+A     ++K+L+++         Q+       +
Sbjct: 566 AMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM--------KQAGCSPNVYT 617

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN--LIRGHSKEGNPDSAFEIVKIM 440
           Y  +I  LC+NG+  +AE     +   GV  P  F    L++ H K G  D AF+IV  M
Sbjct: 618 YTIIINGLCNNGRVEEAETILFSMSSFGV-SPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 676

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAK--------------------TALDSMIEDGH 480
            + G   ++  Y  L+  ++       A+                      L + I+   
Sbjct: 677 VKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCG 736

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P   L+  ++  L ++GR+  A ++ + MV+ G+  +   ++ I+E        +  L 
Sbjct: 737 VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLE 795

Query: 541 RIDLMMQSGSVPNFDSLLSV---LSEKGKTIAAVKLL 574
            + L++ +  VP+F S   V   L  +G+   A KL+
Sbjct: 796 FMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLV 832



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 145/624 (23%), Positives = 274/624 (43%), Gaps = 33/624 (5%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR--CILLDMPKKGVQWD 90
           + N E  ++FF+WV R   + +D +  ++++ +L        A+   +LL      +Q  
Sbjct: 80  SNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLL------IQEC 133

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
           ED          + G+V+  +   D M +LG   S   Y  L   + +     +A   + 
Sbjct: 134 ED---------SENGVVK-LMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYR 183

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +M++EG       Y  ++     +  ++ A  F   +   G  LD     +++    R  
Sbjct: 184 RMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRD 243

Query: 211 KMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
            + EA ++F +M KE+N  P  ++Y+ +I G     R ++A ++  EM     +P+  TY
Sbjct: 244 DLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 303

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           T L+   CD G   +  K+L EM  +   P  ++ +  L+   C+ G +  A  V + M+
Sbjct: 304 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHT-YTILIDRLCREGKIEEANGVFRKML 362

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           +  +      +  LI  +CK      A +LL  ++EK               +YN +++ 
Sbjct: 363 KHGLCPGIITFNALINGYCKEGWVVSAFQLLS-VMEK-------GNCKPNIRTYNELMEG 414

Query: 390 LCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC   ++ KA +  R+++  G+L D V +N L+ G  KEG  + AF I   M   G+  D
Sbjct: 415 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 474

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              +  LI+   + G    A   L SM++ G S     F ++++   + G+ +    + +
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 534

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKG 565
           +MVE             L+AL     + EA   +  MM+ G VP+  +   L+      G
Sbjct: 535 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 594

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +T  ++K+L+      C  ++ +Y  +++ L   G+   A +ILF +   G   +  +  
Sbjct: 595 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 654

Query: 626 KLIAGLNQEGNTKQA-DILSRMIR 648
            L+    + G   +A  I+S M++
Sbjct: 655 VLVKAHVKAGRLDRAFQIVSTMVK 678



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 191/425 (44%), Gaps = 38/425 (8%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A   F  +  AGL   D  T   +I+ L ++G+L  A  IL  M KKG+  DE  F  LI
Sbjct: 459 AFNIFNSMNSAGL-EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 517

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + + K G  ++   +F+ M +     +  +++     + +  +   A     KM+  G+ 
Sbjct: 518 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 577

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P+  T+ +++ G   + +   +++  E MK  G S +V TY  +ING     +++EAE +
Sbjct: 578 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 637

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              M    + P   +Y  ++K +V   R D A +I   M     +PN+  Y+ALL G   
Sbjct: 638 LFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVL 697

Query: 279 AGKMVEVQK---------------------VLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           +   +  +                      +  E+ +  +P +D   F+ ++G+ CK G 
Sbjct: 698 SNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFL-VVGL-CKEGR 755

Query: 318 LNAAADVLKAMIRLSI-PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
           +  A  + + M++  + P +A     +IE++CK   YD  ++ +  +++ + +  P    
Sbjct: 756 IIEADQLTQDMVKHGLFPDKA--ISSIIEHYCKTCKYDNCLEFMKLVLDNKFV--PS--- 808

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSK--EGNPDSA 433
               +SY  +I  L + G+  +A+     L++  G+ + V     I    K  E +PD  
Sbjct: 809 ---FASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDKC 865

Query: 434 FEIVK 438
            +++K
Sbjct: 866 LKLIK 870



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 112/491 (22%), Positives = 196/491 (39%), Gaps = 61/491 (12%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           S  A    R V   GL   DR T+  +++   + G+LN A  I   M   G++ D   F 
Sbjct: 421 SYKAFLLLRRVVDNGLL-PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 479

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI+   K G ++++  I   M + G+     ++ AL     + G+       F  M+  
Sbjct: 480 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 539

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
               T HT+N  L       KL  A      M   G+   VVT+  +I G+ R  +   +
Sbjct: 540 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 599

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            K+   MK+    P V +YT +I G     R ++A  I   M SF V PN  TY  L+  
Sbjct: 600 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 659

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
              AG++    +++  MV+    P ++ ++  LL                          
Sbjct: 660 HVKAGRLDRAFQIVSTMVKNGCQP-NSHIYSALLS------------------------- 693

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
                G ++ N     +  RA+                ST D++A S          + +
Sbjct: 694 -----GFVLSN---TAIGARAL---------------SSTGDLDARSL---------SSE 721

Query: 396 TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
                    ++ K GV     +N L+ G  KEG    A ++ + M + G+  D  A   +
Sbjct: 722 ENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSI 780

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV-EKG 514
           IE Y +  +  +    +  ++++   P+ + +  V+  L  +GRVQ A +++  +V   G
Sbjct: 781 IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTG 840

Query: 515 VKENLDLVAKI 525
           ++E +++   I
Sbjct: 841 IEEEVEVTPSI 851


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 134/551 (24%), Positives = 240/551 (43%), Gaps = 68/551 (12%)

Query: 6   WTTRLQNKIRA-LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERA-GLFNHDRETHLKMI 63
           W   L+ KI + L     H ++Y +   ++    +   F+W+E +   + H  ++   MI
Sbjct: 26  WNNLLRPKICSILTASTLHQVLYQLSLHSQGPCLSWALFKWIESSIPNYKHSLQSSWTMI 85

Query: 64  EILGRVGKLNHARCILLDMPKKG-----------VQWDED------MFEVLIESYGKKGI 106
            IL +   L  A+ +L  +  +            V+  +D      +F  L+  Y    +
Sbjct: 86  HILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKM 145

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
            QE++++F+ M   G    + +   L   + +     M  + + KM   G+E   H YNV
Sbjct: 146 KQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNV 205

Query: 167 MLWGFFLSLKLETAIRFFEDMKSR-----------------------------------G 191
           ++     S  +E A     +M+S+                                   G
Sbjct: 206 LIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREG 265

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           I  D+VTYN++I+G+ +  +M EA +LF E+++    P  ++YTT+I GY  +   D AL
Sbjct: 266 IKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--PNHVTYTTLIDGYCRLNDLDQAL 323

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           R+ +EM++  + P  VTY ++L  LC+ G++ +  K+L EM E+ I P DN     L+  
Sbjct: 324 RLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEP-DNVTCNTLINA 382

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
            CK G + +A  V   M+   +  +   Y  LI  FCK    D A +LL  +++      
Sbjct: 383 YCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLD------ 436

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEI-FFRQLMKKGV-LDPVAFNNLIRGHSKEGN 429
             +       +Y+ ++   C N Q  +A +    + ++KG+ +D   +  LIR   K   
Sbjct: 437 --AGFSPSYCTYSWLVDGYC-NQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQ 493

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
            D A +I  +M  +G   D+  Y  L  +Y + G+   A   LD M +        ++R+
Sbjct: 494 VDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRA 553

Query: 490 VMESLFEDGRV 500
           +  S   D  +
Sbjct: 554 LNASYAGDNSI 564


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 194/415 (46%), Gaps = 10/415 (2%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G+  +   + +LI  + +   +  ++ +   M +LG E  + + ++L        R   A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
               ++M+  G +P   T+  ++ G FL  K   A+   + M  RG   D+VTY  ++NG
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227

Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
             +    D A  L  +M+   IE  V+ Y+T+I         DDAL +F EM++  V+PN
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287

Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
            +TY++L+  LC+ G+  +  ++L +M+ER I P +   F  L+    K G L  A  + 
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINP-NLVTFSALIDAFVKKGKLVKAEKLY 346

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
           + MI+ SI      Y  LI  FC  +    A ++L+ ++ K+ +  P         +YN 
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL--PN------VVTYNT 398

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           +I   C   +  K    FR++ ++G++ + V +  LI G  +  + D+A  + K M   G
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           V  +   Y  L++   + G+ A A    + +      P    +  ++E + + G+
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 190/413 (46%), Gaps = 10/413 (2%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           +H+  T+  +I    R  +L+ A  +L  M K G + D      L+  +     + ++V 
Sbjct: 110 SHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVA 169

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           + D M ++G +    ++  L   +    +   A    ++M+  G +P   TY  ++ G  
Sbjct: 170 LVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
                + A+     M++  I  +VV Y+T+I+   +++  D+A  LF EM+ K + P VI
Sbjct: 230 KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 289

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           +Y+++I       R  DA R+  +M    + PN VT++AL+      GK+V+ +K+  EM
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349

Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
           ++R I P +   +  L+   C    L  A  +L+ MIR         Y  LI  FCKA+ 
Sbjct: 350 IKRSIDP-NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408

Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
            D+ ++L  ++ ++ ++            +Y  +I           A++ F+Q++  GV 
Sbjct: 409 VDKGMELFREMSQRGLV--------GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
            + + +N L+ G  K G    A  + + + R  +  D   Y  +IE   + G+
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 159/326 (48%), Gaps = 3/326 (0%)

Query: 25  LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
           L++ +    K SE      R V+R      D  T+  ++  L + G  + A  +L  M  
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGC--QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
             ++ +  ++  +I+S  K     +++ +F  M+  GV  +V +Y +L   +   GR+  
Sbjct: 247 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSD 306

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A R  + M+   I P   T++ ++  F    KL  A + +E+M  R I  ++ TY+++IN
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
           G+    ++ EA+++   M  K+  P V++Y T+I G+   +R D  + +F EM    +  
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           N VTYT L+ G   A      Q V ++MV   + P   +  + L G+ CK+G L  A  V
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL-CKNGKLAKAMVV 485

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKA 350
            + + R ++  +   Y I+IE  CKA
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIEGMCKA 511



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 184/381 (48%), Gaps = 11/381 (2%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           ++L+    HG + S+      + VE    +  D  T   +I  L    K + A  ++  M
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMG--YKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            ++G Q D   +  ++    K+G    ++ + + M+   +E +V  Y  +   + +    
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 269

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A   F +M ++G+ P   TY+ ++       +   A R   DM  R I+ ++VT++ +
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+ + +  K+ +AEKL+ EM +++I+P + +Y+++I G+  ++R  +A ++ + M   D 
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN VTY  L+ G C A ++ +  ++ REM +R +   +   +  L+    ++   + A 
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV-GNTVTYTTLIHGFFQARDCDNAQ 448

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            V K M+ + +      Y IL++  CK     +A+ + + L         +ST++ +  +
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL--------QRSTMEPDIYT 500

Query: 383 YNPMIQHLCHNGQTGKAEIFF 403
           YN MI+ +C  G+     I+F
Sbjct: 501 YNIMIEGMCKAGKWKMGGIYF 521



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/455 (20%), Positives = 198/455 (43%), Gaps = 29/455 (6%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++ +F +M Q     S+  +  L   I +  ++ +   +  KM   GI    +TYN+
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    +L  A+     M   G   D+VT N+++NG+    ++ +A  L  +M E  
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P  +++TT+I G     +A +A+ + D M     +P+ VTY A++ GLC  G      
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +L +M    I   +  ++  ++   CK  H + A ++   M    +      Y  LI  
Sbjct: 239 NLLNKMEAAKIEA-NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 347 FCKAEMYDRAIKLLDKLVEKEI-------------------ILRPQS--------TLDME 379
            C    +  A +LL  ++E++I                   +++ +         ++D  
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +Y+ +I   C   + G+A+     +++K  L + V +N LI G  K    D   E+ +
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M +RG+  +   Y  LI  + +  +  +A+     M+  G  P    +  +++ L ++G
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           ++  A  V + +    ++ ++     ++E +   G
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/487 (18%), Positives = 193/487 (39%), Gaps = 46/487 (9%)

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
           T + Y  +L      ++L+ AI  F  M        ++ ++ +++   +  K D      
Sbjct: 42  TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
            +M+   I   + +Y  +I  +    R   AL +  +M     +P+ VT  +LL G C  
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
            ++ +   ++ +MVE    P D   F  L+         + A  ++  M++     +   
Sbjct: 162 NRISDAVALVDQMVEMGYKP-DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           YG ++   CK    D A+ LL+K+   +I        +     Y+ +I  LC        
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKI--------EANVVIYSTVIDSLC-------- 264

Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
                                     K  + D A  +   M  +GV  +   Y  LI   
Sbjct: 265 --------------------------KYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
              G  +DA   L  MIE   +P    F +++++  + G++  A ++ + M+++ +  N+
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
              + ++    M   + EA   ++LM++   +PN   +++L++   +  +    ++L   
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
              R  + +  +Y  ++     A    NA  +  +++  G   +  + + L+ GL + G 
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478

Query: 637 TKQADIL 643
             +A ++
Sbjct: 479 LAKAMVV 485



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 4/237 (1%)

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           + F+ L+   +K    D      + M   G+  +   Y  LI  + R    + A   L  
Sbjct: 79  IEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGK 138

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M++ G+ P      S++       R+  A  ++  MVE G K +      ++  L +   
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
             EA+  ID M+Q G  P+   + ++++ L ++G T  A+ LL+         ++  Y  
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           V+D+L       +A ++  ++  KG   +  +   LI+ L   G    A  +LS MI
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 227/499 (45%), Gaps = 38/499 (7%)

Query: 78  ILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
           +L D M K+G   +   F VLIE + K G ++++++ +  M+ LG+  SV     + +  
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW 419

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
           L+  ++  A + F++    G+        ++ W      K + A      M+SRGI  +V
Sbjct: 420 LKGQKHEEALKLFDESFETGLANVFVCNTILSW-LCKQGKTDEATELLSKMESRGIGPNV 478

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           V+YN ++ G+ R K MD A  +F+ + EK ++P   +Y+ +I G        +AL + + 
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC--- 313
           M S +++ N V Y  ++ GLC  G+  + +++L  M+E            K L V C   
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE-----------KRLCVSCMSY 587

Query: 314 --------KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
                   K G +++A    + M    I      Y  L+   CK    D+A+++ D++  
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA--FNNLIRG 423
           K +       LD+ A  Y  +I   C       A   F +L+++G L+P    +N+LI G
Sbjct: 648 KGV------KLDIPA--YGALIDGFCKRSNMESASALFSELLEEG-LNPSQPIYNSLISG 698

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
               GN  +A ++ K M + G+  D   Y  LI+  L+ G    A      M   G  P 
Sbjct: 699 FRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPD 758

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
             ++  ++  L + G+     ++ + M +  V  N+ +   ++      G+++EA    D
Sbjct: 759 EIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHD 818

Query: 544 LMMQSGSVPN---FDSLLS 559
            M+  G +P+   FD L+S
Sbjct: 819 EMLDKGILPDGATFDILVS 837



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/550 (22%), Positives = 257/550 (46%), Gaps = 15/550 (2%)

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
           ++ +  +I +  K+G + +++++ D M   G+  +V +  +L     +    + A   F+
Sbjct: 304 QETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFD 363

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           KM  EG  P   T++V++  F  + ++E A+ F++ M+  G++  V   +T+I G+ + +
Sbjct: 364 KMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQ 423

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           K +EA KLF E  E  +   V    T++       + D+A  +  +M+S  + PN V+Y 
Sbjct: 424 KHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYN 482

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            ++ G C    M   + V   ++E+ + P +N  +  L+    ++     A +V+  M  
Sbjct: 483 NVMLGHCRQKNMDLARIVFSNILEKGLKP-NNYTYSILIDGCFRNHDEQNALEVVNHMTS 541

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
            +I      Y  +I   CK     +A +LL  ++E       +  L +   SYN +I   
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE-------EKRLCVSCMSYNSIIDGF 594

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
              G+   A   + ++   G+  + + + +L+ G  K    D A E+   M  +GV  D 
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
            AY  LI+ + ++     A      ++E+G +P+  ++ S++      G +  A  + K 
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M++ G++ +L     +++ LL  G++  A      M   G VP+   +  +++ LS+KG+
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
            +  VK+ +     +   ++  Y  V+      G    A+ +  ++++KG + D  + D 
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834

Query: 627 LIAGLNQEGN 636
           L++G  Q GN
Sbjct: 835 LVSG--QVGN 842



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 140/656 (21%), Positives = 286/656 (43%), Gaps = 39/656 (5%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVE--RAGLFNHD------------RETHLKMIEILG 67
           D +++  +L+   N E AL+F+ W    R    + D             ET+ +  ++L 
Sbjct: 72  DASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLI 131

Query: 68  RVGKLNHARCI-------LLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
           R    ++   +       L+D  K  G + +   F  L+ +Y K      +V I + M +
Sbjct: 132 RYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLE 191

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
           L V       +     +++R     AK  +++M++ G++    T  +++       K   
Sbjct: 192 LDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAE 251

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI-EPTVISYTTMI 238
           A+        RG   D + Y+  +    +   +  A  L  EMKEK +  P+  +YT++I
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
              V     DDA+R+ DEM S  +  N V  T+L+ G C    +V    VL + +E+  P
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL-VLFDKMEKEGP 370

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
             ++  F  L+    K+G +  A +  K M  L +     H   +I+ + K + ++ A+K
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
           L D+  E  +               N ++  LC  G+T +A     ++  +G+  + V++
Sbjct: 431 LFDESFETGL---------ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSY 481

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           NN++ GH ++ N D A  +   +  +G+  +   Y  LI+   R  +  +A   ++ M  
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV-EKGVKENLDLVAKILEALLMRGHVE 536
                   ++++++  L + G+   A  ++ +M+ EK +  +      I++     G ++
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
            A+   + M  +G  PN   + SL++ L +  +   A+++ D    +   +D+ +Y  ++
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIR 648
           D         +A ++  +++E+G        + LI+G    GN   A D+  +M++
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 202/490 (41%), Gaps = 80/490 (16%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
              W  + G      E + KM E+LG    + H   I+    K   Q  E+  ++  ES+
Sbjct: 380 LIEWFRKNGEMEKALEFYKKM-EVLGLTPSVFHVHTIIQGWLKG--QKHEEALKLFDESF 436

Query: 102 -----------------GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
                             K+G   E+ ++   M+  G+  +V SY+ +     R+    +
Sbjct: 437 ETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A+  F+ +L +G++P  +TY++++ G F +   + A+     M S  I ++ V Y T+IN
Sbjct: 497 ARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556

Query: 205 G-----------------------------YNR-----FKK--MDEAEKLFAEMKEKNIE 228
           G                             YN      FK+  MD A   + EM    I 
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P VI+YT+++ G     R D AL + DEMK+  VK +   Y AL+ G C    M     +
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL 676

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             E++E  + P    ++  L+      G++ AA D+ K M++  +  + G Y  LI+   
Sbjct: 677 FSELLEEGLNPSQ-PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735

Query: 349 K-------AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
           K       +E+Y     +   LV  EII             Y  ++  L   GQ  K   
Sbjct: 736 KDGNLILASELYTEMQAV--GLVPDEII-------------YTVIVNGLSKKGQFVKVVK 780

Query: 402 FFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F ++ K  V   V  +N +I GH +EGN D AF +   M  +G+  D   +  L+   +
Sbjct: 781 MFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQV 840

Query: 461 RKGEPADAKT 470
              +P  A +
Sbjct: 841 GNLQPVRAAS 850



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 1/132 (0%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL  ++ + + GL   D  T+  +I+ L + G L  A  +  +M   G+  DE ++ V++
Sbjct: 708 ALDLYKKMLKDGL-RCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
               KKG   + VK+F+ MK+  V  +V  Y+A+     R G    A R  ++ML +GI 
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826

Query: 159 PTRHTYNVMLWG 170
           P   T+++++ G
Sbjct: 827 PDGATFDILVSG 838



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 1/171 (0%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N E A   F  +   GL N  +  +  +I     +G +  A  +   M K G++ D   +
Sbjct: 669 NMESASALFSELLEEGL-NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             LI+   K G +  + +++  M+ +G+      Y  +   + ++G+++   + F +M  
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK 787

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
             + P    YN ++ G +    L+ A R  ++M  +GI  D  T++ +++G
Sbjct: 788 NNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838


>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
 gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
          Length = 718

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 199/436 (45%), Gaps = 12/436 (2%)

Query: 3   ERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRW-VERAGLFNHDRETHLK 61
           ERA    L N    L    D+  +   L    + + A+  F + V+R    N   +    
Sbjct: 23  ERALENVLLNFESRLSGSDDYVFLLRELGNRGDCKKAICCFEFAVKRERKKNEQGKLASA 82

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI  LGR+GK+  A+ +      +G       F  +I +YG+ G   E++KIF  MK  G
Sbjct: 83  MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142

Query: 122 VERSVKSYDALFKLILRRG-RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           ++ ++ +Y+A+     + G  +      F++ML  G++P R T+N +L         E A
Sbjct: 143 LKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAA 202

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
                +M +RGI  D+ TYNT+++   +  ++D A ++ +EM  KNI P V++Y+TMI G
Sbjct: 203 RSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDG 262

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y    R DDA  +F+EMK   +  + V+Y  LL      G+  E   V REM    I  K
Sbjct: 263 YAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGI-RK 321

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  LLG   K    +    V + M    +      Y  LI+ + K  +Y  A+ + 
Sbjct: 322 DVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVF 381

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
            +          ++ L  +   Y+ +I  LC NG    A     ++ K+G+  + V +N+
Sbjct: 382 REF--------KKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 433

Query: 420 LIRGHSKEGNPDSAFE 435
           +I    +    +S  +
Sbjct: 434 IIDAFGRPATTESVVD 449



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 176/380 (46%), Gaps = 15/380 (3%)

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           + MI+   R  K++ A+ +F     +    TV +++ +I  Y      ++A++IF  MK 
Sbjct: 81  SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLR---EMVERYIPPKDNSVFMKLLGVQCKSG 316
           + +KPN VTY A++      G  VE ++VL    EM+   + P D   F  LL V  K G
Sbjct: 141 YGLKPNLVTYNAVIDACGKGG--VEFKRVLEIFDEMLRNGMQP-DRITFNSLLAVCSKGG 197

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
              AA  +   M+   I  +   Y  L++  CK    D A +++ ++  K I+  P    
Sbjct: 198 LWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNIL--PNVV- 254

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                +Y+ MI      G+   A   F ++   G+ LD V++N L+  ++K G  + A +
Sbjct: 255 -----TYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMD 309

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           + + M   G+ +D   Y  L+  Y ++ +    +   + M     SP    + ++++   
Sbjct: 310 VCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYS 369

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
           + G  + A  V +   + G+K ++ L + +++AL   G VE A+  +D M + G  PN  
Sbjct: 370 KGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 429

Query: 556 SLLSVLSEKGKTIAAVKLLD 575
           +  S++   G+      ++D
Sbjct: 430 TYNSIIDAFGRPATTESVVD 449



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 126/244 (51%), Gaps = 10/244 (4%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           + D  T+  +++ + + G+L+ A  I+ +MP K +  +   +  +I+ Y K G + ++  
Sbjct: 215 DQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARN 274

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           +F+ MK LG+     SY+ L  +  + GR+  A     +M + GI     TYN +L G+ 
Sbjct: 275 LFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYG 334

Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
              K +   + FE+MK+R +S +++TY+T+I+ Y++     EA  +F E K+  ++  V+
Sbjct: 335 KQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVV 394

Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC----------DAGKM 282
            Y+ +I         + A+ + DEM    ++PN VTY +++              DAG+ 
Sbjct: 395 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQT 454

Query: 283 VEVQ 286
            E+Q
Sbjct: 455 SELQ 458



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 201/456 (44%), Gaps = 50/456 (10%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFD--IMKQLGVERSVKSYDALFKL 135
           +LL+   +    D+ +F  L+   G +G  ++++  F+  + ++       K   A+   
Sbjct: 29  VLLNFESRLSGSDDYVF--LLRELGNRGDCKKAICCFEFAVKRERKKNEQGKLASAMIST 86

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           + R G+  MAK  F   L+EG   T + ++ ++  +  S     AI+ F  MK  G+  +
Sbjct: 87  LGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPN 146

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           +VTYN +I+                                  KG V  +R    L IFD
Sbjct: 147 LVTYNAVIDACG-------------------------------KGGVEFKR---VLEIFD 172

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR-EMVERYIPPKDNSVFMKLLGVQCK 314
           EM    ++P+ +T+ +LL  +C  G + E  + L  EMV R I  +D   +  LL   CK
Sbjct: 173 EMLRNGMQPDRITFNSLLA-VCSKGGLWEAARSLSCEMVNRGI-DQDIFTYNTLLDAVCK 230

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G L+ A +++  M   +I      Y  +I+ + KA   D A  L +++           
Sbjct: 231 GGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEM--------KFL 282

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
            + ++  SYN ++      G+  +A    R++   G+  D V +N L+ G+ K+   D  
Sbjct: 283 GISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVV 342

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            ++ + M  R V  +   Y  LI+ Y + G   +A        + G      L+ +++++
Sbjct: 343 RKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDA 402

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
           L ++G V++A  ++  M ++G++ N+     I++A 
Sbjct: 403 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 438



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 6/191 (3%)

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +I +  R G+   AKT   + + +G+      F +++ +    G    A ++  SM + G
Sbjct: 83  MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142

Query: 515 VKENLDLVAKILEALLMRGHVE--EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           +K NL     +++A   +G VE    L   D M+++G  P+   F+SLL+V S+ G   A
Sbjct: 143 LKPNLVTYNAVIDAC-GKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEA 201

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A  L    + R    D+ +Y  +LDA+   G+   A+ I+ ++  K  + +  +   +I 
Sbjct: 202 ARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMID 261

Query: 630 GLNQEGNTKQA 640
           G  + G    A
Sbjct: 262 GYAKAGRLDDA 272



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 61/303 (20%), Positives = 123/303 (40%), Gaps = 32/303 (10%)

Query: 25  LVYNVLHGAKNSEHALQFFRWV---ERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           + YN L G    ++     R V    +A   + +  T+  +I++  + G    A  +  +
Sbjct: 324 VTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFRE 383

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
             K G++ D  ++  LI++  K G+V+ +V + D M + G+  +V +Y+++     R   
Sbjct: 384 FKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPAT 443

Query: 142 Y--------MMAKRYFNKMLSEGIEPTRHTY-----NVMLWGFFLSLKLETA-------- 180
                      ++   + + S  +E    +      +  +   F  L  E A        
Sbjct: 444 TESVVDDAGQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGG 503

Query: 181 ------IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
                 +  F  M    I  +VVT++ ++N  +R    +EA  L  E++  + +   +++
Sbjct: 504 QEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELRLFDNQVYGVAH 563

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ GY      + A  +FDE+K  D    +  Y AL   L   G+    Q V+ E   
Sbjct: 564 -GLLMGYRE-NVWEQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKR 621

Query: 295 RYI 297
           R +
Sbjct: 622 RQV 624


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/600 (21%), Positives = 257/600 (42%), Gaps = 51/600 (8%)

Query: 39  ALQFFRWVERAGLFNH--DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
            L+ F W  +   FN   D  +   ++++L R         +L  M  K +    +    
Sbjct: 80  GLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSF 139

Query: 97  LIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           ++ +Y   G+V  +++++ I   +      V + +AL   ++++ +  +A++ + +M+  
Sbjct: 140 VVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKR 199

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
                 ++  +M+ G     K+E   +   D   +G   ++V YNT+++GY +   ++ A
Sbjct: 200 DGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERA 259

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKG------YVAV--------ERADDA-LRIFDEMKSF 260
             LF E+K K   PT  +Y  MI G      + AV        ER  D  +++++ +   
Sbjct: 260 NGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDA 319

Query: 261 DVK--------------------PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
            +K                    P+  TY  L+ G C  GK+ E +++L   ++R + P 
Sbjct: 320 QIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPN 379

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
             S +  L+ V CK G    A D+   M     P +   YG L+     A   D A+ + 
Sbjct: 380 KLS-YTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVR 438

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
           DK+VE+ ++         +A+ YN ++  LC  G+   A++   +++ + + LD      
Sbjct: 439 DKMVERGVL--------PDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSAT 490

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           L+ G  + G  D A ++ ++   +G+      Y  +I+ Y + G   DA T +  M +  
Sbjct: 491 LVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGD 550

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
           HSP    + ++++   +   +  A ++   MV++  K N+     ++      G    A 
Sbjct: 551 HSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAE 610

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
              + M  SG  PN   +  L+    ++GK   A    +  L   CI +  ++  +++ L
Sbjct: 611 KTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGL 670



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 133/590 (22%), Positives = 245/590 (41%), Gaps = 33/590 (5%)

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
           K+  AR +  +M K+   WD     +++    K+  V+E  K+ +     G   ++  Y+
Sbjct: 185 KVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYN 244

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L     +RG    A   F ++  +G  PT  TY +M+ G       +       +MK R
Sbjct: 245 TLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKER 304

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G+ ++V  YN++++   +     E  K    + E   EP + +Y T+I G     +  +A
Sbjct: 305 GVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEA 364

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
             + +      + PN ++YT L+   C  GK +    +   M E+   P D   +  L+ 
Sbjct: 365 EELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKG-HPLDLVAYGALVH 423

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
               +G ++ A  V   M+   +  +A  Y +L+   CK      A  LL +++ +    
Sbjct: 424 GLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQ---- 479

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEG 428
                L ++A     ++     +G+  +A+  F   + KG +DP  V +N +I+G+ K G
Sbjct: 480 ----NLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKG-MDPGVVGYNAMIKGYCKFG 534

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             + A   V+ M       D   Y  +I+ Y+++ +  +A      M++    P    + 
Sbjct: 535 MMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYT 594

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           S++      G    A +  + M   G+K N+     ++      G + +A    +LM+ +
Sbjct: 595 SLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLN 654

Query: 549 GSVPN---FDSLLSVLSEKGKT-----------IAAVKLLDFCLGRDCIID-----LASY 589
             +PN   F+ L++ L+    T           I A  ++DF   R  I D     +A+Y
Sbjct: 655 RCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDF--FRTMISDGWEQRVAAY 712

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
             VL  L        A  +  K+  KG   D  S   L+ GL  EG +K+
Sbjct: 713 NSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKE 762



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 210/489 (42%), Gaps = 26/489 (5%)

Query: 43  FRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYG 102
            RW+   G    D  T+  +I    R GK++ A  +L    K+G+  ++  +  LI  Y 
Sbjct: 333 LRWITENGC-EPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYC 391

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           K+G    +  +F  M + G    + +Y AL   ++  G   +A    +KM+  G+ P  +
Sbjct: 392 KQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDAN 451

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
            YNV++ G     +L  A     +M  + +SLD     T+++G+ R  K+DEA+KLF   
Sbjct: 452 VYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELT 511

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
             K ++P V+ Y  MIKGY      +DAL     MK  D  P+  TY+ ++ G      +
Sbjct: 512 IAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDL 571

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
               K+  +MV++   P +   +  L+   C++G  + A    + M    +      Y I
Sbjct: 572 HNALKLFGQMVKQKCKP-NVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTI 630

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG----- 397
           LI  FCK     +A    + ++    I  P         ++N +I  L +N  T      
Sbjct: 631 LIGCFCKEGKISKACSFFELMLLNRCI--PNDV------TFNYLINGLTNNLATAVSNKA 682

Query: 398 ------KAEI---FFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
                 KA +   FFR ++  G    V A+N+++         ++A ++   M  +G+  
Sbjct: 683 NESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFP 742

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D  ++  L+     +G   + K  +   + +     +  +   +      G    AS+V 
Sbjct: 743 DPVSFAALVYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVF 802

Query: 508 KSMVEKGVK 516
            +++E GVK
Sbjct: 803 HTLLE-GVK 810



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 115/523 (21%), Positives = 209/523 (39%), Gaps = 47/523 (8%)

Query: 46  VERA-GLFNH--------DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           VERA GLF            ET+  MI  L +         +L++M ++GV  +  ++  
Sbjct: 256 VERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNS 315

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++++  K G   E  K    + + G E  + +Y+ L     R G+   A+      +  G
Sbjct: 316 IVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRG 375

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P + +Y  ++  +    K   A   F  M  +G  LD+V Y  +++G     ++D A 
Sbjct: 376 LSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVAL 435

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +  +M E+ + P    Y  ++ G     R   A  +  EM   ++  +A     L+ G 
Sbjct: 436 TVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGF 495

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
              GK+ E +K+    + + + P     +  ++   CK G +N A   ++ M       +
Sbjct: 496 IRHGKLDEAKKLFELTIAKGMDPGVVG-YNAMIKGYCKFGMMNDALTCVQRMKDGDHSPD 554

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  +I+ + K      A+KL  ++V+++   +P         +Y  +I   C  G +
Sbjct: 555 EFTYSTIIDGYVKQNDLHNALKLFGQMVKQKC--KPNVV------TYTSLINGFCRTGDS 606

Query: 397 GKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIM-GRRGVPRDADAYI 453
            +AE  F ++   G L P  V +  LI    KEG    A    ++M   R +P D     
Sbjct: 607 SRAEKTFEEMRSSG-LKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTF-- 663

Query: 454 CLIESYLRKGEPADAKTALD-------------------SMIEDGHSPASSLFRSVMESL 494
               +YL  G   +  TA+                    +MI DG     + + SV+  L
Sbjct: 664 ----NYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICL 719

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
                V  A ++   M  KG+  +    A ++  L + G  +E
Sbjct: 720 CHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKE 762



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 92/454 (20%), Positives = 180/454 (39%), Gaps = 82/454 (18%)

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
           LD  + ++++    R +   E E L   MK K++ PT  + + ++  YV     + AL +
Sbjct: 97  LDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALEL 156

Query: 254 FDEMKSFDVK---PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           +    ++D+    P+ +   ALL  L    K+   +KV  EMV+R     + SV      
Sbjct: 157 YH--IAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVC----- 209

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
                                          I++   CK    +   KL++    K  I 
Sbjct: 210 -------------------------------IMVRGLCKERKVEEGRKLINDRWGKGCI- 237

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGN 429
            P          YN ++      G   +A   F++L  KG L     +  +I G  K+ N
Sbjct: 238 -PNIVF------YNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCN 290

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
             +   ++  M  RGV  +   Y  ++++ ++ G   +    L  + E+G  P  + + +
Sbjct: 291 FKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNT 350

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++     DG+V  A  +++  +++G+  N     K+                        
Sbjct: 351 LISGSCRDGKVHEAEELLEHAIKRGLSPN-----KL------------------------ 381

Query: 550 SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
              ++  L+ V  ++GK + A  L      +   +DL +Y  ++  L+AAG+   A ++ 
Sbjct: 382 ---SYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVR 438

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
            K++E+G + D    + L+ GL ++G    A +L
Sbjct: 439 DKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLL 472


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 188/398 (47%), Gaps = 45/398 (11%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+    + G V E+ ++FD+M +LGV  +  +Y AL      RG+  M      +M   G
Sbjct: 44  LVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGG 103

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +EP  +TYN ++  +  + + ++A   F++M  +G+  +VV+YN +I G  R  K+ +A 
Sbjct: 104 VEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAA 163

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +LF  M+ + I P+++++  +I GY    +  +AL  F++MK+  ++P+ VTY  L+ G 
Sbjct: 164 QLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGF 223

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C A  +    +   +M ER + P   +                                 
Sbjct: 224 CRARDIAHAIRAFSDMKERRLAPTKVT--------------------------------- 250

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y ILI  F K    DRA ++L ++         ++ L+++  SY  ++  LC  G+ 
Sbjct: 251 ---YTILIGAFAKENEMDRAFEMLSEM--------EKAGLEVDVQSYGVLLHALCMEGKM 299

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A   F+ +  KGV  + V ++ +I G+ +EG+   A  ++  M + G+  +  +Y   
Sbjct: 300 MHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLT 359

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
           I     +G+  +A+  +  M + G   + S+ R + ++
Sbjct: 360 IRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFDA 397



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 171/366 (46%), Gaps = 14/366 (3%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G +  AR +   MP+ GV  +E  +  LI  Y  +G  +    +   M++ GVE ++ +Y
Sbjct: 52  GDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTY 111

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L     R G +  A+  F++M  +G+     +YN+++ G     KL+ A + FE M+ 
Sbjct: 112 NCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRR 171

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            GI   +VT+N +I+GY +  KM  A   F +MK   ++P+V++Y  +I G+        
Sbjct: 172 EGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAH 231

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A+R F +MK   + P  VTYT L+       +M    ++L EM E+     D   +  LL
Sbjct: 232 AIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEM-EKAGLEVDVQSYGVLL 290

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C  G +  A  + ++M    +      Y ++I  + +     +A++L+ ++      
Sbjct: 291 HALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEM------ 344

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-----LDPVAFNNLIRGH 424
              +S L    +SY   I+ LC+ G+  +AE     +   G+     +  V F+   R H
Sbjct: 345 --RKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFDAKARLH 402

Query: 425 SKEGNP 430
           S   +P
Sbjct: 403 SSTDDP 408



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 133/261 (50%), Gaps = 1/261 (0%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R G+   AR +  +MP KGV  +   + +LI    + G ++++ ++F+ M++ G+  S+ 
Sbjct: 120 RTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMV 179

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +++ L     + G+   A  +FN+M + G++P+  TYN ++ GF  +  +  AIR F DM
Sbjct: 180 TFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDM 239

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           K R ++   VTY  +I  + +  +MD A ++ +EM++  +E  V SY  ++       + 
Sbjct: 240 KERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKM 299

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
             A ++F  M S  VKPN V Y  ++ G    G   +  +++ EM +  + P   S  + 
Sbjct: 300 MHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLT 359

Query: 308 LLGVQCKSGHLNAAADVLKAM 328
           +  + C  G    A  ++  M
Sbjct: 360 IR-LLCNEGKCQEAEALIGDM 379



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/404 (22%), Positives = 171/404 (42%), Gaps = 45/404 (11%)

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V +  AL     + G    A+R F+ M   G+ P   TY  ++ G+F+  + E       
Sbjct: 38  VAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVG 97

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+  G+  ++ TYN ++  + R  +   A  LF EM  K +   V+SY  +I G     
Sbjct: 98  EMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHG 157

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           +  DA ++F+ M+   + P+ VT+  L+ G   AGKM        +M    + P   + +
Sbjct: 158 KLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVT-Y 216

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
            +L+G  C++  +  A      M    +      Y ILI  F K    DRA ++L ++  
Sbjct: 217 NELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEM-- 274

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
                  ++ L+++  SY  ++  LC  G+   A   F+ +  KGV  + V ++ +I G+
Sbjct: 275 ------EKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGY 328

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            +EG+   A  ++  M + G+  +  +Y CL                             
Sbjct: 329 GREGSSYKALRLIMEMRKSGLIPNVASY-CL----------------------------- 358

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
                 +  L  +G+ Q A  ++  M + G++ +  +   + +A
Sbjct: 359 -----TIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFDA 397



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 114/231 (49%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I  L R GKL  A  +   M ++G+      F +LI+ YGK G +  ++  F+ MK  G
Sbjct: 149 LIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAG 208

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++ SV +Y+ L     R      A R F+ M    + PT+ TY +++  F    +++ A 
Sbjct: 209 LQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAF 268

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M+  G+ +DV +Y  +++      KM  A KLF  M  K ++P  + Y  MI GY
Sbjct: 269 EMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGY 328

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
                +  ALR+  EM+   + PN  +Y   +  LC+ GK  E + ++ +M
Sbjct: 329 GREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDM 379



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 157/364 (43%), Gaps = 12/364 (3%)

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           KS   +LDV     +++G  +   + EA ++F  M    + P  ++YT +I GY    + 
Sbjct: 30  KSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQR 89

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           +    +  EM+   V+PN  TY  L+   C  G+    + +  EM  + +     S  + 
Sbjct: 90  EMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNIL 149

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           + G+ C+ G L  AA + +AM R  I      + +LI+ + KA     A+   +++  K 
Sbjct: 150 IAGL-CRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQM--KA 206

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHS 425
             L+P         +YN +I   C       A   F   MK+  L P  V +  LI   +
Sbjct: 207 AGLQPSVV------TYNELIGGFCRARDIAHAIRAFSD-MKERRLAPTKVTYTILIGAFA 259

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
           KE   D AFE++  M + G+  D  +Y  L+ +   +G+   A+    SM   G  P + 
Sbjct: 260 KENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNV 319

Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
           L+  ++     +G    A R++  M + G+  N+      +  L   G  +EA   I  M
Sbjct: 320 LYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDM 379

Query: 546 MQSG 549
             +G
Sbjct: 380 EDAG 383



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 151/370 (40%), Gaps = 14/370 (3%)

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           KS D   +    TAL+ G C +G + E ++V   M    + P + + +  L+      G 
Sbjct: 30  KSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVT-YTALIHGYFVRGQ 88

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                 ++  M R  +      Y  L+  +C+   +  A  L D++  K ++        
Sbjct: 89  REMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVV-------- 140

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEI 436
               SYN +I  LC +G+   A   F  + ++G+    V FN LI G+ K G   +A   
Sbjct: 141 RNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHF 200

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M   G+      Y  LI  + R  + A A  A   M E   +P    +  ++ +  +
Sbjct: 201 FNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAK 260

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
           +  +  A  ++  M + G++ ++     +L AL M G +  A      M   G  PN   
Sbjct: 261 ENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVL 320

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +D ++     +G +  A++L+        I ++ASY   +  L   GK   A +++   M
Sbjct: 321 YDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGD-M 379

Query: 614 EKGGVTDWKS 623
           E  G+   +S
Sbjct: 380 EDAGLQTSES 389



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 101/207 (48%), Gaps = 1/207 (0%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           NL+ +    A    +AL FF  ++ AGL      T+ ++I    R   + HA     DM 
Sbjct: 182 NLLIDGYGKAGKMSNALHFFNQMKAAGL-QPSVVTYNELIGGFCRARDIAHAIRAFSDMK 240

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           ++ +   +  + +LI ++ K+  +  + ++   M++ G+E  V+SY  L   +   G+ M
Sbjct: 241 ERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMM 300

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A++ F  M S+G++P    Y++M++G+        A+R   +M+  G+  +V +Y   I
Sbjct: 301 HARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTI 360

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPT 230
                  K  EAE L  +M++  ++ +
Sbjct: 361 RLLCNEGKCQEAEALIGDMEDAGLQTS 387



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 144/367 (39%), Gaps = 43/367 (11%)

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC A ++     VL    +      D +    L+   C+SG +  A  V   M RL +  
Sbjct: 12  LCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTP 71

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  LI  +      +    L+ ++         +  ++    +YN ++   C  G+
Sbjct: 72  NEVTYTALIHGYFVRGQREMGFALVGEM--------RRGGVEPNLYTYNCLVGEWCRTGE 123

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
              A + F ++  KGV+ + V++N LI G  + G    A ++ + M R G+      +  
Sbjct: 124 FKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNL 183

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI+ Y + G+ ++A    + M   G  P+   +  ++        +  A R    M E+ 
Sbjct: 184 LIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERR 243

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
           +        K+   +L+    +E                 D    +LSE  K  A ++  
Sbjct: 244 LAPT-----KVTYTILIGAFAKE--------------NEMDRAFEMLSEMEK--AGLE-- 280

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS-SDKLIAGLNQ 633
                    +D+ SY  +L AL   GK ++A   LF+ M+  GV       D +I G  +
Sbjct: 281 ---------VDVQSYGVLLHALCMEGKMMHARK-LFQSMDSKGVKPNNVLYDMMIYGYGR 330

Query: 634 EGNTKQA 640
           EG++ +A
Sbjct: 331 EGSSYKA 337



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 8/160 (5%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEH----ALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           K R L P     + Y +L GA   E+    A +    +E+AGL   D +++  ++  L  
Sbjct: 240 KERRLAPT---KVTYTILIGAFAKENEMDRAFEMLSEMEKAGL-EVDVQSYGVLLHALCM 295

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
            GK+ HAR +   M  KGV+ +  +++++I  YG++G   +++++   M++ G+  +V S
Sbjct: 296 EGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVAS 355

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
           Y    +L+   G+   A+     M   G++ +     V+ 
Sbjct: 356 YCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLF 395


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 159/647 (24%), Positives = 270/647 (41%), Gaps = 82/647 (12%)

Query: 13  KIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           K   L P  +   +V   L  AK  + ALQ +  +   G+   D   +   +  L   GK
Sbjct: 216 KCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGV-KPDARGYSSFLIGLCDCGK 274

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
            + A  IL ++ ++ V  +   + ++++   K+  + E+ K+ +   + G    V  Y  
Sbjct: 275 YDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSY 334

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L +   + G  + A  ++  M+S GIE   H  + +L  F        AI +F   K  G
Sbjct: 335 LIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSG 394

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           + LD V YN  ++ Y +   M+EA KL  EMK   + P  I YT +I GY       +A 
Sbjct: 395 LHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQ 454

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           ++F+EM   +++P+ VTY  L  G C +G ++EV  +L  M ++ + P  NS+       
Sbjct: 455 QVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEP--NSL------- 505

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
                                       YGI I  FC+      A  L + + EK I   
Sbjct: 506 ---------------------------TYGIAIVGFCRGGNLSEAEVLFNVVEEKGI--- 535

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP 430
                D     Y+ M+     +G T  A + F ++ ++G ++D  + + LI    + GN 
Sbjct: 536 -----DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNV 590

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
             A  + KIM    V  D  +Y  LI  Y + G+   A      M++ G S    ++  +
Sbjct: 591 QGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTIL 650

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG---------R 541
           M    + GR+Q A ++   M   G+K ++     I   +L+ GH++E L          R
Sbjct: 651 MNGYCKAGRLQEACQLFVQMTNLGIKPDV-----IAYTVLLDGHLKETLQQGWEGIAKER 705

Query: 542 IDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
              ++++    N + LLS  S K   I                D+  Y  ++D    A  
Sbjct: 706 RSFLLRA----NHNKLLS--SMKDMQIEP--------------DVPCYTVLIDGKCKAEY 745

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            + A  +  ++++KG   D  +   LI G   +G   +A D+L  MI
Sbjct: 746 LVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMI 792



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 207/476 (43%), Gaps = 30/476 (6%)

Query: 50  GLFNHDRETHLKMIEIL----GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKG 105
            + +H  ET+  ++  L     ++G  + A    L     G+  D+ ++ + +++Y K G
Sbjct: 354 AMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 413

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
            + E+VK+ + MK  G+      Y  L      +G    A++ F +ML   IEP   TYN
Sbjct: 414 NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYN 473

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
           ++  GF  S  +       + M  +G+  + +TY   I G+ R   + EAE LF  ++EK
Sbjct: 474 ILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEK 533

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I+   + Y++M+ GY+     D A  +F  +       +  + + L+  LC  G +   
Sbjct: 534 GIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGA 593

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
             V + M+E  + P D   + KL+ + C++G ++ A      M++  +  +   Y IL+ 
Sbjct: 594 SNVCKIMLEHDVVP-DVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMN 652

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ-HLCHNGQTG------- 397
            +CKA     A +L  ++    I  +P      +  +Y  ++  HL    Q G       
Sbjct: 653 GYCKAGRLQEACQLFVQMTNLGI--KP------DVIAYTVLLDGHLKETLQQGWEGIAKE 704

Query: 398 KAEIFFR-------QLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           +     R         MK   ++P    +  LI G  K      A E+   M ++G+  D
Sbjct: 705 RRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPD 764

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           A AY  LI  Y  +GE + A+  L  MI+ G  P    F  + +S     ++Q  +
Sbjct: 765 AYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQFCA 820



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 17/283 (6%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N   A   F  VE  G+ +H    +  M+      G  +HA  + + + ++G   D    
Sbjct: 519 NLSEAEVLFNVVEEKGI-DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC 577

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             LI    + G VQ +  +  IM +  V   V SY  L  +  + G    A  +F+ M+ 
Sbjct: 578 SKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQ 637

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY-------- 206
            G+      Y +++ G+  + +L+ A + F  M + GI  DV+ Y  +++G+        
Sbjct: 638 RGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQG 697

Query: 207 --------NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
                     F       KL + MK+  IEP V  YT +I G    E   +A  +FDEM 
Sbjct: 698 WEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEML 757

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              + P+A  YTAL+ G C  G++ + + +L+EM+++ I P +
Sbjct: 758 QKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDE 800



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 117/551 (21%), Positives = 208/551 (37%), Gaps = 116/551 (21%)

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM----------------- 222
           A  +F+D +S G + D  TY+ MI   +  ++      LF+E+                 
Sbjct: 83  AFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSSSNASGPEILPLVDH 142

Query: 223 -KEKNIEPTVISYT--TMIKGYVAVERADDALRIF------------------------- 254
            +     P  +S+    +IK  +        + +F                         
Sbjct: 143 HRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAET 202

Query: 255 ----------DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
                     +EMK F + P+  T+  +   L  A K+ E  +V  EM E  + P     
Sbjct: 203 GEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGY 262

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
              L+G+ C  G  + A  +L+ + R  +P EA  Y ++++  CK    D A KLL+   
Sbjct: 263 SSFLIGL-CDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKA 321

Query: 365 EK---------EIILRPQS---TLDMEASSYNPMIQH----LCHN-----------GQTG 397
            +           ++R       L      Y  M+ H     CH            G T 
Sbjct: 322 RQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTS 381

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A  +F +    G+ LD V +N  +  + K GN + A +++  M   G+  D   Y CLI
Sbjct: 382 EAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLI 441

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
             Y  KGE  +A+   + M++    P    +  +     + G V     ++  M ++G++
Sbjct: 442 SGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLE 501

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDF 576
            N  L   I      RG               G++   + L +V+ EKG  I  ++++  
Sbjct: 502 PN-SLTYGIAIVGFCRG---------------GNLSEAEVLFNVVEEKG--IDHIEVM-- 541

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
                       Y  ++   L +G T +AY +  ++  +G + D  S  KLI  L + GN
Sbjct: 542 ------------YSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGN 589

Query: 637 TKQADILSRMI 647
            + A  + +++
Sbjct: 590 VQGASNVCKIM 600


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 229/477 (48%), Gaps = 27/477 (5%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M   G   + VT+N ++NG+++  +  + E+L   M  ++I+P V+SY  +++G   +ER
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 247 ADDALRIFDEMKSFDVK--PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
             +A  +  +M S   +  P+ VTY+ LL G C AGK+ E +++L+E++ R + P D  +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP-DALM 119

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           + K++   CKS  L  A ++L+ MIR         +  LI   C+ +  + A  LL K+ 
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
                    S +  +  +YN ++  LC  G+  +AE    ++   G   D VA+++ + G
Sbjct: 180 --------ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYG 231

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K G    A ++++ M       +   Y  +++   + G+     TAL+ M +   S  
Sbjct: 232 LCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGK---IDTALEMMEQMASSDG 288

Query: 484 SSL----FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             L    + +V++ L + GR Q A  VM++M   G + ++   + ++  L   G +EEA+
Sbjct: 289 CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAV 348

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD-----FCLGRDCIIDLASYEK 591
             +  M   G  PN   + SL+  L   G+   A ++++        G  C   +++Y  
Sbjct: 349 EAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNA 408

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           ++  L  AG+  +A     ++  +G   D  S   ++ GL + G   QA+++   +R
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 219/470 (46%), Gaps = 23/470 (4%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G  P   T+N ++ GF    +     R  E M +R I  +VV+YN ++ G  + ++  EA
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 216 EKLFAEMKEKN--IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           E+L  +M  +     P +++Y+T++ GY    + +++  +  E+ S  ++P+A+ YT ++
Sbjct: 65  EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC + ++ E  ++L EM+     P   + F  L+   C+  +L  A  +L+ M    +
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLIT-FNTLISGCCREKNLEMADSLLQKMAASGV 183

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y  L++  CKA     A +LL+++          S    +  +Y+  +  LC +
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERM--------KASGCAPDVVAYSSFVYGLCKS 235

Query: 394 GQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRR-GVPRDAD 450
           G+   A     Q M+    DP  V +N ++ G  K G  D+A E+++ M    G   +  
Sbjct: 236 GKVLDAHQVLEQ-MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  +++   + G   +A++ +++M   G  P    + S++  L + G+++ A   ++ M
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--------SVPNFDSLLSVLS 562
             +G K N      ++  L   G + EA   ++ M   G        SV  +++L+  L 
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLC 414

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
           + G+   A+K       + C  D  SY  +++ L  +G+ L A  IL ++
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 188/419 (44%), Gaps = 16/419 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQ 119
           ++E L ++ + + A  ++ DM  +G +   DM  +  L+  Y K G V+ES ++   +  
Sbjct: 51  LLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVIS 110

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G+      Y  +   + +  R   A     +M+  G  PT  T+N ++ G      LE 
Sbjct: 111 RGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEM 170

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A    + M + G+  DVVTYNT+++G  +  ++ EAE+L   MK     P V++Y++ + 
Sbjct: 171 ADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G     +  DA ++ ++M+     PN VTY  +L GLC +GK+    +++ +M       
Sbjct: 231 GLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG 290

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            +   +  ++   CK G    A  V++AM R     +   Y  L+   CKA   + A++ 
Sbjct: 291 LNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA--- 416
           + ++  +    +P       A +Y  ++  LC  G+  +AE    ++   G         
Sbjct: 351 VREMAMEGC--KPN------AVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPS 402

Query: 417 ---FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
              +N LI G  K G  D A +  + M  +G   D  +Y  ++E   R G    A+  L
Sbjct: 403 VSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 211/465 (45%), Gaps = 16/465 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G   +   F  L+  + K+G   +  ++ + M    ++ +V SY+ L + + +  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 142 YMMAKRYFNKMLSEG--IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           +  A+     M+S G    P   TY+ +L G+  + K+E +    +++ SRG+  D + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
             ++    +  ++ EA +L  EM      PT+I++ T+I G    +  + A  +  +M +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             VK + VTY  L+ GLC AG++ E +++L  M      P D   +   +   CKSG + 
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP-DVVAYSSFVYGLCKSGKVL 239

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  VL+ M           Y  +++  CK+   D A+++++++   +          + 
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD-------GCGLN 292

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              Y+ ++  LC  G+T +A      + + G   D V +++L+ G  K G  + A E V+
Sbjct: 293 VVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR 352

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS-----PASSLFRSVMES 493
            M   G   +A  Y  L+      G  A+A+  ++ M   G       P+ S + +++  
Sbjct: 353 EMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGG 412

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           L + GR+  A +  + M  +G   +    + I+E L   G   +A
Sbjct: 413 LCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 187/388 (48%), Gaps = 12/388 (3%)

Query: 46  VERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKG 105
           + R G    D  T+  ++    + GK+  +R +L ++  +G++ D  M+  ++ S  K  
Sbjct: 72  ISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSA 131

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
            + E++++ + M + G   ++ +++ L     R     MA     KM + G++    TYN
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYN 191

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
            ++ G   + +L+ A +  E MK+ G + DVV Y++ + G  +  K+ +A ++  +M++ 
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDS 251

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVE 284
           + +P V++Y T++ G     + D AL + ++M S D    N V Y+ ++ GLC  G+  E
Sbjct: 252 HHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            + V+  M      P D   +  L+   CK+G +  A + ++ M        A  Y  L+
Sbjct: 312 ARSVMEAMARAGCRP-DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILR--PQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
              C       A ++++++          P S      S+YN +I  LC  G+   A  F
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSV-----STYNALIGGLCKAGRIDDALKF 425

Query: 403 FRQLMKKGVLDP--VAFNNLIRGHSKEG 428
           F+++  +G  DP  V+++ ++ G ++ G
Sbjct: 426 FQRMRSQGC-DPDGVSYSTIVEGLARSG 452



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 150/332 (45%), Gaps = 25/332 (7%)

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M R   P  +  +  L+  F K        +LL+ +  ++I  +P         SYN ++
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDI--QPNVV------SYNGLL 52

Query: 388 QHLCHNGQTGKAEIFFRQLMKKG---VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           + LC   +  +AE   R ++ +G     D V ++ L+ G+ K G  + + E++K +  RG
Sbjct: 53  EGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRG 112

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +  DA  Y  ++ S  +     +A   L+ MI  G  P    F +++     +  ++ A 
Sbjct: 113 LRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMAD 172

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
            +++ M   GVK ++     +++ L   G ++EA   ++ M  SG  P+   + S +  L
Sbjct: 173 SLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGL 232

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
            + GK + A ++L+         ++ +Y  +LD L  +GK   A     ++ME+      
Sbjct: 233 CKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTA----LEMMEQ-----M 283

Query: 622 KSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
            SSD    GLN  G +   D L ++ R + +R
Sbjct: 284 ASSDG--CGLNVVGYSTVVDGLCKLGRTQEAR 313



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 88/167 (52%), Gaps = 5/167 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +++ L ++G+   AR ++  M + G + D   +  L+    K G ++E+V+    M   G
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-----IEPTRHTYNVMLWGFFLSLK 176
            + +  +Y +L   +   GR   A+R   +M S G       P+  TYN ++ G   + +
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGR 418

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMK 223
           ++ A++FF+ M+S+G   D V+Y+T++ G  R  +  +AE + +E++
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465


>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/562 (23%), Positives = 229/562 (40%), Gaps = 47/562 (8%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L  + D  LV  +L         +QFF+W  +   F HD  T++ +I  
Sbjct: 68  WGPDAEKALEVLKLKVDPRLVREILKIDVEVSVKIQFFKWAGKRRNFEHDSTTYMALIRC 127

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L            + DM K            ++   GK  +V  ++ +F  +K      +
Sbjct: 128 LDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQVKGRKCRPT 187

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
             +Y+++  ++++ G +      +N+M SE    P   TY+ ++  F    + ++AIR F
Sbjct: 188 ASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLF 247

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           ++MK  G+      Y T++  Y +  K++EA  L  EM+ +    TV +YT +I+G    
Sbjct: 248 DEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKS 307

Query: 245 ERAD-----------------------------------DALRIFDEMKSFDVKPNAVTY 269
            R +                                   DA+++FDEMK  +  PN VTY
Sbjct: 308 GRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTY 367

Query: 270 TALLPGLCDA-GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
             ++  L +A   + E       M +  I P  +  +  L+   CK+  +  A  +L+ M
Sbjct: 368 NTIIKSLFEAKAPLSEASSWFERMKKDGIVP-SSFTYSILIDGYCKTNRVEKALLLLEEM 426

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
                P     Y  LI     A+ YD A +L  +L E        +     A  Y  MI+
Sbjct: 427 DEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKE--------NCGCSSARVYAVMIK 478

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
           H    G+  +A   F ++ K G   D  A+N L+ G  +    D AF + + M   G   
Sbjct: 479 HFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTP 538

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D +++  ++    R G P  A      M      P    F +++  L   G  + A+++M
Sbjct: 539 DINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLM 598

Query: 508 KSMVEKGVKENLDLVAKILEAL 529
           + M  KG + +L   + ILEA+
Sbjct: 599 QEMSSKGFQYDLITYSSILEAV 620



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 121/247 (48%), Gaps = 7/247 (2%)

Query: 5   AWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
           +W  R++     +VP  F ++++ +        E AL     ++  G F      +  +I
Sbjct: 386 SWFERMKKD--GIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKG-FPPCPAAYCSLI 442

Query: 64  EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
             LG   + + A  +  ++ +        ++ V+I+ +GK G + E++ +F+ MK+LG  
Sbjct: 443 NTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCT 502

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
             V +Y+AL   ++R  R   A   F  M   G  P  +++N++L G   +   + A+  
Sbjct: 503 PDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEM 562

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F  MK+  I  DVV++NT++   +R    +EA KL  EM  K  +  +I+Y+++++   A
Sbjct: 563 FTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILE---A 619

Query: 244 VERADDA 250
           V + DD 
Sbjct: 620 VGKVDDC 626



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 94/475 (19%), Positives = 195/475 (41%), Gaps = 16/475 (3%)

Query: 173 LSLKLETAIRFFE-DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
           + +++   I+FF+   K R    D  TY  +I   +  +   E  K   +M + +     
Sbjct: 94  IDVEVSVKIQFFKWAGKRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAP 153

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
              + +++     +  + AL +F ++K    +P A TY +++  L   G   +V ++  E
Sbjct: 154 AELSEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNE 213

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M        D   +  L+    K    ++A  +   M    +   A  Y  L+  + K  
Sbjct: 214 MCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVG 273

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
             + A+ L+ ++  +  +L           +Y  +I+ L  +G+   A + ++ ++K G 
Sbjct: 274 KVEEALGLVKEMRARRCLL--------TVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGC 325

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP-ADAK 469
             D V  NNLI    +  +   A ++   M       +   Y  +I+S      P ++A 
Sbjct: 326 KPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEAS 385

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
           +  + M +DG  P+S  +  +++   +  RV+ A  +++ M EKG          ++  L
Sbjct: 386 SWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTL 445

Query: 530 LMRGHVE---EALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
            +    +   E    +       S   +  ++    + G+   A+ L +      C  D+
Sbjct: 446 GVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDV 505

Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGLNQEGNTKQA 640
            +Y  ++  ++ A +   A+S LF+ ME+ G T D  S + ++ GL + G  K A
Sbjct: 506 YAYNALMTGMVRAERMDEAFS-LFRTMEENGCTPDINSHNIILNGLARTGGPKGA 559


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 159/647 (24%), Positives = 270/647 (41%), Gaps = 82/647 (12%)

Query: 13  KIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           K   L P  +   +V   L  AK  + ALQ +  +   G+   D   +   +  L   GK
Sbjct: 334 KCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGV-KPDARGYSSFLIGLCDCGK 392

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
            + A  IL ++ ++ V  +   + ++++   K+  + E+ K+ +   + G    V  Y  
Sbjct: 393 YDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSY 452

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L +   + G  + A  ++  M+S GIE   H  + +L  F        AI +F   K  G
Sbjct: 453 LIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSG 512

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           + LD V YN  ++ Y +   M+EA KL  EMK   + P  I YT +I GY       +A 
Sbjct: 513 LHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQ 572

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
           ++F+EM   +++P+ VTY  L  G C +G ++EV  +L  M ++ + P  NS+       
Sbjct: 573 QVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEP--NSL------- 623

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
                                       YGI I  FC+      A  L + + EK I   
Sbjct: 624 ---------------------------TYGIAIVGFCRGGNLSEAEVLFNVVEEKGI--- 653

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNP 430
                D     Y+ M+     +G T  A + F ++ ++G ++D  + + LI    + GN 
Sbjct: 654 -----DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNV 708

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
             A  + KIM    V  D  +Y  LI  Y + G+   A      M++ G S    ++  +
Sbjct: 709 QGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTIL 768

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG---------R 541
           M    + GR+Q A ++   M   G+K ++     I   +L+ GH++E L          R
Sbjct: 769 MNGYCKAGRLQEACQLFVQMTNLGIKPDV-----IAYTVLLDGHLKETLQQGWEGIAKER 823

Query: 542 IDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
              ++++    N + LLS  S K   I                D+  Y  ++D    A  
Sbjct: 824 RSFLLRA----NHNKLLS--SMKDMQIEP--------------DVPCYTVLIDGKCKAEY 863

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            + A  +  ++++KG   D  +   LI G   +G   +A D+L  MI
Sbjct: 864 LVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMI 910



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 206/473 (43%), Gaps = 30/473 (6%)

Query: 50  GLFNHDRETHLKMIEIL----GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKG 105
            + +H  ET+  ++  L     ++G  + A    L     G+  D+ ++ + +++Y K G
Sbjct: 472 AMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 531

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
            + E+VK+ + MK  G+      Y  L      +G    A++ F +ML   IEP   TYN
Sbjct: 532 NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYN 591

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
           ++  GF  S  +       + M  +G+  + +TY   I G+ R   + EAE LF  ++EK
Sbjct: 592 ILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEK 651

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I+   + Y++M+ GY+     D A  +F  +       +  + + L+  LC  G +   
Sbjct: 652 GIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGA 711

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
             V + M+E  + P D   + KL+ + C++G ++ A      M++  +  +   Y IL+ 
Sbjct: 712 SNVCKIMLEHDVVP-DVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMN 770

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ-HLCHNGQTG------- 397
            +CKA     A +L  ++    I  +P      +  +Y  ++  HL    Q G       
Sbjct: 771 GYCKAGRLQEACQLFVQMTNLGI--KP------DVIAYTVLLDGHLKETLQQGWEGIAKE 822

Query: 398 KAEIFFR-------QLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           +     R         MK   ++P    +  LI G  K      A E+   M ++G+  D
Sbjct: 823 RRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPD 882

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           A AY  LI  Y  +GE + A+  L  MI+ G  P    F  + +S     ++Q
Sbjct: 883 AYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 935



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 17/283 (6%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N   A   F  VE  G+ +H    +  M+      G  +HA  + + + ++G   D    
Sbjct: 637 NLSEAEVLFNVVEEKGI-DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC 695

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
             LI    + G VQ +  +  IM +  V   V SY  L  +  + G    A  +F+ M+ 
Sbjct: 696 SKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQ 755

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY-------- 206
            G+      Y +++ G+  + +L+ A + F  M + GI  DV+ Y  +++G+        
Sbjct: 756 RGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQG 815

Query: 207 --------NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
                     F       KL + MK+  IEP V  YT +I G    E   +A  +FDEM 
Sbjct: 816 WEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEML 875

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              + P+A  YTAL+ G C  G++ + + +L+EM+++ I P +
Sbjct: 876 QKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDE 918



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 117/551 (21%), Positives = 208/551 (37%), Gaps = 116/551 (21%)

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM----------------- 222
           A  +F+D +S G + D  TY+ MI   +  ++      LF+E+                 
Sbjct: 201 AFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSSSNASGPEILPLVDH 260

Query: 223 -KEKNIEPTVISYT--TMIKGYVAVERADDALRIF------------------------- 254
            +     P  +S+    +IK  +        + +F                         
Sbjct: 261 HRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAET 320

Query: 255 ----------DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
                     +EMK F + P+  T+  +   L  A K+ E  +V  EM E  + P     
Sbjct: 321 GEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGY 380

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
              L+G+ C  G  + A  +L+ + R  +P EA  Y ++++  CK    D A KLL+   
Sbjct: 381 SSFLIGL-CDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKA 439

Query: 365 EK---------EIILRPQS---TLDMEASSYNPMIQH----LCHN-----------GQTG 397
            +           ++R       L      Y  M+ H     CH            G T 
Sbjct: 440 RQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTS 499

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A  +F +    G+ LD V +N  +  + K GN + A +++  M   G+  D   Y CLI
Sbjct: 500 EAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLI 559

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
             Y  KGE  +A+   + M++    P    +  +     + G V     ++  M ++G++
Sbjct: 560 SGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLE 619

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDF 576
            N  L   I      RG               G++   + L +V+ EKG  I  ++++  
Sbjct: 620 PN-SLTYGIAIVGFCRG---------------GNLSEAEVLFNVVEEKG--IDHIEVM-- 659

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
                       Y  ++   L +G T +AY +  ++  +G + D  S  KLI  L + GN
Sbjct: 660 ------------YSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGN 707

Query: 637 TKQADILSRMI 647
            + A  + +++
Sbjct: 708 VQGASNVCKIM 718


>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
          Length = 905

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/499 (22%), Positives = 224/499 (44%), Gaps = 16/499 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI    + G  +HAR    +M  +G++ +  +F  L+ +Y     ++ ++   + MK  G
Sbjct: 303 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEG 362

Query: 122 VERSVKSYDALFKLILR------RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           +E ++ +Y  L     +       G    A+    +M  +GI+     Y+ M+ G+ +  
Sbjct: 363 LELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQ 422

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
                +  FE +K  G    +++Y  ++N Y +  K+ +A  +  EM+   I+    +Y+
Sbjct: 423 NENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYS 482

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +I G++ +    +A  IF+EM    ++P+   Y  L+   C  G M     +L +M + 
Sbjct: 483 MLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKE 542

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            + P  N  F  ++     +G + +A D L  M R         Y  LI    +     R
Sbjct: 543 RMQP-SNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 601

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A+ +LDK+          + +     +Y  +++    +G  GKA  +F ++ + G+ LD 
Sbjct: 602 AVSVLDKM--------SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDV 653

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             +  L+R   K G   SA  + + M  + +PR+   Y  LI+ + R+G+  +A+  +  
Sbjct: 654 YIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQ 713

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M EDG  P    + S + +  + G +Q A +V++ MV+ G+K N+     +++       
Sbjct: 714 MKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSL 773

Query: 535 VEEALGRIDLMMQSGSVPN 553
            + AL   + M  +G  P+
Sbjct: 774 PDRALKCFEEMKLAGLKPD 792



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 1/262 (0%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
           +A   F  + R+GL   DR  +  +IE   ++G ++ A CIL  M K+ +Q     F  +
Sbjct: 496 NAFAIFEEMLRSGL-QPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPI 554

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           IE Y   G ++ ++   D+M++ G   +V +Y+AL   ++R+ +   A    +KM   GI
Sbjct: 555 IEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGI 614

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
            P  HTY +++ G+  S  +  A  +F  +K  G+ LDV  Y T++    +  +M  A  
Sbjct: 615 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 674

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           +  EM  + I      Y  +I G+       +A  +  +MK   V PN  TYT+ +   C
Sbjct: 675 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC 734

Query: 278 DAGKMVEVQKVLREMVERYIPP 299
            AG M   +KV+ EMV+  + P
Sbjct: 735 KAGDMQRAEKVIEEMVDVGLKP 756



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 184/439 (41%), Gaps = 49/439 (11%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK---IFDIMKQLGVERSV 126
           G +  A  ++ +M + G+    D++  ++  Y    I+Q   K   +F+ +K+ G + S+
Sbjct: 387 GNMERAEELVREMEEDGIDAPIDVYHSMMHGYT---IIQNENKCLVVFERLKECGFKPSI 443

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
            SY  L  L ++ G+   A     +M S GI+    TY++++ GF        A   FE+
Sbjct: 444 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 503

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M   G+  D   YN +I  + +   MD A  +  +M+++ ++P+  ++  +I+GY     
Sbjct: 504 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 563

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS--- 303
              AL   D M+     P  +TY AL+ GL    K+     VL +M    I P +++   
Sbjct: 564 MKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTI 623

Query: 304 -------------------------------VFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
                                          ++  LL   CKSG + +A  V + M    
Sbjct: 624 IMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQK 683

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           IP     Y ILI+ + +      A  L+ ++ E  +   P +       +Y   I   C 
Sbjct: 684 IPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGV---PPNI-----HTYTSYINACCK 735

Query: 393 NGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G   +AE    +++  G+   V  +  LI+G ++   PD A +  + M   G+  D  +
Sbjct: 736 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 795

Query: 452 YICLIESYLRKGEPADAKT 470
           Y CL+ S L +    +  T
Sbjct: 796 YHCLVTSLLSRATVMEGST 814



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 155/325 (47%), Gaps = 2/325 (0%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL   + +E  G+  H+ +T+  +I     +    +A  I  +M + G+Q D  ++ +LI
Sbjct: 462 ALSISKEMESCGI-KHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLI 520

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           E++ K G +  ++ I + M++  ++ S +++  + +     G    A    + M   G  
Sbjct: 521 EAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCV 580

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT  TYN ++ G     K++ A+   + M   GI+ +  TY  ++ GY     + +A + 
Sbjct: 581 PTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEY 640

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F ++KE  ++  V  Y T+++      R   AL +  EM    +  N   Y  L+ G   
Sbjct: 641 FTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWAR 700

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G + E + ++++M E  +PP  ++ +   +   CK+G +  A  V++ M+ + +     
Sbjct: 701 RGDVWEAEDLMKQMKEDGVPPNIHT-YTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVK 759

Query: 339 HYGILIENFCKAEMYDRAIKLLDKL 363
            Y  LI+ + +  + DRA+K  +++
Sbjct: 760 TYTTLIKGWARVSLPDRALKCFEEM 784



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 6/243 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L R  K+  A  +L  M   G+  +E  + +++  Y   G + ++ + F  +
Sbjct: 585 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI 644

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+ G++  V  Y+ L +   + GR   A     +M  + I      YN+++ G+     +
Sbjct: 645 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 704

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A    + MK  G+  ++ TY + IN   +   M  AEK+  EM +  ++P V +YTT+
Sbjct: 705 WEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTL 764

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE------VQKVLRE 291
           IKG+  V   D AL+ F+EMK   +KP+  +Y  L+  L     ++E      +  V RE
Sbjct: 765 IKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCRE 824

Query: 292 MVE 294
           M E
Sbjct: 825 MSE 827


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/488 (22%), Positives = 206/488 (42%), Gaps = 13/488 (2%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G+  +     VLI S+     V  +  +   + +LG +    S+  L K +   G+
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F+KM+ EG +P    Y  ++ G   +     AIR    M+      DVV Y T
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+   + ++  +A  LF+EM  K I P +++  +++     +        + +EM    
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + PNA++ T ++  LC  G + +   V+  M +  + P D   +  L+   C    ++ A
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEP-DVVTYTALIDGHCLRSEMDEA 338

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             V   M+          Y  LI  +CK E  D+A+ L +++  +++I  P +       
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI--PNTV------ 390

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +YN +I  LCH G+   A   FR+++  G + D V +  L+    K  + D A  ++K +
Sbjct: 391 TYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAI 450

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
               +  D   Y  +I+   R GE  DA+    ++   G  P    +  +   L + G +
Sbjct: 451 EGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLL 510

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSL 557
             A+++   M E     +      I +  L       A+  ++ M+  G    V     L
Sbjct: 511 DEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLL 570

Query: 558 LSVLSEKG 565
           + +LS+ G
Sbjct: 571 VGMLSDDG 578



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 207/477 (43%), Gaps = 15/477 (3%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M   G+  +V + + L        R   A     K+L  G +P   ++  ++ G  L  +
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +  A+  F+ M   G   DVV Y T+ING  +      A +L   M++ N +P V+ Y T
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I       +   A  +F EM +  + PN VT  +L+  LC+ G+   V  +L EMV+  
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P   S+   ++   CK G +  A DV+  M +  +  +   Y  LI+  C     D A
Sbjct: 280 IMPNAISL-TTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           +K+ D +V K     P         SYN +I   C   +  KA   F ++ ++ ++ + V
Sbjct: 339 VKVFDMMVHKGC--APN------VFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTV 390

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N LI G    G    A  + + M   G   D   Y  L++ YL K    D   AL   
Sbjct: 391 TYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLD-YLCKNCHLDKAMALLKA 449

Query: 476 IEDGH-SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           IE  +  P   ++  V++ +   G ++ A  +  ++  KG+K N+     +   L  RG 
Sbjct: 450 IEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGL 509

Query: 535 VEEA---LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
           ++EA      +D    S     ++++        +T  A++LL+  L R    D+++
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVST 566



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 196/473 (41%), Gaps = 46/473 (9%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL  F  +   G F  D   +  +I  L + G  + A  +L  M K   Q D  ++  LI
Sbjct: 163 ALHLFDKMIWEG-FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            S  K     ++  +F  M   G+  ++ + ++L   +   G +       N+M+   I 
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIM 281

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   +   ++        +  A    + M   G+  DVVTY  +I+G+    +MDEA K+
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M  K   P V SY T+I GY  +ER D A+ +F+EM    + PN VTY  L+ GLC 
Sbjct: 342 FDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCH 401

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G++ +   + REM                  V C                   IP +  
Sbjct: 402 VGRLQDAIALFREM------------------VACGQ-----------------IP-DLV 425

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y IL++  CK    D+A+ LL K +E        S LD +   Y  +I  +C  G+   
Sbjct: 426 TYRILLDYLCKNCHLDKAMALL-KAIEG-------SNLDPDIQIYTIVIDGMCRAGELED 477

Query: 399 AEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A   F  L  KG+   V  +N +  G  K G  D A ++   M       D   Y  + +
Sbjct: 478 ARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQ 537

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            +LR  E + A   L+ M+  G S   S    ++  L +DG  Q+ +  ++ M
Sbjct: 538 GFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDM 590



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/542 (21%), Positives = 221/542 (40%), Gaps = 19/542 (3%)

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
           Y     + +++  F+ M  +    S+  +  +   I +  RY        KM S GI   
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 161 RHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
            +T NV++  F    ++  A      +   G   D  ++ T+I G     ++ EA  LF 
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           +M  +  +P V+ Y T+I G         A+R+   M+  + +P+ V Y  L+  LC   
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228

Query: 281 KMVEVQKVLREMVERYIPPK---DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
           +  +   +  EM+ + I P     NS+   L    C  G       +L  M+   I   A
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYAL----CNLGEWKHVNTLLNEMVDSKIMPNA 284

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
                +++  CK  M  +A  ++D +         QS ++ +  +Y  +I   C   +  
Sbjct: 285 ISLTTVVDALCKEGMVAQAHDVVDMMF--------QSGVEPDVVTYTALIDGHCLRSEMD 336

Query: 398 KAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A   F  ++ KG    V ++N LI G+ K    D A  + + M R+ +  +   Y  LI
Sbjct: 337 EAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLI 396

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
                 G   DA      M+  G  P    +R +++ L ++  +  A  ++K++    + 
Sbjct: 397 HGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLD 456

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            ++ +   +++ +   G +E+A      +   G  PN   ++ +   L ++G    A KL
Sbjct: 457 PDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKL 516

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                   C  D  +Y  +    L   +T  A  +L +++ +G   D  ++  L+  L+ 
Sbjct: 517 FMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSD 576

Query: 634 EG 635
           +G
Sbjct: 577 DG 578



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 97/481 (20%), Positives = 199/481 (41%), Gaps = 48/481 (9%)

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           +N   + Y  F  +D+A   F  M   +  P+++ +  ++     V+R    L +  +M 
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 259 SFDV-----------------------------------KPNAVTYTALLPGLCDAGKMV 283
           SF +                                   +P+  ++T L+ GLC  G++ 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E   +  +M+     P D  ++  L+   CK+GH +AA  +L++M + +   +   YG L
Sbjct: 162 EALHLFDKMIWEGFQP-DVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTL 220

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I + CK     +A  L  +++ K I   P         + N ++  LC+ G+        
Sbjct: 221 IHSLCKDRQQTQAFNLFSEMITKGI--SPNIV------TCNSLVYALCNLGEWKHVNTLL 272

Query: 404 RQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
            +++   ++ + ++   ++    KEG    A ++V +M + GV  D   Y  LI+ +  +
Sbjct: 273 NEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLR 332

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
            E  +A    D M+  G +P    + +++    +  R+  A  + + M  + +  N    
Sbjct: 333 SEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTY 392

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLG 579
             ++  L   G +++A+     M+  G +P+  +   LL  L +      A+ LL    G
Sbjct: 393 NTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEG 452

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
            +   D+  Y  V+D +  AG+  +A  +   +  KG   +  + + +  GL + G   +
Sbjct: 453 SNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDE 512

Query: 640 A 640
           A
Sbjct: 513 A 513



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 118/279 (42%), Gaps = 18/279 (6%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           ++ +++ A  +  +M ++ +  +   +  LI      G +Q+++ +F  M   G    + 
Sbjct: 366 KIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLV 425

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y  L   + +      A      +    ++P    Y +++ G   + +LE A   F ++
Sbjct: 426 TYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNL 485

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            S+G+  +V TYN M +G  +   +DEA KLF EM E        +Y T+ +G++     
Sbjct: 486 SSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNET 545

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
             A+++ +EM +     +  T T L+  L D G        L +M         ++VF  
Sbjct: 546 SRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDTVF-- 603

Query: 308 LLGVQCKSGHLNAAADVL-----------KAMIRLSIPT 335
                CK   +NA   V+           + MI LS P+
Sbjct: 604 -----CKEDDINALGKVISDLNDWLEELEEDMIFLSTPS 637



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 6/245 (2%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N + N     +  + A+  F  + R  L   +  T+  +I  L  VG+L  A  +  
Sbjct: 355 FSYNTLINGYCKIERMDKAMYLFEEMCRQKLIP-NTVTYNTLIHGLCHVGRLQDAIALFR 413

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G   D   + +L++   K   + +++ +   ++   ++  ++ Y  +   + R G
Sbjct: 414 EMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAG 473

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A+  F+ + S+G++P   TYN+M  G      L+ A + F +M     S D  TYN
Sbjct: 474 ELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYN 533

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+  G+ R  +   A +L  EM  +     V S TT++ G +    +DD L   +  K  
Sbjct: 534 TITQGFLRNNETSRAIQLLEEMLARGFSCDV-STTTLLVGML----SDDGLDQSEAHKLE 588

Query: 261 DVKPN 265
           D+ P+
Sbjct: 589 DMFPH 593


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/483 (22%), Positives = 209/483 (43%), Gaps = 12/483 (2%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++ ++G+ G + E+  +   M+  G+   V++ + + ++ L  G ++ A++ F+ M   G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P    +  ++       K+E        M   G SLD  T   ++       +  +  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           + F  M E    P V++YT  I G         A  + +EM    +KPN  T+T L+ GL
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  G      ++  ++++      +   +  ++G  C+ G L  A  +L  M+   +   
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI   CK   +DRA +L++K+ ++  +  P         +YN +I   C  G+ 
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL--PN------IYTYNAVIDGFCKKGKI 300

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A    R    +G+  D + +  LI  H K+G+   A ++   M   G   D +AY  L
Sbjct: 301 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 360

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I +Y ++ +  +++   D  +  G  P    + S++    + GR   A RV + MV+ G 
Sbjct: 361 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 420

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE---KGKTIAAVK 572
             +      ++  L     +EEA    + M+    VP   + +++  E   + KT  AV 
Sbjct: 421 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVS 480

Query: 573 LLD 575
           +LD
Sbjct: 481 VLD 483



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 197/441 (44%), Gaps = 14/441 (3%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
           +A + F  + RAG+   +R     ++ +  R GK+     +L  M + G   D     V+
Sbjct: 56  YARKVFDGMTRAGVSPMNRGFG-ALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVV 114

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           + S  +KG  ++  + F  M + G   +V +Y A    + +R     A     +M+  G+
Sbjct: 115 VRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGL 174

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +P  +T+  ++ G       E A R F  + KS     +V TY  MI GY R  K+  AE
Sbjct: 175 KPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAE 234

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L   M E+ ++P   +YTT+I G+      D A  + ++MK     PN  TY A++ G 
Sbjct: 235 MLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGF 294

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  GK+ E  KVLR    + +   D   +  L+   CK GH+  A D+   M+      +
Sbjct: 295 CKKGKIQEAYKVLRMATSQGLKF-DKITYTILITEHCKQGHITYALDLFDRMVENGCCPD 353

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI  +C+    + + K  DK +   ++   Q        +Y  MI   C  G++
Sbjct: 354 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQ--------TYTSMIAGYCKVGRS 405

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK-IMGRRGVPRDADAYIC 454
             A   F ++++ G   D + +  LI G  KE   + A  + + ++ +R VP +    + 
Sbjct: 406 TLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEV-TRVT 464

Query: 455 LIESYLRKGEPADAKTALDSM 475
           L   Y R+ + + A + LD +
Sbjct: 465 LTFEYCRREKTSIAVSVLDRL 485



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 145/286 (50%), Gaps = 1/286 (0%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L P  + H  + + L     +E A + F  + ++  +  +  T+  MI    R GKL 
Sbjct: 172 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 231

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +L+ M ++G++ + + +  LI  + K G    + ++ + MKQ G   ++ +Y+A+ 
Sbjct: 232 RAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVI 291

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
               ++G+   A +      S+G++  + TY +++        +  A+  F+ M   G  
Sbjct: 292 DGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCC 351

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            D+  Y ++I+ Y + ++M+E++K F +     + PT  +YT+MI GY  V R+  ALR+
Sbjct: 352 PDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRV 411

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           F+ M       +++TY AL+ GLC   ++ E + +   M+++ + P
Sbjct: 412 FERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 457



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 7/267 (2%)

Query: 10  LQNKIR--ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL 66
           L NK++    +P  + +N V +        + A +  R     GL   D+ T+  +I   
Sbjct: 271 LMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGL-KFDKITYTILITEH 329

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
            + G + +A  +   M + G   D + +  LI +Y ++  ++ES K FD    +G+  + 
Sbjct: 330 CKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTK 389

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           ++Y ++     + GR  +A R F +M+  G      TY  ++ G     +LE A   +E 
Sbjct: 390 QTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEG 449

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M  + +    VT  T+   Y R +K   A  +   + ++    TV     +++   A+  
Sbjct: 450 MLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTV---DVVVRKLSALGD 506

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALL 273
            D A     ++   D   +  TYT  +
Sbjct: 507 VDAASLFLKKVLDEDYAVDHATYTGFI 533


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/506 (23%), Positives = 225/506 (44%), Gaps = 47/506 (9%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +  V   L  ++ +  A+   R ++ +G+   D  T+  +I  L    +L+ A  +L +M
Sbjct: 126 YTTVMRGLCASRRTGEAVALLRSMQASGV-RADVVTYGTLIRGLCDASELDAALELLDEM 184

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
              GVQ +  ++  L+  Y + G  Q+  K+F+ M + G++  V  +  L   + + G+ 
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKT 244

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +  + M+  G+EP   TYNV++        +  A+   ++M  +G++ DVVTYNT+
Sbjct: 245 GKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTL 304

Query: 203 INGYNRFKKMDEAEKLFAEMKEKN--IEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           I G +   +MDEA     EM + +  +EP V+++ ++I G   + R   A+++ + M   
Sbjct: 305 IAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAER 364

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
               N VTY  L+ G     K+     ++ E+    + P                     
Sbjct: 365 GCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEP--------------------- 403

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
                          ++  Y ILI  F K    DRA K L  + ++ I          E 
Sbjct: 404 ---------------DSFTYSILINGFSKMWEVDRAEKFLCTMRQRGI--------KAEL 440

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
             Y P++  +C  G   +A   F ++ K   LD +A++ +I G  K G+  +  ++++ M
Sbjct: 441 FHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDM 500

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              G+  DA  Y  LI  Y + G+  +A+  L  M   G  P  ++F S+++    +G+ 
Sbjct: 501 LDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQT 560

Query: 501 QTASRVMKSMVEKGVKENLDLVAKIL 526
               +++  M  K V  +  +++ I+
Sbjct: 561 DKVLKLIHEMRAKNVAFDPKIISTII 586



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/495 (22%), Positives = 216/495 (43%), Gaps = 52/495 (10%)

Query: 124 RSVKSYDALFKLILRRG--RYMMAKRYFNKMLSEG---IEPTRHTYNVMLWGFFLSLKLE 178
           R   SY+ +   + RRG      A+     M  E      P   +Y  ++ G   S +  
Sbjct: 81  RDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTG 140

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A+     M++ G+  DVVTY T+I G     ++D A +L  EM    ++P V+ Y+ ++
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           +GY    R  D  ++F++M    +KP+ + +T L+  LC  GK  +  KV   MV+R + 
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P +   +  L+   CK G +  A  + K M    +  +   Y  LI         D A+ 
Sbjct: 261 P-NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMS 319

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL------ 412
            L+++++ + ++ P      +  ++N +I  LC  G+  +A      + ++G +      
Sbjct: 320 FLEEMIQGDTVVEP------DVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTY 373

Query: 413 ------------------------------DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
                                         D   ++ LI G SK    D A + +  M +
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           RG+  +   YI L+ +  ++G    A    + M ++    A + + +++    + G ++T
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIA-YSTMIHGACKSGDMKT 492

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
             ++++ M+++G+  +    + ++      G +EEA   +  M  SG VP+   FDSL+ 
Sbjct: 493 VKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIK 552

Query: 560 VLSEKGKTIAAVKLL 574
             S +G+T   +KL+
Sbjct: 553 GYSAEGQTDKVLKLI 567



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 158/353 (44%), Gaps = 19/353 (5%)

Query: 300 KDNSVFMKLLGVQCKSG--HLNAAADVLKAMIRLSIPT---EAGHYGILIENFCKAEMYD 354
           +D   +  +L   C+ G  HL  A  +L  M R + P     A  Y  ++   C +    
Sbjct: 81  RDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTG 140

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A+ LL  +          S +  +  +Y  +I+ LC   +   A     ++   GV  +
Sbjct: 141 EAVALLRSM--------QASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPN 192

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V ++ L+RG+ + G      ++ + M RRG+  D   +  LI+   ++G+   A    D
Sbjct: 193 VVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKD 252

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M++ G  P    +  ++ SL ++G V+ A  + K M +KGV  ++     ++  L    
Sbjct: 253 MMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVL 312

Query: 534 HVEEALGRIDLMMQSGSV--PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
            ++EA+  ++ M+Q  +V  P+   F+S++  L + G+   AVK+ +    R C+ +L +
Sbjct: 313 EMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVT 372

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
           Y  ++   L   K   A +++ ++   G   D  +   LI G ++     +A+
Sbjct: 373 YNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAE 425



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 39/279 (13%)

Query: 379 EASSYNPMIQHLCHNG--QTGKAEIFF----RQLMKKGVLDPVAFNNLIRGHSKEGNPDS 432
           +A SYN ++  LC  G     +A        R+       + V++  ++RG         
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A  +++ M   GV  D   Y  LI       E   A   LD M   G  P   ++  ++ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
                GR Q   +V + M  +G+K                          D++M      
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKP-------------------------DVIM------ 230

Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            F  L+  L ++GKT  A K+ D  + R    ++ +Y  ++++L   G    A ++  ++
Sbjct: 231 -FTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEM 289

Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGE 650
            +KG   D  + + LIAGL+      +A   L  MI+G+
Sbjct: 290 DDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGD 328


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 145/624 (23%), Positives = 274/624 (43%), Gaps = 33/624 (5%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR--CILLDMPKKGVQWD 90
           + N E  ++FF+WV R   + +D +  ++++ +L        A+   +LL      +Q  
Sbjct: 57  SNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLL------IQEC 110

Query: 91  EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
           ED          + G+V+  +   D M +LG   S   Y  L   + +     +A   + 
Sbjct: 111 ED---------SENGVVK-LMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYR 160

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           +M++EG       Y  ++     +  ++ A  F   +   G  LD     +++    R  
Sbjct: 161 RMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRD 220

Query: 211 KMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
            + EA ++F +M KE+N  P  ++Y+ +I G     R ++A ++  EM     +P+  TY
Sbjct: 221 DLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 280

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
           T L+   CD G   +  K+L EM  +   P  ++ +  L+   C+ G +  A  V + M+
Sbjct: 281 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHT-YTILIDRLCREGKIEEANGVFRKML 339

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           +  +      +  LI  +CK      A +LL  ++EK               +YN +++ 
Sbjct: 340 KHGLCPGIITFNALINGYCKEGWVVSAFQLLS-VMEK-------GNCKPNIRTYNELMEG 391

Query: 390 LCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC   ++ KA +  R+++  G+L D V +N L+ G  KEG  + AF I   M   G+  D
Sbjct: 392 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              +  LI+   + G    A   L SM++ G S     F ++++   + G+ +    + +
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 511

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKG 565
           +MVE             L+AL     + EA   +  MM+ G VP+  +   L+      G
Sbjct: 512 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 571

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +T  ++K+L+      C  ++ +Y  +++ L   G+   A +ILF +   G   +  +  
Sbjct: 572 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 631

Query: 626 KLIAGLNQEGNTKQA-DILSRMIR 648
            L+    + G   +A  I+S M++
Sbjct: 632 VLVKAHVKAGRLDRAFQIVSTMVK 655



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 143/613 (23%), Positives = 257/613 (41%), Gaps = 70/613 (11%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L   G+L  A  +  +M +KG Q     + VLI++    G+  +++K+ D M
Sbjct: 244 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 303

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
                  +V +Y  L   + R G+   A   F KML  G+ P   T+N ++ G+     +
Sbjct: 304 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 363

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
            +A +    M+      ++ TYN ++ G  R  K  +A  L   + +  + P  ++Y  +
Sbjct: 364 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 423

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G+    + + A  IF+ M S  ++P+  T+TAL+ GLC  G++ +   +L  MV++ I
Sbjct: 424 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 483

Query: 298 PPKDNSVFMKLLGVQCKSG-----------------------------------HLNAAA 322
              D   F  L+   CK G                                    LN A 
Sbjct: 484 SL-DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEAN 542

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
            +L  M++  +      + ILIE  C+A     ++K+L+++         Q+       +
Sbjct: 543 AMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM--------KQAGCSPNVYT 594

Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN--LIRGHSKEGNPDSAFEIVKIM 440
           Y  +I  LC+NG+  +AE     +   GV  P  F    L++ H K G  D AF+IV  M
Sbjct: 595 YTIIINGLCNNGRVEEAETILFSMSSFGV-SPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 653

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKT----------ALDSMIEDGHSPASSLFRSV 490
            + G   ++  Y  L+  ++       A+           +L S   D +  +S +FR +
Sbjct: 654 VKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFR-L 712

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           M+       V  A ++   + + GV    DL   ++  L   G + EA      M++ G 
Sbjct: 713 MD-------VDHALKIRDEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDMVKHGL 764

Query: 551 VPNFDSLLSVLSEKGKTIAAVKLLDF---CLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
            P+  ++ S++    KT      L+F    L    +   ASY  V+  L   G+   A  
Sbjct: 765 FPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQK 823

Query: 608 ILFKIMEKGGVTD 620
           ++  ++   G+ +
Sbjct: 824 LVSDLVRHTGIEE 836



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/441 (22%), Positives = 189/441 (42%), Gaps = 50/441 (11%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A   F  +  AGL   D  T   +I+ L ++G+L  A  IL  M KKG+  DE  F  LI
Sbjct: 436 AFNIFNSMNSAGL-EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 494

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + + K G  ++   +F+ M +     +  +++     + +  +   A     KM+  G+ 
Sbjct: 495 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 554

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P+  T+ +++ G   + +   +++  E MK  G S +V TY  +ING     +++EAE +
Sbjct: 555 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 614

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              M    + P   +Y  ++K +V   R D A +I   M     +PN+  Y+ALL G   
Sbjct: 615 LFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVL 674

Query: 279 AGKMVEVQKV--LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           +   +  + +    ++  R +  ++N          C S H+    DV            
Sbjct: 675 SNTAIGARALSSTGDLDARSLSSEEND-------NNCLSSHVFRLMDV------------ 715

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
                            D A+K+ D++ +  +   P   L      YN ++  LC  G+ 
Sbjct: 716 -----------------DHALKIRDEIKKCGV---PTEDL------YNFLVVGLCKEGRI 749

Query: 397 GKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVK-IMGRRGVPRDADAYICL 455
            +A+   + ++K G+    A +++I  + K    D+  E +K ++  + VP  A +Y  +
Sbjct: 750 IEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFA-SYCWV 808

Query: 456 IESYLRKGEPADAKTALDSMI 476
           I     +G   +A+  +  ++
Sbjct: 809 IHGLRNEGRVQEAQKLVSDLV 829


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 208/445 (46%), Gaps = 12/445 (2%)

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           V+I    +KG ++E+ ++ + M+ L  + S  +Y+ L   +L +G    A     +M +E
Sbjct: 279 VVITGLARKGDLEEAAEMVEGMR-LSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENE 337

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           GI PT  TYN M+ G   S ++E A   F +M++ G+  DV+TYN+++NGY +   + EA
Sbjct: 338 GIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEA 397

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             LF +++   + PTV++Y  +I GY  +   ++A R+ +EM      P+  TYT L+ G
Sbjct: 398 LLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKG 457

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
             +A  +   ++   EM+ + + P D   +   +  +   G +  A  + + M+   I +
Sbjct: 458 SHNACSLAMAREFFDEMLSKGLQP-DCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISS 516

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   Y ILI+  CK    + A  L  K+V         + L  +  +Y  +I   C  G 
Sbjct: 517 DTVTYNILIDGLCKTGNLNDAKDLQMKMV--------HNGLQPDCITYTCLIHAHCERGL 568

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A  FF+ ++  G+    V +   I  + + GN  SA+   + M   GV  +   Y  
Sbjct: 569 LREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 628

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI +  R G    A      M+E G  P    +  +++   ++G  + A R    M + G
Sbjct: 629 LIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNG 688

Query: 515 VKENLDLVAKILEALLMRGHVEEAL 539
           +  +  L  K L      GH+  A+
Sbjct: 689 IHPDY-LTHKALFKGFDEGHMNHAI 712



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 131/550 (23%), Positives = 242/550 (44%), Gaps = 22/550 (4%)

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
            +  F  M   GV   VK  + + +++    R+        +ML  GIEP+  TYN +L 
Sbjct: 186 CLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLD 245

Query: 170 GFFLSLKLETAIRFFEDMKSRGISL--DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
            F    + +      ++M++RG     + VT+N +I G  R   ++EA ++   M+    
Sbjct: 246 SFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK- 304

Query: 228 EPTVISYTTMIKGYVA---VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
           + +  +Y  +I G +A   V++ADD L++  EM++  + P  VTY A++ GL  +G++  
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADD-LQL--EMENEGIMPTVVTYNAMIHGLLQSGQVEA 361

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            Q    EM    + P D   +  LL   CK+G L  A  +   +    +      Y ILI
Sbjct: 362 AQVKFVEMRAMGLQP-DVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILI 420

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
           + +C+    + A +L +++VE+  +         +  +Y  +++   +      A  FF 
Sbjct: 421 DGYCRLGDLEEARRLKEEMVEQGCL--------PDVCTYTILMKGSHNACSLAMAREFFD 472

Query: 405 QLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           +++ KG+  D  A+N  IR     G    AF + ++M   G+  D   Y  LI+   + G
Sbjct: 473 EMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTG 532

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
              DAK     M+ +G  P    +  ++ +  E G ++ A +  K M+  G+  +     
Sbjct: 533 NLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYT 592

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
             + A   RG++  A G    M++ G  PN   ++ L+  L   G+T  A +     L R
Sbjct: 593 VFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLER 652

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
             + +  +Y  ++D     G   +A    F++ + G   D+ +   L  G ++       
Sbjct: 653 GLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHMNHAI 712

Query: 641 DILSRMIRGE 650
           + L   + GE
Sbjct: 713 EYLENAVLGE 722



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 97/187 (51%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+ L + G LN A+ + + M   G+Q D   +  LI ++ ++G+++E+ K F
Sbjct: 517 DTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFF 576

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M   G+  S  +Y        RRG    A  +F KML EG+EP   TYNV++     +
Sbjct: 577 KDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRT 636

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + + A R F +M  RG+  +  TY  +I+G  +    ++A + + EM +  I P  +++
Sbjct: 637 GRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTH 696

Query: 235 TTMIKGY 241
             + KG+
Sbjct: 697 KALFKGF 703


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 199/428 (46%), Gaps = 10/428 (2%)

Query: 61   KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
            +++ ++ ++ K +    +   M   G+  D   F +LI  + +   +  ++ +   M +L
Sbjct: 609  RVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKL 668

Query: 121  GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
            G   S+ +  +L     +  R+  A    + M   G  P    YN ++ G   +  L  A
Sbjct: 669  GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 728

Query: 181  IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            +  F  M+ +GI  D VTYNT+I+G +   +  +A +L  +M ++ I+P VI +T +I  
Sbjct: 729  LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 788

Query: 241  YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
            +V      +A  ++ EM    V PN  TY +L+ G C  G + + + +   MV +   P 
Sbjct: 789  FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP- 847

Query: 301  DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
            D   +  L+   CKS  +     +   M    +  +A  Y  LI  +C+A   + A K+ 
Sbjct: 848  DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 907

Query: 361  DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
            +++V+          +  +  +YN ++  LC+NG+  KA +    L K  + +D + +N 
Sbjct: 908  NRMVD--------CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 959

Query: 420  LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
            +I+G  +      A+ + + + R+GV  DA AYI +I    RKG   +A      M EDG
Sbjct: 960  IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 1019

Query: 480  HSPASSLF 487
              P+  ++
Sbjct: 1020 FMPSERIY 1027



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 147/604 (24%), Positives = 270/604 (44%), Gaps = 30/604 (4%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+ L + G+LN A  +L +M KKG+  D   +  L+      G   ++ ++   M +  
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +   V ++ AL  + +++G    A+  + +M+   ++P   TYN ++ G  +  +L  A 
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + F+ M S+G   +VVTYNT+I+G+ +F+ +DE  KLF  M  +     + +Y T+I GY
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM--VERYIPP 299
             V +   AL IF  M S  V P+ +T+  LL GLC  G++        +M   E+YI  
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGI 421

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
              ++ +  L   CK+  +  A ++   +    +  +A  Y I+I   CK      A +L
Sbjct: 422 VAYNIMIHGL---CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478

Query: 360 LDKLVEKEIILRPQSTLDM--EASSYNPMIQ-HLCHNGQTGKAEIFFRQLMKKGVLDPVA 416
           + ++ E+ II +  +  D   E SS N  I   L    +  K+  F+ Q      L P+A
Sbjct: 479 IRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQR-----LIPIA 533

Query: 417 FNNLIRGHSKE--------GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           F++ ++G  +          NP+++          G       Y   + + L   +  DA
Sbjct: 534 FSSSVKGFVRRHYLLLERGNNPETSLS----RSFSGASHH-HHYRERLRNELHCIKFDDA 588

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
            +    M++    P+   F  V+  + +  +      +   M   G+  +L     ++  
Sbjct: 589 FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHC 648

Query: 529 LLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
                 +  AL  +  MM+ G   S+    SLL+   +  +   AV L+D   G   + +
Sbjct: 649 FCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN 708

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN-TKQADILS 644
           +  Y  V++ L       NA  + + + +KG   D  + + LI+GL+  G  T  A +L 
Sbjct: 709 VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR 768

Query: 645 RMIR 648
            M++
Sbjct: 769 DMVK 772



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 185/411 (45%), Gaps = 13/411 (3%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E  + F + +E  G+ +HD  +   +I    R  +L+ A  +L  M K G +     F  
Sbjct: 88  ETVIYFSQKMELYGI-SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           L+  +     + ++  +  +M + G E +V  Y+ L   + + G   +A    N+M  +G
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +     TYN +L G   S +   A R   DM  R I+ DVVT+  +I+ + +   +DEA+
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +L+ EM + +++P  ++Y ++I G     R  DA + FD M S    PN VTY  L+ G 
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326

Query: 277 CDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           C    + E  K+ + M  E +    D   +  L+   C+ G L  A D+   M+   +  
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGF--NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   + IL+   C     + A+   D + E E  +           +YN MI  LC   +
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYI--------GIVAYNIMIHGLCKADK 436

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
             KA   F +L  +GV  D   +  +I G  K G    A E+++ M   G+
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 192/430 (44%), Gaps = 10/430 (2%)

Query: 125  SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
            S+  +  +  +I +  ++ +    ++KM + GI    +++ +++  F    +L  A+   
Sbjct: 603  SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662

Query: 185  EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
              M   G    +VT  +++NG+ +  +  EA  L   M      P V+ Y T+I G    
Sbjct: 663  GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 722

Query: 245  ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
               ++AL +F  M+   ++ +AVTY  L+ GL ++G+  +  ++LR+MV+R I P +   
Sbjct: 723  RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP-NVIF 781

Query: 305  FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
            F  L+    K G+L  A ++ K MIR S+      Y  LI  FC       A  + D +V
Sbjct: 782  FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841

Query: 365  EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
             K     P      +  +YN +I   C + +       F ++  +G++ D   +N LI G
Sbjct: 842  SKGCF--P------DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 893

Query: 424  HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
            + + G  + A ++   M   GV  D   Y  L++     G+   A   ++ + +      
Sbjct: 894  YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 953

Query: 484  SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
               +  +++ L    +++ A  + +S+  KGVK +      ++  L  +G   EA     
Sbjct: 954  IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 1013

Query: 544  LMMQSGSVPN 553
             M + G +P+
Sbjct: 1014 RMKEDGFMPS 1023



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 158/303 (52%), Gaps = 3/303 (0%)

Query: 23   HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
            +N V N L   ++  +AL+ F  +E+ G+   D  T+  +I  L   G+   A  +L DM
Sbjct: 712  YNTVINGLCKNRDLNNALEVFYCMEKKGI-RADAVTYNTLISGLSNSGRWTDAARLLRDM 770

Query: 83   PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             K+ +  +   F  LI+++ K+G + E+  ++  M +  V  +V +Y++L       G  
Sbjct: 771  VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 830

Query: 143  MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
              AK  F+ M+S+G  P   TYN ++ GF  S ++E  ++ F +M  +G+  D  TYNT+
Sbjct: 831  GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 890

Query: 203  INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
            I+GY +  K++ A+K+F  M +  + P +++Y  ++       + + AL + ++++  ++
Sbjct: 891  IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 950

Query: 263  KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
              + +TY  ++ GLC   K+ E   + R +  + + P D   ++ ++   C+ G L   A
Sbjct: 951  DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP-DAIAYITMISGLCRKG-LQREA 1008

Query: 323  DVL 325
            D L
Sbjct: 1009 DKL 1011



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 178/418 (42%), Gaps = 12/418 (2%)

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           RY     +  KM   GI    +++ +++  F    +L  A+     M   G    +VT+ 
Sbjct: 86  RYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFG 145

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           ++++G+    ++ +A  L   M +   EP V+ Y T+I G       + AL + +EM+  
Sbjct: 146 SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            +  + VTY  LL GLC +G+  +  ++LR+M++R I P D   F  L+ V  K G+L+ 
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP-DVVTFTALIDVFVKQGNLDE 264

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFC-KAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
           A ++ K MI+ S+      Y  +I   C    +YD A K  D +  K     P       
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD-AKKTFDLMASKGCF--PN------ 315

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
             +YN +I   C      +    F+++  +G   D   +N LI G+ + G    A +I  
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFC 375

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M  R V  D   +  L+      GE   A    D M E         +  ++  L +  
Sbjct: 376 WMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKAD 435

Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
           +V+ A  +   +  +GVK +      ++  L   G   EA   I  M + G +   ++
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/443 (21%), Positives = 191/443 (43%), Gaps = 15/443 (3%)

Query: 211  KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
            K D+A  LF EM +    P+++ +T ++     + + D  + ++ +M++  +  +  ++T
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 271  ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
             L+   C   ++     +L +M++    P   ++   LL   C+      A  ++ +M  
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTL-GSLLNGFCQGNRFQEAVSLVDSMDG 702

Query: 331  LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
                     Y  +I   CK    + A+++   + +K I          +A +YN +I  L
Sbjct: 703  FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI--------RADAVTYNTLISGL 754

Query: 391  CHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
             ++G+   A    R ++K+ + DP  + F  LI    KEGN   A  + K M RR V  +
Sbjct: 755  SNSGRWTDAARLLRDMVKRKI-DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 813

Query: 449  ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
               Y  LI  +   G   DAK   D M+  G  P    + +++    +  RV+   ++  
Sbjct: 814  VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 873

Query: 509  SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
             M  +G+  +      ++      G +  A    + M+  G  P+   ++ LL  L   G
Sbjct: 874  EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 933

Query: 566  KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
            K   A+ +++     +  +D+ +Y  ++  L    K   A+ +   +  KG   D  +  
Sbjct: 934  KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 993

Query: 626  KLIAGLNQEGNTKQADILSRMIR 648
             +I+GL ++G  ++AD L R ++
Sbjct: 994  TMISGLCRKGLQREADKLCRRMK 1016



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 95/483 (19%), Positives = 200/483 (41%), Gaps = 44/483 (9%)

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
           GF  S++ E A   F +M        +V +  ++      ++ +       +M+   I  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            + S+T +I  +    R   AL +  +M     +P+ VT+ +LL G C   ++ +   ++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
             MV+    P +  V+  L+   CK+G LN A ++L  M +  +  +   Y  L+   C 
Sbjct: 165 ILMVKSGYEP-NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
           +  +  A ++L  ++++ I        + +  ++  +I      G   +A+  ++++++ 
Sbjct: 224 SGRWSDAARMLRDMMKRSI--------NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275

Query: 410 GVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            V DP  V +N++I G    G    A +   +M  +G   +   Y  LI  + +     +
Sbjct: 276 SV-DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
                  M  +G +     + +++    + G+++ A  +   MV + V  ++     +L 
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
            L + G +E AL + D M +              SEK                   I + 
Sbjct: 395 GLCVNGEIESALVKFDDMRE--------------SEK------------------YIGIV 422

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
           +Y  ++  L  A K   A+ +  ++  +G   D ++   +I GL + G  ++AD L R +
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482

Query: 648 RGE 650
           + E
Sbjct: 483 KEE 485



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/444 (22%), Positives = 190/444 (42%), Gaps = 34/444 (7%)

Query: 162  HTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
            H Y   L      +K + A   F +M +SR I   +V +  ++    +  K D    L+ 
Sbjct: 570  HHYRERLRNELHCIKFDDAFSLFCEMLQSRPIP-SIVDFTRVLTVIAKMNKFDIVIYLYH 628

Query: 221  EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
            +M+   I   + S+T +I  +    R   AL +  +M     +P+ VT  +LL G C   
Sbjct: 629  KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 688

Query: 281  KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            +  E   ++  M      P +  ++  ++   CK+  LN A +V   M +  I  +A  Y
Sbjct: 689  RFQEAVSLVDSMDGFGFVP-NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTY 747

Query: 341  GILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLD--------MEAS-------- 381
              LI     +  +  A +LL  +V+++I   ++   + +D        +EA         
Sbjct: 748  NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 807

Query: 382  --------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
                    +YN +I   C +G  G A+  F  ++ KG   D V +N LI G  K    + 
Sbjct: 808  RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 867

Query: 433  AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
              ++   M  +G+  DA  Y  LI  Y + G+   A+   + M++ G SP    +  +++
Sbjct: 868  GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 927

Query: 493  SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
             L  +G+++ A  +++ + +  +  ++     I++ L     ++EA      + + G  P
Sbjct: 928  CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 987

Query: 553  N---FDSLLSVLSEKGKTIAAVKL 573
            +   + +++S L  KG    A KL
Sbjct: 988  DAIAYITMISGLCRKGLQREADKL 1011



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 162/431 (37%), Gaps = 61/431 (14%)

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A + F++ +EK           +  G++   R +DA  +F EM      P+ V +T LL 
Sbjct: 31  AARAFSDYREK-----------LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLT 79

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
              +  +  E      + +E Y    D   F  L+   C+   L+ A  VL  M++L   
Sbjct: 80  ATANL-RRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE 138

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                +G L+  FC       A  L        +IL       M  S Y P +       
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSL--------VIL-------MVKSGYEPNV------- 176

Query: 395 QTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
                               V +N LI G  K G  + A E++  M ++G+  D   Y  
Sbjct: 177 --------------------VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           L+      G  +DA   L  M++   +P    F ++++   + G +  A  + K M++  
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           V  N      I+  L M G + +A    DLM   G  PN   +++L+S   +       +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 572 KLLD--FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           KL     C G +   D+ +Y  ++      GK   A  I   ++ +    D  +   L+ 
Sbjct: 337 KLFQRMSCEGFN--ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394

Query: 630 GLNQEGNTKQA 640
           GL   G  + A
Sbjct: 395 GLCVNGEIESA 405


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 193/414 (46%), Gaps = 11/414 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL  F  +   G F  D  T+  +I  L +VG  + A  +L  M +K  Q +   +  +I
Sbjct: 150 ALHLFDKMIGEG-FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +S  K   V E+  +F  M   G+   + +Y++L   +     +       N+M+   I 
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   ++N ++       K+  A    + M  RG+  +VVTY  +++G+    +MDEA K+
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M  K   P VISY T+I GY  ++R D A+ +F EM   ++ P+ VTY+ L+ GLC 
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 388

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
             ++ +   +  EMV     P +   +  LL   CK+ +L  A  +LKA+   ++  +  
Sbjct: 389 VERLQDAIALFHEMVACSQIP-NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 447

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
              I I+  C+A   + A  L   L  K   L+P      +  +Y+ MI  LC  G   +
Sbjct: 448 VNNIAIDGMCRAGELEAARDLFSNLSSKG--LQP------DVWTYSIMINGLCRRGLLDE 499

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           A   FR++ + G  L+   +N + RG  +      A ++++ M  RG   DA  
Sbjct: 500 ASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 553



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 206/457 (45%), Gaps = 15/457 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           T ++ I + G++G+  H    L D M  +G + D   +  LI    K G    ++++   
Sbjct: 136 TLIRGIYVEGKIGEALH----LFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M Q   + +V +Y+ +   + +  +   A   F++M+++GI P   TYN ++       +
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
            +       +M    I  DVV++NT+++   +  K+ EA  +  +M ++ +EP V++YT 
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++ G+  +   D+A+++FD M      PN ++Y  L+ G C   ++ +   +  EM  + 
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 371

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P D   +  L+   C    L  A  +   M+  S       Y IL++  CK      A
Sbjct: 372 LIP-DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 430

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV- 415
           + LL K +E        S LD +    N  I  +C  G+   A   F  L  KG+   V 
Sbjct: 431 MALL-KAIEG-------SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVW 482

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            ++ +I G  + G  D A ++ + M   G   +   Y  +   +LR  E + A   L  M
Sbjct: 483 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 542

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
           +  G S  +S     ++ L +DG  Q+  ++++  V+
Sbjct: 543 VARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 120/525 (22%), Positives = 221/525 (42%), Gaps = 22/525 (4%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           H +  H   I+  G +   N  R + +  P   V +++     L+ S  K       + +
Sbjct: 33  HSKSLHFNTID--GAISSFN--RMLRMQPPPSTVDFNK-----LLTSIAKMKHHSTLLSL 83

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
              M   G+  ++ +   L        R   A     K+L  G +P   T+  ++ G ++
Sbjct: 84  SHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYV 143

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
             K+  A+  F+ M   G   DVVTY T+ING  +      A +L   M +KN +P V +
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y T+I       +  +A  +F EM +  + P+  TY +L+  LC+  +   V  +L EMV
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +  I P D   F  ++   CK G +  A DV+  MI+  +      Y  L++  C     
Sbjct: 264 DSKIMP-DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
           D A+K+ D +V K  +  P         SYN +I   C   +  KA   F ++ ++ ++ 
Sbjct: 323 DEAVKVFDTMVCKGCM--PN------VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP 374

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D V ++ LI G         A  +   M       +   Y  L++   +    A+A   L
Sbjct: 375 DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 434

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
            ++      P   +    ++ +   G ++ A  +  ++  KG++ ++   + ++  L  R
Sbjct: 435 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 494

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           G ++EA      M ++G   N   ++++        +T  A++LL
Sbjct: 495 GLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLL 539



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/501 (21%), Positives = 202/501 (40%), Gaps = 48/501 (9%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML     P+   +N +L          T +     M S GI  ++ T + +IN +  
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++  A  + A++ +   +P   ++TT+I+G     +  +AL +FD+M     +P+ VT
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT 168

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ GLC                                    K G+ +AA  +L +M
Sbjct: 169 YGTLINGLC------------------------------------KVGNTSAAIRLLGSM 192

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           ++ +       Y  +I++ CK      A  L  ++V K I          +  +YN +I 
Sbjct: 193 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGI--------SPDIFTYNSLIH 244

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC+  +         +++   ++ D V+FN ++    KEG    A ++V  M +RGV  
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +   Y  L++ +    E  +A    D+M+  G  P    + +++    +  R+  A  + 
Sbjct: 305 NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 364

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEK 564
             M  + +  +    + ++  L     +++A+     M+    +PN  +   LL  L + 
Sbjct: 365 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 424

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
                A+ LL    G +   D+      +D +  AG+   A  +   +  KG   D  + 
Sbjct: 425 RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTY 484

Query: 625 DKLIAGLNQEGNTKQADILSR 645
             +I GL + G   +A  L R
Sbjct: 485 SIMINGLCRRGLLDEASKLFR 505



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/256 (19%), Positives = 106/256 (41%), Gaps = 33/256 (12%)

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           N   G    F R L  +     V FN L+   +K  +  +   +   M   G+P +    
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI S+        A + L  +++ GH P ++ F +++  ++ +G++  A  +   M+ 
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIG 159

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
           +G + +                                V  + +L++ L + G T AA++
Sbjct: 160 EGFRPD--------------------------------VVTYGTLINGLCKVGNTSAAIR 187

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
           LL   + ++C  ++ +Y  ++D+L    +   A+++  +++ KG   D  + + LI  L 
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247

Query: 633 QEGNTKQ-ADILSRMI 647
                K  A +L+ M+
Sbjct: 248 NLCEWKHVATLLNEMV 263


>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
          Length = 581

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 191/418 (45%), Gaps = 10/418 (2%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           ++ +L +  + + A  +   M  +G+  D      L+ +  +  +   + ++FD M + G
Sbjct: 114 LVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAG 173

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +   Y+A+  + L+ G    A+    +M + G+   R +YN ++  +        A+
Sbjct: 174 LAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAM 233

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              + M   GI  D VT+N+ I+G  +  ++ EA +LF EM      P  ++YTT+I GY
Sbjct: 234 CARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGY 293

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 ++A+++   M++  + P   TY A+L  LC+ G M EV ++L EM  R +   D
Sbjct: 294 CRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKV-QAD 352

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
           +     L+   CK G + +A  V K M+   +      Y  LI  FCKA   D A +   
Sbjct: 353 HVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFF 412

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
           ++V+        +      S ++ ++   C             +LMK+G+  D   + +L
Sbjct: 413 QMVD--------AGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSL 464

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           IR   ++G  D A  +   M  +G+  D+  Y  L  +YL KG P  A   LD M ++
Sbjct: 465 IRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKN 522



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 186/432 (43%), Gaps = 11/432 (2%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
           VL  +     A++ F  +   GL   D      ++  L R      AR +  +M + G+ 
Sbjct: 117 VLAQSARPHDAVRVFDHMRARGLAP-DAHACTALLTALARARMTATARRVFDEMARAGLA 175

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
               ++  ++    K G   ++  I   M   GV     SY+ +  L  R+G    A   
Sbjct: 176 ATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCA 235

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
            ++M  EGI P   T+N  + G     +++ A + F +M +   + D VTY T+I+GY R
Sbjct: 236 RDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCR 295

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
              ++EA KL   M+   + P V +Y  +++         +  R+  EM    V+ + VT
Sbjct: 296 AGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVT 355

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
              L+   C  G M    KV ++M+E  +   ++  +  L+   CK+  L+ A +    M
Sbjct: 356 CNTLINAYCKRGDMTSACKVKKKMMESGL-QLNHFTYKALIHGFCKARELDGAKEAFFQM 414

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +          +  L++ FCK    D  + + D+L+++         L  + + Y  +I+
Sbjct: 415 VDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKR--------GLPPDKAVYRSLIR 466

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G   +A+  F Q+  KG++ D + +  L   +  +GNP +A   +  M +  +  
Sbjct: 467 RLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQLYI 526

Query: 448 DADAYICLIESY 459
               Y CL  SY
Sbjct: 527 TPQIYNCLCTSY 538



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 174/406 (42%), Gaps = 12/406 (2%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A R F+ M + G+ P  H    +L     +    TA R F++M   G++     YN M++
Sbjct: 127 AVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLH 186

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              +     +AE +   M    +     SY T+I  Y       +A+   D M    ++P
Sbjct: 187 VCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRP 246

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + VT+ + + GLC  G++ E  ++  EMV     P DN  +  L+   C++G++  A  +
Sbjct: 247 DTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATP-DNVTYTTLIDGYCRAGNVEEAVKL 305

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              M    +      Y  ++   C+        +LL ++  +++          +  + N
Sbjct: 306 RGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKV--------QADHVTCN 357

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I   C  G    A    +++M+ G+ L+   +  LI G  K    D A E    M   
Sbjct: 358 TLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDA 417

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTAL-DSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           G   +   +  L++ + +K   ADA  A+ D +++ G  P  +++RS++  L   G V  
Sbjct: 418 GFSPNYSVFSWLVDGFCKKNN-ADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQ 476

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
           A RV   M  KG+  +  + A +    L +G+   AL  +D M ++
Sbjct: 477 AQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKN 522



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 147/351 (41%), Gaps = 4/351 (1%)

Query: 26  VYN-VLHGAKNSEHALQFFRWVER--AGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           VYN +LH    +  A Q    V R  A     DR ++  +I +  R G    A C    M
Sbjct: 180 VYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRM 239

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K+G++ D   +   I    K+G V+E+ ++F  M          +Y  L     R G  
Sbjct: 240 DKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNV 299

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A +   +M + G+ P   TYN +L        ++   R   +M  R +  D VT NT+
Sbjct: 300 EEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTL 359

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           IN Y +   M  A K+  +M E  ++    +Y  +I G+      D A   F +M     
Sbjct: 360 INAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGF 419

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
            PN   ++ L+ G C       V  +  E+++R +PP D +V+  L+   C+ G ++ A 
Sbjct: 420 SPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPP-DKAVYRSLIRRLCRKGLVDQAQ 478

Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
            V   M    +  ++  Y  L   +        A+  LD + + ++ + PQ
Sbjct: 479 RVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQLYITPQ 529



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/423 (22%), Positives = 169/423 (39%), Gaps = 56/423 (13%)

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P V S+  ++    A  R  DA+R+FD M++  + P+A   TALL  L  A      ++V
Sbjct: 108 PHVPSWLVLVLAQSA--RPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRV 165

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             EM    +    + V+  +L V  K+G    A  ++  M    +  +   Y  +I  +C
Sbjct: 166 FDEMARAGLAATTH-VYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYC 224

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQLM 407
           +  M   A+   D++ +KE I RP +       ++N  I  LC  G+  +A ++F   + 
Sbjct: 225 RKGMGYEAMCARDRM-DKEGI-RPDTV------TWNSSIHGLCKEGRVKEAAQLFTEMVA 276

Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR-----------------RGVPRD-- 448
            +   D V +  LI G+ + GN +   E VK+ GR                 R +  D  
Sbjct: 277 AQATPDNVTYTTLIDGYCRAGNVE---EAVKLRGRMEAAGMLPGVATYNAILRKLCEDGN 333

Query: 449 -----------------ADAYIC--LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
                            AD   C  LI +Y ++G+   A      M+E G       +++
Sbjct: 334 MKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKA 393

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           ++    +   +  A      MV+ G   N  + + +++    + + +  L   D +M+ G
Sbjct: 394 LIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRG 453

Query: 550 SVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
             P+   + SL+  L  KG    A ++ D    +  + D   Y  +    L  G    A 
Sbjct: 454 LPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAAL 513

Query: 607 SIL 609
           + L
Sbjct: 514 NTL 516



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 4/245 (1%)

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAF 434
           L  +A +   ++  L     T  A   F ++ + G+      +N ++    K G+   A 
Sbjct: 139 LAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAE 198

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            IV  M   GV  D  +Y  +I  Y RKG   +A  A D M ++G  P +  + S +  L
Sbjct: 199 AIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGL 258

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL---GRIDLMMQSGSV 551
            ++GRV+ A+++   MV      +      +++     G+VEEA+   GR++       V
Sbjct: 259 CKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGV 318

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             ++++L  L E G      +LL    GR    D  +   +++A    G   +A  +  K
Sbjct: 319 ATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKK 378

Query: 612 IMEKG 616
           +ME G
Sbjct: 379 MMESG 383



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/218 (19%), Positives = 89/218 (40%), Gaps = 3/218 (1%)

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
           ++   P  A  +   M  RG+  DA A   L+ +  R    A A+   D M   G +  +
Sbjct: 119 AQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATT 178

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
            ++ +++    + G    A  ++  M   GV  +      ++     +G   EA+   D 
Sbjct: 179 HVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDR 238

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M + G  P+   ++S +  L ++G+   A +L    +      D  +Y  ++D    AG 
Sbjct: 239 MDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGN 298

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
              A  +  ++   G +    + + ++  L ++GN K+
Sbjct: 299 VEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKE 336


>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
          Length = 648

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 219/500 (43%), Gaps = 46/500 (9%)

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           E A+  F  +   G+  DV +YNT+I+G+++  ++D+A +LF +M E+++ P V++Y ++
Sbjct: 46  ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 105

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G    +    + R+ ++M    ++PN  TY +L+ G   AG   E  +V +EM    +
Sbjct: 106 IDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGL 165

Query: 298 PP---KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
            P     NS    L    C+   +  A D+  +M+          Y  L+  +     + 
Sbjct: 166 IPCVVNCNSFIHAL----CRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFA 221

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
               L++ +V K I+  P          +N +I      G   KA + F  +  KG++ D
Sbjct: 222 NMNSLVNLMVSKGIV--PNHRF------FNILINAYARCGMMDKAMLIFEDMQNKGMIPD 273

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V F  +I    + G  D A      M   GVP     Y CLI+     GE   AK  + 
Sbjct: 274 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELIS 333

Query: 474 SMI-EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
            M+ +D   P    F S++ +LF++GRV     +M  MV+ G + N+     ++E   + 
Sbjct: 334 EMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLV 393

Query: 533 GHVEEALGRIDL--------------------------MMQSG---SVPNFDSLLSVLSE 563
           G++EEAL  + L                          M++SG   S+  +  +L  L  
Sbjct: 394 GNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCR 453

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
              T  A  LL+     +   D+ ++  V+ A+L  G+   A  +   I   G V    +
Sbjct: 454 NNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHT 513

Query: 624 SDKLIAGLNQEGNTKQADIL 643
            + +I+ L +E + ++AD L
Sbjct: 514 YNLMISNLIKEESYEEADNL 533



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 221/507 (43%), Gaps = 25/507 (4%)

Query: 42  FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESY 101
           F++ +E++   + D  T+  +I+ L +  ++  +  +L  M   G++ +   +  LI  Y
Sbjct: 87  FYKMIEQS--VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGY 144

Query: 102 GKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTR 161
              G+ +ESV++F  M   G+   V + ++    + R  R   AK  F+ M+ +G +P  
Sbjct: 145 STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNI 204

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
            +Y+ +L G+               M S+GI  +   +N +IN Y R   MD+A  +F +
Sbjct: 205 ISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFED 264

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M+ K + P  +++ T+I     + R DDAL  F+ M    V P+   Y  L+ G C+ G+
Sbjct: 265 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGE 324

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           +V+ ++++ EM+ + IPP     F  ++    K G +    D++  M++         + 
Sbjct: 325 LVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFN 384

Query: 342 ILIENFCKAEMYDRAIKLL---DKLVEKEIILR---------------PQSTLDMEASSY 383
            L+E +C     + A+  L    +L    I+                  +S   +   +Y
Sbjct: 385 SLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTY 444

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             ++  LC N  T +A +   +L    V  D + FN +I    K G    A E+   +  
Sbjct: 445 GVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAIST 504

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
            G+      Y  +I + +++    +A     S+ + G +P S L   ++  L +   V  
Sbjct: 505 YGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAK 564

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEAL 529
           AS  +  + E     NL L A  +  L
Sbjct: 565 ASNYLSIIDEN----NLTLEASTISLL 587



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/470 (22%), Positives = 215/470 (45%), Gaps = 18/470 (3%)

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           + G+  D   +  LI+ + K+G V ++ ++F  M +  V   V +Y++L   + +    +
Sbjct: 57  RTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMV 116

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            ++R   +M+  GI P   TYN +++G+  +   + ++R F++M S G+   VV  N+ I
Sbjct: 117 KSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFI 176

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +   R  ++ EA+ +F  M  K  +P +ISY+T++ GY A     +   + + M S  + 
Sbjct: 177 HALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIV 236

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           PN   +  L+      G M +   +  +M  + + P D   F  ++   C+ G L+ A  
Sbjct: 237 PNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIP-DTVTFATVISSLCRIGRLDDALH 295

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
               M+ + +P     Y  LI+  C      +A +L+ +++ K+I   P   +      +
Sbjct: 296 KFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDI---PPPGVKY----F 348

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           + +I +L   G+  + +     +++ G   + V FN+L+ G+   GN + A   + +  +
Sbjct: 349 SSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQ 408

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
             + R        I +Y+ +   A AK     MIE G + +   +  V+  L  +     
Sbjct: 409 LALNR--------IVTYMARRTTA-AKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDE 459

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
           A+ +++ +    VK ++     ++ A+L  G  +EA      +   G VP
Sbjct: 460 ANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVP 509



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 8/254 (3%)

Query: 391 CHNGQT-GKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C NG T G A +  R LM        +  +++        P+ A  +   + R G+  D 
Sbjct: 9   CSNGWTDGHAPM--RLLMLPPSTPTTSLIDVLPAECT--GPELALAVFGRLLRTGLGPDV 64

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
            +Y  LI+ + ++GE   A      MIE   SP    + S+++ L +   +  + RV++ 
Sbjct: 65  CSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQ 124

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGK 566
           MV+ G++ N      ++      G  +E++     M  SG +P   N +S +  L    +
Sbjct: 125 MVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNR 184

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A  + D  + +    ++ SY  +L    A G   N  S++  ++ KG V + +  + 
Sbjct: 185 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 244

Query: 627 LIAGLNQEGNTKQA 640
           LI    + G   +A
Sbjct: 245 LINAYARCGMMDKA 258


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/537 (23%), Positives = 220/537 (40%), Gaps = 77/537 (14%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL FF+ +  + LF H   T   MI  L   G+++  + +L  M  +G    ED+F  +I
Sbjct: 58  ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 117

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             Y + G+ + +V++F  +K+ G + SVK Y+ +   +L   R  M    +  M  +G E
Sbjct: 118 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 177

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT-------------------- 198
           P   TYNV+L     + K++ A +   +M ++G   + V+                    
Sbjct: 178 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL 237

Query: 199 ----------YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI---------- 238
                     YN +ING  + +      +L +EM EK I P VISY+T+I          
Sbjct: 238 AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIE 297

Query: 239 -------------------------KGYVAVERADDALRIFDEM-KSFDVKPNAVTYTAL 272
                                    KG        DAL ++++M + F ++PN V Y  L
Sbjct: 298 LAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTL 357

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + G C  G + +   V   M E    P   + +  L+    K G L  A  +   M+   
Sbjct: 358 VQGFCSHGNIDKAVSVFLHMEEIGCSPNIRT-YGSLINGFTKRGSLEGAVYIWNKMLTSG 416

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
                  Y  ++E  C+   +  A  L++ ++ KE              ++N  I+ LC 
Sbjct: 417 CCPNVVVYTSMVEALCRHSKFKEAESLIE-IMSKE-------NCAPSVPTFNAFIKGLCD 468

Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            G+   AE  FRQ+ ++    P  V +N L+ G +K    + A+ + + +  RGV     
Sbjct: 469 AGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTS 528

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
            Y  L+      G P  A   +  M+ +G SP       ++ +  + G+ + A +++
Sbjct: 529 TYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQML 585



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/505 (22%), Positives = 221/505 (43%), Gaps = 29/505 (5%)

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGI-EPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
            A+ K + +     +A  +F  + +  + + T  T+ VM+    +  ++++     + MK
Sbjct: 43  SAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK 102

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
            +G       + ++I+ Y +    + A ++F  +KE   +P+V  Y  ++   +   R  
Sbjct: 103 LQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 162

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
               ++ +MK    +PN  TY  LL  LC   K+   +K+L EM  +   P   S +  +
Sbjct: 163 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVS-YTTV 221

Query: 309 LGVQCKSGHLNAA---ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
           +   C+ G +      A+  + ++ +        Y  LI   CK   Y   ++L+ ++VE
Sbjct: 222 ISSMCEVGMVKEGRQLAERFEPVVSV--------YNALINGLCKERDYKGGVELMSEMVE 273

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGH 424
           K I             SY+ +I  L ++GQ   A     Q++K+G    +   ++L++G 
Sbjct: 274 KGI--------SPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGC 325

Query: 425 SKEGNPDSAFEIVKIMGRR-GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
              G    A ++   M R  G+  +  AY  L++ +   G    A +    M E G SP 
Sbjct: 326 FVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPN 385

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
              + S++    + G ++ A  +   M+  G   N+ +   ++EAL      +EA   I+
Sbjct: 386 IRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIE 445

Query: 544 LMMQ---SGSVPNFDSLLSVLSEKGKTIAAVKLL-DFCLGRDCIIDLASYEKVLDALLAA 599
           +M +   + SVP F++ +  L + G+   A K+         C  ++ +Y ++LD L  A
Sbjct: 446 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKA 505

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSS 624
            +   AY +  +I  +G   +W +S
Sbjct: 506 NRIEEAYGLTREIFMRG--VEWSTS 528



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 13/284 (4%)

Query: 25  LVYNVL------HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           + YN L      HG  N + A+  F  +E  G   + R T+  +I    + G L  A  I
Sbjct: 352 VAYNTLVQGFCSHG--NIDKAVSVFLHMEEIGCSPNIR-TYGSLINGFTKRGSLEGAVYI 408

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
              M   G   +  ++  ++E+  +    +E+  + +IM +     SV +++A  K +  
Sbjct: 409 WNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 468

Query: 139 RGRYMMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
            GR   A++ F +M  +    P   TYN +L G   + ++E A     ++  RG+     
Sbjct: 469 AGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTS 528

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYNT+++G         A +L  +M      P  I+   +I  Y    +A+ A+++ D +
Sbjct: 529 TYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLV 588

Query: 258 KSFDVK--PNAVTYTALLPGLCDAGKMVEVQKVLREMV-ERYIP 298
                K  P+ ++YT ++ GLC +    +   +   M+ ER IP
Sbjct: 589 SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 122/284 (42%), Gaps = 36/284 (12%)

Query: 402 FFRQLMKKGVL--DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
           FF+ +    +    P+ F  +IR  + +G  DS   +++ M  +G     D +I +I  Y
Sbjct: 61  FFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY 120

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            + G    A      + E G  P+  ++  V+++L  + R+Q    V + M   G + N+
Sbjct: 121 RQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNV 180

Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS--------EKGKTIA-- 569
                +L+AL     V+ A   +  M   G  PN  S  +V+S        ++G+ +A  
Sbjct: 181 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAER 240

Query: 570 -----------------------AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
                                   V+L+   + +    ++ SY  +++ L  +G+   A+
Sbjct: 241 FEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAF 300

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRG 649
           S+L +++++G   +  +   L+ G    G T  A D+ ++MIRG
Sbjct: 301 SLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRG 344


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 224/515 (43%), Gaps = 14/515 (2%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCIL---LDMPKKGVQWDEDMFEVLIESYGKKGIVQES 110
           H   + +   ++L  + K+ H   +L     M   GV  +     +LI S+     V  +
Sbjct: 60  HPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFA 119

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
             +   + +LG +    ++  L + +   G+   A   F+KM+ EG +P   TY  ++ G
Sbjct: 120 FSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLING 179

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
                    AIR    M+      DVV Y ++I+   + +++ EA  LF++M  + I P 
Sbjct: 180 LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 239

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           + +YT+++     +        + ++M +  + P+ V ++ ++  LC  GK+ E  +++ 
Sbjct: 240 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 299

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
            M++R + P D   +  L+   C    ++ A  V   M+R     +   Y  LI  +CK 
Sbjct: 300 MMIQRGVEP-DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 358

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
              D+A+ L +++  KE I         +  +YN ++  LCH G+   A   F +++ +G
Sbjct: 359 HKIDKAMYLFEEMCRKEWI--------PDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410

Query: 411 VL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
            + D V ++ L+    K  + + A  ++K +    +  D   Y  +I+   R GE   A+
Sbjct: 411 QMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 470

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
               ++   G  P+   +  ++  L + G +  A+++   M       +      I    
Sbjct: 471 DLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 530

Query: 530 LMRGHVEEALGRIDLMMQSG-SVPNFDSLLSVLSE 563
           L       A+  ++ M+  G S  +   +LSVLSE
Sbjct: 531 LQNNETLRAIQLLEEMLARGFSADSCFLMLSVLSE 565



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/468 (23%), Positives = 204/468 (43%), Gaps = 13/468 (2%)

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M   GV  +V + + L        R   A     K+L  G +P   T+  ++ G  +  K
Sbjct: 91  MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 150

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           +  A+  F+ M   G   +VVTY T+ING  +      A +L   M++ N +P V+ YT+
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 210

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I       +  +A  +F +M    + P+  TYT+L+  LC+  +   V  +L +MV   
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P D  +F  ++   CK G +  A +++  MI+  +  +   Y  L++  C     D A
Sbjct: 271 ILP-DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 329

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPV 415
           +K+ D +V K            +  SY  +I   C   +  KA   F ++ +K  + D  
Sbjct: 330 VKVFDMMVRK--------GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTK 381

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N L+ G    G    A  +   M  RG   D   Y  L++S  +     +A   L ++
Sbjct: 382 TYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAI 441

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
                +P   ++  +++ +   G ++ A  +  ++  KG+  ++     ++  L  RG +
Sbjct: 442 EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLL 501

Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            EA      M  +   P+   ++++     +  +T+ A++LL+  L R
Sbjct: 502 NEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 549



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/518 (20%), Positives = 222/518 (42%), Gaps = 13/518 (2%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + +++  F+ +  +    S+  +  L   I +   Y        +M S G+ P  +T N+
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++  F    ++  A      +   G   D  T+ T+I G     K+ EA  LF +M ++ 
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +P V++Y T+I G   V     A+R+   M+  + +P+ V YT+++  LC   ++ E  
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +  +MV + I P D   +  L+   C          +L  M+   I  +   +  +++ 
Sbjct: 226 NLFSQMVGQGISP-DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 284

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK      A +++D ++++ +        + +  +Y  ++   C   +  +A   F  +
Sbjct: 285 LCKEGKVTEAHEIVDMMIQRGV--------EPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 336

Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           ++KG   D +++  LI G+ K    D A  + + M R+    D   Y  L+      G  
Sbjct: 337 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRL 396

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
            DA      M+  G  P    +  +++SL ++  ++ A  ++K++    +  ++ +   I
Sbjct: 397 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNII 456

Query: 526 LEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           ++ +   G +E A      +   G   SV  ++ ++  L ++G    A KL     G DC
Sbjct: 457 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 516

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD 620
             D  +Y  +    L   +TL A  +L +++ +G   D
Sbjct: 517 SPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 195/447 (43%), Gaps = 14/447 (3%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I  L   GK+  A  +   M  +G Q +   +  LI    K G    ++++ 
Sbjct: 134 DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 193

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+Q   +  V  Y ++   + +  +   A   F++M+ +GI P   TY  ++      
Sbjct: 194 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 253

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + +        M +  I  DVV ++T+++   +  K+ EA ++   M ++ +EP V++Y
Sbjct: 254 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 313

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           TT++ G+      D+A+++FD M      P+ ++YT L+ G C   K+ +   +  EM  
Sbjct: 314 TTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCR 373

Query: 295 R-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           + +IP  D   +  L+   C  G L  A  +   M+      +   Y IL+++ CK    
Sbjct: 374 KEWIP--DTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHL 431

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
           + A+ LL K +E        S L+ +   YN +I  +C  G+   A   F  L  KG+  
Sbjct: 432 EEAMALL-KAIE-------ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHP 483

Query: 414 PV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
            V  +N +I G  K G  + A ++   M       D   Y  +   +L+  E   A   L
Sbjct: 484 SVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLL 543

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGR 499
           + M+  G S  S     ++  L ED R
Sbjct: 544 EEMLARGFSADSCFL--MLSVLSEDDR 568



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/474 (20%), Positives = 191/474 (40%), Gaps = 48/474 (10%)

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA-- 266
           F  +D+A   F  +   +  P+++ +  ++     ++     L +  +M SF V PN   
Sbjct: 43  FNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT 102

Query: 267 ---------------------------------VTYTALLPGLCDAGKMVEVQKVLREMV 293
                                             T+T L+ GLC  GK+ E   +  +M+
Sbjct: 103 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 162

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +    P +   +  L+   CK G+ +AA  +L++M + +   +   Y  +I++ CK    
Sbjct: 163 DEGFQP-NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
             A  L  ++V + I          +  +Y  ++  LC+  +         Q++   +L 
Sbjct: 222 TEAFNLFSQMVGQGI--------SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D V F+ ++    KEG    A EIV +M +RGV  D   Y  L++ +  + E  +A    
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 333

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D M+  G +P    + +++    +  ++  A  + + M  K    +      ++  L   
Sbjct: 334 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHV 393

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G +++A+     M+  G +P+   +  LL  L +      A+ LL      +   D+  Y
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
             ++D +  AG+   A  +   +  KG      + + +I GL + G   +A+ L
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 507



 Score = 39.3 bits (90), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 10/158 (6%)

Query: 9   RLQNKI--------RALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
           RLQ+ I        R  +P    ++++ + L   ++ E A+   + +E + L N D + +
Sbjct: 395 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL-NPDIQVY 453

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             +I+ + R G+L  AR +  ++  KG+      + ++I    K+G++ E+ K+F  M  
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 513

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
                   +Y+ + +  L+    + A +   +ML+ G 
Sbjct: 514 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/586 (21%), Positives = 257/586 (43%), Gaps = 55/586 (9%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV-QES 110
           F+ D   +  MI      G+   A  +   M + G +     + V++  YGK G+   + 
Sbjct: 196 FDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKM 255

Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           V + D MK  G+     +Y+ L     R   Y  A     +M   G  P + TYN +L  
Sbjct: 256 VGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDV 315

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           +  S + + A+   ++M+  G    +VTYN++I+ Y R   +++A +L  +M EK I+P 
Sbjct: 316 YGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPD 375

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V +YTT++ G+    +   A++IF+EM++   KPN  T+ AL+    + GK  E+ KV  
Sbjct: 376 VFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFE 435

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           ++      P D   +  LL V  ++G  +  + V K M R     E   +  LI ++ + 
Sbjct: 436 DIKTFQCSP-DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRC 494

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL---- 406
             +D+A+ +  +++E        + ++ + SSYN ++  L   G   ++E    ++    
Sbjct: 495 GSFDQAMAVYKRMLE--------AGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGR 546

Query: 407 ------------------------------MKKGVLDP--VAFNNLIRGHSKEG---NPD 431
                                         +  G+++P  V    L+  +SK       +
Sbjct: 547 CKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETE 606

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            AF  ++   +RG   D      ++  Y R+   A A   LD M   G +P+ + + S+M
Sbjct: 607 RAFLELR---QRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLM 663

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
                    + +  +++ ++ KG++ ++     ++ A    G + +A   +  M +SG  
Sbjct: 664 YMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPA 723

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           P+   +++ ++  +     + A+ ++ + +   C  + ++Y  ++D
Sbjct: 724 PDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVD 769



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 141/665 (21%), Positives = 276/665 (41%), Gaps = 101/665 (15%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKM--------IEILGRVGKLNHARCILLDMPKK 85
           K  + AL+ F WV       + +E+ L +        I ILG+ G+++ A  +L ++ K 
Sbjct: 141 KKCDTALRVFEWVR------NRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKD 194

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG-RYMM 144
           G   D   +  +I ++   G  +E+V +F  M+++G + ++ +Y+ +  +  + G  +  
Sbjct: 195 GFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNK 254

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
                ++M S GI P  +TYN ++         E A    ++MK  G S D VTYN +++
Sbjct: 255 MVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLD 314

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            Y + ++  EA ++  EM+     P++++Y ++I  Y      +DAL + ++M    +KP
Sbjct: 315 VYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKP 374

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           +  TYT LL G   AGK     ++  EM      P +   F  L+ +    G       V
Sbjct: 375 DVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKP-NICTFNALIKMHGNRGKFTEMMKV 433

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
            +                 I+ F                         Q + D+   ++N
Sbjct: 434 FED----------------IKTF-------------------------QCSPDI--VTWN 450

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            ++     NG   +    F+++ + G V +   FN LI  +S+ G+ D A  + K M   
Sbjct: 451 TLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEA 510

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR---- 499
           GV  D  +Y  ++ +  R G    ++  L  M +DG    + L    +   + +G+    
Sbjct: 511 GVNPDLSSYNAVLAALARGGLWKQSEKVLAEM-KDGRCKPNELTYCSLLHAYANGKEIER 569

Query: 500 ------------VQTASRVMKSMV--------------------EKGVKENLDLVAKILE 527
                       ++  + ++K++V                    ++G   ++  +  ++ 
Sbjct: 570 MCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVS 629

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
               R  V +A   +D M + G  P+   ++SL+ + S       + ++L   L +    
Sbjct: 630 IYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRP 689

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DIL 643
           D+ SY  V+ A    G+  +A  +L ++ E G   D  + +  IA    +    +A D++
Sbjct: 690 DIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVV 749

Query: 644 SRMIR 648
             MI+
Sbjct: 750 CYMIK 754



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 227/514 (44%), Gaps = 21/514 (4%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
            + +N + +        E A    + ++ AG F+ D+ T+  ++++ G+  +   A  +L
Sbjct: 271 SYTYNTLISCCRRGNLYEEAAGVLKEMKLAG-FSPDKVTYNALLDVYGKSRRSKEAMEVL 329

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M   G       +  LI +Y + G++++++++ + M + G++  V +Y  L     + 
Sbjct: 330 QEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKA 389

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G+   A + F +M +EG +P   T+N ++       K    ++ FED+K+   S D+VT+
Sbjct: 390 GKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTW 449

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           NT+++ + +     E   +F EMK     P   ++ T+I  Y      D A+ ++  M  
Sbjct: 450 NTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLE 509

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             V P+  +Y A+L  L   G   + +KVL EM +    P + +         C   H  
Sbjct: 510 AGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTY--------CSLLHAY 561

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE---IILRPQSTL 376
           A    ++ M  L+   E  + GI+       +         D L+E E   + LR Q   
Sbjct: 562 ANGKEIERMCALA---EEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELR-QRGF 617

Query: 377 DMEASSYNPMIQHLCHNGQTGKA-EIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSA 433
             + ++ N M+          KA EI     MK+G   P    +N+L+  +S+  N + +
Sbjct: 618 SPDITTLNAMVSIYGRRQMVAKANEIL--DCMKRGGFTPSLTTYNSLMYMYSRSANFERS 675

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            EI++ +  +G+  D  +Y  +I +Y R G   DA   L  M E G +P    + + + S
Sbjct: 676 EEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIAS 735

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
              D     A  V+  M++ G K N      I++
Sbjct: 736 YAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVD 769



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/405 (20%), Positives = 181/405 (44%), Gaps = 10/405 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  ++    + GK   A  I  +M  +G + +   F  LI+ +G +G   E +K+F+ +
Sbjct: 378 TYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDI 437

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K       + +++ L  +  + G        F +M   G  P R T+N ++  +      
Sbjct: 438 KTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSF 497

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+  ++ M   G++ D+ +YN ++    R     ++EK+ AEMK+   +P  ++Y ++
Sbjct: 498 DQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSL 557

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           +  Y   +  +    + +E+ S  ++P AV    L+        ++E ++   E+ +R  
Sbjct: 558 LHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGF 617

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D +    ++ +  +   +  A ++L  M R         Y  L+  + ++  ++R+ 
Sbjct: 618 SP-DITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSE 676

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVA 416
           ++L +++ K I  RP      +  SYN +I   C NG+   A     ++ + G   D + 
Sbjct: 677 EILREILAKGI--RP------DIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIIT 728

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           +N  I  ++ +     A ++V  M + G   +   Y  +++ Y +
Sbjct: 729 YNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCK 773



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 139/641 (21%), Positives = 246/641 (38%), Gaps = 90/641 (14%)

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK--IFDIMKQLGVERSVKSYDALFKLI 136
           L+D      Q DE + E+  +  G+     ES+   +  I+K LG  +   +   +F+ +
Sbjct: 94  LIDPTFNLAQIDELLLELFEQQPGESDFSVESLSLDVLGIVKGLGFYKKCDTALRVFEWV 153

Query: 137 LRR----------------------GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             R                      GR   A    + +  +G +   + Y  M+  F  +
Sbjct: 154 RNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSN 213

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK-KMDEAEKLFAEMKEKNIEPTVIS 233
            +   A+  F+ M+  G    ++TYN ++N Y +     ++   L   MK   I P   +
Sbjct: 214 GRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYT 273

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y T+I         ++A  +  EMK     P+ VTY ALL     + +  E  +VL+EM 
Sbjct: 274 YNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEME 333

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
               PP     +  L+    + G L  A ++   M+   I  +   Y  L+  F KA   
Sbjct: 334 GNGCPPSI-VTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKD 392

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK----- 408
             A+++ +++  +    +P         ++N +I+    +G  GK    F ++MK     
Sbjct: 393 KAAVQIFEEMRNEGC--KPN------ICTFNALIKM---HGNRGK----FTEMMKVFEDI 437

Query: 409 ---KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
              +   D V +N L+    + G       + K M R G   + D +  LI SY R G  
Sbjct: 438 KTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSF 497

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
             A      M+E G +P  S + +V+ +L   G  + + +V+  M +   K N      +
Sbjct: 498 DQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSL 557

Query: 526 LEALLMRGHVEEALG-------------------------RIDLMM----------QSGS 550
           L A      +E                             + DL+M          Q G 
Sbjct: 558 LHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGF 617

Query: 551 VPNFDSLLSVLSEKGK---TIAAVKLLDFCLGRDCII-DLASYEKVLDALLAAGKTLNAY 606
            P+  +L +++S  G+      A ++LD C+ R      L +Y  ++     +     + 
Sbjct: 618 SPDITTLNAMVSIYGRRQMVAKANEILD-CMKRGGFTPSLTTYNSLMYMYSRSANFERSE 676

Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRM 646
            IL +I+ KG   D  S + +I    + G  + A  +LS M
Sbjct: 677 EILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEM 717



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 92/183 (50%)

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
            L++ ++G   D      ++  YG++ +V ++ +I D MK+ G   S+ +Y++L  +  R
Sbjct: 609 FLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSR 668

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
              +  ++    ++L++GI P   +YN +++ +  + ++  A R   +M+  G + D++T
Sbjct: 669 SANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIIT 728

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YNT I  Y       EA  +   M +   +P   +Y +++  Y  + R D+A    + ++
Sbjct: 729 YNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLR 788

Query: 259 SFD 261
             D
Sbjct: 789 KLD 791


>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 567

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 220/464 (47%), Gaps = 31/464 (6%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK-------KGV 87
           N + +L+FF+   +   F  D  ++ K++ IL R       R  L ++            
Sbjct: 111 NPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASA 170

Query: 88  QWDE------------DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL 135
            WDE             +F+++++ Y +KG+ + ++ +FD M + G   S++S ++L   
Sbjct: 171 VWDELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSN 230

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
           +++ G    A   + +M++ GI P   +Y +M+  +    +++ A  F ++M+      +
Sbjct: 231 LVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPN 290

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           VVTYN++I+GY     +  A+K+ A M EK I     +YT +IKGY    + + A ++F 
Sbjct: 291 VVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFG 350

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCK 314
            M   ++  +   Y  L+   C AG++ +  ++   M++  +  K N+V    L+   CK
Sbjct: 351 CMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLK--VGLKMNTVICNSLINGYCK 408

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            GH+N AA+VL +M   ++  ++  Y  L++ FCK E + +A KL D++  K +      
Sbjct: 409 LGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGV------ 462

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
             +    +YN ++++L H G    A   +  + K+GV  + V +  L+    K G  D A
Sbjct: 463 --NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
             I K    +G  +    Y  +I  + +  +   A+     M E
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 166/403 (41%), Gaps = 15/403 (3%)

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           ++L +  +E +  PTV  +  ++K Y        AL +FD M      P+  +  +LL  
Sbjct: 173 DELVSVYREFSFSPTV--FDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSN 230

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           L   G+  +   V  +M+   I P D   +  ++   CK G ++ A + +K M R     
Sbjct: 231 LVQNGEAFKALLVYEQMIALGILP-DIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEP 289

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  LI+ +        A K+L  + EK I   P+++      +Y  +I+  C  GQ
Sbjct: 290 NVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGI---PENS-----RTYTLLIKGYCKRGQ 341

Query: 396 TGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +AE  F  +M+K + +D   +  LI  +   G  D A  I   M + G+  +      
Sbjct: 342 MEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNS 401

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI  Y + G    A   L SM +    P S  + ++++   +      A ++   M  KG
Sbjct: 402 LINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKG 461

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
           V   +     +L+ L   GHVE AL   +LM + G  PN   + +LL    + G    A+
Sbjct: 462 VNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAM 521

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            +    L +     +  Y  ++       K + A  I  K+ E
Sbjct: 522 MIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 113/243 (46%), Gaps = 7/243 (2%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKI 439
           SY  M+   C  G+  +A  F ++ M++   +P  V +N+LI G+   G+   A +++ +
Sbjct: 258 SYTIMVNAYCKEGRVDEAFNFVKE-MERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLAL 316

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  +G+P ++  Y  LI+ Y ++G+   A+     M+E        ++  ++ +    GR
Sbjct: 317 MSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGR 376

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
           V  A R+  +M++ G+K N  +   ++      GHV +A   +  M      P+   +++
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNT 436

Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           LL    ++   I A KL D    +     + +Y  +L  L   G   +A  I + +M K 
Sbjct: 437 LLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHI-WNLMHKR 495

Query: 617 GVT 619
           GV 
Sbjct: 496 GVA 498



 Score = 43.5 bits (101), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 39/189 (20%), Positives = 74/189 (39%), Gaps = 32/189 (16%)

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           +++ Y  KG    A    D+M + G  P+     S++ +L ++G    A  V + M+  G
Sbjct: 192 ILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALG 251

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
           +  ++     ++ A    G V+EA   +  M +S   PN                     
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPN--------------------- 290

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
                      + +Y  ++D  ++ G    A  +L  + EKG   + ++   LI G  + 
Sbjct: 291 -----------VVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKR 339

Query: 635 GNTKQADIL 643
           G  +QA+ L
Sbjct: 340 GQMEQAEKL 348


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 226/502 (45%), Gaps = 51/502 (10%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + VLI    ++G+ +++ ++   M+  G+  S   ++ + K +L    +  A   F +M 
Sbjct: 320 YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMA 379

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             GI P   TYN+++       K+  A+  +E M   G+   +VTY++++  Y     MD
Sbjct: 380 DSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMD 438

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA KL+ EM  K   P V++YTT++KG++     D A  +  EMK   V  N  TY  L+
Sbjct: 439 EAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLI 498

Query: 274 PGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
            GLC  G++ EV ++L+    E ++P      +  ++    K+G + +A  V + M    
Sbjct: 499 NGLCVVGRVCEVGEMLKRFETEGFVPTA--MTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           IP     Y   I+ +CK    D A+K+L+ +  K   LRP                    
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG--LRP-------------------- 594

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
                               D  A+N+LI G  +EGN   A +++ +M + G+  +   Y
Sbjct: 595 --------------------DIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
              I  Y       +A    + MI++G    ++ + ++++   +DG V  A ++   MV 
Sbjct: 635 NSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVA 694

Query: 513 KG-VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           KG + +++   A +   L   G +++A   +D M +    PN   ++ L++     GK  
Sbjct: 695 KGNIPDHITFTA-LTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQ 753

Query: 569 AAVKLLDFCLGRDCIIDLASYE 590
            A +L D  L R  + D  +Y+
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYD 775



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/513 (22%), Positives = 222/513 (43%), Gaps = 50/513 (9%)

Query: 1   MAERAWTTRLQNKIRALVPQFDH-NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
           M E+A+    Q +   L+P  +  N+V   L   K  + A+  F+ +  +G+   D  T+
Sbjct: 332 MPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI--PDAFTY 389

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             +I  L +  K+  A  +   M + GV+     +  L+  Y   G + E+VK++  M  
Sbjct: 390 NILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPG 449

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G   +V +Y  L K  + +  +  A     +M   G+    +TYN ++ G  +  ++  
Sbjct: 450 KGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCE 509

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
                +  ++ G     +TYN++ING+ +   M  A  ++ +M  K I P +++YT+ I 
Sbjct: 510 VGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID 569

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY      D AL++ ++++   ++P+   Y +L+ G C  G M    +VL  M++  + P
Sbjct: 570 GYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLP 629

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
                                          +S+      Y   I  +   +M + A++ 
Sbjct: 630 N------------------------------ISV------YNSFITGYKNLKMMEEALRF 653

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFN 418
            +K++++ I        D++ ++Y  +I     +G    A   + +++ KG + D + F 
Sbjct: 654 YEKMIKEGI--------DLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFT 705

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L  G  + G+ D A +++  M R  +  +   Y  LI  YLR G+  +A    D M+E 
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765

Query: 479 GHSPASSLFRSV--MESLFEDGRVQTASRVMKS 509
              P  + +  +  M+SL  D  +   +  + S
Sbjct: 766 KIMPDDTTYDILVGMKSLGSDSPIDAENPNLSS 798



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 123/564 (21%), Positives = 229/564 (40%), Gaps = 53/564 (9%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           +D + +   + G Y  A R F++M +  IEP +   +V +           A+     M+
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             G      T+N++++   +  +M+EA  +  E+     + +V+  TT++ GY       
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            AL IF+E     + P  VTYT L+ G  + G   +  ++ R+M +  + P  N   M +
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
            G+         A  + K M    IP +A  Y ILI   C+      A+ L +K+ E  +
Sbjct: 360 KGLL-NDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
             +P         +Y+ ++   C NG   +A   + ++  KG   + V +  L++GH  +
Sbjct: 418 --KPYIV------TYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINK 469

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
              D A+ ++  M + GV  +   Y  LI      G   +    L     +G  P +  +
Sbjct: 470 AAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTY 529

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENL----------------DLVAKILE---- 527
            S++    + G + +A  V + M  KG+  N+                DL  K+L     
Sbjct: 530 NSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC 589

Query: 528 ---------------ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
                               G++  AL  + LM++ G +PN   ++S ++          
Sbjct: 590 KGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEE 649

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A++  +  +     +D A+Y  ++D     G    A  +  +++ KG + D  +   L  
Sbjct: 650 ALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTH 709

Query: 630 GLNQEGNTKQADILSRMIRGEMSR 653
           GL + G+   A    R +  EM+R
Sbjct: 710 GLCRNGDIDDA----RKLLDEMNR 729



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/461 (20%), Positives = 183/461 (39%), Gaps = 18/461 (3%)

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+ +G  LD   ++ ++    +    D+A +LF EM    IEP     +  I     + 
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
            A+ AL +  +M+     P   T+ +++  L   G+M E   +  E++      K  SV 
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLAT---GKKMSVV 283

Query: 306 M--KLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           +   L+   C    +  A D+ +  +R   +PT+   Y +LI    +  M ++A +L  +
Sbjct: 284 LATTLMHGYCLQREVRKALDIFEETLRDGLVPTDV-TYTVLIRGCTEEGMPEKAYELCRQ 342

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIR 422
           + +  ++  P +      + +N +I+ L ++     A   F+++   G+ D   +N LI 
Sbjct: 343 MRDHGLL--PST------NEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIH 394

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
              +      A  + + M   GV      Y  L+  Y   G   +A      M   G +P
Sbjct: 395 WLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTP 454

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               + ++M+          A  ++  M + GV  N      ++  L + G V E    +
Sbjct: 455 NVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEML 514

Query: 543 DLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
                 G VP    ++S+++   + G   +A  +      +    ++ +Y   +D     
Sbjct: 515 KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT 574

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
                A  +L  +  KG   D  + + LI G  QEGN   A
Sbjct: 575 SCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHA 615


>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/578 (24%), Positives = 250/578 (43%), Gaps = 59/578 (10%)

Query: 8   TRLQNKIRALVPQFDHNLVYNVLHGAKNSEH---ALQFFRWVERAGLFNHDRETHLKMIE 64
           + L    R  + +   N V  VL   +  E    A  FF W  +   + H+ E ++ +++
Sbjct: 83  SNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVD 142

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           +L     ++  R +  ++ K            LI+S+GK G+V+E + ++  MK+ G+  
Sbjct: 143 VLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGI-- 200

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
                                            EPT +TYN ++ G   ++ +++A R F
Sbjct: 201 ---------------------------------EPTLYTYNFLMNGLVSAMFVDSAERVF 227

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           E M+S  I  D+VTYNTMI GY +  +  +A +   +M+ +  E   I+Y TMI+   A 
Sbjct: 228 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 287

Query: 245 ERADDALRIFDEM--KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                 + ++ EM  K   V P+A  ++ ++ GLC  GK+ E   V   M+ +   P + 
Sbjct: 288 SDFGSCVALYQEMDEKGIQVPPHA--FSLVIGGLCKEGKLNEGYTVFENMIRKGSKP-NV 344

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           +++  L+    KSG +  A  +L  MI      +   Y +++   CK    + A+     
Sbjct: 345 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 404

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
                        L + +  Y+ +I  L   G+  +AE  F ++ +KG   D   +N LI
Sbjct: 405 C--------RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALI 456

Query: 422 RGHSKEGNPDSAFEIVKIM-GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
              +K    D A  + K M    G  +    Y  L+    ++    +A    D MI+ G 
Sbjct: 457 DAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGI 516

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK-ILEALLMRGHVEEAL 539
           +P ++ FR++   L   G+V  A +++  +   GV   LD   + ++  L   G ++EA 
Sbjct: 517 TPTAACFRALSTGLCLSGKVARACKILDELAPMGVI--LDAACEDMINTLCKAGRIKEAC 574

Query: 540 GRIDLMMQSG-SVPN--FDSLLSVLSEKGKTIAAVKLL 574
              D + + G  VP      +++ L + GK   A+KL+
Sbjct: 575 KLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 612



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 133/316 (42%), Gaps = 14/316 (4%)

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           +   P        LI++F K  M +  + +  K+ E  I    + TL     +YN ++  
Sbjct: 162 KFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGI----EPTL----YTYNFLMNG 213

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
           L        AE  F ++M+ G + P  V +N +I+G+ K G    A E ++ M  RG   
Sbjct: 214 LVSAMFVDSAERVF-EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEA 272

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y+ +I++     +          M E G       F  V+  L ++G++     V 
Sbjct: 273 DKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVF 332

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           ++M+ KG K N+ +   +++     G VE+A+  +  M+  G  P+   +  +++ L + 
Sbjct: 333 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 392

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G+   A+     C      I+   Y  ++D L  AG+   A  +  ++ EKG   D    
Sbjct: 393 GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 452

Query: 625 DKLIAGLNQEGNTKQA 640
           + LI    +     +A
Sbjct: 453 NALIDAFTKHRKVDEA 468


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 126/559 (22%), Positives = 243/559 (43%), Gaps = 47/559 (8%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V +      +   A   F+ + + G+   D  T+  ++  L +   ++ A   L  M
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDFVTYSSVVHALCKARAMDKAEAFLRQM 280

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
             KGV  +   +  LI  Y   G  +E+V++F  M++  +   V +++ L   + + G+ 
Sbjct: 281 VNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKI 340

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A+  F+ M  +G  P   +YN+ML G+     L      F+ M   GI+  + T+N +
Sbjct: 341 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVL 400

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I  Y     +D+A  +F EM++  ++P V++YTT+I     + + DDA+  F++M    V
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVE---------------------RYIPPKD 301
            P+   Y  L+ G C  G +++ ++++ E++                      R +  ++
Sbjct: 461 APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQN 520

Query: 302 -------------NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                          V+  L+   C  G +  A  V  AM+   I      YG L+  +C
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K    D  + L  ++++K I  +P + L      YN +I  L   G+T  A++ F ++ +
Sbjct: 581 KIGRIDEGLSLFREMLQKGI--KPSTIL------YNIIIDGLFEAGRTVPAKVKFHEMTE 632

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G+ ++   ++ ++RG  K    D A  + K +    V  D      +I    +     +
Sbjct: 633 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 692

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           AK    S+   G  P    +  ++ +L ++G V+ A  +  SM   G + +  L+  ++ 
Sbjct: 693 AKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 752

Query: 528 ALLMRGHVEEA---LGRID 543
            LL +  +  A   L +ID
Sbjct: 753 ELLKKNEIVRAGAYLSKID 771



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 135/611 (22%), Positives = 259/611 (42%), Gaps = 50/611 (8%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           GK   A  +L  M + G     D+  +  +I+ + K+G V ++  +F  M Q G+     
Sbjct: 196 GKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFV 255

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y ++   + +      A+ +  +M+++G+ P   TYN +++G+  + + + A+R F++M
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 188 KSRGISLDVVT-----------------------------------YNTMINGYNRFKKM 212
           + + I  DVVT                                   YN M+NGY     +
Sbjct: 316 RRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 375

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            +   LF  M    I P + ++  +IK Y      D A+ IF+EM+   VKPN +TYT +
Sbjct: 376 VDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTV 435

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  GKM +  +   +M+++ + P D   +  L+   C  G L  A +++  ++   
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           +  +   +  +I N CK      A  + D  V   + L P + +      Y+ ++   C 
Sbjct: 495 MHLDIVLFSSIINNLCKLGRVMDAQNIFDLTV--NVGLHPTAVV------YSMLMDGYCL 546

Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+  KA   F  ++  G+  + V +  L+ G+ K G  D    + + M ++G+      
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  +I+     G    AK     M E G +     +  V+  LF++     A  + K + 
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 666

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTI 568
              VK ++  +  ++  +     VEEA      + +SG VP    +  +++ L ++G   
Sbjct: 667 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726

Query: 569 AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
            A  +        C  D      V+  LL   + + A + L KI E+    +  ++  L+
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786

Query: 629 AGLNQEGNTKQ 639
              + +G  ++
Sbjct: 787 DLFSSKGTCRE 797



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 133/580 (22%), Positives = 238/580 (41%), Gaps = 75/580 (12%)

Query: 144 MAKRYFNKMLSEG-----IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
           +A   FN+  S       + PT HTY +++     + + E A+ FF  +   G+ +D++ 
Sbjct: 89  LAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIII 148

Query: 199 YNTMINGYNRFKKMDE------------------------------------AEKLFAEM 222
            N ++ G+   K+ DE                                    A+ L   M
Sbjct: 149 ANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMM 208

Query: 223 KEKN--IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
            E      P V++Y T+I G+      + A  +F EM    + P+ VTY++++  LC A 
Sbjct: 209 AEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
            M + +  LR+MV + + P +N  +  L+     +G    A  V K M R SI  +   +
Sbjct: 269 AMDKAEAFLRQMVNKGVLP-NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTF 327

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEK---------EIILRPQST----LDME-------- 379
            +L+ + CK      A  + D +  K          I+L   +T    +DM         
Sbjct: 328 NMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 387

Query: 380 ------ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDS 432
                   ++N +I+   + G   KA I F ++   GV   V  +  +I    + G  D 
Sbjct: 388 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDD 447

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A E    M  +GV  D  AY CLI+ +   G    AK  +  ++ +G      LF S++ 
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIIN 507

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
           +L + GRV  A  +    V  G+     + + +++   + G +E+AL   D M+ +G  P
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567

Query: 553 N---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           N   + +L++   + G+    + L    L +        Y  ++D L  AG+T+ A    
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
            ++ E G   +  +   ++ GL +     +A  L + +R 
Sbjct: 628 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 667



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 120/227 (52%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
           VGK+  A  +   M   G++ ++ ++  L+  Y K G + E + +F  M Q G++ S   
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y+ +   +   GR + AK  F++M   GI   + TY+++L G F +   + AI  F++++
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 666

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           +  + +D++T NTMI G  + ++++EA+ LFA +    + P V++Y+ MI   +     +
Sbjct: 667 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           +A  +F  M++   +P++     ++  L    ++V     L ++ ER
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 773


>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           [Oryza sativa Japonica Group]
          Length = 580

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 189/402 (47%), Gaps = 24/402 (5%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M  + V  D      L+ +  K  +   + K+FD M + GV  +   Y+A+  + L+ G 
Sbjct: 136 MRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGD 195

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
             +A+    +M + G+   R ++N ++  +        A+   E M+++G+  DVVT+N+
Sbjct: 196 AALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNS 255

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I+G  + +++ EA +L  EM    + P  ++YTT++ GY      ++A+++  EM++  
Sbjct: 256 LIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMG 315

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P   TY A+L  LC+ GKM EV  +L EM ER +   D+     L+   CK G + +A
Sbjct: 316 MLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKV-QADHVTCNTLINAYCKRGDMTSA 374

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             V + M+   +  +   Y  L+  FCKA+  D A + L                +M  +
Sbjct: 375 LKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEAL---------------FEMMGA 419

Query: 382 SYNP-------MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
            ++P       ++  LC+            +LMK+G   D   + +LIR   K+G  D A
Sbjct: 420 GFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLA 479

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
             +   M  +G+  D   Y  L  +YL  G+P  A   L+ M
Sbjct: 480 GNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEM 521



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/429 (21%), Positives = 177/429 (41%), Gaps = 51/429 (11%)

Query: 39  ALQFFRWVERAGLFNHDRETHL--KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           A + F  + RAG+      TH+   M+ +  + G    A  ++  M   GV  D   F  
Sbjct: 164 ARKVFDQMTRAGV---AMNTHVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNT 220

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I  Y +KG+  E++ + + M+  GV+  V ++++L   + +  R   A +   +M   G
Sbjct: 221 VIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAG 280

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRF--------------------------------- 183
           + P   TY  ++ G+  +  LE A++                                  
Sbjct: 281 VAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVN 340

Query: 184 --FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M  R +  D VT NT+IN Y +   M  A K+   M E  ++    +Y  ++ G+
Sbjct: 341 VLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGF 400

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +  D+A     EM      PN    + ++ GLC+    V V  +  E+++R  PP D
Sbjct: 401 CKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPP-D 459

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +V+  L+   CK G ++ A +V   M    +  +   Y  L   +  A     A+ +L+
Sbjct: 460 KAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILN 519

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
           ++ +K++ + PQ         YN M     +  + G   + +   +++G++    +  + 
Sbjct: 520 EMAKKQLYITPQ--------IYNCMCTS--YADEKGSLNMLWVHAIERGLITKSVYKVMH 569

Query: 422 RGHSKEGNP 430
           +   K  NP
Sbjct: 570 QARMKSSNP 578



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/402 (22%), Positives = 170/402 (42%), Gaps = 10/402 (2%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A R F+ M +  + P  H  + +L     S    TA + F+ M   G++++   YN M++
Sbjct: 129 ALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLH 188

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              +      AE L   M    +     S+ T+I  Y       +A+ + + M++  VK 
Sbjct: 189 VCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKA 248

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           + VT+ +L+ GLC   ++ E  ++LREM    + P D+  +  L+   C++G L  A  +
Sbjct: 249 DVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAP-DHVTYTTLVDGYCRAGDLEEAVKL 307

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
              M  + +      Y  ++   C+         LL+++ E+++          +  + N
Sbjct: 308 RGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKV--------QADHVTCN 359

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I   C  G    A    R++M+ G+ LD   +  L+ G  K    D A E +  M   
Sbjct: 360 TLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGA 419

Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
           G   +      +++    K          D +++ G  P  +++RS++  L + G +  A
Sbjct: 420 GFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLA 479

Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
             V   M  KG++ +  + A +  A L  G    AL  ++ M
Sbjct: 480 GNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEM 521



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 45/305 (14%)

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           R  DALR+FD M++ +V P+A   +ALL  L  +      +KV  +M    +   +  V+
Sbjct: 125 RPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVA-MNTHVY 183

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             +L V  K+G    A  ++  M    +P                         LD+   
Sbjct: 184 NAMLHVCLKAGDAALAESLMTRMDAAGVP-------------------------LDRF-- 216

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGH 424
                           S+N +I   C  G   +A     ++  +GV  D V +N+LI G 
Sbjct: 217 ----------------SFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGL 260

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            KE     A ++++ M   GV  D   Y  L++ Y R G+  +A      M   G  P  
Sbjct: 261 CKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGV 320

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
           + + +++  L EDG+++  + ++  M E+ V+ +      ++ A   RG +  AL     
Sbjct: 321 ATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRR 380

Query: 545 MMQSG 549
           MM+SG
Sbjct: 381 MMESG 385



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 123/280 (43%), Gaps = 12/280 (4%)

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A+++ D +  +E++       D  ASS   ++  L  +  T  A   F Q+ + GV ++ 
Sbjct: 129 ALRVFDHMRAREVVP------DAHASSA--LLTALAKSRMTATARKVFDQMTRAGVAMNT 180

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             +N ++    K G+   A  ++  M   GVP D  ++  +I  Y RKG   +A    + 
Sbjct: 181 HVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRER 240

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M   G       + S++  L ++ RV+ AS++++ M   GV  +      +++     G 
Sbjct: 241 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGD 300

Query: 535 VEEAL---GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +EEA+   G ++ M     V  ++++L  L E GK      LL+    R    D  +   
Sbjct: 301 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT 360

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
           +++A    G   +A  +  ++ME G   D  +   L+ G 
Sbjct: 361 LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGF 400



 Score = 42.7 bits (99), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 4/190 (2%)

Query: 20  QFDH---NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           Q DH   N + N      +   AL+  R +  +GL   D+ T+  ++    +  +L+ A+
Sbjct: 352 QADHVTCNTLINAYCKRGDMTSALKVKRRMMESGL-QLDQFTYKALVHGFCKAKELDEAK 410

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
             L +M   G   +  +   +++    K      + I D + + G       Y +L + +
Sbjct: 411 EALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRL 470

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            ++G   +A   FN+M  +G+E     Y  +   +  + K   A+    +M  + + +  
Sbjct: 471 CKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYITP 530

Query: 197 VTYNTMINGY 206
             YN M   Y
Sbjct: 531 QIYNCMCTSY 540


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 217/454 (47%), Gaps = 25/454 (5%)

Query: 64  EILGRVGKLNHARCIL---LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +ILG + K  H   +L     M  +G+  +   F +LI  + + G++  +  +   + ++
Sbjct: 73  KILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKM 132

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G E  + + +   K    +G+   A  + +K+++ G    + +Y  ++ G     +   A
Sbjct: 133 GYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAA 192

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           ++    +  + + L+ V YNT+I+G ++ K +++A  L++EM  K I P V++Y+ +I+G
Sbjct: 193 LQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRG 252

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +  V +  DA+ +F++M   ++KP+  T+  L+ G C  G++ + + VL  M+ + I P 
Sbjct: 253 FFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKP- 311

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           + S F  L+   CK   +     V   M++  I      Y  L++ +C  +  ++A K+ 
Sbjct: 312 NVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIF 371

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           + + ++ +             SYN MI   C   +  KA   F ++  K ++ D V +N+
Sbjct: 372 NTMSQRGV--------TANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNS 423

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  K G    AF++V  M  RG P +   Y  ++ + L K            + + G
Sbjct: 424 LIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTK------------LKDQG 471

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
             P       +++ L + G+++ A +V + ++ K
Sbjct: 472 IQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 179/373 (47%), Gaps = 22/373 (5%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
             AL F   +   G F+ D+ ++  +I  L +VG+   A  +L  +  K VQ +  M+  
Sbjct: 155 HQALNFHDKLVALG-FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNT 213

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I+   K   V ++  ++  M    +   V +Y AL +     G+   A   FNKM+ E 
Sbjct: 214 VIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILEN 273

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I+P  +T+N+++ GF    +L+ A    + M  + I  +V T+NT+++G+ + +KM E +
Sbjct: 274 IKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGK 333

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +FA M ++ I+P V++Y +++ GY  V++ + A +IF+ M    V  N  +Y  ++ G 
Sbjct: 334 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGF 393

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C   K+ +  K+  EM  ++I P D   +  L+   CKSG ++ A  ++  M     P  
Sbjct: 394 CKIKKVDKAMKLFIEMHHKHIIP-DVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPN 452

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  ++              LL KL ++ I  +P    D        +I+ LC +G+ 
Sbjct: 453 IITYNSILN------------ALLTKLKDQGI--QPNMHTD------TILIKGLCQSGKL 492

Query: 397 GKAEIFFRQLMKK 409
             A   F  L+ K
Sbjct: 493 EAARKVFEDLLVK 505



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 164/332 (49%), Gaps = 23/332 (6%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q  +  + N L     +  ALQ  R V+   L   +   +  +I+ + +   +N A  + 
Sbjct: 173 QVSYGTLINGLCKVGETRAALQLLRRVD-GKLVQLNAVMYNTVIDGMSKDKHVNDAFDLY 231

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M  K +  D   +  LI  +   G +++++ +F+ M    ++  V +++ L     + 
Sbjct: 232 SEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKE 291

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           GR   AK   + M+ + I+P   T+N ++ GF    K++     F  M  +GI  +VVTY
Sbjct: 292 GRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTY 351

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            ++++GY   K++++A+K+F  M ++ +   V SY  MI G+  +++ D A+++F EM  
Sbjct: 352 CSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHH 411

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK---DNSVFMKLL------G 310
             + P+ VTY +L+ GLC +GK+    +++ EM +R  PP     NS+   LL      G
Sbjct: 412 KHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQG 471

Query: 311 VQ-------------CKSGHLNAAADVLKAMI 329
           +Q             C+SG L AA  V + ++
Sbjct: 472 IQPNMHTDTILIKGLCQSGKLEAARKVFEDLL 503



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/470 (22%), Positives = 199/470 (42%), Gaps = 60/470 (12%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A   FN +L +    T   +N +L     S    T +   + M+  GI+ + VT+N +IN
Sbjct: 52  AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILIN 111

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
            + +   +  A  + A++ +   EP +I+  T IKG+    +   AL   D++ +     
Sbjct: 112 CFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 171

Query: 265 NAVTYTALLPGLCDA--------------GKMVEVQKVL--------------------- 289
           + V+Y  L+ GLC                GK+V++  V+                     
Sbjct: 172 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLY 231

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            EMV + I P D   +  L+      G L  A D+   MI  +I  +   + IL++ FCK
Sbjct: 232 SEMVAKRISP-DVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 290

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
                +A  +LD ++ ++I  +P        S++N ++   C + +  + +  F  +MK+
Sbjct: 291 EGRLKKAKNVLDMMMIQDI--KP------NVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQ 342

Query: 410 GV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G+  + V + +L+ G+      + A +I   M +RGV  +  +Y  +I  + +  +   A
Sbjct: 343 GIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKA 402

Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
                 M      P    + S+++ L + G++  A +++  M ++G   N+     IL A
Sbjct: 403 MKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNA 462

Query: 529 LLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLD 575
           LL +            +   G  PN  +   L+  L + GK  AA K+ +
Sbjct: 463 LLTK------------LKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFE 500



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 98/494 (19%), Positives = 210/494 (42%), Gaps = 23/494 (4%)

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
           +  F  LK+  +I F   ++      + + Y+++   ++    +D A  LF  +  +N  
Sbjct: 12  FNLFNFLKIPISISFLILLQK-----NFIPYSSISTTFHS-NDVDGAVSLFNSLLHQNPT 65

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
            T   +  ++   V  +     L +  +M+   + PN VT+  L+   C  G +     V
Sbjct: 66  LTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSV 125

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           L ++++    P   ++   + G  C  G ++ A +    ++ L    +   YG LI   C
Sbjct: 126 LAKILKMGYEPDIITLNTFIKGF-CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLC 184

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K      A++LL ++  K +         + A  YN +I  +  +     A   + +++ 
Sbjct: 185 KVGETRAALQLLRRVDGKLV--------QLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVA 236

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           K +  D V ++ LIRG    G    A ++   M    +  D   +  L++ + ++G    
Sbjct: 237 KRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKK 296

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           AK  LD M+     P  S F ++++   +D +++    V   M+++G+K N+     +++
Sbjct: 297 AKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMD 356

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
              +   V +A    + M Q G   N   ++ +++   +  K   A+KL      +  I 
Sbjct: 357 GYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIP 416

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKG---GVTDWKSS-DKLIAGLNQEGNTKQA 640
           D+ +Y  ++D L  +GK   A+ ++ ++ ++G    +  + S  + L+  L  +G     
Sbjct: 417 DVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNM 476

Query: 641 DILSRMIRGEMSRG 654
              + +I+G    G
Sbjct: 477 HTDTILIKGLCQSG 490


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/519 (23%), Positives = 232/519 (44%), Gaps = 53/519 (10%)

Query: 64  EILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +IL  + KLNH    +     M  K +Q D   F +LI  +   G +  +  +   + +L
Sbjct: 69  KILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKL 128

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G      +   L K +   G+   A  + + ++++G    + +Y  ++ G   + +   A
Sbjct: 129 GFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAA 188

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           ++    +    +  +VV YNT+I+   + K +  A  L +EM  K I P V++YTT+I G
Sbjct: 189 LQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYG 248

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
            + V R  +A+ +F++M   ++KP+  T+  L+ GLC  G+M + + VL  M+++ +   
Sbjct: 249 CLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGV--- 305

Query: 301 DNSV--FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           D+++  +  L+         N A  V   M R  +  +   Y I+I   CK +M D A+ 
Sbjct: 306 DSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVN 365

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFN 418
           L                 +M + S  P                           + V +N
Sbjct: 366 LFK---------------EMHSKSMAP---------------------------NTVTYN 383

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
           +LI G  K G    A+++V  M  RG P D   Y  L+++  +  +   A T +  + + 
Sbjct: 384 SLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQ 443

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G  P    +  +++ L ++GR++ A  V + ++ KG   ++ +   ++  L   G  +EA
Sbjct: 444 GIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEA 503

Query: 539 LGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           L  +  M  +G +P+   +++L+  L E  K   AVKLL
Sbjct: 504 LSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLL 542



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 227/488 (46%), Gaps = 12/488 (2%)

Query: 11  QNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
           Q +++ + P  F  N++ N      +   A      + + G F+ D  T   +I+ L   
Sbjct: 89  QMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLG-FHPDTVTITTLIKGLCLN 147

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           GK+  A     D+  KG   D+  +  LI    K G  + ++++   +  L V+ +V  Y
Sbjct: 148 GKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMY 207

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + +   + +    + A    ++M+ + I P   TY  +++G  +  +L+ A+  F  M  
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL 267

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           + I  DV T+N +++G  +  +M +A  + A M ++ ++  +++Y +++ GY  V++ + 
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A  +F+ M    V P+  +Y+ ++ GLC    + E   + +EM  + + P +   +  L+
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAP-NTVTYNSLI 386

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
               K G ++ A D++  M     P +   Y  L++  CK    D+AI L+ K+ ++ I 
Sbjct: 387 DGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI- 445

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
            +P         +Y  ++  LC NG+   A+  ++ L+ KG  LD   +N ++ G  KEG
Sbjct: 446 -QP------NIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEG 498

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
             D A  +V  M   G   DA  Y  L+ +     +   A   L  MI  G +  S++  
Sbjct: 499 LFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISS 558

Query: 489 SVMESLFE 496
           + M  +++
Sbjct: 559 NSMLCVYQ 566



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 115/496 (23%), Positives = 221/496 (44%), Gaps = 42/496 (8%)

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           ++  + +++ L       G    A     K+   G  P   T   ++ G  L+ K+  A+
Sbjct: 95  IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREAL 154

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            F +D+ ++G  LD V+Y T+ING  +  +   A ++  ++    ++P V+ Y T+I   
Sbjct: 155 HFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSL 214

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
              +    A  +  EM    + P+ VTYT L+ G    G++ E   +  +M+ + I P D
Sbjct: 215 CKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKP-D 273

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              F  L+   CK G +  A +VL  MI+  + +    Y  L++ +   +  ++A  + +
Sbjct: 274 VYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFN 333

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
            +  + +      T D++  SY+ MI  LC      +A   F+++  K +  + V +N+L
Sbjct: 334 TMARRGV------TPDVQ--SYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSL 385

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  K G    A+++V  M  RG P D   Y  L+++  +  +   A T +  + + G 
Sbjct: 386 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI 445

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    +  +++ L ++GR++ A  V + ++ KG   ++ +   ++  L   G  +EAL 
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEAL- 504

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
                          SL+S + + G                CI D  +YE ++ AL    
Sbjct: 505 ---------------SLVSKMEDNG----------------CIPDAVTYETLVRALFEND 533

Query: 601 KTLNAYSILFKIMEKG 616
           K   A  +L +++ +G
Sbjct: 534 KNDKAVKLLREMIVQG 549



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/456 (21%), Positives = 199/456 (43%), Gaps = 14/456 (3%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           +  +N +++   +      A     +M+ K I+P + ++  +I  +  +   + A  +  
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           ++      P+ VT T L+ GLC  GK+ E      +++ +     D   +  L+   CK+
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGF-HLDQVSYGTLINGLCKT 182

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G   AA  VL+ +  L +      Y  +I++ CK ++   A  L  +++ K I   P   
Sbjct: 183 GETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIF--P--- 237

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
              +  +Y  +I      G+  +A   F Q++ K +  D   FN L+ G  KEG    A 
Sbjct: 238 ---DVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKAR 294

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            ++ +M ++GV  +   Y  L++ Y    +   A    ++M   G +P    +  ++  L
Sbjct: 295 NVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGL 354

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM---QSGSV 551
            +   V  A  + K M  K +  N      +++ LL  G + +A   ++ M    Q   V
Sbjct: 355 CKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADV 414

Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             + SLL  L +  +   A+ L+     +    ++ +Y  ++D L   G+  +A ++   
Sbjct: 415 ITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQD 474

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
           ++ KG   D K  + ++ GL +EG   +A  ++S+M
Sbjct: 475 LLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKM 510


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 226/502 (45%), Gaps = 51/502 (10%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + VLI    ++G+ +++ ++   M+  G+  S   ++ + K +L    +  A   F +M 
Sbjct: 320 YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMA 379

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             GI P   TYN+++       K+  A+  +E M   G+   +VTY++++  Y     MD
Sbjct: 380 DSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMD 438

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA KL+ EM  K   P V++YTT++KG++     D A  +  EMK   V  N  TY  L+
Sbjct: 439 EAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLI 498

Query: 274 PGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
            GLC  G++ EV ++L+    E ++P      +  ++    K+G + +A  V + M    
Sbjct: 499 NGLCVVGRVCEVGEMLKRFETEGFVPTA--MTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
           IP     Y   I+ +CK    D A+K+L+ +  K   LRP                    
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG--LRP-------------------- 594

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
                               D  A+N+LI G  +EGN   A +++ +M + G+  +   Y
Sbjct: 595 --------------------DIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
              I  Y       +A    + MI++G    ++ + ++++   +DG V  A ++   MV 
Sbjct: 635 NSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVA 694

Query: 513 KG-VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           KG + +++   A +   L   G +++A   +D M +    PN   ++ L++     GK  
Sbjct: 695 KGNIPDHITFTA-LTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQ 753

Query: 569 AAVKLLDFCLGRDCIIDLASYE 590
            A +L D  L R  + D  +Y+
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYD 775



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 223/513 (43%), Gaps = 50/513 (9%)

Query: 1   MAERAWTTRLQNKIRALVPQFDH-NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH 59
           M E+A+    Q +   L+P  +  N+V   L   K  + A+  F+ +  +G+   D  T+
Sbjct: 332 MPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI--PDAFTY 389

Query: 60  LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
             +I  L +  K+  A  +   M + GV+     +  L+  Y   G + E+VK++  M  
Sbjct: 390 NILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPG 449

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G   +V +Y  L K  + +  +  A     +M   G+    +TYN ++ G  +  ++  
Sbjct: 450 KGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCE 509

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
                +  ++ G     +TYN++ING+ +   M  A  ++ +M  K I P +++YT+ I 
Sbjct: 510 VGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID 569

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           GY      D AL++ ++++   ++P+   Y +L+ G C  G M    +VL  M++  + P
Sbjct: 570 GYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLP 629

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
                                          +S+      Y   I  +   +M + A++L
Sbjct: 630 N------------------------------ISV------YNSFITGYKNLKMMEEALRL 653

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFN 418
            +K++++ I        D++ ++Y  +I     +G    A   + +++ KG + D + F 
Sbjct: 654 YEKMIKEGI--------DLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFT 705

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            L  G  + G+ D A +++  M R  +  +   Y  LI  YLR G+  +A    D M+E 
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765

Query: 479 GHSPASSLFRSV--MESLFEDGRVQTASRVMKS 509
              P  + +  +  M+SL  D  +   +  + S
Sbjct: 766 KIMPDDTTYDILVGMKSLGSDSPIDAENPNLSS 798



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 124/564 (21%), Positives = 230/564 (40%), Gaps = 53/564 (9%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           +D + +   + G Y  A R F++M +  IEP +   +V +           A+     M+
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
             G      T+N++++   +  +M+EA  +  E+     + +V+  TT++ GY       
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            AL IF+E     + P  VTYT L+ G  + G   +  ++ R+M +  + P  N   M +
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
            G+         A  + K M    IP +A  Y ILI   C+      A+ L +K+ E  +
Sbjct: 360 KGLL-NDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
             +P         +Y+ ++   C NG   +A   + ++  KG   + V +  L++GH  +
Sbjct: 418 --KPYIV------TYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINK 469

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
              D A+ ++  M + GV  +   Y  LI      G   +    L     +G  P +  +
Sbjct: 470 AAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTY 529

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENL----------------DLVAKILE---- 527
            S++    + G + +A  V + M  KG+  N+                DL  K+L     
Sbjct: 530 NSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC 589

Query: 528 ---------------ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
                               G++  AL  + LM++ G +PN   ++S ++          
Sbjct: 590 KGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEE 649

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A++L +  +     +D A+Y  ++D     G    A  +  +++ KG + D  +   L  
Sbjct: 650 ALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTH 709

Query: 630 GLNQEGNTKQADILSRMIRGEMSR 653
           GL + G+   A    R +  EM+R
Sbjct: 710 GLCRNGDIDDA----RKLLDEMNR 729



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 95/461 (20%), Positives = 183/461 (39%), Gaps = 18/461 (3%)

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M+ +G  LD   ++ ++    +    D+A +LF EM    IEP     +  I     + 
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
            A+ AL +  +M+     P   T+ +++  L   G+M E   +  E++      K  SV 
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLAT---GKKMSVV 283

Query: 306 M--KLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           +   L+   C    +  A D+ +  +R   +PT+   Y +LI    +  M ++A +L  +
Sbjct: 284 LATTLMHGYCLQREVRKALDIFEETLRDGLVPTDV-TYTVLIRGCTEEGMPEKAYELCRQ 342

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIR 422
           + +  ++  P +      + +N +I+ L ++     A   F+++   G+ D   +N LI 
Sbjct: 343 MRDHGLL--PST------NEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIH 394

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
              +      A  + + M   GV      Y  L+  Y   G   +A      M   G +P
Sbjct: 395 WLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTP 454

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               + ++M+          A  ++  M + GV  N      ++  L + G V E    +
Sbjct: 455 NVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEML 514

Query: 543 DLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
                 G VP    ++S+++   + G   +A  +      +    ++ +Y   +D     
Sbjct: 515 KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT 574

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
                A  +L  +  KG   D  + + LI G  QEGN   A
Sbjct: 575 SCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHA 615


>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 521

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 226/463 (48%), Gaps = 18/463 (3%)

Query: 22  DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
            H    N++   K+ +HAL+ F  V     FNH+  T+  +I  L +  K +    +L  
Sbjct: 58  SHESAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQ 117

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER-SVKSYDALFKLILRRG 140
           M  +  ++ E++F  L++ + K  + +  +++F  ++ +  E+ S+K+      +++   
Sbjct: 118 MTYETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESK 177

Query: 141 RYMMAKR---YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDV 196
           +  +A++   Y N+ L   + P    +N+++     S  LE+A+    +M KSR    +V
Sbjct: 178 QIDLAQKCLLYVNEHLK--VRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNV 235

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKN-IEPTVISYTTMIKGYVAVERADDALRIFD 255
           +TY+T+I+G     ++ EA +LF EM  K+ I P  ++Y+ +IKG+    +AD A +I +
Sbjct: 236 ITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIME 295

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
            M+S    PN   Y+ L+ G C  G++ E ++V  EM    + P D   +  L+   C  
Sbjct: 296 FMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKP-DTVGYTTLINCFCGV 354

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G ++ A ++LK M  +    +A  + +L++  C+   +D A+++L+ L  + + L     
Sbjct: 355 GRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLN---- 410

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN-LIRGHSKEGNPDSAF 434
                 SY  ++  LC  G+  K+      ++ +G +   A +N L+    + G  D+A 
Sbjct: 411 ----KGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAV 466

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
             +  + + G   +  ++  LIE   R+ +       +D ++E
Sbjct: 467 TALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDELVE 509



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 175/395 (44%), Gaps = 17/395 (4%)

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           + +G + +  TY+T+I+   + KK    + L  +M  +  +     +  ++K +      
Sbjct: 84  EQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLH 143

Query: 248 DDALRIFDEMKSF-DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
           +  L +F  ++     KP+    +  L  L ++ ++   QK L  + E      +  +F 
Sbjct: 144 ERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFN 203

Query: 307 KLLGVQCKSGHLNAAADVLKAM--IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
            L+   CKSG L +A +V+  M   R S P     Y  LI+  C       AI+L +++V
Sbjct: 204 ILVKHHCKSGDLESALEVMHEMKKSRRSYPNVIT-YSTLIDGLCGNGRLKEAIELFEEMV 262

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNN--LIR 422
            K+ IL        +A +Y+ +I+  CH G+  +A     + M+    DP  FN   L+ 
Sbjct: 263 SKDQILP-------DALTYSVLIKGFCHGGKADRARKIM-EFMRSNGCDPNVFNYSVLMN 314

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  KEG  + A E+   M   G+  D   Y  LI  +   G   +A   L  M E     
Sbjct: 315 GFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKA 374

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
            +  F  +++ L  +GR   A R+++++  +GV  N      +L  L  +G +E++   +
Sbjct: 375 DAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALL 434

Query: 543 DLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLL 574
            LM+  G VP++   + LL  L E G    AV  L
Sbjct: 435 GLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTAL 469



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 106/241 (43%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I+     GK + AR I+  M   G   +   + VL+  + K+G ++E+ ++F
Sbjct: 270 DALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVF 329

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D MK  G++     Y  L       GR   A     +M     +    T+NV+L G    
Sbjct: 330 DEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCRE 389

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + + A+R  E++   G+ L+  +Y  ++N   +  +++++  L   M  +   P   + 
Sbjct: 390 GRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATS 449

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++         D+A+     +      P   ++  L+  +C   K++ V +++ E+VE
Sbjct: 450 NELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDELVE 509

Query: 295 R 295
           +
Sbjct: 510 K 510


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 10/365 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I    R G L  A  I+  M  KG++     +  +I    KKG    +  I   M
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
             +G+     +Y+ L     RR  +  AK  F +ML +G+ P   +++ ++  F  +  L
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A+ +F DMK  G+  D V Y  +++GY R   M EA K+  EM E+     VI+Y T+
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G    +   DA ++FDEM      P+  T+T L+ G C  G M +   +   M +R I
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P D   +  L+   CK G +  A+++   MI   I      YGILI  +C       A 
Sbjct: 243 KP-DIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
           +L D ++EK I    + TL     + N +I+  C +G + KA+ F  +++ KGV  D ++
Sbjct: 302 RLWDVMIEKGI----KPTL----VTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHIS 353

Query: 417 FNNLI 421
           +N LI
Sbjct: 354 YNTLI 358



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 174/372 (46%), Gaps = 16/372 (4%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           +VTYNT+I  Y R   ++EA ++   M +K ++P++ +Y  +I G     R   A  I  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS 315
           EM +  + P+  TY  LL   C      E +++  EM+ + + P D   F  L+ V  ++
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVP-DLVSFSSLMAVFSRN 119

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
            HL+ A    + M +  +  +   Y +L+  +C+      A+K+ D+++E+  +L     
Sbjct: 120 RHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL----- 174

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAF 434
              +  +YN ++  LC       A+  F +++++G L D   F  LI GH ++GN   A 
Sbjct: 175 ---DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 231

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +   M +R +  D  AY  LI+ + + GE   A    D MI     P    +  ++ + 
Sbjct: 232 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 291

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG---HVEEALGRIDLMMQSGSV 551
              G V  A R+   M+EKG+K  L     +++     G     +E LGR   M+  G  
Sbjct: 292 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR---MIAKGVA 348

Query: 552 PNFDSLLSVLSE 563
           P+  S  +++++
Sbjct: 349 PDHISYNTLIND 360



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 1/265 (0%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           N   A + F  + R G+   D  +   ++ +  R   L+ A     DM K G+  D  ++
Sbjct: 86  NFSEAKEIFGEMLRQGVV-PDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 144

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            VL+  Y + G + E++KI D M + G    V +Y+ +   + +      A + F++M+ 
Sbjct: 145 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 204

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G  P  +T+  ++ G      +  A+  F  M  R I  D+V YNT+I+G+ +  +M++
Sbjct: 205 RGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEK 264

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
           A +L+  M  + I P  I+Y  +I  Y +V    +A R++D M    +KP  VT   ++ 
Sbjct: 265 ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 324

Query: 275 GLCDAGKMVEVQKVLREMVERYIPP 299
           G C +G   +  + L  M+ + + P
Sbjct: 325 GYCRSGDSSKADEFLGRMIAKGVAP 349



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 158/361 (43%), Gaps = 41/361 (11%)

Query: 25  LVYNVLHGAKNSE----HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN L GA   E     A +    +   GL      T+  +I  L + G+   A+ IL+
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGL-KPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G+  D   +  L+    ++    E+ +IF  M + GV   + S+ +L  +  R  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A  YF  M   G+ P    Y V++ G+  +  +  A++  ++M  +G  LDV+ YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEK----------------------------------- 225
           T++NG  + K + +A+KLF EM E+                                   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
           NI+P +++Y T+I G+  V   + A  ++D M S  + PN +TY  L+   C  G + E 
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
            ++   M+E+ I P   +    + G  C+SG  + A + L  MI   +  +   Y  LI 
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKG-YCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359

Query: 346 N 346
           +
Sbjct: 360 D 360



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 159/349 (45%), Gaps = 13/349 (3%)

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  L+G  C+ G L  A +++ +M    +      Y  +I   CK   Y RA  +L ++
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
           +   I L P +T      +YN ++   C      +A+  F +++++GV+ D V+F++L+ 
Sbjct: 63  LN--IGLSPDTT------TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMA 114

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
             S+  + D A    + M + G+  D   Y  L+  Y R G   +A    D M+E G   
Sbjct: 115 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 174

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               + +++  L ++  +  A ++   MVE+G   +      ++      G++ +AL   
Sbjct: 175 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
             M Q    P+   +++L+    + G+   A +L D  + R    +  +Y  +++A  + 
Sbjct: 235 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 294

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
           G    A+ +   ++EKG      + + +I G  + G++ +AD  L RMI
Sbjct: 295 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 343



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 3/229 (1%)

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V +N LI  + +EG  + AFEI+  M  +G+      Y  +I    +KG  A AK  L  
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+  G SP ++ + +++           A  +   M+ +GV  +L   + ++       H
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           +++AL     M + G VP+   +  L+      G  + A+K+ D  L + C++D+ +Y  
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +L+ L       +A  +  +++E+G + D+ +   LI G  Q+GN  +A
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKA 230



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 3/183 (1%)

Query: 23  HNLVYNVLHGAKNSEHALQFF-RWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLD 81
           +N + N L   K    A + F   VER  L   D  T   +I    + G +  A  +   
Sbjct: 179 YNTILNGLCKEKMLTDADKLFDEMVERGAL--PDFYTFTTLIHGHCQDGNMTKALSLFGT 236

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M ++ ++ D   +  LI+ + K G ++++ +++D M    +  +  +Y  L       G 
Sbjct: 237 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 296

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A R ++ M+ +GI+PT  T N ++ G+  S     A  F   M ++G++ D ++YNT
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 356

Query: 202 MIN 204
           +IN
Sbjct: 357 LIN 359


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 225/513 (43%), Gaps = 14/513 (2%)

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL- 194
           +L  GR+   +R F  + S G  P    +N  +     +  L  A+     M   G    
Sbjct: 2   LLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           +  +YN +I G  R  +  +A ++F EM E+ + P  I+Y TMI G++     +   R+ 
Sbjct: 62  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           D+M    +KPNA+TY  LL GLC AG+M E   +L EM  + + P D   +  L     +
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP-DGFTYSILFDGLSR 180

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           +G   A   +    ++  +        IL+   CK      A ++L  LV   ++  P  
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV--PTR 238

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
            +      YN +I   C  G+   A   F Q+  + +  D + +N LI G  K     +A
Sbjct: 239 VI------YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 292

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
            +++  M   GV    + +  LI++Y R G+       L  M E+G  P    + S++ +
Sbjct: 293 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 352

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
             ++G++  A  ++  M  K V  N  +   I++A +  G  ++A   ++ M  +G  P+
Sbjct: 353 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 412

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              ++ L+  L  + +   A ++++       I D  SY  ++ A    G    A  +  
Sbjct: 413 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 472

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           ++ + G  +  ++  +LI+GL   G   + + L
Sbjct: 473 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 505



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 111/503 (22%), Positives = 218/503 (43%), Gaps = 29/503 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A+   R + R G    +  ++  +I  + R G+   A  +  +M ++ V  +   +  +I
Sbjct: 46  AVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMI 105

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + + K G ++   ++ D M   G++ +  +Y+ L   + R GR        ++M S+ + 
Sbjct: 106 DGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV 165

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TY+++  G   +   +  +  F      G+++   T + ++NG  +  K+  AE++
Sbjct: 166 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 225

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              +    + PT + Y T+I GY      + A   F +MKS  +KP+ +TY AL+ GLC 
Sbjct: 226 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 285

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           A ++   Q +L EM +  + P   + F  L+    ++G L     VL  M    +     
Sbjct: 286 AERITNAQDLLMEMQDNGVNPTVET-FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 344

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ------------------------- 373
            YG ++  FCK      A+ +LD +  K+++   Q                         
Sbjct: 345 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 404

Query: 374 --STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNP 430
             + +     +YN +I+ LC+  Q  +AE     L    ++ D V++N LI      GN 
Sbjct: 405 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 464

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D A ++ + M + G+      Y  LI      G   + +     M+++   P++++   +
Sbjct: 465 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 524

Query: 491 MESLFEDGRVQTASRVMKSMVEK 513
           +E+  + G    A  + K M++K
Sbjct: 525 VEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 118/507 (23%), Positives = 214/507 (42%), Gaps = 19/507 (3%)

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER- 124
           LGR   +  A  IL      G + D   +   +++    G + E+V +   M + G    
Sbjct: 5   LGRHADVRRAFGIL---ASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           +  SY+ +   + R GR   A   F++M    + P   TYN M+ G      LE   R  
Sbjct: 62  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           + M   G+  + +TYN +++G  R  +M E   L  EM  + + P   +Y+ +  G    
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 181

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
             +   L +F +     V     T + LL GLC  GK+   ++VL+ +V   + P    +
Sbjct: 182 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT-RVI 240

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           +  L+   C++G L  A      M    I  +   Y  LI   CKAE    A  LL ++ 
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIR 422
           +  +        +    ++N +I      GQ  K  I   ++ + G L P  V++ +++ 
Sbjct: 301 DNGV--------NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG-LKPNVVSYGSIVN 351

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
              K G    A  I+  M  + V  +A  Y  +I++Y+  G    A   ++ M  +G SP
Sbjct: 352 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 411

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
           +   +  +++ L    ++  A  ++ S+    +  +      ++ A   RG++++AL   
Sbjct: 412 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 471

Query: 543 DLMMQSG---SVPNFDSLLSVLSEKGK 566
             M + G   +V  +  L+S L   G+
Sbjct: 472 QRMHKYGIKSTVRTYHQLISGLGGAGR 498



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 137/294 (46%), Gaps = 2/294 (0%)

Query: 3   ERAWTTRLQNKIRALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A++T  Q K R + P    +N + N L  A+   +A      ++  G+ N   ET   
Sbjct: 255 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV-NPTVETFNT 313

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+  GR G+L     +L +M + G++ +   +  ++ ++ K G + E+V I D M    
Sbjct: 314 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 373

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  + + Y+A+    +  G    A     KM S GI P+  TYN+++ G     ++  A 
Sbjct: 374 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 433

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
                + +  +  D V+YNT+I+       +D+A  L   M +  I+ TV +Y  +I G 
Sbjct: 434 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 493

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
               R ++   ++ +M   +V P+   +  ++      G  ++ + + +EM+++
Sbjct: 494 GGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/501 (24%), Positives = 222/501 (44%), Gaps = 15/501 (2%)

Query: 39  ALQFFRWVERAGL--FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           A+  F  + RAG      D  T   +I      G LN     L  + K G++     F  
Sbjct: 125 AVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTP 184

Query: 97  LIESYGKKGIVQESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           L+ +   +    +++ I    M +LG    V SY  L K +    +   A    + M  +
Sbjct: 185 LLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAED 244

Query: 156 G--IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           G    P   +Y  ++ GFF    +  A   F  M   GI  +VVT N++I+G  + + MD
Sbjct: 245 GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 304

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +AE +  +M +++I P   +Y ++I GY++  +  +A+RI  EM     +PN VTY+ L+
Sbjct: 305 KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLI 364

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC +G   E +++   M++    P + S +  LL      G+L    +V   M++  +
Sbjct: 365 DCLCKSGLHAEAREIFNSMIQSGQKP-NASTYGSLLHGYATEGNLVDMNNVKDLMVQNGM 423

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 + I I  +CK    D A    +K+ ++  +         +  +Y  +I  LC  
Sbjct: 424 RPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFM--------PDIVAYTTVIDGLCKI 475

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+   A   F Q++  G+  D + FN LI G +  G  + A E+   M  RG+P + + +
Sbjct: 476 GRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTF 535

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +I+   ++G+  +A+   D M   G  P    + +++   F  G V    +++  M+ 
Sbjct: 536 NSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 595

Query: 513 KGVKENLDLVAKILEALLMRG 533
            G+K        +L+ ++  G
Sbjct: 596 IGLKPTAVTFNTLLDGMVSMG 616



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 128/550 (23%), Positives = 235/550 (42%), Gaps = 23/550 (4%)

Query: 110 SVKIFDIMKQLGVER---SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           +V +F+ M + G ++    + ++  L       G   +      +++  G+     T+  
Sbjct: 125 AVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTP 184

Query: 167 MLWGFFLSLKLETAIRF-FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
           +L       +   A+      M   G + DV +Y T++ G    KK +EA +L   M E 
Sbjct: 185 LLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAED 244

Query: 226 --NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
             N  P V+SYTT+I G+        A  +F +M    + PN VT  +++ GLC    M 
Sbjct: 245 GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 304

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           + + VL++M++ +I P + + +  L+     SG    A  +LK M R         Y +L
Sbjct: 305 KAEAVLQQMIDEHIMP-NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSML 363

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I+  CK+ ++  A ++ + ++        QS     AS+Y  ++      G         
Sbjct: 364 IDCLCKSGLHAEAREIFNSMI--------QSGQKPNASTYGSLLHGYATEGNLVDMN-NV 414

Query: 404 RQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           + LM +  + P    FN  I  + K G  D A      M ++G   D  AY  +I+   +
Sbjct: 415 KDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCK 474

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
            G   DA +    MI+DG SP    F +++      G+ + A  +   M+++G+  N++ 
Sbjct: 475 IGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNT 534

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL 578
              +++ L   G V EA    DLM ++G+ PN   +++++      G+    +KLLD  L
Sbjct: 535 FNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDML 594

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
                    ++  +LD +++ G  L    +  K +      D +  D L       G   
Sbjct: 595 LIGLKPTAVTFNTLLDGMVSMG--LKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKAD 652

Query: 639 QADILSRMIR 648
           + D ++  I+
Sbjct: 653 KTDTITENIK 662



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 23/277 (8%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G++    +F + I +Y K G + E+   F+ M+Q G    + +Y  +   + + GR
Sbjct: 418 MVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGR 477

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F +M+ +G+ P   T+N ++ GF L  K E A   F +M  RGI  +V T+N+
Sbjct: 478 LDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNS 537

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           MI+   +  K+ EA KLF  M     +P V+SY TMI GY       + +++ D+M    
Sbjct: 538 MIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG 597

Query: 262 VKPNAVTYTALLPGL-------------------CDAGKMVEVQKVLREMVERYIPPKDN 302
           +KP AVT+  LL G+                   C+ G++ ++  + REM+ +       
Sbjct: 598 LKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTI 657

Query: 303 SVFMKLLGVQCKSG-HLNAAADVLKAMIRLSIPTEAG 338
           +  +KL GV  K+  H ++    LKA   L + T+AG
Sbjct: 658 TENIKLRGVTVKASYHCSSVVISLKA---LEVVTQAG 691


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/483 (22%), Positives = 210/483 (43%), Gaps = 12/483 (2%)

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           ++ ++G+ G + E+  +   M+  G+   V++ + + ++ L  G ++ A++ F+ M   G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   ++  ++       K+E        M   G SLD  T   ++       +  +  
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           + F  M E    P V++YT  I G         A  + +EM    +KPN  T+T L+ GL
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  G      ++  ++++      +   +  ++G  C+ G L  A  +L  M+   +   
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI   CK   +DRA +L++K+ ++  +  P         +YN +I   C  G+ 
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL--PN------IYTYNAVIDGFCKKGKI 408

Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
            +A    R    +G+  D + +  LI  H K+G+   A ++   M   G   D +AY  L
Sbjct: 409 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 468

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I +Y ++ +  +++   D  +  G  P    + S++    + GR   A RV + MV+ G 
Sbjct: 469 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 528

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE---KGKTIAAVK 572
             +      ++  L     +EEA    + M+    VP   + +++  E   + KT  AV 
Sbjct: 529 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVS 588

Query: 573 LLD 575
           +LD
Sbjct: 589 VLD 591



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 198/441 (44%), Gaps = 14/441 (3%)

Query: 38  HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
           +A + F  + RAG+   +R +   ++ +  R GK+     +L  M + G   D     V+
Sbjct: 164 YARKVFDGMTRAGVCPDER-SFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVV 222

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           + S  +KG  ++  + F  M + G   +V +Y A    + +R     A     +M+  G+
Sbjct: 223 VRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGL 282

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           +P  +T+  ++ G       E A R F  + KS     +V TY  MI GY R  K+  AE
Sbjct: 283 KPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAE 342

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L   M E+ ++P   +YTT+I G+      D A  + ++MK     PN  TY A++ G 
Sbjct: 343 MLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGF 402

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  GK+ E  KVLR    + +   D   +  L+   CK GH+  A D+   M+      +
Sbjct: 403 CKKGKIQEAYKVLRMATSQGL-KFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPD 461

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  LI  +C+    + + K  DK +   ++   Q        +Y  MI   C  G++
Sbjct: 462 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQ--------TYTSMIAGYCKVGRS 513

Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK-IMGRRGVPRDADAYIC 454
             A   F ++++ G   D + +  LI G  KE   + A  + + ++ +R VP +    + 
Sbjct: 514 TLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEV-TRVT 572

Query: 455 LIESYLRKGEPADAKTALDSM 475
           L   Y R+ + + A + LD +
Sbjct: 573 LTFEYCRREKTSIAVSVLDRL 593



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 145/286 (50%), Gaps = 1/286 (0%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L P  + H  + + L     +E A + F  + ++  +  +  T+  MI    R GKL 
Sbjct: 280 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 339

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +L+ M ++G++ + + +  LI  + K G    + ++ + MKQ G   ++ +Y+A+ 
Sbjct: 340 RAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVI 399

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
               ++G+   A +      S+G++  + TY +++        +  A+  F+ M   G  
Sbjct: 400 DGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCC 459

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            D+  Y ++I+ Y + ++M+E++K F +     + PT  +YT+MI GY  V R+  ALR+
Sbjct: 460 PDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRV 519

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           F+ M       +++TY AL+ GLC   ++ E + +   M+++ + P
Sbjct: 520 FERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 565



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 7/267 (2%)

Query: 10  LQNKIR--ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEIL 66
           L NK++    +P  + +N V +        + A +  R     GL   D+ T+  +I   
Sbjct: 379 LMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGL-KFDKITYTILITEH 437

Query: 67  GRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
            + G + +A  +   M + G   D + +  LI +Y ++  ++ES K FD    +G+  + 
Sbjct: 438 CKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTK 497

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           ++Y ++     + GR  +A R F +M+  G      TY  ++ G     +LE A   +E 
Sbjct: 498 QTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEG 557

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M  + +    VT  T+   Y R +K   A  +   + ++    TV     +++   A+  
Sbjct: 558 MLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTV---DVVVRKLSALGD 614

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALL 273
            D A     ++   D   +  TYT  +
Sbjct: 615 VDAASLFLKKVLDEDYAVDHATYTGFI 641


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 132/533 (24%), Positives = 228/533 (42%), Gaps = 50/533 (9%)

Query: 56  RETHL-KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           RETHL K++    + GK N +   L  +  KG   D  +   LI+ +            F
Sbjct: 77  RETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGF------------F 124

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           +                 FK I +  R M       ++L    EP    YN ++ GF   
Sbjct: 125 N-----------------FKNIEKASRVM-------EILESHTEPDVFAYNAVISGFCKV 160

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            ++E A +    MK+RG   D+VTYN MI      +K+  A  +  ++   N  PTVI+Y
Sbjct: 161 NQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITY 220

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
           T +I+  +     ++A+++ +EM +  + P+  TY A++ G+C  G +    +++  +  
Sbjct: 221 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS 280

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           +   P D   +  LL      G  +    ++  M           Y ILI + C+    D
Sbjct: 281 KGCEP-DVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRID 339

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            AI +L  ++EKE        L  +  SY+P+I  LC  G+   A      ++  G L D
Sbjct: 340 EAISVLKVMIEKE--------LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 391

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V +N ++    K GN + A EI   +   G P +  +Y  +I +    G+ + A   + 
Sbjct: 392 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 451

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
           +MI  G  P    + S++  L  DG V+ A  ++  M + G +  +     +L  L    
Sbjct: 452 AMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 511

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
            +++A+G    M++ G  PN   +  L+  +   G    A++L +    RD I
Sbjct: 512 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 182/424 (42%), Gaps = 18/424 (4%)

Query: 43  FRWVERAGLFNHDRETHLK--------MIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           F+ +E+A       E+H +        +I    +V ++  A  +L  M  +G   D   +
Sbjct: 126 FKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTY 185

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            ++I S   +  +  ++ + D +       +V +Y  L +  +  G    A +   +ML+
Sbjct: 186 NIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLA 245

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G+ P  +TYN ++ G      +E A      + S+G   DV++YN ++  +    K DE
Sbjct: 246 RGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDE 305

Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
            EKL AEM  +  EP  ++Y+ +I       R D+A+ +   M   ++ P+  +Y  L+ 
Sbjct: 306 GEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLIS 365

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
            LC  G++     ++  M+     P D   +  +L   CK+G+ N A ++   +  +  P
Sbjct: 366 ALCKEGRLDLAIGIMDYMISNGCLP-DIVNYNTILAALCKNGNANQALEIFNKLRGMGCP 424

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                Y  +I          RA+ ++  ++ K I        D +  +YN +I  LC +G
Sbjct: 425 PNVSSYNTMISALWSCGDRSRALGMVPAMISKGI--------DPDEITYNSLISCLCRDG 476

Query: 395 QTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
              +A      + + G    V ++N ++ G  K    D A  +   M  +G   +   YI
Sbjct: 477 LVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYI 536

Query: 454 CLIE 457
            LIE
Sbjct: 537 LLIE 540



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/443 (22%), Positives = 194/443 (43%), Gaps = 49/443 (11%)

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           ++N   +  K +E+      +  K   P VI  T +IKG+   +  + A R+ + ++S  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-H 142

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
            +P+   Y A++ G C                                    K   + AA
Sbjct: 143 TEPDVFAYNAVISGFC------------------------------------KVNQIEAA 166

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
             VL  M       +   Y I+I + C       A+ +LD+L+    +            
Sbjct: 167 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCM--------PTVI 218

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
           +Y  +I+     G   +A     +++ +G+L D   +N +IRG  KEG  + A E++  +
Sbjct: 219 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL 278

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
             +G   D  +Y  L+ ++L +G+  + +  +  M   G  P    +  ++ SL   GR+
Sbjct: 279 TSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRI 338

Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSL 557
             A  V+K M+EK +  +      ++ AL   G ++ A+G +D M+ +G +P   N++++
Sbjct: 339 DEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI 398

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           L+ L + G    A+++ +   G  C  +++SY  ++ AL + G    A  ++  ++ KG 
Sbjct: 399 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGI 458

Query: 618 VTDWKSSDKLIAGLNQEGNTKQA 640
             D  + + LI+ L ++G  ++A
Sbjct: 459 DPDEITYNSLISCLCRDGLVEEA 481



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 163/366 (44%), Gaps = 9/366 (2%)

Query: 13  KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRET---HLKMIEILGRV 69
           K R  +P     + YN++ G+  +   L     V    L ++   T   +  +IE     
Sbjct: 174 KARGFLPDI---VTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVE 230

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G +N A  +L +M  +G+  D   +  +I    K+G+V+ + ++   +   G E  V SY
Sbjct: 231 GGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISY 290

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L +  L +G++   ++   +M S G EP + TY++++       +++ AI   + M  
Sbjct: 291 NILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIE 350

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           + ++ D  +Y+ +I+   +  ++D A  +   M      P +++Y T++        A+ 
Sbjct: 351 KELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQ 410

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           AL IF++++     PN  +Y  ++  L   G       ++  M+ + I P D   +  L+
Sbjct: 411 ALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDP-DEITYNSLI 469

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C+ G +  A  +L  M +         Y I++   CK    D AI +  +++EK   
Sbjct: 470 SCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGC- 528

Query: 370 LRPQST 375
            RP  T
Sbjct: 529 -RPNET 533



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 121/248 (48%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           ++ T+  +I  L R G+++ A  +L  M +K +  D   ++ LI +  K+G +  ++ I 
Sbjct: 321 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 380

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M   G    + +Y+ +   + + G    A   FNK+   G  P   +YN M+   +  
Sbjct: 381 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 440

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
                A+     M S+GI  D +TYN++I+   R   ++EA  L  +M++    PTVISY
Sbjct: 441 GDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISY 500

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G   V R DDA+ +F EM     +PN  TY  L+ G+  AG   E  ++   +  
Sbjct: 501 NIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 560

Query: 295 RYIPPKDN 302
           R +  +D+
Sbjct: 561 RDVISQDS 568



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 150/352 (42%), Gaps = 19/352 (5%)

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE---NFCKAEMYDRAIKLLD 361
            MKLL   CK+G  N +   L+ ++      +      LI+   NF   E   R +++L+
Sbjct: 81  LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE 140

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNL 420
              E ++             +YN +I   C   Q   A     ++  +G L D V +N +
Sbjct: 141 SHTEPDVF------------AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIM 188

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I           A  ++  +           Y  LIE+ + +G   +A   L+ M+  G 
Sbjct: 189 IGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGL 248

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    + +++  + ++G V+ A+ ++ S+  KG + ++     +L A L +G  +E   
Sbjct: 249 LPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEK 308

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            +  M   G  PN   +  L+S L   G+   A+ +L   + ++   D  SY+ ++ AL 
Sbjct: 309 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 368

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRG 649
             G+   A  I+  ++  G + D  + + ++A L + GN  QA  +   +RG
Sbjct: 369 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRG 420


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 199/428 (46%), Gaps = 10/428 (2%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +++ ++ ++ K +    +   M   G+  D   F +LI  + +   +  ++ +   M +L
Sbjct: 84  RVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKL 143

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G   S+ +  +L     +  R+  A    + M   G  P    YN ++ G   +  L  A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           +  F  M+ +GI  D VTYNT+I+G +   +  +A +L  +M ++ I+P VI +T +I  
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           +V      +A  ++ EM    V PN  TY +L+ G C  G + + + +   MV +   P 
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP- 322

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+   CKS  +     +   M    +  +A  Y  LI  +C+A   + A K+ 
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
           +++V+          +  +  +YN ++  LC+NG+  KA +    L K  + +D + +N 
Sbjct: 383 NRMVD--------CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +I+G  +      A+ + + + R+GV  DA AYI +I    RKG   +A      M EDG
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494

Query: 480 HSPASSLF 487
             P+  ++
Sbjct: 495 FMPSERIY 502



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/431 (23%), Positives = 193/431 (44%), Gaps = 12/431 (2%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+  +  +  +I +  ++ +    ++KM + GI    +++ +++  F    +L  A+   
Sbjct: 78  SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
             M   G    +VT  +++NG+ +  +  EA  L   M      P V+ Y T+I G    
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
              ++AL +F  M+   ++ +AVTY  L+ GL ++G+  +  ++LR+MV+R I P  N +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP--NVI 255

Query: 305 FMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
           F   L+    K G+L  A ++ K MIR S+      Y  LI  FC       A  + D +
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIR 422
           V K     P      +  +YN +I   C + +       F ++  +G++ D   +N LI 
Sbjct: 316 VSKGCF--P------DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G+ + G  + A ++   M   GV  D   Y  L++     G+   A   ++ + +     
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               +  +++ L    +++ A  + +S+  KGVK +      ++  L  +G   EA    
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487

Query: 543 DLMMQSGSVPN 553
             M + G +P+
Sbjct: 488 RRMKEDGFMPS 498



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 158/303 (52%), Gaps = 3/303 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N V N L   ++  +AL+ F  +E+ G+   D  T+  +I  L   G+   A  +L DM
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGI-RADAVTYNTLISGLSNSGRWTDAARLLRDM 245

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            K+ +  +   F  LI+++ K+G + E+  ++  M +  V  +V +Y++L       G  
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             AK  F+ M+S+G  P   TYN ++ GF  S ++E  ++ F +M  +G+  D  TYNT+
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+GY +  K++ A+K+F  M +  + P +++Y  ++       + + AL + ++++  ++
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
             + +TY  ++ GLC   K+ E   + R +  + + P D   ++ ++   C+ G L   A
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP-DAIAYITMISGLCRKG-LQREA 483

Query: 323 DVL 325
           D L
Sbjct: 484 DKL 486



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/443 (21%), Positives = 191/443 (43%), Gaps = 15/443 (3%)

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           K D+A  LF EM +    P+++ +T ++     + + D  + ++ +M++  +  +  ++T
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            L+   C   ++     +L +M++    P   ++   LL   C+      A  ++ +M  
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTL-GSLLNGFCQGNRFQEAVSLVDSMDG 177

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
                    Y  +I   CK    + A+++   + +K I          +A +YN +I  L
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI--------RADAVTYNTLISGL 229

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
            ++G+   A    R ++K+ + DP  + F  LI    KEGN   A  + K M RR V  +
Sbjct: 230 SNSGRWTDAARLLRDMVKRKI-DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  LI  +   G   DAK   D M+  G  P    + +++    +  RV+   ++  
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
            M  +G+  +      ++      G +  A    + M+  G  P+   ++ LL  L   G
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           K   A+ +++     +  +D+ +Y  ++  L    K   A+ +   +  KG   D  +  
Sbjct: 409 KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 468

Query: 626 KLIAGLNQEGNTKQADILSRMIR 648
            +I+GL ++G  ++AD L R ++
Sbjct: 469 TMISGLCRKGLQREADKLCRRMK 491



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/444 (22%), Positives = 190/444 (42%), Gaps = 34/444 (7%)

Query: 162 HTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFA 220
           H Y   L      +K + A   F +M +SR I   +V +  ++    +  K D    L+ 
Sbjct: 45  HHYRERLRNELHCIKFDDAFSLFCEMLQSRPIP-SIVDFTRVLTVIAKMNKFDIVIYLYH 103

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
           +M+   I   + S+T +I  +    R   AL +  +M     +P+ VT  +LL G C   
Sbjct: 104 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 163

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           +  E   ++  M      P +  ++  ++   CK+  LN A +V   M +  I  +A  Y
Sbjct: 164 RFQEAVSLVDSMDGFGFVP-NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTY 222

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEI---ILRPQSTLD--------MEAS-------- 381
             LI     +  +  A +LL  +V+++I   ++   + +D        +EA         
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282

Query: 382 --------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDS 432
                   +YN +I   C +G  G A+  F  ++ KG   D V +N LI G  K    + 
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
             ++   M  +G+  DA  Y  LI  Y + G+   A+   + M++ G SP    +  +++
Sbjct: 343 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP 552
            L  +G+++ A  +++ + +  +  ++     I++ L     ++EA      + + G  P
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462

Query: 553 N---FDSLLSVLSEKGKTIAAVKL 573
           +   + +++S L  KG    A KL
Sbjct: 463 DAIAYITMISGLCRKGLQREADKL 486


>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
 gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
 gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/578 (24%), Positives = 250/578 (43%), Gaps = 59/578 (10%)

Query: 8   TRLQNKIRALVPQFDHNLVYNVLHGAKNSEH---ALQFFRWVERAGLFNHDRETHLKMIE 64
           + L    R  + +   N V  VL   +  E    A  FF W  +   + H+ E ++ +++
Sbjct: 101 SNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVD 160

Query: 65  ILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           +L     ++  R +  ++ K            LI+S+GK G+V+E + ++  MK+ G+  
Sbjct: 161 VLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGI-- 218

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
                                            EPT +TYN ++ G   ++ +++A R F
Sbjct: 219 ---------------------------------EPTLYTYNFLMNGLVSAMFVDSAERVF 245

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           E M+S  I  D+VTYNTMI GY +  +  +A +   +M+ +  E   I+Y TMI+   A 
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305

Query: 245 ERADDALRIFDEM--KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                 + ++ EM  K   V P+A  ++ ++ GLC  GK+ E   V   M+ +   P + 
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHA--FSLVIGGLCKEGKLNEGYTVFENMIRKGSKP-NV 362

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           +++  L+    KSG +  A  +L  MI      +   Y +++   CK    + A+     
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLI 421
                        L + +  Y+ +I  L   G+  +AE  F ++ +KG   D   +N LI
Sbjct: 423 C--------RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALI 474

Query: 422 RGHSKEGNPDSAFEIVKIM-GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
              +K    D A  + K M    G  +    Y  L+    ++    +A    D MI+ G 
Sbjct: 475 DAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGI 534

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK-ILEALLMRGHVEEAL 539
           +P ++ FR++   L   G+V  A +++  +   GV   LD   + ++  L   G ++EA 
Sbjct: 535 TPTAACFRALSTGLCLSGKVARACKILDELAPMGVI--LDAACEDMINTLCKAGRIKEAC 592

Query: 540 GRIDLMMQSG-SVPN--FDSLLSVLSEKGKTIAAVKLL 574
              D + + G  VP      +++ L + GK   A+KL+
Sbjct: 593 KLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 630



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 133/316 (42%), Gaps = 14/316 (4%)

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           +   P        LI++F K  M +  + +  K+ E  I    + TL     +YN ++  
Sbjct: 180 KFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGI----EPTL----YTYNFLMNG 231

Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
           L        AE  F ++M+ G + P  V +N +I+G+ K G    A E ++ M  RG   
Sbjct: 232 LVSAMFVDSAERVF-EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEA 290

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y+ +I++     +          M E G       F  V+  L ++G++     V 
Sbjct: 291 DKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVF 350

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
           ++M+ KG K N+ +   +++     G VE+A+  +  M+  G  P+   +  +++ L + 
Sbjct: 351 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 410

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G+   A+     C      I+   Y  ++D L  AG+   A  +  ++ EKG   D    
Sbjct: 411 GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 470

Query: 625 DKLIAGLNQEGNTKQA 640
           + LI    +     +A
Sbjct: 471 NALIDAFTKHRKVDEA 486


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 129/560 (23%), Positives = 252/560 (45%), Gaps = 26/560 (4%)

Query: 1   MAERAWTTRLQN----KIRALVPQFDHNLVYNVLHGAKNSEH-ALQFFRWVERAGLFNHD 55
           + E+ W    QN    K  +++   D  L+  VL+  +     AL+FF+ V     F   
Sbjct: 81  IQEKPWAFCNQNWVSDKFNSVIT--DPQLLIRVLYSIREKPTIALRFFKCVLTQPGFKTS 138

Query: 56  RETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD-EDMFEVLIESYGKKGIVQESVKIF 114
                 +++IL     +  A  ++    ++ + ++   + +VLI  Y    +  + + +F
Sbjct: 139 EYAFCAILQILVDNCLMKSAYWVM----ERIISFEMYGIVDVLIGGY----LNYQCLLVF 190

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M +      VK+ + + K++  +   + A   +  M   GI PT  TYN ML  F   
Sbjct: 191 EKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKG 250

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +++ A+     M+ RG     VT+N +ING ++  ++ +A+ L  EM +  +  +  +Y
Sbjct: 251 GEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTY 310

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I GY       +AL +++EM +  V P   ++  ++ G C  GKM + ++ L +M++
Sbjct: 311 NPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLK 370

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + + P D   +  L+   C+ G++  A  +L  +   ++      Y  LI+  C+    +
Sbjct: 371 KNLMP-DIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLE 429

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            A+KL + ++ + I   P      +  +Y  ++   C  G    A+ FF +++  G+  D
Sbjct: 430 TALKLKEDMINRGI--HP------DVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPD 481

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
             A+   I G  K G+   AF++ + M  +G P D   Y   +    + G   +A   L 
Sbjct: 482 QFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQ 541

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            MI DGH P    + S M +  E+G ++    +   M+ +G    +     ++ A  + G
Sbjct: 542 KMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNG 601

Query: 534 HVEEALGRIDLMMQSGSVPN 553
            ++ A+     M + G VPN
Sbjct: 602 RLDWAMAYFLEMQEKGVVPN 621



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 218/481 (45%), Gaps = 11/481 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+ +R +   G+      T+  M+    + G++  A  ++  M ++G    E  F VLI
Sbjct: 221 ALEVYRMMGEYGI-RPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
               KKG +Q++  +   M + G+  S  +Y+ L     ++G  + A   + +M++ G+ 
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           PT  ++N +++GF    K+  A +   DM  + +  D+++YNT+I G+ R   + EA  L
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             E++ +N+   +++Y T+I G   +   + AL++ ++M +  + P+ VTYT L+ G C 
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACK 459

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G M+  ++   EM+   + P   +   +++G + K G    A  + + M+    P +  
Sbjct: 460 LGNMLMAKEFFDEMLHVGLAPDQFAYTARIVG-ELKLGDTAKAFKLQEEMLTKGFPPDVI 518

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y + +   CK    + A +LL K++    +  P         +Y   +     NG   +
Sbjct: 519 TYNVFVNGLCKLGNLEEAGELLQKMIRDGHV--PDHV------TYTSFMHAHMENGHLRE 570

Query: 399 A-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
             EIF+  L +      V +  LI  H+  G  D A      M  +GV  +   Y  LI 
Sbjct: 571 GREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLIN 630

Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
            + +  +   A      M E G  P    +  ++      G+ Q A R+   M+ K ++ 
Sbjct: 631 GFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRP 690

Query: 518 N 518
           +
Sbjct: 691 D 691



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 109/206 (52%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  KG   D   + V +    K G ++E+ ++   M + G      +Y +     +  G
Sbjct: 507 EMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENG 566

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                +  F  MLS G  PT  TY V++    L+ +L+ A+ +F +M+ +G+  +V+TYN
Sbjct: 567 HLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYN 626

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +ING+ + +KMD+A K F EM+EK I P   +YT +I     + +  +ALR++ +M   
Sbjct: 627 VLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGK 686

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQ 286
            ++P++ T+ ALL  L    K+  VQ
Sbjct: 687 RIRPDSCTHGALLKKLDKDYKVQAVQ 712



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 91/188 (48%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D  T+   +  L ++G L  A  +L  M + G   D   +   + ++ + G ++E  
Sbjct: 513 FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGR 572

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           +IF  M   G   +V +Y  L       GR   A  YF +M  +G+ P   TYNV++ GF
Sbjct: 573 EIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGF 632

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               K++ A +FF +M+ +GI  +  TY  +IN      K  EA +L+A+M  K I P  
Sbjct: 633 CKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDS 692

Query: 232 ISYTTMIK 239
            ++  ++K
Sbjct: 693 CTHGALLK 700



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/227 (21%), Positives = 106/227 (46%), Gaps = 8/227 (3%)

Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
           A E+ ++MG  G+      Y  ++ S+ + GE   A   +  M E G  P+   F  ++ 
Sbjct: 221 ALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN 280

Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--- 549
            L + G +Q A  +++ M + G++ +      ++     +G + EAL   + M+  G   
Sbjct: 281 GLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSP 340

Query: 550 SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
           +V + ++++    ++GK   A + L   L ++ + D+ SY  ++      G    A+ +L
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILL 400

Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-----DILSRMIRGEM 651
            ++  +    +  + + LI GL + G+ + A     D+++R I  ++
Sbjct: 401 DELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDV 447


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 200/444 (45%), Gaps = 47/444 (10%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
             AL F   V   G F  D+  +  +I  L +VG+   A  +L  +    VQ +  M+  
Sbjct: 144 HQALLFHDNVVAMG-FQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYST 202

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
           +I+   K   V ++  ++  M   G+  +V +Y AL       G+   A   FNKM+ E 
Sbjct: 203 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILEN 262

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I+P  +T+N+++ GF    K++     F  M  +GI  +VVTY ++++GY   K++++A+
Sbjct: 263 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAK 322

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            +   M ++ + P + SY  +I G+  +++ D+A+ +F EM    + P+ VTY +L+ GL
Sbjct: 323 SILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGL 382

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C  GK+    K++ EM +R +PP                       D++           
Sbjct: 383 CKLGKISYALKLVDEMHDRGVPP-----------------------DIIT---------- 409

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
              Y  +++  CK    D+AI LL KL ++ I  RP         +Y  +I  LC  G+ 
Sbjct: 410 ---YSSILDALCKNHQVDKAIALLTKLKDQGI--RPN------MYTYTILIDGLCKGGRL 458

Query: 397 GKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A   F  L+ KG    V  +  +I G   +G  D A  ++  M       DA  Y  +
Sbjct: 459 EDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEII 518

Query: 456 IESYLRKGEPADAKTALDSMIEDG 479
           I S   K E  D    L  MI  G
Sbjct: 519 IRSLFDKDE-NDKAEKLREMITRG 541



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 189/400 (47%), Gaps = 12/400 (3%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G  P   T+  ++ G  L  ++  A+ F +++ + G  LD V Y T+I+G  +  +   A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
             L   +    ++P V+ Y+T+I G    +  +DA  ++ EM S  + PN VTY+AL+ G
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
               G++ +   +  +M+   I P D   F  L+   CK G +     V   M++  I  
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKP-DVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 300

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               Y  L++ +C  +  ++A  +L  + ++ +        + +  SYN +I   C   +
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGV--------NPDIQSYNILIDGFCKIKK 352

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
             +A   F+++  K ++ D V +N+LI G  K G    A ++V  M  RGVP D   Y  
Sbjct: 353 VDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 412

Query: 455 LIESYLRKGEPADAKTALDSMIED-GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           ++++ L K    D   AL + ++D G  P    +  +++ L + GR++ A  + + ++ K
Sbjct: 413 ILDA-LCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVK 471

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           G    ++    ++     +G  +EAL  +  M  +  +P+
Sbjct: 472 GYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPD 511



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/507 (20%), Positives = 205/507 (40%), Gaps = 78/507 (15%)

Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGIS-----LDVVTYNTMINGYNRFKKMDEAEK 217
           +Y V+   +F+  K   + +F ++     I      ++ + Y+++   ++    + +A  
Sbjct: 4   SYYVVPVSYFVPKKFH-SFQFLKNTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFS 62

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP------------- 264
           LF+ +  +N  P  I +  ++   V  +     L +  +M+   + P             
Sbjct: 63  LFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMG 122

Query: 265 ---NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
              N +T+T L+ GLC           L+  + + +   DN V M   G Q         
Sbjct: 123 YHPNTITFTTLIKGLC-----------LKGQIHQALLFHDNVVAM---GFQLD------- 161

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK----LVEKEIILRPQSTLD 377
                         + G YG LI   CK      A+ LL +    LV+  +++       
Sbjct: 162 --------------QVG-YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVM------- 199

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
                Y+ +I  +C +     A   + +++ KG+  + V ++ LI G    G    A ++
Sbjct: 200 -----YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 254

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
              M    +  D   +  L++ + + G+  + KT    M++ G  P    + S+M+    
Sbjct: 255 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 314

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
              V  A  ++ +M ++GV  ++     +++       V+EA+     M     +P+   
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 374

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           ++SL+  L + GK   A+KL+D    R    D+ +Y  +LDAL    +   A ++L K+ 
Sbjct: 375 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 434

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           ++G   +  +   LI GL + G  + A
Sbjct: 435 DQGIRPNMYTYTILIDGLCKGGRLEDA 461


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 138/571 (24%), Positives = 262/571 (45%), Gaps = 63/571 (11%)

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYD 130
           ++ AR +  DM K GV  +   F VL+  Y  +G +++++ + + M  +  V     +Y+
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            + K + ++GR    K     M   G+ P R TYN +++G+     L+ A +  E MK  
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
            +  D+ TYN +ING      M E  +L   MK   ++P V++Y T+I G   +  + +A
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
            ++ ++M++  VK N VT+   L  LC   K   V + ++E+V+ +    D   +  L+ 
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424

Query: 311 VQCKSGHLNAAADVLKAM----IRLSIPT---------------------EAGH------ 339
              K G L+ A ++++ M    I+++  T                      + H      
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484

Query: 340 ----YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
               YG LI  F + E  ++A+++ D++  K++ + P        S++N +I  LCH+G+
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEM--KKVKITPT------VSTFNSLIGGLCHHGK 536

Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
           T  A   F +L + G+L D   FN++I G+ KEG  + AFE      +       D Y C
Sbjct: 537 TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF--KPDNYTC 594

Query: 455 --LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L+    ++G    A    +++IE+      + + +++ +  +D +++ A  ++  M E
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEEREVDTVT-YNTMISAFCKDKKLKEAYDLLSEMEE 653

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ--SGSVPNFDSLLSVLSEKGKTIAA 570
           KG++ +       +  L+  G + E     D +++  SG   +    L V +EK    + 
Sbjct: 654 KGLEPDRFTYNSFISLLMEDGKLSET----DELLKKFSGKFGSMKRDLQVETEKNPATSE 709

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
            K        +   +  +Y  V+D L + G+
Sbjct: 710 SK-------EELNTEAIAYSDVIDELCSRGR 733



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 134/572 (23%), Positives = 248/572 (43%), Gaps = 46/572 (8%)

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG---FFLSLKLETAIRFFE 185
           +D      L  G+  +A + F KM+   ++P   T N +L G   +  S  + +A   F+
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEA----EKLFAEMKEKNIEPTVISYTTMIKGY 241
           DM   G+SL+V T+N ++NGY    K+++A    E++ +E K   + P  ++Y T++K  
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK---VNPDNVTYNTILKAM 250

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R  D   +  +MK   + PN VTY  L+ G C  G + E  +++  M +  + P D
Sbjct: 251 SKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP-D 309

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
              +  L+   C +G +    +++ AM  L +  +   Y  LI+   +  +   A KL++
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369

Query: 362 KL----------------------VEKEIILRP-QSTLDMEASS-----YNPMIQHLCHN 393
           ++                       ++E + R  +  +DM   S     Y+ +I+     
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G    A    R++ +KG+ ++ +  N ++    KE   D A  ++    +RG   D   Y
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             LI  + R+ +   A    D M +   +P  S F S++  L   G+ + A      + E
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G+  +      I+      G VE+A    +  ++    P+    + LL+ L ++G T  
Sbjct: 550 SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
           A+   +  L  +  +D  +Y  ++ A     K   AY +L ++ EKG   D  + +  I+
Sbjct: 610 ALNFFN-TLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668

Query: 630 GLNQEGNTKQADILSRMIRGEMSRGSQKEKKQ 661
            L ++G   + D L +   G+   GS K   Q
Sbjct: 669 LLMEDGKLSETDELLKKFSGKF--GSMKRDLQ 698



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 193/459 (42%), Gaps = 84/459 (18%)

Query: 53  NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
           N D  T+  +++ + + G+L+  + +LLDM K G+  +   +  L+  Y K G ++E+ +
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296

Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
           I ++MKQ  V   + +Y+ L   +   G         + M S  ++P   TYN ++ G F
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356

Query: 173 -LSLKLETAIRFFEDMKSRGI------------------------------------SLD 195
            L L LE A +  E M++ G+                                    S D
Sbjct: 357 ELGLSLE-ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415

Query: 196 VVTYNTMINGYNRF-----------------------------------KKMDEAEKLFA 220
           +VTY+T+I  Y +                                    +K+DEA  L  
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475

Query: 221 EMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAG 280
              ++      ++Y T+I G+   E+ + AL ++DEMK   + P   T+ +L+ GLC  G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535

Query: 281 KMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
           K     +   E+ E  + P D+S F  ++   CK G +  A +     I+ S   +    
Sbjct: 536 KTELAMEKFDELAESGLLP-DDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594

Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
            IL+   CK  M ++A+   + L+E+          +++  +YN MI   C + +  +A 
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEER---------EVDTVTYNTMISAFCKDKKLKEAY 645

Query: 401 IFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
               ++ +KG+  D   +N+ I    ++G      E++K
Sbjct: 646 DLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 121/235 (51%), Gaps = 1/235 (0%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +++ L +  KL+ A  +L    K+G   DE  +  LI  + ++  V+++++++D MK++ 
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V ++++L   +   G+  +A   F+++   G+ P   T+N ++ G+    ++E A 
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
            F+ +        D  T N ++NG  +    ++A   F  + E+  E   ++Y TMI  +
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAF 635

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
              ++  +A  +  EM+   ++P+  TY + +  L + GK+ E  ++L++   ++
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKF 690



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 177/418 (42%), Gaps = 47/418 (11%)

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P+   +   +  Y+   +   AL+IF +M    +KPN +T   LL GL            
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV----------- 177

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
                 RY  P   S+              ++A +V   M+++ +      + +L+  +C
Sbjct: 178 ------RY--PSSFSI--------------SSAREVFDDMVKIGVSLNVQTFNVLVNGYC 215

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
                + A+ +L+++V  E  + P +       +YN +++ +   G+    +     + K
Sbjct: 216 LEGKLEDALGMLERMV-SEFKVNPDNV------TYNTILKAMSKKGRLSDLKELLLDMKK 268

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G++ + V +NNL+ G+ K G+   AF+IV++M +  V  D   Y  LI      G   +
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
               +D+M      P    + ++++  FE G    A ++M+ M   GVK N  +   I  
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN-QVTHNISL 387

Query: 528 ALLMRGHVEEALGR-----IDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
             L +    EA+ R     +D+   S  +  + +L+    + G    A++++     +  
Sbjct: 388 KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447

Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            ++  +   +LDAL    K   A+++L    ++G + D  +   LI G  +E   ++A
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/344 (20%), Positives = 152/344 (44%), Gaps = 22/344 (6%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F+ D  T+  +I+   +VG L+ A  ++ +M +KG++ +      ++++  K+  + E+ 
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            + +   + G      +Y  L     R  +   A   +++M    I PT  T+N ++ G 
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
               K E A+  F+++   G+  D  T+N++I GY +  ++++A + + E  + + +P  
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +   ++ G       + AL  F+ +   + + + VTY  ++   C   K+ E   +L E
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSE 650

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M E+ + P D   +   + +  + G L+   ++LK          +G +G +  +     
Sbjct: 651 MEEKGLEP-DRFTYNSFISLLMEDGKLSETDELLKKF--------SGKFGSMKRDLQVET 701

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
             + A                +  L+ EA +Y+ +I  LC  G+
Sbjct: 702 EKNPATS------------ESKEELNTEAIAYSDVIDELCSRGR 733


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 217/449 (48%), Gaps = 20/449 (4%)

Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
           K++  M   G   +V +++ +   + + GR + A     + L  GI P   T+N+++ G 
Sbjct: 149 KMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGA 208

Query: 172 F------LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
                  L+LKL   +R  E M    +  D VTYN+ +NG+ +   +  AE+   EM  K
Sbjct: 209 IKMGAMDLALKL---VRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGK 265

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            IEP V +Y T++ GY  V   ++A R+ DE+    + PN+V Y +++  L   G M   
Sbjct: 266 EIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGA 325

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
             +L +M+++ I P   +  + + G+ C++G+LN A   L+ ++ +S+  +A  + ++I 
Sbjct: 326 SLLLSDMIDKRIYPDQFTYSIVIEGL-CRNGYLNEAFKFLQMILEMSLVRDAFSHNVVIN 384

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             C++     A +LL  +  + ++  P      +  ++  +I   C +G+   A   + +
Sbjct: 385 YLCRSNNLAGAKQLLANMYVRGLV--P------DVVTFGTLIDRHCKDGKVENAIQVYEK 436

Query: 406 LMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           ++K G   + + +N++I G +KEG+ D A  ++  + R G+  D   Y  LI  Y   G+
Sbjct: 437 MIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGK 495

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
              A      M   G   +   + +++ SL + G V  A  +MK MV +G+  +      
Sbjct: 496 IDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTI 555

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           ++ +   +   EE +   D M+  G VP+
Sbjct: 556 LITSFSKKCSPEEVIELHDYMVLKGVVPD 584



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 212/463 (45%), Gaps = 21/463 (4%)

Query: 43  FRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYG 102
           + ++E    FN        +I  LG+ G+L  A  ++    K G+  +   F ++I+   
Sbjct: 157 YGYIENVNTFN-------LIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAI 209

Query: 103 KKGIVQESVKI---FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
           K G +  ++K+    ++M    V+    +Y++      + G   +A+ +  +ML + IEP
Sbjct: 210 KMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEP 269

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
              TY  ++ G+     LE A R  +++  +G+  + V YN++I+  +    M+ A  L 
Sbjct: 270 NVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLL 329

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
           ++M +K I P   +Y+ +I+G       ++A +    +    +  +A ++  ++  LC +
Sbjct: 330 SDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRS 389

Query: 280 GKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH 339
             +   +++L  M  R + P D   F  L+   CK G +  A  V + MI+         
Sbjct: 390 NNLAGAKQLLANMYVRGLVP-DVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLI 448

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y  +I  F K   +D AI L+D        LR     D+   +YN +I   C+ G+  +A
Sbjct: 449 YNSVINGFAKEGSFDPAILLIDT-------LRRMGLFDV--VTYNTLIHGYCNCGKIDQA 499

Query: 400 EIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
              F ++   G+L   V +N LI    K G+   A E++K+M  RG+  D   Y  LI S
Sbjct: 500 FALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITS 559

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
           + +K  P +     D M+  G  P    +++++  L ++  V+
Sbjct: 560 FSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVE 602



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 3/239 (1%)

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D V +N+ + G  K GN   A E  K M  + +  +   Y  L++ Y R G   +A    
Sbjct: 235 DSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLC 294

Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
           D ++E G  P S ++ S++  L  +G ++ AS ++  M++K +  +    + ++E L   
Sbjct: 295 DELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRN 354

Query: 533 GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
           G++ EA   + ++++   V +    + +++ L        A +LL     R  + D+ ++
Sbjct: 355 GYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTF 414

Query: 590 EKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
             ++D     GK  NA  +  K+++ G   +    + +I G  +EG+   A +L   +R
Sbjct: 415 GTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLR 473



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/313 (19%), Positives = 135/313 (43%), Gaps = 32/313 (10%)

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
           ++I     ++ YD A+ ++  L+    I  P   LD   SSY+     +C +        
Sbjct: 46  VVIHVLVNSKRYDDALFIMGNLMNVNGI-SPLEVLDALISSYD-----ICKS-------- 91

Query: 402 FFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
                       P  F+ L+R  ++ G  + A+E++  +   G      A+   +   L+
Sbjct: 92  -----------SPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLK 140

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
             +          M+  G+    + F  ++ +L ++GR+  A  V+   ++ G+  N+  
Sbjct: 141 LNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVT 200

Query: 522 VAKILEALLMRGHVEEALG---RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
              I++  +  G ++ AL    ++++M      P+   ++S ++   + G    A +   
Sbjct: 201 FNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKK 260

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
             LG++   ++ +Y  ++D     G   NA+ +  +++EKG + +    + +I  L+ EG
Sbjct: 261 EMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEG 320

Query: 636 NTKQAD-ILSRMI 647
           + + A  +LS MI
Sbjct: 321 DMEGASLLLSDMI 333


>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 528

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 187/408 (45%), Gaps = 12/408 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL FF W      F H  E + +MI++ G+V   +    ++  M  + V+   + F +LI
Sbjct: 125 ALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILI 184

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             Y + G+  E+V  F+ M+    +    ++  L  ++ R+ R   A+ +F+  L +  E
Sbjct: 185 RRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDS-LKDKFE 243

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P    Y  ++ G+  +  +  A R F +MK  G   +V TY  +I+   R  ++  A  +
Sbjct: 244 PDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDV 303

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           FAEM +   EP  I++  +++ +V   R +  L+++++MK     P+ VTY  L+   C 
Sbjct: 304 FAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCK 363

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G + E  KVL  MV++   P + S F  L G   K   +N A  +   M  L       
Sbjct: 364 DGNLDEALKVLNSMVKKGCSP-NASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTV 422

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y IL+  F   +  D  +KL  ++ E ++        +   ++Y  +I   C  G    
Sbjct: 423 TYNILMRMFVDTKSTDMVLKLKKEMDEDDV--------EPNVNTYCVLIAMYCGMGHWNN 474

Query: 399 AEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           A  FFR+++++  L P    +  +++   K G      E+V +M  RG
Sbjct: 475 AYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRG 522



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 105/447 (23%), Positives = 188/447 (42%), Gaps = 53/447 (11%)

Query: 180 AIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           A+ FF    SR G +     YN MI+   + +  D   ++   MK +N+E ++ +++ +I
Sbjct: 125 ALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILI 184

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           + YV    A +A+  F+ M+ ++ KP+ + ++ L+  LC   +  E Q     + +++ P
Sbjct: 185 RRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEP 244

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
             D  V+  L+   C++G++  A  V   M           Y I+I+  C+         
Sbjct: 245 --DVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRC-------- 294

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
                                              GQ  +A   F +++  G   + + F
Sbjct: 295 -----------------------------------GQITRAHDVFAEMLDVGCEPNSITF 319

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           NNL+R H K G  +   ++   M R G P D   Y  LIES+ + G   +A   L+SM++
Sbjct: 320 NNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVK 379

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G SP +S F  +  S+ +   V  A R+   M E   K N  +   IL  + +     +
Sbjct: 380 KGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKAN-TVTYNILMRMFVDTKSTD 438

Query: 538 ALGRIDLMMQSGSV-PNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCI-IDLASYEKV 592
            + ++   M    V PN ++   L+++    G    A K     +   C+   L  YEKV
Sbjct: 439 MVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKV 498

Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVT 619
           L  L  AG+      ++  ++++G  T
Sbjct: 499 LQQLRKAGQLKKHEELVAVMVDRGFAT 525


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 128/571 (22%), Positives = 264/571 (46%), Gaps = 23/571 (4%)

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            ++  + K+G+V+E+ ++ + M+  G+  +V +++A    + + GR + A R F  M  +
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQED 271

Query: 156 ---GI-EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
              G+  P + T++VML GF  +  ++ A    + M+  G    V +YN  ++G  R  +
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
           + EA++L  EM  + I+P   +Y  ++ G     +A DA R+ + ++S  + P+ VTYT+
Sbjct: 332 VGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           LL   C  G +    ++L EM ++   P ++  +  LL    ++G    A  +L+ M   
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAP-NSFTYNVLLQSLWRAGRTTEAERLLERMNEK 450

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE-----------IILRPQSTLDM-- 378
               +     I+I+  C+    D A+ ++D + E+            + +   S++    
Sbjct: 451 GYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRC 510

Query: 379 --EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
             +  +Y+ +I  LC  G+  +A+    +++ K +  D V ++  I G+ K G    A +
Sbjct: 511 LPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIK 570

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +++ M ++G       Y  LI  +  K +  +    +  M E G SP    + S+++S  
Sbjct: 571 VLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFC 630

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
           + G V  A  ++  M++  +  N+     +++A         A    D  +++       
Sbjct: 631 QQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVL 690

Query: 554 FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIM 613
           +  + + L+  GK I A  +L+  L     I    Y++++  L   G+  +A+S+L  ++
Sbjct: 691 YCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLI 750

Query: 614 EKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
            K  + D  +   +I  L   G  +  D+LS
Sbjct: 751 AKRHLFDPAAFMPVIDALGDRGKKQDVDMLS 781



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 142/577 (24%), Positives = 258/577 (44%), Gaps = 42/577 (7%)

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQW-------DEDMFEVLIESYGKKGIVQESVKIFD 115
           I  L + G++  A  I  DM +    W       D+  F+V++  +   G V E+  + D
Sbjct: 249 ISALCKAGRVLDAYRIFQDMQE---DWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVD 305

Query: 116 IMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           IM+  G  R V+SY+     ++R GR   A+    +M  EGI+P  +TYN+++ G     
Sbjct: 306 IMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEG 365

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           K   A R    ++S  +S DVVTY ++++ Y     +  A ++  EM +K   P   +Y 
Sbjct: 366 KAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYN 425

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
            +++      R  +A R+ + M       +      ++ GLC   ++     ++  M E 
Sbjct: 426 VLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWE- 484

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
                + S  +  LG    +  L+  +D   ++ +  +P +   Y ILI   CK   +D 
Sbjct: 485 -----EGSGALGRLG----NSFLSVVSD--SSISQRCLPDQI-TYSILISALCKEGRFDE 532

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV 415
           A K L +++ K+I   P S +      Y+  I   C +G+T  A    R + KKG  +P 
Sbjct: 533 AKKKLLEMIVKDI--SPDSVI------YDTFIHGYCKHGKTSLAIKVLRDMEKKGC-NPS 583

Query: 416 --AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
              +N LIRG  ++   +   +++  M  +G+  +   Y  LI+S+ ++G    A   LD
Sbjct: 584 TRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLD 643

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK-GVKENLDLVAKILEALLMR 532
            M+++   P  + F  ++++  +     +A  V  + +   G KE L  +  +   L   
Sbjct: 644 EMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCL--MCTELTTY 701

Query: 533 GHVEEALGRIDLMMQS----GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLAS 588
           G   EA   +++ ++      S P +  ++S L E G+   A  LL   + +  + D A+
Sbjct: 702 GKWIEAKNILEMALEMRVSIQSFP-YKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAA 760

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +  V+DAL   GK  +   +  K+ME     D   +D
Sbjct: 761 FMPVIDALGDRGKKQDVDMLSAKMMEMADRNDGLGTD 797



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 214/496 (43%), Gaps = 33/496 (6%)

Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
           + L+    PT   YN ++       +L+     ++D+   G   DV T N ++       
Sbjct: 100 RALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAG 159

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
           +M+ A+++F  M  +N      S+  + +GY    R+ DAL++ D M S     N V   
Sbjct: 160 RMELAQRVFDAMPARN----EFSFGILARGYCRAGRSIDALKVLDGMPSM----NLVVCN 211

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            ++ G C  G + E ++++  M  + + P +   F   +   CK+G +  A  + + M  
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAP-NVVTFNARISALCKAGRVLDAYRIFQDMQE 270

Query: 331 -----LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
                L  P +   + +++  FC A   D A  L+D       I+R    L     SYN 
Sbjct: 271 DWQHGLPRPDQV-TFDVMLSGFCDAGFVDEARVLVD-------IMRCGGFL-RRVESYNR 321

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
            +  L  NG+ G+A+   R++  +G+  +   +N ++ G  KEG    A  +   +    
Sbjct: 322 WLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGV 381

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +  D   Y  L+ +Y  KG  A A   LD M + G +P S  +  +++SL+  GR   A 
Sbjct: 382 MSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAE 441

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEK 564
           R+++ M EKG   +      I++ L     ++ A+  +D M + GS          L   
Sbjct: 442 RLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGS--------GALGRL 493

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G +  +V + D  + + C+ D  +Y  ++ AL   G+   A   L +++ K    D    
Sbjct: 494 GNSFLSV-VSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIY 552

Query: 625 DKLIAGLNQEGNTKQA 640
           D  I G  + G T  A
Sbjct: 553 DTFIHGYCKHGKTSLA 568



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 210/471 (44%), Gaps = 27/471 (5%)

Query: 46  VERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKG 105
           + R G F    E++ + +  L R G++  A+ +L +M  +G+Q +   + +++    K+G
Sbjct: 306 IMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEG 365

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
              ++ ++ + ++   +   V +Y +L      +G    A R  ++M  +G  P   TYN
Sbjct: 366 KAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYN 425

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
           V+L   + + +   A R  E M  +G SLD    N +I+G  R  ++D A  +   M E 
Sbjct: 426 VLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWE- 484

Query: 226 NIEPTVISYTTMIKGYVAVERADDALR--IFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
                        +G  A+ R  ++    + D   S    P+ +TY+ L+  LC  G+  
Sbjct: 485 -------------EGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFD 531

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E +K L EM+ + I P D+ ++   +   CK G  + A  VL+ M +         Y +L
Sbjct: 532 EAKKKLLEMIVKDISP-DSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLL 590

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I  F +    +  +KL+ ++ EK I             +YN +I+  C  G   KA    
Sbjct: 591 IRGFEEKHKSEEIMKLMSEMKEKGI--------SPNVMTYNSLIKSFCQQGMVNKAMPLL 642

Query: 404 RQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
            ++++  ++  + +F+ LI+ + K  +  SA ++V     R   +    Y  +       
Sbjct: 643 DEMLQNELVPNITSFDLLIKAYCKITDFPSA-QMVFDAALRTCGQKEVLYCLMCTELTTY 701

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
           G+  +AK  L+  +E   S  S  ++ ++  L E G V  A  ++K ++ K
Sbjct: 702 GKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAK 752


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 224/483 (46%), Gaps = 27/483 (5%)

Query: 73  NHARCIL---LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           NH   +L     M  KGV+ D     +LI  Y   G +  +  +F  + ++G+  + K  
Sbjct: 81  NHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVN 140

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           +AL               + + +L+ G      TY +++ G     +   A++    ++ 
Sbjct: 141 EALL--------------FHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEG 186

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           + ++ +VV Y+T+I+G  + K + +A  L++EM  K I PTV++++++I G+  V +  D
Sbjct: 187 KLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKD 246

Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
           A R+F+EM   ++ P+A T+  L+  LC  GK+ E + V+  M++  + P     +  L+
Sbjct: 247 AFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTV-VTYNTLM 305

Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
              C    +  A  VL  + R+ +   +  Y I+I  FCK +M D A+ L  ++  + I 
Sbjct: 306 DGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIA 365

Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
             P         +YN +I  LC  G+   A     ++    +  D V +N+LI    K  
Sbjct: 366 --PHKV------TYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQ 417

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
           + D A  +VK +   G+  +   Y  LI+   + G+  +A+     ++  G++  +  + 
Sbjct: 418 HVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYN 477

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQS 548
            ++  L ++G    A  ++  M + G+  +      I++AL  +   E+A   +  M+  
Sbjct: 478 IMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIK 537

Query: 549 GSV 551
           G V
Sbjct: 538 GVV 540



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 201/418 (48%), Gaps = 13/418 (3%)

Query: 29  VLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
            L+G  N   AL F   V   G F+ +  T+  +I  L ++G+   A  +L  +  K V 
Sbjct: 134 CLNGKVN--EALLFHDHVLALG-FHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVN 190

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            +  M+  +I+   K  +V ++  ++  M    +  +V ++ +L       G++  A R 
Sbjct: 191 TNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRL 250

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+M+ + I P  +T+N+++       K++ A      M   G+   VVTYNT+++GY  
Sbjct: 251 FNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCL 310

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++ +A+ + + +    + P   SY  MI G+  ++  D+AL +F EM    + P+ VT
Sbjct: 311 VNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVT 370

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y +L+ GLC AG++    +++ EM    I P D   +  L+ V CK+ H++ A  ++K +
Sbjct: 371 YNSLIDGLCKAGRIPYAWELVDEMHNNCI-PADIVTYNSLIDVFCKNQHVDKAIALVKKI 429

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               I      Y ILI+  CK      A  +   L+ K          ++ A +YN MI 
Sbjct: 430 KEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIK--------GYNVNAWTYNIMIN 481

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
            LC  G   +AE+   ++   G++ D V +  +I+    +   + A ++++ M  +GV
Sbjct: 482 GLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/539 (23%), Positives = 237/539 (43%), Gaps = 44/539 (8%)

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFK-LILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
           +V  +V  F+ M+Q+    S+  ++ +   LI  +  Y        +M S+G++P   T 
Sbjct: 46  VVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTL 105

Query: 165 NVML---------------------WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
           ++++                      G  L+ K+  A+ F + + + G  L+ VTY  +I
Sbjct: 106 SILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILI 165

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NG  +  +   A ++  +++ K +   V+ Y+T+I G    +   DA  ++ EM    + 
Sbjct: 166 NGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIP 225

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P  VT+++L+ G C  GK  +  ++  EMV + I P D   F  L+   CK G +  A +
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINP-DAYTFNILVDALCKEGKIKEAKN 284

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           V+  M++  +      Y  L++ +C      +A  +L       II R +   +  + SY
Sbjct: 285 VIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLS------IISRMRVAPN--SRSY 336

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N MI   C      +A   F ++  +G+    V +N+LI G  K G    A+E+V  M  
Sbjct: 337 NIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN 396

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
             +P D   Y  LI+ + +      A   +  + E G  P    +  +++ L + G+++ 
Sbjct: 397 NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKN 456

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A  V + ++ KG   N      ++  L   G  +EA   +  M  +G +P+   +++++ 
Sbjct: 457 AQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQ 516

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL----NAYSILFKIME 614
            L  K +   A KLL   + +  ++      + L      G+TL    N  S+LF  +E
Sbjct: 517 ALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTL-----VGRTLNLGMNLISLLFSALE 570


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 130/555 (23%), Positives = 252/555 (45%), Gaps = 51/555 (9%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVER---SVKSYDALFKLIL 137
           ++   GV  +E    +LI+   ++  +Q++V     +++ G E    SV S++AL     
Sbjct: 225 EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTF---LRETGGEEFGPSVVSFNALMSGFC 281

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           + G   +AK +F  M+  G+ P  ++YN++L G  ++  +E A+ F  DM++ G+  D+V
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
           TYN + NG+     +  A K+   M    + P +++YT +I G+  +   +++ ++ ++M
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
            S  +K + VTYT LL  LC +G++ E   +L E              M+++G+  K   
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHE--------------MEVIGL--KPDL 445

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI---KLLDKLVEKEIILRPQS 374
           L  +   ++  I             L E  C   +Y  +     ++  L EK  I   Q 
Sbjct: 446 LTYSRGAVEEAIE------------LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 493

Query: 375 TLDMEASS--------YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGH 424
             D    S        YN MI      G  G+A   ++Q+++KG+  P  V FN+LI G 
Sbjct: 494 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGI-SPTIVTFNSLIYGF 552

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            K+G    A +++  +   G+   +  Y  L+  Y  +G+       L  M      P  
Sbjct: 553 CKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQ 612

Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
             +  V++ L ++GR+  + +++K M  +G+  +      ++++      +++A    + 
Sbjct: 613 ITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQ 672

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M+Q    P+   ++ L++ L   G    A +LL     +   +   +Y  ++ A  A G 
Sbjct: 673 MLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGD 732

Query: 602 TLNAYSILFKIMEKG 616
             NA     +++E+G
Sbjct: 733 VQNALVFFHQMVERG 747



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/543 (22%), Positives = 239/543 (44%), Gaps = 28/543 (5%)

Query: 16  ALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR----VG 70
            L+P  + +N++ + L  A + E AL+F   +E     NH  E  +    IL      +G
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDME-----NHGVEPDIVTYNILANGFRILG 354

Query: 71  KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
            ++ A  ++  M   G+  D   + +LI  + + G ++ES K+ + M   G++ S+ +Y 
Sbjct: 355 LISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYT 414

Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
            L   + + GR   A    ++M   G++P   TY+           +E AI  +E+M S+
Sbjct: 415 VLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSK 466

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
            I  +    + +I+G      + EA+  F  + + ++   +I Y  MI GY  +    +A
Sbjct: 467 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 526

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           +R + ++    + P  VT+ +L+ G C  GK+ E  K+L  +    + P  +  +  L+ 
Sbjct: 527 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT-SVTYTTLMN 585

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             C+ G +++  D+L  M   +I      Y ++++  CK      +++LL  +  +   L
Sbjct: 586 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARG--L 643

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGN 429
            P         +YN +IQ  C      KA     Q+++  +   PV +N LI G    GN
Sbjct: 644 FPDQI------TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGN 697

Query: 430 PDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRS 489
              A  ++  +  + +     AY  +I+++  KG+  +A      M+E G   +   + +
Sbjct: 698 LKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSA 757

Query: 490 VMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           V+  L +   +  A      M+  G+  + D+   +L A    G          +M++ G
Sbjct: 758 VINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCG 817

Query: 550 SVP 552
            +P
Sbjct: 818 LLP 820



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 132/645 (20%), Positives = 276/645 (42%), Gaps = 74/645 (11%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ------ 88
           NS+ AL  F  +     F H R +   +  ++ R G+    R +L  M ++         
Sbjct: 94  NSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSL 153

Query: 89  ----------WDED--MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
                     WD +  ++++L  +Y +  +V +++ +   MK L ++ S+ +Y++L    
Sbjct: 154 CELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL-YN 212

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
           LR    M     +N++ + G+    +T  +++ G     +L+ A+ F  +         V
Sbjct: 213 LRHTDIMW--DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSV 270

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           V++N +++G+ +   +D A+  F  M +  + P V SY  ++ G       ++AL   ++
Sbjct: 271 VSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND 330

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M++  V+P+ VTY  L  G    G +    KV++ M+   + P D   +  L+   C+ G
Sbjct: 331 MENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNP-DLVTYTILICGHCQMG 389

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL----VEKEIILRP 372
           ++  +  + + M+   +      Y +L+ + CK+   D A+ LL ++    ++ +++   
Sbjct: 390 NIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS 449

Query: 373 QSTLDMEASSYNPM---------------IQHLCHNGQTGKAEIFFRQLMKKGVLDPVA- 416
           +  ++     Y  M               I  L   G   +A+++F  + K  V + +  
Sbjct: 450 RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIIL 509

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N +I G++K GN   A    K +  +G+      +  LI  + +KG+ A+A   LD++ 
Sbjct: 510 YNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 569

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P S  + ++M    E+G + +   ++  M  K +K       +I   ++++G   
Sbjct: 570 VHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKP-----TQITYTVVVKG--- 621

Query: 537 EALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
                                   L ++G+   +V+LL +   R    D  +Y  V+ + 
Sbjct: 622 ------------------------LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 657

Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
             A     A+ +  ++++        + + LI GL   GN K AD
Sbjct: 658 CKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDAD 702



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/515 (21%), Positives = 239/515 (46%), Gaps = 23/515 (4%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           ++G ++ A+     M K G+  D   + +L+      G ++E+++  + M+  GVE  + 
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +Y+ L       G    A +   +ML  G+ P   TY +++ G      +E + +  E M
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            S+G+ L +VTY  +++   +  ++DEA  L  EM+   ++P +++Y+   +G V     
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS---RGAV----- 453

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
           ++A+ +++EM S  + PN+   +A++ GL + G + E Q     + +  +  ++  ++  
Sbjct: 454 EEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDV-AEEIILYNI 512

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           ++    K G++  A    K +I   I      +  LI  FCK      A+KLLD +  K 
Sbjct: 513 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI--KV 570

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
             L P S       +Y  ++   C  G          ++  K +    + +  +++G  K
Sbjct: 571 HGLVPTSV------TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCK 624

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
           EG    + +++K M  RG+  D   Y  +I+S+ +  +   A    + M++    P+   
Sbjct: 625 EGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVT 684

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           +  ++  L   G ++ A R++ ++ ++ ++        I++A   +G V+ AL     M+
Sbjct: 685 YNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMV 744

Query: 547 QSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCL 578
           + G   S+ ++ ++++ L ++   I   K   FC+
Sbjct: 745 ERGFEVSIRDYSAVINRLCKR-NLITDAKFF-FCM 777



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 2/179 (1%)

Query: 15  RALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R L P Q  +N V      A + + A Q    + +  L      T+  +I  L   G L 
Sbjct: 641 RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSL-QPSPVTYNVLINGLCVYGNLK 699

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +L+ +  + ++  +  +  +I+++  KG VQ ++  F  M + G E S++ Y A+ 
Sbjct: 700 DADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVI 759

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
             + +R     AK +F  ML+ GI P +    VML  F  S    +    F  M   G+
Sbjct: 760 NRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGL 818


>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 129/535 (24%), Positives = 227/535 (42%), Gaps = 10/535 (1%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W +  +  I  L  + DH LV+ VL         +QFF+W  +   F HD  T++ +I  
Sbjct: 74  WGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQHFQHDSTTYMALIRC 133

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
           L   G ++     + DM +         +  +++  GK  +V +++ +F  +K      +
Sbjct: 134 LEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNPT 193

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRFF 184
              Y+ L  +++  G +      +N++ SEG   P   TY+ ++  F    + + A R F
Sbjct: 194 ATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLF 253

Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
           ++MK  G+      Y T++  Y +  K++ A +L  EMK K   PTV +YT +IKG   V
Sbjct: 254 DEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKV 313

Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
            R DDA  +F  M     KP+ V    L+  L  AG++ +  K+  +M      P   + 
Sbjct: 314 GRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTY 373

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
              +  +       + AA   + M    I   +  Y ILI+ FCK    ++A+ LL+++ 
Sbjct: 374 NTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMD 433

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPVAFNNLIRG 423
           EK     P        ++Y  +I  L    +   A   F++L +  G      +  +I+ 
Sbjct: 434 EKGFPPCP--------AAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKH 485

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
               G    A ++   M + G   D   Y  L+   +R G   +A + + +M E+G +P 
Sbjct: 486 FGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPD 545

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
                 ++  L + G  + A  +   M E  +  +      IL  L   G  E A
Sbjct: 546 IKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMA 600



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 99/211 (46%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M   G+      + +LI+ + K   V++++ + + M + G      +Y +L   + R  R
Sbjct: 397 MKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKR 456

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
           Y  A   F ++       +   Y VM+  F    +L  A+  F +MK  G S DV TYN 
Sbjct: 457 YEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNA 516

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +++G  R   +DEA  L   M+E    P + S+  ++ G         A+ +F +MK  +
Sbjct: 517 LMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESE 576

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
           + P+AV+Y  +L  L  AG      K++REM
Sbjct: 577 IMPDAVSYNTILSCLSRAGMFEMAAKLMREM 607



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/363 (19%), Positives = 158/363 (43%), Gaps = 14/363 (3%)

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D++ +M L+    +SG ++     ++ MIR         +  +++   KA+M ++A+ + 
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVF 182

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFN 418
            ++  ++    P +T+      YN +I  L H G   K    + ++  +G   P  + ++
Sbjct: 183 YQIKGRKC--NPTATV------YNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYS 234

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            LI    K    D AF +   M   G+      Y  ++  Y +  +   A   ++ M   
Sbjct: 235 ALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGK 294

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           G +P    +  +++ L + GRV  A  +  +M++ G K ++ L+  ++  L   G +E+A
Sbjct: 295 GCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDA 354

Query: 539 L---GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA-SYEKVLD 594
           L   G++D +  + +V  +++++  + E     +   L    +  + I   + +Y  ++D
Sbjct: 355 LKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILID 414

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
                 +   A  +L ++ EKG      +   LI  L +    + A+ L + ++    R 
Sbjct: 415 GFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRS 474

Query: 655 SQK 657
           S +
Sbjct: 475 SAR 477


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/463 (22%), Positives = 213/463 (46%), Gaps = 14/463 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  +++S+ K      +V +   ++  G++  + + + L       G+         K+L
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P   T N ++ G  L  +++ A+ F + + ++G  L+ V+Y T+ING  +     
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR 181

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A KL  ++  +  +P V+ Y+T+I      +   +A  +F EM    +  + VTY+ L+
Sbjct: 182 AAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 241

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  GK+ E   +L EMV + I P +   +  L+   CK G +  A  VL  M++  +
Sbjct: 242 YGFCIEGKLKEAIGLLNEMVLKTINP-NVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM--EASSYNPMIQHLC 391
             +   Y  L++ +           L+ ++ + + +    S + +  +  +Y  +I   C
Sbjct: 301 KPDVITYSTLMDGYF----------LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 392 HNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            N    +A   F+++ +K ++   V +++LI G  K G     ++++  M  RG P +  
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVI 410

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  LI+   + G    A    + M + G  P +  F  +++ L + GR++ A  V + +
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           + KG   N+     +++    +G +EEAL  +  M  +G +P+
Sbjct: 471 LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 194/408 (47%), Gaps = 13/408 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T +K + + G+V K  H    LL    +G Q ++  +  LI    K G  + ++K+   +
Sbjct: 134 TLIKGLCLKGQVKKALHFHDKLL---AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKI 190

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
                + +V  Y  +   + +      A   F++M  +GI     TY+ +++GF +  KL
Sbjct: 191 DGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKL 250

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + AI    +M  + I+ +V TYN +++   +  K+ EA+ + A M +  ++P VI+Y+T+
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTL 310

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + GY  V     A  +F+ M    V P+  TYT L+ G C    + E   + +EM ++ +
Sbjct: 311 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P     +  L+   CKSG +    D++  M     P     Y  LI+  CK    DRAI
Sbjct: 371 VPGI-VTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAI 429

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            L +K+ ++ I  RP +       ++  ++  LC  G+   A+  F+ L+ KG  L+   
Sbjct: 430 ALFNKMKDQGI--RPNTF------TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +N +I GH K+G  + A  ++  M   G   DA  +  +I +  +K E
Sbjct: 482 YNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/487 (22%), Positives = 211/487 (43%), Gaps = 13/487 (2%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML     P    +N +L  F       TA+     ++ +GI  D++T N +IN +  
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++     + A++ ++   P  ++  T+IKG     +   AL   D++ +   + N V+
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 166

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ G+C  G      K+L+++  R   P +  ++  ++   CK   ++ A  +   M
Sbjct: 167 YGTLINGVCKIGDTRAAIKLLQKIDGRLTKP-NVVMYSTIIDALCKYQLVSEAYGLFSEM 225

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               I  +   Y  LI  FC       AI LL+++V K        T++    +YN ++ 
Sbjct: 226 TVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK--------TINPNVYTYNILVD 277

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G+  +A+     ++K  V  D + ++ L+ G+        A  +   M   GV  
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  LI  + +     +A      M +    P    + S+++ L + GR+     ++
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
             M ++G   N+   + +++ L   GH++ A+   + M   G  PN   F  LL  L + 
Sbjct: 398 DEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKG 457

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G+   A ++    L +   +++ +Y  ++D     G    A ++L K+ + G + D  + 
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTF 517

Query: 625 DKLIAGL 631
           + +I  L
Sbjct: 518 EIIIIAL 524



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/479 (21%), Positives = 201/479 (41%), Gaps = 29/479 (6%)

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMI--NGYNRF-------KKMDEAEKLFAEMKEK 225
           + L T +RF        +SL +  +++ +  + ++ F       + +D+A   F  M   
Sbjct: 1   MSLPTRLRF-------SVSLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCM 53

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
              P +I +  ++  +  ++    A+ +   ++   ++P+ +T   L+   C  G++   
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
             VL ++++R  PP D      L+   C  G +  A      ++          YG LI 
Sbjct: 114 FSVLAKILKRGYPP-DTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLIN 172

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CK      AIKLL K+  +  + +P   +      Y+ +I  LC      +A   F +
Sbjct: 173 GVCKIGDTRAAIKLLQKIDGR--LTKPNVVM------YSTIIDALCKYQLVSEAYGLFSE 224

Query: 406 LMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           +  KG+  D V ++ LI G   EG    A  ++  M  + +  +   Y  L+++  ++G+
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
             +AK+ L  M++    P    + ++M+  F    V+ A  V  +M   GV  ++     
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
           ++        V+EAL     M Q   VP    + SL+  L + G+      L+D    R 
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG 404

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              ++ +Y  ++D L   G    A ++  K+ ++G   +  +   L+ GL + G  K A
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 463



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 2/236 (0%)

Query: 62   MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
            +I     +G++     IL  + K+G   D   F  LI     KG V +++   D +   G
Sbjct: 967  LINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQG 1026

Query: 122  VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
             + +  SY  L   + + G    A +   K+     +P    YN ++        +  A 
Sbjct: 1027 FQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAY 1086

Query: 182  RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
              F +M  +GIS DVVTYNT+I G+    K+ EA  L  +M  K I P V +Y  ++   
Sbjct: 1087 GLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDAL 1146

Query: 242  V--AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
                 +  D++L +  +M+    K NAVT+  ++  L +  +  +V+K+L EM+ R
Sbjct: 1147 CKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIAR 1202



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 93/197 (47%)

Query: 85   KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            KG+Q D     +LI  +   G +  +  I   + + G      ++  L   +  +G+   
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 145  AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
            A  + +K+L++G +  + +Y  ++ G         AI+    +  R    DVV YNT+I+
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 205  GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
               + + + +A  LF EM  K I   V++Y T+I G+  V +  +A+ + ++M    + P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 265  NAVTYTALLPGLCDAGK 281
            N  TY  L+  LC  GK
Sbjct: 1135 NVRTYNILVDALCKEGK 1151



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 3/251 (1%)

Query: 121  GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
            G++  + + + L       G+         K+L  G  P   T+  ++ G  L  ++  A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 181  IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
            + F + + ++G  L+ V+Y T+ING  +      A KL  ++  +  +P V+ Y T+I  
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 241  YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                +    A  +F EM    +  + VTY  L+ G C  GK+ E   +L +MV + I P 
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 301  DNSVFMKLLGVQCKSGH--LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
              + +  L+   CK G   L+ +  +L  M        A  + I+I    + +  D+  K
Sbjct: 1136 VRT-YNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 359  LLDKLVEKEII 369
            LL +++ + ++
Sbjct: 1195 LLHEMIARGLL 1205



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 9/217 (4%)

Query: 179  TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            TA+     ++ +GI  D+ T N +IN +    ++     + A++ ++   P  I++TT+I
Sbjct: 944  TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003

Query: 239  KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
             G     + + AL   D++ +   + N V+Y  L+ G+C  G      K+LR++  R   
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTK 1063

Query: 299  PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
            P D  ++  ++   CK   ++ A  +   M    I  +   Y  LI  FC       AI 
Sbjct: 1064 P-DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 359  LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
            LL+K+V K        T++    +YN ++  LC  G+
Sbjct: 1123 LLNKMVLK--------TINPNVRTYNILVDALCKEGK 1151



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 127/313 (40%), Gaps = 47/313 (15%)

Query: 206  YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
            +N  K    A  L   ++ K I+P + +   +I  +  + +      I  ++      P+
Sbjct: 936  HNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPD 995

Query: 266  AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
             +T+T L+ GLC  G   +V K L                 KLL    +   LN  +   
Sbjct: 996  TITFTTLINGLCLKG---QVNKALH-------------FHDKLLA---QGFQLNQVS--- 1033

Query: 326  KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
                          YG LI   CK      AIKLL K+  +  + +P   +      YN 
Sbjct: 1034 --------------YGTLINGVCKIGDTRAAIKLLRKIDGR--LTKPDVVM------YNT 1071

Query: 386  MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
            +I  LC +    KA   F ++  KG+  D V +N LI G    G    A  ++  M  + 
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT 1131

Query: 445  VPRDADAYICLIESYLRKGEP-ADAKTALDSMIEDGHSPASSL-FRSVMESLFEDGRVQT 502
            +  +   Y  L+++  ++G+   D   ++ S +ED    A+++ F  ++ +LFE      
Sbjct: 1132 INPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDK 1191

Query: 503  ASRVMKSMVEKGV 515
              +++  M+ +G+
Sbjct: 1192 VEKLLHEMIARGL 1204



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 2/208 (0%)

Query: 52   FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
            ++ D  T   +I  L   G++N A      +  +G Q ++  +  LI    K G  + ++
Sbjct: 992  YHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 1051

Query: 112  KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
            K+   +     +  V  Y+ +   + +      A   F +M  +GI     TYN +++GF
Sbjct: 1052 KLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGF 1111

Query: 172  FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK--MDEAEKLFAEMKEKNIEP 229
             +  KL+ AI     M  + I+ +V TYN +++   +  K  +DE+  + ++M++   + 
Sbjct: 1112 CIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKA 1171

Query: 230  TVISYTTMIKGYVAVERADDALRIFDEM 257
              +++  +I      +  D   ++  EM
Sbjct: 1172 NAVTFEIIISALFEKDENDKVEKLLHEM 1199



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 4/154 (2%)

Query: 498  GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
            G++     ++  ++++G   +      ++  L ++G V +AL   D ++  G   N   +
Sbjct: 975  GQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSY 1034

Query: 555  DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
             +L++ + + G T AA+KLL    GR    D+  Y  ++DAL        AY + F++  
Sbjct: 1035 GTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNV 1094

Query: 615  KGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            KG   D  + + LI G    G  K+A  +L++M+
Sbjct: 1095 KGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMV 1128



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
           G++     V+  ++++G   +   +  +++ L ++G V++AL   D ++  G   N   +
Sbjct: 108 GQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 167

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
            +L++ + + G T AA+KLL    GR    ++  Y  ++DAL        AY +  ++  
Sbjct: 168 GTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTV 227

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
           KG   D  +   LI G   EG  K+A  +L+ M+
Sbjct: 228 KGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/241 (19%), Positives = 104/241 (43%), Gaps = 6/241 (2%)

Query: 382  SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
            + N +I   CH GQ         +++K+G   D + F  LI G   +G  + A      +
Sbjct: 963  TLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKL 1022

Query: 441  GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
              +G   +  +Y  LI    + G+   A   L  +      P   ++ +++++L +   V
Sbjct: 1023 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLV 1082

Query: 501  QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
              A  +   M  KG+  ++     ++    + G ++EA+G ++ M+     PN   ++ L
Sbjct: 1083 SKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNIL 1142

Query: 558  LSVLSEKGKTI--AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
            +  L ++GK +   ++ +L       C  +  ++E ++ AL    +      +L +++ +
Sbjct: 1143 VDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIAR 1202

Query: 616  G 616
            G
Sbjct: 1203 G 1203



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 6/241 (2%)

Query: 413  DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
            D    N LI      G     F I+  + +RG   D   +  LI     KG+   A    
Sbjct: 960  DLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFH 1019

Query: 473  DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
            D ++  G       + +++  + + G  + A ++++ +  +  K ++ +   I++AL   
Sbjct: 1020 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH 1079

Query: 533  GHVEEALG---RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASY 589
              V +A G    +++   S  V  +++L+      GK   A+ LL+  + +    ++ +Y
Sbjct: 1080 QLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTY 1139

Query: 590  EKVLDALLAAGKTL--NAYSILFKIMEKGGVTDWKSSDKLIAGL-NQEGNTKQADILSRM 646
              ++DAL   GK L   + S+L K+ + G   +  + + +I+ L  ++ N K   +L  M
Sbjct: 1140 NILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199

Query: 647  I 647
            I
Sbjct: 1200 I 1200


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 209/463 (45%), Gaps = 28/463 (6%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+      KL  A      + K G       F  L+     +  V E++ +F  M    
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM---- 76

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + +V ++  L   + R GR + A    ++M+ +G++P + TY  ++ G        +A+
Sbjct: 77  CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 182 RFFEDMKSRG-ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
                M+    I  DVV Y+ +I+G  +  +  +A+ LF EM++K I P +++Y+ MI G
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           + +  +  +A R+  EM    + P+ VT++ L+  L   G +   Q +L+EM+   + P 
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH-----------YGILIENFCK 349
             +    L G+ C SG L  A ++ KAM +  +  +A H           Y ILI     
Sbjct: 257 VVTCNTLLDGL-CDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLIN 315

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
              +  A +L +++  + I+  P +       +Y+ MI  LC   +  +A   F  +  K
Sbjct: 316 EGKFLEAEELYEEMPHRGIV--PDTV------TYSSMINGLCKQSRLDEATQMFDSMGSK 367

Query: 410 GVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
               P  V FN LI G+ K G  D   E+   MGRRG+  +A  YI LI  + + G    
Sbjct: 368 S-FSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           +      MI  G  P +   R+++  L+    ++ A  +++ +
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/486 (22%), Positives = 210/486 (43%), Gaps = 47/486 (9%)

Query: 84  KKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           K G+Q   D+  F +LI+ +     +  ++  F  + +LG   ++ +++ L   +    R
Sbjct: 6   KHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F++M     +P   T+  ++ G     ++  A+   + M   G+  + +TY T
Sbjct: 66  VSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 121

Query: 202 MINGYNRFKKMDEAEKLFAEMKE-KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           +++G  +      A  L  +M+E  +I+P V+ Y+ +I G     R  DA  +F EM+  
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+ VTY+ ++ G C +GK  E Q++L+EM+ R I P D   F  L+    K G LN+
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISP-DVVTFSGLINALVKEGDLNS 240

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A D+L+ MI   +         L++  C +     A+++   +         +S +D++A
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM--------QKSMMDIDA 292

Query: 381 S-SYN---PMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEI 436
           + ++N   P +Q                            +N LI G   EG    A E+
Sbjct: 293 THAFNGVEPDVQ---------------------------TYNILISGLINEGKFLEAEEL 325

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
            + M  RG+  D   Y  +I    ++    +A    DSM     SP    F +++    +
Sbjct: 326 YEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCK 385

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
            G V     +   M  +G+  N      ++      G++  +L     M+ SG  P+  +
Sbjct: 386 AGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTIT 445

Query: 557 LLSVLS 562
           + ++L+
Sbjct: 446 IRNMLT 451



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 134/294 (45%), Gaps = 14/294 (4%)

Query: 34  KNSEH--ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE 91
           K+  H  A   F  ++  G+F  D  T+  MI      GK + A+ +L +M  + +  D 
Sbjct: 164 KDGRHTDAQNLFIEMQDKGIF-PDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
             F  LI +  K+G +  +  +   M   GV  +V + + L   +   G+   A   F  
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282

Query: 152 MLSE-----------GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           M              G+EP   TYN+++ G     K   A   +E+M  RGI  D VTY+
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           +MING  +  ++DEA ++F  M  K+  P ++++ T+I GY      DD L +F EM   
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            +  NA+TY  L+ G    G +     + +EM+   + P   ++   L G+  K
Sbjct: 403 GIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSK 456



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 28/327 (8%)

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
           L IP +   + ILI+ FC       A+    KL +    L    TL     ++N ++  L
Sbjct: 9   LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTK----LGFHPTL----VTFNTLLHGL 60

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           C   +  +A   F Q+ K  V   V F  L+ G  +EG    A  ++  M   G+  +  
Sbjct: 61  CVEDRVSEALDLFHQMCKPNV---VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 117

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGH-SPASSLFRSVMESLFEDGRVQTASRVMKS 509
            Y  +++   + G+   A   L  M E  H  P   ++ ++++ L++DGR   A  +   
Sbjct: 118 TYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE 177

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ---SGSVPNFDSLLSVLSEKGK 566
           M +KG+  ++   + ++      G   EA   +  M+    S  V  F  L++ L ++G 
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK----------- 615
             +A  LL   +      ++ +   +LD L  +GK  +A   +FK M+K           
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE-MFKAMQKSMMDIDATHAF 296

Query: 616 -GGVTDWKSSDKLIAGLNQEGNTKQAD 641
            G   D ++ + LI+GL  EG   +A+
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAE 323



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 85/174 (48%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            GV+ D   + +LI     +G   E+ ++++ M   G+     +Y ++   + ++ R   
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A + F+ M S+   P   T+N ++ G+  +  ++  +  F +M  RGI  + +TY T+I 
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           G+ +   ++ +  +F EM    + P  I+   M+ G  + E    AL + +E++
Sbjct: 417 GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 108/270 (40%), Gaps = 41/270 (15%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKI 439
           S+N +I+  C   +   A   F +L K G   P  V FN L+ G   E     A ++   
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLG-FHPTLVTFNTLLHGLCVEDRVSEALDLFHQ 75

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M +  V      +  L+    R+G   +A   LD M+EDG  P    + ++++ + + G 
Sbjct: 76  MCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131

Query: 500 VQTASRVMKSMVE-KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL 558
             +A  +++ M E   +K ++ + + I++ L   G   +A      M   G  P      
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP------ 185

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
                                     D+ +Y  +++   ++GK   A  +L +++ +   
Sbjct: 186 --------------------------DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 619 TDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            D  +   LI  L +EG+   A D+L  MI
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMI 249



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 10/195 (5%)

Query: 39  ALQFFRWVERAGL-------FN---HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
           AL+ F+ ++++ +       FN    D +T+  +I  L   GK   A  +  +MP +G+ 
Sbjct: 276 ALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 335

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            D   +  +I    K+  + E+ ++FD M       ++ +++ L     + G        
Sbjct: 336 PDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F +M   GI     TY  ++ GF     +  ++  F++M S G+  D +T   M+ G   
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWS 455

Query: 209 FKKMDEAEKLFAEMK 223
            +++ +A  +  E++
Sbjct: 456 KEELKKALAMLEELQ 470


>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 192/405 (47%), Gaps = 13/405 (3%)

Query: 10  LQNKIRALVPQFDHNLVYNVLHGAKN-SEHALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           L+  + A   +    LV  VL   KN    A +FF W +R   F H +E++  +++ILG 
Sbjct: 67  LERPLTAFSQKITPGLVEQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKESYHILVDILGS 126

Query: 69  VGKLNHARCILLDMPK-KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
             +       L DM + +  +   ++F ++  +Y +  +  ++++ F  M   GV+  V 
Sbjct: 127 SKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVG 186

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
             D L  ++ +R     A+ +F+K+  E + P   TY++++ G+        A + FE+M
Sbjct: 187 DVDQLLYVLCKRKHVKQAQEFFDKVNVE-VMPNAKTYSILMRGWGDVGDSSEARKLFEEM 245

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           + RG ++DVV YN+++    +   +DEA KLF EM    + P   SY+  I+ Y  V   
Sbjct: 246 RERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDI 305

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
             A ++ D M+ +++ PN  TY  ++  LC + K+ E  ++L EM+ER + P D   +  
Sbjct: 306 HSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSP-DLWSYNA 364

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           +    C    +N A  ++  M + +   +   Y ++++   +   +DR   +   + E+ 
Sbjct: 365 IQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERG 424

Query: 368 IILRPQSTLDMEASSYNPMIQHLC-HNGQTGKAEIFFRQLMKKGV 411
                       AS+Y  M+   C   G+  +A  +F  ++  G+
Sbjct: 425 FY--------PAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGI 461



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 114/241 (47%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +L+  +G  G   E+ K+F+ M++ G    V +Y++L + + + G    A + F +M 
Sbjct: 222 YSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMG 281

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S G+ P   +Y++ +  +     + +A +  + M+   +  +V TYN ++    + +K+D
Sbjct: 282 SNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVD 341

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA +L  EM E+ + P + SY  +   +      + ALR+   M+  +  P+  TY  +L
Sbjct: 342 EAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVL 401

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             L   G+   V  V   M ER   P  ++  + + G   K G L  A    + MI   I
Sbjct: 402 KMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGI 461

Query: 334 P 334
           P
Sbjct: 462 P 462



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 4/282 (1%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
            L+Y VL   K+ + A +FF  V    + N   +T+  ++   G VG  + AR +  +M 
Sbjct: 190 QLLY-VLCKRKHVKQAQEFFDKVNVEVMPN--AKTYSILMRGWGDVGDSSEARKLFEEMR 246

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           ++G   D   +  L+E+  K G V E+ K+F  M   G+     SY    +         
Sbjct: 247 ERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIH 306

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A +  ++M    + P   TYN ++     S K++ A +  ++M  RG+S D+ +YN + 
Sbjct: 307 SAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQ 366

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
             +    ++++A +L + M+++N  P   +Y  ++K  + V R D    ++  M+     
Sbjct: 367 AFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFY 426

Query: 264 PNAVTYTALLPGLC-DAGKMVEVQKVLREMVERYIPPKDNSV 304
           P A TY  ++ G C   GK+ E  K    M++  IPP   +V
Sbjct: 427 PAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTV 468



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 122/553 (22%), Positives = 230/553 (41%), Gaps = 62/553 (11%)

Query: 125 SVKSYDALFKLILRRGRYM--MAKRYF--NKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           S K    L + +L+R + +   A R+F   K L  G E ++ +Y++++     S +    
Sbjct: 75  SQKITPGLVEQVLKRCKNLGFSAHRFFLWAKRLP-GFEHSKESYHILVDILGSSKQFPLI 133

Query: 181 IRFFEDMK-SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
             F  DM+ +R   +    +  +   Y R     +A + F +M +  ++  V     ++ 
Sbjct: 134 WDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLY 193

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
                +    A   FD++ + +V PNA TY+ L+ G  D G   E +K+  EM ER    
Sbjct: 194 VLCKRKHVKQAQEFFDKV-NVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCA- 251

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            D   +  LL   CK G+++ A  + + M    +  +A  Y I I  +C+      A ++
Sbjct: 252 VDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQV 311

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFN 418
           LD++    ++  P         +YN +++ LC + +  +A     +++++GV  D  ++N
Sbjct: 312 LDRMRRYNLV--PN------VFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYN 363

Query: 419 NLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED 478
            +   H      + A  ++  M +     D   Y  +++  LR G           M E 
Sbjct: 364 AIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEER 423

Query: 479 GHSPASSLFRSVMESLF--EDGRVQTASRVMKSMVEKGV-------------------KE 517
           G  PA+S + +VM   F  + G+++ A +  + M++ G+                    E
Sbjct: 424 GFYPAASTY-AVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSE 482

Query: 518 NLDLVAKILE----------ALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKT 567
            +D++A  +E          + +MRG  E+A GR  L  +  ++P+         E+G+ 
Sbjct: 483 QIDVLAGKMERSTSCVIQELSSVMRG--EKASGR--LRSEEQNLPS--------EERGEG 530

Query: 568 IAAVKLLD-FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
                L +   L R   I L     +L     A   L +  IL  +  K G+  W     
Sbjct: 531 YEYTWLTEGSSLSRMRPIFLVLGNHLLMIFGLAAIMLKSKDILIFLWHKAGIFMWPWILS 590

Query: 627 LIAGLNQEGNTKQ 639
           L+ G N +  ++Q
Sbjct: 591 LVKGNNSDKKSRQ 603



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 86/417 (20%), Positives = 168/417 (40%), Gaps = 35/417 (8%)

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           +Y  L+  L  + +   +   L +M E         +F  +    C++     A      
Sbjct: 116 SYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQ 175

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M    +    G    L+   CK +   +A +  DK V  E++  P       A +Y+ ++
Sbjct: 176 MGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDK-VNVEVM--PN------AKTYSILM 226

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
           +     G + +A   F ++ ++G  +D VA+N+L+    K GN D A+++ + MG  G+ 
Sbjct: 227 RGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLA 286

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            DA +Y   I +Y    +   A   LD M      P    +  +++ L +  +V  A ++
Sbjct: 287 PDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQL 346

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           +  M+E+GV  +L     I         V +AL  I  M +   +P+   ++ +L +L  
Sbjct: 347 LDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLR 406

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
            G+      +      R      ++Y  ++         L      F++M   G+  +  
Sbjct: 407 VGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSC 466

Query: 624 SDKL----IAGLNQEGNTKQADI---------------LSRMIRGEMSRGSQKEKKQ 661
           + +L    + GL   G ++Q D+               LS ++RGE + G  + ++Q
Sbjct: 467 TVELLRNRVIGL---GFSEQIDVLAGKMERSTSCVIQELSSVMRGEKASGRLRSEEQ 520


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 228/514 (44%), Gaps = 36/514 (7%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + VLI  + K G + ++V +F  MK  G+  +  + + L   +   G+   A + F +M 
Sbjct: 35  YNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQ 94

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY----NRF 209
           +    PT  ++N++L GFF++ ++  A+   +DM+    S+   TYN ++ G        
Sbjct: 95  AGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSA 154

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
            ++++A + F EMK   +EP + SY  ++       R  +A  +F  M      P+ +TY
Sbjct: 155 NRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTY 211

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
             L+ G C  G+  E Q +++E+++    P +   +  ++   CK   +  A +V   MI
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEP-NVFTYSIIINCYCKLDKVEEAWEVFMKMI 270

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKL---LDKLVEKEIILRPQSTLD--------- 377
             +    A  +  LI  FCKA M + AIKL   ++K+  K  I+   + +D         
Sbjct: 271 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 330

Query: 378 ---------MEAS-------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLI 421
                    +E +       +YN +IQ  C   +  +A  +F ++  K   + + ++ LI
Sbjct: 331 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILI 390

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
            G  K      A + ++ M   G       Y  LI  + + GE   A    + M   G +
Sbjct: 391 DGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCA 450

Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
           P + +F ++++ L +  R     R++  M  +G K ++     ++  L     VE+A   
Sbjct: 451 PNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 510

Query: 542 IDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLD 575
            D M  + +V  F+ L+  L  + K   A  +LD
Sbjct: 511 FDGMACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/555 (22%), Positives = 229/555 (41%), Gaps = 60/555 (10%)

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           +AL   ++   ++  A R F ++L+    P  HTYNV++ GF    ++  A+  F DMKS
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
            G+  +  T NT++ G     +M  A KLF EM+     PT  S+  +++G+    R  D
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 250 AL---------------------------------------RIFDEMKSFDVKPNAVTYT 270
           AL                                         F EMK+  V+P+  +Y 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            LL  L D+G+M E   +   M        D   +  L+   CK G    A  ++K +++
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT----CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
                    Y I+I  +CK +  + A ++  K++E   +  P       A ++N +I   
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCV--PN------AVTFNTLIAGF 288

Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE-GNPDSAFEIVKIMGRRGVPRD 448
           C  G    A   F ++ K G     V +N LI    K+ G   +A ++   +   G+   
Sbjct: 289 CKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPT 348

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  LI+ +      ++A    D M E   +P    +  +++ L +  R++ A++ ++
Sbjct: 349 IVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLE 407

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
            M   G    +     ++      G ++ AL   + M  +G  PN   F++L+  L +  
Sbjct: 408 DMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAE 467

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +    ++LL       C  D+ +Y  ++  L +A +  +A  +   +     VT +   +
Sbjct: 468 RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACAPNVTTF---N 524

Query: 626 KLIAGLNQEGNTKQA 640
            LI GL  +   ++A
Sbjct: 525 FLIRGLCAQKKVEEA 539



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 143/307 (46%), Gaps = 40/307 (13%)

Query: 25  LVYNVLHGA----KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YNVL         +  A    + + +AG +  +  T+  +I    ++ K+  A  + +
Sbjct: 209 MTYNVLMDGYCKIGQTYEAQSLMKEILKAG-YEPNVFTYSIIINCYCKLDKVEEAWEVFM 267

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF-KLILRR 139
            M +     +   F  LI  + K G++++++K+F  M+++G + ++ +Y+ L   L  +R
Sbjct: 268 KMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR 327

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF--------------- 184
           G    A   FNK+   G+ PT  TYN ++ GF  + +L  A+++F               
Sbjct: 328 GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYS 387

Query: 185 -------------------EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
                              EDMK+ G +  VVTY  +ING+ +  ++  A   F +MK  
Sbjct: 388 ILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLA 447

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
              P  + + T+I G    ERA+D LR+   M +   KP+ +TY  L+ GLC A ++ + 
Sbjct: 448 GCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDA 507

Query: 286 QKVLREM 292
           Q++   M
Sbjct: 508 QRLFDGM 514



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 160/356 (44%), Gaps = 23/356 (6%)

Query: 44  RWVERAGLFNH-----DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           R  E   LF+      D  T+  +++   ++G+   A+ ++ ++ K G + +   + ++I
Sbjct: 191 RMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIII 250

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
             Y K   V+E+ ++F  M +     +  +++ L     + G    A + F +M   G +
Sbjct: 251 NCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCK 310

Query: 159 PTRHTYNVMLWGFFLSLK---LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            T  TYN ++    L  K   + TA+  F  ++  G++  +VTYN++I G+   +++ EA
Sbjct: 311 ATIVTYNTLIDS--LCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEA 368

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            + F EM+ K   P VI+Y+ +I G   V R  +A +  ++MK+    P  VTY  L+ G
Sbjct: 369 MQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLING 427

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
            C  G++        +M      P +  +F  L+   CK+   N    +L  M       
Sbjct: 428 FCKCGELKSALLFFEKMKLAGCAP-NTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKP 486

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
           +   Y  LI   C A   + A +L D +        P  T      ++N +I+ LC
Sbjct: 487 DVITYNCLISGLCSANRVEDAQRLFDGMA-----CAPNVT------TFNFLIRGLC 531



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 5/187 (2%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           A+    A+Q+F  +E  G    +  T+  +I+ L +V ++  A   L DM   G      
Sbjct: 362 ARRLSEAMQYFDEME--GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVV 419

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
            +  LI  + K G ++ ++  F+ MK  G   +   ++ L   + +  R     R    M
Sbjct: 420 TYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHM 479

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            +EG +P   TYN ++ G   + ++E A R F+ M     + +V T+N +I G    KK+
Sbjct: 480 HAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKV 536

Query: 213 DEAEKLF 219
           +EA  + 
Sbjct: 537 EEARNIL 543


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 140/587 (23%), Positives = 253/587 (43%), Gaps = 55/587 (9%)

Query: 52  FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
           F  D   +  +I      G+   A  +   M ++G +     + V++  YGK G+    +
Sbjct: 29  FGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKI 88

Query: 112 K-IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
           K +F+ MK  GV     +Y+ L     R   +  A   F  M S G  P + TYN +L  
Sbjct: 89  KGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDV 148

Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
           +  S + + A+    +M+  G S  +VTYN++I+ Y R   + EA +L  +M E  I   
Sbjct: 149 YGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLD 208

Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
           V +YTT++ G+V   + + A+R+F EM++   KPN  T+ AL+    + GK  E+ KV  
Sbjct: 209 VFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268

Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           E+      P D   +  LL V  ++G  +  + V K M R     E   Y  LI  + + 
Sbjct: 269 EIKNSCCVP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRC 327

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL---- 406
             +D+A+ +  +++E  I      T D+  S+YN ++  L   G   ++E  F ++    
Sbjct: 328 GSFDQAMDIYKRMLEAGI------TPDL--STYNAVLAALARGGLWEQSEKIFAEMKDGR 379

Query: 407 ------------------------------MKKGVLDP--VAFNNLIRGHSKEG---NPD 431
                                         +  GV++P  V    L+  +SK       +
Sbjct: 380 CKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAE 439

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            AF  +K   R+G   D      ++  Y R+         L+ M E G +P+ + + S+M
Sbjct: 440 VAFLELK---RKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLM 496

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
                    + +  V+K ++ KG+K +      ++ A    G ++EA      M +SG V
Sbjct: 497 YMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLV 556

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
           P+   +++ ++  +       A+ ++ + +   C  +  +Y  V+D 
Sbjct: 557 PDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDG 603



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 119/542 (21%), Positives = 230/542 (42%), Gaps = 47/542 (8%)

Query: 17  LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
           L  ++ +N +          E A   F+ ++  G F  D+ T+  ++++ G+  +   A 
Sbjct: 101 LPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMG-FVPDKVTYNALLDVYGKSRRTKEAM 159

Query: 77  CILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
            +L +M   G       +  LI +Y + G+++E++++ + M + G+   V +Y  L    
Sbjct: 160 EVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGF 219

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
           +R G+   A R F +M + G +P   T+N ++       K    ++ FE++K+     D+
Sbjct: 220 VRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDI 279

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VT+NT++  + +     E   +F EMK     P   +Y T+I  Y      D A+ I+  
Sbjct: 280 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKR 339

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M    + P+  TY A+L  L   G   + +K+  EM +    P + +         C   
Sbjct: 340 MLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELT--------YCSLL 391

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL---------LDKLVEKE 367
           H  A    +  M+ L+            E  C   +   A+ L          D LVE E
Sbjct: 392 HAYANGKEIGRMLALA------------EEICSGVIEPHAVLLKTLVLVNSKCDLLVEAE 439

Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQT---GKAEIFFR-----QLMKKGVLDP--VAF 417
           +       L+++   ++P +  L  N      G+ ++F +       M +    P    +
Sbjct: 440 VAF-----LELKRKGFSPDLSTL--NAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATY 492

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N+L+  HS+  N + + E++K +  +G+  D  +Y  +I +Y R G   +A      M E
Sbjct: 493 NSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRE 552

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
            G  P    + + + S   D   + A  V++ M++ G K N +    +++      H ++
Sbjct: 553 SGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDD 612

Query: 538 AL 539
           A+
Sbjct: 613 AI 614



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/433 (22%), Positives = 196/433 (45%), Gaps = 11/433 (2%)

Query: 50  GLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQE 109
           G  N D  T+  ++    R GK   A  +  +M   G + +   F  LI+ +G +G   E
Sbjct: 203 GGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAE 262

Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
            +K+F+ +K       + +++ L  +  + G        F +M   G  P R TYN ++ 
Sbjct: 263 MMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLIS 322

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
            +      + A+  ++ M   GI+ D+ TYN ++    R    +++EK+FAEMK+   +P
Sbjct: 323 AYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKP 382

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
             ++Y +++  Y   +     L + +E+ S  ++P+AV    L+        +VE +   
Sbjct: 383 NELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAF 442

Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
            E+  +   P D S    +L +  +        ++L  M           Y  L+    +
Sbjct: 443 LELKRKGFSP-DLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSR 501

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
           +E ++R+ ++L +++ K I  +P +       SYN +I   C NG+  +A   F ++ + 
Sbjct: 502 SENFERSEEVLKEILAKGI--KPDTI------SYNTVIFAYCRNGRMKEASRIFSEMRES 553

Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
           G++ D + +N  +  ++ +   + A ++V+ M + G   + + Y  +++ Y +     DA
Sbjct: 554 GLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDA 613

Query: 469 KTALDSMIE-DGH 480
              + S+ E D H
Sbjct: 614 IMFISSLHELDPH 626



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 154/357 (43%), Gaps = 19/357 (5%)

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
           +V + +LG   K G ++ AA +L  + +     +   Y  LI        Y  A+ +  K
Sbjct: 2   AVIISMLG---KEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKK 58

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT-GKAEIFFRQLMKKGVL-DPVAFNNL 420
           + E+      + TL     +YN ++      G    K +  F  +   GVL D   +N L
Sbjct: 59  MEEEGC----KPTL----ITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTL 110

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I    +    + A  + K M   G   D   Y  L++ Y +     +A   L  M  +G 
Sbjct: 111 ITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGC 170

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
           SP+   + S++ +   DG ++ A  +   MVE G+  ++     +L   +  G  E A+ 
Sbjct: 171 SPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMR 230

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
               M  +G  PN   F++L+ +   +GK    +K+ +      C+ D+ ++  +L A+ 
Sbjct: 231 VFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLL-AVF 289

Query: 598 AAGKTLNAYSILFKIMEKGG-VTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMS 652
                 +  S +FK M++ G V +  + + LI+  ++ G+  QA DI  RM+   ++
Sbjct: 290 GQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGIT 346


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 219/457 (47%), Gaps = 14/457 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +++  Y     ++ ++K+   M   G+E +  +Y ++  L+   G+   A R    M+
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+      +  ++ GF     L  A  +F++M+ RG++ D VTY  +ING  R  ++ 
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EAE++  EM++K ++   ++YT +I GY  V +  +A  + ++M    V PN VTYTAL 
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM--KLLGVQCKSGHLNAAADVLKAMIRL 331
            GLC  G +    ++L EM  + +   + ++F    L+   CK+G+L  A   +  M   
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGL---ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            +  +   Y  +I   C+++  DRA  LL ++++K I  +P         +YN ++   C
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI--KPTIV------TYNVLMNGFC 576

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            +G+    +     +++K +  +   +N+L++ +  E N  S  EI K M  + V  + +
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  LI+ + +     +A      MIE G    +S + +++  L +  +   A R+ + M
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++ +    D+    ++      ++E  L   D +++
Sbjct: 697 RKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 164/334 (49%), Gaps = 2/334 (0%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A  +F  +++ GL   D  T+  +I  L R G+L  A  +L +M  KG+  D   + VLI
Sbjct: 374 ARNWFDEMQKRGL-AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + Y K G + E+  + + M Q  V  +V +Y AL   + ++G    A    ++M S+G+E
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
               TYN ++ G   +  LE A+R   DM   G+  DV TY T+I    + K++D A  L
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM +K I+PT+++Y  ++ G+    R +   R+ + M   ++ PN  TY +L+   C 
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
              M    ++ + M+ + + P +N+  + + G  CK+ ++  A      MI       A 
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKG-HCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
            Y  LI    K + +  A +L +K+ ++ +   P
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEP 705



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 197/439 (44%), Gaps = 23/439 (5%)

Query: 117 MKQLGVERSVKSYDA-LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           ++Q G+  S +S +A L +L L             ++  E  E    +YN++L     + 
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAV---------QLFQELPEKNTCSYNILLKALCTAG 267

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +++ A + F++M S     DVVTY  M++GY    +++ A KL +EM  + +E   ++YT
Sbjct: 268 RIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           ++I       +  DA+R+ ++M    V  +A  +T ++ G C  G +   +    EM +R
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            +   D   +  L+   C++G L  A  VL+ M    +  +A  Y +LI+ +CK      
Sbjct: 385 GLA-ADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A  + +K+V+K +             +Y  +   LC  G    A     ++  KG+ L+ 
Sbjct: 444 AFLVHNKMVQKRVT--------PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             +N+LI G  K GN + A   +  M   G+  D   Y  +I +  +  E   A + L  
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M++ G  P    +  +M      GRV+   R+++ M+EK +  N      +++   +  +
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 535 VEEALGRIDLMMQSGSVPN 553
           ++        M+    VPN
Sbjct: 616 MKSTTEIYKGMLSQEVVPN 634



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 222/473 (46%), Gaps = 20/473 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + E+V++F  +     E++  SY+ L K +   GR   A + F++M S    P   TY +
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           M+ G+    +LETAI+   +M +RG+ L+ V Y ++I       ++ +A ++  +M    
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           +      +TT++ G+        A   FDEM+   +  + VTYTAL+ GLC AG++ E +
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           +VL+EM ++ +   D   +  L+   CK G +  A  V   M++  +      Y  L + 
Sbjct: 411 RVLQEMEDKGLD-VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK      A +LL ++  K         L++   +YN +I  LC  G   +A      +
Sbjct: 470 LCKQGDVCAANELLHEMCSK--------GLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            + G+  D   +  +I    +    D A  +++ M  +G+      Y  L+  +   G  
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
              K  L+ M+E    P ++ + S+M+    +  +++ + + K M+ + V  N +    +
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 526 LEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLD 575
           ++      +++EAL     M++ G   +  ++++L+ +L++K K   A +L +
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFE 694



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 186/395 (47%), Gaps = 10/395 (2%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I +L   G+++ A  ++ DM   GV  D  +F  ++  + +KG +  +   FD M+
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           + G+     +Y AL   + R G    A+R   +M  +G++    TY V++ G+    K+ 
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A      M  + ++ +VVTY  + +G  +   +  A +L  EM  K +E  + +Y ++I
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLI 502

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G       + A+R   +M    +KP+  TYT ++  LC + ++     +L+EM+++ I 
Sbjct: 503 NGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIK 562

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P   + +  L+   C SG +     +L+ M+  +I      Y  L++ +C  +      +
Sbjct: 563 PTIVT-YNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
           +   ++ +E++  P        ++YN +I+  C      +A  F  ++++KG  L   ++
Sbjct: 622 IYKGMLSQEVV--PNE------NTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           N LIR  +K+     A  + + M +  +  + D Y
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 3/216 (1%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N + N L  A N E A++    ++ AGL   D  T+  +I  L +  +L+ A  +L 
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGL-KPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  KG++     + VL+  +   G V+   ++ + M +  +  +  +Y++L K      
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                   +  MLS+ + P  +TYN+++ G   +  ++ A+ F  +M  +G  L   +YN
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNI--EPTVISY 234
            +I   N+ KK  EA +LF +M+++ +  EP V ++
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 15/308 (4%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y IL++  C A     A +L D++     ++           +Y  M+   C   +   A
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMASPPDVV-----------TYGIMVHGYCTLSELETA 304

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                ++  +G+ L+PVA+ ++I     EG    A  +V+ M   GV  DA  +  ++  
Sbjct: 305 IKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSG 364

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           + RKG+ A A+   D M + G +     + +++  L   G ++ A RV++ M +KG+  +
Sbjct: 365 FCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVD 424

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
                 +++     G + EA    + M+Q    PN   + +L   L ++G   AA +LL 
Sbjct: 425 AVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLH 484

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
               +   +++ +Y  +++ L  AG    A   +  + E G   D  +   +I  L Q  
Sbjct: 485 EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 636 NTKQADIL 643
              +A  L
Sbjct: 545 ELDRAHSL 552


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 190/432 (43%), Gaps = 11/432 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
            L+FF +       NH   T+  ++  L +VG  + A+ +   M   G+  D  + E+L+
Sbjct: 92  GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            SY + G +  +    + +   G++ S   Y+ L  +++++     A   F + L     
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P  +++N+++ G     +++ A  FF++M + G   D+V+YNT+ING+ R  ++ +   L
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271

Query: 219 FAE-MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
             E M  K + P VI+YT++I GY  +     A  +FDEM S  +KPN  T+  L+ G  
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             G M     +  +M+     P D   F  L+   C+ G +N    + + M   ++    
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLP-DVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNV 390

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y +LI   CK      A   L  L   E++ +P          YNP+I   C  G+  
Sbjct: 391 YTYAVLINALCKENRIREARNFLRHLKSSEVVPKP--------FIYNPVIDGFCKAGKVD 442

Query: 398 KAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A     ++  KK   D + F  LI G+  +G    A      M       D      LI
Sbjct: 443 EANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLI 502

Query: 457 ESYLRKGEPADA 468
              L+ G P +A
Sbjct: 503 SCLLKAGMPNEA 514



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/461 (22%), Positives = 195/461 (42%), Gaps = 50/461 (10%)

Query: 111 VKIFDIMK-QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
           +K F+  +  L +  +  +YD L + + + G    AK  F+ M S+GI P      +++ 
Sbjct: 93  LKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVS 152

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
            +    KL++A  F  ++   GI +    YN ++N   +   +DEA  LF E  E    P
Sbjct: 153 SYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVP 212

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            V S+  +I+G   +   D A   F  M +F   P+ V+Y  L+ G C   ++ +   +L
Sbjct: 213 DVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLL 272

Query: 290 RE-MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           +E M+ + + P D   +  ++   CK G + AA+++   M+   I      + +LI+ F 
Sbjct: 273 KEDMLIKGVSP-DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K                                            G    A + + +++ 
Sbjct: 332 KV-------------------------------------------GNMRSAMVMYEKMLL 348

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G L D V F +LI G+ +EG  +   ++ + M  R +  +   Y  LI +  ++    +
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+  L  +      P   ++  V++   + G+V  A+ ++  M EK  + +      ++ 
Sbjct: 409 ARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILII 468

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
              M+G + EA+     M++   VP+    +SL+S L + G
Sbjct: 469 GNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAG 509



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 161/353 (45%), Gaps = 9/353 (2%)

Query: 18  VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           V  F +N + N+L      + A+  FR       F  D  +   +I  L R+G+++ A  
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFRE-HLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ----LGVERSVKSYDALF 133
              +M   G   D   +  LI  + +   V E  K  D++K+     GV   V +Y ++ 
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCR---VNEISKGHDLLKEDMLIKGVSPDVITYTSII 292

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
               + G    A   F++M+S GI+P   T+NV++ GF     + +A+  +E M   G  
Sbjct: 293 SGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCL 352

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DVVT+ ++I+GY R  ++++  KL+ EMK +N+ P V +Y  +I       R  +A   
Sbjct: 353 PDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNF 412

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
              +KS +V P    Y  ++ G C AGK+ E   ++ EM E+   P D   F  L+   C
Sbjct: 413 LRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRP-DKITFTILIIGNC 471

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
             G +  A      MI ++   +      LI    KA M + A ++    ++K
Sbjct: 472 MKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 92/426 (21%), Positives = 175/426 (41%), Gaps = 13/426 (3%)

Query: 180 AIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            ++FFE  ++   I+    TY+ ++    +    D A+ +F  M+   I P       ++
Sbjct: 92  GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
             Y  + + D A    +E+  + +K +   Y  LL  L     + E   + RE +E Y  
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D   F  L+   C+ G ++ A +  + M       +   Y  LI  FC+     +   
Sbjct: 212 P-DVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
           LL    +++++++  S    +  +Y  +I   C  G    A   F +++  G+  +   F
Sbjct: 271 LL----KEDMLIKGVSP---DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTF 323

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI G  K GN  SA  + + M   G   D   +  LI+ Y R+GE        + M  
Sbjct: 324 NVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKV 383

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
              SP    +  ++ +L ++ R++ A   ++ +    V     +   +++     G V+E
Sbjct: 384 RNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDE 443

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A   +  M +    P+   F  L+     KG+ + A+      +  +C+ D  +   ++ 
Sbjct: 444 ANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLIS 503

Query: 595 ALLAAG 600
            LL AG
Sbjct: 504 CLLKAG 509



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 153/378 (40%), Gaps = 14/378 (3%)

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           TY  L+  LC  G     + V   M    I P D+S+   L+    + G L++A + L  
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILP-DSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           +    I      Y  L+    K  + D A+ L  + +E   +         +  S+N +I
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV--------PDVYSFNILI 221

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK-IMGRRGV 445
           + LC  G+  KA  FF+ +   G   D V++N LI G  +        +++K  M  +GV
Sbjct: 222 RGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGV 281

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  +I  Y + G+   A    D M+  G  P    F  +++   + G +++A  
Sbjct: 282 SPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMV 341

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           + + M+  G   ++     +++     G V + L   + M      PN   +  L++ L 
Sbjct: 342 MYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALC 401

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           ++ +   A   L      + +     Y  V+D    AGK   A  I+ ++ EK    D  
Sbjct: 402 KENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKI 461

Query: 623 SSDKLIAGLNQEGNTKQA 640
           +   LI G   +G   +A
Sbjct: 462 TFTILIIGNCMKGRMVEA 479


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 117/503 (23%), Positives = 228/503 (45%), Gaps = 15/503 (2%)

Query: 19  PQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           P F  +N+V +VL  A     AL  +R +           T       L R+G+ + A  
Sbjct: 137 PSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALA 196

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  M + G   D  +++ +I +   +G V E+  + + M  +G    V ++D + + + 
Sbjct: 197 LLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMC 256

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
             GR   A R  ++M+++G  P   TY  +L G     + + A      M  R   L+VV
Sbjct: 257 GLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVV 312

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +NT+I G     K+ EA +L+  M  K  +P   +Y+ ++ G   + R   A+R+  EM
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           +     PN VTYT +L   C  G   + + +L EM  + +   ++  +  ++   CK G 
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL-TLNSQGYNGMIYALCKDGR 431

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
           ++ A  +++ M       +   Y  +I + C  E  + A  + + L+E+ ++        
Sbjct: 432 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV-------- 483

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEI 436
               +YN +I  L  +G+   A    ++++  G  LD V++N LI+   K+GN D +  +
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
           ++ M  +G+  +  +Y  LI    ++    DA      M+  G +P    + +++  L +
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 497 DGRVQTASRVMKSMVEKGVKENL 519
            G +  A  +++ +  + V  ++
Sbjct: 604 MGWMHAALNLLEKLHNENVHPDI 626



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 116/502 (23%), Positives = 225/502 (44%), Gaps = 22/502 (4%)

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS-EGIEPTRHTYNVMLWGFFLSLK 176
           ++ GV+ S +SY+ +  ++ R   +  A   + +M+  + + PT  T+ V         +
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
            + A+     M   G   D V Y T+I+       + EA  L  EM        V ++  
Sbjct: 191 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +++G   + R  +A R+ D M +    P  +TY  LL GLC   +  E     R M+ R 
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGR- 305

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           +P  +  +F  ++G     G L  A ++ + M       +A  Y IL+   CK      A
Sbjct: 306 VPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSA 365

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           ++LL ++ +K               +Y  ++   C NG          ++  KG+ L+  
Sbjct: 366 VRLLREMEKK--------GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N +I    K+G  D A  +++ M  +G   D  +Y  +I       +  +A+   +++
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA--KILEALLMRG 533
           +E+G       + +++ +L  DGR Q A R+ K M+  G   +LD+V+   +++A+   G
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC--SLDVVSYNGLIKAMCKDG 535

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYE 590
           +V+ +L  ++ M + G  PN   ++ L+S L ++ +   A++L    L +    D+ +Y 
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595

Query: 591 KVLDALLAAGKTLNAYSILFKI 612
            +++ L   G    A ++L K+
Sbjct: 596 TLINGLCKMGWMHAALNLLEKL 617



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 106/474 (22%), Positives = 210/474 (44%), Gaps = 19/474 (4%)

Query: 180 AIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN-IEPTVISYTTM 237
           A+   + +  R G+     +YN +++   R     +A  L+  M  ++ + PT  ++   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
            +    + RAD+AL +   M      P+AV Y  ++  LCD G + E   +L EM+    
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D + F  ++   C  G +  AA ++  M+          YG L++  C+    D A 
Sbjct: 242 A-ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVA 416
            +L ++ E  ++L            +N +I      G+  +A   +  +  KG   D   
Sbjct: 301 AMLGRVPELNVVL------------FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 348

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           ++ L+ G  K G   SA  +++ M ++G   +   Y  ++ S+ + G   D +  L+ M 
Sbjct: 349 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 408

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G +  S  +  ++ +L +DGR+  A  +++ M  +G   ++     I+  L     +E
Sbjct: 409 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 468

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA    + +++ G V N   +++++  L   G+   AV+L    +   C +D+ SY  ++
Sbjct: 469 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 528

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMI 647
            A+   G    +  +L ++ EKG   +  S + LI+ L +E   + A  LS+ +
Sbjct: 529 KAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 173/359 (48%), Gaps = 6/359 (1%)

Query: 9   RLQNKIRAL---VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGL--FNHDRETHLKMI 63
           R  ++ RA+   VP+ +  L   V+ G        +     E  GL     D  T+  ++
Sbjct: 294 RQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILM 353

Query: 64  EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
             L ++G++  A  +L +M KKG   +   + +++ S+ K G+  ++  + + M   G+ 
Sbjct: 354 HGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413

Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
            + + Y+ +   + + GR   A     +M S+G  P   +YN +++    + ++E A   
Sbjct: 414 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           FE++   G+  + +TYNT+I+   R  +  +A +L  EM        V+SY  +IK    
Sbjct: 474 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 533

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
               D +L + +EM    +KPN V+Y  L+  LC   ++ +  ++ ++M+ + + P D  
Sbjct: 534 DGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP-DIV 592

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
            +  L+   CK G ++AA ++L+ +   ++  +   Y ILI   CK  + D A  LL++
Sbjct: 593 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 2/296 (0%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A++  R +E+ G F  +  T+  ++    + G  +  R +L +M  KG+  +   +  +I
Sbjct: 365 AVRLLREMEKKG-FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            +  K G + E++ +   M+  G    + SY+ +   +    +   A+  F  +L EG+ 
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
               TYN ++       + + A+R  ++M   G SLDVV+YN +I    +   +D +  L
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM EK I+P  +SY  +I       R  DAL +  +M +  + P+ VTY  L+ GLC 
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
            G M     +L ++    + P D   +  L+   CK   L+ AA +L   +    P
Sbjct: 604 MGWMHAALNLLEKLHNENVHP-DIITYNILISWHCKVRLLDDAAMLLNRAMAAVCP 658


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 234/526 (44%), Gaps = 54/526 (10%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P + TY +++ GF  +  L+ AI+  E+MKS G   + V + T++ G     ++ EA + 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M  K+  P V++YT ++       + D+A  +  EM +    P+ VT++ L+ GLC 
Sbjct: 67  FRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC-KSGHLNAAADVLKAMIRLSIPTEA 337
            G   +  +VL ++++R +   D + F  ++   C K   +  A+ VL  +I        
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSD-AAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             + ++I  FCKA+  D A KLL+ ++EK  +  P         ++  +I  LC   + G
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV--PN------VFTFTILITGLCKANRVG 236

Query: 398 KAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A+    +++  G   + V ++ +I G  K+G  D A+E+ ++M RR  P +   +  LI
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 296

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSP--------------------ASSLFRSVMES--- 493
           +   +     +A+     M E G +P                    A  LF+++ ES   
Sbjct: 297 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 356

Query: 494 ---------LFED----GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
                    LF      GR+  A R+   +V+KG   +L     ++          E + 
Sbjct: 357 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 416

Query: 541 RIDLMMQSGSVPNFDSLLSVLS---EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
            ++ M   G  P  ++L +VL    E   T  A++L D    R C  D   Y  V++ + 
Sbjct: 417 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 476

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSS---DKLIAGLNQEGNTKQA 640
            A K   A ++L ++++K       SS   D L+  L Q G T  A
Sbjct: 477 RASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDA 522



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 137/638 (21%), Positives = 268/638 (42%), Gaps = 93/638 (14%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +LI  +   G +  ++++ + MK  G E +   +  L K +   GR + A  +F  M 
Sbjct: 12  YGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM- 70

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING-------- 205
           ++   P   TY  ++     + K + A     +M +RG + D VT++T+I+G        
Sbjct: 71  AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEE 130

Query: 206 ----------------------------YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
                                        N++  ++ A K+   +  K   PTV+ +  +
Sbjct: 131 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 190

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           I G+   +  D A ++ + M      PN  T+T L+ GLC A ++ E Q++L +MV    
Sbjct: 191 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGC 250

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
            P +   +  ++   CK G ++ A ++ + M R + P     + ILI+  CKA+  + A 
Sbjct: 251 SP-NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV--LDPV 415
           +L  ++  +E    P      +  +YN +I  LC + Q  +A   F+ + + GV   + V
Sbjct: 310 QLYHRM--RETGCAP------DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAV 361

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            ++ L  G++  G    A  I  ++  +G   D   Y  LI  Y +     +    ++ M
Sbjct: 362 TYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEM 421

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL---------------- 519
              G  P  +   +V+  LFE    + A ++  SM  +G  ++                 
Sbjct: 422 ASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKH 481

Query: 520 ----------------------DLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNF 554
                                   V  ++E+L   G  ++A   +  M + G   +V ++
Sbjct: 482 NKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSY 541

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
           + LLS LS   +   A ++ +  +      ++++   V+  L +A K  +AY ++ ++ +
Sbjct: 542 NGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 601

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMS 652
            G   D ++ + LI G  + G   +AD L+R +  EM+
Sbjct: 602 LGCCPDIETCNTLIGGYCKSG---RAD-LARKLLEEMT 635



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 129/600 (21%), Positives = 263/600 (43%), Gaps = 61/600 (10%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           H  +   L  A     AL+ FR + +      D  T+  ++  L + GK + A+ +L +M
Sbjct: 47  HTTLMKGLCDAGRVVEALEHFRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREM 104

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR--G 140
             +G   D   F  LI+   K G  +++ ++ + + Q G+  S    DA F+ I++R   
Sbjct: 105 IARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNS----DAAFETIIQRLCN 160

Query: 141 RYM---MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE------------ 185
           +Y    +A +    ++++G  PT   +N+++ GF  +  L++A +  E            
Sbjct: 161 KYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF 220

Query: 186 -----------------------DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
                                   M + G S +VVTY+T+ING  +  ++D+A +LF  M
Sbjct: 221 TFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 280

Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
           + +N  P V+++  +I G    +R ++A +++  M+     P+ +TY +L+ GLC + ++
Sbjct: 281 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQV 340

Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
            E  ++ + + E  +   +   +  L       G +  A  +   ++      +   Y  
Sbjct: 341 DEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTS 400

Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           LI  +CK       ++L++++  K    R         ++ + ++  L     T +A   
Sbjct: 401 LILEYCKTSRAVEVVELVEEMASKGFPPR--------VNTLSAVLGGLFEGNHTERAIQL 452

Query: 403 FRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIV-KIMGRRG--VPRDADAYICLIES 458
           F  +  +G   D + +N ++ G ++    + A  ++ +++ +R       + A   L+ES
Sbjct: 453 FDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVES 512

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
             + G   DAK  L  M E G + A S +  ++  L    R   A++V ++MV  G    
Sbjct: 513 LCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPE 572

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLD 575
           +  V  ++  L     V++A   +  M + G  P+    ++L+    + G+   A KLL+
Sbjct: 573 ISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLE 632



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/531 (21%), Positives = 234/531 (44%), Gaps = 44/531 (8%)

Query: 35  NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
           + E A +    V + G+ N D      +  +  +   +  A  +L  +  KG      MF
Sbjct: 128 SEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMF 187

Query: 95  EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
            ++I  + K   +  + K+ ++M + G   +V ++  L   + +  R   A++   KM++
Sbjct: 188 NLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVT 247

Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
            G  P   TY+ ++ G     +++ A   F+ M+ R    +VVT+N +I+G  + K+++E
Sbjct: 248 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 307

Query: 215 AEKLFAEMKEKNIEPTVI------------------------------------SYTTMI 238
           A +L+  M+E    P +I                                    +Y+T+ 
Sbjct: 308 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 367

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            GY A+ R  DA RIF  +      P+  TYT+L+   C   + VEV +++ EM  +  P
Sbjct: 368 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 427

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P+ N++   +LG   +  H   A  +  +M       +A  Y +++E   +A  +++A+ 
Sbjct: 428 PRVNTL-SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALA 486

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AF 417
           +L+++++K          +  +S+ + +++ LC  G+T  A+    ++ ++G    V ++
Sbjct: 487 VLEQVIDKR-----DRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSY 541

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N L+ G S+    D A ++ + M   G   +      +I       +  DA   +  M +
Sbjct: 542 NGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 601

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
            G  P      +++    + GR   A ++++ M E G++ N D    +LE 
Sbjct: 602 LGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN-DTTHDLLEC 651



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 18/137 (13%)

Query: 524 KILEALLMRGHVEEALGRIDLMMQ----------SGSVPNFDSLLSVLSEKGKTIAAVKL 573
           K    +L+RG    + G +D+ +Q           G+     +L+  L + G+ + A++ 
Sbjct: 9   KFTYGILIRGF--SSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
               + +DC  D+ +Y  ++ AL  AGK   A  +L +++ +G   D  +   LI GL +
Sbjct: 67  FR-AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 634 EGNTKQA-----DILSR 645
            G+ +QA     D++ R
Sbjct: 126 FGSEEQAFRVLEDVIQR 142


>gi|224122828|ref|XP_002318926.1| predicted protein [Populus trichocarpa]
 gi|222857302|gb|EEE94849.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 144/673 (21%), Positives = 295/673 (43%), Gaps = 58/673 (8%)

Query: 8   TRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILG 67
           T    KI++L  +   + +  VL    +   A++ F+W      FNH  +T+  +I  LG
Sbjct: 44  TDFDAKIQSLRNKLCPDYLIKVLKSTSDINSAVKLFKWASLQRRFNHTDDTYYWIIFKLG 103

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
               +        +M K      ED+   L++++ +   + E++++   M   G++ S+ 
Sbjct: 104 MAENVEEMEGFCQNMVKDRCPGVEDVLLSLVDAFVRNCRLNEALRVLFNMNLAGIKPSID 163

Query: 128 SYDALFKLILRRGR-YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
            ++ +   ++   R +      + +M+  G+ P+  T N +L   F + ++++A+  +  
Sbjct: 164 VFNFVLGALVEEKRGFQDVVFVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRR 223

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           +  +G   +  T+  +I G     ++D++  +  EM E    P +  + + I  +   +R
Sbjct: 224 INKKGCIPNSRTFEIVIKGLIAKNRVDDSVTILHEMLELGCLPELRFFRSTILLFCGEDR 283

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
               +R+F +MK  +  P+   Y AL+  LC   ++ E   +L EM+E  + P DN+VF+
Sbjct: 284 LQQGIRLFRKMKDSNFTPDPFIYGALIQCLCKHLRLDEAANLLEEMMESRLTP-DNNVFV 342

Query: 307 KLLGVQCKSGHLNAAADVLK-AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
            ++   CK G +N A  +L+   + ++ P  A     L+   C A+ +  A  LL+K+ E
Sbjct: 343 DIVNGFCKLGKINEAIKLLEDKHVHVTSPHNA-----LLRCCCDADKFFMAKGLLEKMSE 397

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHN-GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGH 424
           + I          +  S+N +I+ LC   G     E+  R ++   + D   ++ L+ G+
Sbjct: 398 RNID---------DCDSWNILIRWLCEKVGVMNAYELLGRMIISSLIPDCATYSALVAGN 448

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
            +    + A ++   +  +    D  +Y  LIE   R  +  +A      M E+  S  S
Sbjct: 449 CRLSKYEDALQLFLQLHAKFWILDPASYSELIEGLCRGEKYLEAVKVFCYMSENRCSLQS 508

Query: 485 SLFRSVMESLFEDGRVQTASRV-----------------------------------MKS 509
             F  ++E +   G +  A R+                                   +  
Sbjct: 509 LSFNMLIEGVCNMGMLNEAVRLQLLGYNSGTSCSNATCNYIMLGLSKSDKGKHMLAFLSQ 568

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKGK 566
           M+ +G   +++    ++++++ +  +++    +++M+  G VP+ D+   LLS L+   +
Sbjct: 569 MLVQGTNLDMEAYCILIQSMIAQKQIKDCTLFLNVMVNEGLVPDSDTLYKLLSCLANHSQ 628

Query: 567 TIAAVKLLDFCLGRDC-IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
                  LD  L  DC ++D A Y  +++ L   G    A+ +L  ++EKG V D  +  
Sbjct: 629 LYLISLSLDK-LVSDCEVLDSAMYNILINGLWKEGNKNEAHRLLDLMLEKGWVPDSMTHG 687

Query: 626 KLIAGLNQEGNTK 638
            LI   N+EG  K
Sbjct: 688 LLIGSGNREGTGK 700



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 93/445 (20%), Positives = 193/445 (43%), Gaps = 16/445 (3%)

Query: 32  GAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE 91
           G    +  ++ FR ++ +  F  D   +  +I+ L +  +L+ A  +L +M +  +  D 
Sbjct: 280 GEDRLQQGIRLFRKMKDSN-FTPDPFIYGALIQCLCKHLRLDEAANLLEEMMESRLTPDN 338

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
           ++F  ++  + K G + E++K+ +  K + V      ++AL +      ++ MAK    K
Sbjct: 339 NVFVDIVNGFCKLGKINEAIKLLED-KHVHV---TSPHNALLRCCCDADKFFMAKGLLEK 394

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           M    I+    ++N+++      + +  A      M    +  D  TY+ ++ G  R  K
Sbjct: 395 MSERNIDDC-DSWNILIRWLCEKVGVMNAYELLGRMIISSLIPDCATYSALVAGNCRLSK 453

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
            ++A +LF ++  K       SY+ +I+G    E+  +A+++F  M        ++++  
Sbjct: 454 YEDALQLFLQLHAKFWILDPASYSELIEGLCRGEKYLEAVKVFCYMSENRCSLQSLSFNM 513

Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL 331
           L+ G+C+ G + E  ++            + +    +LG+  KS         L  M+  
Sbjct: 514 LIEGVCNMGMLNEAVRLQLLGYNSGTSCSNATCNYIMLGLS-KSDKGKHMLAFLSQMLVQ 572

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
               +   Y ILI++    +        L+ +V + ++  P S       +   ++  L 
Sbjct: 573 GTNLDMEAYCILIQSMIAQKQIKDCTLFLNVMVNEGLV--PDS------DTLYKLLSCLA 624

Query: 392 HNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           ++ Q     +   +L+    VLD   +N LI G  KEGN + A  ++ +M  +G   D+ 
Sbjct: 625 NHSQLYLISLSLDKLVSDCEVLDSAMYNILINGLWKEGNKNEAHRLLDLMLEKGWVPDSM 684

Query: 451 AYICLIESYLRKGEPADAKTALDSM 475
            +  LI S  R+G      T +DS+
Sbjct: 685 THGLLIGSGNREGTGKGKLTYVDSI 709


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 190/432 (43%), Gaps = 11/432 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
            L+FF +       NH   T+  ++  L +VG  + A+ +   M   G+  D  + E+L+
Sbjct: 92  GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
            SY + G +  +    + +   G++ S   Y+ L  +++++     A   F + L     
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P  +++N+++ G     +++ A  FF++M + G   D+V+YNT+ING+ R  ++ +   L
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271

Query: 219 FAE-MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
             E M  K + P VI+YT++I GY  +     A  +FDEM S  +KPN  T+  L+ G  
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
             G M     +  +M+     P D   F  L+   C+ G +N    + + M   ++    
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLP-DVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNV 390

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y +LI   CK      A   L  L   E++ +P          YNP+I   C  G+  
Sbjct: 391 YTYAVLINALCKENRIREARNFLRHLKSSEVVPKP--------FIYNPVIDGFCKAGKVD 442

Query: 398 KAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A     ++  KK   D + F  LI G+  +G    A      M       D      LI
Sbjct: 443 EANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLI 502

Query: 457 ESYLRKGEPADA 468
              L+ G P +A
Sbjct: 503 SCLLKAGMPNEA 514



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 189/426 (44%), Gaps = 15/426 (3%)

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
           + +++L+ +  K G+   +  +FD M+  G+       + L     R G+   AK + N+
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
           +   GI+ +   YN +L        ++ A+  F +        DV ++N +I G  R  +
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229

Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV---ERADDALRIFDEMKSFDVKPNAVT 268
           +D+A + F  M      P ++SY T+I G+  V    +  D L+  ++M    V P+ +T
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLK--EDMLIKGVSPDVIT 287

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           YT+++ G C  G M    ++  EMV   I P D + F  L+    K G++ +A  + + M
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFT-FNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           + L    +   +  LI+ +C+    ++ +KL +++  +         L     +Y  +I 
Sbjct: 347 LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVR--------NLSPNVYTYAVLIN 398

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLD-PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC   +  +A  F R L    V+  P  +N +I G  K G  D A  IV  M  +    
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRP 458

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   +  LI     KG   +A +    MIE    P      S++  L + G    AS++ 
Sbjct: 459 DKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIK 518

Query: 508 KSMVEK 513
           ++ ++K
Sbjct: 519 QAALQK 524



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/461 (22%), Positives = 195/461 (42%), Gaps = 50/461 (10%)

Query: 111 VKIFDIMK-QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
           +K F+  +  L +  +  +YD L + + + G    AK  F+ M S+GI P      +++ 
Sbjct: 93  LKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVS 152

Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
            +    KL++A  F  ++   GI +    YN ++N   +   +DEA  LF E  E    P
Sbjct: 153 SYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVP 212

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            V S+  +I+G   +   D A   F  M +F   P+ V+Y  L+ G C   ++ +   +L
Sbjct: 213 DVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLL 272

Query: 290 RE-MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
           +E M+ + + P D   +  ++   CK G + AA+++   M+   I      + +LI+ F 
Sbjct: 273 KEDMLIKGVSP-DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K                                            G    A + + +++ 
Sbjct: 332 KV-------------------------------------------GNMRSAMVMYEKMLL 348

Query: 409 KGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G L D V F +LI G+ +EG  +   ++ + M  R +  +   Y  LI +  ++    +
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+  L  +      P   ++  V++   + G+V  A+ ++  M EK  + +      ++ 
Sbjct: 409 ARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILII 468

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
              M+G + EA+     M++   VP+    +SL+S L + G
Sbjct: 469 GNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAG 509



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 161/353 (45%), Gaps = 9/353 (2%)

Query: 18  VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
           V  F +N + N+L      + A+  FR       F  D  +   +I  L R+G+++ A  
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFRE-HLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ----LGVERSVKSYDALF 133
              +M   G   D   +  LI  + +   V E  K  D++K+     GV   V +Y ++ 
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCR---VNEISKGHDLLKEDMLIKGVSPDVITYTSII 292

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
               + G    A   F++M+S GI+P   T+NV++ GF     + +A+  +E M   G  
Sbjct: 293 SGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCL 352

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DVVT+ ++I+GY R  ++++  KL+ EMK +N+ P V +Y  +I       R  +A   
Sbjct: 353 PDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNF 412

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
              +KS +V P    Y  ++ G C AGK+ E   ++ EM E+   P D   F  L+   C
Sbjct: 413 LRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRP-DKITFTILIIGNC 471

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
             G +  A      MI ++   +      LI    KA M + A ++    ++K
Sbjct: 472 MKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 92/426 (21%), Positives = 175/426 (41%), Gaps = 13/426 (3%)

Query: 180 AIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            ++FFE  ++   I+    TY+ ++    +    D A+ +F  M+   I P       ++
Sbjct: 92  GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
             Y  + + D A    +E+  + +K +   Y  LL  L     + E   + RE +E Y  
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D   F  L+   C+ G ++ A +  + M       +   Y  LI  FC+     +   
Sbjct: 212 P-DVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
           LL    +++++++  S    +  +Y  +I   C  G    A   F +++  G+  +   F
Sbjct: 271 LL----KEDMLIKGVSP---DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTF 323

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI G  K GN  SA  + + M   G   D   +  LI+ Y R+GE        + M  
Sbjct: 324 NVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKV 383

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
              SP    +  ++ +L ++ R++ A   ++ +    V     +   +++     G V+E
Sbjct: 384 RNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDE 443

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A   +  M +    P+   F  L+     KG+ + A+      +  +C+ D  +   ++ 
Sbjct: 444 ANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLIS 503

Query: 595 ALLAAG 600
            LL AG
Sbjct: 504 CLLKAG 509



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 153/378 (40%), Gaps = 14/378 (3%)

Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
           TY  L+  LC  G     + V   M    I P D+S+   L+    + G L++A + L  
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILP-DSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           +    I      Y  L+    K  + D A+ L  + +E   +         +  S+N +I
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV--------PDVYSFNILI 221

Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK-IMGRRGV 445
           + LC  G+  KA  FF+ +   G   D V++N LI G  +        +++K  M  +GV
Sbjct: 222 RGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGV 281

Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
             D   Y  +I  Y + G+   A    D M+  G  P    F  +++   + G +++A  
Sbjct: 282 SPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMV 341

Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
           + + M+  G   ++     +++     G V + L   + M      PN   +  L++ L 
Sbjct: 342 MYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALC 401

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           ++ +   A   L      + +     Y  V+D    AGK   A  I+ ++ EK    D  
Sbjct: 402 KENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKI 461

Query: 623 SSDKLIAGLNQEGNTKQA 640
           +   LI G   +G   +A
Sbjct: 462 TFTILIIGNCMKGRMVEA 479


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 202/448 (45%), Gaps = 28/448 (6%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+      KL  A      + K G       F  L+     +  V E++ +F  M    
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM---- 76

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + +V ++  L   + R GR + A    ++M+ +G++P + TY  ++ G        +A+
Sbjct: 77  CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 182 RFFEDMKSRG-ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
                M+    I  DVV Y+ +I+G  +  +  +A+ LF EM++K I P +++Y+ MI G
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           + +  +  +A R+  EM    + P+ VT++ L+  L   G +   Q +L+EM+   + P 
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH-----------YGILIENFCK 349
             +    L G+ C SG L  A ++ KAM +  +  +A H           Y ILI     
Sbjct: 257 VVTCNTLLDGL-CDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLIN 315

Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
              +  A +L +++  + I+  P +       +Y+ MI  LC   +  +A   F  +  K
Sbjct: 316 EGKFLEAEELYEEMPHRGIV--PDTV------TYSSMINGLCKQSRLDEATQMFDSMGSK 367

Query: 410 GVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
               P  V FN LI G+ K G  D   E+   MGRRG+  +A  YI LI  + + G    
Sbjct: 368 S-FSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLF 495
           +      MI  G  P +   R+++  L+
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGLW 454



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/486 (22%), Positives = 210/486 (43%), Gaps = 47/486 (9%)

Query: 84  KKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           K G+Q   D+  F +LI+ +     +  ++  F  + +LG   ++ +++ L   +    R
Sbjct: 6   KHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A   F++M     +P   T+  ++ G     ++  A+   + M   G+  + +TY T
Sbjct: 66  VSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 121

Query: 202 MINGYNRFKKMDEAEKLFAEMKE-KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           +++G  +      A  L  +M+E  +I+P V+ Y+ +I G     R  DA  +F EM+  
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            + P+ VTY+ ++ G C +GK  E Q++L+EM+ R I P D   F  L+    K G LN+
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISP-DVVTFSGLINALVKEGDLNS 240

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A D+L+ MI   +         L++  C +     A+++   +         +S +D++A
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM--------QKSMMDIDA 292

Query: 381 S-SYN---PMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEI 436
           + ++N   P +Q                            +N LI G   EG    A E+
Sbjct: 293 THAFNGVEPDVQ---------------------------TYNILISGLINEGKFLEAEEL 325

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
            + M  RG+  D   Y  +I    ++    +A    DSM     SP    F +++    +
Sbjct: 326 YEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCK 385

Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
            G V     +   M  +G+  N      ++      G++  +L     M+ SG  P+  +
Sbjct: 386 AGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTIT 445

Query: 557 LLSVLS 562
           + ++L+
Sbjct: 446 IRNMLT 451



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 134/294 (45%), Gaps = 14/294 (4%)

Query: 34  KNSEH--ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE 91
           K+  H  A   F  ++  G+F  D  T+  MI      GK + A+ +L +M  + +  D 
Sbjct: 164 KDGRHTDAQNLFIEMQDKGIF-PDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222

Query: 92  DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
             F  LI +  K+G +  +  +   M   GV  +V + + L   +   G+   A   F  
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282

Query: 152 MLSE-----------GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           M              G+EP   TYN+++ G     K   A   +E+M  RGI  D VTY+
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           +MING  +  ++DEA ++F  M  K+  P ++++ T+I GY      DD L +F EM   
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
            +  NA+TY  L+ G    G +     + +EM+   + P   ++   L G+  K
Sbjct: 403 GIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSK 456



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 28/327 (8%)

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
           L IP +   + ILI+ FC       A+    KL +    L    TL     ++N ++  L
Sbjct: 9   LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTK----LGFHPTL----VTFNTLLHGL 60

Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
           C   +  +A   F Q+ K  V   V F  L+ G  +EG    A  ++  M   G+  +  
Sbjct: 61  CVEDRVSEALDLFHQMCKPNV---VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 117

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGH-SPASSLFRSVMESLFEDGRVQTASRVMKS 509
            Y  +++   + G+   A   L  M E  H  P   ++ ++++ L++DGR   A  +   
Sbjct: 118 TYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE 177

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ---SGSVPNFDSLLSVLSEKGK 566
           M +KG+  ++   + ++      G   EA   +  M+    S  V  F  L++ L ++G 
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK----------- 615
             +A  LL   +      ++ +   +LD L  +GK  +A   +FK M+K           
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE-MFKAMQKSMMDIDATHAF 296

Query: 616 -GGVTDWKSSDKLIAGLNQEGNTKQAD 641
            G   D ++ + LI+GL  EG   +A+
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAE 323



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 85/174 (48%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
            GV+ D   + +LI     +G   E+ ++++ M   G+     +Y ++   + ++ R   
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A + F+ M S+   P   T+N ++ G+  +  ++  +  F +M  RGI  + +TY T+I 
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           G+ +   ++ +  +F EM    + P  I+   M+ G  + E    AL + +E++
Sbjct: 417 GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 108/270 (40%), Gaps = 41/270 (15%)

Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKI 439
           S+N +I+  C   +   A   F +L K G   P  V FN L+ G   E     A ++   
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLG-FHPTLVTFNTLLHGLCVEDRVSEALDLFHQ 75

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M +  V      +  L+    R+G   +A   LD M+EDG  P    + ++++ + + G 
Sbjct: 76  MCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131

Query: 500 VQTASRVMKSMVE-KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLL 558
             +A  +++ M E   +K ++ + + I++ L   G   +A      M   G  P      
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP------ 185

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
                                     D+ +Y  +++   ++GK   A  +L +++ +   
Sbjct: 186 --------------------------DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 619 TDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
            D  +   LI  L +EG+   A D+L  MI
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMI 249



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 10/195 (5%)

Query: 39  ALQFFRWVERAGL-------FN---HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQ 88
           AL+ F+ ++++ +       FN    D +T+  +I  L   GK   A  +  +MP +G+ 
Sbjct: 276 ALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 335

Query: 89  WDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
            D   +  +I    K+  + E+ ++FD M       ++ +++ L     + G        
Sbjct: 336 PDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F +M   GI     TY  ++ GF     +  ++  F++M S G+  D +T   M+ G   
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWS 455

Query: 209 FKKMDEAEKLFAEMK 223
            +++  A  +  E++
Sbjct: 456 KEELKRALAMLEELQ 470


>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
          Length = 949

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 136/621 (21%), Positives = 266/621 (42%), Gaps = 68/621 (10%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M++  GR G ++ AR     M  +G+     ++  LI +Y     + E++     MK+ G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNK------------------------------ 151
           +E S+ +Y  +     + G    A  +F++                              
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434

Query: 152 -----MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
                M  EGI+     Y+ M+ G+ +    +  +  F+ +K  G +  VVTY  +IN Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494

Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
            +  K+ +A ++   MKE+ ++  + +Y+ MI G+V ++   +A  +F++M    +KP+ 
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554

Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVE-RYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
           + Y  ++   C  G M    + ++EM + R+ P      FM ++    KSG +  + +V 
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP--TTRTFMPIIHGYAKSGDMRRSLEVF 612

Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
             M R         +  LI    +     +A+++LD++          + +     +Y  
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKR---QAVEILDEMT--------LAGVSANEHTYTK 661

Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           ++Q     G TGKA  +F +L  +G+ +D   +  L++   K G   SA  + K M  R 
Sbjct: 662 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 721

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +PR++  Y  LI+ + R+G+  +A   +  M ++G  P    + S + +  + G +  A+
Sbjct: 722 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 781

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
           + ++ M   GVK N+     +++        E+AL   + M   G  P+   +  LL+ L
Sbjct: 782 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 841

Query: 562 SEKGKTIAAV---KLLDFC---LGRDCIIDLAS---YEKVLDALLAAGKTLNAYSILFKI 612
             +     A     ++  C   +    I+D+ +   + K L  + A+G  L       + 
Sbjct: 842 LSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELT------ET 895

Query: 613 MEKGGVTDWKSSDKLIAGLNQ 633
           ++K    DW S       L+Q
Sbjct: 896 LQKTFPPDWSSHHHHHGFLDQ 916



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 123/547 (22%), Positives = 232/547 (42%), Gaps = 35/547 (6%)

Query: 25  LVYNVLHGA-KNSEHALQFFRWVERAGLFNH--DRETHLKMIEILGRVGKLNHARCILLD 81
           + Y+V+ G    + HA     W + A   +   +   + K+I    +   +  A  ++ +
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVRE 439

Query: 82  MPKKGVQWDEDMFEVLIESYG-----KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
           M ++G+     ++  +++ Y      KKG+V     +F  +K+ G   +V +Y  L  L 
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLV-----VFKRLKECGFTPTVVTYGCLINLY 494

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            + G+   A      M  EG++    TY++M+ GF        A   FEDM   G+  DV
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           + YN +I+ +     MD A +   EM++    PT  ++  +I GY        +L +FD 
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M+     P   T+  L+ GL +  + VE   +L EM    +   +++ + K++      G
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQAVE---ILDEMTLAGVSANEHT-YTKIMQGYASVG 670

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
               A +    +    +  +   Y  L++  CK+     A+ +  ++  + I   P+++ 
Sbjct: 671 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI---PRNSF 727

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
                 YN +I      G   +A    +Q+ K+GV  D   + + I   SK G+ + A +
Sbjct: 728 -----VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ 782

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
            ++ M   GV  +   Y  LI+ + R   P  A +  + M   G  P  +++  ++ SL 
Sbjct: 783 TIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLL 842

Query: 496 EDGRVQTA---SRVM---KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
               +  A   S VM   K MVE G+  ++       + L     +E + G +   +Q  
Sbjct: 843 SRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLC---KIEASGGELTETLQKT 899

Query: 550 SVPNFDS 556
             P++ S
Sbjct: 900 FPPDWSS 906



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/487 (21%), Positives = 198/487 (40%), Gaps = 16/487 (3%)

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
           +P+R  + +M+  +     +  A   FE M++RGI+     Y ++I+ Y   + MDEA  
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
              +MKE+ IE ++++Y+ ++ G+     A+ A   FDE K      NA  Y  ++   C
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
               M   + ++REM E  I          + G           AD  K ++      E 
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDG-------YTMVADEKKGLVVFKRLKEC 478

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
           G    ++   C   +Y +  K + K +E   +++ +  +     +Y+ MI          
Sbjct: 479 GFTPTVVTYGCLINLYTKVGK-ISKALEVSRVMKEEG-VKHNLKTYSMMINGFVKLKDWA 536

Query: 398 KAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
            A   F  ++K+G+  D + +NN+I      GN D A + VK M +         ++ +I
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
             Y + G+   +    D M   G  P    F  ++  L E    + A  ++  M   GV 
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK---RQAVEILDEMTLAGVS 653

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKL 573
            N     KI++     G   +A      +   G    +  +++LL    + G+  +A+ +
Sbjct: 654 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 713

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
                 R+   +   Y  ++D     G    A  ++ ++ ++G   D  +    I+  ++
Sbjct: 714 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 773

Query: 634 EGNTKQA 640
            G+  +A
Sbjct: 774 AGDMNRA 780



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/421 (21%), Positives = 176/421 (41%), Gaps = 16/421 (3%)

Query: 224 EKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
           EK  +P+   +  M+K Y        A   F+ M++  + P +  YT+L+        M 
Sbjct: 302 EKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMD 361

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
           E    +R+M E  I       +  ++G   K+GH  AA        R+     A  YG +
Sbjct: 362 EALSCVRKMKEEGI-EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           I   C+    +RA  L+ ++ E+ I        D   + Y+ M+          K  + F
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGI--------DAPIAIYHTMMDGYTMVADEKKGLVVF 472

Query: 404 RQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
           ++L + G     V +  LI  ++K G    A E+ ++M   GV  +   Y  +I  +++ 
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
            + A+A    + M+++G  P   L+ +++ +    G +  A + +K M +   +      
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592

Query: 523 AKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLG 579
             I+      G +  +L   D+M + G VP    F+ L++ L EK +   AV++LD    
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ---AVEILDEMTL 649

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ 639
                +  +Y K++    + G T  A+    ++  +G   D  + + L+    + G  + 
Sbjct: 650 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 709

Query: 640 A 640
           A
Sbjct: 710 A 710


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 219/457 (47%), Gaps = 14/457 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +++  Y     ++ ++K+   M   G+E +  +Y ++  L+   G+   A R    M+
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+      +  ++ GF     L  A  +F++M+ RG++ D VTY  +ING  R  ++ 
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EAE++  EM++K ++   ++YT +I GY  V +  +A  + ++M    V PN VTYTAL 
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM--KLLGVQCKSGHLNAAADVLKAMIRL 331
            GLC  G +    ++L EM  + +   + ++F    L+   CK+G+L  A   +  M   
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGL---ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            +  +   Y  +I   C+++  DRA  LL ++++K I  +P         +YN ++   C
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI--KPTIV------TYNVLMNGFC 576

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            +G+    +     +++K +  +   +N+L++ +  E N  S  EI K M  + V  + +
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  LI+ + +     +A      MIE G    +S + +++  L +  +   A R+ + M
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            ++ +    D+    ++      ++E  L   D +++
Sbjct: 697 RKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 164/334 (49%), Gaps = 2/334 (0%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A  +F  +++ GL   D  T+  +I  L R G+L  A  +L +M  KG+  D   + VLI
Sbjct: 374 ARNWFDEMQKRGL-AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + Y K G + E+  + + M Q  V  +V +Y AL   + ++G    A    ++M S+G+E
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
               TYN ++ G   +  LE A+R   DM   G+  DV TY T+I    + K++D A  L
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM +K I+PT+++Y  ++ G+    R +   R+ + M   ++ PN  TY +L+   C 
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
              M    ++ + M+ + + P +N+  + + G  CK+ ++  A      MI       A 
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKG-HCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
            Y  LI    K + +  A +L +K+ ++ +   P
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEP 705



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 197/439 (44%), Gaps = 23/439 (5%)

Query: 117 MKQLGVERSVKSYDA-LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           ++Q G+  S +S +A L +L L             ++  E  E    +YN++L     + 
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAV---------QLFQELPEKNTCSYNILLKALCTAG 267

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +++ A + F++M S     DVVTY  M++GY    +++ A KL +EM  + +E   ++YT
Sbjct: 268 RIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           ++I       +  DA+R+ ++M    V  +A  +T ++ G C  G +   +    EM +R
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            +   D   +  L+   C++G L  A  VL+ M    +  +A  Y +LI+ +CK      
Sbjct: 385 GLA-ADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A  + +K+V+K +             +Y  +   LC  G    A     ++  KG+ L+ 
Sbjct: 444 AFLVHNKMVQKRVT--------PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             +N+LI G  K GN + A   +  M   G+  D   Y  +I +  +  E   A + L  
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M++ G  P    +  +M      GRV+   R+++ M+EK +  N      +++   +  +
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 535 VEEALGRIDLMMQSGSVPN 553
           ++        M+    VPN
Sbjct: 616 MKSTTEIYKGMLSQEVVPN 634



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 222/473 (46%), Gaps = 20/473 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + E+V++F  +     E++  SY+ L K +   GR   A + F++M S    P   TY +
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           M+ G+    +LETAI+   +M +RG+ L+ V Y ++I       ++ +A ++  +M    
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           +      +TT++ G+        A   FDEM+   +  + VTYTAL+ GLC AG++ E +
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           +VL+EM ++ +   D   +  L+   CK G +  A  V   M++  +      Y  L + 
Sbjct: 411 RVLQEMEDKGLD-VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK      A +LL ++  K         L++   +YN +I  LC  G   +A      +
Sbjct: 470 LCKQGDVCAANELLHEMCSK--------GLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            + G+  D   +  +I    +    D A  +++ M  +G+      Y  L+  +   G  
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
              K  L+ M+E    P ++ + S+M+    +  +++ + + K M+ + V  N +    +
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 526 LEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLD 575
           ++      +++EAL     M++ G   +  ++++L+ +L++K K   A +L +
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFE 694



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 186/395 (47%), Gaps = 10/395 (2%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I +L   G+++ A  ++ DM   GV  D  +F  ++  + +KG +  +   FD M+
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           + G+     +Y AL   + R G    A+R   +M  +G++    TY V++ G+    K+ 
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A      M  + ++ +VVTY  + +G  +   +  A +L  EM  K +E  + +Y ++I
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLI 502

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G       + A+R   +M    +KP+  TYT ++  LC + ++     +L+EM+++ I 
Sbjct: 503 NGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIK 562

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P   + +  L+   C SG +     +L+ M+  +I      Y  L++ +C  +      +
Sbjct: 563 PTIVT-YNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAF 417
           +   ++ +E++  P        ++YN +I+  C      +A  F  ++++KG  L   ++
Sbjct: 622 IYKGMLSQEVV--PNE------NTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           N LIR  +K+     A  + + M +  +  + D Y
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 3/216 (1%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N + N L  A N E A++    ++ AGL   D  T+  +I  L +  +L+ A  +L 
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGL-KPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  KG++     + VL+  +   G V+   ++ + M +  +  +  +Y++L K      
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                   +  MLS+ + P  +TYN+++ G   +  ++ A+ F  +M  +G  L   +YN
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNI--EPTVISY 234
            +I   N+ KK  EA +LF +M+++ +  EP V ++
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 15/308 (4%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y IL++  C A     A +L D++     ++           +Y  M+   C   +   A
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMASPPDVV-----------TYGIMVHGYCTLSELETA 304

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                ++  +G+ L+PVA+ ++I     EG    A  +V+ M   GV  DA  +  ++  
Sbjct: 305 IKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSG 364

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           + RKG+ A A+   D M + G +     + +++  L   G ++ A RV++ M +KG+  +
Sbjct: 365 FCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVD 424

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
                 +++     G + EA    + M+Q    PN   + +L   L ++G   AA +LL 
Sbjct: 425 AVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLH 484

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
               +   +++ +Y  +++ L  AG    A   +  + E G   D  +   +I  L Q  
Sbjct: 485 EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 636 NTKQADIL 643
              +A  L
Sbjct: 545 ELDRAHSL 552


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 133/588 (22%), Positives = 261/588 (44%), Gaps = 43/588 (7%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           MI   G  GK + A  +L     KG       +  ++   GKK  V+E+++IF+ MK+  
Sbjct: 96  MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 155

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  +V +Y+ L  ++ R G+   A    + M   G+ P   T N+M+     + KLE A 
Sbjct: 156 VP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC 214

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             FE M  +  + + VT++++I+G  +  ++D+A  L+ +M +    P  I YT++I+ +
Sbjct: 215 SIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSF 274

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R +D  +I+ EM      P+       +  +  AG+  + + + RE+      P  
Sbjct: 275 FKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDA 334

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            S  + + G+  K+G  N   ++  AM       +   Y  +I+ FCK+   ++A +LL+
Sbjct: 335 RSYSILIHGLV-KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLE 393

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
              E ++   P + +     +Y  +I  L    +  +A + F +    G+ L+ V +++L
Sbjct: 394 ---EMKVKGHPPTVV-----TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSL 445

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           I G  K G  D A+ I++ + ++G+  +   + CL+++ ++  E  +A     SM +   
Sbjct: 446 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKC 505

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    +  ++  L    +   A    + M + G+K N      ++  L   G++ EA G
Sbjct: 506 PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG 565

Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
                  +G +P                                D ASY  +++ L +A 
Sbjct: 566 LFSRFKANGGIP--------------------------------DSASYNAMIEGLSSAN 593

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           K ++AY++  +   KG     K+   L+  L++    +QA I+  +++
Sbjct: 594 KAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLK 641



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 203/442 (45%), Gaps = 12/442 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N++ + L  A+  E A   F  ++   +   +  T   +I+ LG+ G+++ A  +   M 
Sbjct: 198 NIMIDRLCKAQKLEEACSIFEGMDDK-VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML 256

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
             G      ++  LI S+ K G  ++  KI+  M   G    +   +     + + G   
Sbjct: 257 DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETE 316

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
             +  F ++ + G  P   +Y++++ G   +         F  MK +G  LD   YN +I
Sbjct: 317 KGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVI 376

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           +G+ +  K+++A +L  EMK K   PTV++Y ++I G   ++R D+A  +F+E KS  +K
Sbjct: 377 DGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIK 436

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
            N V Y++L+ G    G++ E   ++ E++++ + P +   +  LL    K+  +N A  
Sbjct: 437 LNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP-NVYTWNCLLDALVKAEEINEALI 495

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
             ++M  L  P     Y ILI   C+   +++A     ++  +++ L+P +       +Y
Sbjct: 496 CFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM--QKLGLKPNTI------TY 547

Query: 384 NPMIQHLCHNGQTGKAE-IFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
             MI  L   G   +A  +F R     G+ D  ++N +I G S       A+ + +    
Sbjct: 548 TTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRL 607

Query: 443 RGVPRDADAYICLIESYLRKGE 464
           +G        + L+++ L K E
Sbjct: 608 KGCNIHTKTCVVLLDA-LHKAE 628



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 225/495 (45%), Gaps = 19/495 (3%)

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P  + YN M+ G+  + K + A    E  K++G    V+ YN ++    + ++++EA ++
Sbjct: 88  PCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRI 147

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F EMK   + P V +Y  +I       + + AL I D+M+   + PN +T   ++  LC 
Sbjct: 148 FEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCK 206

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
           A K+ E   +   M ++   P  N+V F  L+    K G ++ A  + + M+       A
Sbjct: 207 AQKLEEACSIFEGMDDKVCTP--NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGA 264

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y  LI +F K    +   K+  ++V       P  TL       N  +  +   G+T 
Sbjct: 265 IVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC--SPDLTL------INTYMDCVFKAGETE 316

Query: 398 KAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           K    FR++   G + D  +++ LI G  K G  +  +E+   M  +G   D  AY  +I
Sbjct: 317 KGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVI 376

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           + + + G+   A   L+ M   GH P    + SV++ L +  R+  A  + +     G+K
Sbjct: 377 DGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIK 436

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            N+ + + +++     G ++EA   ++ +MQ G  PN   ++ LL  L +  +   A+  
Sbjct: 437 LNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALIC 496

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLN 632
                   C  +  +Y  +++ L    K   A+ + ++ M+K G+  +  +   +I+GL 
Sbjct: 497 FQSMKDLKCPPNQITYSILINGLCRVRKFNKAF-VFWQEMQKLGLKPNTITYTTMISGLA 555

Query: 633 QEGNTKQAD-ILSRM 646
           + GN  +A  + SR 
Sbjct: 556 KAGNILEASGLFSRF 570



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 121/539 (22%), Positives = 228/539 (42%), Gaps = 15/539 (2%)

Query: 3   ERAWTTRLQNKIRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           + A+    + K +  +P    +N +   L   +  E AL+ F  ++R  + N    T+  
Sbjct: 107 DEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPN--VPTYNI 164

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I++L R GKLN A  I  DM + G+  +     ++I+   K   ++E+  IF+ M    
Sbjct: 165 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 224

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +  ++ +L   + + GR   A   + KML  G  P    Y  ++  FF   + E   
Sbjct: 225 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 284

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           + +++M   G S D+   NT ++   +  + ++   LF E+      P   SY+ +I G 
Sbjct: 285 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 344

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           V    A++   +F  MK      +   Y A++ G C +GK+ +  ++L EM  +  PP  
Sbjct: 345 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 404

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +    + G+  K   L+ A  + +      I      Y  LI+ F K    D A  +++
Sbjct: 405 VTYGSVIDGLA-KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 463

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNN 419
           +L++K         L     ++N ++  L    +  +A I F Q MK     P  + ++ 
Sbjct: 464 ELMQK--------GLTPNVYTWNCLLDALVKAEEINEALICF-QSMKDLKCPPNQITYSI 514

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  +    + AF   + M + G+  +   Y  +I    + G   +A         +G
Sbjct: 515 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 574

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
             P S+ + +++E L    +   A  + +    KG   +      +L+AL     +E+A
Sbjct: 575 GIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 203/424 (47%), Gaps = 13/424 (3%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
            T +K + + G+V K  H    LL    +G Q ++  +  LI    K G  + ++K+   
Sbjct: 133 NTLIKGLCLKGQVKKALHFHDKLL---AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRK 189

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           +     + +V+ Y  +   + +      A   F++M  +GI     TY+ +++GF +  K
Sbjct: 190 IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGK 249

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           L+ AI    +M  + I+ +V TYN +++   +  K+ EA+ + A M +  ++P VI+Y+T
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           ++ GY  V     A  +F+ M    V P+  TYT L+ G C    + E   + +EM ++ 
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P   + +  L+   CKSG +    D++  M     P +   Y  LI+  CK    DRA
Sbjct: 370 MVPGIVT-YSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 428

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
           I L +K+ ++EI  RP         ++  ++  LC  G+   A+  F+ L+ KG  L+  
Sbjct: 429 IALFNKMKDQEI--RPN------IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +N +I GH K+G  + A  ++  M   G   +A  +  +I +  +K E   A+  L  M
Sbjct: 481 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540

Query: 476 IEDG 479
           I  G
Sbjct: 541 IARG 544



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/487 (23%), Positives = 222/487 (45%), Gaps = 17/487 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  +++S+ K      +V +   ++  G++  + + + L       G+         K+L
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G  P   T N ++ G  L  +++ A+ F + + ++G  L+ V+Y T+ING  +     
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A KL  ++  +  +P V  Y+T+I      +   +A  +F EM    +  + VTY+ L+
Sbjct: 182 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 241

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  GK+ E   +L EMV + I P +   +  L+   CK G +  A  VL  M++  +
Sbjct: 242 YGFCIEGKLKEAIGLLNEMVLKTINP-NVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM--EASSYNPMIQHLC 391
             +   Y  L++ +           L+ ++ + + +    S + +  +  +Y  +I   C
Sbjct: 301 KPDVITYSTLMDGY----------FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 392 HNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            N    +A   F+++ +K ++   V +++LI G  K G     ++++  M  RG P D  
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVI 410

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  LI+   + G    A    + M +    P    F  +++ L + GR++ A  V + +
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
           + KG   N+     ++     +G +EEAL  +  M  +G +PN   F++++  L +K + 
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 568 IAAVKLL 574
             A KLL
Sbjct: 531 DKAEKLL 537



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 175/356 (49%), Gaps = 9/356 (2%)

Query: 57  ETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDI 116
           E +  +I+ L +   ++ A  +  +M  KG+  D   +  LI  +  +G ++E++ + + 
Sbjct: 200 EMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNE 259

Query: 117 MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           M    +  +V +Y+ L   + + G+   AK     ML   ++P   TY+ ++ G+FL  +
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           ++ A   F  M   G++ DV TY  +ING+ + K +DEA  LF EM +KN+ P +++Y++
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G     R      + DEM+      + +TY++L+ GLC  G +     +  +M ++ 
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P +   F  LL   CK G L  A +V + ++          Y ++I   CK  + + A
Sbjct: 440 IRP-NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
           + +L K+ +   I  P       A ++  +I  L    +  KAE   RQ++ +G+L
Sbjct: 499 LTMLSKMEDNGCI--PN------AFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/510 (21%), Positives = 223/510 (43%), Gaps = 16/510 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML     P    +N +L  F       TA+     ++ +GI  D++T N +IN +  
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++     + A++ ++   P  ++  T+IKG     +   AL   D++ +   + N V+
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 166

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ G+C  G      K+LR++  R   P +  ++  ++   CK   ++ A  +   M
Sbjct: 167 YATLINGVCKIGDTRGAIKLLRKIDGRLTKP-NVEMYSTIIDALCKYQLVSEAYGLFSEM 225

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               I  +   Y  LI  FC       AI LL+++V K        T++    +YN ++ 
Sbjct: 226 TVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK--------TINPNVYTYNILVD 277

Query: 389 HLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G+  +A+     ++K  V  D + ++ L+ G+        A  +   M   GV  
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           D   Y  LI  + +     +A      M +    P    + S+++ L + GR+     ++
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
             M ++G   ++   + +++ L   GH++ A+   + M      PN   F  LL  L + 
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G+   A ++    L +   +++ +Y  +++     G    A ++L K+ + G + +  + 
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517

Query: 625 DKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
           + +I  L ++    +A+   +++R  ++RG
Sbjct: 518 ETIIIALFKKDENDKAE---KLLRQMIARG 544



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/469 (21%), Positives = 193/469 (41%), Gaps = 29/469 (6%)

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
           + +D+A   F  M      P +I +  ++  +  ++    A+ +   ++   ++P+ +T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
             L+   C  G++     VL ++++R  PP D      L+   C  G +  A      ++
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPP-DTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
                     Y  LI   CK      AIKLL K+  +  + +P   +      Y+ +I  
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR--LTKPNVEM------YSTIIDA 208

Query: 390 LCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
           LC      +A   F ++  KG+  D V ++ LI G   EG    A  ++  M  + +  +
Sbjct: 209 LCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPN 268

Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
              Y  L+++  ++G+  +AK+ L  M++    P    + ++M+  F    V+ A  V  
Sbjct: 269 VYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFN 328

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKG 565
           +M   GV  ++     ++        V+EAL     M Q   VP    + SL+  L + G
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +      L+D    R    D+ +Y  ++D L   G    A ++  K+ ++    +  +  
Sbjct: 389 RIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFT 448

Query: 626 KLIAGLNQEGNTKQA-----DILSR-----------MIRGEMSRGSQKE 658
            L+ GL + G  K A     D+L++           MI G   +G  +E
Sbjct: 449 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/489 (23%), Positives = 227/489 (46%), Gaps = 18/489 (3%)

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G+     +++ L     + G   ++   F K+L +G +P   T+N ++ G  L   +  A
Sbjct: 100 GIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQA 159

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
           + F + + ++G  LD V+Y T+ING  +  ++  A +L   +  K ++P  + Y  +I  
Sbjct: 160 LNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDN 219

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
               +  +DA  ++ +M +  + P+  T  +L+ G C  G++ E   +L +M+   I P+
Sbjct: 220 MCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPR 279

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
             + F  L+   CK G +  A  +L   ++  I  +   Y  L++ +C  +  ++A  + 
Sbjct: 280 MYT-FSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIF 338

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL-MKKGVLDPVAFNN 419
           D +  + +I   Q        SY  MI  LC      +A   F ++  +K + + V +N+
Sbjct: 339 DSMASRGVIANVQ--------SYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNS 390

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  K G      ++V  M  RG P +   Y  ++++  +      A   L ++ + G
Sbjct: 391 LIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQG 450

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
             P    +  +++ L + G+++ A +V + ++ KG   ++     +++   ++G  + AL
Sbjct: 451 IRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAAL 510

Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCI-----IDLASYEK 591
             +  M  +G +PN   ++ ++  L EK +   A KLL   + R  +     I LAS E 
Sbjct: 511 ALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKSYIYLASKET 570

Query: 592 VLDALLAAG 600
            +  + AAG
Sbjct: 571 GVMGMGAAG 579



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 212/447 (47%), Gaps = 52/447 (11%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
             AL F   V   G F+ D+ ++  +I  L +VG++  A  +L  +  K VQ +  M+ +
Sbjct: 157 HQALNFHDKVVAQG-FHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 215

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVK---SYDALFKLILRRGRYMMAKRYFNKML 153
           +I++  K  +V ++   FD+  Q+  +R      + ++L       G+   A    +KM+
Sbjct: 216 IIDNMCKAKLVNDA---FDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMI 272

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
            E I P  +T+++++  F    K++ A         + I LDVVTYN++++GY   K+++
Sbjct: 273 LENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEIN 332

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           +A+ +F  M  + +   V SYTTMI G   ++  D+A+ +F+EM+   + PN VTY +L+
Sbjct: 333 KAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLI 392

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            GL   GK+  V K++ EM +R  PP                                +I
Sbjct: 393 DGLGKLGKISCVLKLVDEMHDRGQPP--------------------------------NI 420

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
            T    Y  +++  CK    D+AI LL  L ++ I  RP      +  +Y  +I+ LC +
Sbjct: 421 IT----YNSILDALCKNHHVDKAIALLTNLKDQGI--RP------DMYTYTVLIKGLCQS 468

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+   A+  F  L+ KG  LD   +  +I+G   +G  D+A  ++  M   G   +A  Y
Sbjct: 469 GKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTY 528

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDG 479
             +I S   K E   A+  L  MI  G
Sbjct: 529 EIVILSLFEKDENDMAEKLLREMIARG 555



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/524 (21%), Positives = 232/524 (44%), Gaps = 40/524 (7%)

Query: 26  VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETH--LKMIEILGRVGKLNH---ARCILL 80
           +Y+ LH  ++ E+ L          L +H   T   ++  +IL  + K  H   A  +  
Sbjct: 39  LYSQLHHHQDEENNL----ISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQ 94

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G+  D   F +LI  + + G+   S  +F  + + G + +  +++ L K +  +G
Sbjct: 95  QMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKG 154

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A  + +K++++G    + +Y  ++ G     ++  A++  + +  + +  + V YN
Sbjct: 155 HIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN 214

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+   + K +++A  L+++M  K I P   +  ++I G+  + +  +A+ +  +M   
Sbjct: 215 MIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILE 274

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
           ++ P   T++ L+   C  GK+ E + +L   +++ I   D   +  L+   C    +N 
Sbjct: 275 NINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDI-ILDVVTYNSLMDGYCLVKEINK 333

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII---LRPQSTLD 377
           A D+  +M    +      Y  +I   CK +M D A+ L +++  ++II   +   S +D
Sbjct: 334 AKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLID 393

Query: 378 ------------------------MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-L 412
                                       +YN ++  LC N    KA      L  +G+  
Sbjct: 394 GLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRP 453

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D   +  LI+G  + G  + A ++ + +  +G   D   Y  +I+ +  KG   DA  AL
Sbjct: 454 DMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGL-FDAALAL 512

Query: 473 DSMIED-GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            S +ED G  P +  +  V+ SLFE      A ++++ M+ +G+
Sbjct: 513 LSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 104/452 (23%), Positives = 188/452 (41%), Gaps = 54/452 (11%)

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           ++ +N +++   + K    A  L  +M+   I     ++  +I  +  +     +  +F 
Sbjct: 70  IIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFG 129

Query: 256 EM--KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           ++  K FD  PNA+T+  L+ GLC  G + +      ++V +     D   +  L+   C
Sbjct: 130 KILKKGFD--PNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFH-LDQVSYGTLINGLC 186

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
           K G + AA  +LK +    +   A  Y ++I+N CKA++ + A  L  ++V K I   P 
Sbjct: 187 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRI--SP- 243

Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPD 431
                +  + N +I   C  GQ  +A     +++ + + +P    F+ L+    KEG   
Sbjct: 244 -----DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENI-NPRMYTFSILVDAFCKEGKVK 297

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A  ++ +  ++ +  D   Y  L++ Y    E   AK   DSM                
Sbjct: 298 EAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSM---------------- 341

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
                      ASR        GV  N+     ++  L     V+EA+   + M     +
Sbjct: 342 -----------ASR--------GVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKII 382

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           PN   ++SL+  L + GK    +KL+D    R    ++ +Y  +LDAL        A ++
Sbjct: 383 PNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIAL 442

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           L  + ++G   D  +   LI GL Q G  + A
Sbjct: 443 LTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDA 474


>gi|359476071|ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 220/509 (43%), Gaps = 13/509 (2%)

Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
           G + +S+ +F+ M +L    +  + + L  ++ + G    A   F  +L +G     H+Y
Sbjct: 59  GSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSY 118

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N +LW      +  TA+     +K  G   +  +Y  ++ G+++    +EA  +  EMK 
Sbjct: 119 NPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKI 178

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
              +P VI+YT ++K      R  DAL I  +M      P+ VTY  +L  L    + VE
Sbjct: 179 DGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVE 238

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
           + ++L+ + ++ I P D+  +  L G   K   +  A  +L  +I      +   Y I  
Sbjct: 239 IGELLQVIDQKEISP-DSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYF 297

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
              C+      A+ LL  +VEK ++  P +       SYN ++   C      +A   F 
Sbjct: 298 HCLCRENKSGEALSLLQSMVEKGLV--PTNV------SYNTILNGFCRENHIDEALQLFD 349

Query: 405 QL-MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
                    D V+FN ++    K+GN      ++  M   GV  +  +  CLI+ +   G
Sbjct: 350 HFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIG 409

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           + ++    L+SMI +G +P    F  +++ L ++G + TA R+ +     G   N     
Sbjct: 410 KISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYN 469

Query: 524 KILEALLMRGH---VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGR 580
            ++ A +  G+   VE+ L  +           + S +  L ++GK   A++L D  L  
Sbjct: 470 ILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLES 529

Query: 581 DCIIDLASYEKVLDALLAAGKTLNAYSIL 609
                +  Y  +L A+   GK  +  S+L
Sbjct: 530 GLTPTITIYNTILAAMFQRGKFWDIVSLL 558



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 124/554 (22%), Positives = 234/554 (42%), Gaps = 16/554 (2%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           NL+ ++L  A  +  A   FR +   G       ++  ++  L + G+   A  +L  + 
Sbjct: 84  NLLISMLSKAGMAREAHFVFRVLLGKGCLKC-AHSYNPILWALCKCGQSYTALALLYSLK 142

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           K G   +   +  L+  + K+G+ +E+  + D MK  G + +V +Y  + K +   GR  
Sbjct: 143 KMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIG 202

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A     KM  EG +P   TYNV+L   F   +        + +  + IS D  TY  + 
Sbjct: 203 DALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALT 262

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            G  +  ++  A KL   +        V  Y           ++ +AL +   M    + 
Sbjct: 263 GGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLV 322

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P  V+Y  +L G C    + E  + L +  E      D   F  +L   CK G+ +    
Sbjct: 323 PTNVSYNTILNGFCRENHIDEALQ-LFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRR 381

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           VL  M    +         LI+ FC        ++LL+ ++        ++ L+    ++
Sbjct: 382 VLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMI--------RNGLNPTVVTF 433

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N ++  LC NG  G A   FR+    G   +  ++N LI    +EGN     ++++ M  
Sbjct: 434 NMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYS 493

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
             +  DA  Y   I+   ++G+ + A    D M+E G +P  +++ +++ ++F+ G+   
Sbjct: 494 WRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFWD 553

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
              ++K M   G + N  +  +IL+  + +  ++     I+L +   S P+    +++ S
Sbjct: 554 IVSLLKDMTMDGCEPN-AVSIEILKQAMSKCWMKRFPEFIELWVVHLSGPD----ITIWS 608

Query: 563 EKGKTIAAVKLLDF 576
           E    +A V L+ F
Sbjct: 609 ELQTMVAEVTLVVF 622



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 150/386 (38%), Gaps = 44/386 (11%)

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           MK     PNA T+  LL G+   G +        EM      P   S+ +K+L      G
Sbjct: 1   MKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSL-LKILKKWLGLG 59

Query: 317 HLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
            L  +  V + M+RL   PTE     +LI    KA M   A  +   L+ K  +      
Sbjct: 60  SLVDSMSVFEFMLRLEYFPTEP-TLNLLISMLSKAGMAREAHFVFRVLLGKGCL------ 112

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAF 434
               A SYNP++  LC  GQ+  A      L K G V +  ++  L+ G SKEG  + AF
Sbjct: 113 --KCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAF 170

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            ++  M   G   +   Y  +++    +G   DA   L  M ++G  P    +  ++  L
Sbjct: 171 CMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILREL 230

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF 554
           F   R      +++ + +K +  +    A +   LL R  V                   
Sbjct: 231 FHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRDQVR------------------ 272

Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
                          A KLL + +   C +D+A Y      L    K+  A S+L  ++E
Sbjct: 273 --------------VANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVE 318

Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQA 640
           KG V    S + ++ G  +E +  +A
Sbjct: 319 KGLVPTNVSYNTILNGFCRENHIDEA 344


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 185/414 (44%), Gaps = 26/414 (6%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ +  K       + +F  M+  G+   + +Y+ +   + R  R+++A     KM+
Sbjct: 72  FSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMM 131

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G EP   T + ++ GF    ++  A+     M+     LDVV YNT+I+G+ +   ++
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVN 191

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A  LF  M+   +    ++Y +++ G     R  DA R+  +M   D+ PN +T+TAL+
Sbjct: 192 NALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALI 251

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
                 GK +E +K   EM+ R I P D   +  ++   C  G ++ A  +L  M+    
Sbjct: 252 NAFVREGKFLEAKKFYEEMIRRCIDP-DVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGC 310

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL----------------RPQSTLD 377
             +   Y  LI  FCK +  D   KL+ ++ ++ +++                RP +  +
Sbjct: 311 FPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQE 370

Query: 378 M--------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
           +           +Y+ ++  LC+N +  KA + F  + K  + LD   +N +I G    G
Sbjct: 371 IFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIG 430

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           N + A+++   +  +G+  D   Y  +I  + RK     A      M EDG  P
Sbjct: 431 NVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 160/308 (51%), Gaps = 4/308 (1%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   + G +N+A  +   M + GV+ D   +  L+      G   ++ ++   M    
Sbjct: 180 IIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRD 239

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +  +V ++ AL    +R G+++ AK+++ +M+   I+P   TYN M+ G  +  +++ A 
Sbjct: 240 IVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAK 299

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           +  + M ++G   DVVTYNT+ING+ + K++DE  KL  EM ++ +    +++ T+I+GY
Sbjct: 300 QILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGY 359

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               R D A  IF  M S   +PN  TY+ LL GLC   + VE   VL E +++     D
Sbjct: 360 FQAGRPDAAQEIFSRMGS---RPNIRTYSILLYGLCYNWR-VEKALVLFESMQKSEMELD 415

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            + +  ++   C  G++  A D+  ++    +  +   Y  +I  FC+  ++D+A  L  
Sbjct: 416 ITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYR 475

Query: 362 KLVEKEII 369
           K+ E  ++
Sbjct: 476 KMQEDGLL 483



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 188/414 (45%), Gaps = 13/414 (3%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + E++ +F  M Q     S+  +  L   I +   Y +    F+ M   GI    +TYN+
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           ++       +   A+     M   G   DVVT +++ING+ +  ++  A  L ++M+E  
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
            +  V+ Y T+I G+      ++AL +F  M+   V+ + VTY +L+ GLC +G+  +  
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           +++R+MV R I P +   F  L+    + G    A    + MIR  I  +   Y  +I  
Sbjct: 230 RLMRDMVMRDIVP-NVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHG 288

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            C     D A ++LD +V K     P      +  +YN +I   C   +  +     R++
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCF--P------DVVTYNTLINGFCKTKRVDEGTKLVREM 340

Query: 407 MKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            ++G V+D V FN +I+G+ + G PD+A EI   MG R   R    Y  L+         
Sbjct: 341 SQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIR---TYSILLYGLCYNWRV 397

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
             A    +SM +       + +  V+  +   G V+ A  +  S+  KG++ ++
Sbjct: 398 EKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDV 451



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 186/403 (46%), Gaps = 16/403 (3%)

Query: 33  AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
           +KN +  +  F  +E  G+  HD  T+  +I  L R  +   A  ++  M K G + D  
Sbjct: 82  SKNYDLVISLFHNMEICGI-GHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
               LI  + +   V  +V +   M+++  +  V  Y+ +     + G    A   F +M
Sbjct: 141 TVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRM 200

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
             +G+     TYN ++ G   S +   A R   DM  R I  +V+T+  +IN + R  K 
Sbjct: 201 ERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKF 260

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            EA+K + EM  + I+P V +Y +MI G     + D+A +I D M +    P+ VTY  L
Sbjct: 261 LEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTL 320

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM-IRL 331
           + G C   ++ E  K++REM +R +   D   F  ++    ++G  +AA ++   M  R 
Sbjct: 321 INGFCKTKRVDEGTKLVREMSQRGLVV-DTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRP 379

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
           +I T    Y IL+   C     ++A+ L + + + E        ++++ ++YN +I  +C
Sbjct: 380 NIRT----YSILLYGLCYNWRVEKALVLFESMQKSE--------MELDITTYNIVIHGMC 427

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
             G    A   F  L  KG+  D V +  +I G  ++   D A
Sbjct: 428 MIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKA 470



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/439 (20%), Positives = 186/439 (42%), Gaps = 16/439 (3%)

Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
            +DEA  LF  M +    P+++ ++ ++      +  D  + +F  M+   +  +  TY 
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
            ++  LC   + V    V+ +M++    P D      L+   C+   +  A D++  M  
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEP-DVVTVSSLINGFCQGNRVFGAVDLVSKMEE 167

Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
           +    +   Y  +I+ FCK  + + A+ L  ++         +  +  +  +YN ++  L
Sbjct: 168 MRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRM--------ERDGVRADTVTYNSLVTGL 219

Query: 391 CHNGQTGKAEIFFRQL-MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
           C +G+   A    R + M+  V + + F  LI    +EG    A +  + M RR +  D 
Sbjct: 220 CCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDV 279

Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
             Y  +I      G+  +AK  LD M+  G  P    + +++    +  RV   +++++ 
Sbjct: 280 FTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVRE 339

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
           M ++G+  +      I++     G  + A    ++  + GS PN   +  LL  L    +
Sbjct: 340 MSQRGLVVDTVTFNTIIQGYFQAGRPDAAQ---EIFSRMGSRPNIRTYSILLYGLCYNWR 396

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
              A+ L +     +  +D+ +Y  V+  +   G   +A+ +   +  KG   D  +   
Sbjct: 397 VEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTT 456

Query: 627 LIAGLNQEGNTKQADILSR 645
           +I+G  ++    +AD L R
Sbjct: 457 MISGFCRKRLWDKADFLYR 475


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 213/486 (43%), Gaps = 50/486 (10%)

Query: 15  RALVP---QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           R LVP    F++ L+  +L  +   E A + F   E  G    D  +   MI+    VG 
Sbjct: 124 RGLVPGSNTFNNLLI--LLIKSNFFEKAWRVFN--ETKGNVKLDVYSFGIMIKGCCEVGY 179

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           L+    +L  M + G+  +  ++  LI+   K G ++   ++F  M +L V  +  +Y  
Sbjct: 180 LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTV 239

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L     + G        + KM   GI P  +TYN M+       KL  A   F++M+ RG
Sbjct: 240 LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 299

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           ++ +VVTYNT+I G  + +++ EAE+L   MK   + P +ISY T+I GY ++   D A 
Sbjct: 300 VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKAS 359

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            +F++MKS    P+  TY  L+ G  +A     V  ++REM  R + P     +  L+  
Sbjct: 360 SLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSP-SKVTYTILMDA 418

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
             +S ++  A  +  +M +  +  +   YG+LI   C       A KL   L   E+ L+
Sbjct: 419 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL--DEMHLK 476

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           P   +      YN MI   C  G + +                                 
Sbjct: 477 PNDVI------YNTMIYGYCKEGSSYR--------------------------------- 497

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A  ++K MG  G+  +  +Y   I+   +  +  +A+  L  MIE G  P+ S++  + 
Sbjct: 498 -ALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMIS 556

Query: 492 ESLFED 497
           ++ F++
Sbjct: 557 KARFDN 562



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/537 (20%), Positives = 234/537 (43%), Gaps = 43/537 (8%)

Query: 28  NVLHGAKNSEHALQF-FRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG 86
           + L G +++  ++ F    +  + LF+H +   LK+I      G+++ +      +  + 
Sbjct: 29  SALQGFQHTHQSISFILHLLISSNLFSHSQSLLLKLIS-----GQISSSSFTPSSLFHEL 83

Query: 87  VQWDEDMF-------EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            Q   D F       E +I ++ +  + ++++  F+ M   G+     +++ L  L+++ 
Sbjct: 84  TQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKS 143

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
             +  A R FN+     ++   +++ +M+ G      L+        M+  G+S +VV Y
Sbjct: 144 NFFEKAWRVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVY 202

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            T+I+G  +   ++  ++LF +M E ++     +YT +I G+  +    D + ++++MK 
Sbjct: 203 TTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKL 262

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + PN  TY +++   C+ GK+    ++  EM ER +   +   +  L+G  C+   + 
Sbjct: 263 TGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC-NVVTYNTLIGGLCQERRVL 321

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK---------LVEKEIIL 370
            A  ++  M R  +      Y  LI+ +C     D+A  L ++         L    I++
Sbjct: 322 EAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILI 381

Query: 371 RPQS-----------TLDMEASSYNP-------MIQHLCHNGQTGKAEIFFRQLMKKG-V 411
              S             +MEA   +P       ++  L  +    KA   +  + K G V
Sbjct: 382 AGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLV 441

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D   +  LI G    G+   A ++ K +    +  +   Y  +I  Y ++G    A   
Sbjct: 442 ADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRL 501

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           L  M E+G  P  + + S ++ L +D +   A  ++K M+E G+K ++ +   I +A
Sbjct: 502 LKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 558



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/333 (19%), Positives = 142/333 (42%), Gaps = 18/333 (5%)

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
           S PT    +  +I    ++++ ++A+   ++++ + ++  P S      +++N ++  L 
Sbjct: 90  SFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLV--PGS------NTFNNLLILLI 141

Query: 392 HNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            +    KA   F +      LD  +F  +I+G  + G  D  FE++  M   G+  +   
Sbjct: 142 KSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVV 201

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+   + G+    K     M E         +  ++   F+ G  +    + + M 
Sbjct: 202 YTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMK 261

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTI 568
             G+  N+     ++      G +  A    D M + G   +V  +++L+  L ++ + +
Sbjct: 262 LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVL 321

Query: 569 AAVKLLDFC-LGRDCII-DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
            A +L+  C + RD +  +L SY  ++D   + G    A S+  ++   G      + + 
Sbjct: 322 EAERLM--CRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 379

Query: 627 LIAGLNQEGNTKQADILSRMIRGEMSRGSQKEK 659
           LIAG ++  N+     ++ M+R   +RG    K
Sbjct: 380 LIAGFSEAKNSAG---VTDMVREMEARGLSPSK 409


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 218/457 (47%), Gaps = 14/457 (3%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           + +++  Y     ++ ++K+   M   G+E +  +Y ++  L+   G+   A R    M+
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G+      +  ++ GF     L  A  +F++M+ RG++ D VTY  +ING  R  ++ 
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EAE++  EM++K ++   ++YT +I GY  V +  +A  + ++M    V PN VTYTAL 
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM--KLLGVQCKSGHLNAAADVLKAMIRL 331
            GLC  G +    ++L EM  + +   + ++F    L+   CK+G+L  A   +  M   
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGL---ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524

Query: 332 SIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC 391
            +  +   Y  +I   C+++  DRA  LL ++++K I  +P         +YN ++   C
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI--KPTIV------TYNVLMNGFC 576

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
            +G+    +     +++K +  +   +N+L++ +  E N  S  EI K M  + V  + +
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  LI+ + +     +A      MIE G    +S + +++  L +  +   A R+ + M
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            +  +    D+    ++      ++E  L   D +++
Sbjct: 697 RKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 163/334 (48%), Gaps = 2/334 (0%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A  +F  +++ GL   D  T+  +I  L R G+L  A  +L +M  KG+  D   + VLI
Sbjct: 374 ARNWFDEMQKRGL-AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + Y K G + E+  + + M Q  V  +V +Y AL   + ++G    A    ++M S+G+E
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
               TYN ++ G   +  LE A+R   DM   G+  DV TY T+I    + K++D A  L
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
             EM +K I+PT+++Y  ++ G+    R +   R+ + M   ++ PN  TY +L+   C 
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
              M    ++ + M+ + + P +N+  + + G  CK+ ++  A      MI       A 
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKG-HCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
            Y  LI    K + +  A +L +K+ +  +   P
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEP 705



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 197/439 (44%), Gaps = 23/439 (5%)

Query: 117 MKQLGVERSVKSYDA-LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSL 175
           ++Q G+  S +S +A L +L L             ++  E  E    +YN++L     + 
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAV---------QLFQELPEKNTCSYNILLKALCTAG 267

Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
           +++ A + F++M S     DVVTY  M++GY    +++ A KL +EM  + +E   ++YT
Sbjct: 268 RIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324

Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           ++I       +  DA+R+ ++M    V  +A  +T ++ G C  G +   +    EM +R
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384

Query: 296 YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
            +   D   +  L+   C++G L  A  VL+ M    +  +A  Y +LI+ +CK      
Sbjct: 385 GLA-ADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDP 414
           A  + +K+V+K +             +Y  +   LC  G    A     ++  KG+ L+ 
Sbjct: 444 AFLVHNKMVQKRVT--------PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
             +N+LI G  K GN + A   +  M   G+  D   Y  +I +  +  E   A + L  
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M++ G  P    +  +M      GRV+   R+++ M+EK +  N      +++   +  +
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 535 VEEALGRIDLMMQSGSVPN 553
           ++        M+    VPN
Sbjct: 616 MKSTTEIYKGMLSQEVVPN 634



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 222/473 (46%), Gaps = 20/473 (4%)

Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
           + E+V++F  +     E++  SY+ L K +   GR   A + F++M S    P   TY +
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
           M+ G+    +LETAI+   +M +RG+ L+ V Y ++I       ++ +A ++  +M    
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           +      +TT++ G+        A   FDEM+   +  + VTYTAL+ GLC AG++ E +
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           +VL+EM ++ +   D   +  L+   CK G +  A  V   M++  +      Y  L + 
Sbjct: 411 RVLQEMEDKGLD-VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK      A +LL ++  K         L++   +YN +I  LC  G   +A      +
Sbjct: 470 LCKQGDVCAANELLHEMCSK--------GLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
            + G+  D   +  +I    +    D A  +++ M  +G+      Y  L+  +   G  
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
              K  L+ M+E    P ++ + S+M+    +  +++ + + K M+ + V  N +    +
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 526 LEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLD 575
           ++      +++EAL     M++ G   +  ++++L+ +L++K K   A +L +
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFE 694



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 102/455 (22%), Positives = 199/455 (43%), Gaps = 45/455 (9%)

Query: 59  HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
           +  +I +L   G+++ A  ++ DM   GV  D  +F  ++  + +KG +  +   FD M+
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382

Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
           + G+     +Y AL   + R G    A+R   +M  +G++    TY V++ G+    K+ 
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
            A      M  + ++ +VVTY  + +G  +   +  A +L  EM  K +E  + +Y ++I
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLI 502

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
            G       + A+R   +M    +KP+  TYT ++  LC + ++     +L+EM+++ I 
Sbjct: 503 NGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIK 562

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P                                +I T    Y +L+  FC +   +   +
Sbjct: 563 P--------------------------------TIVT----YNVLMNGFCMSGRVEGGKR 586

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLC-HNGQTGKAEIFFRQLMKKGVLDPVAF 417
           LL+ ++EK I   P +T      +YN +++  C         EI+   L ++ V +   +
Sbjct: 587 LLEWMLEKNI--HPNTT------TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTY 638

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N LI+GH K  N   A      M  +G    A +Y  LI    +K +  +A+   + M +
Sbjct: 639 NILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
           D  +    ++   ++  F +  +++   +   +VE
Sbjct: 699 DRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 3/216 (1%)

Query: 21  FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           F +N + N L  A N E A++    ++ AGL   D  T+  +I  L +  +L+ A  +L 
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGL-KPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M  KG++     + VL+  +   G V+   ++ + M +  +  +  +Y++L K      
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                   +  MLS+ + P  +TYN+++ G   +  ++ A+ F  +M  +G  L   +YN
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNI--EPTVISY 234
            +I   N+ KK  EA +LF +M++  +  EP V ++
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNF 710



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 15/308 (4%)

Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
           Y IL++  C A     A +L D++     ++           +Y  M+   C   +   A
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMASPPDVV-----------TYGIMVHGYCTLSELETA 304

Query: 400 EIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
                ++  +G+ L+PVA+ ++I     EG    A  +V+ M   GV  DA  +  ++  
Sbjct: 305 IKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSG 364

Query: 459 YLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
           + RKG+ A A+   D M + G +     + +++  L   G ++ A RV++ M +KG+  +
Sbjct: 365 FCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVD 424

Query: 519 LDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
                 +++     G + EA    + M+Q    PN   + +L   L ++G   AA +LL 
Sbjct: 425 AVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLH 484

Query: 576 FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
               +   +++ +Y  +++ L  AG    A   +  + E G   D  +   +I  L Q  
Sbjct: 485 EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 636 NTKQADIL 643
              +A  L
Sbjct: 545 ELDRAHSL 552


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 212/471 (45%), Gaps = 50/471 (10%)

Query: 107 VQESVKIFDIMKQLG-VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
           V+  V+ F  M + G V+  V+S   +  ++ RRG    AK   N+M + G+ PT  TYN
Sbjct: 162 VELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYN 221

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
            +L    +    E        M+  G+   +VTY  +I  Y   +++ EAEK++ EM E+
Sbjct: 222 TLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCER 281

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
           N+E  V  YT+MI           A  +FDEM    + PN  T+ AL+ G+C AG+M   
Sbjct: 282 NVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAA 341

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
           + +L EM  + +   +  +F  ++   CK G ++ A  +   M R     +   Y IL  
Sbjct: 342 EILLEEMQCKGV-DLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILAS 400

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
             CK   Y+ A ++L+ +VEK +   P         +    I+  C  G   + E F R 
Sbjct: 401 GLCKLHRYEEAKRVLNVMVEKGVA--PN------VVTCATFIEIYCQEGNLAEPERFLRN 452

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           + K+GV+ + V +N LI  +SK        E VK                  +++  K E
Sbjct: 453 IEKRGVVPNIVTYNTLIDAYSKN-------EKVK------------------QAHXLKAE 487

Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
                     M+E G  P    + S++       +V  A ++   M+ KG++ N+     
Sbjct: 488 ----------MVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTA 537

Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
           I+  L   G  +EAL   D MM+ G +P+   F++L+  L  K  + AA+K
Sbjct: 538 IISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSL-HKPSSHAALK 587



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 180/410 (43%), Gaps = 45/410 (10%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           IL  M ++GV      + +LIE Y     + E+ K+++ M +  VE  V  Y ++     
Sbjct: 239 ILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNC 298

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
           R G    A   F++M+  GI P   T+  ++ G   + ++E A    E+M+ +G+ L+VV
Sbjct: 299 RAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVV 358

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            +NTM++GY +   MDEA +L   M+ K  E  V +Y  +  G   + R ++A R+ + M
Sbjct: 359 IFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVM 418

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
               V PN VT    +   C  G + E ++ LR + +R + P                  
Sbjct: 419 VEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVP------------------ 460

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
                         +I T    Y  LI+ + K E   +A  L  ++VEK ++  P     
Sbjct: 461 --------------NIVT----YNTLIDAYSKNEKVKQAHXLKAEMVEKGLL--P----- 495

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
            +  +Y  +I   C   +  +A   F +++ KG+   V  +  +I G SKEG  D A ++
Sbjct: 496 -DVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKL 554

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
              M R G+  D   +  L+ S  +    A  K      ++   S  SSL
Sbjct: 555 YDEMMRMGLIPDDRVFEALVGSLHKPSSHAALKQNEYGELKINTSDTSSL 604



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 206/465 (44%), Gaps = 53/465 (11%)

Query: 176 KLETAIRFFEDMKSRG-ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           K+E  +RFF  M   G + + V +   +++   R  ++  A++L  EM  + + PTV +Y
Sbjct: 161 KVELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTY 220

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T++   V  +  +    I   M+   V  + VTYT L+     + ++ E +KV  EM E
Sbjct: 221 NTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCE 280

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           R +   D  V+  ++   C++G++                                    
Sbjct: 281 RNVE-MDVYVYTSMISWNCRAGNVR----------------------------------- 304

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
           RA  L D+++ + I+  P +       ++  +I  +C  GQ   AEI   ++  KGV L+
Sbjct: 305 RASALFDEMICRGIV--PNT------XTFGALISGVCKAGQMEAAEILLEEMQCKGVDLN 356

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            V FN ++ G+ K G  D AF +  IM R+G   D   Y  L     +     +AK  L+
Sbjct: 357 VVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLN 416

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
            M+E G +P      + +E   ++G +    R ++++ ++GV  N+     +++A     
Sbjct: 417 VMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNE 476

Query: 534 HVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA-----AVKLLDFCLGRDCIIDLAS 588
            V++A      M++ G +P+  +  S++   G+ I      A+KL +  L +    ++ +
Sbjct: 477 KVKQAHXLKAEMVEKGLLPDVFTYTSLI--HGECIVDKVDEALKLFNEMLVKGIRGNVKT 534

Query: 589 YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
           Y  ++  L   G+   A  +  ++M  G + D +  + L+  L++
Sbjct: 535 YTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHK 579



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 160/356 (44%), Gaps = 3/356 (0%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           R +VP  F +N + N     K+ E   +    +ER G+      T+  +IE      ++ 
Sbjct: 211 RGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVV-ASLVTYTILIEWYASSERIG 269

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
            A  +  +M ++ V+ D  ++  +I    + G V+ +  +FD M   G+  +  ++ AL 
Sbjct: 270 EAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALI 329

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G+   A+    +M  +G++     +N M+ G+     ++ A R  + M+ +G  
Sbjct: 330 SGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFE 389

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DV TYN + +G  +  + +EA+++   M EK + P V++  T I+ Y       +  R 
Sbjct: 390 ADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERF 449

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
              ++   V PN VTY  L+       K+ +   +  EMVE+ + P D   +  L+  +C
Sbjct: 450 LRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLP-DVFTYTSLIHGEC 508

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
               ++ A  +   M+   I      Y  +I    K    D A+KL D+++   +I
Sbjct: 509 IVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLI 564



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/330 (20%), Positives = 134/330 (40%), Gaps = 30/330 (9%)

Query: 352 MYDRAIKLLDKLVEKEIILRPQST-----------------------LDMEASSYNPMIQ 388
           M+  A+K+ D ++EK +++  +S                        +D+   S   ++ 
Sbjct: 131 MFRDALKVFDYVMEKGLVVEGRSCFXKKCNKVELCVRFFRRMVESGRVDIGVQSLTIVVD 190

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC  G+ G+A+    ++  +GV+  V  +N L+       + +   EI+ +M R GV  
Sbjct: 191 VLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVA 250

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
               Y  LIE Y       +A+   + M E        ++ S++      G V+ AS + 
Sbjct: 251 SLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALF 310

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEK 564
             M+ +G+  N      ++  +   G +E A   ++ M   G   +V  F++++    ++
Sbjct: 311 DEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKR 370

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
           G    A +L D    +    D+ +Y  +   L    +   A  +L  ++EKG   +  + 
Sbjct: 371 GMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTC 430

Query: 625 DKLIAGLNQEGNTKQADILSRMIRGEMSRG 654
              I    QEGN  + +   R +R    RG
Sbjct: 431 ATFIEIYCQEGNLAEPE---RFLRNIEKRG 457



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 95/193 (49%), Gaps = 1/193 (0%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           + A +    +ER G F  D  T+  +   L ++ +   A+ +L  M +KGV  +      
Sbjct: 374 DEAFRLQDIMERKG-FEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCAT 432

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
            IE Y ++G + E  +    +++ GV  ++ +Y+ L     +  +   A     +M+ +G
Sbjct: 433 FIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKG 492

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           + P   TY  ++ G  +  K++ A++ F +M  +GI  +V TY  +I+G ++  + DEA 
Sbjct: 493 LLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEAL 552

Query: 217 KLFAEMKEKNIEP 229
           KL+ EM    + P
Sbjct: 553 KLYDEMMRMGLIP 565



 Score = 42.0 bits (97), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 69/151 (45%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T    IEI  + G L      L ++ K+GV  +   +  LI++Y K   V+++  +   M
Sbjct: 429 TCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEM 488

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G+   V +Y +L        +   A + FN+ML +GI     TY  ++ G     + 
Sbjct: 489 VEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRA 548

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           + A++ +++M   G+  D   +  ++   ++
Sbjct: 549 DEALKLYDEMMRMGLIPDDRVFEALVGSLHK 579



 Score = 40.8 bits (94), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 41  QFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES 100
           +F R +E+ G+   +  T+  +I+   +  K+  A  +  +M +KG+  D   +  LI  
Sbjct: 448 RFLRNIEKRGVV-PNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHG 506

Query: 101 YGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPT 160
                 V E++K+F+ M   G+  +VK+Y A+   + + GR   A + +++M+  G+ P 
Sbjct: 507 ECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPD 566

Query: 161 RHTYNVML 168
              +  ++
Sbjct: 567 DRVFEALV 574


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 131/588 (22%), Positives = 252/588 (42%), Gaps = 34/588 (5%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK-LNHARCILLDMPKKGVQWDEDMFE 95
           + AL FF  ++ AG       T+  +I++ G+ G+   +   +  +M  +G+Q DE  + 
Sbjct: 134 KEALGFFEQMKEAGP-QPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYN 192

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
             I +     + +E+ ++F  MK         +Y+AL  +  + G Y  A     +M S 
Sbjct: 193 TAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESA 252

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G  P   TYN +L  F  +     A    + M S+GI  DV TY ++++ Y+R  K+++A
Sbjct: 253 GCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQA 312

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            +++ +M+  N  P   ++  +I  +   +   + + IF++M++  V+P+ VT+ +LL  
Sbjct: 313 MEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGA 372

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
               G   EV KV R M +    P D + F  L+    + G  + A  +   M++     
Sbjct: 373 FGKNGMYSEVLKVFRGMKKAGFEP-DKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTP 431

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI-------------------ILRPQSTL 376
           +   +  L+    +   ++ A  +LD+L                        + + +  +
Sbjct: 432 DLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMV 491

Query: 377 DMEASSYNPMIQHLCHN--------GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKE 427
           D   + Y P  + L               +AE  F  +   G L D   FN +I  + K+
Sbjct: 492 DTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKK 551

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
           G  D A +   ++   G+  D   Y CL+  Y R+G     +  L   +  G +P    +
Sbjct: 552 GMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSY 611

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            +V+ S  + G++ +A+R+   MV  G++ +       +   +  G   EAL  +  M +
Sbjct: 612 NTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHK 671

Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
           +G  P+   + +L+    + GK     ++L F    D     A+Y ++
Sbjct: 672 TGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAYRRI 719



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 123/583 (21%), Positives = 252/583 (43%), Gaps = 14/583 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL+ F W+ ++  F  D  T   M+ ILGR  +L     +   + ++G   D   +  LI
Sbjct: 65  ALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLI 124

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR-YMMAKRYFNKMLSEGI 157
            +  +    +E++  F+ MK+ G + S+ +Y+ +  L  ++GR +      F +M ++GI
Sbjct: 125 SALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGI 184

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
           +P  +TYN  +         E A   F  MKS   + D VTYN +++ Y +    +EA  
Sbjct: 185 QPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAAN 244

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           +  EM+     P +++Y  ++  +      + A  + D M S  ++P+  TYT+LL    
Sbjct: 245 VLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYS 304

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
            AGK+ +  ++  +M      P ++  F  L+G+  K+ + +    + + M    +  + 
Sbjct: 305 RAGKVEQAMEIYNQMRTSNCTP-NSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDI 363

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             +  L+  F K  MY   +K+   +         ++  + + +++N +I+     G + 
Sbjct: 364 VTWNSLLGAFGKNGMYSEVLKVFRGM--------KKAGFEPDKATFNILIEAYGRCGSSD 415

Query: 398 KAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A   +  +++ G   D   FN L+   ++EG  + A  I+  + R     +  AY  ++
Sbjct: 416 QALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASML 475

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
            +Y   GE    K  +D++          L ++ +    +   V  A     +M   G  
Sbjct: 476 HAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYL 535

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKL 573
            +      ++     +G +++A     L+  +G  P+   ++ L+ +   +G        
Sbjct: 536 SDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEAT 595

Query: 574 LDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           L  C+      DL SY  V+ +    G+  +A  I  +++  G
Sbjct: 596 LRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNG 638



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 196/446 (43%), Gaps = 33/446 (7%)

Query: 131 ALFKLILRRGRYMMAKRYFNKM-LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           ++ K + R G++  A   FN M  S    P   T  VML       +L T  R F+ ++ 
Sbjct: 51  SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA-D 248
            G  LDV  Y ++I+  +R +K  EA   F +MKE   +P++++Y  +I  Y    R+ +
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE 170

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV-EVQKVLREMVERYIPPKDNSVFMK 307
           + L +F+EMK+  ++P+  TY   +   C +G +  E  ++  +M      P D   +  
Sbjct: 171 NILELFEEMKAQGIQPDEYTYNTAITA-CASGSLCEEATELFTQMKSSNCTP-DRVTYNA 228

Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
           LL V  K+G  N AA+VLK M           Y  L+  F +A + + A ++ D +V K 
Sbjct: 229 LLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKG 288

Query: 368 I---ILRPQSTLDMEASS---------YNPMIQHLCHN---------GQTGKAEIF---- 402
           I   +    S L   + +         YN M    C           G  GK + F    
Sbjct: 289 IEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMM 348

Query: 403 --FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
             F  +   GV  D V +N+L+    K G      ++ + M + G   D   +  LIE+Y
Sbjct: 349 VIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAY 408

Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
            R G    A +  D M++ G +P  + F +++ +L  +GR + A  ++  +     K N 
Sbjct: 409 GRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPND 468

Query: 520 DLVAKILEALLMRGHVEEALGRIDLM 545
              A +L A    G +E+    +D +
Sbjct: 469 IAYASMLHAYANGGELEKLKEMVDTL 494


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 126/541 (23%), Positives = 246/541 (45%), Gaps = 51/541 (9%)

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
           ++++ Y +KG+V+ ++ +FD M + G + S++S ++L   +++RG    A   +++M   
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
            I P   T  +M+  +  + K+E A+ F  +M+  G  L+ V+YN++++GY     ++ A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAVTYTALLP 274
           + +   M EK +    ++ T +IKGY    + ++A ++  EM+  D V  +   Y AL+ 
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDN-SVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
           G C  GKM +  +V  EM++  +  K N  V   L+   CK+G ++    +L  M +L +
Sbjct: 181 GYCKVGKMGDAIRVRDEMLK--VGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDL 238

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             ++  Y  L++ +C+  +  +A  + D+++ K I        +    +YN +++ LC  
Sbjct: 239 KPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGI--------EPTVVTYNTLLKGLCRF 290

Query: 394 GQTGKAEIFFRQLMKKGV----------LDPV--------------------------AF 417
           G    A   +  ++++GV          LD +                          AF
Sbjct: 291 GDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAF 350

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           N +I G  K G  D A E  K M   G   D   Y  L + Y + G   +A    + M +
Sbjct: 351 NTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEK 410

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           +   P+  ++ S++  LF   ++     ++  M  +G+  N+     ++     +G +++
Sbjct: 411 EEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDK 470

Query: 538 ALGRIDLMMQSGSVPNF---DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A      M+  G  PN      ++S L   G+   A  LL   +  D ++D    E   +
Sbjct: 471 AFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQN 530

Query: 595 A 595
           A
Sbjct: 531 A 531



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/541 (22%), Positives = 233/541 (43%), Gaps = 84/541 (15%)

Query: 70  GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
           G+++    +L+ M K  ++ D   +  L++ Y + G+  ++  + D M + G+E +V +Y
Sbjct: 221 GQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTY 280

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           + L K + R G Y  A R ++ ML  G+ P    Y  +L G F       A+  ++D+ +
Sbjct: 281 NTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILA 340

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
           RGI+  +  +NTMING  +  +MD A++ F  M+E   +P  I+Y T+  GY  V   ++
Sbjct: 341 RGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEE 400

Query: 250 A-----------------------------------LRIFDEMKSFDVKPNAVTYTALLP 274
           A                                   + +  EM +  + PN VTY AL+ 
Sbjct: 401 AFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIA 460

Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
           G CD G++ +      EM+ +   P +  +  K++    + G ++ A  +L+ M+   + 
Sbjct: 461 GWCDQGRLDKAFSAYFEMIGKGFAP-NVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLV 519

Query: 335 TEAGHYGILIENFCKAEMYD-RAIKLLDKLVEKEIILR-PQSTLDMEASSYNPMIQHLCH 392
            +       +E+F  A++      K+ D L E  I    P + +      YN  +  LC 
Sbjct: 520 LDHR----CLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVV------YNIAMAGLCK 569

Query: 393 NGQTGKAEIFF-----------------------------------RQLMKKGVLDPV-A 416
           +G+   A  FF                                    +++ KG++  +  
Sbjct: 570 SGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITT 629

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N L+ G  K G  D A  +   +  +G+  +   Y  LI+ Y + G P +A      M+
Sbjct: 630 YNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKML 689

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           ++G SP+   + S++    +   V+ A +++  M    V + +   +K++E  +  G V+
Sbjct: 690 KEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVK 749

Query: 537 E 537
           +
Sbjct: 750 K 750



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 153/662 (23%), Positives = 278/662 (41%), Gaps = 45/662 (6%)

Query: 17  LVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHA 75
           +VP  F   ++ N    A   E A++F R +E+ G F  +  ++  +++    +G +  A
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLG-FELNAVSYNSLVDGYVSLGDIEGA 120

Query: 76  RCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGVERSVKSYDALFK 134
           + +L  M +KGV  ++    +LI+ Y K+  V+E+ K+  ++ K+ GV     +Y AL  
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
              + G+   A R  ++ML  G++      N ++ G+  + ++    R    M+   +  
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           D  +Y T+++GY R     +A  +  +M  K IEPTV++Y T++KG        DALR++
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
             M    V PN V Y  LL GL   G       +  +++ R I  K    F  ++   CK
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGI-NKSIYAFNTMINGLCK 359

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA----------------------EM 352
            G ++ A +  K M  L    +   Y  L + +CK                       EM
Sbjct: 360 MGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEM 419

Query: 353 YDRAI----------KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
           Y+  I          KL+D L E +        L     +Y  +I   C  G+  KA   
Sbjct: 420 YNSLIVGLFTSKKISKLIDLLAEMD-----TRGLSPNVVTYGALIAGWCDQGRLDKAFSA 474

Query: 403 FRQLMKKGVLDPVAF-NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
           + +++ KG    V   + ++    + G  D A  +++ M    +  D         + +R
Sbjct: 475 YFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIR 534

Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
           K +       LD        P + ++   M  L + G+V  A R    +       +   
Sbjct: 535 KLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFT 594

Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL 578
              ++      G+V EA    D M+  G VPN   +++LL+ L + G    A +L D   
Sbjct: 595 YCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLH 654

Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTK 638
            +  I ++ +Y  ++D    +G    A  +  K++++G      +   LI G  ++ + +
Sbjct: 655 LKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVE 714

Query: 639 QA 640
           +A
Sbjct: 715 EA 716



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 5/219 (2%)

Query: 23  HNLVYNV----LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCI 78
           +N+VYN+    L  +     A +FF  +   G F  D  T+  +I      G +N A  +
Sbjct: 556 NNVVYNIAMAGLCKSGKVNDARRFFLGLSH-GSFTPDNFTYCTLIHGFSAAGYVNEAFNL 614

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
             +M  KG+  +   +  L+    K G +  + ++FD +   G+  +V +Y+ L     +
Sbjct: 615 RDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCK 674

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
            G    A     KML EGI P+  TY+ ++ GF     +E A++   +MK+  +   + T
Sbjct: 675 SGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIAT 734

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           ++ ++ G  +   + +  KL   M        + S+  M
Sbjct: 735 FSKLVEGCIQHGDVKKMSKLHNMMHMACPSAGITSHKQM 773


>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
 gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 642

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 129/559 (23%), Positives = 250/559 (44%), Gaps = 40/559 (7%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L  + DH LV ++L         +QFF+W  +   F HD  T++ +I  
Sbjct: 76  WGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRC 135

Query: 66  LGRV---GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           L      G++   R I   +    V     +   L+++ G+  +V +++ +F   K    
Sbjct: 136 LEEARLYGEM--YRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKC 193

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAI 181
           + +  +Y+++  ++++ G++      + +M +EG   P   TY+ ++  +    + ++AI
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R F++MK   +      Y T++  Y +  K+++A  LF EMK     PTV +YT +IKG 
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPP- 299
               R D+A   + +M    + P+ V    L+  L   G++ E+  V  EM + R  P  
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373

Query: 300 -KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
              N+V   L   +     +++  D +KA    S+      Y ILI+ +CK    ++A+ 
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKAD---SVSPSEFTYSILIDGYCKTNRVEKALL 430

Query: 359 LLDKLVEKEIILRPQSTLDM----------EASS-----------------YNPMIQHLC 391
           LL+++ EK     P +   +          EA++                 Y  MI+H  
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFG 490

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G+  +A   F ++  +G   D  A+N L+ G  K G  + A  +++ M   G   D +
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           ++  ++  + R G P  A    +++   G  P    + +++      G  + A+R+M+ M
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610

Query: 511 VEKGVKENLDLVAKILEAL 529
            +KG + +    + IL+A+
Sbjct: 611 KDKGFEYDAITYSSILDAV 629



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 1/235 (0%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           +F ++++ +        E AL     ++  G F      +  +I  LG+  +   A  + 
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKG-FPPCPAAYCSLINALGKAKRYEAANELF 467

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            ++ +        ++ V+I+ +GK G + E+V +F+ MK  G    V +Y+AL   +++ 
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G    A     KM   G     +++N++L GF  +     AI  FE +K  GI  D VTY
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           NT++  +      +EA ++  EMK+K  E   I+Y++++     V+   D +  F
Sbjct: 588 NTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/296 (20%), Positives = 121/296 (40%), Gaps = 14/296 (4%)

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           R +   +   Y  LI    +A +Y    + + ++V    +    + L       + +++ 
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVL-------SELVKA 171

Query: 390 LCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG--VP 446
           L       KA  +F++   +K       +N++I    +EG  +   E+   M   G   P
Sbjct: 172 LGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP 231

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D   Y  LI SY + G    A    D M ++   P   ++ +++   F+ G+V+ A  +
Sbjct: 232 -DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
            + M   G    +    ++++ L   G V+EA G    M++ G  P+    ++L+++L +
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            G+      +        C   + SY  V+ AL  +   ++  S  F  M+   V+
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 147/643 (22%), Positives = 266/643 (41%), Gaps = 107/643 (16%)

Query: 39  ALQFFRWV-ERAGL-FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE----- 91
           AL+F +WV ++ GL   H    +     IL +    + A+ IL  + + G+         
Sbjct: 93  ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGAL 152

Query: 92  -----------DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
                       +F++LI  Y K+G++  +V+ F+++  +G + SV + + +   +++  
Sbjct: 153 MDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDK 212

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R  +    F +M  +GI P   T+N+++ G  +   L+ A    + M+  G    +VTYN
Sbjct: 213 RTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYN 272

Query: 201 TMINGY---NRFKKMDE--------------------------------AEKLFAEMKEK 225
           T++N Y    R+K   E                                A  L  +M+++
Sbjct: 273 TLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKE 332

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
            I P  ++Y T+I G+V   +   A ++F+EM  FD+ PN VTY AL+ G C  G   E 
Sbjct: 333 MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 392

Query: 286 QKVLREMVE---RYIPPKDNSVFMKLLGVQ-------------------CKSGHLNAAAD 323
            ++L  M     R     + +  MK+  V                    C+ G L  A  
Sbjct: 393 LRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 452

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKA-------EMYDRAIK------------LLDKLV 364
            L  M R+ +   +  Y  +I  +            +D  IK            LL  L 
Sbjct: 453 FLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 512

Query: 365 EKEIILRPQSTLD--------MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPV 415
           +   ++  +  L+        +++  YN ++   C +G   +A   F ++++  VL D  
Sbjct: 513 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 572

Query: 416 AFNNLIRGHSKEGNPDSAFEIV-KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
            +++L+ G  ++G   +A  +    MGR  +  +   Y CL++   + G P  A    + 
Sbjct: 573 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 632

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M++ G  P +  F ++++S    G++  A+    +M   GV  NL     +L     +  
Sbjct: 633 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 692

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
           +   L     MM+ G  P+   F SL+  LS+ G     VKLL
Sbjct: 693 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLL 735



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 142/620 (22%), Positives = 242/620 (39%), Gaps = 73/620 (11%)

Query: 25  LVYNVLHGAK----NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           + YN L G      + E AL+    +E AGL              L   G +  A  +  
Sbjct: 374 VTYNALIGGHCHVGDFEEALRLLDHMEAAGLR-------------LNEHGNVTEAMKVYA 420

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
            M   G   D     VL+ S  + G + E+ K    M ++G+  +  +YD +       G
Sbjct: 421 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 480

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
             + A  +F+ M+  G  P+  TY  +L G      L  A +F   +     ++D V YN
Sbjct: 481 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 540

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE-MKS 259
           T++    +   + EA  LF +M + N+ P   +Y++++ G     +A  A+ +F   M  
Sbjct: 541 TLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR 600

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + PN V YT L+ GL  AG          EM+++   P D   F  ++    + G + 
Sbjct: 601 GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCP-DTVAFNAIIDSCSRRGQMM 659

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL----------DKLVEKEII 369
            A D    M    +      Y IL+  F K +   R + L           DKL    +I
Sbjct: 660 KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 719

Query: 370 L--RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSK 426
           L        D+       MI          ++ +   ++++ GV+   A +  LI G  +
Sbjct: 720 LGLSKSGIPDLGVKLLGKMIME--------ESTVVLHEMLENGVIPKHAQYITLINGMCR 771

Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
            G+   AF++   M   G      A   ++   L  G+  DA   LD M+     P  + 
Sbjct: 772 VGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIAT 831

Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
           F ++M     D                         AKI EAL ++G +E    ++D   
Sbjct: 832 FTTLMHRFCRD-------------------------AKIAEALKLKGVMELCGLKLD--- 863

Query: 547 QSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
               V  ++ L+  +   G + AA +L +    RD   ++ +Y  ++DA+ AA   +   
Sbjct: 864 ----VVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 919

Query: 607 SILFKIMEKGGVTDWKSSDK 626
            +L  + E+ G+  W  S +
Sbjct: 920 KLLTDLQER-GLISWGGSTQ 938



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 171/417 (41%), Gaps = 58/417 (13%)

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
           N  P+V  +  +I+ Y+     D A+  F+ +     KP+  T   +L  +    +   V
Sbjct: 160 NSIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELV 217

Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
             + REM ++ I P +   F  L+   C  G+L  A ++LK M           Y  L+ 
Sbjct: 218 WSLFREMSDKGICP-NVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLN 276

Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
            +CK   Y  AI+L+D ++ K I        + +  +YN  I +LC N ++ KA +  ++
Sbjct: 277 WYCKKGRYKAAIELIDYMICKGI--------EADVCTYNVFIDNLCTNHRSAKAYLLLKK 328

Query: 406 LMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
            M+K ++ P  V +N LI G  KEG    A ++   M +  +  +   Y  LI  +   G
Sbjct: 329 -MRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG 387

Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
           +  +A   LD      H  A+ L       L E G V  A +V   M   G   +     
Sbjct: 388 DFEEALRLLD------HMEAAGL------RLNEHGNVTEAMKVYAVMNCNGHGADHFTCN 435

Query: 524 KILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
            ++ +L   G + EA   +  M + G VPN                        +  DCI
Sbjct: 436 VLVSSLCRDGKLGEAEKFLCHMSRIGLVPN-----------------------SITYDCI 472

Query: 584 IDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           I+   Y  +       G  LNA+S    +++ G    + +   L+ GL + GN  +A
Sbjct: 473 IN--GYGSI-------GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 520


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 203/413 (49%), Gaps = 16/413 (3%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           ++V+++L G    + A +F  ++E  G F  +  ++  +I      G +  AR IL  M 
Sbjct: 179 SIVFDLLEGKL--KKAREFIGFMEGLG-FKPNVVSYNTIIHGYSSRGNIEGARRILDAMR 235

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            KG++ D   +  LI    K+G ++E+  +FD M ++G+  +  +Y+ L      +G   
Sbjct: 236 VKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLE 295

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A  Y ++M+ +GI P+  TYN+++   F+  ++  A    ++M+ +GI  D +TYN +I
Sbjct: 296 RAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILI 355

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
           NGY+R      A  L  EM  K IEPT ++YT++I       R  +A  +F+++    V 
Sbjct: 356 NGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 415

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ + + A++ G C  G +     +L+EM  + +PP D   F  L+  +C+ G +  A  
Sbjct: 416 PDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPP-DEVTFNTLMQGRCREGKVEEARM 474

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +L  M    I  +   Y  LI  + +      A  + D+++   I   P         +Y
Sbjct: 475 LLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEML--SIGFNPTLL------TY 526

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
           N +I+ LC N +   AE   ++++ KG+  D   + +LI G    GN D+  E
Sbjct: 527 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM---GNVDTLVE 576



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 194/420 (46%), Gaps = 18/420 (4%)

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           ++  +L + R   S  +     L  G+   A+ +   M   G +P   +YN ++ G+   
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 221

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
             +E A R  + M+ +GI  D  TY ++I+G  +  +++EA  LF +M E  + P  ++Y
Sbjct: 222 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 281

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
            T+I GY      + A    DEM    + P+  TY  L+  L   G+M E   +++EM +
Sbjct: 282 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 341

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK----A 350
           + I P D   +  L+    + G+   A D+   M+   I      Y  LI    +     
Sbjct: 342 KGIIP-DAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 400

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
           E  D   K+LD+ V  ++I+            +N MI   C NG   +A +  +++ +K 
Sbjct: 401 EADDLFEKILDQGVSPDVIM------------FNAMIDGHCANGNVERAFMLLKEMDRKS 448

Query: 411 V-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           V  D V FN L++G  +EG  + A  ++  M  RG+  D  +Y  LI  Y R+G+  DA 
Sbjct: 449 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAF 508

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              D M+  G +P    + ++++ L ++     A  ++K MV KG+  +      ++E +
Sbjct: 509 XVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 188/402 (46%), Gaps = 10/402 (2%)

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
            L  KL+ A  F   M+  G   +VV+YNT+I+GY+    ++ A ++   M+ K IEP  
Sbjct: 184 LLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDS 243

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +Y ++I G     R ++A  +FD+M    + PNAVTY  L+ G C+ G +        E
Sbjct: 244 YTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDE 303

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           MV++ I P   S +  L+      G +  A D++K M +  I  +A  Y ILI  + +  
Sbjct: 304 MVKKGIMPS-VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
              RA  L ++++ K I   P         +Y  +I  L    +  +A+  F +++ +GV
Sbjct: 363 NAKRAFDLHNEMLSKGI--EPTHV------TYTSLIYVLSRRNRMKEADDLFEKILDQGV 414

Query: 412 -LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             D + FN +I GH   GN + AF ++K M R+ VP D   +  L++   R+G+  +A+ 
Sbjct: 415 SPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 474

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
            LD M   G  P    + +++      G ++ A  V   M+  G    L     +++ L 
Sbjct: 475 LLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLC 534

Query: 531 MRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVK 572
                + A   +  M+  G  P+  + LS++   G     V+
Sbjct: 535 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 175/379 (46%), Gaps = 13/379 (3%)

Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
           M+    KPN V+Y  ++ G    G +   +++L  M  + I P D+  +  L+   CK G
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEP-DSYTYGSLISGMCKEG 257

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
            L  A+ +   M+ + +   A  Y  LI+ +C     +RA    D++V+K I+       
Sbjct: 258 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM------- 310

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
               S+YN ++  L   G+ G+A+   +++ KKG++ D + +N LI G+S+ GN   AF+
Sbjct: 311 -PSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFD 369

Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
           +   M  +G+      Y  LI    R+    +A    + +++ G SP   +F ++++   
Sbjct: 370 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHC 429

Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN-- 553
            +G V+ A  ++K M  K V  +      +++     G VEEA   +D M   G  P+  
Sbjct: 430 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHI 489

Query: 554 -FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
            +++L+S    +G    A  + D  L       L +Y  ++  L    +   A  +L ++
Sbjct: 490 SYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549

Query: 613 MEKGGVTDWKSSDKLIAGL 631
           + KG   D  +   LI G+
Sbjct: 550 VNKGISPDDSTYLSLIEGM 568



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 141/329 (42%), Gaps = 47/329 (14%)

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           G++  A  +L AM    I  ++  YG LI   CK    + A  L DK+VE  I L P   
Sbjct: 222 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE--IGLVPN-- 277

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAF 434
               A +YN +I   C+ G   +A  +  +++KKG++  V+ +N L+     EG    A 
Sbjct: 278 ----AVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 333

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
           +++K M ++G+  DA  Y  LI  Y R G    A    + M+  G  P    + S++  L
Sbjct: 334 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVL 393

Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
               R++ A  + + ++++GV  ++ +   +++     G+VE A   +  M +    P+ 
Sbjct: 394 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDE 453

Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
             F++L+     +GK   A  LLD                                   +
Sbjct: 454 VTFNTLMQGRCREGKVEEARMLLD-----------------------------------E 478

Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +  +G   D  S + LI+G  + G+ K A
Sbjct: 479 MKXRGIKPDHISYNTLISGYGRRGDIKDA 507



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 7/244 (2%)

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDS 474
           V++N +I G+S  GN + A  I+  M  +G+  D+  Y  LI    ++G   +A    D 
Sbjct: 209 VSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDK 268

Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
           M+E G  P +  + ++++     G ++ A      MV+KG+  ++     ++ AL M G 
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 328

Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
           + EA   I  M + G +P+   ++ L++  S  G    A  L +  L +       +Y  
Sbjct: 329 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTS 388

Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEM 651
           ++  L    +   A  +  KI+++G   D    + +I G    GN ++A +L +    EM
Sbjct: 389 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLK----EM 444

Query: 652 SRGS 655
            R S
Sbjct: 445 DRKS 448


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 235/550 (42%), Gaps = 27/550 (4%)

Query: 98  IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
           + ++   G+  E++ +   +++ G   S+ +  AL +L+ R G    A   F +M +EG 
Sbjct: 155 LHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGP 214

Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
            P+  T+N ML GF     +  A      M   GI+ DV +YN +I G+  F    +A K
Sbjct: 215 RPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFK 274

Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
           +F  M     EPTV++Y  ++       R  +A R+FDEM    ++ N +T+  L+ G  
Sbjct: 275 MFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYA 334

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
            +G+M +     REM  R + P D+  F  +     K G+   AA ++      S    A
Sbjct: 335 KSGQMDQASAAYREMQARGLVP-DSCTFNIIAARAHKFGY---AAQLVHDHDMFSSHMSA 390

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
               +L+   C     D A +LL   +E+ + LR         + +N +I      G   
Sbjct: 391 DGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLR--------VTGFNALIAAYSKEGLHE 442

Query: 398 KAEIFFRQLMKKGVLDPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
           +A   +R + K G L P +  FN LI G   +G  D A  +++ M  +G        ICL
Sbjct: 443 EASELYRIMNKLG-LAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICL 501

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
            ++Y R G    A    D M   G       F + +  L     V  A +    M  +G+
Sbjct: 502 -DAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGI 560

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---DSLLSVLSEKGK-TIAAV 571
             N      I+ AL   G++ EAL  +  M QSG VP+    + L+  L  +GK  +   
Sbjct: 561 VPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDN 620

Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTD------WKSSD 625
            LLD C       D  +Y  +++A   A    +A + + K++  G   D      W  S 
Sbjct: 621 LLLDMC-SNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSL 679

Query: 626 KLIAGLNQEG 635
                LNQ G
Sbjct: 680 CRNHMLNQAG 689



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/494 (21%), Positives = 209/494 (42%), Gaps = 50/494 (10%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M K G+  D   + +LI+ +   G  +++ K+F+ M + G E +V +Y+ L  ++   GR
Sbjct: 244 MGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGR 303

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              A+R F++M   GI+    T+NV++ G+  S +++ A   + +M++RG+  D  T+N 
Sbjct: 304 MPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNI 363

Query: 202 MINGYNRF--------------------------------KKMDEAEKLFAEMKEKNIEP 229
           +    ++F                                 ++D+A +L     E+ +  
Sbjct: 364 IAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPL 423

Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
            V  +  +I  Y      ++A  ++  M    + P++ T+  L+ GLC+ G++ E Q +L
Sbjct: 424 RVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLL 483

Query: 290 REMVER-YIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             MV + Y     ++ F   L    + G+   A      M  + + T+   +   I   C
Sbjct: 484 EHMVSKGYCL---STSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLC 540

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           + +  + A +   ++  + I+  P +       +YN +I  LC  G   +A    + + +
Sbjct: 541 RLDCVNEAYQAFAEMTSRGIV--PNNI------TYNSIISALCKAGNMTEALKLVQNMRQ 592

Query: 409 KGVLDPVAFNN-LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G++  +  +N LI G  +EG       ++  M   G+  D   Y  +I +Y R  +   
Sbjct: 593 SGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNS 652

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A   ++ M+  G  P    +   M SL  +  +  A +++  +V      N      +  
Sbjct: 653 AMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPN-----SVTY 707

Query: 528 ALLMRGHVEEALGR 541
             LM G   + L R
Sbjct: 708 NTLMDGICSDVLDR 721



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 149/334 (44%), Gaps = 4/334 (1%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           E A + +R + + GL      T   +I  L   G+L+ A+ +L  M  KG       F +
Sbjct: 442 EEASELYRIMNKLGL-APSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTS-FTI 499

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
            +++Y + G    ++K +D M  +G++    ++ A    + R      A + F +M S G
Sbjct: 500 CLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRG 559

Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
           I P   TYN ++     +  +  A++  ++M+  G+  D+ T N +I+G  R  K+   +
Sbjct: 560 IVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVD 619

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
            L  +M    + P  ++Y T+I  Y   +  + A+   ++M     +P+  TY   +  L
Sbjct: 620 NLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSL 679

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
           C    + +  K+L E+V     P  NSV    L     S  L+ A  +   +I+++    
Sbjct: 680 CRNHMLNQAGKLLDELVAVDCSP--NSVTYNTLMDGICSDVLDRAMILTGRLIKMAFKPN 737

Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
                + + +FCK    +RA+   +KL E   + 
Sbjct: 738 TITLNVFLSHFCKQGFGNRALMWAEKLREDSFVF 771



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 105/494 (21%), Positives = 197/494 (39%), Gaps = 77/494 (15%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           S  A + F  + R+G       T+  ++++L   G++  AR +  +M + G+Q +   F 
Sbjct: 269 SRDAFKMFEGMHRSGC-EPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFN 327

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGV--------------------ERSVKSYDALFKL 135
           VLI+ Y K G + ++   +  M+  G+                     + V  +D     
Sbjct: 328 VLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSH 387

Query: 136 ILRRGRYMMAKRY-FNKMLSEGIE----------PTRHT-YNVMLWGFFLSLKLETAIRF 183
           +   G  M+  R  ++  L +  E          P R T +N ++  +      E A   
Sbjct: 388 MSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASEL 447

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           +  M   G++    T+N +I G     ++DEA+ L   M  K    +  S+T  +  Y  
Sbjct: 448 YRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SFTICLDAYFR 506

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
              A  AL+ +D+M +  ++ + + ++A + GLC    + E  +   EM  R I P +N 
Sbjct: 507 DGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVP-NNI 565

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  ++   CK+G++  A  +++ M +  +  +     ILI+  C+    +  +K++D L
Sbjct: 566 TYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCR----EGKLKMVDNL 621

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRG 423
           +           LDM            C NG T                D V +N +I  
Sbjct: 622 L-----------LDM------------CSNGLTP---------------DTVTYNTIINA 643

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
           + +  + +SA   +  M   G   D   Y   + S  R      A   LD ++    SP 
Sbjct: 644 YCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPN 703

Query: 484 SSLFRSVMESLFED 497
           S  + ++M+ +  D
Sbjct: 704 SVTYNTLMDGICSD 717



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 19/265 (7%)

Query: 393 NGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
           +G+   A   F ++  +G    +A FN ++ G    G    A  ++ IMG+ G+  D  +
Sbjct: 196 SGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCS 255

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
           Y  LI+ +   G   DA    + M   G  P    +  +++ L  +GR+  A R+   M 
Sbjct: 256 YNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMA 315

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAV 571
           + G++ N      +++     G +++A      M   G VP+  +   + +   K   A 
Sbjct: 316 QVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAA 375

Query: 572 KLLD---------FCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           +L+             G D ++    ++  LD         +A+ +L   +E+G      
Sbjct: 376 QLVHDHDMFSSHMSADGLDMLVCRLCWDHRLD---------DAWELLLGAIEQGVPLRVT 426

Query: 623 SSDKLIAGLNQEGNTKQADILSRMI 647
             + LIA  ++EG  ++A  L R++
Sbjct: 427 GFNALIAAYSKEGLHEEASELYRIM 451


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 215/463 (46%), Gaps = 12/463 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  M++   + G+++ A  +L +M ++G   ++  + VL+    KKG ++++  + + M
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM 276

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+  S  +Y+ L     ++G ++ A     +M++    PT  TYN +++G    +++
Sbjct: 277 LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV 336

Query: 178 ETAIRF-FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
            T +R  F DM     + D+V++N+++ GY R   + EA  LF E+K +++ PTVI+Y T
Sbjct: 337 -TGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNT 395

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G       D ALR+  EM    + P+  TYT L+ G    G +   +    EM+ + 
Sbjct: 396 LIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P   +   +++G + K    + A  + + M+    P +   Y + +   C+   ++ A
Sbjct: 456 LKPDRFAYNTRIVG-EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEA 514

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-V 415
             LL+ +V   +I  P         +Y  +I     NG   KA   F +++ KGV    V
Sbjct: 515 CDLLENMVSDGLI--PDHV------TYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVV 566

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +  LI  H+ +   D AF     M  + VP +   Y  +I          +A    D M
Sbjct: 567 TYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEM 626

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
            E G  P    +  ++      G  + A R+ + M+++ ++ +
Sbjct: 627 EEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPD 669



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 251/574 (43%), Gaps = 65/574 (11%)

Query: 22  DHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK-LNHARCIL 79
           D +L   VLH  +     AL+FFRWV     F         +++IL  VG  L HA   +
Sbjct: 84  DPHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDIL--VGNDLMHAAYWV 141

Query: 80  LDMPKKGVQWD-EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           ++   + V ++   + +VLI  +         + +FD M + G+   VK+ + + +++  
Sbjct: 142 ME---RVVSFEMHGVVDVLIAGH------VXCLLVFDKMIRNGLLPDVKNCNRILRVLRD 192

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
                 AK  +  M   GI+PT  TYN ML  +    +++ A+    +M+ RG   + VT
Sbjct: 193 ENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVT 252

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN ++NG ++  ++++A+ L  EM    +  +  +Y  +I G+       +A  + +EM 
Sbjct: 253 YNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV 312

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           +    P   TY  L+ GLC   ++  V+    +M++    P D   F  LL   C++G +
Sbjct: 313 NRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTP-DIVSFNSLLYGYCRTGCI 371

Query: 319 NAA---ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           + A    D LK   R  +PT    Y  LI   C     D A++L  ++ ++   L P   
Sbjct: 372 SEAFLLFDELKC--RDLVPTVIT-YNTLIHGLCMWGYLDAALRLKKEMTDQG--LFP--- 423

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
              +  +Y  ++      G    A  FF +++ KG+  D  A+N  I G  K  +   AF
Sbjct: 424 ---DIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAF 480

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            + + M   G P D   Y   + +  ++G   +A   L++M+ DG  P    + S++   
Sbjct: 481 SMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGF 540

Query: 495 FEDGRVQTASRVMKSMVEKGV----------------KENLDLV----AKILE------- 527
            ++G ++ A  V   M+ KGV                K+ LDL     +K+LE       
Sbjct: 541 VKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANV 600

Query: 528 --------ALLMRGHVEEALGRIDLMMQSGSVPN 553
                    L M   ++EA    D M + G +PN
Sbjct: 601 ITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPN 634



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/480 (21%), Positives = 212/480 (44%), Gaps = 10/480 (2%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +++ +L     L+ A+ +   M + G++     +  +++SY K+G V +++++   M++ 
Sbjct: 185 RILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQER 244

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G   +  +Y+ L   + ++G    AK    +ML+ G+  + +TYN ++ GF        A
Sbjct: 245 GCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEA 304

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
               E+M +R     + TYNT++ G  ++ ++      F++M +    P ++S+ +++ G
Sbjct: 305 FDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYG 364

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y       +A  +FDE+K  D+ P  +TY  L+ GLC  G +    ++ +EM ++ + P 
Sbjct: 365 YCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFP- 423

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+    K G+++ A      M+   +  +   Y   I    K      A  + 
Sbjct: 424 DIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQ 483

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           ++++         +    +  +YN  +  LC  G   +A      ++  G++ D V + +
Sbjct: 484 EEML--------AAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTS 535

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +I G  K G+   A E+   M  +GV      Y  LI ++  K     A      M+E  
Sbjct: 536 IINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKS 595

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
                  + +++  L    R+  A +    M EKG+  N      ++      G+ EEAL
Sbjct: 596 VPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEAL 655



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 161/337 (47%), Gaps = 23/337 (6%)

Query: 13  KIRALVPQFDHNLVYNVL-HGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           K R LVP     + YN L HG       + AL+  + +   GLF  D  T+  ++    +
Sbjct: 382 KCRDLVPTV---ITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF-PDIFTYTILVNGCFK 437

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL---GVERS 125
           +G ++ AR    +M  KG++ D   +   I   G+  I   SV  F + +++   G    
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRI--VGEMKIADTSVA-FSMQEEMLAAGFPPD 494

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V +Y+     + ++G +  A      M+S+G+ P   TY  ++ GF  +  L  A   F 
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M S+G++  VVTY  +I+ +   + +D A   F++M EK++   VI+Y  +I G     
Sbjct: 555 EMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR 614

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD--NS 303
           R D+A + FDEM+   + PN  +YT L+   C+ G   E  ++ REM++R I P    +S
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHS 674

Query: 304 VFMKLL-------GVQCKSGHLNAAADVLKAMIRLSI 333
           VF+K L        VQC    +    D +   I + I
Sbjct: 675 VFLKNLHRDYQVHAVQCVESLIQNVEDNINVRIEMLI 711


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 150/635 (23%), Positives = 264/635 (41%), Gaps = 46/635 (7%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRV-GKLNHARCILLDMPKKGVQWDE----DM 93
           AL FF WV R   F H   +H  ++++L R     N+ + +L  +   G   D     D 
Sbjct: 69  ALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDA 128

Query: 94  FEVLIESYGKKGIVQESV------------------KIFDIMKQLGVERSVKSYDALFKL 135
            + +    GK+ ++                      K++  + Q G+     +Y+ +   
Sbjct: 129 IQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMA 188

Query: 136 ILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLD 195
             ++G   +A RYF  +   G++   +T N +L G+  +  L  A      M   G   +
Sbjct: 189 YCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRN 248

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
             +Y  +I G    + + EA  L   M +      +  YT +IKG     R  DA  + D
Sbjct: 249 EYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLD 308

Query: 256 EMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD---NSVFMKLLGVQ 312
           EM    V P+  TY A++ G C +G+M +   +   M +    P D   NS+   L G  
Sbjct: 309 EMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-- 366

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
              G L+ A ++L   I          +  LI  +CKAE  D A+++      K  ++  
Sbjct: 367 ---GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV------KSNMISS 417

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPD 431
              LD++A  Y  +I  L    +  +A+    ++   G+  + V + ++I G+ K G   
Sbjct: 418 NCKLDLQA--YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVG 475

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
           +A E+ K+M   G   +A  Y  LI   ++  +   A   +  M EDG +P    + +++
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLI 535

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
           +   +      A R+ + M + G+  +      + +AL   G  EEA      +++ G V
Sbjct: 536 QGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAY---SFLVRKGVV 592

Query: 552 ---PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
                + SL+   S+ G T  A  L++  +   C  DL +Y  +L AL    K   A SI
Sbjct: 593 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSI 652

Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           L ++   G   +  +   +I+ + +EG    A  L
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSL 687



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 141/635 (22%), Positives = 267/635 (42%), Gaps = 54/635 (8%)

Query: 14  IRALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           +R +VP  + +N + +    +   + AL     +E+ G  N D  T+  +I  L   GKL
Sbjct: 312 LRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGC-NPDDWTYNSLIYGLCG-GKL 369

Query: 73  NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
           + A  +L     +G       F  LI  Y K   + +++++   M     +  +++Y  L
Sbjct: 370 DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVL 429

Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
             +++++ R   AK   N+M + G+ P    Y  ++ G+     +  A+  F+ M+  G 
Sbjct: 430 INVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGC 489

Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
             +  TY ++I G  + KK+ +A  L  +M+E  I P VI+YTT+I+G       D+A R
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFR 549

Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
           +F+ M+   + P+   Y  L   LC +G+  E    L     R         +  L+   
Sbjct: 550 LFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL----VRKGVVLTKVTYTSLVDGF 605

Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL--------- 363
            K+G+ + AA +++ M+      +   Y +L++  CK +  + A+ +LD++         
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665

Query: 364 VEKEIILRP------------------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
           V   II+                     S     A++Y   I   C  GQ  +AE    +
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 725

Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG- 463
           + + GV  D V ++  I G    G  D AF  +K M       +   Y  L++ +L+   
Sbjct: 726 MERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSL 785

Query: 464 ---------------EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
                          E       L+ M++ G +P    + S++    +  R++ A  ++ 
Sbjct: 786 INAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLD 845

Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEKG 565
            M+ K +  N ++   +++         + +  +  M++ G  P  +S   L+  L ++G
Sbjct: 846 HMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEG 905

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
               A  L    LG D   +  +++ + D LL AG
Sbjct: 906 DYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAG 940



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 107/276 (38%), Gaps = 17/276 (6%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
           +HA   F  +  +G       T+   I    ++G++  A  ++ +M + GV  D   + +
Sbjct: 682 DHAKSLFNEMISSG-HKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHI 740

Query: 97  LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR----RGRYMMAKRYFN-- 150
            I   G  G +  +      M     E +  +Y  L K  L+       Y+     +N  
Sbjct: 741 FINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWI 800

Query: 151 ----------KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
                     +M+  G+ PT  TY+ ++ GF  + +LE A    + M  + IS +   Y 
Sbjct: 801 ELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYT 860

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I      K   +      +M E   +P + SY  +I G       D A  +F ++   
Sbjct: 861 MLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGM 920

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           D   N V +  L  GL  AG +    ++L  M  R+
Sbjct: 921 DYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRH 956


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 215/463 (46%), Gaps = 12/463 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  M++   + G+++ A  +L +M ++G   ++  + VL+    KKG ++++  + + M
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM 276

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              G+  S  +Y+ L     ++G ++ A     +M++    PT  TYN +++G    +++
Sbjct: 277 LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV 336

Query: 178 ETAIRF-FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
            T +R  F DM     + D+V++N+++ GY R   + EA  LF E+K +++ PTVI+Y T
Sbjct: 337 -TGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNT 395

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G       D ALR+  EM    + P+  TYT L+ G    G +   +    EM+ + 
Sbjct: 396 LIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           + P   +   +++G + K    + A  + + M+    P +   Y + +   C+   ++ A
Sbjct: 456 LKPDRFAYNTRIVG-EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEA 514

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-V 415
             LL+ +V   +I  P         +Y  +I     NG   KA   F +++ KGV    V
Sbjct: 515 CDLLENMVSDGLI--PDHV------TYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVV 566

Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
            +  LI  H+ +   D AF     M  + VP +   Y  +I          +A    D M
Sbjct: 567 TYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEM 626

Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
            E G  P    +  ++      G  + A R+ + M+++ ++ +
Sbjct: 627 EEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPD 669



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 144/574 (25%), Positives = 251/574 (43%), Gaps = 65/574 (11%)

Query: 22  DHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK-LNHARCIL 79
           D +L   VLH  +     AL+FFRWV     F         +++IL  VG  L HA   +
Sbjct: 84  DPHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDIL--VGNDLMHAAYWV 141

Query: 80  LDMPKKGVQWD-EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           ++   + V ++   + +VLI  +         + +FD M + G+   VK+ + + +++  
Sbjct: 142 ME---RVVSFEMHGVVDVLIAGH------VXCLLVFDKMIRNGLLPDVKNCNRILRVLRD 192

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
                 AK  +  M   GI+PT  TYN ML  +    +++ A+    +M+ RG   + VT
Sbjct: 193 ENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVT 252

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           YN ++NG ++  ++++A+ L  EM    +  +  +Y  +I G+       +A  + +EM 
Sbjct: 253 YNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV 312

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
           +    P   TY  L+ GLC   ++  V+    +M++    P D   F  LL   C++G +
Sbjct: 313 NRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTP-DIVSFNSLLYGYCRTGCI 371

Query: 319 NAA---ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
           + A    D LK   R  +PT    Y  LI   C     D A++L  ++ ++ +   P   
Sbjct: 372 SEAFLLFDELKC--RDLVPTVIT-YNTLIHGLCMWGYLDAALRLKKEMTDQGLF--P--- 423

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
              +  +Y  ++      G    A  FF +++ KG+  D  A+N  I G  K  +   AF
Sbjct: 424 ---DIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAF 480

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            + + M   G P D   Y   + +  ++G   +A   L++M+ DG  P    + S++   
Sbjct: 481 SMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGF 540

Query: 495 FEDGRVQTASRVMKSMVEKGV----------------KENLDLV----AKILE------- 527
            ++G ++ A  V   M+ KGV                K+ LDL     +K+LE       
Sbjct: 541 VKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANV 600

Query: 528 --------ALLMRGHVEEALGRIDLMMQSGSVPN 553
                    L M   ++EA    D M + G +PN
Sbjct: 601 ITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPN 634



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/480 (21%), Positives = 212/480 (44%), Gaps = 10/480 (2%)

Query: 61  KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
           +++ +L     L+ A+ +   M + G++     +  +++SY K+G V +++++   M++ 
Sbjct: 185 RILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQER 244

Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
           G   +  +Y+ L   + ++G    AK    +ML+ G+  + +TYN ++ GF        A
Sbjct: 245 GCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEA 304

Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
               E+M +R     + TYNT++ G  ++ ++      F++M +    P ++S+ +++ G
Sbjct: 305 FDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYG 364

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
           Y       +A  +FDE+K  D+ P  +TY  L+ GLC  G +    ++ +EM ++ + P 
Sbjct: 365 YCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFP- 423

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   +  L+    K G+++ A      M+   +  +   Y   I    K      A  + 
Sbjct: 424 DIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQ 483

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
           ++++         +    +  +YN  +  LC  G   +A      ++  G++ D V + +
Sbjct: 484 EEML--------AAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTS 535

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +I G  K G+   A E+   M  +GV      Y  LI ++  K     A      M+E  
Sbjct: 536 IINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKS 595

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
                  + +++  L    R+  A +    M EKG+  N      ++      G+ EEAL
Sbjct: 596 VPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEAL 655



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 171/355 (48%), Gaps = 29/355 (8%)

Query: 13  KIRALVPQFDHNLVYNVL-HGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGR 68
           K R LVP     + YN L HG       + AL+  + +   GLF  D  T+  ++    +
Sbjct: 382 KCRDLVPTV---ITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF-PDIFTYTILVNGCFK 437

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL---GVERS 125
           +G ++ AR    +M  KG++ D   +   I   G+  I   SV  F + +++   G    
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRI--VGEMKIADTSVA-FSMQEEMLAAGFPPD 494

Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
           V +Y+     + ++G +  A      M+S+G+ P   TY  ++ GF  +  L  A   F 
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554

Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
           +M S+G++  VVTY  +I+ +   + +D A   F++M EK++   VI+Y  +I G     
Sbjct: 555 EMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR 614

Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD--NS 303
           R D+A + FDEM+   + PN  +YT L+   C+ G   E  ++ REM++R I P    +S
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHS 674

Query: 304 VFMKLL-------GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           VF+K L        VQC    +    D +   +RL  P +     ++ ENF +++
Sbjct: 675 VFLKNLHRDYQVHAVQCVESLIQNVEDNIN--VRLLRPRK----NVMEENFARSQ 723


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 202/436 (46%), Gaps = 37/436 (8%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDM-FEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
           ++G ++    +L DM  +G + +  +   V++    K G + E++ +F+ MK  G+   +
Sbjct: 352 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 411

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
            +Y  +   + + G++ MA   +++M  + I P   T+  +L G      L  A    + 
Sbjct: 412 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 471

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           + S G +LD+V YN +I+GY +   ++EA +LF  + E  I P+V ++ ++I GY   + 
Sbjct: 472 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 531

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD----- 301
             +A +I D +K + + P+ V+YT L+    + G    + ++ REM    IPP +     
Sbjct: 532 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 591

Query: 302 --------------NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
                         N V  + +  +CK G        L+ M    IP +   Y  +I+  
Sbjct: 592 IFKGLCRGWKHENCNHVLRERIFEKCKQG--------LRDMESEGIPPDQITYNTIIQYL 643

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           C+ +    A   L+       I++ ++ LD  +++YN +I  LC  G   KA+ F   L 
Sbjct: 644 CRVKHLSGAFVFLE-------IMKSRN-LDASSATYNILIDSLCVYGYIRKADSFIYSLQ 695

Query: 408 KKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
           ++ V L   A+  LI+ H  +G+P+ A ++   +  RG       Y  +I    R+    
Sbjct: 696 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVN 755

Query: 467 DAKTALDSMIEDGHSP 482
           ++K     M+  G SP
Sbjct: 756 ESKFFFCLMLSQGISP 771



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 130/585 (22%), Positives = 251/585 (42%), Gaps = 79/585 (13%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G+ WD     +L+    +  +V +S+ I   MK   +  S +SY+++          +  
Sbjct: 137 GLVWD-----MLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSV----------LYH 181

Query: 146 KRYFNKMLS---EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
            R  +KM     E  +   HTY+ ++ G     KLE A+ F    + + I   VV++N++
Sbjct: 182 FRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSI 241

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           ++GY +   +D A+  F  + +  + P+V S+  +I G   V    +AL +  +M    V
Sbjct: 242 MSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 301

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P++VTY  L  G    G +    +V+R+M+++ + P D   +  LL  QC+ G+++   
Sbjct: 302 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSP-DVITYTILLCGQCQLGNIDMGL 360

Query: 323 DVLKAM--------------IRLSIPTEAGH----------------------YGILIEN 346
            +LK M              + LS   + G                       Y I+I  
Sbjct: 361 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 420

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
            CK   +D A+ L D++ +K I+  P S       ++  ++  LC  G   +A      L
Sbjct: 421 LCKLGKFDMALWLYDEMCDKRIL--PNS------RTHGALLLGLCQKGMLLEARSLLDSL 472

Query: 407 MKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           +  G  LD V +N +I G++K G  + A E+ K++   G+      +  LI  Y +    
Sbjct: 473 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 532

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
           A+A+  LD +   G +P+   + ++M++    G  ++   + + M  +G+       + I
Sbjct: 533 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 592

Query: 526 LEAL-----------LMRGHVEEALGRIDLMMQSGSVP----NFDSLLSVLSEKGKTIAA 570
            + L           ++R  + E   +    M+S  +P     +++++  L        A
Sbjct: 593 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 652

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
              L+    R+     A+Y  ++D+L   G    A S ++ + E+
Sbjct: 653 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQ 697



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 101/463 (21%), Positives = 182/463 (39%), Gaps = 63/463 (13%)

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F   +S G+  D++ + +     +R + +D++  +  +MK++N+  +  SY +++  +  
Sbjct: 130 FRKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRE 184

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
            ++  D   ++ E+K      N  TY+ ++ GLC   K+ +    LR    + I P   S
Sbjct: 185 TDKMWD---VYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 237

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
            F  ++   CK G ++ A      +++   +P+   H                       
Sbjct: 238 -FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSH----------------------- 273

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLI 421
                                N +I  LC  G   +A      + K GV  D V +N L 
Sbjct: 274 ---------------------NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILA 312

Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
           +G    G    A+E+++ M  +G+  D   Y  L+    + G        L  M+  G  
Sbjct: 313 KGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE 372

Query: 482 PASSLFRSVMES-LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
             S +  SVM S L + GR+  A  +   M   G+  +L   + ++  L   G  + AL 
Sbjct: 373 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 432

Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
             D M     +PN     +LL  L +KG  + A  LLD  +     +D+  Y  V+D   
Sbjct: 433 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 492

Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +G    A  +   ++E G      + + LI G  +  N  +A
Sbjct: 493 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 535



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 1/149 (0%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q  +N +   L   K+   A  F   ++   L +    T+  +I+ L   G +  A   +
Sbjct: 633 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL-DASSATYNILIDSLCVYGYIRKADSFI 691

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             + ++ V   +  +  LI+++  KG  + +VK+F  +   G   S++ Y A+   + RR
Sbjct: 692 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 751

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
                +K +F  MLS+GI P      VM+
Sbjct: 752 HLVNESKFFFCLMLSQGISPDLDICEVMI 780


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 150/637 (23%), Positives = 269/637 (42%), Gaps = 81/637 (12%)

Query: 4   RAWTTRLQNKIRALVPQFDHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKM 62
           R W++   ++ R L+   D +L+  VL+  +   E A +FF W++R       R+    M
Sbjct: 107 RKWSS---HQFRLLLT--DPDLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAM 161

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIES-----------------YGKKG 105
           +EIL     ++ A  +       G+   +D+   LI+                  Y KK 
Sbjct: 162 LEILAENDLMSEAYLVAERSINLGMHEIDDL---LIDGNFDKLVALKLLDLLLWVYTKKS 218

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM-MAKRYFNKMLSEGIEPTRHTY 164
           + ++ +  F+ M + G   SV++ + + + +LR  R M  A+  +  M+  GI PT  T+
Sbjct: 219 MAEKCLLSFEKMIRKGFLPSVRNCNIVLR-VLRDSRMMNKAQEVYETMVMHGIMPTVITF 277

Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
           N ML   F +  LE   + + +MK R I    VTYN +ING+++  KM+EA +   +M+ 
Sbjct: 278 NTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQR 337

Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
                T  S+  +I+GY      D+A  + DEM +  + P   TY   +  LC+ G++ +
Sbjct: 338 SGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDD 397

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            +++L  M                           AA DV+              Y  L+
Sbjct: 398 ARELLSSM---------------------------AAPDVVS-------------YNTLM 417

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
             + K   +  A  L D L            ++    +YN +I  LC +G    A+    
Sbjct: 418 HGYIKMRKFVEASLLFDDL--------KAGNINPSIVTYNTLIDGLCESGNLEGAQRLKE 469

Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
           ++  + +  D + +  L++G  K GN   A EI   M R+G+  D  AY       LR G
Sbjct: 470 EMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLG 529

Query: 464 EPADAKTALDSMI-EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLV 522
           +   A    + M+ ED H+P  +++   ++ L + G ++ A    + +   G+  +    
Sbjct: 530 DSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTY 589

Query: 523 AKILEALLMRGHVEEALGRIDLMMQ---SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLG 579
             ++   L +G  + A    D M+    S SV  +  L+   ++ G+   A +       
Sbjct: 590 TTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKK 649

Query: 580 RDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
           R    ++ ++  +L  +  AG    AY  L K+ E+G
Sbjct: 650 RGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEG 686



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 219/465 (47%), Gaps = 27/465 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M++   + G L     I L+M ++ +++ E  + +LI  + K G ++E+ +    M++ G
Sbjct: 280 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSG 339

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
              +  S++ L +   ++G +  A    ++ML+ GI PT  TYN+ +       +++ A 
Sbjct: 340 FPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDAR 399

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
                M +     DVV+YNT+++GY + +K  EA  LF ++K  NI P++++Y T+I G 
Sbjct: 400 ELLSSMAAP----DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGL 455

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
                 + A R+ +EM S  + P+ +TYT LL G    G +    ++  EM+ + I P  
Sbjct: 456 CESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDG 515

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH------YGILIENFCKAEMYDR 355
            +   + +G + + G    A  + + M+      E  H      Y + I+  CK    ++
Sbjct: 516 YAYTTRTVG-ELRLGDSEKAFRLHEEMV-----AEDHHAPDLTIYNVRIDGLCKVGNLEK 569

Query: 356 AIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP- 414
           AI+   K+    + L P         +Y  +I+     G+   A   + +++ K  L P 
Sbjct: 570 AIEFQRKIFR--VGLVPDHV------TYTTVIRGYLEKGRFKMARDLYDEMLSKR-LSPS 620

Query: 415 -VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
            + +  LI GH+K G  + AF+    M +RGV  +   +  L+    + G   +A   L 
Sbjct: 621 VITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLC 680

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
            M E+G SP    +  ++    +  + +   ++ K M++K ++ +
Sbjct: 681 KMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPD 725



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 228/518 (44%), Gaps = 47/518 (9%)

Query: 36  SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           +E  L  F  + R G     R  ++ ++ +L     +N A+ +   M   G+      F 
Sbjct: 220 AEKCLLSFEKMIRKGFLPSVRNCNI-VLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFN 278

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            +++S  K G ++   KI+  MK+  +E S  +Y+ L     + G+   A+R+   M   
Sbjct: 279 TMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRS 338

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G   T +++N ++ G+      + A    ++M + GI     TYN  I     F ++D+A
Sbjct: 339 GFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDA 398

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
            +L + M      P V+SY T++ GY+ + +  +A  +FD++K+ ++ P+ VTY  L+ G
Sbjct: 399 RELLSSMAA----PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDG 454

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC++G +   Q++  EM  + I P D   +  LL    K+G+L+ A ++   M+R  I  
Sbjct: 455 LCESGNLEGAQRLKEEMTSQLIYP-DVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKP 513

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
           +   Y        +    ++A +L +++V ++                        H+  
Sbjct: 514 DGYAYTTRTVGELRLGDSEKAFRLHEEMVAED------------------------HHAP 549

Query: 396 TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
                            D   +N  I G  K GN + A E  + + R G+  D   Y  +
Sbjct: 550 -----------------DLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTV 592

Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
           I  YL KG    A+   D M+    SP+   +  ++    + GR++ A +    M ++GV
Sbjct: 593 IRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGV 652

Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           + N+     +L  +   G+++EA   +  M + G  PN
Sbjct: 653 RPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPN 690



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 141/322 (43%), Gaps = 37/322 (11%)

Query: 48  RAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIV 107
           +AG  N    T+  +I+ L   G L  A+ +  +M  + +  D   +  L++ + K G +
Sbjct: 437 KAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNL 496

Query: 108 QESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE-PTRHTYNV 166
             + +I+D M + G++    +Y       LR G    A R   +M++E    P    YNV
Sbjct: 497 SMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNV 556

Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
            + G      LE AI F   +   G+  D VTY T+I GY    +   A  L+ EM  K 
Sbjct: 557 RIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKR 616

Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
           + P+VI+Y  +I G+    R + A +   EMK   V+PN +T+ ALL G+C AG + E  
Sbjct: 617 LSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAY 676

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
           + L +M E  I P   S                                    Y ILI  
Sbjct: 677 RYLCKMEEEGISPNKYS------------------------------------YTILISK 700

Query: 347 FCKAEMYDRAIKLLDKLVEKEI 368
            C  + ++  +KL  ++++KEI
Sbjct: 701 HCDLDKWEEVVKLYKEMLDKEI 722



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 110/187 (58%)

Query: 90  DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
           D  ++ V I+   K G ++++++    + ++G+     +Y  + +  L +GR+ MA+  +
Sbjct: 550 DLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLY 609

Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
           ++MLS+ + P+  TY V++ G   + +LE A ++  +MK RG+  +V+T+N +++G  + 
Sbjct: 610 DEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKA 669

Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
             +DEA +   +M+E+ I P   SYT +I  +  +++ ++ ++++ EM   +++P+  T+
Sbjct: 670 GNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTH 729

Query: 270 TALLPGL 276
            AL   L
Sbjct: 730 RALFKHL 736


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 146/638 (22%), Positives = 271/638 (42%), Gaps = 53/638 (8%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           K  E A   +  + R G+   D  T   ++  L R G+ + A  +  +M K G   +   
Sbjct: 253 KGVEEAFDLYEGMVRNGVL-LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI+S  K G  +E + +   M   GV   + +Y AL   + ++G+    K      L
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S+ + P   TY V++     +  ++ A +   +M+ + IS +VVT++++ING+ +   +D
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA------- 266
           +A +    MKE+ I P V++Y T+I G+   +  D AL ++ +M    VK N        
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV 491

Query: 267 ----------------------------VTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
                                       V YT L+ GL  AG M    K  +E+++R + 
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D  V+   +   C  G    A   L  M  + +  +   Y  +I + C+     +A+K
Sbjct: 552 P-DAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFN 418
           LL ++          S++     +YN ++  L   G   KA+    +++  G   P +  
Sbjct: 611 LLHEM--------KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG-FSPSSLT 661

Query: 419 N--LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  +++  S+    D   +I + M   G+  D   Y  L++     G    A   L+ M+
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G +P +  F +++    +   +  A      M+ + +  N+     +L  L   G + 
Sbjct: 722 GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIG 781

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA   +  M +SG  PN   +D L +   ++   + A++L    +G+  +  +++Y  ++
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALI 841

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSS-DKLIAG 630
                AG    A   LFK M+K GV     + D L++G
Sbjct: 842 SDFTKAGMMTQAKE-LFKDMQKRGVHPTSCTYDILVSG 878



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 142/570 (24%), Positives = 237/570 (41%), Gaps = 36/570 (6%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI  Y + G    ++ + D M   G+   V  Y+ L     R G+   A+   + M 
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G++P   TY   +  +  +  +E A   +E M   G+ LDVVT + ++ G  R  +  
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  LF EM +    P  ++Y T+I       R  + L +  EM S  V  + VTYTAL+
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             L   GK  EV+  LR  +   + P +   +  L+   CK+ +++ A  VL  M   SI
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSP-NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ----STL----------DME 379
                 +  +I  F K  + D+A +   K + KE  + P      TL          D  
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEY--KRMMKERGINPNVVTYGTLIDGFFKFQGQDAA 468

Query: 380 ASSYNPM---------------IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRG 423
              Y+ M               +  L  NG+  +A   F+     G+ LD V +  LI G
Sbjct: 469 LEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDG 528

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K G+  +AF+  + +  R +  DA  Y   I      G+  +AK+ L  M   G  P 
Sbjct: 529 LFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPD 588

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
            S + +++ S    G    A +++  M    +K NL     ++  L   G VE+A   ++
Sbjct: 589 QSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLN 648

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M+ +G  P+      +L   S+  +    + + ++ +      D+  Y  +L  L   G
Sbjct: 649 EMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHG 708

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            T  A  +L +++  G   D  + + LI G
Sbjct: 709 MTRKATVVLEEMLGSGIAPDTITFNALILG 738



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 136/612 (22%), Positives = 263/612 (42%), Gaps = 48/612 (7%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R G+++ AR +L  M + GV  +   +   I  Y +   V+E+  +++ M + GV   V 
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +  AL   + R GR+  A   F +M   G  P   TY  ++     + + +  +    +M
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            SRG+ +D+VTY  +++   +  K DE +         N+ P  ++YT +I         
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV--- 304
           D+A ++  EM+   + PN VT+++++ G    G + +  +  R M ER I P   +    
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTL 455

Query: 305 ---FMKLLG----------VQC------------------KSGHLNAAADVLKAMIRLSI 333
              F K  G          + C                  ++G +  A  + K      +
Sbjct: 456 IDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGL 515

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +  +Y  LI+   KA     A K   +L+++ ++  P      +A  YN  I  LC  
Sbjct: 516 SLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML--P------DAVVYNVFINCLCML 567

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+  +A+ F  ++   G+  D   +N +I  H ++G    A +++  M    +  +   Y
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L+      G    AK  L+ M+  G SP+S   R V+++  +  R+     + + M+ 
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G+  ++ +   +L+ L   G   +A   ++ M+ SG  P+   F++L+    +      
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLI 628
           A       L ++   ++A++  +L  L + G+   A ++L + MEK G+  +  + D L 
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE-MEKSGLEPNNLTYDILA 806

Query: 629 AGLNQEGNTKQA 640
            G  ++ N  +A
Sbjct: 807 TGHGKQSNKVEA 818



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 114/502 (22%), Positives = 207/502 (41%), Gaps = 18/502 (3%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI-SLDVVTYNTMI 203
           A     +M   G+     T N +L G   + +++ A    +  +  GI +LDV+ +NT+I
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLI 176

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            GY R      A  +   M  + +   V+ Y T++ G+    + D A  + D MK   V 
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           PN  TYT  +   C    + E   +   MV   +   D      L+   C+ G  + A  
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV-LLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + + M ++        Y  LI++  KA      + LL ++V + ++        M+  +Y
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV--------MDLVTY 347

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMG 441
             ++  L   G+T + +   R  +    L P  V +  LI    K  N D A +++  M 
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDN-LSPNGVTYTVLIDALCKAHNVDEAEQVLLEME 406

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            + +  +   +  +I  ++++G    A      M E G +P    + ++++  F+     
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQD 466

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLL 558
            A  V   M+ +GVK N  +V  ++  L   G +EEA+        SG      N+ +L+
Sbjct: 467 AALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLI 526

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
             L + G    A K     + R+ + D   Y   ++ L   GK   A S L ++   G  
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLK 586

Query: 619 TDWKSSDKLIAGLNQEGNTKQA 640
            D  + + +I    ++G T +A
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKA 608



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 139/338 (41%), Gaps = 14/338 (4%)

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           S H +A A VL  M +  +P +      L+   C+    D A  L D         R   
Sbjct: 114 SDHAHAPA-VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD---------RGGG 163

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
              ++   +N +I   C  G T  A     ++  +G+ +D V +N L+ G  + G  D+A
Sbjct: 164 IHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAA 223

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             ++ +M   GV  +   Y   I  Y R     +A    + M+ +G         +++  
Sbjct: 224 RGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAG 283

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L  DGR   A  + + M + G   N      ++++L   G  +E L  +  M+  G V +
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              + +L+  L ++GKT      L F L  +   +  +Y  ++DAL  A     A  +L 
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           ++ EK    +  +   +I G  + G   +A    RM++
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 2/222 (0%)

Query: 40  LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIE 99
           L    W+  AGL + D   +  ++++L   G    A  +L +M   G+  D   F  LI 
Sbjct: 679 LDIHEWMMNAGL-HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 100 SYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
            + K   +  +   +  M    +  ++ +++ L   +   GR   A     +M   G+EP
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
              TY+++  G         A+R + +M  +G    V TYN +I+ + +   M +A++LF
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRI-FDEMKSF 260
            +M+++ + PT  +Y  ++ G+  + R   +    F E+  F
Sbjct: 858 KDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYFTEIYCF 899



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 118/274 (43%), Gaps = 10/274 (3%)

Query: 13  KIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           K+ ++ P    +N +   L G    E A      +  AG F+    TH ++++   +  +
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG-FSPSSLTHRRVLQACSQSRR 674

Query: 72  LNHARCILLD----MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           L+    ++LD    M   G+  D  ++  L++     G+ +++  + + M   G+     
Sbjct: 675 LD----VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +++AL     +      A   + +ML + I P   T+N +L G     ++  A     +M
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           +  G+  + +TY+ +  G+ +     EA +L+ EM  K   P V +Y  +I  +      
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
             A  +F +M+   V P + TY  L+ G  D  +
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAR 884


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/570 (22%), Positives = 246/570 (43%), Gaps = 47/570 (8%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  ++  Y + G V+ + ++      + V  +  +Y  + + +  RGR   A    ++M 
Sbjct: 87  YNAMVAGYCRVGQVEAARRL---AAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMT 143

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S    P    Y+V++     S    +A+R  E + ++G +LD    N +IN       +D
Sbjct: 144 SRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVD 203

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           E  ++  ++     E  ++SY  ++KG  A +R  D   + DE                 
Sbjct: 204 EGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDE----------------- 246

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
                   MV+V + L +M +    P D  ++  ++   CK GH   A ++L  M    +
Sbjct: 247 --------MVKVHEALSQMAQHGCTP-DIRMYATIIDGICKEGHHEVANEILSRMPSYGL 297

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  +++  C A+ +++A +LL ++ +K   L        +  ++N ++   C N
Sbjct: 298 KPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPL--------DDVTFNILVDFFCQN 349

Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G   +      Q+++ G + D + +  +I G  KEG  D A  ++K M   G   +  +Y
Sbjct: 350 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISY 409

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             +++         DA+  +  MI+ G  P    F +++  L + G V+ A  ++K M+ 
Sbjct: 410 TIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLV 469

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G   +L   + +++ L   G  EEAL  +++M+  G  PN   + S+   L+ +G+   
Sbjct: 470 NGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDK 529

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
            +++ D         D   Y  V+ +L    +T  A   L  ++  G + +  +   LI 
Sbjct: 530 VIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIK 589

Query: 630 GLNQEGNTKQA-DILS-----RMIRGEMSR 653
           GL  EG   +A D+LS     R +R  ++R
Sbjct: 590 GLASEGLLCEAQDLLSELCSRRAVRKHLTR 619



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 157/353 (44%), Gaps = 14/353 (3%)

Query: 79  LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
           L  M + G   D  M+  +I+   K+G  + + +I   M   G++ +V  Y+ + K I  
Sbjct: 254 LSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICS 313

Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
             R+  A+    +M  +       T+N+++  F  +  ++  I   E M   G   DV+T
Sbjct: 314 ADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVIT 373

Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
           Y T+ING+ +   +DEA  L   M     +P  ISYT ++KG  + ER  DA  +   M 
Sbjct: 374 YTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMI 433

Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQCKSG 316
                PN VT+  ++  LC  G + +  ++L++M+     P     S  +  LG   K+G
Sbjct: 434 QQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLG---KAG 490

Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
               A ++L  MI   I      Y  +     +    D+ I++ D + +        +T+
Sbjct: 491 KTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQD--------ATI 542

Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEG 428
             +A  YN +I  LC   +T  A  F   ++  G + +   +  LI+G + EG
Sbjct: 543 RSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEG 595



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 39/255 (15%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +L  M + G   D   +  +I  + K+G++ E+V +   M   G + +  SY  + K + 
Sbjct: 358 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLC 417

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK--LETAIRFFEDMKSRGISLD 195
              R++ A+   ++M+ +G  P   T+N ++   FL  K  +E AI   + M   G + D
Sbjct: 418 STERWVDAEELMSRMIQQGCLPNPVTFNTII--NFLCKKGLVEQAIELLKQMLVNGCNPD 475

Query: 196 VVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFD 255
           +++Y+T+I+G  +  K +EA +L   M  K I P VI+Y++M        R D  +++FD
Sbjct: 476 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFD 535

Query: 256 EMKSFDVK-----------------------------------PNAVTYTALLPGLCDAG 280
            ++   ++                                   PN  TYTAL+ GL   G
Sbjct: 536 NIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEG 595

Query: 281 KMVEVQKVLREMVER 295
            + E Q +L E+  R
Sbjct: 596 LLCEAQDLLSELCSR 610



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 1/167 (0%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + N L      E A++  + +   G  N D  ++  +I+ LG+ GK   A  +L  M 
Sbjct: 445 NTIINFLCKKGLVEQAIELLKQMLVNGC-NPDLISYSTVIDGLGKAGKTEEALELLNVMI 503

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            KG+  +   +  +  +  ++G + + +++FD ++   +      Y+A+   + +R    
Sbjct: 504 NKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETD 563

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
           +A  +   M+S G  P   TY  ++ G      L  A     ++ SR
Sbjct: 564 LAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 146/641 (22%), Positives = 273/641 (42%), Gaps = 53/641 (8%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           K  E A   +  + R G+   D  T   ++  L R G+ + A  +  +M K G   +   
Sbjct: 253 KGVEEAFDLYEGMVRNGVL-LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI+S  K G  +E + +   M   GV   + +Y AL   + ++G+    K      L
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S+ + P   TY V++     +  ++ A +   +M+ + IS +VVT++++ING+ +   +D
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA------- 266
           +A +    MKE+ I P V++Y T+I G+   +  D AL ++ +M    VK N        
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV 491

Query: 267 ----------------------------VTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
                                       V YT L+ GL  AG M    K  +E+++R + 
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D  V+   +   C  G    A   L  M  + +  +   Y  +I + C+     +A+K
Sbjct: 552 P-DAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFN 418
           LL ++          S++     +YN ++  L   G   KA+    +++  G   P +  
Sbjct: 611 LLHEM--------KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG-FSPSSLT 661

Query: 419 N--LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  +++  S+    D   +I + M   G+  D   Y  L++     G    A   L+ M+
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G +P +  F +++    +   +  A      M+ + +  N+     +L  L   G + 
Sbjct: 722 GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIG 781

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA   +  M +SG  PN   +D L +   ++   + A++L    +G+  +  +++Y  ++
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALI 841

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSS-DKLIAGLNQ 633
                AG    A   LFK M+K GV     + D L++G ++
Sbjct: 842 SDFTKAGMMTQAKE-LFKDMQKRGVHPTSCTYDILVSGWSR 881



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 159/690 (23%), Positives = 263/690 (38%), Gaps = 101/690 (14%)

Query: 51  LFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQ-- 108
           L    R T +    +L  +    HA  +L +M K+GV +D      L+    + G V   
Sbjct: 95  LLRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA 154

Query: 109 --------------------------------ESVKIFDIMKQLGVERSVKSYDALFKLI 136
                                            ++ + D M   G+   V  Y+ L    
Sbjct: 155 AALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214

Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
            R G+   A+   + M   G++P   TY   +  +  +  +E A   +E M   G+ LDV
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274

Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
           VT + ++ G  R  +  EA  LF EM +    P  ++Y T+I       R  + L +  E
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGE 334

Query: 257 MKSFDV-----------------------------------KPNAVTYTALLPGLCDAGK 281
           M S  V                                    PN VTYT L+  LC A  
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
           + E ++VL EM E+ I P +   F  ++    K G L+ A +  + M    I      YG
Sbjct: 395 VDEAEQVLLEMEEKSISP-NVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453

Query: 342 ILIENFCKAEMYDRAIK---------------LLDKLV---------EKEIIL---RPQS 374
            LI+ F K +  D A++               ++D LV         E+ + L      S
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
            L ++  +Y  +I  L   G    A  F ++LM + +L D V +N  I      G    A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
              +  M   G+  D   Y  +I S+ RKGE A A   L  M      P    + +++  
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---S 550
           LF  G V+ A  ++  MV  G   +     ++L+A      ++  L   + MM +G    
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 551 VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
           +  +++LL VL   G T  A  +L+  LG     D  ++  ++     +    NA++   
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +++ +    +  + + L+ GL   G   +A
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEA 783



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/273 (20%), Positives = 117/273 (42%), Gaps = 1/273 (0%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
              H  V      ++  +  L    W+  AGL + D   +  ++++L   G    A  +L
Sbjct: 659 SLTHRRVLQACSQSRRLDVILDIHEWMMNAGL-HADITVYNTLLQVLCYHGMTRKATVVL 717

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            +M   G+  D   F  LI  + K   +  +   +  M    +  ++ +++ L   +   
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           GR   A     +M   G+EP   TY+++  G         A+R + +M  +G    V TY
Sbjct: 778 GRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTY 837

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
           N +I+ + +   M +A++LF +M+++ + PT  +Y  ++ G+  +    +  +   +MK 
Sbjct: 838 NALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
               P+  T + +       G   + Q++L+ +
Sbjct: 898 KGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 129/297 (43%), Gaps = 10/297 (3%)

Query: 13  KIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           K+ ++ P    +N +   L G    E A      +  AG F+    TH ++++   +  +
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG-FSPSSLTHRRVLQACSQSRR 674

Query: 72  LNHARCILLD----MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           L+    ++LD    M   G+  D  ++  L++     G+ +++  + + M   G+     
Sbjct: 675 LD----VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +++AL     +      A   + +ML + I P   T+N +L G     ++  A     +M
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           +  G+  + +TY+ +  G+ +     EA +L+ EM  K   P V +Y  +I  +      
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
             A  +F +M+   V P + TY  L+ G        EV+K L++M E+   P   ++
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTL 907



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 156/391 (39%), Gaps = 54/391 (13%)

Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
           +P  V Y  LL  L D         VL EM +R +P  D      LL   C++G ++AAA
Sbjct: 100 RPTTVAYNILLAALSD---HAHAPAVLAEMCKRGVP-FDGVTVNTLLAGLCRNGQVDAAA 155

Query: 323 DVLKAMIRLSIP--TEAGHYGIL-IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            +      ++ P  + AG   +L I  F        A+ + D++  +         L M+
Sbjct: 156 ALADRAGGIT-PWMSSAGTLSLLDIAGFGDTPA---ALSVADRMTAQ--------GLPMD 203

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIV 437
              YN ++   C  GQ   A      +MK+  +DP    +   I  + +    + AF++ 
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVL-DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLY 262

Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
           + M R GV  D      L+    R G  ++A      M + G +P    + ++++SL + 
Sbjct: 263 EGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKA 322

Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSL 557
           GR +    ++  MV +GV   +DLV                               + +L
Sbjct: 323 GRGKELLSLLGEMVSRGVV--MDLV------------------------------TYTAL 350

Query: 558 LSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGG 617
           +  L ++GKT      L F L  +   +  +Y  ++DAL  A     A  +L ++ EK  
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 618 VTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
             +  +   +I G  + G   +A    RM++
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 146/641 (22%), Positives = 273/641 (42%), Gaps = 53/641 (8%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
           K  E A   +  + R G+   D  T   ++  L R G+ + A  +  +M K G   +   
Sbjct: 253 KGVEEAFDLYEGMVRNGVL-LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI+S  K G  +E + +   M   GV   + +Y AL   + ++G+    K      L
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
           S+ + P   TY V++     +  ++ A +   +M+ + IS +VVT++++ING+ +   +D
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA------- 266
           +A +    MKE+ I P V++Y T+I G+   +  D AL ++ +M    VK N        
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV 491

Query: 267 ----------------------------VTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
                                       V YT L+ GL  AG M    K  +E+++R + 
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
           P D  V+   +   C  G    A   L  M  + +  +   Y  +I + C+     +A+K
Sbjct: 552 P-DAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFN 418
           LL ++          S++     +YN ++  L   G   KA+    +++  G   P +  
Sbjct: 611 LLHEM--------KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG-FSPSSLT 661

Query: 419 N--LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +  +++  S+    D   +I + M   G+  D   Y  L++     G    A   L+ M+
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G +P +  F +++    +   +  A      M+ + +  N+     +L  L   G + 
Sbjct: 722 GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIG 781

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA   +  M +SG  PN   +D L +   ++   + A++L    +G+  +  +++Y  ++
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALI 841

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSS-DKLIAGLNQ 633
                AG    A   LFK M+K GV     + D L++G ++
Sbjct: 842 SDFTKAGMMTQAKE-LFKDMQKRGVHPTSCTYDILVSGWSR 881



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 142/570 (24%), Positives = 237/570 (41%), Gaps = 36/570 (6%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           +  LI  Y + G    ++ + D M   G+   V  Y+ L     R G+   A+   + M 
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G++P   TY   +  +  +  +E A   +E M   G+ LDVVT + ++ G  R  +  
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           EA  LF EM +    P  ++Y T+I       R  + L +  EM S  V  + VTYTAL+
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             L   GK  EV+  LR  +   + P +   +  L+   CK+ +++ A  VL  M   SI
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSP-NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ----STL----------DME 379
                 +  +I  F K  + D+A +   K + KE  + P      TL          D  
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEY--KRMMKERGINPNVVTYGTLIDGFFKFQGQDAA 468

Query: 380 ASSYNPM---------------IQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRG 423
              Y+ M               +  L  NG+  +A   F+     G+ LD V +  LI G
Sbjct: 469 LEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDG 528

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
             K G+  +AF+  + +  R +  DA  Y   I      G+  +AK+ L  M   G  P 
Sbjct: 529 LFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPD 588

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
            S + +++ S    G    A +++  M    +K NL     ++  L   G VE+A   ++
Sbjct: 589 QSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLN 648

Query: 544 LMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
            M+ +G  P+      +L   S+  +    + + ++ +      D+  Y  +L  L   G
Sbjct: 649 EMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHG 708

Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            T  A  +L +++  G   D  + + LI G
Sbjct: 709 MTRKATVVLEEMLGSGIAPDTITFNALILG 738



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 135/612 (22%), Positives = 262/612 (42%), Gaps = 48/612 (7%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           R G+++ AR +L  M + GV  +   +   I  Y +   V+E+  +++ M + GV   V 
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +  AL   + R GR+  A   F +M   G  P   TY  ++     + + +  +    +M
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
            SRG+ +D+VTY  +++   +  K DE +         N+ P  ++YT +I         
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV--- 304
           D+A ++  EM+   + PN VT+++++ G    G + +  +  R M ER I P   +    
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTL 455

Query: 305 ---FMKLLG----------VQC------------------KSGHLNAAADVLKAMIRLSI 333
              F K  G          + C                  ++G +  A  + K      +
Sbjct: 456 IDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGL 515

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +  +Y  LI+   KA     A K   +L+++ ++         +A  YN  I  LC  
Sbjct: 516 SLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML--------PDAVVYNVFINCLCML 567

Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
           G+  +A+ F  ++   G+  D   +N +I  H ++G    A +++  M    +  +   Y
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
             L+      G    AK  L+ M+  G SP+S   R V+++  +  R+     + + M+ 
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
            G+  ++ +   +L+ L   G   +A   ++ M+ SG  P+   F++L+    +      
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLI 628
           A       L ++   ++A++  +L  L + G+   A ++L + MEK G+  +  + D L 
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE-MEKSGLEPNNLTYDILA 806

Query: 629 AGLNQEGNTKQA 640
            G  ++ N  +A
Sbjct: 807 TGHGKQSNKVEA 818



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/502 (22%), Positives = 207/502 (41%), Gaps = 18/502 (3%)

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI-SLDVVTYNTMI 203
           A     +M   G+     T N +L G   + +++ A    +  +  GI +LDV+ +NT+I
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLI 176

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            GY R      A  +   M  + +   V+ Y T++ G+    + D A  + D MK   V 
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           PN  TYT  +   C    + E   +   MV   +   D      L+   C+ G  + A  
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV-LLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           + + M ++        Y  LI++  KA      + LL ++V + ++        M+  +Y
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV--------MDLVTY 347

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMG 441
             ++  L   G+T + +   R  +    L P  V +  LI    K  N D A +++  M 
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDN-LSPNGVTYTVLIDALCKAHNVDEAEQVLLEME 406

Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
            + +  +   +  +I  ++++G    A      M E G +P    + ++++  F+     
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQD 466

Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLL 558
            A  V   M+ +GVK N  +V  ++  L   G +EEA+        SG      N+ +L+
Sbjct: 467 AALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLI 526

Query: 559 SVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
             L + G    A K     + R+ + D   Y   ++ L   GK   A S L ++   G  
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLK 586

Query: 619 TDWKSSDKLIAGLNQEGNTKQA 640
            D  + + +I    ++G T +A
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKA 608



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 112/253 (44%), Gaps = 1/253 (0%)

Query: 40  LQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIE 99
           L    W+  AGL + D   +  ++++L   G    A  +L +M   G+  D   F  LI 
Sbjct: 679 LDIHEWMMNAGL-HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 100 SYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEP 159
            + K   +  +   +  M    +  ++ +++ L   +   GR   A     +M   G+EP
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 160 TRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLF 219
              TY+++  G         A+R + +M  +G    V TYN +I+ + +   M +A++LF
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857

Query: 220 AEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDA 279
            +M+++ + PT  +Y  ++ G+  +    +  +   +MK     P+  T + +       
Sbjct: 858 KDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKP 917

Query: 280 GKMVEVQKVLREM 292
           G   + Q++L+ +
Sbjct: 918 GMTWQAQRLLKNL 930



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 129/297 (43%), Gaps = 10/297 (3%)

Query: 13  KIRALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           K+ ++ P    +N +   L G    E A      +  AG F+    TH ++++   +  +
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG-FSPSSLTHRRVLQACSQSRR 674

Query: 72  LNHARCILLD----MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
           L+    ++LD    M   G+  D  ++  L++     G+ +++  + + M   G+     
Sbjct: 675 LD----VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
           +++AL     +      A   + +ML + I P   T+N +L G     ++  A     +M
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
           +  G+  + +TY+ +  G+ +     EA +L+ EM  K   P V +Y  +I  +      
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
             A  +F +M+   V P + TY  L+ G        EV+K L++M E+   P   ++
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTL 907



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 139/338 (41%), Gaps = 14/338 (4%)

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
           S H +A A VL  M +  +P +      L+   C+    D A  L D         R   
Sbjct: 114 SDHAHAPA-VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD---------RGGG 163

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
              ++   +N +I   C  G T  A     ++  +G+ +D V +N L+ G  + G  D+A
Sbjct: 164 IHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAA 223

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
             ++ +M   GV  +   Y   I  Y R     +A    + M+ +G         +++  
Sbjct: 224 RGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAG 283

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L  DGR   A  + + M + G   N      ++++L   G  +E L  +  M+  G V +
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              + +L+  L ++GKT      L F L  +   +  +Y  ++DAL  A     A  +L 
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
           ++ EK    +  +   +I G  + G   +A    RM++
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 154/662 (23%), Positives = 283/662 (42%), Gaps = 105/662 (15%)

Query: 34  KNSEHALQFFRWVERAGLFNHDRETHLK------MIEILGRVGKLNHARCILLDMPKKGV 87
           K  + A+  F WV        D E+ L       +I +LG+ GK++ A  IL ++ K G 
Sbjct: 158 KKCDMAMSVFSWVRE----REDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGF 213

Query: 88  QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL------------ 135
             D   +  LI +Y   G  +++V +F  M++ G + ++ +Y+ +  +            
Sbjct: 214 DLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKIS 273

Query: 136 -----------------------ILRRGR-YMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
                                    RRG  Y  A + F +M   G  P + T+N +L  +
Sbjct: 274 GLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVY 333

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             S + + A+   ++M+  G S  +VTYN++I+ Y R   + EA +L  +M EK I+P V
Sbjct: 334 GKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDV 393

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +YTT++ G+      + A+RIF EM++   KPN  T+ AL+    + G+  E+ KV  E
Sbjct: 394 FTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEE 453

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           +      P D   +  LL V  ++G  +  + V K M R     E   +  LI  + +  
Sbjct: 454 IEICNCAP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 512

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
            + +A+ +  +++E  +      T D+  SSYN ++  L   G   ++E  F + MK G 
Sbjct: 513 SFQQAMAVYKRMLEAGV------TPDL--SSYNAVLAALARGGLWEQSEKVFAE-MKDGR 563

Query: 412 LDP--VAFNNLIRGHSK-------------------EGNP-------------------D 431
             P  + + +L+  ++                    E  P                   +
Sbjct: 564 CKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETE 623

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            AFE +K   ++G P D      +I  Y R+   A A   L+ M E G SP+ + + S+M
Sbjct: 624 HAFEELK---KKGSP-DLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLM 679

Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
                    + +  V+K ++ KG+K +L     ++ A    G +++A      M   G V
Sbjct: 680 YMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLV 739

Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
           P+   +++ ++  +       A+ ++ + +   C  +  +Y  ++D      +  +A  I
Sbjct: 740 PDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADA--I 797

Query: 609 LF 610
           +F
Sbjct: 798 MF 799



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/488 (20%), Positives = 215/488 (44%), Gaps = 47/488 (9%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N + +V   ++  + A++  + +E +G F+    T+  +I    R G L  A  +   M 
Sbjct: 327 NTLLDVYGKSRRPKEAMEVLKEMEFSG-FSPSIVTYNSLISAYARDGLLREAMELKDQMV 385

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
           +KG++ D   +  L+  + K G+ + +++IF  M+  G + ++ +++AL K+   RGR+ 
Sbjct: 386 EKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFA 445

Query: 144 MAKRYF------------------------NKMLSE-----------GIEPTRHTYNVML 168
              + F                        N M SE           G  P R T+N ++
Sbjct: 446 EMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI 505

Query: 169 WGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIE 228
             +      + A+  ++ M   G++ D+ +YN ++    R    +++EK+FAEMK+   +
Sbjct: 506 SAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCK 565

Query: 229 PTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
           P  ++Y +++  Y   +  +    + +E+ S   +P  V    L+        ++E +  
Sbjct: 566 PNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHA 625

Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
             E+ ++  P  D S    ++ +  +   +  A ++L  M           Y  L+    
Sbjct: 626 FEELKKKGSP--DLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHS 683

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           ++E ++R+ ++L +++ K   L+P      +  SYN +I   C NG+   A   F  +  
Sbjct: 684 RSENFERSEEVLKEILAKG--LKP------DLISYNTVIFAYCRNGRMKDASRIFSYMKT 735

Query: 409 KG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
            G V D + +N  +  ++ +   + A  +V+ M + G  R+ + Y  +++ Y +    AD
Sbjct: 736 YGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRAD 795

Query: 468 AKTALDSM 475
           A   + S+
Sbjct: 796 AIMFVSSL 803



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 63  IEILGRVGKLNHARCILL--------DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           + +L +   L +++C LL        ++ KKG   D      +I  YG++ +V ++ +I 
Sbjct: 602 VPVLLKTLVLVNSKCDLLMETEHAFEELKKKGSP-DLSTLNAMIAIYGRRQMVAKANEIL 660

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           + M + G   S+ +Y++L  +  R   +  ++    ++L++G++P   +YN +++ +  +
Sbjct: 661 NFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRN 720

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            +++ A R F  MK+ G+  DV+TYNT +  Y      ++A  +   M +   +    +Y
Sbjct: 721 GRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTY 780

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFD 261
            +++ GY    R  DA+     +   D
Sbjct: 781 NSIVDGYCKHSRRADAIMFVSSLNQLD 807



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 95/480 (19%), Positives = 185/480 (38%), Gaps = 69/480 (14%)

Query: 182 RFFEDMKSRGISLDVVTYNTM-------INGYNRFKKMDEAEKLFAEMKEKNIEPTVI-- 232
           + FE      +SL   T+N++       I G   +KK D A  +F+ ++E+    +V+  
Sbjct: 123 QLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNC 182

Query: 233 SYTTMIKGYVAVE-RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
           S   +I   +  E +   A  I + ++      +   YT+L+      G+  +   V ++
Sbjct: 183 SVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKK 242

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSG-HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
           M E    P   + +  +L V  K G   +  + ++  M    +  +   Y  LI    + 
Sbjct: 243 MEEEGCKPTLIT-YNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRG 301

Query: 351 EMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG 410
            +Y+ A ++ +               +M+ S ++P                         
Sbjct: 302 SLYEEAAQVFE---------------EMKLSGFSP------------------------- 321

Query: 411 VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
             D V FN L+  + K   P  A E++K M   G       Y  LI +Y R G   +A  
Sbjct: 322 --DKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAME 379

Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
             D M+E G  P    + +++    + G  + A R+   M   G K N+     +++   
Sbjct: 380 LKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHG 439

Query: 531 MRGHVEEALG---RIDLMMQSGSVPNFDSLLSVLSEKG------KTIAAVKLLDFCLGRD 581
            RG   E +     I++   +  +  +++LL+V  + G           +K   F   RD
Sbjct: 440 NRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERD 499

Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
                 ++  ++ A    G    A ++  +++E G   D  S + ++A L + G  +Q++
Sbjct: 500 ------TFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSE 553


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 198/470 (42%), Gaps = 49/470 (10%)

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
           ++G ++E++++ + M  L    +     AL K +   GR   A+R          EP   
Sbjct: 71  RRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AACEPDVM 125

Query: 163 TYNVMLWGFFLSLKLETAIRF--------------------------------FEDMKSR 190
            YN M+ G+ ++ +L+ A R                                  +DM  R
Sbjct: 126 AYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRR 185

Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
           G   DVVTY  ++    +     +A KL  EM+ K   P +I+Y  ++ G     R DDA
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDA 245

Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
           +     + S   +PN V+Y  +L GLC A +  + +K++ EM ++  PP +   F  L+ 
Sbjct: 246 IEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP-NVVTFNMLIS 304

Query: 311 VQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
             C+ G +  A +VL  + +      +  Y  ++  FCK +  DRA+  ++ +V +    
Sbjct: 305 FLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCY- 363

Query: 371 RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEG 428
                   +  SYN ++  LC  G+   A     QL  KG   PV  ++N +I G +K G
Sbjct: 364 -------PDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC-TPVLISYNTVIDGLTKAG 415

Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
               A E++  M  +G+  D   Y  +     R+    +A  A   + + G  P + L+ 
Sbjct: 416 KTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYN 475

Query: 489 SVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           +++  L +      A  +   M+  G   N      ++E L   G V+EA
Sbjct: 476 AILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEA 525



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 204/429 (47%), Gaps = 16/429 (3%)

Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           DV+ YN M+ GY    ++D A +L A+M    +EP   +Y T+I+G     R  +AL + 
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVL 179

Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
           D+M      P+ VTYT LL   C      +  K+L EM  +   P   +  + + G+ C+
Sbjct: 180 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGI-CQ 238

Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
            G ++ A + LK++           Y I+++  C AE ++ A KL+ ++ +K     P +
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGY---PPN 295

Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSA 433
            +     ++N +I  LC  G    A     Q+ K G   + +++N ++    K+   D A
Sbjct: 296 VV-----TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA 350

Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
              V++M  RG   D  +Y  L+ +  R GE   A   L  + + G +P    + +V++ 
Sbjct: 351 MAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDG 410

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
           L + G+ + A  ++  MV KG++ ++   + I   L     +EEA+     +   G  PN
Sbjct: 411 LTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPN 470

Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
              ++++L  L ++ +T  A+ L  + +   C+ + ++Y  +++ L   G    A  +L 
Sbjct: 471 TVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLG 530

Query: 611 KIMEKGGVT 619
           ++  +G V+
Sbjct: 531 ELCSRGVVS 539



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 186/412 (45%), Gaps = 13/412 (3%)

Query: 69  VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
            G+L+ AR ++ DMP   ++ D   +  LI     +G    ++ + D M + G    V +
Sbjct: 137 TGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVT 193

Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
           Y  L +   +R  Y  A +  ++M ++G  P   TYNV++ G     +++ AI F + + 
Sbjct: 194 YTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLP 253

Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
           S G   + V+YN ++ G    ++ ++AEKL AEM +K   P V+++  +I         +
Sbjct: 254 SHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVE 313

Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
            A+ + D++  +   PN+++Y  +L   C   KM      +  MV R   P D   +  L
Sbjct: 314 PAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYP-DIVSYNTL 372

Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
           L   C+ G ++AA ++L  +           Y  +I+   KA     A++LL+++V K  
Sbjct: 373 LTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTK-- 430

Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
                  L  +  +Y+ +   LC   +  +A   F ++   G+  + V +N ++ G  K 
Sbjct: 431 ------GLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKR 484

Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
               +A ++   M   G   +   Y  LIE    +G   +A+  L  +   G
Sbjct: 485 RETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 185/392 (47%), Gaps = 10/392 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T+  +I  L   G+  +A  +L DM ++G   D   + +L+E+  K+   ++++K+ 
Sbjct: 155 DSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLL 214

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
           D M+  G    + +Y+ +   I + GR   A  +   + S G EP   +YN++L G   +
Sbjct: 215 DEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA 274

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + E A +   +M  +G   +VVT+N +I+   R   ++ A ++  ++ +    P  +SY
Sbjct: 275 ERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSY 334

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++  +   ++ D A+   + M S    P+ V+Y  LL  LC  G++    ++L ++ +
Sbjct: 335 NPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 394

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           +   P   S    + G+  K+G    A ++L  M+   +  +   Y  +    C+ +  +
Sbjct: 395 KGCTPVLISYNTVIDGLT-KAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIE 453

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
            AI+   K+  +++ +RP + L      YN ++  LC   +T  A   F  ++  G + +
Sbjct: 454 EAIRAFCKV--QDMGIRPNTVL------YNAILLGLCKRRETHNAIDLFIYMISNGCMPN 505

Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
              +  LI G + EG    A E++  +  RGV
Sbjct: 506 ESTYTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 23  HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
           +N+V N +      + A++F + +   G   +    ++ +++ L    +   A  ++ +M
Sbjct: 229 YNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI-VLKGLCTAERWEDAEKLMAEM 287

Query: 83  PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
            +KG   +   F +LI    ++G+V+ ++++ D + + G   +  SY+ +     ++ + 
Sbjct: 288 SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKM 347

Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
             A  +   M+S G  P   +YN +L       +++ A+     +K +G +  +++YNT+
Sbjct: 348 DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 407

Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
           I+G  +  K  EA +L  EM  K ++P +I+Y+T+  G    +R ++A+R F +++   +
Sbjct: 408 IDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGI 467

Query: 263 KPNAVTYTALLPGLC 277
           +PN V Y A+L GLC
Sbjct: 468 RPNTVLYNAILLGLC 482



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 178/407 (43%), Gaps = 21/407 (5%)

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           ++G V     ++ALR+ + M   +         AL+  LC +G+  E ++VL        
Sbjct: 66  LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAAC----- 120

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
              D   +  ++   C +G L+AA  ++  M    +  ++  Y  LI   C       A+
Sbjct: 121 -EPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNAL 176

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
            +LD ++ +  +         +  +Y  +++  C      +A     ++  KG   D + 
Sbjct: 177 VVLDDMLRRGCV--------PDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIIT 228

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N ++ G  +EG  D A E +K +   G   +  +Y  +++         DA+  +  M 
Sbjct: 229 YNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 288

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
           + G+ P    F  ++  L   G V+ A  V+  + + G   N      IL A   +  ++
Sbjct: 289 QKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMD 348

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
            A+  ++LM+  G  P+   +++LL+ L   G+  AAV+LL     + C   L SY  V+
Sbjct: 349 RAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVI 408

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D L  AGKT  A  +L +++ KG   D  +   + +GL +E   ++A
Sbjct: 409 DGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEA 455


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 210/491 (42%), Gaps = 30/491 (6%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL  F  +   G F  D  T+  +I  L +VG  + A  +L  M +K  Q +   +  +I
Sbjct: 150 ALHLFDKMIGEG-FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +S  K   V E+  +F  M   G+   + +Y++L   +     +       N+M+   I 
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   ++N ++       K+  A    + M  RG+  +VVTY  +++G+    +MDEA K+
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVER-------------------ADDALRIFDEMKS 259
           F  M  K   P VISY T+I GY  ++R                    D+A+++FD M  
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVC 388

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
               PN ++Y  L+ G C   ++ +   +  EM  + + P D   +  L+   C    L 
Sbjct: 389 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP-DTVTYSTLIHGLCHVERLQ 447

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  +   M+  S       Y IL++  CK      A+ LL K +E        S LD +
Sbjct: 448 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL-KAIEG-------SNLDPD 499

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVK 438
               N  I  +C  G+   A   F  L  KG+   V  ++ +I G  + G  D A ++ +
Sbjct: 500 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 559

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
            M   G   +   Y  +   +LR  E + A   L  M+  G S  +S     ++ L +DG
Sbjct: 560 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619

Query: 499 RVQTASRVMKS 509
             Q+  +++++
Sbjct: 620 LDQSLKQILRN 630



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 133/605 (21%), Positives = 242/605 (40%), Gaps = 41/605 (6%)

Query: 54  HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           H +  H   I+  G +   N  R + +  P   V +++     L+ S  K       + +
Sbjct: 33  HSKSLHFNTID--GAISSFN--RMLRMQPPPSTVDFNK-----LLTSIAKMKHHSTLLSL 83

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
              M   G+  ++ +   L        R   A     K+L  G +P   T+  ++ G  +
Sbjct: 84  SHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICV 143

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
             K+  A+  F+ M   G   DVVTY T+ING  +      A +L   M +KN +P V +
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203

Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
           Y T+I       +  +A  +F EM +  + P+  TY +L+  LC+  +   V  +L EMV
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
           +  I P D   F  ++   CK G +  A DV+  MI+  +      Y  L++  C     
Sbjct: 264 DSKIMP-DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA-------------- 399
           D A+K+ D +V K  +  P         SYN +I   C   +  KA              
Sbjct: 323 DEAVKVFDTMVCKGCM--PN------VISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYL 374

Query: 400 ------EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
                 ++F   + K  + + +++N LI G+ K    D A  +   M R+ +  D   Y 
Sbjct: 375 NMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYS 434

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI          DA      M+     P    +R +++ L ++  +  A  ++K++   
Sbjct: 435 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 494

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
            +  ++ +    ++ +   G +E A      +   G  P+   +  +++ L  +G    A
Sbjct: 495 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 554

Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
            KL        C ++   Y  +    L   +T  A  +L +++ +G   D  +    +  
Sbjct: 555 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 614

Query: 631 LNQEG 635
           L+ +G
Sbjct: 615 LSDDG 619



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 111/521 (21%), Positives = 218/521 (41%), Gaps = 34/521 (6%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML     P+   +N +L          T +     M S GI  ++ T + +IN +  
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++  A  + A++ +   +P   ++TT+I+G     +  +AL +FD+M     +P+ VT
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVT 168

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ GLC  G      ++L  MV++   P +   +  ++   CK   +  A ++   M
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQP-NVFAYNTIIDSLCKDRQVTEAFNLFSEM 227

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
           +   I  +   Y  LI   C    +     LL+++V+ +I+  P      +  S+N ++ 
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM--P------DVVSFNTVVD 279

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
            LC  G+  +A     +++++GV +P  V +  L+ GH      D A ++   M  +G  
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGV-EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 447 RDADAYICLIESY--LRKGEPA-----------------DAKTALDSMIEDGHSPASSLF 487
            +  +Y  LI  Y  +++ + A                 +A    D+M+  G  P    +
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISY 398

Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
            +++    +  R+  A  +   M  + +  +    + ++  L     +++A+     M+ 
Sbjct: 399 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 458

Query: 548 SGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
              +PN  +   LL  L +      A+ LL    G +   D+      +D +  AG+   
Sbjct: 459 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 518

Query: 605 AYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
           A  +   +  KG   D  +   +I GL + G   +A  L R
Sbjct: 519 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 559


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 202/436 (46%), Gaps = 37/436 (8%)

Query: 68  RVGKLNHARCILLDMPKKGVQWDEDM-FEVLIESYGKKGIVQESVKIFDIMKQLGVERSV 126
           ++G ++    +L DM  +G + +  +   V++    K G + E++ +F+ MK  G+   +
Sbjct: 381 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 440

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
            +Y  +   + + G++ MA   +++M  + I P   T+  +L G      L  A    + 
Sbjct: 441 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 500

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           + S G +LD+V YN +I+GY +   ++EA +LF  + E  I P+V ++ ++I GY   + 
Sbjct: 501 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 560

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD----- 301
             +A +I D +K + + P+ V+YT L+    + G    + ++ REM    IPP +     
Sbjct: 561 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 620

Query: 302 --------------NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
                         N V  + +  +CK G        L+ M    IP +   Y  +I+  
Sbjct: 621 IFKGLCRGWKHENCNHVLRERIFEKCKQG--------LRDMESEGIPPDQITYNTIIQYL 672

Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
           C+ +    A   L+       I++ ++ LD  +++YN +I  LC  G   KA+ F   L 
Sbjct: 673 CRVKHLSGAFVFLE-------IMKSRN-LDASSATYNILIDSLCVYGYIRKADSFIYSLQ 724

Query: 408 KKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
           ++ V L   A+  LI+ H  +G+P+ A ++   +  RG       Y  +I    R+    
Sbjct: 725 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVN 784

Query: 467 DAKTALDSMIEDGHSP 482
           ++K     M+  G SP
Sbjct: 785 ESKFFFCLMLSQGISP 800



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 143/671 (21%), Positives = 287/671 (42%), Gaps = 89/671 (13%)

Query: 15  RALVPQFDHNLVYNVLHG--AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
           R LV +  H  V  ++    +++S+ ++ FF+ +     F H   + L +  +L    + 
Sbjct: 75  RGLVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRF 134

Query: 73  NHARCILLDM-PKKGV----------QWDED--MFEVLIESYGKKGIVQESVKIFDIMKQ 119
              + IL  +  ++G           +W+    ++++L+    +  +V +S+ I   MK 
Sbjct: 135 KELQVILEQLLQEEGTLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKD 194

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS---EGIEPTRHTYNVMLWGFFLSLK 176
             +  S +SY+++          +   R  +KM     E  +   HTY+ ++ G     K
Sbjct: 195 QNLNVSTQSYNSV----------LYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQK 244

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           LE A+ F    + + I   VV++N++++GY +   +D A+  F  + +  + P+V S+  
Sbjct: 245 LEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 304

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G   V    +AL +  +M    V+P++VTY  L  G    G +    +V+R+M+++ 
Sbjct: 305 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 364

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM--------------IRLSIPTEAGH--- 339
           + P D   +  LL  QC+ G+++    +LK M              + LS   + G    
Sbjct: 365 LSP-DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 423

Query: 340 -------------------YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
                              Y I+I   CK   +D A+ L D++ +K I+  P S      
Sbjct: 424 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL--PNS------ 475

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
            ++  ++  LC  G   +A      L+  G  LD V +N +I G++K G  + A E+ K+
Sbjct: 476 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 535

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           +   G+      +  LI  Y +    A+A+  LD +   G +P+   + ++M++    G 
Sbjct: 536 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 595

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEAL-----------LMRGHVEEALGRIDLMMQS 548
            ++   + + M  +G+       + I + L           ++R  + E   +    M+S
Sbjct: 596 TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 655

Query: 549 GSVP----NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
             +P     +++++  L        A   L+    R+     A+Y  ++D+L   G    
Sbjct: 656 EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 715

Query: 605 AYSILFKIMEK 615
           A S ++ + E+
Sbjct: 716 ADSFIYSLQEQ 726



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 111/519 (21%), Positives = 208/519 (40%), Gaps = 39/519 (7%)

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS----RGISLDV 196
           R  +   +F  ++SE     RH +   +    +S   + ++ FF++++     R  S   
Sbjct: 66  REFLHGYHFRGLVSE----LRHVHVEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFST 121

Query: 197 VTYNTMINGYNRFKKMD-------EAEKLFAEMKEKNI---EPTVISYTTMIKGYVAVER 246
           +  + ++ G  RFK++        + E    E+   +    E T + +  ++     +  
Sbjct: 122 LLVSHVLAGQRRFKELQVILEQLLQEEGTLCELLSNSFRKWESTGLVWDMLLFLSSRLRM 181

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
            DD+L I  +MK  ++  +  +Y ++L    +  KM +V K +++        K+   + 
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD--------KNEHTYS 233

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            ++   C+   L  A   L+      I      +  ++  +CK    D A      +++ 
Sbjct: 234 TVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC 293

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHS 425
            ++  P         S+N +I  LC  G   +A      + K GV  D V +N L +G  
Sbjct: 294 GLV--PS------VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 345

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
             G    A+E+++ M  +G+  D   Y  L+    + G        L  M+  G    S 
Sbjct: 346 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 405

Query: 486 LFRSVMES-LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
           +  SVM S L + GR+  A  +   M   G+  +L   + ++  L   G  + AL   D 
Sbjct: 406 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 465

Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
           M     +PN     +LL  L +KG  + A  LLD  +     +D+  Y  V+D    +G 
Sbjct: 466 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 525

Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
              A  +   ++E G      + + LI G  +  N  +A
Sbjct: 526 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 564



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 1/149 (0%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           Q  +N +   L   K+   A  F   ++   L +    T+  +I+ L   G +  A   +
Sbjct: 662 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL-DASSATYNILIDSLCVYGYIRKADSFI 720

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
             + ++ V   +  +  LI+++  KG  + +VK+F  +   G   S++ Y A+   + RR
Sbjct: 721 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 780

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVML 168
                +K +F  MLS+GI P      VM+
Sbjct: 781 HLVNESKFFFCLMLSQGISPDLDICEVMI 809


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 180/408 (44%), Gaps = 46/408 (11%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
            +  +I+ L + G ++  + + L+M  +G+  D   +  +I      G  + +  +F+ M
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEM 299

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
              GV  +V +++ L   + + G+   A      M+  G  P   TYN ++ GF L  ++
Sbjct: 300 VDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRI 359

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A   F  M+S+GI  D V+YN +INGY +  +M EA+KL+ EM  K I PTVI+Y T+
Sbjct: 360 DDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTL 419

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
           + G     +  DA  +F EMK  D+ P + TY  LL GL                     
Sbjct: 420 LTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGL--------------------- 458

Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
                          CK+ HL+ A ++   +           +  LI+  CKA   + A 
Sbjct: 459 ---------------CKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
           +L ++L            L+    +Y  MI  LC +GQ   A+  F  + +KG   + V 
Sbjct: 504 ELFNRL--------SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVT 555

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
           FN L+RG  +        E+++ M  +    DA   I ++   L K E
Sbjct: 556 FNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAST-ISIVVDLLSKDE 602



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 208/478 (43%), Gaps = 35/478 (7%)

Query: 86  GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
           G+  D     +LI  Y     V   + +   M + G   +  ++ +L K +    R   A
Sbjct: 122 GLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEA 181

Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR----GISL--DVVTY 199
                KM+  G  P   TY  +L G  ++     A++  E+M +     G+++  ++V Y
Sbjct: 182 TGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCY 241

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            T+I+   +   +D+ ++LF EMK + I P V++Y+++I G     R + A  +F+EM  
Sbjct: 242 CTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVD 301

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             V PN VT+  L+  LC AGKM E   +L+ M++R   P D   +  L+   C  G ++
Sbjct: 302 EGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESP-DTFTYNTLIDGFCLEGRID 360

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI----------- 368
            A D+  +M    I T+A  Y +LI  +CK+     A KL  +++ KEI           
Sbjct: 361 DARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLL 420

Query: 369 --ILRPQSTLDM--------------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
             + R     D               E+ +YN ++  LC N    +A   F  L      
Sbjct: 421 TGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQ 480

Query: 413 DPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
             +  FN LI G  K    + A E+   +   G+  +   Y  +I    + G+  +AK  
Sbjct: 481 PSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDL 540

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
              M E G +P    F ++M    ++  +Q    +++ M EK    +   ++ +++ L
Sbjct: 541 FLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLL 598



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/494 (22%), Positives = 210/494 (42%), Gaps = 17/494 (3%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN ++     P   ++N +L       +    I  ++ M   G++ D +T N +IN Y  
Sbjct: 80  FNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCN 139

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             K+D    +  EM  +   P  +++T+++KG     R  +A  +  +M     +PN VT
Sbjct: 140 LNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVT 199

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERY----IPPKDNSV-FMKLLGVQCKSGHLNAAAD 323
           Y  LL GLC  G  +   K+  EM+       +  K N V +  ++   CK G ++   +
Sbjct: 200 YGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKE 259

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
           +   M    I  +   Y  +I   C    ++ A  L +++V++ +   P         ++
Sbjct: 260 LFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGV--HPN------VVTF 311

Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
           N +I  LC  G+  +A    + ++++G   D   +N LI G   EG  D A ++   M  
Sbjct: 312 NVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMES 371

Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           +G+  DA +Y  LI  Y + G   +AK     M+     P    + +++  LF +G+V+ 
Sbjct: 372 KGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRD 431

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
           A  +   M    +         +L+ L    H+ EA+     +      P+   F+ L+ 
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLID 491

Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            L +  K   A +L +         ++ +Y  ++  L  +G+  NA  +   + EKG   
Sbjct: 492 GLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAP 551

Query: 620 DWKSSDKLIAGLNQ 633
           +  + + L+ G  Q
Sbjct: 552 NLVTFNTLMRGFCQ 565



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 116/554 (20%), Positives = 234/554 (42%), Gaps = 56/554 (10%)

Query: 90  DEDMFEVLIESYGKKGIVQ--ESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
           D    E  ++S  K G ++  E+  +F+ +  +     + S++ L   + +  RY     
Sbjct: 54  DRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVIS 113

Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
            + +M   G+ P   T N+++  +    K++  +    +M  RG S + VT+ +++ G  
Sbjct: 114 LYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLC 173

Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY-------VAVERADDALR-------- 252
              ++ EA  L  +M      P V++Y T++ G        +AV+  ++ L         
Sbjct: 174 LGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVT 233

Query: 253 --------------------------IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
                                     +F EMK   + P+ V Y++++ G+C  G+    +
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
            +  EMV+  + P +   F  L+   CK+G +  A  +LK MI+     +   Y  LI+ 
Sbjct: 294 GLFNEMVDEGVHP-NVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDG 352

Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
           FC     D A  L   +  K I        + +A SYN +I   C +G+  +A+  +R++
Sbjct: 353 FCLEGRIDDARDLFVSMESKGI--------ETDAVSYNVLINGYCKSGRMVEAKKLYREM 404

Query: 407 MKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
           M K ++  V  +N L+ G  +EG    A+ +   M    +  ++  Y  L++   +    
Sbjct: 405 MCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHL 464

Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
           ++A      +      P+  +F  +++ L +  +++ A  +   +  +G++ N+     +
Sbjct: 465 SEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVM 524

Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
           +  L   G +E A      M + G  PN   F++L+    +  +    V+LL     +D 
Sbjct: 525 IHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDF 584

Query: 583 IIDLASYEKVLDAL 596
             D ++   V+D L
Sbjct: 585 SPDASTISIVVDLL 598



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 209/465 (44%), Gaps = 18/465 (3%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +++ L    +++ A  +L  M + G + +   +  L+      G    +VK+ + M
Sbjct: 164 TFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEM 223

Query: 118 KQ------LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
                   + ++ ++  Y  +   + + G     K  F +M   GI P    Y+ ++ G 
Sbjct: 224 LNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGM 283

Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
             + + E A   F +M   G+  +VVT+N +I+   +  KM+EA  L   M ++   P  
Sbjct: 284 CHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDT 343

Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
            +Y T+I G+    R DDA  +F  M+S  ++ +AV+Y  L+ G C +G+MVE +K+ RE
Sbjct: 344 FTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYRE 403

Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
           M+ + I P   +    L G+  + G +  A ++   M    +  E+  Y IL++  CK  
Sbjct: 404 MMCKEIMPTVITYNTLLTGLF-REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNN 462

Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
               A++L   L   +     Q ++ +    +N +I  LC   +   A   F +L  +G 
Sbjct: 463 HLSEAMELFHYLENHDF----QPSIQI----FNCLIDGLCKARKIEIARELFNRLSHEG- 513

Query: 412 LDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
           L+P  + +  +I G  K G  ++A ++   M  +G   +   +  L+  + +  E     
Sbjct: 514 LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVV 573

Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
             L  M E   SP +S    V++ L +D + +    ++ +   +G
Sbjct: 574 ELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 139/304 (45%), Gaps = 43/304 (14%)

Query: 44  RWVERAGLFNH--DRETHLK------MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
           RW    GLFN   D   H        +I+ L + GK+  A  +L  M ++G   D   + 
Sbjct: 288 RWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYN 347

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI+ +  +G + ++  +F  M+  G+E    SY+ L     + GR + AK+ + +M+ +
Sbjct: 348 TLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCK 407

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN--------------- 200
            I PT  TYN +L G F   K+  A   F +MK   ++ +  TYN               
Sbjct: 408 EIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEA 467

Query: 201 --------------------TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
                                +I+G  + +K++ A +LF  +  + +EP VI+YT MI G
Sbjct: 468 MELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHG 527

Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
                + ++A  +F  M+     PN VT+  L+ G C   +M +V ++L+EM E+   P 
Sbjct: 528 LCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPD 587

Query: 301 DNSV 304
            +++
Sbjct: 588 ASTI 591



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 105/476 (22%), Positives = 202/476 (42%), Gaps = 19/476 (3%)

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
           +K   A   F  +     +  + ++NT++    + K+  +   L+  M    + P  I+ 
Sbjct: 71  IKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITL 130

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             +I  Y  + + D  L +  EM      PN VT+T+L+ GLC   ++ E   +LR+MV 
Sbjct: 131 NILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVR 190

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR------LSIPTEAGHYGILIENFC 348
               P +   +  LL   C +G+   A  + + M+       ++I      Y  +I++ C
Sbjct: 191 MGYRP-NVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLC 249

Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
           K  + D+  +L  ++  + I          +  +Y+ +I  +CH G+   A+  F +++ 
Sbjct: 250 KDGLIDKGKELFLEMKGRGI--------SPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVD 301

Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
           +GV  + V FN LI    K G  + A  ++K+M +RG   D   Y  LI+ +  +G   D
Sbjct: 302 EGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDD 361

Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
           A+    SM   G    +  +  ++    + GR+  A ++ + M+ K +   +     +L 
Sbjct: 362 ARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLT 421

Query: 528 ALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
            L   G V +A      M      P    ++ LL  L +      A++L  +    D   
Sbjct: 422 GLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP 481

Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
            +  +  ++D L  A K   A  +  ++  +G   +  +   +I GL + G  + A
Sbjct: 482 SIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENA 537


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 226/475 (47%), Gaps = 39/475 (8%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M   G   + VT+N ++NG+++  +  + E+L   M  + I+P V+SY  +++G   +ER
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 247 ADDALRIFDEMKSFDVK--PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
             +A  +  +M S   +  P+ VTY+ LL G C AGK+ E +++L+E++ R + P D  +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP-DALM 119

Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
           + K++   CKS  L  A ++L+ MIR         +  LI   C+ +  + A  LL  + 
Sbjct: 120 YTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA 179

Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
                    S +  +  +YN ++  LC  G+  +AE    ++   G   D VA+++ + G
Sbjct: 180 --------ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYG 231

Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDAD------AYICLIESYLRKGEPADAKTALDSMIE 477
             K G   +A ++++ M      RD+D       Y  +++   + G+     TAL+ M +
Sbjct: 232 LCKSGKVLNAHQVLEQM------RDSDHDPNVVTYNTILDGLCKSGK---IDTALEMMEQ 282

Query: 478 DGHSPASSL----FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
              S    L    + +V++ L + GR Q A  VM++M   G + ++   + ++  L   G
Sbjct: 283 MASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342

Query: 534 HVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD-----FCLGRDCIID 585
            +EEA+  +  M   G  PN   + SL+  L   G+   A ++++        G  C   
Sbjct: 343 KIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPS 402

Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           +++Y  ++  L  AG+  +A     ++  +G   D  S   ++ GL + G   QA
Sbjct: 403 VSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 216/463 (46%), Gaps = 23/463 (4%)

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G  P   T+N ++ GF    +     R  E M +RGI  +VV+YN ++ G  + ++  EA
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 216 EKLFAEMKEKN--IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
           E+L  +M  +     P +++Y+T++ GY    + +++  +  E+ S  ++P+A+ YT ++
Sbjct: 65  EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC + ++ E  ++L EM+     P   + F  L+   C+  +L  A  +L+ M    +
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLIT-FNTLISGCCREKNLEMADSLLQTMAASGV 183

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
             +   Y  L++  CKA     A +LL+++          S    +  +Y+  +  LC +
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERM--------KASGCAPDVVAYSSFVYGLCKS 235

Query: 394 GQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRR-GVPRDAD 450
           G+   A     Q M+    DP  V +N ++ G  K G  D+A E+++ M    G   +  
Sbjct: 236 GKVLNAHQVLEQ-MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
            Y  +++   + G   +A++ +++M   G  P    + S++  L + G+++ A   ++ M
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354

Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG--------SVPNFDSLLSVLS 562
             +G K N      ++  L   G + EA   ++ M   G        SV  +++L+  L 
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLC 414

Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
           + G+   A+K       + C  D  SY  +++ L  +G+ L A
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 188/415 (45%), Gaps = 16/415 (3%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQ 119
           ++E L ++ + + A  ++ DM  +G +   D+  +  L+  Y K G V+ES ++   +  
Sbjct: 51  LLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVIS 110

Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
            G+      Y  +   + +  R   A     +M+  G  PT  T+N ++ G      LE 
Sbjct: 111 RGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEM 170

Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
           A    + M + G+  DVVTYNT+++G  +  ++ EAE+L   MK     P V++Y++ + 
Sbjct: 171 ADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230

Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
           G     +  +A ++ ++M+  D  PN VTY  +L GLC +GK+    +++ +M       
Sbjct: 231 GLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG 290

Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
            +   +  ++   CK G    A  V++AM R     +   Y  L+   CKA   + A++ 
Sbjct: 291 LNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV----LDP- 414
           + ++  +    +P       A +Y  ++  LC  G+  +AE    ++   G       P 
Sbjct: 351 VREMAMEGC--KPN------AVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPS 402

Query: 415 -VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
              +N LI G  K G  D A +  + M  +G   D  +Y  ++E   R G    A
Sbjct: 403 VSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 211/465 (45%), Gaps = 16/465 (3%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M + G   +   F  L+  + K+G   +  ++ + M   G++ +V SY+ L + + +  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 142 YMMAKRYFNKMLSEG--IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           +  A+     M+S G    P   TY+ +L G+  + K+E +    +++ SRG+  D + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
             ++    +  ++ EA +L  EM      PT+I++ T+I G    +  + A  +   M +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             VK + VTY  L+ GLC AG++ E +++L  M      P D   +   +   CKSG + 
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP-DVVAYSSFVYGLCKSGKVL 239

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
            A  VL+ M           Y  +++  CK+   D A+++++++   +          + 
Sbjct: 240 NAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD-------GCGLN 292

Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVK 438
              Y+ ++  LC  G+T +A      + + G   D V +++L+ G  K G  + A E V+
Sbjct: 293 VVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR 352

Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM-----IEDGHSPASSLFRSVMES 493
            M   G   +A  Y  L+      G  A+A+  ++ M       D   P+ S + +++  
Sbjct: 353 EMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGG 412

Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           L + GR+  A +  + M  +G   +    + I+E L   G   +A
Sbjct: 413 LCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 185/388 (47%), Gaps = 12/388 (3%)

Query: 46  VERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKG 105
           + R G    D  T+  ++    + GK+  +R +L ++  +G++ D  M+  ++ S  K  
Sbjct: 72  ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSA 131

Query: 106 IVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYN 165
            + E++++ + M + G   ++ +++ L     R     MA      M + G++    TYN
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYN 191

Query: 166 VMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
            ++ G   + +L+ A +  E MK+ G + DVV Y++ + G  +  K+  A ++  +M++ 
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS 251

Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAVTYTALLPGLCDAGKMVE 284
           + +P V++Y T++ G     + D AL + ++M S D    N V Y+ ++ GLC  G+  E
Sbjct: 252 DHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
            + V+  M      P D   +  L+   CK+G +  A + ++ M        A  Y  L+
Sbjct: 312 ARSVMEAMARAGCRP-DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370

Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILR--PQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
              C       A ++++++          P S      S+YN +I  LC  G+   A  F
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSV-----STYNALIGGLCKAGRIDDALKF 425

Query: 403 FRQLMKKGVLDP--VAFNNLIRGHSKEG 428
           F+++  +G  DP  V+++ ++ G ++ G
Sbjct: 426 FQRMRSQGC-DPDGVSYSTIVEGLARSG 452



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/431 (22%), Positives = 189/431 (43%), Gaps = 50/431 (11%)

Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
           M      P  +++  ++ G+    R  D  R+ + M +  ++PN V+Y  LL GLC   +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
             E ++++R+M+ R                    G   +  D++              Y 
Sbjct: 61  WHEAEELVRDMISR-------------------GGR--STPDLVT-------------YS 86

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            L+  +CKA   + + +LL +++ +   LRP + +      Y  ++  LC + + G+A  
Sbjct: 87  TLLSGYCKAGKVEESRELLKEVISRG--LRPDALM------YTKVMASLCKSARLGEALE 138

Query: 402 FFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
              ++++ G     + FN LI G  +E N + A  +++ M   GV  D   Y  L++   
Sbjct: 139 LLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLC 198

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
           + G   +A+  L+ M   G +P    + S +  L + G+V  A +V++ M +     N+ 
Sbjct: 199 KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVV 258

Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSG----SVPNFDSLLSVLSEKGKTIAAVKLLDF 576
               IL+ L   G ++ AL  ++ M  S     +V  + +++  L + G+T  A  +++ 
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
                C  D+ +Y  +++ L  AGK   A   + ++  +G   +  +   L+ GL   G 
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 637 TKQADILSRMI 647
             +A+   RM+
Sbjct: 379 LAEAE---RMV 386



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 151/332 (45%), Gaps = 25/332 (7%)

Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
           M R   P  +  +  L+  F K        +LL+ +  + I  +P         SYN ++
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGI--QPNVV------SYNGLL 52

Query: 388 QHLCHNGQTGKAEIFFRQLMKKG---VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
           + LC   +  +AE   R ++ +G     D V ++ L+ G+ K G  + + E++K +  RG
Sbjct: 53  EGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRG 112

Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
           +  DA  Y  ++ S  +     +A   L+ MI  G  P    F +++     +  ++ A 
Sbjct: 113 LRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMAD 172

Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVL 561
            ++++M   GVK ++     +++ L   G ++EA   ++ M  SG  P+   + S +  L
Sbjct: 173 SLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGL 232

Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
            + GK + A ++L+     D   ++ +Y  +LD L  +GK   A     ++ME+      
Sbjct: 233 CKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTA----LEMMEQ-----M 283

Query: 622 KSSDKLIAGLNQEGNTKQADILSRMIRGEMSR 653
            SSD    GLN  G +   D L ++ R + +R
Sbjct: 284 ASSDG--CGLNVVGYSTVVDGLCKLGRTQEAR 313


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 212/486 (43%), Gaps = 50/486 (10%)

Query: 15  RALVP---QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGK 71
           R LVP    F++ L+  +L  +   E A + F   E  G    D  +   MI+    VG 
Sbjct: 111 RGLVPGSNTFNNLLI--LLIKSNFFEKAWRVFN--ETKGNVKLDVYSFGIMIKGCCEVGY 166

Query: 72  LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
           L+    +L  M + G+  +  ++  LI+   K G ++   ++F  M +L V  +  +Y  
Sbjct: 167 LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTV 226

Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
           L     + G        + KM   GI P  +TYN M+       KL  A   F++M+ RG
Sbjct: 227 LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 286

Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
           ++ +VVTYNT+I G  + +++ EAE+L   MK   + P +ISY T+I GY ++   D A 
Sbjct: 287 VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKAS 346

Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
            +F++MKS    P+  TY  L+ G  +A     V  ++REM  R + P     +  L+  
Sbjct: 347 SLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSP-SKVTYTILMDA 405

Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
             +S ++  A  +  +M +  +  +   YG+LI   C       A KL   L   E+ L+
Sbjct: 406 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL--DEMHLK 463

Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPD 431
           P   +      YN MI   C  G + +                                 
Sbjct: 464 PNDVI------YNTMIYGYCKEGSSYR--------------------------------- 484

Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
            A  ++K MG  G+  +  +Y   I    +  +  +A+  L  MIE G  P+ S++  + 
Sbjct: 485 -ALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMIS 543

Query: 492 ESLFED 497
           ++ F++
Sbjct: 544 KARFDN 549



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/537 (20%), Positives = 232/537 (43%), Gaps = 43/537 (8%)

Query: 28  NVLHGAKNSEHALQF-FRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG 86
           + L G +++  ++ F    +  + LF+H +   LK+I      G+++ +      +  + 
Sbjct: 16  SALQGXQHTHQSISFILHLLISSNLFSHSQSLLLKLIS-----GQISSSSFTPSSLFHEL 70

Query: 87  VQWDEDMF-------EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            Q   D F       E +I ++ +  + ++++   + M   G+     +++ L  L+++ 
Sbjct: 71  TQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKS 130

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
             +  A R FN+     ++   +++ +M+ G      L+        M+  G+S +VV Y
Sbjct: 131 NFFEKAWRVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVY 189

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
            T+I+G  +   ++  ++LF +M E ++     +YT +I G+  +    D + ++++MK 
Sbjct: 190 TTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKL 249

Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLN 319
             + PN  TY +++   C+ GK+    ++  EM ER +   +   +  L+G  C+   + 
Sbjct: 250 TGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC-NVVTYNTLIGGLCQERRVL 308

Query: 320 AAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK---------LVEKEIIL 370
            A  ++  M R  +      Y  LI+ +C     D+A  L ++         L    I++
Sbjct: 309 EAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILI 368

Query: 371 RPQS-----------TLDMEASSYNP-------MIQHLCHNGQTGKAEIFFRQLMKKG-V 411
              S             +MEA   +P       ++  L  +    KA   +  + K G V
Sbjct: 369 AGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLV 428

Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
            D   +  LI G    G+   A ++ K +    +  +   Y  +I  Y ++G    A   
Sbjct: 429 ADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRL 488

Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
           L  M E+G  P  + + S +  L +D +   A  ++K M+E G+K ++ +   I +A
Sbjct: 489 LKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 545



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 106/289 (36%), Gaps = 38/289 (13%)

Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNP 430
           +  + ++  S+  MI+  C  G   K      Q+ + G L P  V +  LI G  K G+ 
Sbjct: 144 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMG-LSPNVVVYTTLIDGCCKNGDI 202

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           +   ++   MG   V  +   Y  LI  + + G   D     + M   G  P    + S+
Sbjct: 203 ERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSM 262

Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
           +     DG++  A  +   M E+GV  N+     ++  L     V EA   +  M + G 
Sbjct: 263 ICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGL 322

Query: 551 VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
            PN                                L SY  ++D   + G    A S+  
Sbjct: 323 SPN--------------------------------LISYNTLIDGYCSIGNLDKASSLFN 350

Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKEK 659
           ++   G      + + LIAG ++  N+     ++ M+R   +RG    K
Sbjct: 351 QMKSSGQSPSLATYNILIAGFSEAKNSAG---VTDMVREMEARGLSPSK 396


>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
          Length = 642

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 129/559 (23%), Positives = 249/559 (44%), Gaps = 40/559 (7%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L  + DH LV ++L         +QFF+W  +   F HD  T++ +I  
Sbjct: 76  WGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRC 135

Query: 66  LGRV---GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           L      G++   R I   +    V     +   L+++ G+  +V +++ +F   K    
Sbjct: 136 LEEARLYGEM--YRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKC 193

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAI 181
           + +  +Y+++  ++++ G++      + +M +EG   P   TY+ ++  +    + ++AI
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
           R F++MK   +      Y T++  Y +  K+++A  LF EMK     PTV +YT +IKG 
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM-VERYIPP- 299
               R D+A   + +M    + P+ V    L+  L   G++ E+  V  EM + R  P  
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373

Query: 300 -KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
              N+V   L   +     +++  D +KA    S+      Y ILI+ +CK    ++A+ 
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKAD---SVSPSEFTYSILIDGYCKTNRVEKALL 430

Query: 359 LLDKLVEKEIILRPQSTLDM----------EASS-----------------YNPMIQHLC 391
           LL+++ EK     P +   +          EA+                  Y  MI+H  
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFG 490

Query: 392 HNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
             G+  +A   F ++  +G   D  A+N L+ G  K G  + A  +++ M   G   D +
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550

Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
           ++  ++  + R G P  A    +++   G  P    + +++      G  + A+R+M+ M
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610

Query: 511 VEKGVKENLDLVAKILEAL 529
            +KG + +    + IL+A+
Sbjct: 611 KDKGFEYDAITYSSILDAV 629



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 1/235 (0%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
           +F ++++ +        E AL     ++  G F      +  +I  LG+  +   A  + 
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKG-FPPCPAAYCSLINALGKAKRYEAADELF 467

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
            ++ +        ++ V+I+ +GK G + E+V +F+ MK  G    V +Y+AL   +++ 
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G    A     KM   G     +++N++L GF  +     AI  FE +K  GI  D VTY
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
           NT++  +      +EA ++  EMK+K  E   I+Y++++     V+   D +  F
Sbjct: 588 NTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/296 (20%), Positives = 121/296 (40%), Gaps = 14/296 (4%)

Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
           R +   +   Y  LI    +A +Y    + + ++V    +    + L       + +++ 
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVL-------SELVKA 171

Query: 390 LCHNGQTGKA-EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG--VP 446
           L       KA  +F++   +K       +N++I    +EG  +   E+   M   G   P
Sbjct: 172 LGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP 231

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D   Y  LI SY + G    A    D M ++   P   ++ +++   F+ G+V+ A  +
Sbjct: 232 -DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
            + M   G    +    ++++ L   G V+EA G    M++ G  P+    ++L+++L +
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350

Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
            G+      +        C   + SY  V+ AL  +   ++  S  F  M+   V+
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 195/412 (47%), Gaps = 24/412 (5%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL- 120
           M+  L   GK   A  +L  MP+         +  +I  +  +G VQ +    DIM+++ 
Sbjct: 120 MLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAA---LDIMREMR 172

Query: 121 ---GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLK 176
              G+  +  +Y  +     + GR   A + F++ML++G ++P    YN ++ G+    K
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 232

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTT 236
           L+TA+ + + M  RG+++ V TYN +++      +  EA +L  EM  K + P V +Y  
Sbjct: 233 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 292

Query: 237 MIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY 296
           +I G+        AL IF+ M    V+   VTYTAL+  L   G++ E  K+  E V R 
Sbjct: 293 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 352

Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
           I P D  ++  L+     SG+++ A +++  M +  I  +   Y  L+   C     D A
Sbjct: 353 IRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411

Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-- 414
            KL+D++ E+ I  +P      +  +YN +I      G    A     ++M KG  +P  
Sbjct: 412 RKLIDEMTERGI--QP------DLVTYNTLISGYSMKGDVKDALRIRNEMMNKG-FNPTL 462

Query: 415 VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
           + +N LI+G  K G  D A  +VK M   G+  D   YI LIE    + E A
Sbjct: 463 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 514



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 211/461 (45%), Gaps = 21/461 (4%)

Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
           T++R +  MKS  + +   + + +++          A  LFA+M    +     ++  M+
Sbjct: 66  TSLRLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIML 121

Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
           +   +  +   AL +  +M     +PNAVTY  ++ G C  G++     ++REM ER   
Sbjct: 122 RHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGI 177

Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMYDRAI 357
             +   +  ++   CK G ++ A  V   M+ +  +  EA  Y  LI  +C     D A+
Sbjct: 178 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 237

Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
              D++VE+ +         M  ++YN ++  L  +G+  +A     ++  KG+  D   
Sbjct: 238 LYRDRMVERGVA--------MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
           +N LI GH KEGN   A EI + M RRGV      Y  LI +  +KG+  +     D  +
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
             G  P   L+ +++ S    G +  A  +M  M +K +  +      ++  L + G V+
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 409

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           EA   ID M + G  P+   +++L+S  S KG    A+++ +  + +     L +Y  ++
Sbjct: 410 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 469

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
             L   G+  +A +++ +++E G   D  +   LI GL  E
Sbjct: 470 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 157/333 (47%), Gaps = 2/333 (0%)

Query: 37  EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG-VQWDEDMFE 95
           + AL   R +   G    ++ T+  +I    +VG+++ A  +  +M  KG V+ +  M+ 
Sbjct: 162 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 221

Query: 96  VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
            LI  Y  +G +  ++   D M + GV  +V +Y+ L   +   GR   A     +M  +
Sbjct: 222 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 281

Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
           G+ P   TYN+++ G      ++ A+  FE+M  RG+   VVTY  +I   ++  ++ E 
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341

Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
           +KLF E   + I P ++ Y  +I  +      D A  I  EM+   + P+ VTY  L+ G
Sbjct: 342 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 401

Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
           LC  G++ E +K++ EM ER I P D   +  L+      G +  A  +   M+      
Sbjct: 402 LCLLGRVDEARKLIDEMTERGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 460

Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
               Y  LI+  CK    D A  ++ ++VE  I
Sbjct: 461 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 493



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 192/439 (43%), Gaps = 58/439 (13%)

Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
           +L++ MK  ++  +  S   ++    +      A  +F +M    +     T+  +L  L
Sbjct: 69  RLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRHL 124

Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMI-RLSIP 334
           C AGK     ++LR+M      P+ N+V +  ++   C  G + AA D+++ M  R  I 
Sbjct: 125 CSAGKPARALELLRQM------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 178

Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNG 394
                YG +I  +CK    D A+K+ D+++ K  + +P      EA  YN +I   C  G
Sbjct: 179 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV-KP------EAVMYNALIGGYCDQG 231

Query: 395 QTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
           +   A ++  +++++GV   VA +N L+     +G    A+E+V+ MG +G+  D   Y 
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI  + ++G    A    ++M   G       + +++ +L + G+VQ   ++    V +
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSE-KGKTIAAVK 572
           G++ +L     +L   L+  H                  N D    ++ E + K IA   
Sbjct: 352 GIRPDL-----VLYNALINSHSTSG--------------NIDRAFEIMGEMEKKRIAP-- 390

Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
                       D  +Y  ++  L   G+   A  ++ ++ E+G   D  + + LI+G +
Sbjct: 391 ------------DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 438

Query: 633 QEGNTKQADILSRMIRGEM 651
            +G+ K A      IR EM
Sbjct: 439 MKGDVKDA----LRIRNEM 453



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 121/241 (50%), Gaps = 3/241 (1%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + L P  F +N++ N      N + AL+ F  + R G+      T+  +I  L + G++ 
Sbjct: 281 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV-RATVVTYTALIYALSKKGQVQ 339

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
               +  +  ++G++ D  ++  LI S+   G +  + +I   M++  +     +Y+ L 
Sbjct: 340 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 399

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
           + +   GR   A++  ++M   GI+P   TYN ++ G+ +   ++ A+R   +M ++G +
Sbjct: 400 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 459

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV-ERADDALR 252
             ++TYN +I G  +  + D+AE +  EM E  I P   +Y ++I+G     ERA D  R
Sbjct: 460 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDER 519

Query: 253 I 253
           +
Sbjct: 520 L 520


>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
 gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
          Length = 886

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 137/608 (22%), Positives = 258/608 (42%), Gaps = 47/608 (7%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           M+    + G  +HAR    +M  +G++ +  +F  L+ +Y   G ++ ++   + MK  G
Sbjct: 257 MVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEG 316

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           +E +V +Y  L     +      A   F +  ++        Y+ ++     S  ++ A 
Sbjct: 317 IEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAE 376

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
               +M+  GI   +  Y++M++GY   +   +   +F  +KE   +PT+ISY  +I  Y
Sbjct: 377 ELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLY 436

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
           V V +   A+ I  EM+S  +K N  TY+ L+ G            +  +M++  + P D
Sbjct: 437 VKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQP-D 495

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
            +++  L+   CK G+++ A  + + M +  +      +  +IE F  A    RA   LD
Sbjct: 496 RAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLD 555

Query: 362 -------------------KLVEKEIILRPQSTLDM--------EASSYNPMIQHLCHNG 394
                               LV K  + +  S LD            +Y  +++    +G
Sbjct: 556 LMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASG 615

Query: 395 QTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
             GKA  +F ++ + G+ LD   +  L+R   K G   SA  + + M  + +PR+   Y 
Sbjct: 616 DIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYN 675

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
            LI+ + R+G+  +A   L  M EDG  P    F S + +  + G +Q A  V++ M + 
Sbjct: 676 ILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADV 735

Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAA 570
           G+K N+     +++        + AL   + M  +G  P+   +  L++ L  +   +  
Sbjct: 736 GLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEG 795

Query: 571 ---VKLLDFC---LGRDCIIDLAS---YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
                +   C      D  +DL +   + K L  +   G  L       + +++    DW
Sbjct: 796 STYTGIFSVCREMFENDLTVDLRTAVHWSKWLHKIERTGGALT------EALQRIFPPDW 849

Query: 622 KSSDKLIA 629
            SS+ L A
Sbjct: 850 NSSENLEA 857



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 196/450 (43%), Gaps = 47/450 (10%)

Query: 24  NLVYNVLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
           ++ ++++HG    ++ +  L  F  ++  G F     ++  +I +  +VGK+  A  I  
Sbjct: 392 DVYHSMMHGYTVVQDEKKCLIVFERLKECG-FKPTIISYGCLINLYVKVGKVPKAIAISK 450

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           +M   G++ +   + +LI  +        +  IF+ M + G++     Y+ L +   + G
Sbjct: 451 EMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMG 510

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
               A R F +M  E ++P+  T+  ++ GF ++  ++ A    + M+  G +  V+TYN
Sbjct: 511 NMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYN 570

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
            +I+G  R  ++++A  +  +M    I P   +YT +++GY A      A   F ++K  
Sbjct: 571 ALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 630

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            +K +   Y  LL   C +G+M     V REM  + I P++  ++  L+    + G +  
Sbjct: 631 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI-PRNTFIYNILIDGWARRGDVWE 689

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           AAD+LK M    IP     +   I   CKA    RA  ++ ++   ++ L+P        
Sbjct: 690 AADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMA--DVGLKP-------- 739

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
                       N +T                    F  LI+G ++   PD A +  + M
Sbjct: 740 ------------NVKT--------------------FTTLIKGWARVSLPDRALKCFEEM 767

Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKT 470
              G+  D  AY CL+ S L +    +  T
Sbjct: 768 KSAGLKPDEAAYHCLVTSLLSRATVMEGST 797



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 116/243 (47%), Gaps = 6/243 (2%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I  L R  ++  A  +L  M   G+  +E  + +++  Y   G + ++ + F  +
Sbjct: 568 TYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKI 627

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
           K+ G++  V  Y+ L +   + GR   A     +M  + I      YN+++ G+     +
Sbjct: 628 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 687

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
             A    + MK  GI  ++ T+ + IN   +   M  AE +  EM +  ++P V ++TT+
Sbjct: 688 WEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTL 747

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE------VQKVLRE 291
           IKG+  V   D AL+ F+EMKS  +KP+   Y  L+  L     ++E      +  V RE
Sbjct: 748 IKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGIFSVCRE 807

Query: 292 MVE 294
           M E
Sbjct: 808 MFE 810


>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 642

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 140/568 (24%), Positives = 244/568 (42%), Gaps = 17/568 (2%)

Query: 6   WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
           W    +  +  L  + DH LV+ VL         +QFF+W  +   F HD  + + +I  
Sbjct: 77  WGPDAEKALEVLKLKVDHRLVHEVLKIDVEINVKIQFFKWAGKRRNFEHDSSSFMALIHS 136

Query: 66  LGRVGKLNHARCILLDMPKKGVQWDEDMF-EVLIESYGKKGIVQESVKIFDIMKQLGVER 124
           L   G        + DM +        ++   +++  GK  +V +++ +F  +K    + 
Sbjct: 137 LDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIKGRKCKP 196

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEG-IEPTRHTYNVMLWGFFLSLKLETAIRF 183
           +  +Y+++  ++ + G        +N+M ++G   P   TY+ ++  F      ++AIR 
Sbjct: 197 AATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRL 256

Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
           F++MK  G+      Y T++  Y +  K+++A  +  EMK+K    TV +YT  IKG   
Sbjct: 257 FDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGK 316

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--- 300
             R DDA R+F +M     KP+ V   +L+  L   G++    K+ R+M      P    
Sbjct: 317 AGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVT 376

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
            N+V   L   +CK+   + AA   + M    I   +  Y ILI+ FCK    ++A+ LL
Sbjct: 377 YNTVIKALF--ECKAPA-SEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLL 433

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK-GVLDPVAFNN 419
           +++ EK     P        ++Y  +I  L    +   A   F +L +  G      +  
Sbjct: 434 EEMDEKGFPPCP--------AAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAV 485

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           +I+   K G    A ++   M + G   D  AY  L+   +R G   +A++ L +M E+G
Sbjct: 486 MIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENG 545

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
            SP  +    ++  L   G    A  +   M    +K +      +L  L   G  EEA 
Sbjct: 546 CSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAA 605

Query: 540 GRIDLMMQSGSVPNFDSLLSVLSEKGKT 567
             +  M   G   N  +  S+L   GK 
Sbjct: 606 KLMREMNLKGFEYNNITYTSILEAVGKV 633



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 3/234 (1%)

Query: 20  QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
            F ++++ +        E AL     ++  G F      +  +I  LG+V +   A  + 
Sbjct: 410 SFTYSILIDGFCKTNRIEKALLLLEEMDEKG-FPPCPAAYCSLINSLGKVKRYEAANELF 468

Query: 80  LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
           L++ +        ++ V+I+ +GK G + E+V +F+ M++LG +  V +Y+AL   ++R 
Sbjct: 469 LELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRA 528

Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
           G    A+     M   G  P  +++N++L G   +   + AI  F  MKS  I  D V+Y
Sbjct: 529 GMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSY 588

Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK--GYVAVERADDAL 251
           NT++   +     +EA KL  EM  K  E   I+YT++++  G V  +RA  AL
Sbjct: 589 NTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGKVDEDRAPAAL 642



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 49/325 (15%)

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY-GILIENFCKAEMYDRAIKL 359
           D+S FM L+    ++G        ++ M+R S    +  Y   +++   KA+M ++A+ +
Sbjct: 126 DSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSV 185

Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL--DPVAF 417
             ++  ++   +P +T      +YN MI  L   G   K    + ++   G    D V +
Sbjct: 186 FYQIKGRKC--KPAAT------TYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTY 237

Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
           + LI    K G+ DSA  +                                    D M E
Sbjct: 238 SALISAFGKLGHYDSAIRL-----------------------------------FDEMKE 262

Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
           +G  P + ++ +++   F+  +V+ A  V+K M +KG    +    + ++ L   G V++
Sbjct: 263 NGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDD 322

Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
           A      M++ G  P+    +SL+++L + G+    +KL        C  ++ +Y  V+ 
Sbjct: 323 AYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIK 382

Query: 595 ALLAAGKTLNAYSILFKIMEKGGVT 619
           AL       +  +  F+ M+  G+ 
Sbjct: 383 ALFECKAPASEAASWFEKMKGCGIA 407



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 44/228 (19%), Positives = 96/228 (42%), Gaps = 5/228 (2%)

Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
           D  +F  LI    + G     ++ ++ M R      +  Y+  I   L K +  +   ++
Sbjct: 126 DSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSV 185

Query: 473 DSMIEDGHS-PASSLFRSVMESLFEDGRVQTASRVMKSMVEKG-VKENLDLVAKILEALL 530
              I+     PA++ + S++  L ++G ++    +   M   G    +    + ++ A  
Sbjct: 186 FYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFG 245

Query: 531 MRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLA 587
             GH + A+   D M ++G  P    + +LL +  +  K   A+ ++     + C + + 
Sbjct: 246 KLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVF 305

Query: 588 SYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
           +Y + +  L  AG+  +AY +   +++ G   D    + LI  L + G
Sbjct: 306 TYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVG 353


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 210/457 (45%), Gaps = 16/457 (3%)

Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK-MLSEGIEPTR 161
           K G++ +++ +FD M +         Y+    ++LR  R  +A  Y+ + ++  G     
Sbjct: 22  KAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLP 81

Query: 162 HTYNVMLWGFFLS---LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
            TY+  +     +   + L        DM S G   D+  +NT +N   R  +++ A +L
Sbjct: 82  FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALEL 141

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M  K  +P V+SYT +I      +R D+A +++  +    + P+     AL+ GLC 
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201

Query: 279 AGKMVEVQKVLREMVERYIPPKDNS-VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
            G++    +++  +++  +  K NS V+  L+   C+ G ++ A  +   M R     + 
Sbjct: 202 GGRVDLAYELVVGVIKGGV--KVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDL 259

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTG 397
             Y IL+   C+  M D A++L++ +         +S ++ +  SYN +++  C      
Sbjct: 260 VTYNILLNYCCEEGMVDEAVRLVETM--------ERSGVEPDLYSYNELLKGFCKANMVD 311

Query: 398 KAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLI 456
           +A +   + M+ KG+ D V++N +I    K       +E+ + M  +G+  D   +  LI
Sbjct: 312 RAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILI 371

Query: 457 ESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVK 516
           +++LR+G     K  LD M +    P    + +V++ L ++G+V  A  V + MVE GV 
Sbjct: 372 DAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVN 431

Query: 517 ENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
            ++     +L        V +A+   D M   G  P+
Sbjct: 432 PDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPD 468



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/420 (21%), Positives = 187/420 (44%), Gaps = 14/420 (3%)

Query: 78  ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
           +LLDM   G   D   F   +    ++  ++ ++++F  M   G +  V SY  +   + 
Sbjct: 106 LLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALC 165

Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
              R+  A + + +++ +G+ P       ++ G     +++ A      +   G+ ++ +
Sbjct: 166 NAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSL 225

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
            YN +I+G+ R  ++D+A K+ A M      P +++Y  ++         D+A+R+ + M
Sbjct: 226 VYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETM 285

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK--DNSVFMKLLGVQCKS 315
           +   V+P+  +Y  LL G C A  MV+   ++  MVER       D   +  ++   CK+
Sbjct: 286 ERSGVEPDLYSYNELLKGFCKA-NMVDRAHLM--MVERMQTKGMCDVVSYNTVITAFCKA 342

Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
                  ++ + M    I  +   + ILI+ F +        KLLD++ +  ++  P   
Sbjct: 343 RRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVL--PDCI 400

Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAF 434
                  Y  ++ HLC NG+   A   FR +++ GV  D +++N L+ G  K      A 
Sbjct: 401 F------YTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAM 454

Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
            +   M  +G+  D   Y  ++   +R  + + A    D M+E G +    L  +++ ++
Sbjct: 455 HLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAI 514



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 45/274 (16%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+   R+G+++ A  I   M + G   D   + +L+    ++G+V E+V++ + M++ G
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289

Query: 122 VERSVKSYDALFKLILR-----RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLK 176
           VE  + SY+ L K   +     R   MM +R   K + + +     +YN ++  F  + +
Sbjct: 290 VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVV-----SYNTVITAFCKARR 344

Query: 177 LETAIRFFEDMKSRGISLDVVTYNTMINGYNR---------------------------- 208
                  FE+M  +GI  D+VT+N +I+ + R                            
Sbjct: 345 TRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTA 404

Query: 209 -------FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
                    K+D A  +F +M E  + P VISY  ++ G+    R  DA+ +FDEM+S  
Sbjct: 405 VVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKG 464

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
           + P+ VTY  ++ GL    K+    +V  +M+ER
Sbjct: 465 LYPDEVTYKLIVGGLIRGKKISLACRVWDQMMER 498



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 149/343 (43%), Gaps = 2/343 (0%)

Query: 24  NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
           N   N+L      E AL+ F  +   G  + D  ++  +I+ L    + + A  +   + 
Sbjct: 123 NTYLNLLCRQNRLETALELFHSMPSKGR-DPDVVSYTIIIDALCNAKRFDEAAKVWRRLI 181

Query: 84  KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
            KG+  D      L+      G V  + ++   + + GV+ +   Y+AL     R GR  
Sbjct: 182 DKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVD 241

Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
            A +    M   G  P   TYN++L        ++ A+R  E M+  G+  D+ +YN ++
Sbjct: 242 KAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELL 301

Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
            G+ +   +D A  +  E  +      V+SY T+I  +    R      +F+EM    ++
Sbjct: 302 KGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIR 361

Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
           P+ VT+  L+      G    V+K+L EM +  + P D   +  ++   CK+G ++ A  
Sbjct: 362 PDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLP-DCIFYTAVVDHLCKNGKVDVAHS 420

Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
           V + M+   +  +   Y  L+  FCK      A+ L D++  K
Sbjct: 421 VFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSK 463



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 155/366 (42%), Gaps = 14/366 (3%)

Query: 63  IEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGV 122
           + +L R  +L  A  +   MP KG   D   + ++I++        E+ K++  +   G+
Sbjct: 126 LNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGL 185

Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
               K+  AL   +   GR  +A      ++  G++     YN ++ GF    +++ A++
Sbjct: 186 SPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMK 245

Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
               M   G   D+VTYN ++N       +DEA +L   M+   +EP + SY  ++KG+ 
Sbjct: 246 IKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFC 305

Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
                D A  +  E        + V+Y  ++   C A +  +  ++  EM  + I P D 
Sbjct: 306 KANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRP-DM 364

Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
             F  L+    + G  +    +L  M ++ +  +   Y  ++++ CK    D A  +   
Sbjct: 365 VTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRD 424

Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF---- 417
           +VE  +        + +  SYN ++   C   +   A   F ++  KG+  D V +    
Sbjct: 425 MVENGV--------NPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIV 476

Query: 418 NNLIRG 423
             LIRG
Sbjct: 477 GGLIRG 482



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 185/467 (39%), Gaps = 27/467 (5%)

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M    I    + Y + I+   +   +++A  LF +M E N     + Y   I   +   R
Sbjct: 1   MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60

Query: 247 ADDALRIFDEM---KSFDVKPNAVTYTALLPGLCDAGKMVE---VQKVLREMVERYIPPK 300
              A   +      + F + P   TY+  +  LC A   +    +  +L +M      P 
Sbjct: 61  LHLAHHYYRRHVIPRGFSLLP--FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVP- 117

Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
           D   F   L + C+   L  A ++  +M       +   Y I+I+  C A+ +D A K+ 
Sbjct: 118 DIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVW 177

Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
            +L++K   L P    D +A     ++  LC  G+   A      ++K GV ++ + +N 
Sbjct: 178 RRLIDKG--LSP----DYKACV--ALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229

Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
           LI G  + G  D A +I   M R G   D   Y  L+     +G   +A   +++M   G
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289

Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVM-KSMVEKGVKENLDLVA--KILEALLMRGHVE 536
             P    +  +++   +   V  A  +M + M  KG+    D+V+   ++ A        
Sbjct: 290 VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGM---CDVVSYNTVITAFCKARRTR 346

Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
           +     + M   G  P+   F+ L+     +G T    KLLD       + D   Y  V+
Sbjct: 347 KGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVV 406

Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
           D L   GK   A+S+   ++E G   D  S + L+ G  +      A
Sbjct: 407 DHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDA 453



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 6/208 (2%)

Query: 1   MAERA---WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRE 57
           M +RA      R+Q K   +     +N V      A+ +    + F  +   G+   D  
Sbjct: 309 MVDRAHLMMVERMQTK--GMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGI-RPDMV 365

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T   +I+   R G  +  + +L +M K  V  D   +  +++   K G V  +  +F  M
Sbjct: 366 TFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDM 425

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + GV   V SY+AL     +  R M A   F++M S+G+ P   TY +++ G     K+
Sbjct: 426 VENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKI 485

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMING 205
             A R ++ M  RG +L+     T++N 
Sbjct: 486 SLACRVWDQMMERGFTLNRHLSETLVNA 513


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 216/486 (44%), Gaps = 22/486 (4%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  +++S+ K       V +   ++   ++    + + L       G+  +A    +K+L
Sbjct: 66  FNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKIL 125

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G +P   T   ++ G  L  +++ A+ F + + ++G  LD V+Y T+ING  +  +  
Sbjct: 126 KWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETR 185

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A +L   +  +  EP V+ Y T+I      +   +A  +F EM    +  N VTY+A++
Sbjct: 186 AAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAII 245

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
            G C  GK+ E    L EMV + I P D  ++  L+    K G +  A +VL  +++  +
Sbjct: 246 HGFCIVGKLTEALGFLNEMVLKAINP-DVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCL 304

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  LI+ + K      A+ L+               +  +  SYN MI  LC  
Sbjct: 305 KPNVITYNTLIDGYAKHVF--NAVGLMG--------------VTPDVWSYNIMINRLCKI 348

Query: 394 GQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
            +  +A   ++++ +K  V + V +N+LI G  K G    A++++  M  RG   +   Y
Sbjct: 349 KRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITY 408

Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG-RVQTASRVMKSMV 511
             LI    + G+   A   ++ M + G  P       ++  L   G R++ A  + + ++
Sbjct: 409 NSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLL 468

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           +KG   N+     I+      G ++EA      M  SG  PN   F  ++  L EKG+T 
Sbjct: 469 DKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETD 528

Query: 569 AAVKLL 574
            A KLL
Sbjct: 529 KAEKLL 534



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 202/456 (44%), Gaps = 19/456 (4%)

Query: 85  KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
           K +Q D     +LI  +   G +  +  +   + + G +    +   L K +  +G+   
Sbjct: 92  KAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKK 151

Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
           A  + +K+L++G    + +Y  ++ G     +   AI+    +  R    +VV YNT+I+
Sbjct: 152 ALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIID 211

Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
              + K + EA  LF+EM  K I   V++Y+ +I G+  V +  +AL   +EM    + P
Sbjct: 212 CLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINP 271

Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
           +   Y  L+  L   GK+ E + VL  +V+  + P   +    + G          A  V
Sbjct: 272 DVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY---------AKHV 322

Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
             A+  + +  +   Y I+I   CK +  + A+ L  ++ +K ++  P +       +YN
Sbjct: 323 FNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMV--PNTV------TYN 374

Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
            +I  LC +G+   A     ++  +G   + + +N+LI G  K G  D A  ++  M  +
Sbjct: 375 SLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQ 434

Query: 444 GVPRDADAYICLIESYLRKGEP-ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
           G+  D      L+   L KG+   +A+     +++ G+ P    +  ++    ++G +  
Sbjct: 435 GIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDE 494

Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
           A  +   M + G   N      I+ ALL +G  ++A
Sbjct: 495 AYALQSKMEDSGCSPNAITFKIIICALLEKGETDKA 530



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 200/444 (45%), Gaps = 57/444 (12%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL F   +   G F  D+ ++  +I  + ++G+   A  +L  +  +  + +  M+  +I
Sbjct: 152 ALHFHDKLLAQG-FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTII 210

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +   K+ +V E+  +F  M   G+  +V +Y A+       G+   A  + N+M+ + I 
Sbjct: 211 DCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAIN 270

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P  + YN ++       K++ A      +    +  +V+TYNT+I+GY        A+ +
Sbjct: 271 PDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHV 322

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  +    + P V SY  MI     ++R ++AL ++ EM   ++ PN VTY +L+ GLC 
Sbjct: 323 FNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCK 382

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           +G++     ++ EM +R                    GH    A+V+             
Sbjct: 383 SGRISYAWDLIDEMHDR--------------------GH---HANVIT------------ 407

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH--LCHNGQT 396
            Y  LI   CK    D+AI L++K+ ++ I  +P    DM   +   ++ H  LC   + 
Sbjct: 408 -YNSLINGLCKNGQLDKAIALINKMKDQGI--QP----DMYTLN---ILLHGLLCKGKRL 457

Query: 397 GKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
             A+  F+ L+ KG    V  +N +I GH KEG  D A+ +   M   G   +A  +  +
Sbjct: 458 KNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKII 517

Query: 456 IESYLRKGEPADAKTALDSMIEDG 479
           I + L KGE   A+  L  MI  G
Sbjct: 518 ICALLEKGETDKAEKLLCEMIARG 541



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 111/513 (21%), Positives = 221/513 (43%), Gaps = 26/513 (5%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           F++ML     P    +N +L  F       T +     ++ + I  D  T N +IN +  
Sbjct: 51  FHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCH 110

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             +++ A  + +++ +   +P  ++ TT+IKG     +   AL   D++ +   + + V+
Sbjct: 111 LGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVS 170

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ G+C  G+     ++LR +  R   P +  ++  ++   CK   ++ A ++   M
Sbjct: 171 YGTLINGVCKIGETRAAIQLLRRIDGRLTEP-NVVMYNTIIDCLCKRKLVSEACNLFSEM 229

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
               I      Y  +I  FC       A+  L+++V K I        + +   YN ++ 
Sbjct: 230 SVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAI--------NPDVYIYNTLVD 281

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
            L   G+  +A+     ++K   L P  + +N LI G++K         +   +G  GV 
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKT-CLKPNVITYNTLIDGYAK--------HVFNAVGLMGVT 332

Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
            D  +Y  +I    +     +A      M +    P +  + S+++ L + GR+  A  +
Sbjct: 333 PDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDL 392

Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
           +  M ++G   N+     ++  L   G +++A+  I+ M   G  P+    + LL  L  
Sbjct: 393 IDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLC 452

Query: 564 KGKTIA-AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
           KGK +  A  L    L +    ++ +Y  ++      G    AY++  K+ + G   +  
Sbjct: 453 KGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAI 512

Query: 623 SSDKLIAGLNQEGNTKQAD-ILSRMI-RGEMSR 653
           +   +I  L ++G T +A+ +L  MI RG + R
Sbjct: 513 TFKIIICALLEKGETDKAEKLLCEMIARGLLKR 545


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 216/507 (42%), Gaps = 14/507 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  L+ S  K         + + M   G+   V + + L        R   A     K+L
Sbjct: 72  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKIL 131

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
             G +P   T+  ++ G  +  K+  A+  F+ M   G   +VVTY T+ING  +    +
Sbjct: 132 KLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191

Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
            A +L   M++ N +P V+ YT++I       +  +A  +F +M    + P+  TYT+L+
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 251

Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
             LC+  +   V  +L +M+   I P D  +F  ++   CK G +  A DV+  MI   +
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMP-DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV 310

Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
                 Y  L++  C     D A+K+ D +V       P         SYN +I   C  
Sbjct: 311 EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG--YAPN------VISYNTLINGYCKI 362

Query: 394 GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
            +  KA   F ++ +K ++      N +      G    A  +   M   G   D   Y 
Sbjct: 363 QRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYR 422

Query: 454 CLIESYLRKGEPADAKTALDSMIEDGH-SPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
            L++ YL K    D   AL   IE  +  P   ++  V++ +   G ++ A  +  ++  
Sbjct: 423 ILLD-YLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 481

Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
           KG++ N+     ++  L  RG ++EA      M  +G  P+   ++++   L +  + + 
Sbjct: 482 KGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALR 541

Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDAL 596
           A++LL   L R    D+++   +++ L
Sbjct: 542 AIQLLQEMLARGFSADVSTTTLLVEML 568



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 189/420 (45%), Gaps = 12/420 (2%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           AL  F  +   G F  +  T+  +I  L +VG  N A  +L  M +   Q D  ++  +I
Sbjct: 158 ALHLFDKMIGEG-FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSII 216

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           +S  K   V E+  +F  M   G+   + +Y +L   +     +       N+M++  I 
Sbjct: 217 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 276

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P    ++ ++       K+  A    + M  RG+  +VVTYN +++G+    +MDEA K+
Sbjct: 277 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 336

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
           F  M      P VISY T+I GY  ++R D A  +F+EM   ++ PN VTY  L+   C 
Sbjct: 337 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCH 395

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
            G++ +   +  EMV     P D + +  LL   CK  HL+ A  +LK +   ++  +  
Sbjct: 396 VGRLQDAIALFHEMVAHGQIP-DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 454

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
            Y I+I+  C+A   + A  +   L  K   LRP         +Y  MI  LC  G   +
Sbjct: 455 IYTIVIDGMCRAGELEAARDIFSNLSSKG--LRPN------VRTYTIMINGLCRRGLLDE 506

Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
           A   F ++   G   D   +N + +G  +      A ++++ M  RG   D      L+E
Sbjct: 507 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 566



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 213/499 (42%), Gaps = 49/499 (9%)

Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
           FN+ML     P+   +N +L     + +  T       M S GI  DV T N +IN +  
Sbjct: 57  FNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCH 116

Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
             ++  A  + A++ +   +P   ++TT+I+G     +  DAL +FD+M     +PN VT
Sbjct: 117 LNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT 176

Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
           Y  L+ GLC                                    K G+ NAA  +L++M
Sbjct: 177 YGTLINGLC------------------------------------KVGNTNAAIRLLRSM 200

Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
            + +   +   Y  +I++ CK      A  L  K+V + I          +  +Y  +I 
Sbjct: 201 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGI--------SPDIFTYTSLIH 252

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            LC+  +         Q++   ++ D V F+ ++    KEG    A ++V +M  RGV  
Sbjct: 253 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 312

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +   Y  L++ +  + E  +A    D+M+ +G++P    + +++    +  R+  A+ + 
Sbjct: 313 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLF 372

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDS---LLSVLSEK 564
           + M +K +  N  +    L      G +++A+     M+  G +P+  +   LL  L +K
Sbjct: 373 EEMCQKELIPN-TVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKK 431

Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
                A+ LL    G +   D+  Y  V+D +  AG+   A  I   +  KG   + ++ 
Sbjct: 432 SHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTY 491

Query: 625 DKLIAGLNQEGNTKQADIL 643
             +I GL + G   +A+ L
Sbjct: 492 TIMINGLCRRGLLDEANKL 510



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 194/459 (42%), Gaps = 11/459 (2%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D  T   +I  L   GK+  A  +   M  +G Q +   +  LI    K G    ++++ 
Sbjct: 138 DTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLL 197

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
             M+Q   +  V  Y ++   + +  +   A   F+KM+ +GI P   TY  ++      
Sbjct: 198 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNL 257

Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
            + +        M +  I  DVV ++T+++   +  K+ EA  +   M  + +EP V++Y
Sbjct: 258 CEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTY 317

Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
             ++ G+      D+A+++FD M      PN ++Y  L+ G C   +M +   +  EM +
Sbjct: 318 NALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQ 377

Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
           + + P  N+V    L   C  G L  A  +   M+      +   Y IL++  CK    D
Sbjct: 378 KELIP--NTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLD 435

Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
            A+ LL K +E        S +D +   Y  +I  +C  G+   A   F  L  KG+   
Sbjct: 436 EAMALL-KTIEG-------SNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN 487

Query: 415 V-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
           V  +  +I G  + G  D A ++   M   G   D   Y  + +  L+  E   A   L 
Sbjct: 488 VRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQ 547

Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
            M+  G S   S    ++E L +D   Q+  +++   V+
Sbjct: 548 EMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/487 (22%), Positives = 195/487 (40%), Gaps = 49/487 (10%)

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I     + +L  A  +L  + K G Q D   F  LI     +G + +++ +FD M   G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
            + +V +Y  L   + + G    A R    M     +P    Y  ++       ++  A 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
             F  M  +GIS D+ TY ++I+      +      L  +M    I P V+ ++T++   
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
               +  +A  + D M    V+PN VTY AL+ G C   +M E  KV   MV        
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV-------- 341

Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
                          H   A +V+              Y  LI  +CK +  D+A  L +
Sbjct: 342 ---------------HNGYAPNVIS-------------YNTLINGYCKIQRMDKATYLFE 373

Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNL 420
           ++ +KE+I  P +       +YN ++ H CH G+   A   F +++  G + D   +  L
Sbjct: 374 EMCQKELI--PNTV------TYNTLM-HXCHVGRLQDAIALFHEMVAHGQIPDLATYRIL 424

Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
           +    K+ + D A  ++K +    +  D   Y  +I+   R GE   A+    ++   G 
Sbjct: 425 LDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 484

Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
            P    +  ++  L   G +  A+++   M   G   +      I + LL     +EAL 
Sbjct: 485 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN---KEALR 541

Query: 541 RIDLMMQ 547
            I L+ +
Sbjct: 542 AIQLLQE 548


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 231/524 (44%), Gaps = 14/524 (2%)

Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
           S+ S + L + +L  GR+   +R F  + S G  P    +N  +     +  L  A+   
Sbjct: 128 SLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGML 187

Query: 185 EDMKSRGISL-DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
             M   G    +  +YN +I G  R  +  +A ++F EM E+ + P  I+Y TMI G++ 
Sbjct: 188 RRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIK 247

Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
               +   R+ D+M    +KPNA+TY  LL GLC AG+M E   +L EM  + + P D  
Sbjct: 248 GGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP-DGF 306

Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
            +  L     ++G   A   +    ++  +        IL+   CK      A ++L  L
Sbjct: 307 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 366

Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIR 422
           V   ++  P   +      YN +I   C  G+   A   F Q+  + +  D + +N LI 
Sbjct: 367 VNAGLV--PTRVI------YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 418

Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
           G  K     +A +++  M   GV    + +  LI++Y R G+       L  M E+G  P
Sbjct: 419 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 478

Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
               + S++ +  ++G++  A  ++  M  K V  N  +   I++A +  G  ++A   +
Sbjct: 479 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 538

Query: 543 DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
           + M  +G  P+   ++ L+  L  + +   A ++++       I D  SY  ++ A    
Sbjct: 539 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 598

Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
           G    A  +  ++ + G  +  ++  +LI+GL   G   + + L
Sbjct: 599 GNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 642



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/503 (22%), Positives = 218/503 (43%), Gaps = 29/503 (5%)

Query: 39  ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
           A+   R + R G    +  ++  +I  + R G+   A  +  +M ++ V  +   +  +I
Sbjct: 183 AVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMI 242

Query: 99  ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
           + + K G ++   ++ D M   G++ +  +Y+ L   + R GR        ++M S+ + 
Sbjct: 243 DGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV 302

Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
           P   TY+++  G   +   +  +  F      G+++   T + ++NG  +  K+  AE++
Sbjct: 303 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 362

Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
              +    + PT + Y T+I GY      + A   F +MKS  +KP+ +TY AL+ GLC 
Sbjct: 363 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 422

Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
           A ++   Q +L EM +  + P   + F  L+    ++G L     VL  M    +     
Sbjct: 423 AERITNAQDLLMEMQDNGVNPTVET-FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 481

Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ------------------------- 373
            YG ++  FCK      A+ +LD +  K+++   Q                         
Sbjct: 482 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 541

Query: 374 --STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNP 430
             + +     +YN +I+ LC+  Q  +AE     L    ++ D V++N LI      GN 
Sbjct: 542 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 601

Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
           D A ++ + M + G+      Y  LI      G   + +     M+++   P++++   +
Sbjct: 602 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 661

Query: 491 MESLFEDGRVQTASRVMKSMVEK 513
           +E+  + G    A  + K M++K
Sbjct: 662 VEAYSKYGNEIKAEDLRKEMLQK 684



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 137/294 (46%), Gaps = 2/294 (0%)

Query: 3   ERAWTTRLQNKIRALVP-QFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
           E A++T  Q K R + P    +N + N L  A+   +A      ++  G+ N   ET   
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV-NPTVETFNT 450

Query: 62  MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
           +I+  GR G+L     +L +M + G++ +   +  ++ ++ K G + E+V I D M    
Sbjct: 451 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 510

Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
           V  + + Y+A+    +  G    A     KM S GI P+  TYN+++ G     ++  A 
Sbjct: 511 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 570

Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
                + +  +  D V+YNT+I+       +D+A  L   M +  I+ TV +Y  +I G 
Sbjct: 571 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 630

Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER 295
               R ++   ++ +M   +V P+   +  ++      G  ++ + + +EM+++
Sbjct: 631 GGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 224/470 (47%), Gaps = 10/470 (2%)

Query: 81  DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
           D+ ++  ++ E  F+++   Y   G+ +E +++FD M + G+    +S         +R 
Sbjct: 125 DISEEKFEFWEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRR 184

Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
           R  +   +F +M+  G++ T ++  +++ G     ++E + +  ++   +GI  +  TYN
Sbjct: 185 RIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYN 244

Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
           T+IN Y + +     EK+   MK+  +    ++YT +I+  V   + +D  ++FDEM+  
Sbjct: 245 TIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRER 304

Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
            ++ +   YT+L+   C  G +     +  E+ E+ + P  ++    + GV CK G + A
Sbjct: 305 GIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGV-CKVGEMGA 363

Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
           A  ++  M    +      +  LI  +C+  M D A  + D ++EK+       T +  A
Sbjct: 364 AEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYD-VMEKKGFQADVFTCNTIA 422

Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
           S +N + ++        +A+ +  ++M+ GV L  V++ NLI  + KEGN + A  +   
Sbjct: 423 SCFNRLKRY-------DEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVE 475

Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
           M  + V  +A  Y  +I +Y ++G+  +A+    +M  +G  P S  + S++        
Sbjct: 476 MSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADN 535

Query: 500 VQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
           V  A R+   M  KG+ +N      ++  L   G  +EA G  D + + G
Sbjct: 536 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKG 585



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 187/372 (50%), Gaps = 3/372 (0%)

Query: 15  RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
           + + P+ + +N + N     ++     +  + +++ G+  +++ T+  +IE+  + GK+N
Sbjct: 234 KGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVV-YNKVTYTLLIELSVKNGKMN 292

Query: 74  HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
               +  +M ++G++ D  ++  LI    +KG ++ +  +FD + + G+  S  +Y AL 
Sbjct: 293 DVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALI 352

Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
             + + G    A+   N+M S+G+  T+  +N ++ G+     ++ A   ++ M+ +G  
Sbjct: 353 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQ 412

Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
            DV T NT+ + +NR K+ DEA++    M E  +  + +SYT +I  Y      ++A R+
Sbjct: 413 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRL 472

Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
           F EM S +V+PNA+TY  ++   C  GK+ E +K+   M    + P D+  +  L+  +C
Sbjct: 473 FVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDP-DSYTYTSLIHGEC 531

Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
            + +++ A  +   M    +   +  Y ++I    KA   D A  L D++  K   +  +
Sbjct: 532 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNK 591

Query: 374 STLDMEASSYNP 385
               +  S ++P
Sbjct: 592 VYTALIGSMHSP 603



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 225/515 (43%), Gaps = 56/515 (10%)

Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
           K +D +F++ +  G +    R F+ M+ +G+     +  V L       +++  + FF  
Sbjct: 136 KFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRR 195

Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
           M   G+ + V +   ++ G  R  ++++++KL  E   K I+P   +Y T+I  Y+    
Sbjct: 196 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRD 255

Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
                +I   MK   V  N VTYT L+      GKM +V+K+  EM ER I   D  V+ 
Sbjct: 256 FSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIES-DIHVYT 314

Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
            L+   C+ G++                                    RA  L D+L EK
Sbjct: 315 SLISWNCRKGNIK-----------------------------------RAFLLFDELTEK 339

Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHS 425
            ++  P S       +Y  +I  +C  G+ G AEI   ++  KGV +  V FN LI G+ 
Sbjct: 340 GLL--PSS------HTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYC 391

Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYIC--LIESYLRKGEPADAKTALDSMIEDGHSPA 483
           ++G  D A  I  +M ++G    AD + C  +   + R     +AK  L  M+E G   +
Sbjct: 392 RKGMIDEASMIYDVMEKKGF--QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLS 449

Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
           +  + ++++   ++G V+ A R+   M  K V+ N      ++ A   +G V+EA     
Sbjct: 450 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWA 509

Query: 544 LMMQSGSVPNFDSLLSVLSEKGKTIA-----AVKLLDFCLGRDCIIDLASYEKVLDALLA 598
            M  +G  P+  +  S++   G+ IA     A++L      +    +  +Y  ++  L  
Sbjct: 510 NMKANGMDPDSYTYTSLI--HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 567

Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQ 633
           AGK+  A+ +  +I  KG   D K    LI  ++ 
Sbjct: 568 AGKSDEAFGLYDEIKRKGYTIDNKVYTALIGSMHS 602



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 195/442 (44%), Gaps = 31/442 (7%)

Query: 82  MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
           M KKG+  DE    V + +  K+  +   ++ F  M   GV+ +V S   + + + RRG 
Sbjct: 161 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGE 220

Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
              +K+   +   +GI+P  +TYN ++  +          +  + MK  G+  + VTY  
Sbjct: 221 VEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTL 280

Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
           +I    +  KM++ EKLF EM+E+ IE  +  YT++I           A  +FDE+    
Sbjct: 281 LIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKG 340

Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
           + P++ TY AL+ G+C  G+M   + ++ EM  + +      VF  L+   C+ G ++ A
Sbjct: 341 LLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT-QVVFNTLINGYCRKGMIDEA 399

Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM--- 378
           + +   M +     +      +   F + + YD A + L +++E  + L   S  ++   
Sbjct: 400 SMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDV 459

Query: 379 ------------------------EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP 414
                                    A +YN MI   C  G+  +A   +   MK   +DP
Sbjct: 460 YCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWAN-MKANGMDP 518

Query: 415 --VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
               + +LI G     N D A  +   MG +G+ +++  Y  +I    + G+  +A    
Sbjct: 519 DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLY 578

Query: 473 DSMIEDGHSPASSLFRSVMESL 494
           D +   G++  + ++ +++ S+
Sbjct: 579 DEIKRKGYTIDNKVYTALIGSM 600



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 150/366 (40%), Gaps = 46/366 (12%)

Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
           D G   E  +V   MV++ +   + S  + L+  + K   ++   +  + M+   +    
Sbjct: 147 DNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAK-KRRRIDLCLEFFRRMVDSGVKITV 205

Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ-HLCHNGQT 396
               I++E  C+    +++ KL+ +   K I  +P      EA +YN +I  +L H   +
Sbjct: 206 YSLTIVVEGLCRRGEVEKSKKLIKEFSGKGI--KP------EAYTYNTIINAYLKHRDFS 257

Query: 397 GKAEIFFRQLMKKG--VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
           G  +I   ++MKK   V + V +  LI    K G  +   ++   M  RG+  D   Y  
Sbjct: 258 GVEKIL--KVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTS 315

Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
           LI    RKG    A    D + E G  P+S  + ++++ + + G +  A  +M  M  KG
Sbjct: 316 LISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKG 375

Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
           V     +   ++     +G ++EA    D+M + G   +  +          TIA+    
Sbjct: 376 VNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTC--------NTIAS---- 423

Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
             C  R     L  Y++             A   LF++ME G      S   LI    +E
Sbjct: 424 --CFNR-----LKRYDE-------------AKQWLFRMMEGGVRLSTVSYTNLIDVYCKE 463

Query: 635 GNTKQA 640
           GN ++A
Sbjct: 464 GNVEEA 469


>gi|357140804|ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Brachypodium distachyon]
          Length = 926

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 218/487 (44%), Gaps = 14/487 (2%)

Query: 94  FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
           F  LI     KG V ++  +FD+M  LG+   V+ Y +L     +  R + A      M+
Sbjct: 116 FPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKARRSLEADEMCCLMV 175

Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK-SRGISLDVVTYNTMINGYNRFKKM 212
             G+   R     ++ G     +LE A+  F  M+ + G  LD   Y TMI G      +
Sbjct: 176 KNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYV 235

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
           D   +L+ EMK++ +EPT ++Y  M+  Y   +    A+ +++ M    V P+   YT L
Sbjct: 236 DHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTML 295

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           +  LC  GK+VE +++  +M+ER + P D+ +F+ +     K   +      LKA+ +L 
Sbjct: 296 MTSLCKEGKLVEAEQLFTKMLERGVFP-DHVLFISIARFFPKGWEVVFVRKALKAVAKLD 354

Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
              E      L        +   A +LLD+++   ++  P   +       N MI  +C 
Sbjct: 355 CSGELLELSSLASGCSNMSLQQEAERLLDEMMRSNLL--PIDAI------LNMMIIAMCS 406

Query: 393 NGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
            G+   +     +L+  G    V  +N +I+   ++   D A  ++ +M  RGV  D   
Sbjct: 407 EGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMST 466

Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
              ++ +Y + G+   A +  D M +DG  P+ +++ S++  L   G  + A   ++ M+
Sbjct: 467 NSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMI 526

Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTI 568
           E G+  +  +   +L       H + A    D M++ G  P    + +L++ L +  K  
Sbjct: 527 EAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIR 586

Query: 569 AAVKLLD 575
            A+  L+
Sbjct: 587 KALHYLE 593



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 225/514 (43%), Gaps = 42/514 (8%)

Query: 58  THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
           T+  +I+ L R  +++ AR ++  M  +GV+ D     +++ +Y K G ++ ++ +FD M
Sbjct: 431 TYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEM 490

Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
            + G+E S+  YD++   + R G +  A+    +M+  G+ P    Y  +L G+      
Sbjct: 491 AKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHT 550

Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
           + A R F++M  RG+      Y  +ING  +  K+ +A      M E+      + YT +
Sbjct: 551 KAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTML 610

Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD-----------AGKMVEVQ 286
           I  +         L + D M    V+P+ +TY AL+ G+C            A K+ E  
Sbjct: 611 INQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRNIDRRDMRPSLAAKLDEA- 669

Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCK-----SGHLNAAADVLKAMIRLSIPTEAGHYG 341
              R M+ R +P      F    G Q K        ++ A ++++ ++   +  +   Y 
Sbjct: 670 ---RYMLFRLLP---QISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPDLHIYN 723

Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
            ++   C+A+  D A  LL  L+E+  +L    T       Y  ++ +    G + +A  
Sbjct: 724 GMLNGLCRAQKMDDAYNLL-SLMEQSGVLPNHVT-------YTILMNNDIRLGDSNRAIQ 775

Query: 402 FFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
            F  L   G V D V +N  I+G S       A     +M +RG      AY  ++E  L
Sbjct: 776 LFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQLL 835

Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
            +     A    D M   G+ P  S + S++  L +D + +   RV   M+EKG   +LD
Sbjct: 836 AENSTDLALNIFDDMFCHGYIPRYSNYSSLLLVLAKDNQWREVDRVFMMMLEKG--RSLD 893

Query: 521 L-VAKILEALLMRGHVEEALGRIDLMMQ-SGSVP 552
               K+LE L  +       G +DL  +  G++P
Sbjct: 894 TETKKLLEELCYKQ------GELDLAFELEGNMP 921



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 213/482 (44%), Gaps = 11/482 (2%)

Query: 93  MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
           +  ++I +   +G +  S  + D +   G E SV +Y+ + K + R+ R   A+   N M
Sbjct: 396 ILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLM 455

Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
            S G+ P   T ++M+  +     +E+A+  F++M   G+   +  Y+++I    R    
Sbjct: 456 QSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHF 515

Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
            EAE    +M E  + P  + YTT++ GY  +     A R+FDEM    ++P +  Y AL
Sbjct: 516 KEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGAL 575

Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
           + GL    K+ +    L  M+E     +   ++  L+    + G      D++  M++  
Sbjct: 576 INGLVKDNKIRKALHYLERMLEEGFATQ-TVIYTMLINQFFRKGEEWLGLDLVDLMMKNH 634

Query: 333 IPTEAGHYGILIENFCK-AEMYDRAIKLLDKLVEKEII---LRPQSTLDMEASSYNPMIQ 388
           +  +   YG L+   C+  +  D    L  KL E   +   L PQ +            +
Sbjct: 635 VEPDLITYGALVTGICRNIDRRDMRPSLAAKLDEARYMLFRLLPQISFGTRKGKQKK--K 692

Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
            +    +   A+   + L++ G++ D   +N ++ G  +    D A+ ++ +M + GV  
Sbjct: 693 RMSSEEKIDLAQNIIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLP 752

Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
           +   Y  L+ + +R G+   A    +S+  DGH     ++ + ++ L    R + A    
Sbjct: 753 NHVTYTILMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFF 812

Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEK 564
             M ++G   +     KI+E LL     + AL   D M   G +P   N+ SLL VL++ 
Sbjct: 813 LMMQKRGFVPSKAAYDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSLLLVLAKD 872

Query: 565 GK 566
            +
Sbjct: 873 NQ 874



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 132/676 (19%), Positives = 272/676 (40%), Gaps = 103/676 (15%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
           D   +  MI  L   G ++H   +  +M  +G++     + V++  Y K   V  +++++
Sbjct: 218 DAYAYTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELY 277

Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF-- 172
           ++M + GV   ++ Y  L   + + G+ + A++ F KML  G+ P  H   + +  FF  
Sbjct: 278 NVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPD-HVLFISIARFFPK 336

Query: 173 -----------------------------------LSLKLETAIRFFEDMKSRGISLDVV 197
                                              +SL+ E      E M+S  + +D +
Sbjct: 337 GWEVVFVRKALKAVAKLDCSGELLELSSLASGCSNMSLQQEAERLLDEMMRSNLLPIDAI 396

Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
             N MI       ++D +  L  ++     EP+V++Y  +IK     +R DDA  + + M
Sbjct: 397 L-NMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLM 455

Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
           +S  V+P+  T + ++   C  G +     +  EM +  + P   +V+  ++   C+ GH
Sbjct: 456 QSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSI-AVYDSIIACLCRLGH 514

Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
              A   L+ MI   +  +   Y  L+  +        A ++ D+++E+   L+P S   
Sbjct: 515 FKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERG--LQPGS--- 569

Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEI 436
               +Y  +I  L  + +  KA  +  +++++G     V +  LI    ++G      ++
Sbjct: 570 ---HAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTMLINQFFRKGEEWLGLDL 626

Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF- 495
           V +M +  V  D   Y  L+    R  +  D + +L + +++       LFR + +  F 
Sbjct: 627 VDLMMKNHVEPDLITYGALVTGICRNIDRRDMRPSLAAKLDEARY---MLFRLLPQISFG 683

Query: 496 ------------EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
                        + ++  A  +++ +VE G+  +L +   +L  L     +++A   + 
Sbjct: 684 TRKGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLS 743

Query: 544 LMMQSGSVPN--------------------------------------FDSLLSVLSEKG 565
           LM QSG +PN                                      +++ +  LS   
Sbjct: 744 LMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLAR 803

Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
           +T  A+        R  +   A+Y+K+++ LLA   T  A +I   +   G +  + +  
Sbjct: 804 RTKEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSNYS 863

Query: 626 KLIAGLNQEGNTKQAD 641
            L+  L ++   ++ D
Sbjct: 864 SLLLVLAKDNQWREVD 879



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 133/674 (19%), Positives = 263/674 (39%), Gaps = 100/674 (14%)

Query: 55  DRETHLKMIEILGRVGKLNHARCILLDM-PKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
           DR     +++ L + G+L  A  +   M   +G Q D   +  +I    + G V    ++
Sbjct: 182 DRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYVDHGWEL 241

Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
           +  MK  G+E +  +Y+ +     +      A   +N M+  G+ P    Y +++     
Sbjct: 242 YQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTMLMTSLCK 301

Query: 174 SLKLETAIRFFEDMKSRGISLDVVTY---------------------------------- 199
             KL  A + F  M  RG+  D V +                                  
Sbjct: 302 EGKLVEAEQLFTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDCSGELLE 361

Query: 200 -NTMINGYNRFKKMDEAEKLFAEMKEKNI------------------------------- 227
            +++ +G +      EAE+L  EM   N+                               
Sbjct: 362 LSSLASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLV 421

Query: 228 ----EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMV 283
               EP+V++Y  +IK     +R DDA  + + M+S  V+P+  T + ++   C  G + 
Sbjct: 422 AYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIE 481

Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGIL 343
               +  EM +  + P   +V+  ++   C+ GH   A   L+ MI   +  +   Y  L
Sbjct: 482 SALSLFDEMAKDGLEPS-IAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTL 540

Query: 344 IENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFF 403
           +  +        A ++ D+++E+   L+P S       +Y  +I  L  + +  KA  + 
Sbjct: 541 LNGYSTMRHTKAACRVFDEMLERG--LQPGS------HAYGALINGLVKDNKIRKALHYL 592

Query: 404 RQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
            +++++G     V +  LI    ++G      ++V +M +  V  D   Y  L+    R 
Sbjct: 593 ERMLEEGFATQTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRN 652

Query: 463 GEPADAKTALDSMIEDGHSPASSLFRSVMESLF-------------EDGRVQTASRVMKS 509
            +  D + +L + +++       LFR + +  F              + ++  A  +++ 
Sbjct: 653 IDRRDMRPSLAAKLDEAR---YMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQD 709

Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEK---GK 566
           +VE G+  +L +   +L  L     +++A   + LM QSG +PN  +   +++     G 
Sbjct: 710 LVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGD 769

Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
           +  A++L +       + D   Y   +  L  A +T  A S    + ++G V    + DK
Sbjct: 770 SNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDK 829

Query: 627 LIAGLNQEGNTKQA 640
           ++  L  E +T  A
Sbjct: 830 IMEQLLAENSTDLA 843



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 110/541 (20%), Positives = 220/541 (40%), Gaps = 35/541 (6%)

Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
           DAL       G    A   F+ ++     P+  +   +L     +      +  F   + 
Sbjct: 47  DALVACHSHLGNIASALTCFDHLIESRYVPSPASSAALLRAMCAASMYSEVVDLFVLWEG 106

Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
               L V  +  +I+G      +D+A  LF  M    + P V  Y +++  Y    R+ +
Sbjct: 107 APSPLPVSKFPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKARRSLE 166

Query: 250 ALRIFDEMKSFDVKP----NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVF 305
           A    DEM    VK     + +  TAL+ GLC  G++     V   M        D   +
Sbjct: 167 A----DEMCCLMVKNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAY 222

Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
             ++G   + G+++   ++ + M    +      Y +++  +CK +    A++L +    
Sbjct: 223 TTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYN---- 278

Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
             +++R   + D+    Y  ++  LC  G+  +AE  F +++++GV  D V F ++ R  
Sbjct: 279 --VMVRGGVSPDLRC--YTMLMTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISIARFF 334

Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE-SYLRKGEP-----ADAKTALDSMIED 478
            K       +E+V +          D    L+E S L  G        +A+  LD M+  
Sbjct: 335 PK------GWEVVFVRKALKAVAKLDCSGELLELSSLASGCSNMSLQQEAERLLDEMMRS 388

Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
              P  ++   ++ ++  +GR+  +  ++  +V  G + ++     +++ L  +  +++A
Sbjct: 389 NLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDA 448

Query: 539 LGRIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDA 595
              I+LM   G  P+  +   +++   + G   +A+ L D          +A Y+ ++  
Sbjct: 449 RTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIAC 508

Query: 596 LLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGS 655
           L   G    A   L +++E G V D      L+ G +   +TK A    R+    + RG 
Sbjct: 509 LCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAA---CRVFDEMLERGL 565

Query: 656 Q 656
           Q
Sbjct: 566 Q 566


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.136    0.389 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,625,852,752
Number of Sequences: 23463169
Number of extensions: 390894936
Number of successful extensions: 1286855
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7902
Number of HSP's successfully gapped in prelim test: 4879
Number of HSP's that attempted gapping in prelim test: 1059312
Number of HSP's gapped (non-prelim): 78111
length of query: 662
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 513
effective length of database: 8,863,183,186
effective search space: 4546812974418
effective search space used: 4546812974418
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)