BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006071
(662 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUU3|PP190_ARATH Pentatricopeptide repeat-containing protein At2g37230
OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1
Length = 757
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/650 (73%), Positives = 564/650 (86%), Gaps = 2/650 (0%)
Query: 1 MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
M RAWTTRLQN IR LVP++DH+LVYNVLHGAK EHALQFFRW ER+GL HDR+TH+
Sbjct: 95 MDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHM 154
Query: 61 KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
KMI++LG V KLNHARCILLDMP+KGV WDEDMF VLIESYGK GIVQESVKIF MK L
Sbjct: 155 KMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDL 214
Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
GVER++KSY++LFK+ILRRGRYMMAKRYFNKM+SEG+EPTRHTYN+MLWGFFLSL+LETA
Sbjct: 215 GVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETA 274
Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
+RFFEDMK+RGIS D T+NTMING+ RFKKMDEAEKLF EMK I P+V+SYTTMIKG
Sbjct: 275 LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKG 334
Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
Y+AV+R DD LRIF+EM+S ++PNA TY+ LLPGLCDAGKMVE + +L+ M+ ++I PK
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPK 394
Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
DNS+F+KLL Q K+G + AA +VLKAM L++P EAGHYG+LIEN CKA Y+RAIKLL
Sbjct: 395 DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLL 454
Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNL 420
D L+EKEIILR Q TL+ME S+YNP+I++LC+NGQT KAE+ FRQLMK+GV D A NNL
Sbjct: 455 DTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNL 514
Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
IRGH+KEGNPDS++EI+KIM RRGVPR+++AY LI+SY+ KGEP DAKTALDSM+EDGH
Sbjct: 515 IRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGH 574
Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEK--GVKENLDLVAKILEALLMRGHVEEA 538
P SSLFRSV+ESLFEDGRVQTASRVM M++K G+++N+DL+AKILEALLMRGHVEEA
Sbjct: 575 VPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEA 634
Query: 539 LGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLA 598
LGRIDL+ Q+G + DSLLSVLSEKGKTIAA+KLLDF L RD ++ +SY+KVLDALL
Sbjct: 635 LGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLG 694
Query: 599 AGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
AGKTLNAYS+L KIMEKG TDWKSSD+LI LNQEGNTKQAD+LSRMI+
Sbjct: 695 AGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQADVLSRMIK 744
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/616 (32%), Positives = 338/616 (54%), Gaps = 13/616 (2%)
Query: 39 ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG---VQWDEDMFE 95
L+FF WV G F+H ++ M+E LGR LN AR L + ++ V+ + F
Sbjct: 84 GLRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 96 VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML-S 154
LI SYG G+ QESVK+F MKQ+G+ SV ++++L ++L+RGR MA F++M +
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
G+ P +T+N ++ GF + ++ A R F+DM+ + DVVTYNT+I+G R K+
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 215 AEKLFAEM--KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
A + + M K ++ P V+SYTT+++GY + D+A+ +F +M S +KPNAVTY L
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 273 LPGLCDAGKMVEVQKVL---REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
+ GL +A + E++ +L + + P D F L+ C +GHL+AA V + M+
Sbjct: 323 IKGLSEAHRYDEIKDILIGGNDAFTTFAP--DACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
+ + ++ Y +LI C +DRA L ++L EKE++L + A++YNPM ++
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL-AAAYNPMFEY 439
Query: 390 LCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
LC NG+T +AE FRQLMK+GV DP ++ LI GH +EG A+E++ +M RR D
Sbjct: 440 LCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL 499
Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
+ Y LI+ L+ GE A L M+ + P ++ F SV+ L + + ++
Sbjct: 500 ETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTL 559
Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIA 569
M+EK +++N+DL +++ L E+A + L+ +G + + LL L E K +
Sbjct: 560 MLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLD 619
Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
A L+ FCL + ++D+ + V++ L + A+S+ +++E G L
Sbjct: 620 AHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRN 679
Query: 630 GLNQEGNTKQADILSR 645
L G ++ +S+
Sbjct: 680 ALEAAGKWEELQFVSK 695
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 174/704 (24%), Positives = 301/704 (42%), Gaps = 94/704 (13%)
Query: 26 VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
V V+ K+ AL+ F + + F H T+ +IE LG GK +L+DM +
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 86 -GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
G E ++ +++YG+KG VQE+V +F+ M E +V SY+A+ +++ G +
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
A + + +M GI P +++ + + F + + A+R +M S+G ++VV Y T++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 205 ----------GYNRFKKM-------------------------DEAEKLFAEMKEKNIEP 229
GY F KM E EKL ++ ++ + P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
+ +Y I+G D A+R+ + KP+ +TY L+ GLC K E + L
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
+MV + P D+ + L+ CK G + A ++ + + Y LI+ C
Sbjct: 310 GKMVNEGLEP-DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
+RA+ L ++ + K I +P L YN +I+ L + G +A ++ +K
Sbjct: 369 EGETNRALALFNEALGKGI--KPNVIL------YNTLIKGLSNQGMILEAAQLANEMSEK 420
Query: 410 GVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
G++ V FN L+ G K G A +VK+M +G D + LI Y + + +A
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
LD M+++G P + S++ L + + + K+MVEKG NL +LE+
Sbjct: 481 LEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLES 540
Query: 529 LLMRGHVEEALGRIDLMMQ---------------------------------------SG 549
L ++EALG ++ M S
Sbjct: 541 LCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS 600
Query: 550 SVPNFDSLLSVLSEKGKTIAAVKL----LDFCLGRDCIIDLASYEKVLDALLAAGKTLNA 605
S P ++ ++ +EK A KL +D CLG D +Y ++D G
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY----TYRLMVDGFCKTGNVNLG 656
Query: 606 YSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQ-ADILSRMIR 648
Y L ++ME G + + ++I L E + A I+ RM++
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/543 (24%), Positives = 247/543 (45%), Gaps = 17/543 (3%)
Query: 58 THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
T K++ +L + G + +L + K+GV + + + I+ ++G + +V++ +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
+ G + V +Y+ L + + ++ A+ Y KM++EG+EP +TYN ++ G+ +
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
+ A R D G D TY ++I+G + + A LF E K I+P VI Y T+
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVER-Y 296
IKG +A ++ +EM + P T+ L+ GLC G + + +++ M+ + Y
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 297 IPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
P D F L+ + A ++L M+ + + Y L+ CK ++
Sbjct: 458 FP--DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
++ +VEK P ++N +++ LC + +A ++ K V D V
Sbjct: 516 METYKTMVEKGC--APN------LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGR-RGVPRDADAYICLIESYLRKGEPADAKTALDS 474
F LI G K G+ D A+ + + M V Y +I ++ K A+
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
M++ P +R +++ + G V + + M+E G +L + +++ L +
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 535 VEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKL-LDFCLGRDCIIDLASYEKVL 593
V EA G I M+Q G VP +++ ++ K +AA KL L+ L + CI A YE +
Sbjct: 688 VYEAAGIIHRMVQKGLVP--EAVNTICDVDKKEVAAPKLVLEDLLKKSCITYYA-YELLF 744
Query: 594 DAL 596
D L
Sbjct: 745 DGL 747
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 189/405 (46%), Gaps = 12/405 (2%)
Query: 26 VYNVLHGAKNSEHALQFFRWVERAGLFNH---DRETHLKMIEILGRVGKLNHARCILLDM 82
YN L +Q + +FN D+ T+ +I+ L G+ N A + +
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
KG++ + ++ LI+ +G++ E+ ++ + M + G+ V++++ L + + G
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
A M+S+G P T+N+++ G+ LK+E A+ + M G+ DV TYN++
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
+NG + K ++ + + M EK P + ++ +++ + D+AL + +EMK+ V
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
P+AVT+ L+ G C G + + R+M E Y + ++ + ++ A
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
+ + M+ + + Y ++++ FCK + K L +++E I P T +
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI--PSLT------T 674
Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKE 427
+I LC + +A ++++KG++ P A N + KE
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLV-PEAVNTICDVDKKE 718
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 151/636 (23%), Positives = 289/636 (45%), Gaps = 71/636 (11%)
Query: 39 ALQFFRWVERAGLFNHDRETHLKMIEIL---GRVGKLNHARCIL-------------LDM 82
AL F W+ + + H ++ ++ +L G VG + R ++ LD+
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDL 165
Query: 83 PKKGVQWDE----------DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
+K + DE + L+ S + G+V E +++ M + V ++ +Y+ +
Sbjct: 166 CRK-MNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKM 224
Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
+ G A +Y +K++ G++P TY ++ G+ L++A + F +M +G
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC 284
Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
+ V Y +I+G +++DEA LF +MK+ PTV +YT +IK ER +AL
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
+ EM+ +KPN TYT L+ LC K + +++L +M+E+ + P + + L+
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP-NVITYNALINGY 403
Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
CK G + A DV++ M + Y LI+ +CK+ ++ +A+ +L+K++E++++
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVL--- 459
Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPD 431
+ +YN +I C +G A + +G++ D + ++I K +
Sbjct: 460 -----PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
A ++ + ++GV + Y LI+ Y + G+ +A L+ M+ P S F +++
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
L DG+++ A+ + + MV+ G++ + ++ LL G + A R M+ SG+
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
P D +Y + G+ L+A ++ K
Sbjct: 635 P--------------------------------DAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
+ E G D + LI G G T A D+L RM
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 145/595 (24%), Positives = 266/595 (44%), Gaps = 26/595 (4%)
Query: 58 THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
T+ KM+ ++G + A + + + G+ D + LI Y ++ + + K+F+ M
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
G R+ +Y L + R A F KM + PT TY V++ S +
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
A+ ++M+ GI ++ TY +I+ K ++A +L +M EK + P VI+Y +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
I GY +DA+ + + M+S + PN TY L+ G C + + + VL +M+ER +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKV 458
Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
P D + L+ QC+SG+ ++A +L M + + Y +I++ CK++ + A
Sbjct: 459 LP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVA 416
L D L +K + P + Y +I C G+ +A + +++ K L + +
Sbjct: 518 DLFDSLEQKGV--NPNVVM------YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
FN LI G +G A + + M + G+ LI L+ G+ A + M+
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
G P + + + +++ +GR+ A +M M E GV +L + +++ G
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 537 EALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
A + M +G P+ + LS++ LL+ G+ E L A+
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKH---------LLEMKYGKQ-----KGSEPELCAM 735
Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGE 650
+ +L K++E + KS +KLI G+ + GN + A+ + M R E
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 135/580 (23%), Positives = 255/580 (43%), Gaps = 74/580 (12%)
Query: 30 LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
L G++ AL + +E G+ + T+ +I+ L K AR +L M +KG+
Sbjct: 333 LCGSERKSEALNLVKEMEETGI-KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 90 DEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYF 149
+ + LI Y K+G+++++V + ++M+ + + ++Y+ L K + + A
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVL 450
Query: 150 NKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
NKML + P TYN ++ G S ++A R M RG+ D TY +MI+ +
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
K+++EA LF +++K + P V+ YT +I GY + D+A + ++M S + PN++T+
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPK---DNSVFMKLLGVQCKSGHLNAAADVLK 326
AL+ GLC GK+ E + +MV+ + P D + +LL K G + A +
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL----KDGDFDHAYSRFQ 626
Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
M+ +A Y I+ +C R +LLD E + ++ + + +Y+ +
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYC------REGRLLD--AEDMMAKMRENGVSPDLFTYSSL 678
Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIR-------GHSKEGNP------- 430
I+ GQT A +++ G +P F +LI+ G K P
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGC-EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 431 ----DSAFEIVKIMGRRGVPRDADAY------IC-------------------------- 454
D+ E+++ M V +A +Y IC
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 455 ----LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
L+ + + +A +D MI GH P + ++ L++ G + + V +++
Sbjct: 798 VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGS 550
++ G E+ I++ + +G VE ++M ++G
Sbjct: 858 LQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGC 897
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 197/458 (43%), Gaps = 64/458 (13%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D T+ +I+ R G + A +L M +G+ D+ + +I+S K V+E+ +F
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
D ++Q GV +V Y AL + G+ A KMLS+ P T+N ++ G
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 175 LKLETAIRF-----------------------------------FEDMKSRGISLDVVTY 199
KL+ A F+ M S G D TY
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
T I Y R ++ +AE + A+M+E + P + +Y+++IKGY + + + A + M+
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 260 FDVKPNAVTYTALL---------------PGLCDAGKMVE---VQKVLREMVERYIPPKD 301
+P+ T+ +L+ P LC M+E V ++L +MVE + P
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 760
Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIR-LSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
S +LG+ C+ G+L A V M R I + L+ CK + ++ A K++
Sbjct: 761 KSYEKLILGI-CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
D ++ + PQ S +I L G+ + F+ L++ G D +A+
Sbjct: 820 DDMI--CVGHLPQ------LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKI 871
Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
+I G K+G ++ +E+ +M + G + Y LIE
Sbjct: 872 IIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 40.4 bits (93), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 78 ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLI 136
+L M + V + +E LI + G ++ + K+FD M + G+ S ++AL
Sbjct: 747 LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
+ ++ A + + M+ G P + V++ G + + E F+++ G D
Sbjct: 807 CKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDE 866
Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
+ + +I+G + ++ +LF M++ + + +Y+ +I+G
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 247/518 (47%), Gaps = 13/518 (2%)
Query: 61 KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
K++ + ++ K + + M G+ + + +LI + ++ + ++ + M +L
Sbjct: 86 KLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL 145
Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
G E ++ + +L R A ++M G +P T+N ++ G FL K A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
+ + M ++G D+VTY ++NG + D A L +M++ +EP V+ Y T+I G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
+ DDAL +F EM++ ++PN VTY++L+ LC+ G+ + ++L +M+ER I P
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP- 324
Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
D F L+ K G L A + M++ SI Y LI FC + D A ++
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
+ +V K P + +YN +I+ C + + FR++ ++G++ + V +N
Sbjct: 385 EFMVSKHCF--P------DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
LI+G + G+ D A EI K M GVP + Y L++ + G+ A + +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
P + ++E + + G+V+ + ++ KGVK ++ ++ +G EEA
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
M + G++PN +++L+ G A+ +L+
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 222/490 (45%), Gaps = 31/490 (6%)
Query: 54 HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
H+ T+ +I R +L A +L M K G + + L+ Y + E+V +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
D M G + + +++ L + + A ++M+++G +P TY V++ G
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
+ A M+ + V+ YNT+I+G ++K MD+A LF EM+ K I P V++
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
Y+++I R DA R+ +M + P+ T++AL+ GK+VE +K+ EMV
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
+R I P + + L+ C L+ A + + M+ + Y LI+ FCK +
Sbjct: 354 KRSIDPSIVT-YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 354 DRAIKLLDKLVEKEII------------LRPQSTLDMEAS---------------SYNPM 386
+ +++ ++ ++ ++ L DM +YN +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
+ LC NG+ KA + F + +++ ++P +N +I G K G + +++ + +G
Sbjct: 473 LDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
V D AY +I + RKG +A M EDG P S + +++ + DG + ++
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 505 RVMKSMVEKG 514
++K M G
Sbjct: 592 ELIKEMRSCG 601
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 188/372 (50%), Gaps = 11/372 (2%)
Query: 93 MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
++ +I+ K + +++ +F M+ G+ +V +Y +L + GR+ A R + M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
+ I P T++ ++ F KL A + +++M R I +VTY+++ING+ ++
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
DEA+++F M K+ P V++Y T+IKG+ +R ++ + +F EM + N VTY L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
+ GL AG Q++ +EMV +PP + + LL CK+G L A V + + R
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPP-NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
+ Y I+IE CKA + L L K + +P + +YN MI C
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV--KP------DVVAYNTMISGFCR 548
Query: 393 NGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
G +A+ F+++ + G L + +N LIR ++G+ +++ E++K M G DA
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Query: 452 YICLIESYLRKG 463
I L+ + L G
Sbjct: 609 -IGLVTNMLHDG 619
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/539 (20%), Positives = 233/539 (43%), Gaps = 44/539 (8%)
Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
+ ++V +F M + S+ + L I + ++ + +M + GI +TY++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
++ F +L A+ M G ++VT ++++NGY K++ EA L +M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
+P +++ T+I G +A +A+ + D M + +P+ VTY ++ GLC G
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
+L +M + + P ++ ++ CK H++ A ++ K M I Y LI
Sbjct: 242 NLLNKMEQGKLEP-GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
C + A +LL ++E++I + + +++ +I G+ +AE + ++
Sbjct: 301 LCNYGRWSDASRLLSDMIERKI--------NPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 407 MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
+K+ + DP V +++LI G D A ++ + M + D Y LI+ + +
Sbjct: 353 VKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
+ M + G + + +++ LF+ G A + K MV GV N+
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
+L+ L G +E+A+ + + +S P
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPT------------------------------- 500
Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
+ +Y +++ + AGK + + + + KG D + + +I+G ++G+ ++AD L
Sbjct: 501 -IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 182/377 (48%), Gaps = 11/377 (2%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+N + + L K+ + AL F+ +E G+ + T+ +I L G+ + A +L DM
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
++ + D F LI+++ K+G + E+ K++D M + ++ S+ +Y +L R
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
AK+ F M+S+ P TYN ++ GF ++E + F +M RG+ + VTYN +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
I G + D A+++F EM + P +++Y T++ G + + A+ +F+ ++ +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
+P TY ++ G+C AGK+ + + + + + P D + ++ C+ G A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP-DVVAYNTMISGFCRKGSKEEAD 556
Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
+ K M +G Y LI +A + D D+ E+I +S +S
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLI----RARLRDG-----DREASAELIKEMRSCGFAGDAS 607
Query: 383 YNPMIQHLCHNGQTGKA 399
++ ++ H+G+ K+
Sbjct: 608 TIGLVTNMLHDGRLDKS 624
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 157/658 (23%), Positives = 299/658 (45%), Gaps = 40/658 (6%)
Query: 11 QNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGL----FNHDRETHLKMIEIL 66
N +R + + + V VL+ +N Q R+V++ G F H + MI IL
Sbjct: 66 NNNVRNHLIRLNPLAVVEVLYRCRNDLTLGQ--RFVDQLGFHFPNFKHTSLSLSAMIHIL 123
Query: 67 GRVGKLNHARCILLDMPKK-GVQ----------------WDEDMFEVLIESYGKKGIVQE 109
R G+L+ A+ LL M ++ GV ++ +F++LI +Y + ++E
Sbjct: 124 VRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLRE 183
Query: 110 SVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLW 169
+ + F +++ G S+ + +AL ++R G +A + ++ G+ +T N+M+
Sbjct: 184 AHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVN 243
Query: 170 GFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEP 229
K+E F ++ +G+ D+VTYNT+I+ Y+ M+EA +L M K P
Sbjct: 244 ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP 303
Query: 230 TVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL 289
V +Y T+I G + + A +F EM + P++ TY +LL C G +VE +KV
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 290 REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCK 349
+M R + P D F ++ + +SG+L+ A ++ + + Y ILI+ +C+
Sbjct: 364 SDMRSRDVVP-DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 350 AEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKK 409
M A+ L ++++ Q M+ +YN ++ LC G+A+ F ++ ++
Sbjct: 423 KGMISVAMNLRNEML--------QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 410 GVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADA 468
+ D LI GH K GN +A E+ + M + + D Y L++ + + G+ A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
K M+ P + ++ +L G + A RV M+ K +K + + +++
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 529 LLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL------SEKGKTIAAVKLLDFCLGRDC 582
G+ + ++ M+ G VP+ S +++ K VK ++ G
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG-GL 653
Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
+ D+ +Y +L + A +L K++E+G D + +I G + N +A
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 231/495 (46%), Gaps = 12/495 (2%)
Query: 62 MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
M+ L + GK+ L + +KGV D + LI +Y KG+++E+ ++ + M G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
V +Y+ + + + G+Y AK F +ML G+ P TY +L +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
+ F DM+SR + D+V +++M++ + R +D+A F +KE + P + YT +I+GY
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
A+ + +EM + VTY +L GLC + E K+ EM ER + P D
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP-D 479
Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
+ L+ CK G+L A ++ + M I + Y L++ F K D A ++
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-NNL 420
+V KEI+ P SY+ ++ LC G +A + +++ K + V N++
Sbjct: 540 DMVSKEILPTP--------ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIED-- 478
I+G+ + GN ++ M G D +Y LI ++R+ + A + M E+
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 479 GHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
G P + S++ +++ A V++ M+E+GV + ++ + + ++ EA
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 539 LGRIDLMMQSGSVPN 553
D M+Q G P+
Sbjct: 712 FRIHDEMLQRGFSPD 726
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 214/465 (46%), Gaps = 17/465 (3%)
Query: 25 LVYNVLHGAKNS----EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
+ YN L A +S E A + + G F+ T+ +I L + GK A+ +
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 81 DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
+M + G+ D + L+ KKG V E+ K+F M+ V + + ++ L R G
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
A YFN + G+ P Y +++ G+ + A+ +M +G ++DVVTYN
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
T+++G + K + EA+KLF EM E+ + P + T +I G+ + +A+ +F +MK
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
++ + VTY LL G G + +++ +MV + I P S + L+ C GHL
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS-YSILVNALCSKGHLAE 568
Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
A V MI +I +I+ +C++ L+K++ + + P +
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV--P------DC 620
Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKG---VLDPVAFNNLIRGHSKEGNPDSAFEIV 437
SYN +I KA +++ ++ V D +N+++ G ++ A ++
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
+ M RGV D Y C+I ++ + +A D M++ G SP
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 122/233 (52%), Gaps = 3/233 (1%)
Query: 35 NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMF 94
N ++A++ F+ ++ + D T+ +++ G+VG ++ A+ I DM K + +
Sbjct: 495 NLQNAMELFQKMKEKRI-RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 95 EVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLS 154
+L+ + KG + E+ +++D M ++ +V +++ K R G + + KM+S
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR--GISLDVVTYNTMINGYNRFKKM 212
EG P +YN +++GF + A + M+ G+ DV TYN++++G+ R +M
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
EAE + +M E+ + P +YT MI G+V+ + +A RI DEM P+
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 7/283 (2%)
Query: 25 LVYN-VLHGA---KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
+ YN +LHG K A + F + LF D T +I+ ++G L +A +
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 81 DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
M +K ++ D + L++ +GK G + + +I+ M + + SY L + +G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
A R +++M+S+ I+PT N M+ G+ S F E M S G D ++YN
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKN--IEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
T+I G+ R + M +A L +M+E+ + P V +Y +++ G+ + +A + +M
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
V P+ TYT ++ G + E ++ EM++R P D
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 235/492 (47%), Gaps = 13/492 (2%)
Query: 87 VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAK 146
+ +D + +LI + ++ + ++ + M +LG E + + +L R A
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
++M +P T+N ++ G FL K A+ + M +RG D+ TY T++NG
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
+ +D A L +M++ IE V+ YTT+I + +DAL +F EM + ++PN
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
VTY +L+ LC+ G+ + ++L +M+ER I P + F L+ K G L A +
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
MI+ SI + Y LI FC + D A + + ++ K+ P +YN +
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVV------TYNTL 401
Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
I+ C + + FR++ ++G++ + V +N LI+G + G+ D A +I K M GV
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
P D Y L++ + G+ A + + + P + ++E + + G+V+
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
+ S+ KGVK N+ + ++ +G EEA M + G++PN +++L+
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 563 EKGKTIAAVKLL 574
G A+ +L+
Sbjct: 582 RDGDKAASAELI 593
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 208/428 (48%), Gaps = 12/428 (2%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+ L++ + K SE R V R D T+ ++ L + G ++ A +L M
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGC--QPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
K ++ D ++ +I++ V +++ +F M G+ +V +Y++L + + GR+
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
A R + M+ I P T++ ++ F KL A + +++M R I D+ TY+++
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
ING+ ++DEA+ +F M K+ P V++Y T+IKG+ +R ++ + +F EM +
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
N VTY L+ GL AG QK+ ++MV +PP D + LL CK G L A
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-DIITYSILLDGLCKYGKLEKAL 485
Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
V + + + + + Y I+IE CKA + L L K + +P +
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV--KPNVII------ 537
Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
Y MI C G +A+ FR++ + G L + +N LIR ++G+ ++ E++K M
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 442 RRGVPRDA 449
G DA
Sbjct: 598 SCGFVGDA 605
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 229/514 (44%), Gaps = 30/514 (5%)
Query: 53 NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
++D ++ +I R +L A +L M K G + D L+ Y + E+V
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
+ D M + + + +++ L + + A ++M++ G +P TY ++ G
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
++ A+ + M+ I DVV Y T+I+ +K +++A LF EM K I P V+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
+Y ++I+ R DA R+ +M + PN VT++AL+ GK+VE +K+ EM
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
++R I P D + L+ C L+ A + + MI Y LI+ FCKA+
Sbjct: 352 IKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 353 YDRAIKLLDKLVEKEII------------LRPQSTLDM---------------EASSYNP 385
+ ++L ++ ++ ++ L DM + +Y+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 386 MIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
++ LC G+ KA + F L K K D +N +I G K G + +++ + +G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
V + Y +I + RKG +A M EDG P S + +++ + DG ++
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 505 RVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
++K M G + ++ ++ +L G +E++
Sbjct: 591 ELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 623
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/541 (20%), Positives = 232/541 (42%), Gaps = 44/541 (8%)
Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
+ ++V +F M Q S+ ++ L I + ++ + +M + I ++YN+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
++ F +L A+ M G D+VT ++++NGY K++ EA L +M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
+P +++ T+I G +A +A+ + D M + +P+ TY ++ GLC G +
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
+L++M E+ D ++ ++ C ++N A ++ M I Y LI
Sbjct: 241 SLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
C + A +LL ++E++I + +++ +I G+ +AE + ++
Sbjct: 300 LCNYGRWSDASRLLSDMIERKI--------NPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 407 MKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
+K+ + DP +++LI G D A + ++M + + Y LI+ + +
Sbjct: 352 IKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
+ M + G + + ++++ LF+ G A ++ K MV GV ++ +
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
+L+ L G +E+AL + + +S P
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEP-------------------------------- 498
Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILS 644
D+ +Y +++ + AGK + + + + KG + +I+G ++G ++AD L
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 645 R 645
R
Sbjct: 559 R 559
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 129/577 (22%), Positives = 232/577 (40%), Gaps = 54/577 (9%)
Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY-FNKMLSEGIEPTRHT 163
GIV K + K+ ++ LF L RG Y A Y + + LS +
Sbjct: 8 GIVASQSKKMSLAKRFA---QLRKASPLFSL---RGVYFSAASYDYREKLSRNV------ 55
Query: 164 YNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
L LKL+ A+ F +M +SR + +V +N +++ + K D L M
Sbjct: 56 --------LLDLKLDDAVDLFGEMVQSRPLP-SIVEFNKLLSAIAKMNKFDLVISLGERM 106
Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
+ I + SY +I + + AL + +M +P+ VT ++LL G C ++
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166
Query: 283 VEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
E ++ +M V Y P + F L+ + A ++ M+ + YG
Sbjct: 167 SEAVALVDQMFVMEYQP--NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
++ CK D A+ LL K+ + +I + + Y +I LC+ A
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKI--------EADVVIYTTIIDALCNYKNVNDALN 276
Query: 402 FFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
F ++ KG+ + V +N+LIR G A ++ M R + + + LI++++
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
++G+ +A+ D MI+ P + S++ R+ A + + M+ K N+
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
+++ VEE + M Q G V N +++L+ L + G A K+
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSIL--------------FKIMEKGGVTDWKS 623
+ D+ +Y +LD L GK A + + IM +G K
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 624 SD--KLIAGLNQEGNTKQADILSRMIRGEMSRGSQKE 658
D L L+ +G I + MI G +G ++E
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 137/548 (25%), Positives = 252/548 (45%), Gaps = 48/548 (8%)
Query: 97 LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
L+E K+G ++E++ + + GV ++ Y+AL + + ++ A+ F++M G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
+ P TY++++ F KL+TA+ F +M G+ L V YN++ING+ +F + AE
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
AEM K +EPTV++YT+++ GY + + + ALR++ EM + P+ T+T LL GL
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
AG + + K+ EM E + P R++
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPN-----------------------------RVT---- 544
Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
Y ++IE +C+ +A + L ++ EK I+ P + SY P+I LC GQ
Sbjct: 545 ---YNVMIEGYCEEGDMSKAFEFLKEMTEKGIV--P------DTYSYRPLIHGLCLTGQA 593
Query: 397 GKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
+A++F L K L+ + + L+ G +EG + A + + M +RGV D Y L
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
I+ L+ + L M + G P ++ S++++ + G + A + M+ +G
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
N ++ L G V EA M SVPN + L +L++ +
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV 773
Query: 573 LLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLN 632
L + + + + A+Y ++ G+ A ++ +++ G D + +I L
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 633 QEGNTKQA 640
+ + K+A
Sbjct: 834 RRNDVKKA 841
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/553 (23%), Positives = 249/553 (45%), Gaps = 16/553 (2%)
Query: 94 FEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
F++LI+ Y + V + V +F +M ++ + V++ AL +++ + +A FN M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
+S GI P + Y ++ L A M++ G +++V YN +I+G + +K+
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
EA + ++ K+++P V++Y T++ G V+ + L + DEM P+ ++L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
+ GL GK+ E +++ +V+ + P + V+ L+ CK + A + M ++
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSP-NLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
+ Y ILI+ FC+ D A+ L ++V+ + L + YN +I C
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD--------TGLKLSVYPYNSLINGHCK 449
Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
G AE F +++ K L+P V + +L+ G+ +G + A + M +G+
Sbjct: 450 FGDISAAEGFMAEMINKK-LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
+ L+ R G DA + M E P + ++E E+G + A +K M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
EKG+ + ++ L + G EA +D + + N + LL +GK
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKL 627
A+ + + R +DL Y ++D L + +L ++ ++G D +
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 628 IAGLNQEGNTKQA 640
I ++ G+ K+A
Sbjct: 689 IDAKSKTGDFKEA 701
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/535 (24%), Positives = 225/535 (42%), Gaps = 52/535 (9%)
Query: 25 LVYNVL-----HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCIL 79
VYN L G K E L F R + + GL +D T+ +I++ R GKL+ A L
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDR-MGKIGLRPNDV-TYSILIDMFCRRGKLDTALSFL 425
Query: 80 LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
+M G++ + LI + K G + + M +E +V +Y +L +
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
G+ A R +++M +GI P+ +T+ +L G F + + A++ F +M + + VTY
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
N MI GY M +A + EM EK I P SY +I G +A +A D +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 260 FDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP--------------------- 298
+ + N + YT LL G C GK+ E V +EMV+R +
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 299 -------------PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRL-SIPTEAGHYGILI 344
D+ ++ ++ + K+G A + MI +P E Y +I
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVI 724
Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
CKA + A L K ++P S++ + +Y + L + +
Sbjct: 725 NGLCKAGFVNEAEVLCSK-------MQPVSSVPNQV-TYGCFLDILTKGEVDMQKAVELH 776
Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
+ KG+L + +N LIRG ++G + A E++ M GV D Y +I R+
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
+ A +SM E G P + +++ G + A+ + M+ +G+ N
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D + MI+ + G A I M +G +E + +I K G V E+ +
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRY-FNKMLSEGIEPTRHTYNVMLWGFFL 173
M+ + + +Y F IL +G M K + + +G+ TYN+++ GF
Sbjct: 741 SKMQPVSSVPNQVTY-GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCR 799
Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
++E A M G+S D +TY TMIN R + +A +L+ M EK I P ++
Sbjct: 800 QGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859
Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
Y T+I G A + +EM + PN T
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 227/491 (46%), Gaps = 31/491 (6%)
Query: 53 NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
+HD T+ I R +L+ A +L M K G + D L+ Y + ++V
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
+ D M ++G + ++ L + + A ++M+ G +P TY ++ G
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
++ A+ + M+ I DVV YNT+I+G ++K MD+A LF EM K I P V
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
+Y+++I R DA R+ +M + PN VT++AL+ GK+VE +K+ EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
++R I P D + L+ C L+ A + + MI Y LI+ FCKA+
Sbjct: 355 IKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 353 YDRAIKLLDKLVEK-------------------------EIILRPQSTLDMEAS--SYNP 385
+ ++L ++ ++ +++ + ++ + + +YN
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
++ LC NG+ KA + F L ++ ++P +N +I G K G + +E+ + +
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYL-QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
GV + AY +I + RKG +A + L M EDG P S + +++ + DG + +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 504 SRVMKSMVEKG 514
+ ++K M G
Sbjct: 593 AELIKEMRSCG 603
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 239/518 (46%), Gaps = 16/518 (3%)
Query: 64 EILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
++L V K+N ++ M G+ D + + I + ++ + ++ + M +L
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
G E + + +L R A ++M+ G +P T+ ++ G FL K A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
+ + M RG D+VTY T++NG + +D A L +M++ IE V+ Y T+I G
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
+ DDAL +F EM + ++P+ TY++L+ LC+ G+ + ++L +M+ER I P
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP- 326
Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
+ F L+ K G L A + MI+ SI + Y LI FC + D A +
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
+ ++ K+ P +Y+ +I+ C + + FR++ ++G++ + V +
Sbjct: 387 ELMISKDCF--PN------VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
LI G + + D+A + K M GV + Y L++ + G+ A A + +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
P + ++E + + G+V+ + ++ KGV N+ ++ +G EEA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
+ M + G +PN +++L+ G A+ +L+
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596
Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 213/441 (48%), Gaps = 13/441 (2%)
Query: 24 NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
L++ + K SE + V+R D T+ ++ L + G ++ A +L M
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGC--QPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 84 KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
K ++ D ++ +I+ K + +++ +F M G+ V +Y +L + GR+
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
A R + M+ I P T++ ++ F KL A + +++M R I D+ TY+++I
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
NG+ ++DEA+ +F M K+ P V++Y+T+IKG+ +R ++ + +F EM +
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
N VTYT L+ G A Q V ++MV + P + + L G+ CK+G L A
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL-CKNGKLAKAMV 489
Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
V + + R ++ + Y I+IE CKA + +L L K + P +Y
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV--SPN------VIAY 541
Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
N MI C G +A+ +++ + G L + +N LIR ++G+ +++ E++K M
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Query: 443 RGVPRDADAYICLIESYLRKG 463
G DA I L+ + L G
Sbjct: 602 CGFAGDAST-IGLVTNMLHDG 621
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 221/450 (49%), Gaps = 11/450 (2%)
Query: 52 FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
+ D T +I L K + A ++ M ++G Q D + ++ K+G + ++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
+ M++ +E V Y+ + + + A F +M ++GI P TY+ ++
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
+ A R DM R I+ +VVT++ +I+ + + K+ EAEKL+ EM +++I+P +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
+Y+++I G+ +R D+A +F+ M S D PN VTY+ L+ G C A ++ E ++ RE
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
M +R + + + L+ ++ + A V K M+ + + Y IL++ CK
Sbjct: 424 MSQRGL-VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
+A+ + + L +ST++ + +YN MI+ +C G+ F L KGV
Sbjct: 483 KLAKAMVVFEYL--------QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 412 L-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
+ +A+N +I G ++G+ + A ++K M G ++ Y LI + LR G+ +
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAE 594
Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
+ M G + +S ++ ++ DGR+
Sbjct: 595 LIKEMRSCGFAGDASTI-GLVTNMLHDGRL 623
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/531 (23%), Positives = 239/531 (45%), Gaps = 20/531 (3%)
Query: 123 ERSVKSYDALFKLILRRGRYMMAK-----RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
ERS S ++ ILR + K F M+ P+ +N +L K
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
E I E M++ GIS D+ TY+ IN + R ++ A + A+M + EP +++ +++
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
+ GY +R DA+ + D+M KP+ T+T L+ GL K E ++ +MV+R
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
P D + ++ CK G ++ A +LK M + I + Y +I+ CK + D A+
Sbjct: 220 QP-DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--V 415
L ++ K I RP + +Y+ +I LC+ G+ A ++++ + +P V
Sbjct: 279 NLFTEMDNKGI--RP------DVFTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPNVV 329
Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
F+ LI KEG A ++ M +R + D Y LI + +AK + M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
I P + ++++ + RV+ + + M ++G+ N ++
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 536 EEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKV 592
+ A M+ G PN ++ LL L + GK A+ + ++ D+ +Y +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 593 LDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
++ + AGK + + + + KG + + + +I+G ++G+ ++AD L
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/557 (22%), Positives = 241/557 (43%), Gaps = 16/557 (2%)
Query: 94 FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
F L+ + K + + + + M+ LG+ + +Y RR + +A KM+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
G EP T + +L G+ S ++ A+ + M G D T+ T+I+G K
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
EA L +M ++ +P +++Y T++ G D AL + +M+ ++ + V Y ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
GLC M + + EM + I P D + L+ C G + A+ +L MI I
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRP-DVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
+ LI+ F K A KL D+++++ I D + +Y+ +I C +
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--------DPDIFTYSSLINGFCMH 376
Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
+ +A+ F ++ K + V ++ LI+G K + E+ + M +RG+ + Y
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
LI + + + +A+ M+ G P + +++ L ++G++ A V + +
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
++ ++ ++E + G VE+ + G PN +++++S KG
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 570 AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIA 629
A LL + + +Y ++ A L G A + L K M G S+ L+
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR-EASAELIKEMRSCGFAGDASTIGLVT 615
Query: 630 GLNQEGNTKQA--DILS 644
+ +G ++ D+LS
Sbjct: 616 NMLHDGRLDKSFLDMLS 632
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 217/443 (48%), Gaps = 13/443 (2%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+ LV + K S+ + R VE F + T+ ++ ++ + G+ A +L M
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETG--FQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
++ ++ D + ++I+ K G + + +F+ M+ G + + +Y+ L GR+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
+ M+ I P T++V++ F KL A + ++M RGI+ + +TYN++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
I+G+ + +++EA ++ M K +P ++++ +I GY R DD L +F EM V
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
N VTY L+ G C +GK+ +K+ +EMV R + P D + LL C +G L A
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP-DIVSYKILLDGLCDNGELEKAL 493
Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
++ + + + + G Y I+I C A D A L L P + ++A +
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL--------PLKGVKLDARA 545
Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
YN MI LC KA+I FR++ ++G D + +N LIR H + + +A E+++ M
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 442 RRGVPRDADAYICLIESYLRKGE 464
G P D + + ++ + L GE
Sbjct: 606 SSGFPADV-STVKMVINMLSSGE 627
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/549 (24%), Positives = 238/549 (43%), Gaps = 42/549 (7%)
Query: 15 RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
R L D N +++ + K E L + +E G+ H T MI R KL++
Sbjct: 83 RPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI-AHSIYTLSIMINCFCRCRKLSY 141
Query: 75 ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
A + + K G + D +F L+ + V E++++ D M ++G + ++ + + L
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
+ G+ A ++M+ G +P TY +L S + A+ M+ R I L
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
D V Y+ +I+G + +D A LF EM+ K + +I+Y T+I G+ R DD ++
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
+M + PN VT++ L+ GK+ E ++L+EM++R I P + + L+ CK
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP-NTITYNSLIDGFCK 380
Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII----- 369
L A ++ MI + + ILI +CKA D ++L ++ + +I
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 370 ----------------------------LRPQSTLDMEASSYNPMIQHLCHNGQTGKA-E 400
+RP + SY ++ LC NG+ KA E
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP------DIVSYKILLDGLCDNGELEKALE 494
Query: 401 IFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
IF + K LD + +I G D A+++ + +GV DA AY +I
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
RK + A M E+GH+P + ++ + D TA+ +++ M G ++
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVS 614
Query: 521 LVAKILEAL 529
V ++ L
Sbjct: 615 TVKMVINML 623
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 246/551 (44%), Gaps = 49/551 (8%)
Query: 100 SYGKKGI-VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
S G GI ++V +F M Q +V ++ LF I + +Y + +M S+GI
Sbjct: 61 SSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIA 120
Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
+ +T ++M+ F KL A + G D V +NT++NG ++ EA +L
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
M E +PT+I+ T++ G + DA+ + D M +PN VTY +L +C
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
+G+ ++LR+M ER I D + ++ CK G L+ A ++ M +
Sbjct: 241 SGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
Y LI FC A +D KLL +++++I P +++ +I G+ +
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKI--SPN------VVTFSVLIDSFVKEGKLRE 351
Query: 399 AEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
A+ +++M++G+ + + +N+LI G KE + A ++V +M +G D + LI
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
Y + D M G + + ++++ + G+++ A ++ + MV + V+
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 518 NLDLVAKILEALLMRGHVEEAL---GRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLL 574
++ +L+ L G +E+AL G+I EK K
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKI--------------------EKSKM------- 504
Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
+D+ Y ++ + A K +A+ + + KG D ++ + +I+ L ++
Sbjct: 505 --------ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556
Query: 635 GNTKQADILSR 645
+ +ADIL R
Sbjct: 557 DSLSKADILFR 567
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 209/455 (45%), Gaps = 15/455 (3%)
Query: 163 TYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAE 221
+Y L + +K + A+ F DM +SR + V+ +N + + + K+ + L +
Sbjct: 55 SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLP-TVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 222 MKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGK 281
M+ K I ++ + + MI + + A ++ +P+ V + LL GLC +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 282 MVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYG 341
+ E +++ MVE P ++ + G+ C +G ++ A ++ M+ YG
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGL-CLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 342 ILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEI 401
++ CK+ A++LL K+ E+ I ++A Y+ +I LC +G A
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNI--------KLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 402 FFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYL 460
F ++ KG D + +N LI G G D ++++ M +R + + + LI+S++
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 461 RKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLD 520
++G+ +A L M++ G +P + + S+++ ++ R++ A +++ M+ KG ++
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 521 LVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFC 577
++ +++ L M G + N +++L+ + GK A KL
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
+ R D+ SY+ +LD L G+ A I KI
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 199/457 (43%), Gaps = 37/457 (8%)
Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
E+ F+ ++N+ SY + + +ADDA+ +F +M P + + L
Sbjct: 42 CERGFSTFSDRNL-----SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFS 96
Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
+ + V + ++M + I ++ + ++ C+ L+ A + +++L
Sbjct: 97 AIAKTKQYELVLALCKQMESKGIAHSIYTLSI-MINCFCRCRKLSYAFSTMGKIMKLGYE 155
Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVE---KEIILRPQS-----TLDMEAS----- 381
+ + L+ C A++L+D++VE K ++ + L+ + S
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 382 --------------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSK 426
+Y P++ +C +GQT A R++ ++ + LD V ++ +I G K
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
+G+ D+AF + M +G D Y LI + G D L MI+ SP
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
F +++S ++G+++ A +++K M+++G+ N +++ +EEA+ +DLM+
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
G P+ F+ L++ + + ++L R I + +Y ++ +GK
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
A + +++ + D S L+ GL G ++A
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 224/486 (46%), Gaps = 43/486 (8%)
Query: 62 MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
+I + ++G++ A +LL M KG D + ++ Y + G + + K+ ++MK+ G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
++ + Y ++ L+ R + A+ F++M+ +GI P Y ++ GF + A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
+FF +M SR I+ DV+TY +I+G+ + M EA KLF EM K +EP +++T +I GY
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK- 300
DA R+ + M PN VTYT L+ GLC G + ++L EM + + P
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 301 ---------------------------------DNSVFMKLLGVQCKSGHLNAAADVLKA 327
D + L+ CKSG ++ A ++LK
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
M+ + + +L+ FC M + KLL+ ++ K I P +T ++N ++
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI--APNAT------TFNSLV 603
Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
+ C A ++ + +GV D + NL++GH K N A+ + + M +G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
Y LI+ +L++ + +A+ D M +G + +F ++ ++ R T
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDP 723
Query: 507 MKSMVE 512
+ ++E
Sbjct: 724 IDEIIE 729
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 234/519 (45%), Gaps = 14/519 (2%)
Query: 62 MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGI-VQESVKIFDIMKQL 120
++L G L AR + M G+ D V + K ++ +F ++
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV 240
Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
GV +V SY+ + + + GR A M +G P +Y+ ++ G+ +L+
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
+ E MK +G+ + Y ++I R K+ EAE+ F+EM + I P + YTT+I G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
+ A + F EM S D+ P+ +TYTA++ G C G MVE K+ EM + + P
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP- 419
Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
D+ F +L+ CK+GH+ A V MI+ Y LI+ CK D A +LL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNN 419
++ +I L+P +YN ++ LC +G +A + G+ D V +
Sbjct: 480 HEMW--KIGLQPN------IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
L+ + K G D A EI+K M +G+ + L+ + G D + L+ M+ G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
+P ++ F S+++ ++ A+ + K M +GV + +++ +++EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 540 GRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLD 575
M G SV + L+ ++ K + A ++ D
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 218/474 (45%), Gaps = 12/474 (2%)
Query: 78 ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
+ + P+ GV W+ + ++I + G ++E+ + +M+ G V SY +
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
R G + M +G++P + Y ++ KL A F +M +GI D V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
Y T+I+G+ + + A K F EM ++I P V++YT +I G+ + +A ++F EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
++P++VT+T L+ G C AG M + +V M++ P + + L+ CK G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGD 471
Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
L++A ++L M ++ + Y ++ CK+ + A+KL+ + + L+
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF--------EAAGLN 523
Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFE 435
+ +Y ++ C +G+ KA+ ++++ KG L P V FN L+ G G + +
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
++ M +G+ +A + L++ Y + A M G P + ++++
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG 549
+ ++ A + + M KG ++ + +++ L R EA D M + G
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 240/549 (43%), Gaps = 23/549 (4%)
Query: 95 EVLIESYGKK---GIVQESVKIFDIM----KQLGVERSVKSYDALFKLILRRGRYMMAKR 147
+ LI S+ ++ + V+ FD++ K G + V +D F++++ G A+R
Sbjct: 139 QSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRV--FDVFFQVLVDFGLLREARR 196
Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFL-SLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
F KML+ G+ + + NV L K TAI F + G+ +V +YN +I+
Sbjct: 197 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFV 256
Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
+ ++ EA L M+ K P VISY+T++ GY D ++ + MK +KPN+
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
Y +++ LC K+ E ++ EM+ + I P D V+ L+ CK G + AA+
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
M I + Y +I FC+ A KL ++ K L P S ++ +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG--LEPDSV------TFTEL 427
Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
I C G A +++ G + V + LI G KEG+ DSA E++ M + G+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
+ Y ++ + G +A + G + + + ++M++ + G + A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
++K M+ KG++ + ++ + G +E+ ++ M+ G PN F+SL+
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
+ AA + R D +YE ++ A A+ + ++ KG
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 623 SSDKLIAGL 631
+ LI G
Sbjct: 668 TYSVLIKGF 676
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 154/309 (49%), Gaps = 1/309 (0%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D T+ +I ++G + A + +M KG++ D F LI Y K G ++++ ++
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
+ M Q G +V +Y L + + G A ++M G++P TYN ++ G S
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
+E A++ + ++ G++ D VTY T+++ Y + +MD+A+++ EM K ++PT++++
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
++ G+ +D ++ + M + + PNA T+ +L+ C + + ++M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
R + P D + L+ CK+ ++ A + + M Y +LI+ F K + +
Sbjct: 625 RGVGP-DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 355 RAIKLLDKL 363
A ++ D++
Sbjct: 684 EAREVFDQM 692
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 7/222 (3%)
Query: 6 WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
W LQ I F +N + N L + N E A++ E AGL N D T+ +++
Sbjct: 483 WKIGLQPNI------FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL-NADTVTYTTLMDA 535
Query: 66 LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
+ G+++ A+ IL +M KG+Q F VL+ + G++++ K+ + M G+ +
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
++++L K R A + M S G+ P TY ++ G + ++ A F+
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
+MK +G S+ V TY+ +I G+ + KK EA ++F +M+ + +
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 208/415 (50%), Gaps = 12/415 (2%)
Query: 36 SEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFE 95
SE + R VE F D T+ ++ L + G A + M ++ ++ +
Sbjct: 192 SEALVLIDRMVEYG--FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
Query: 96 VLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
++I+S K G +++ +F+ M+ G++ V +Y +L + G++ + +M+
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 156 GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEA 215
I P T++ ++ F KL A + +M +RGI+ D +TYN++I+G+ + + EA
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
++F M K EP +++Y+ +I Y +R DD +R+F E+ S + PN +TY L+ G
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
C +GK+ +++ +EMV R +PP + + L G+ C +G LN A ++ + M + +
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL-CDNGELNKALEIFEKMQKSRMTL 488
Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
G Y I+I C A D A L L +K + +P + +YN MI LC G
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV--KP------DVVTYNVMIGGLCKKGS 540
Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
+A++ FR++ + G D +N LIR H S+ E+++ M G D+
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 233/522 (44%), Gaps = 16/522 (3%)
Query: 15 RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
R L D N + + + K + L F + +E G+ HD T MI R KL
Sbjct: 65 RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI-EHDMYTMTIMINCYCRKKKLLF 123
Query: 75 ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
A +L K G + D F L+ + +G V E+V + D M ++ + + L
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
+ +GR A ++M+ G +P TY +L S A+ F M+ R I
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
VV Y+ +I+ + D+A LF EM+ K I+ V++Y+++I G + DD ++
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
EM ++ P+ VT++AL+ GK++E +++ EM+ R I P D + L+ CK
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP-DTITYNSLIDGFCK 362
Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
L+ A + M+ + Y ILI ++CKA+ D ++L ++ K +I P +
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI--PNT 420
Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDSA 433
+YN ++ C +G+ A+ F++++ +GV V + L+ G G + A
Sbjct: 421 I------TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
EI + M + + Y +I + DA + S+ + G P + ++
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
L + G + A + + M E G + D I L+R H+
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPD-DFTYNI----LIRAHL 571
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 228/504 (45%), Gaps = 13/504 (2%)
Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
F M+ PT +N + + + + + F + M+ GI D+ T MIN Y R
Sbjct: 58 FESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCR 117
Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
KK+ A + + EP I+++T++ G+ R +A+ + D M +P+ VT
Sbjct: 118 KKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVT 177
Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
+ L+ GLC G++ E ++ MVE P D + +L CKSG+ A D+ + M
Sbjct: 178 VSTLINGLCLKGRVSEALVLIDRMVEYGFQP-DEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
+I Y I+I++ CK +D A+ L +++ K I + +Y+ +I
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI--------KADVVTYSSLIG 288
Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
LC++G+ R+++ + ++ D V F+ LI KEG A E+ M RG+
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
D Y LI+ + ++ +A D M+ G P + ++ S + RV R+
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEK 564
+ + KG+ N ++ G + A M+ G SV + LL L +
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 565 GKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSS 624
G+ A+++ + + + Y ++ + A K +A+S+ + +KG D +
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 625 DKLIAGLNQEGNTKQADILSRMIR 648
+ +I GL ++G+ +AD+L R ++
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMK 552
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/429 (18%), Positives = 179/429 (41%), Gaps = 13/429 (3%)
Query: 216 EKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPG 275
EK + + +I +SY ++ + + +DA+ +F+ M P + + L
Sbjct: 20 EKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSA 79
Query: 276 LCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPT 335
+ + V + M I D ++ C+ L A VL +L
Sbjct: 80 VARTKQYDLVLGFCKGMELNGI-EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEP 138
Query: 336 EAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQ 395
+ + L+ FC A+ L+D++VE + RP + + + +I LC G+
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMK--QRP------DLVTVSTLINGLCLKGR 190
Query: 396 TGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
+A + ++++ G D V + ++ K GN A ++ + M R + Y
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
+I+S + G DA + + M G + S++ L DG+ +++++ M+ +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
+ ++ + +++ + G + EA + M+ G P+ ++SL+ ++ A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 572 KLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
++ D + + C D+ +Y ++++ A + + + +I KG + + + + L+ G
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 632 NQEGNTKQA 640
Q G A
Sbjct: 431 CQSGKLNAA 439
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 35/259 (13%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D T+ +I+ + L+ A + M KG + D + +LI SY K V + +++F
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
+ G+ + +Y+ L + G+ AK F +M+S G+ P+ TY ++L G +
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 175 LKLETAIRFFEDM-KSR----------------------------------GISLDVVTY 199
+L A+ FE M KSR G+ DVVTY
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
N MI G + + EA+ LF +MKE P +Y +I+ ++ ++ + +EMK
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588
Query: 260 FDVKPNAVTYTALLPGLCD 278
++ T ++ L D
Sbjct: 589 CGFSADSSTIKMVIDMLSD 607
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 153/630 (24%), Positives = 276/630 (43%), Gaps = 33/630 (5%)
Query: 39 ALQFFRWVERAGLFNHDRETHLKMI--EILGRVGKLNHARCILLDMP------------- 83
AL+F +WV + D L I IL R + AR IL ++
Sbjct: 53 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 112
Query: 84 ---KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
+ + ++++LI Y ++G++Q+S++IF +M G SV + +A+ +++ G
Sbjct: 113 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 172
Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
+ + +ML I P T+N+++ E + + M+ G + +VTYN
Sbjct: 173 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 232
Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
T+++ Y + + A +L MK K ++ V +Y +I R + +M+
Sbjct: 233 TVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 292
Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
+ PN VTY L+ G + GK++ ++L EM+ + P ++ F L+ G+
Sbjct: 293 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP-NHVTFNALIDGHISEGNFKE 351
Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
A + M + YG+L++ CK +D A ++ ++ + +
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM--------KRNGVCVGR 403
Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVK 438
+Y MI LC NG +A + ++ K G+ DP V ++ LI G K G +A EIV
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVC 462
Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
+ R G+ + Y LI + R G +A ++MI +GH+ F ++ SL + G
Sbjct: 463 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522
Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNF---D 555
+V A M+ M G+ N ++ G +A D M + G P F
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582
Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
SLL L + G A K L +D Y +L A+ +G A S+ +++++
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642
Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
+ D + LI+GL ++G T A + ++
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAK 672
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 147/617 (23%), Positives = 280/617 (45%), Gaps = 18/617 (2%)
Query: 37 EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
+ +L+ FR + G FN T ++ + + G+ L +M K+ + D F +
Sbjct: 140 QDSLEIFRLMGLYG-FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 198
Query: 97 LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
LI +G ++S + M++ G ++ +Y+ + ++GR+ A + M S+G
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258
Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
++ TYN+++ S ++ DM+ R I + VTYNT+ING++ K+ A
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 318
Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
+L EM + P +++ +I G+++ +AL++F M++ + P+ V+Y LL GL
Sbjct: 319 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378
Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
C + ++ + ++R + ++ CK+G L+ A +L M + I +
Sbjct: 379 CKNAEF-DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP-QSTLDMEASSYNPMIQHLCHNGQ 395
Y LI FCK + A KEI+ R + L Y+ +I + C G
Sbjct: 438 IVTYSALINGFCKVGRFKTA---------KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488
Query: 396 TGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYIC 454
+A + ++ +G D FN L+ K G A E ++ M G+ + ++ C
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 455 LIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
LI Y GE A + D M + GH P + S+++ L + G ++ A + +KS+
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 515 VKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAV 571
+ + +L A+ G++ +A+ M+Q +P+ + SL+S L KGKT+ A+
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 572 KLLDFCLGRDCII-DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
R ++ + Y +D + AG+ ++ G D +++ +I G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 631 LNQEGNT-KQADILSRM 646
++ G K D+L M
Sbjct: 729 YSRMGKIEKTNDLLPEM 745
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 144/649 (22%), Positives = 277/649 (42%), Gaps = 55/649 (8%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D T+ +I L R ++ +L DM K+ + +E + LI + +G V + ++
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
+ M G+ + +++AL + G + A + F M ++G+ P+ +Y V+L G +
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 381
Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
+ + A F+ MK G+ + +TY MI+G + +DEA L EM + I+P +++Y
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441
Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
+ +I G+ V R A I + + PN + Y+ L+ C G + E ++ M+
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501
Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
+D+ F L+ CK+G + A + ++ M I + LI + +
Sbjct: 502 EG-HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 560
Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK-KGVLD 413
+A + D++ + + T +Y +++ LC G +AE F + L +D
Sbjct: 561 KAFSVFDEMTK----VGHHPTF----FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 612
Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP-------- 465
V +N L+ K GN A + M +R + D+ Y LI RKG+
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 672
Query: 466 -ADAK-----------TALDSMIEDGHSPASSLFRSVMESLFED---------------- 497
A+A+ +D M + G A FR M++L
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732
Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
G+++ + ++ M + NL +L R V + ++ +G +P+
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792
Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
SL+ + E +K+L + R +D ++ ++ A G+ A+ L K+M
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD-LVKVMT 851
Query: 615 KGGVT-DWKSSDKLIAGLNQEGNTKQADILSRMIRGEMSRGSQKEKKQK 662
G++ D + D +++ LN+ ++ SRM+ EMS+ + +K
Sbjct: 852 SLGISLDKDTCDAMVSVLNRNHRFQE----SRMVLHEMSKQGISPESRK 896
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 154/702 (21%), Positives = 282/702 (40%), Gaps = 74/702 (10%)
Query: 33 AKNSEHALQ--FFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
KN+E L F+ ++R G+ R T+ MI+ L + G L+ A +L +M K G+ D
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCV-GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 91 EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
+ LI + K G + + +I + ++G+ + Y L R G A R +
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
M+ EG T+NV++ + K+ A F M S GI + V+++ +INGY
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
+ +A +F EM + PT +Y +++KG +A + + + + V Y
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617
Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK-AMI 329
LL +C +G + + + EMV+R I P D+ + L+ C+ G A K A
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILP-DSYTYTSLISGLCRKGKTVIAILFAKEAEA 676
Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKL---LDKLVEKEIILRPQSTLDMEA------ 380
R ++ Y ++ KA + I +D L I+ + +D +
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736
Query: 381 ------------------SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL---------- 412
++YN ++ + + +R ++ G+L
Sbjct: 737 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796
Query: 413 --------------------------DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
D FN LI G + AF++VK+M G+
Sbjct: 797 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 856
Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
D D ++ R +++ L M + G SP S + ++ L G ++TA V
Sbjct: 857 LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 916
Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSE 563
+ M+ + + ++ AL G +EA + M++ VP +F +L+ + +
Sbjct: 917 KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 976
Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKS 623
G I A++L +DL SY ++ L A G A+ + ++ G + + +
Sbjct: 977 NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATT 1036
Query: 624 SDKLIAG-LNQEGNTKQADILSR--MIRGEMSRGSQKEKKQK 662
LI G L +E ADI+ + + RG ++ S + +
Sbjct: 1037 YKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSHR 1078
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 235/497 (47%), Gaps = 13/497 (2%)
Query: 82 MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
M + G+ + + +LI + ++ + ++ + M +LG E S+ + +L R
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
A ++M+ G P T+ ++ G FL K A+ + M RG ++VTY
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
++NG + +D A L +M+ IE V+ + T+I DDAL +F EM++
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
++PN VTY++L+ LC G+ + ++L +M+E+ I P + F L+ K G A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP-NLVTFNALIDAFVKEGKFVEA 274
Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
+ MI+ SI + Y LI FC + D+A ++ + +V K+ P +
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF--P------DLD 326
Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
+YN +I+ C + + FR++ +G++ D V + LI+G +G+ D+A ++ K M
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
GVP D Y L++ G+ A D M + ++ +++E + + G+V
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 501 QTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSL 557
+ S+ KGVK N+ ++ L + ++EA + M + G +P+ +++L
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 558 LSVLSEKGKTIAAVKLL 574
+ G A+ +L+
Sbjct: 507 IRAHLRDGDKAASAELI 523
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 210/441 (47%), Gaps = 13/441 (2%)
Query: 24 NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
L++ + K SE R V+R N T+ ++ L + G ++ A +L M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPN--LVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 84 KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
++ D +F +I+S K V +++ +F M+ G+ +V +Y +L + GR+
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
A + + M+ + I P T+N ++ F K A + +DM R I D+ TYN++I
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
NG+ ++D+A+++F M K+ P + +Y T+IKG+ +R +D +F EM +
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
+ VTYT L+ GL G QKV ++MV +PP D + LL C +G L A +
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTYSILLDGLCNNGKLEKALE 416
Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
V M + I + Y +IE CKA D L L K + +P +Y
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV--KPN------VVTY 468
Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
N MI LC +A +++ + G L D +N LIR H ++G+ ++ E+++ M
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Query: 443 RGVPRDADAYICLIESYLRKG 463
DA + I L+ + L G
Sbjct: 529 CRFVGDA-STIGLVANMLHDG 548
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 228/503 (45%), Gaps = 11/503 (2%)
Query: 13 KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
K R L F+ N + + + K + + ++R G+ +H+ T+ +I R ++
Sbjct: 3 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI-SHNLYTYNILINCFCRRSQI 61
Query: 73 NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
+ A +L M K G + L+ Y + ++V + D M ++G ++ L
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
+ + A ++M+ G +P TY V++ G ++ A M++ I
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
DVV +NT+I+ +++ +D+A LF EM+ K I P V++Y+++I + R DA +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
+ +M + PN VT+ AL+ GK VE +K+ +M++R I P D + L+
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP-DIFTYNSLINGF 300
Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
C L+ A + + M+ + Y LI+ FCK++ + +L ++ + ++
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV--- 357
Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
+ +Y +IQ L H+G A+ F+Q++ GV D + ++ L+ G G +
Sbjct: 358 -----GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
A E+ M + + D Y +IE + G+ D S+ G P + +++
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 492 ESLFEDGRVQTASRVMKSMVEKG 514
L +Q A ++K M E G
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDG 495
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 217/509 (42%), Gaps = 44/509 (8%)
Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
S+ ++ L I + ++ + KM GI +TYN+++ F ++ A+
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
M G +VT ++++NGY K++ +A L +M E P I++TT+I G
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
+A +A+ + D M +PN VTY ++ GLC G + +L +M I D +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA-DVVI 187
Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
F ++ CK H++ A ++ K M I Y LI C + A +LL ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIR 422
EK+I P ++N +I G+ +AE ++K+ + DP +N+LI
Sbjct: 248 EKKI--NPNLV------TFNALIDAFVKEGKFVEAEKLHDDMIKRSI-DPDIFTYNSLIN 298
Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
G D A ++ + M + D D Y LI+ + + D M G
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
+ + ++++ LF DG A +V K MV GV ++ + +L+ L G +E+AL
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 543 DLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKT 602
D M +S +KL D+ Y +++ + AGK
Sbjct: 419 DYMQKS---------------------EIKL-----------DIYIYTTMIEGMCKAGKV 446
Query: 603 LNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
+ + + + KG + + + +I+GL
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 6/241 (2%)
Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
FN L+ +K D + + M R G+ + Y LI + R+ + + A L M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVE 536
+ G+ P+ S++ R+ A ++ MVE G + + ++ L +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
EA+ +D M+Q G PN + +++ L ++G A LL+ D+ + ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 594 DALLAAGKTLNAYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRGEM 651
D+L +A + LFK ME G+ + + LI+ L G A +LS MI ++
Sbjct: 193 DSLCKYRHVDDALN-LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 652 S 652
+
Sbjct: 252 N 252
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/600 (25%), Positives = 265/600 (44%), Gaps = 33/600 (5%)
Query: 39 ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL- 97
A +FF+W F H E++ + IL A +L +M + D D+F+VL
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLS--KADCDVFDVLW 182
Query: 98 ------IESYG----------KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
+ +G G+++E+++ F MK+ V +S + L + G+
Sbjct: 183 STRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGK 242
Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
KR+F M+ G PT TYN+M+ +E A FE+MK RG+ D VTYN+
Sbjct: 243 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNS 302
Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
MI+G+ + ++D+ F EMK+ EP VI+Y +I + + L + EMK
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
+KPN V+Y+ L+ C G M + K +M + P + + + L+ CK G+L+ A
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT-YTSLIDANCKIGNLSDA 421
Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
+ M+++ + Y LI+ C AE A +L K+ +I P +
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI--PN------LA 473
Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
SYN +I +A +L +G+ D + + I G ++A ++ M
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
G+ ++ Y L+++Y + G P + LD M E F +++ L ++ V
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 501 QTASRVMKSMVEK-GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDS 556
A + G++ N + +++ L VE A + M+Q G VP+ + S
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653
Query: 557 LLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKG 616
L+ ++G + A+ L D +DL +Y ++ L + A S L +++ +G
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 224/483 (46%), Gaps = 46/483 (9%)
Query: 58 THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
T+ MI+ + + G + AR + +M +G+ D + +I+ +GK G + ++V F+ M
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
K + E V +Y+AL + G+ + ++ +M G++P +Y+ ++ F +
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 178 ETAIRFFEDMK-----------------------------------SRGISLDVVTYNTM 202
+ AI+F+ DM+ G+ +VVTY +
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
I+G ++M EAE+LF +M + P + SY +I G+V + D AL + +E+K +
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS-VFMKLLGVQCKSGHLNAA 321
KP+ + Y + GLC K+ + V+ EM E I K NS ++ L+ KSG+
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI--KANSLIYTTLMDAYFKSGNPTEG 561
Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
+L M L I + +LI+ CK ++ +A+ +++ L A+
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN-------DFGLQANAA 614
Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
+ MI LC + Q A F Q+++KG++ D A+ +L+ G+ K+GN A + M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRV 500
G+ D AY L+ + A++ L+ MI +G P L SV++ +E G +
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 734
Query: 501 QTA 503
A
Sbjct: 735 DEA 737
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 135/281 (48%), Gaps = 6/281 (2%)
Query: 27 YNVL-HG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
YN L HG AKN + AL+ ++ G+ D + I L + K+ A+ ++ +M
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGI-KPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
+ G++ + ++ L+++Y K G E + + D MK+L +E +V ++ L + +
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 143 MMAKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
A YFN++ ++ G++ + M+ G ++E A FE M +G+ D Y +
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653
Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
+++G + + EA L +M E ++ +++YT+++ G + A +EM
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
+ P+ V ++L + G + E ++ +++ + DN
Sbjct: 714 IHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDN 754
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/592 (24%), Positives = 261/592 (44%), Gaps = 15/592 (2%)
Query: 30 LHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQW 89
L + AL+ F + F+ + + +++ LGR G + + IL DM +
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 90 DEDMFEVLIESYGKKGIVQESVKIFDIM-KQLGVERSVKSYDALFKLILRRGRYMMAKRY 148
F +LIESY + + E + + D M + G++ Y+ + L++ + +
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
KM GI+P T+NV++ + +L AI EDM S G+ D T+ T++ GY
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD-VKPNAV 267
+D A ++ +M E + +S ++ G+ R +DAL EM + D P+
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 268 TYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKA 327
T+ L+ GLC AG + +++ M++ P D + ++ CK G + A +VL
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP-DVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
MI Y LI CK + A +L L K I+ + ++N +I
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL--------PDVCTFNSLI 407
Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVP 446
Q LC A F ++ KG D +N LI +G D A ++K M G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 447 RDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRV 506
R Y LI+ + + + +A+ D M G S S + ++++ L + RV+ A+++
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 507 MKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSE 563
M M+ +G K + +L G +++A + M +G P+ + +L+S L +
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 564 KGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
G+ A KLL + + +Y V+ L KT A ++ +++E+
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 224/473 (47%), Gaps = 31/473 (6%)
Query: 3 ERAWTTRLQN-----------KIRALVPQFD---HNLVYNVL-HG---AKNSEHALQFFR 44
E+ +TT +Q +IR + +F N+ NV+ HG E AL F +
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 45 WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKK 104
+ F D+ T ++ L + G + HA I+ M ++G D + +I K
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 105 GIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTY 164
G V+E+V++ D M + +Y+ L + + + A + S+GI P T+
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 165 NVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKE 224
N ++ G L+ A+ FE+M+S+G D TYN +I+ K+DEA + +M+
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 225 KNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVE 284
+VI+Y T+I G+ + +A IFDEM+ V N+VTY L+ GLC + ++ +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 285 VQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
+++ +M+ P D + LL C+ G + AAD+++AM + YG LI
Sbjct: 524 AAQLMDQMIMEGQKP-DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
CKA + A KLL + K I L P +YNP+IQ L +T +A FR
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPH--------AYNPVIQGLFRKRKTTEAINLFR 634
Query: 405 QLMKKGVLDP--VAFNNLIRGHSKEGNP--DSAFEIVKIMGRRGVPRDADAYI 453
+++++ P V++ + RG G P ++ +V+++ + VP + Y+
Sbjct: 635 EMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYM 687
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/575 (22%), Positives = 252/575 (43%), Gaps = 55/575 (9%)
Query: 60 LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQ 119
LK++EI +HA+ M G++ D F VLI++ + ++ ++ + + M
Sbjct: 170 LKLVEI-------SHAK-----MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 120 LGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
G+ K++ + + + G A R +M+ G + + NV++ GF ++E
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277
Query: 180 AIRFFEDMKSR-GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
A+ F ++M ++ G D T+NT++NG + + A ++ M ++ +P V +Y ++I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
G + +A+ + D+M + D PN VTY L+ LC ++ E ++ R + + I
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
P D F L+ C + + A ++ + M + Y +LI++ C D A+
Sbjct: 398 P-DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
+L ++ E+ +S + +YN +I C +T +AE F ++ GV + V +
Sbjct: 457 MLKQM---ELSGCARSVI-----TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
N LI G K + A +++ M G D Y L+ + R G+ A + +M
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
+G P + +++ L + GRV+ AS++++S+ KG+ +++ L + E
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 538 ALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
A+ M++ P D SY V L
Sbjct: 629 AINLFREMLEQNEAPP-------------------------------DAVSYRIVFRGLC 657
Query: 598 AAGKTL-NAYSILFKIMEKGGVTDWKSSDKLIAGL 631
G + A L +++EKG V ++ S L GL
Sbjct: 658 NGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 151/332 (45%), Gaps = 12/332 (3%)
Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
+SG + +L+ M + ILIE++ + E+ D + ++D +++ E L+P
Sbjct: 95 RSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMID-EFGLKPD 153
Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDS 432
+ YN M+ L EI ++ G+ D FN LI+ +
Sbjct: 154 THF------YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
A +++ M G+ D + +++ Y+ +G+ A + M+E G S ++ ++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 493 SLFEDGRVQTASRVMKSMVEK-GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
++GRV+ A ++ M + G + ++ L GHV+ A+ +D+M+Q G
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
P+ ++S++S L + G+ AV++LD + RDC + +Y ++ L + A +
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
+ KG + D + + LI GL N + A
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 212/430 (49%), Gaps = 12/430 (2%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+ L+ + K SE + R VE D T+ ++ + R G + A +L M
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGC--QPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
++ V+ D + +I+S + G + ++ +F M+ G++ SV +Y++L + + + G++
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
M+S I P T+NV+L F KL+ A +++M +RGIS +++TYNT+
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
++GY ++ EA + M P ++++T++IKGY V+R DD +++F + +
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
NAVTY+ L+ G C +GK+ +++ +EMV + P D + LL C +G L A
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGILLDGLCDNGKLEKAL 458
Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
++ + + + + Y +IE CK + A L L P + +
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL--------PCKGVKPNVMT 510
Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
Y MI LC G +A I R++ + G + +N LIR H ++G+ ++ ++++ M
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Query: 442 RRGVPRDADA 451
G DA +
Sbjct: 571 SCGFSADASS 580
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 236/517 (45%), Gaps = 11/517 (2%)
Query: 15 RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
R L D + ++ + K L F + +E G+ H+ T MI R K
Sbjct: 83 RPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI-AHNIYTLNIMINCFCRCCKTCF 141
Query: 75 ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
A +L + K G + D F LI+ +G V E+V + D M + G + V +Y+++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
I R G +A KM ++ TY+ ++ ++ AI F++M+++GI
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
VVTYN+++ G + K ++ L +M + I P VI++ ++ +V + +A ++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
EM + + PN +TY L+ G C ++ E +L MV P D F L+ C
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP-DIVTFTSLIKGYCM 380
Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
++ V + + + + A Y IL++ FC++ A +L ++V ++ P
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL--P-- 436
Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
+ +Y ++ LC NG+ KA F L K + L V + +I G K G + A
Sbjct: 437 ----DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
+ + + +GV + Y +I +KG ++A L M EDG++P + +++ +
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
DG + ++++++ M G + + +++ LL
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 219/514 (42%), Gaps = 48/514 (9%)
Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
S+ + F I R ++ + + ++ GI +T N+M+ F K A
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 185 EDMKSRGISLDVVTYNTMI-----------------------------------NGYNRF 209
+ G D T+NT+I NG R
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
A L +M+E+N++ V +Y+T+I D A+ +F EM++ +K + VTY
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
+L+ GLC AGK + +L++MV R I P + F LL V K G L A ++ K MI
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQH 389
I Y L++ +C A +LD +V R + + D+ ++ +I+
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV------RNKCSPDI--VTFTSLIKG 377
Query: 390 LCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRD 448
C + FR + K+G V + V ++ L++G + G A E+ + M GV D
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 449 ADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMK 508
Y L++ G+ A + + + ++ +++E + + G+V+ A +
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 509 SMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
S+ KGVK N+ ++ L +G + EA + M + G+ PN +++L+ G
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
A+ KL++ D +S + V+D LL+
Sbjct: 558 DLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/529 (20%), Positives = 228/529 (43%), Gaps = 52/529 (9%)
Query: 125 SVKSYDALFKLILRRGRYMMAK----RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
S+ + + F+ LR G + K F +M+ P+ ++ + +
Sbjct: 48 SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 107
Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
+ F + ++ GI+ ++ T N MIN + R K A + ++ + EP ++ T+IKG
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167
Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
+ +A+ + D M +P+ VTY +++ G+
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI------------------------ 203
Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
C+SG + A D+L+ M ++ + Y +I++ C+ D AI L
Sbjct: 204 ------------CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
++ K I +YN +++ LC G+ + + ++ + ++ + + FN
Sbjct: 252 KEMETKGI--------KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
L+ KEG A E+ K M RG+ + Y L++ Y + ++A LD M+ +
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
SP F S+++ RV +V +++ ++G+ N + +++ G ++ A
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
M+ G +P+ + LL L + GK A+++ + + + Y +++ +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 597 LAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
GK +A+++ + KG + + +I+GL ++G+ +A+IL R
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 143/613 (23%), Positives = 260/613 (42%), Gaps = 63/613 (10%)
Query: 26 VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
+Y +L N +++ F W + H + + +I LG G+ +L+ M +
Sbjct: 81 LYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDE 140
Query: 86 GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMM 144
G+ + E +F ++ Y K G ++ ++ M+ + E + KSY+ + ++++ + +
Sbjct: 141 GIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKV 200
Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
A F MLS I PT T+ V++ F ++++A+ DM G + V Y T+I+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
++ +++EA +L EM P ++ +I G +R ++A ++ + M P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 265 NAVTYTALLPGLC-----DA--------------------------GKMVEVQKVLREMV 293
+ +TY L+ GLC DA G++ + + VL +MV
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
Y D + L+ K G + A +VL M Y IL++ FCK
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 354 DRAIKLLD-------------------------KLVEKEIILR--PQSTLDMEASSYNPM 386
D A +L+ ++ E I R P+ + ++N +
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
I LC + A R ++ +GV+ + V +N LI + G A ++V M +G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
P D Y LI+ R GE A++ + M+ DGH+P++ ++ L G V+ A
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
K MV +G ++ ++ L G +E+ L + G P+ F++L+S L
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 563 EKGKTIAAVKLLD 575
+ G A LLD
Sbjct: 681 KGGFVYDACLLLD 693
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/559 (24%), Positives = 254/559 (45%), Gaps = 32/559 (5%)
Query: 7 TTRLQNKIRALV---PQF-DHNLVYNVL-HGAKNSEHALQFFRWVER---AGLFNHDRET 58
TTRL ++R + P F +N+V +L G + A F+ + R LF T
Sbjct: 165 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLF-----T 219
Query: 59 HLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK 118
+++ V +++ A +L DM K G + +++ LI S K V E++++ + M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
+G ++++ + + + R A + N+ML G P TY ++ G +++
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTM 237
A +D+ R ++V +NT+I+G+ ++D+A+ + ++M I P V +Y ++
Sbjct: 340 AA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
I GY AL + +M++ KPN +YT L+ G C GK+ E VL EM +
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 298 PPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA 356
P N+V F L+ CK + A ++ + M R + + LI C+ + A
Sbjct: 456 KP--NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 357 IKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPV 415
+ LL ++ + ++ +YN +I G+ +A +++ +G LD +
Sbjct: 514 LWLLRDMISEGVV--------ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRG-VPRDADAYICLIESYLRKGEPADAKTALDS 474
+N+LI+G + G D A + + M R G P + I LI R G +A
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI-LINGLCRSGMVEEAVEFQKE 624
Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
M+ G +P F S++ L GR++ + + + +G+ + ++ L G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 535 VEEALGRIDLMMQSGSVPN 553
V +A +D ++ G VPN
Sbjct: 685 VYDACLLLDEGIEDGFVPN 703
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 204/442 (46%), Gaps = 15/442 (3%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D ET +I L + ++N A ++ M +G D+ + L+ K G V + +F
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML-SEGIEPTRHTYNVMLWGFFL 173
+ + + ++ L + GR AK + M+ S GI P TYN +++G++
Sbjct: 346 YRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
+ A+ DM+++G +V +Y +++G+ + K+DEA + EM ++P +
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
+ +I + R +A+ IF EM KP+ T+ +L+ GLC+ ++ +LR+M+
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
+ + + L+ + G + A ++ M+ P + Y LI+ C+A
Sbjct: 522 SEGVV-ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VL 412
D+A L +K++ S + S N +I LC +G +A F ++++ +G
Sbjct: 581 DKARSLFEKMLRDG---HAPSNI-----SCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
D V FN+LI G + G + + + + G+P D + L+ + G DA L
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 473 DSMIEDGHSPASSLFRSVMESL 494
D IEDG P + +++S+
Sbjct: 693 DEGIEDGFVPNHRTWSILLQSI 714
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 13/312 (4%)
Query: 78 ILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
+L DM KG + + + +L++ + K G + E+ + + M G++ + ++ L
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
+ R A F +M +G +P +T+N ++ G +++ A+ DM S G+ + V
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
TYNT+IN + R ++ EA KL EM + I+Y ++IKG D A +F++M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
P+ ++ L+ GLC +G + E + +EMV R P D F L+ C++G
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP-DIVTFNSLINGLCRAGR 649
Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK---------EI 368
+ + + + IP + + L+ CK A LLD+ +E I
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 369 ILR---PQSTLD 377
+L+ PQ TLD
Sbjct: 710 LLQSIIPQETLD 721
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 144/298 (48%), Gaps = 1/298 (0%)
Query: 58 THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
++ +++ ++GK++ A +L +M G++ + F LI ++ K+ + E+V+IF M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
+ G + V ++++L + A M+SEG+ TYN ++ F ++
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
+ A + +M +G LD +TYN++I G R ++D+A LF +M P+ IS +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
I G ++A+ EM P+ VT+ +L+ GLC AG++ + + R++ I
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDR 355
PP D F L+ CK G + A +L I + IL+++ E DR
Sbjct: 666 PP-DTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 128/251 (50%), Gaps = 5/251 (1%)
Query: 27 YNVLHGAKNSEH----ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+N L A EH A++ FR + R G D T +I L V ++ HA +L DM
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
+GV + + LI ++ ++G ++E+ K+ + M G +Y++L K + R G
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
A+ F KML +G P+ + N+++ G S +E A+ F ++M RG + D+VT+N++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
ING R ++++ +F +++ + I P +++ T++ DA + DE
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 263 KPNAVTYTALL 273
PN T++ LL
Sbjct: 701 VPNHRTWSILL 711
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/587 (23%), Positives = 276/587 (47%), Gaps = 33/587 (5%)
Query: 93 MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM-MAKRYFNK 151
+F+++++SY + ++ +++ I + + G V SY+A+ +R R + A+ F +
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
ML + P TYN+++ GF + ++ A+ F+ M+++G +VVTYNT+I+GY + +K
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
+D+ KL M K +EP +ISY +I G R + + EM + VTY
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM-IR 330
L+ G C G + + EM+ + P + + L+ CK+G++N A + L M +R
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT-YTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
P E Y L++ F + + A ++L ++ + + +YN +I
Sbjct: 375 GLCPNERT-YTTLVDGFSQKGYMNEAYRVLREMND--------NGFSPSVVTYNALINGH 425
Query: 391 CHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
C G+ A + +KG+ D V+++ ++ G + + D A + + M +G+ D
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
Y LI+ + + +A + M+ G P + +++ + +G ++ A ++
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---------------F 554
MVEKGV ++ + ++ L + EA + + SVP+ F
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 555 DSLLSVL---SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
S++S++ KG A ++ + LG++ D +Y ++ AG AY++ +
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 612 IMEKGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMIRG-EMSRGSQ 656
+++ G + + L+ L++EG + + ++ ++R E+S Q
Sbjct: 666 MVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQ 712
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 217/465 (46%), Gaps = 9/465 (1%)
Query: 62 MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
+I L R G++ +L +M ++G DE + LI+ Y K+G +++ + M + G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
+ SV +Y +L + + G A + ++M G+ P TY ++ GF + A
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
R +M G S VVTYN +ING+ KM++A + +MKEK + P V+SY+T++ G+
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
D+ALR+ EM +KP+ +TY++L+ G C+ + E + EM+ +PP D
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP-D 519
Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
+ L+ C G L A + M+ + + Y +LI K A +LL
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 362 KLVEKEIILRP-------QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLD 413
KL +E + ++ ++E S +I+ C G +A+ F ++ K D
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
A+N +I GH + G+ A+ + K M + G I L+++ ++G+ + + +
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
++ + + ++E +G + V+ M + G N
Sbjct: 700 HVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/582 (23%), Positives = 269/582 (46%), Gaps = 49/582 (8%)
Query: 2 AERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLK 61
AE + L++++ V F +N++ A N + AL F +E G + T+
Sbjct: 189 AENVFKEMLESQVSPNV--FTYNILIRGFCFAGNIDVALTLFDKMETKGCLP-NVVTYNT 245
Query: 62 MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
+I+ ++ K++ +L M KG++ + + V+I ++G ++E + M + G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
+Y+ L K + G + A +ML G+ P+ TY ++ + + A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
F + M+ RG+ + TY T+++G+++ M+EA ++ EM + P+V++Y +I G+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
+ +DA+ + ++MK + P+ V+Y+ +L G C + + E +V REMVE+ I P D
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP-D 484
Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
+ L+ C+ A D+ + M+R+ +P + Y LI +C ++A++L +
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAE-IFFRQLMKKGVLDPVAFNNL 420
++VEK ++ P + +Y+ +I L +T +A+ + + ++ V V ++ L
Sbjct: 545 EMVEKGVL--P------DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
I E + F+ V + LI+ + KG +A +SM+ H
Sbjct: 597 I-----ENCSNIEFKSV---------------VSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
P + + ++ G ++ A + K MV+ G + V +++AL G V E
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Query: 541 RIDLMMQSGSVP----------------NFDSLLSVLSEKGK 566
I +++S + N D +L VL+E K
Sbjct: 697 VIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 212/440 (48%), Gaps = 11/440 (2%)
Query: 52 FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
++ D T+ +I+ + G + A + +M + G+ + LI S K G + ++
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
+ D M+ G+ + ++Y L ++G A R +M G P+ TYN ++ G
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
++ K+E AI EDMK +G+S DVV+Y+T+++G+ R +DEA ++ EM EK I+P
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
I+Y+++I+G+ R +A +++EM + P+ TYTAL+ C G + + ++ E
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
MVE+ + P + + + G+ +S A +LK S+P++ Y LIEN C
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT-YHTLIEN-CSNI 603
Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDM--------EASSYNPMIQHLCHNGQTGKAEIFF 403
+ + L+ K ++ + + ++YN MI C G KA +
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLY 663
Query: 404 RQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRK 462
++++K G +L V L++ KEG + ++ + R +A+ L+E R+
Sbjct: 664 KEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHRE 723
Query: 463 GEPADAKTALDSMIEDGHSP 482
G L M +DG P
Sbjct: 724 GNMDVVLDVLAEMAKDGFLP 743
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 218/464 (46%), Gaps = 14/464 (3%)
Query: 72 LNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDA 131
++ A + +M + V + + +LI + G + ++ +FD M+ G +V +Y+
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 132 LFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRG 191
L + + + M +G+EP +YNV++ G +++ +M RG
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
SLD VTYNT+I GY + +A + AEM + P+VI+YT++I + A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 252 RIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGV 311
D+M+ + PN TYT L+ G G M E +VLREM + P + + L+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT-YNALING 424
Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILR 371
C +G + A VL+ M + + Y ++ FC++ D A+++ ++VEK I +
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI--K 482
Query: 372 PQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNP 430
P + +Y+ +IQ C +T +A + ++++ G+ D + LI + EG+
Sbjct: 483 PDTI------TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 431 DSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSV 490
+ A ++ M +GV D Y LI ++ +AK L + + P+ + ++
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 491 MESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
+E+ + ++ ++K KG+ D ++ E++L + H
Sbjct: 597 IENC-SNIEFKSVVSLIKGFCMKGMMTEAD---QVFESMLGKNH 636
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 169/694 (24%), Positives = 303/694 (43%), Gaps = 72/694 (10%)
Query: 14 IRALVPQFDHNL-VYNVLHGAKNSEHALQFFRWVER----AGLFNHDRETHLKMIEILGR 68
+R+ P+ ++ +YN+L + E ++F W+ + G+ +L +I L
Sbjct: 101 VRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNL-LIRALCD 159
Query: 69 VGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKS 128
++ AR + +MP+KG + +E F +L+ Y K G+ + +++ + M+ GV +
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219
Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGI------------------------------- 157
Y+ + R GR +++ KM EG+
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 158 --------EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRF 209
P TYN+ML GF LE A FE ++ + +YN + G R
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 210 KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
K EAE + +M +K I P++ SY ++ G + DA I MK V P+AVTY
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 270 TALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
LL G C GK+ + +L+EM+ P + + LL K G ++ A ++L+ M
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI-LLHSLWKMGRISEAEELLRKMN 458
Query: 330 RLSIPTEAGHYGILIENFCKAEMYDRAIKL-----------LDKLVEKEIILRPQSTLDM 378
+ I+++ C + D+AI++ L L I L S ++
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 379 EA----SSYNPMIQHLCHNGQTGKAEIFFRQLM-KKGVLDPVAFNNLIRGHSKEGNPDSA 433
+Y+ ++ LC G+ +A+ F ++M +K D VA+N I K+G SA
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
F ++K M ++G + + Y LI K + + +D M E G SP + + ++
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL------MRGHVEEALGRIDLMMQ 547
L E +V+ A+ ++ M++K + N+ ++EA M V E I +
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE 698
Query: 548 SGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYS 607
F+ LL+ G+ + A +LL+ L R + Y+ ++++L + A
Sbjct: 699 GLYSLMFNELLAA----GQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754
Query: 608 ILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQAD 641
IL K++++G D + +I GL + GN K+A+
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEAN 788
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 226/512 (44%), Gaps = 59/512 (11%)
Query: 94 FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
+ ++++ + K G+++++ +F+ +++ S++SY+ + ++R G+++ A+ +M
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
+GI P+ ++YN+++ G L A MK G+ D VTY +++GY K+D
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
A+ L EM N P + ++ + R +A + +M + VT ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 274 PGLCDAG---KMVEVQKVLR--------EMVERYIPPKDNSV-----------FMKLLGV 311
GLC +G K +E+ K +R + YI D+S+ + LL
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 312 QCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK----- 366
CK+G A ++ M+ + ++ Y I I +FCK A ++L + +K
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 367 -----EIIL-----------------RPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
+IL + + +YN IQ+LC + A
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 405 QLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI----VKIMGRRGVPRDADAYICLIESY 459
++M+K + V +F LI K + D A E+ V I G++ Y +
Sbjct: 654 EMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK-----EGLYSLMFNEL 708
Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
L G+ A L+++++ G + L++ ++ESL + ++ AS ++ M+++G +
Sbjct: 709 LAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDP 768
Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
+ +++ L G+ +EA D MM+ SV
Sbjct: 769 AALMPVIDGLGKMGNKKEANSFADKMMEMASV 800
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 167/378 (44%), Gaps = 33/378 (8%)
Query: 62 MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
++ L ++G+++ A +L M +KG D ++++ G + ++++I M+ G
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 122 -------------------VERS----VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
+E + + +Y L + + GR+ AK F +M+ E ++
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
P YN+ + F K+ +A R +DM+ +G + TYN++I G ++ E L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
EMKEK I P + +Y T I+ E+ +DA + DEM ++ PN ++ L+ C
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
Q+V V I + ++ + +G L A ++L+A++
Sbjct: 677 VPDFDMAQEVFETAVS--ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734
Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
Y L+E+ CK + + A +L K++++ P + + P+I L G +
Sbjct: 735 LYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALM--------PVIDGLGKMGNKKE 786
Query: 399 AEIFFRQLMKKGVLDPVA 416
A F ++M+ + VA
Sbjct: 787 ANSFADKMMEMASVGEVA 804
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 162/376 (43%), Gaps = 49/376 (13%)
Query: 284 EVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGH---Y 340
E+Q++ ++ I S + ++ + KS H++ A + ++R P Y
Sbjct: 57 EIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQ-LVRSRFPENKPSVYLY 115
Query: 341 GILIENFCKAEMYDRAIKLLDKLVEKEII--LRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
+L+E+ K +R ++ + L + ++ + PQ+ ++N +I+ LC +
Sbjct: 116 NLLLESCIK----ERRVEFVSWLYKDMVLCGIAPQTY------TFNLLIRALCDSSCVDA 165
Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
A F ++ +KG + F L+RG+ K G D E++ M GV + Y ++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
S+ R+G D++ ++ M E+G P F S + +L ++G+V ASR+ M
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM------- 278
Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFC 577
++E LG + + S+ ++ +L + G A L +
Sbjct: 279 ----------------ELDEYLG----LPRPNSI-TYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 578 LGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNT 637
D + L SY L L+ GK + A ++L ++ +KG S + L+ GL + G
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 638 KQADILSRMIRGEMSR 653
A + I G M R
Sbjct: 378 SDA----KTIVGLMKR 389
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 236/518 (45%), Gaps = 13/518 (2%)
Query: 61 KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
K++ + ++ K + + M G+ + + +LI + ++ + ++ + M +L
Sbjct: 86 KLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKL 145
Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
G E + + ++L R A +M+ G +P T+N ++ G F + A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
+ + M +G D+VTY ++NG + +D A L +M++ IEP V+ Y T+I
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
+ +DAL +F EM + ++PN VTY +L+ LC+ G+ + ++L +M+ER I P
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP- 324
Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
+ F L+ K G L A + MI+ SI + Y LI FC + D A +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
+ ++ K+ P +YN +I+ C + + FR++ ++G++ + V +
Sbjct: 385 ELMISKDCF--PN------VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
LI G + D+A + K M GV D Y L++ G+ A + +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
P + ++E + + G+V+ + S+ KGVK N+ ++ +G EEA
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 540 GRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
M + G +P+ +++L+ G A+ +L+
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 212/463 (45%), Gaps = 10/463 (2%)
Query: 53 NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
+H+ T+ +I R +L+ A +L M K G + D L+ + + ++V
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
+ M ++G + +++ L + R R A ++M+ +G +P TY +++ G
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
++ A+ + M+ I VV YNT+I+ +K +++A LF EM K I P V+
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
+Y ++I+ R DA R+ +M + PN VT++AL+ GK+VE +K+ EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
++R I P D + L+ C L+ A + + MI Y LI+ FCKA+
Sbjct: 353 IKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
D ++L ++ ++ ++ +Y +I + A+I F+Q++ GVL
Sbjct: 412 VDEGMELFREMSQRGLV--------GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 413 -DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
D + ++ L+ G G ++A + + + R + D Y +IE + G+ D
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
S+ G P + ++M G + A + + M E+G
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 201/410 (49%), Gaps = 11/410 (2%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D T+ ++ L + G ++ A +L M + ++ ++ +I++ V +++ +F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
M G+ +V +Y++L + + GR+ A R + M+ I P T++ ++ F
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
KL A + +++M R I D+ TY+++ING+ ++DEA+ +F M K+ P V++Y
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
T+IKG+ +R D+ + +F EM + N VTYT L+ G A + Q V ++MV
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
+ P D + LL C +G + A V + + R + + Y I+IE CKA +
Sbjct: 460 DGVLP-DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
L L K + +P +Y M+ C G +A+ FR++ ++G L D
Sbjct: 519 DGWDLFCSLSLKGV--KPN------VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
+N LIR H ++G+ ++ E+++ M DA I L+ + L G
Sbjct: 571 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVTNMLHDG 619
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 213/445 (47%), Gaps = 12/445 (2%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
++L+ HG + S+ + VE + D T +I L R + + A ++ M
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMG--YQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
KG Q D + +++ K+G + ++ + M+Q +E V Y+ + +
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNV 272
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
A F +M ++GI P TYN ++ + A R DM R I+ +VVT++ +
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
I+ + + K+ EAEKL+ EM +++I+P + +Y+++I G+ +R D+A +F+ M S D
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
PN VTY L+ G C A ++ E ++ REM +R + + + L+ ++ + A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL-VGNTVTYTTLIHGFFQARECDNAQ 451
Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
V K M+ + + Y IL++ C + A+ + + L +S ++ + +
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL--------QRSKMEPDIYT 503
Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMG 441
YN MI+ +C G+ F L KGV + V + ++ G ++G + A + + M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 442 RRGVPRDADAYICLIESYLRKGEPA 466
G D+ Y LI ++LR G+ A
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKA 588
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 212/492 (43%), Gaps = 36/492 (7%)
Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
+ ++V +F M + S+ + L I + ++ + +M + GI +TY++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
++ F +L A+ M G D+VT N+++NG+ ++ +A L +M E
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
+P ++ T+I G RA +A+ + D M +P+ VTY ++ GLC G +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
+L++M + I P ++ ++ C ++N A ++ M I Y LI
Sbjct: 242 SLLKKMEQGKIEPG-VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRP-----------------------------QSTLD 377
C + A +LL ++E++I P + ++D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKI--NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
+ +Y+ +I C + + +A+ F ++ K + V +N LI+G K D E+
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
+ M +RG+ + Y LI + + E +A+ M+ DG P + +++ L
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN--- 553
+G+V+TA V + + ++ ++ ++E + G VE+ + G PN
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 554 FDSLLSVLSEKG 565
+ +++S KG
Sbjct: 539 YTTMMSGFCRKG 550
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/516 (20%), Positives = 213/516 (41%), Gaps = 50/516 (9%)
Query: 175 LKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
LKL+ A+ F DM KSR +V ++ +++ + K D L +M+ I + +
Sbjct: 60 LKLDDAVNLFGDMVKSRPFP-SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
Y+ +I + + AL + +M +P+ VT +LL G C ++ + ++ +MV
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
E P D+ F L+ + + A ++ M+ + YGI++ CK
Sbjct: 179 EMGYQP-DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
D A+ LL K+ + +I P + YN +I LC+ A F ++ KG+
Sbjct: 238 DLALSLLKKMEQGKI--EPGVVI------YNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
+ V +N+LIR G A ++ M R + + + LI++++++G+ +A+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
D MI+ P + S++ R+ A + + M+ K N+ +++
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 533 GHVEEALGRIDLMMQSGSVPN--------------------------------------F 554
V+E + M Q G V N +
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
LL L GK A+ + ++ D+ +Y +++ + AGK + + + +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
KG + + +++G ++G ++AD L R ++ E
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 157/648 (24%), Positives = 284/648 (43%), Gaps = 53/648 (8%)
Query: 26 VYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
V +L KN A F R + H + ++ L +NH I+ + +
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 86 GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL-GVERSVKSYDALFKLILRRGRYMM 144
+ DED+ +I++YGK + +++ +F M+++ G E +++SY+ L + +++
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
+ F + G+ P TYNV++ + E A F + M G DV +Y+T+IN
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192
Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV-------AVE------------ 245
+ K+D+A +LF EM E+ + P V Y +I G++ A+E
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252
Query: 246 -----------------RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKV 288
R DD L+I++ MK + + + TY++L+ GLCDAG + + + V
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 289 LREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
E+ ER D + +LG C+ G + + ++ + M + Y ILI+
Sbjct: 313 FNELDERK-ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLL 370
Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
+ D A + L P + ++Y I LC NG KA +++
Sbjct: 371 ENGKIDEATMIWR--------LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 409 K-GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
G LD A+ ++I K+ + A +VK M + GV ++ LI +R +
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482
Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
A L M ++G P + ++ L + G+ AS +K M+E G K +L + +L
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542
Query: 528 ALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCII 584
L ++ AL +QSG V + L+ L GK A+ ++ R+C
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602
Query: 585 DLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT-DWKSSDKLIAGL 631
+L +Y +++ G + N ++++ M K G+ D S + ++ GL
Sbjct: 603 NLVTYNTLMEGFFKVGDS-NRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 8/258 (3%)
Query: 21 FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNH-DRETHLKMIEILGRVGKLNHARCIL 79
F H L N G N AL + VE +G H D + +I+ L + +L A ++
Sbjct: 400 FIHGLCVN---GYVNK--ALGVMQEVESSG--GHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 80 LDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRR 139
+M K GV+ + + LI + + E+ M + G +V SY+ L + +
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 140 GRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTY 199
G++ A + +ML G +P TY+++L G K++ A+ + G+ DV+ +
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
N +I+G K+D+A + A M+ +N +++Y T+++G+ V ++ A I+ M
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 260 FDVKPNAVTYTALLPGLC 277
++P+ ++Y ++ GLC
Sbjct: 633 MGLQPDIISYNTIMKGLC 650
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 1/292 (0%)
Query: 70 GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
GK++ A I MP KG D+ + + I G V +++ + ++ G V +Y
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
++ + ++ R A +M G+E H N ++ G +L A F +M
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
G VV+YN +I G + K EA EM E +P + +Y+ ++ G + D
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
AL ++ + ++ + + + L+ GLC GK+ + V+ M R + + L+
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA-NLVTYNTLM 611
Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
K G N A + M ++ + + Y +++ C A++ D
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%)
Query: 62 MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
+I L R +L A L +M K G + + +LI K G E+ M + G
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
+ +K+Y L + R + +A +++ L G+E +N+++ G KL+ A+
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
+M+ R + ++VTYNT++ G+ + + A ++ M + ++P +ISY T++KG
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
A+ FD+ ++ + P T+ L+
Sbjct: 650 CMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 76/177 (42%)
Query: 66 LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
L + GK A + +M + G + D + +L+ + + +++++ Q G+E
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568
Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
V ++ L + G+ A M TYN ++ GFF A +
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWG 628
Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
M G+ D+++YNT++ G + + A + F + + I PTV ++ +++ V
Sbjct: 629 YMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 70/149 (46%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D +T+ ++ L R K++ A + + G++ D M +LI G + +++ +
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
M+ ++ +Y+ L + + G A + M G++P +YN ++ G +
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652
Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMI 203
+ A+ FF+D ++ GI V T+N ++
Sbjct: 653 RGVSYAMEFFDDARNHGIFPTVYTWNILV 681
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/543 (25%), Positives = 243/543 (44%), Gaps = 42/543 (7%)
Query: 21 FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
D + +++V+ K + L + +E G+ H+ T MI R KL+ A +
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGI-AHNLYTLSIMINCCCRCRKLSLAFSAMG 131
Query: 81 DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
+ K G + D F LI +G V E++++ D M ++G + ++ + +AL + G
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
+ A ++M+ G +P TY +L S + A+ M+ R I LD V Y+
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
+I+G + +D A LF EM+ K + +I YTT+I+G+ R DD ++ +M
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
+ P+ V ++AL+ GK+ E +++ +EM++R I P D + L+ CK L+
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP-DTVTYTSLIDGFCKENQLDK 370
Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL----------------- 363
A +L M+ + ILI +CKA + D ++L K+
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 364 ---------VEKEII-------LRPQSTLDMEASSYNPMIQHLCHNGQTGKA-EIFFRQL 406
V KE+ +RP + SY ++ LC NG+ KA EIF +
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRP------DIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
K LD +N +I G D A+++ + +GV D Y +I +KG +
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
+A M EDGHSP + ++ + +G ++++++ + G + V ++
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Query: 527 EAL 529
+ L
Sbjct: 605 DML 607
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 197/436 (45%), Gaps = 10/436 (2%)
Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
+LG E ++ L + GR A ++M+ G +PT T N ++ G L+ K+
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
A+ + M G + VTY ++ + + A +L +M+E+ I+ + Y+ +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
G D+A +F+EM+ K + + YT L+ G C AG+ + K+LR+M++R I
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
P D F L+ K G L A ++ K MI+ I + Y LI+ FCK D+A
Sbjct: 315 P-DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
+LD +V K ++N +I C FR++ +GV+ D V +
Sbjct: 374 MLDLMVSK--------GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
N LI+G + G + A E+ + M R V D +Y L++ GEP A + + +
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
++ ++ + +V A + S+ KGVK ++ ++ L +G + E
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 538 ALGRIDLMMQSGSVPN 553
A M + G PN
Sbjct: 546 ADLLFRKMEEDGHSPN 561
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/522 (22%), Positives = 230/522 (44%), Gaps = 48/522 (9%)
Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
+Y L + +K + A+ F++M ++ ++ + + R K+ D L +M
Sbjct: 39 SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM 98
Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
+ K I + + + MI + A ++ +P+ VT++ L+ GLC G++
Sbjct: 99 ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV 158
Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
E +++ MVE P ++ + G+ C +G ++ A ++ M+ YG
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGL-CLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
+++ CK+ A++LL K+ E++I ++A Y+ +I LC +G A
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKI--------KLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 403 FRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
F ++ KG D + + LIRG G D ++++ M +R + D A+ LI+ +++
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
+G+ +A+ MI+ G SP + + S+++ ++ ++ A+ ++ MV KG N+
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCL 578
++ +++ L M G V + +++L+ E GK A +L +
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 579 GRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI----ME-------------------- 614
R D+ SY+ +LD L G+ A I KI ME
Sbjct: 450 SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 509
Query: 615 -----------KGGVTDWKSSDKLIAGLNQEGNTKQADILSR 645
KG D K+ + +I GL ++G+ +AD+L R
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D T+ +I+ + +L+ A +L M KG + F +LI Y K ++ + +++F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
M GV +Y+ L + G+ +AK F +M+S + P +Y ++L G +
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 175 LKLETAIRFFEDMKS-----------------------------------RGISLDVVTY 199
+ E A+ FE ++ +G+ DV TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
N MI G + + EA+ LF +M+E P +Y +I+ ++ A + ++ +E+K
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 260 FDVKPNAVTYTALLPGLCDA 279
+A T ++ L D
Sbjct: 591 CGFSVDASTVKMVVDMLSDG 610
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 222/485 (45%), Gaps = 40/485 (8%)
Query: 26 VYNVLHGAKNSEHALQFF--RWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
V ++ K+ E ++ F E A + HD+ + M+ L K A +++ M
Sbjct: 19 VIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMK 78
Query: 84 KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
+ ED+ + YG+ +S+++F MK + S K+Y + +++ +
Sbjct: 79 IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLN 138
Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS-LKLETAIRFFEDMKSRGISLDVVTYNTM 202
+A +++ M G+ PT + NV++ + ++ ++ F +M RG D TY T+
Sbjct: 139 LAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTL 198
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
I+G RF ++DEA+KLF EM EK+ PTV++YT++I G + D+A+R +EMKS +
Sbjct: 199 ISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
+PN TY++L+ GLC G+ ++ ++ M+ R P + + L+ CK + A
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP-NMVTYTTLITGLCKEQKIQEAV 317
Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
++L M + +AG YG +I FC + A LD+++ I + T ++ +
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN-RLTWNIHVKT 376
Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
N +++ LC N P AF + M
Sbjct: 377 SNEVVRGLCAN-----------------------------------YPSRAFTLYLSMRS 401
Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
RG+ + + L++ +KGE A +D ++ DG P+ ++ ++ + V
Sbjct: 402 RGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGE 461
Query: 503 ASRVM 507
AS +
Sbjct: 462 ASDTL 466
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 176/392 (44%), Gaps = 31/392 (7%)
Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVIS---YTTMIKGYVAVERADDALRIFDEMKSFDVK 263
N+FK AE L MK IE V+S ++ +GY V R D+LR+F +MK FD
Sbjct: 65 NKFKA---AEDLIVRMK---IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCD 118
Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKS-GHLNAAA 322
P+ Y +L L + ++ K + M E +PP S+ + L+ C++ G ++A
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV-LIKALCRNDGTVDAGL 177
Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASS 382
+ M + ++ YG LI C+ D A KL ++VEK+ P +
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC--APT------VVT 229
Query: 383 YNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMG 441
Y +I LC + +A + ++ KG+ V +++L+ G K+G A E+ ++M
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
RG + Y LI ++ + +A LD M G P + L+ V+ + +
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349
Query: 502 TASRVMKSMVEKGVKEN---LDLVAKILEALLMRGHVEEALGR---IDLMMQSGS----V 551
A+ + M+ G+ N ++ K ++ RG R + L M+S V
Sbjct: 350 EAANFLDEMILGGITPNRLTWNIHVKTSNEVV-RGLCANYPSRAFTLYLSMRSRGISVEV 408
Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCI 583
+SL+ L +KG+ AV+L+D + CI
Sbjct: 409 ETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI 440
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 183/396 (46%), Gaps = 23/396 (5%)
Query: 172 FLSLKLETAIRF--FEDMKSR-GISLDVVTYNTMIN---GYNRFKKMDEAEKLFAEMKEK 225
++ L+L +A +F ED+ R I VV+ + +++ GY R + ++ ++F +MK+
Sbjct: 56 YMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
+ +P+ +Y T++ V + + A + + M+ + P + L+ LC V+
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 286 Q-KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
K+ EM +R P D+ + L+ C+ G ++ A + M+ Y LI
Sbjct: 176 GLKIFLEMPKRGCDP-DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
C ++ D A++ L+++ K I + +Y+ ++ LC +G++ +A F
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGI--------EPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
+M +G + V + LI G KE A E++ M +G+ DA Y +I +
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAIS 346
Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA---SRVMK---SMVEKGVKE 517
+ +A LD MI G +P + +++ E R A SR SM +G+
Sbjct: 347 KFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISV 406
Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
++ + +++ L +G ++A+ +D ++ G +P+
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPS 442
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 14/268 (5%)
Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSK-EGNPDSAF 434
D +Y ++ L Q A F++ + + G+ VA N LI+ + +G D+
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 435 EIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
+I M +RG D+ Y LI R G +AK M+E +P + S++ L
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 495 FEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN- 553
V A R ++ M KG++ N+ + +++ L G +A+ ++MM G PN
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 554 --FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
+ +L++ L ++ K AV+LLD + D Y KV+ A K A + L +
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 612 IMEKGGVT----DW----KSSDKLIAGL 631
M GG+T W K+S++++ GL
Sbjct: 358 -MILGGITPNRLTWNIHVKTSNEVVRGL 384
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 7/211 (3%)
Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
D + + Y R P D+ M + P+ + +V+ L E+ ++ A + K+
Sbjct: 87 DILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN 146
Query: 510 MVEKGVKENLDLVAKILEALLMR-GHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKG 565
M E G+ + + +++AL G V+ L M + G P+ + +L+S L G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 566 KTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSD 625
+ A KL + +DC + +Y +++ L + A L ++ KG + +
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 626 KLIAGLNQEGNTKQADILSRMIRGEMSRGSQ 656
L+ GL ++G + QA L M+ M+RG +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMM---MARGCR 294
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/609 (24%), Positives = 280/609 (45%), Gaps = 20/609 (3%)
Query: 30 LHGAKNSEHALQFFRWVERAGLFN--HDRETHLKMIEILGRVGKLNHARCILLDMPKKGV 87
L +++ + +F+ V AG N H ET M+E L GKL + M K+ +
Sbjct: 92 LKSFPDTDSSFSYFKSV--AGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRII 149
Query: 88 QWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKR 147
+ D + + + +S KG ++++ M++ G + SY+ L L+L+ A
Sbjct: 150 KRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAME 209
Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYN 207
+ +M+ EG P+ TY+ ++ G +++ + ++M++ G+ +V T+ I
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269
Query: 208 RFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAV 267
R K++EA ++ M ++ P V++YT +I + D A +F++MK+ KP+ V
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329
Query: 268 TYTALLPGLCDAGKMVEVQKVLREM-VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
TY LL D + V++ EM + ++P D F L+ CK+G+ A D L
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP--DVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPM 386
M I Y LI + D A++L + + + ++P A +Y
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM--ESLGVKPT------AYTYIVF 439
Query: 387 IQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
I + +G + A F ++ KG+ + VA N + +K G A +I + G+
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
D+ Y +++ Y + GE +A L M+E+G P + S++ +L++ RV A +
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
+ M E +K + +L L G ++EA+ + M+Q G PN F++L L
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
+ + A+K+L + C+ D+ +Y ++ L+ G+ A F M+K D+
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC-FFHQMKKLVYPDFV 678
Query: 623 SSDKLIAGL 631
+ L+ G+
Sbjct: 679 TLCTLLPGV 687
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 165/690 (23%), Positives = 282/690 (40%), Gaps = 77/690 (11%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+ ++ + L A+ + A + F + + G DR T++ +++ L+ + +M
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
K G D F +L+++ K G E+ D+M+ G+ ++ +Y+ L +LR R
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS--------- 193
A F M S G++PT +TY V + + S +A+ FE MK++GI+
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 194 --------------------------LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
D VTYN M+ Y++ ++DEA KL +EM E
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
EP VI ++I +R D+A ++F MK +KP VTY LL GL GK+ E +
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
+ MV++ PP + F L CK+ + A +L M+ + + Y +I
Sbjct: 595 LFEGMVQKGCPP-NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Query: 348 CKAEMYDRAIKL---LDKLVEKEII----LRPQSTLDMEASSYNPMIQHLCHNGQTGKAE 400
K A+ + KLV + + L P +I + +N A
Sbjct: 654 VKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN 713
Query: 401 IFFRQLM-----KKGVLDPVAFNN-----------------LIRGHSKEGNPDSA---FE 435
+F+ L+ + G+ + V+F+ +IR K N A FE
Sbjct: 714 LFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFE 773
Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
K GV Y LI L A+ + G P + + ++++
Sbjct: 774 --KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG-RIDLMMQ---SGSV 551
+ G++ + K M + N ++ L+ G+V++AL DLM S +
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 552 PNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFK 611
+ L+ LS+ G+ A +L + L C + A Y +++ AG+ +A LFK
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA-DAACALFK 950
Query: 612 IMEKGGV-TDWKSSDKLIAGLNQEGNTKQA 640
M K GV D K+ L+ L G +
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 142/635 (22%), Positives = 274/635 (43%), Gaps = 61/635 (9%)
Query: 66 LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
L + G+ A+ I + G+ D + ++++ Y K G + E++K+ M + G E
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
V ++L + + R A + F +M ++PT TYN +L G + K++ AI FE
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
M +G + +T+NT+ + + ++ A K+ +M + P V +Y T+I G V
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657
Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL---------------- 289
+ +A+ F +MK V P+ VT LLPG+ A + + K++
Sbjct: 658 QVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFW 716
Query: 290 --------------------REMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMI 329
+V I +S+ + ++ CK +++ A + +
Sbjct: 717 EDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFT 776
Query: 330 R-LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM-EASSYNPMI 387
+ L + + Y +LI +A+M + + +++ L+ +ST + + ++YN ++
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIE---------IAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 388 QHLCHNGQTGKAEIFFRQLMKKGV----LDPVAFNNLIRGHSKEGNPDSAFEIV-KIMGR 442
G++GK + F + + + N +I G K GN D A ++ +M
Sbjct: 828 DAY---GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
R A Y LI+ + G +AK + M++ G P +++ ++ + G
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
A + K MV++GV+ +L + +++ L M G V+E L + +SG P+ +++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 563 EKGKTI----AAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGV 618
GK+ A V + R DL +Y ++ L AG A I +I G
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 619 TDWKSSDKLIAGLNQEGNTKQA-DILSRMIRGEMS 652
+ + + LI G + G + A + M+ G S
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1099
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 155/342 (45%), Gaps = 38/342 (11%)
Query: 145 AKRYFNKMLSE-GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
A+ F K + G++P TYN+++ G + +E A F +KS G DV TYN ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF-DEMKSFDV 262
+ Y + K+DE +L+ EM E I++ +I G V DDAL ++ D M D
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
P A TY L+ GL +G++ E +++ M++ P + +++ L+ K+G +AA
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP-NCAIYNILINGFGKAGEADAAC 946
Query: 323 DVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL------ 376
+ K M++ + + Y +L++ C D + +L KE L P
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL--KESGLNPDVVCYNLIIN 1004
Query: 377 ----------------DMEAS--------SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
+M+ S +YN +I +L G +A + ++ + G L
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG-L 1063
Query: 413 DP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
+P FN LIRG+S G P+ A+ + + M G + Y
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
HN+V + L A N + AL + + F+ T+ +I+ L + G+L A+ + M
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
G + + ++ +LI +GK G + +F M + GV +K+Y L + GR
Sbjct: 918 LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK-SRGISLDVVTYNT 201
YF ++ G+ P YN+++ G S +LE A+ F +MK SRGI+ D+ TYN+
Sbjct: 978 DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037
Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
+I ++EA K++ E++ +EP V ++ +I+GY + + A ++ M +
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Query: 262 VKPNAVTYTAL 272
PN TY L
Sbjct: 1098 FSPNTGTYEQL 1108
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 150/339 (44%), Gaps = 15/339 (4%)
Query: 15 RALVPQFDHNL-------VYNVLHG----AKNSEHALQFFRWVERAGLFNHDRETHLKMI 63
R L +F +L YN+L G A E A F V+ G D T+ ++
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI-PDVATYNFLL 827
Query: 64 EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF-DIMKQLGV 122
+ G+ GK++ + +M + + ++I K G V +++ ++ D+M
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 123 ERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIR 182
+ +Y L + + GR AK+ F ML G P YN+++ GF + + + A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
F+ M G+ D+ TY+ +++ ++DE F E+KE + P V+ Y +I G
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 243 AVERADDALRIFDEMK-SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
R ++AL +F+EMK S + P+ TY +L+ L AG + E K+ E+ + P +
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP-N 1066
Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHY 340
F L+ SG A V + M+ G Y
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+N++ N A ++ A F+ + + G+ D +T+ +++ L VG+++ ++
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGV-RPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMK-QLGVERSVKSYDALFKLILRRGR 141
+ G+ D + ++I GK ++E++ +F+ MK G+ + +Y++L + G
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
A + +N++ G+EP T+N ++ G+ LS K E A ++ M + G S + TY
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 202 MIN 204
+ N
Sbjct: 1108 LPN 1110
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 210/440 (47%), Gaps = 16/440 (3%)
Query: 25 LVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPK 84
L++ + K SE + V+R D T+ ++ L + G ++ A +L M
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGC--QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 85 KGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMM 144
++ + +F +I+S K V+ +V +F M+ G+ +V +Y++L + GR+
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
A R + ML + I P T+N ++ FF KL A + E+M R I D +TYN +IN
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
G+ ++DEA+++F M K+ P + +Y T+I G+ +R +D + +F EM +
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
N VTYT ++ G AG Q V ++MV + P D + LL C G L+ A +
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV-PTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 325 LKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYN 384
K + + + Y +IE CKA A L L ++P + +YN
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS-----IKP------DVVTYN 539
Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
MI LC +A+ FR++ + G L + +N LIR + ++ + ++ E++K M
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 444 GVPRDADAYICLIESYLRKG 463
G DA I L+ + L G
Sbjct: 600 GFVGDAST-ISLVTNMLHDG 618
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 224/494 (45%), Gaps = 16/494 (3%)
Query: 64 EILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
++L V K+N ++ M G+ D + + I + ++ + ++ + M +L
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
G E + + +L R A ++M+ G +P T+ ++ G FL K A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
+ + M RG D+VTY T++NG + +D A L +M+ I+ V+ + T+I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
+ A+ +F EM++ ++PN VTY +L+ LC+ G+ + ++L M+E+ I P
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP- 326
Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
+ F L+ K G L A + + MI+ SI + Y +LI FC D A ++
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNN 419
+V K+ + Q +YN +I C + FR++ ++G++ + V +
Sbjct: 387 KFMVSKDCLPNIQ--------TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
+I+G + G+ DSA + K M VP D Y L+ G+ A + +
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
++ +++E + + G+V A + S+ +K ++ ++ L + ++EA
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 540 GRIDLMMQSGSVPN 553
M + G++PN
Sbjct: 556 DLFRKMKEDGTLPN 569
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 205/467 (43%), Gaps = 13/467 (2%)
Query: 53 NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
+HD T+ I R +L+ A +L M K G + D L+ Y + ++V
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
+ D M ++G + ++ L + + A ++M+ G +P TY ++ G
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
++ A+ M++ I +VV +NT+I+ +++ ++ A LF EM+ K I P V+
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
+Y ++I R DA R+ M + PN VT+ AL+ GK+VE +K+ EM
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
++R I P D + L+ C L+ A + K M+ Y LI FCK +
Sbjct: 355 IQRSIDP-DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
+ ++L ++ ++ ++ +Y +IQ G A++ F+Q++ V
Sbjct: 414 VEDGVELFREMSQRGLV--------GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
D + ++ L+ G G D+A I K + + + + Y +IE + G+ +A
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 518
S+ P + +++ L +Q A + + M E G N
Sbjct: 526 FCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPN 569
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 211/449 (46%), Gaps = 12/449 (2%)
Query: 52 FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESV 111
+ D T +I L K + A ++ M ++G Q D + ++ K+G + ++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
+ + M+ ++ +V ++ + + + +A F +M ++GI P TYN ++
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
+ A R +M + I+ +VVT+N +I+ + + K+ EAEKL EM +++I+P
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
I+Y +I G+ R D+A ++F M S D PN TY L+ G C ++ + ++ RE
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 292 MVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
M +R + + + ++ ++G ++A V K M+ +PT+ Y IL+ C
Sbjct: 424 MSQRGL-VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
D A+ + L + E +++ YN MI+ +C G+ G+A F L K
Sbjct: 483 KLDTALVIFKYLQKSE--------MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP- 533
Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
D V +N +I G + A ++ + M G ++ Y LI + LR + A +
Sbjct: 534 -DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRV 500
+ M G +S S++ ++ DGR+
Sbjct: 593 IKEMRSSGFVGDASTI-SLVTNMLHDGRL 620
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/546 (22%), Positives = 234/546 (42%), Gaps = 19/546 (3%)
Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
V ++V +F M + S+ ++ L + + ++ + +M + GI +TY++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
+ F +L A+ M G D+VT ++++NGY K++ +A L +M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
+P ++TT+I G +A +A+ + D+M +P+ VTY ++ GLC G +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 287 KVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
+L +M I K N V F ++ CK H+ A D+ M I Y LI
Sbjct: 244 NLLNKMEAARI--KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
C + A +LL ++EK+I + ++N +I G+ +AE +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKI--------NPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 406 LMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
++++ + D + +N LI G D A ++ K M + + Y LI + +
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
D M + G + + ++++ F+ G +A V K MV V ++ +
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
+L L G ++ AL + +S N +++++ + + GK A L FC
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL--FC-SLS 530
Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI-AGLNQEGNTKQA 640
D+ +Y ++ L + A + K+ E G + + + + LI A L A
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 641 DILSRM 646
+++ M
Sbjct: 591 ELIKEM 596
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/516 (21%), Positives = 211/516 (40%), Gaps = 57/516 (11%)
Query: 175 LKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
+K++ A+ F DM KSR +V +N +++ + K + L +M+ I + +
Sbjct: 62 IKVDDAVDLFGDMVKSRPFP-SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
Y+ I + + AL + +M +P+ VT ++LL G C + ++ + ++ +MV
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 294 ERYIPPKDNSVFMKLL----------------------GVQ-------------CKSGHL 318
E P D F L+ G Q CK G +
Sbjct: 181 EMGYKP-DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
+ A ++L M I + +I++ CK + A+ L ++ K I RP
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI--RPN----- 292
Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEI 436
+YN +I LC+ G+ A +++K + +P V FN LI KEG A ++
Sbjct: 293 -VVTYNSLINCLCNYGRWSDASRLLSNMLEKKI-NPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
+ M +R + D Y LI + +AK M+ P + +++ +
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 497 DGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---- 552
RV+ + + M ++G+ N I++ G + A + M S VP
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA-QMVFKQMVSNRVPTDIM 469
Query: 553 NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKI 612
+ LL L GK A+ + + + +++ Y +++ + AGK A+ + +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 613 MEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
K V + + +I+GL + ++AD L R ++
Sbjct: 530 SIKPDVVTYNT---MISGLCSKRLLQEADDLFRKMK 562
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 211/441 (47%), Gaps = 13/441 (2%)
Query: 24 NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
L++ + K SE R V+R N T+ ++ L + G + A +L M
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPN--LVTYGVVVNGLCKRGDTDLALNLLNKME 252
Query: 84 KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
++ D +F +I+S K V +++ +F M+ G+ +V +Y +L + GR+
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312
Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
A + + M+ + I P T+N ++ F K A + ++DM R I D+ TYN+++
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
NG+ ++D+A+++F M K+ P V++Y T+IKG+ +R +D +F EM +
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
+ VTYT L+ GL G QKV ++MV +PP D + LL C +G L A +
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTYSILLDGLCNNGKLEKALE 491
Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
V M + I + Y +IE CKA D L L K + +P +Y
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV--KPN------VVTY 543
Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
N MI LC +A +++ + G L + +N LIR H ++G+ ++ E+++ M
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Query: 443 RGVPRDADAYICLIESYLRKG 463
DA + I L+ + L G
Sbjct: 604 CRFVGDA-STIGLVANMLHDG 623
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 230/520 (44%), Gaps = 48/520 (9%)
Query: 94 FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
F L+ + K + + + M++L + + +Y+ L RR + +A KM+
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
G EP+ T + +L G+ ++ A+ + M G D +T+ T+I+G K
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 214 EAEKLFAEMKEKNIEPTVISY-----------------------------------TTMI 238
EA L M ++ +P +++Y T+I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
DDAL +F EM++ ++PN VTY++L+ LC G+ + ++L +M+E+ I
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
P + F L+ K G A + MI+ SI + Y L+ FC + D+A +
Sbjct: 328 P-NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
+ + +V K+ P + +YN +I+ C + + FR++ +G++ D V +
Sbjct: 387 MFEFMVSKDCF--P------DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
LI+G +G+ D+A ++ K M GVP D Y L++ G+ A D M +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
++ +++E + + G+V + S+ KGVK N+ ++ L + ++E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
A + M + G +PN +++L+ G A+ +L+
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 215/481 (44%), Gaps = 10/481 (2%)
Query: 54 HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
H T+ +I R +++ A +L M K G + L+ Y + ++V +
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
D M ++G ++ L + + A ++M+ G +P TY V++ G
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
+ A+ M++ I DVV +NT+I+ +++ +D+A LF EM+ K I P V++
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
Y+++I + R DA ++ +M + PN VT+ AL+ GK VE +K+ +M+
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
+R I P D + L+ C L+ A + + M+ + Y LI+ FCK++
Sbjct: 358 KRSIDP-DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-L 412
+ +L ++ + ++ + +Y +IQ L H+G A+ F+Q++ GV
Sbjct: 417 EDGTELFREMSHRGLV--------GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 413 DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTAL 472
D + ++ L+ G G + A E+ M + + D Y +IE + G+ D
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 473 DSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR 532
S+ G P + +++ L +Q A ++K M E G N ++ A L
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRD 588
Query: 533 G 533
G
Sbjct: 589 G 589
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 209/444 (47%), Gaps = 12/444 (2%)
Query: 24 NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
+L+ HG + S+ + VE + D T +I L K + A ++ M
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 84 KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
++G Q + + V++ K+G ++ + + M+ +E V ++ + + +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
A F +M ++GI P TY+ ++ + A + DM + I+ ++VT+N +I
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
+ + + K EAEKL+ +M +++I+P + +Y +++ G+ +R D A ++F+ M S D
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
P+ VTY L+ G C + ++ + ++ REM R + D + L+ G + A
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL-VGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
V K M+ +P + Y IL++ C ++A+++ D + + EI L + Y
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL--------DIYIY 508
Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
MI+ +C G+ F L KGV + V +N +I G + A+ ++K M
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 443 RGVPRDADAYICLIESYLRKGEPA 466
G ++ Y LI ++LR G+ A
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKA 592
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/529 (23%), Positives = 231/529 (43%), Gaps = 15/529 (2%)
Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
S+ ++ L I + ++ + KM I +TYN+++ F ++ A+
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
M G +VT ++++NGY K++ +A L +M E P I++TT+I G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
+A +A+ + D M +PN VTY ++ GLC G +L +M I D +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA-DVVI 262
Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
F ++ CK H++ A ++ K M I Y LI C + A +LL ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIR 422
EK+I + ++N +I G+ +AE + ++K+ + DP +N+L+
Sbjct: 323 EKKI--------NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI-DPDIFTYNSLVN 373
Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
G D A ++ + M + D Y LI+ + + D M G
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
+ + ++++ LF DG A +V K MV GV ++ + +L+ L G +E+AL
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 543 DLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAA 599
D M +S + + +++ + + GK L + ++ +Y ++ L +
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 600 GKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
AY++L K+ E G + + + + LI ++G+ + L R +R
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/525 (21%), Positives = 213/525 (40%), Gaps = 56/525 (10%)
Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGY 206
Y+ + S G Y +L +KL+ AI F M KSR + +V +N +++
Sbjct: 41 YWGRAFSSG----SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLP-SIVEFNKLLSAI 95
Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
+ KK D L +M+ I + +Y +I + + AL + +M +P+
Sbjct: 96 AKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSI 155
Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL----------------- 309
VT ++LL G C ++ + ++ +MVE P D F L+
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP-DTITFTTLIHGLFLHNKASEAVALVD 214
Query: 310 -----GVQ-------------CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAE 351
G Q CK G + A ++L M I + + +I++ CK
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274
Query: 352 MYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
D A+ L ++ K I RP +Y+ +I LC G+ A +++K +
Sbjct: 275 HVDDALNLFKEMETKGI--RPN------VVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 412 LDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAK 469
+P V FN LI KEG A ++ M +R + D Y L+ + AK
Sbjct: 327 -NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 470 TALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEAL 529
+ M+ P + ++++ + RV+ + + + M +G+ + +++ L
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 530 LMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDL 586
G + A M+ G P+ + LL L GK A+++ D+ + +D+
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 587 ASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGL 631
Y +++ + AGK + + + + KG + + + +I+GL
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 146/623 (23%), Positives = 279/623 (44%), Gaps = 51/623 (8%)
Query: 33 AKNSEHALQFFR-WVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDE 91
++N E A F+R +E N + L +E ++ K A +L M K+G ++
Sbjct: 85 SRNHELAFSFYRKMLETDTFINFVSLSGL--LECYVQMRKTGFAFGVLALMLKRGFAFNV 142
Query: 92 DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNK 151
+L++ + ++V + M++ + V SY+ + + A N+
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 152 MLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKK 211
M G + T+ +++ F + K++ A+ F ++MK G+ D+V Y ++I G+ +
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 212 MDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTA 271
+D + LF E+ E+ P I+Y T+I+G+ + + +A IF+ M V+PN TYT
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 272 LLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKAMIR 330
L+ GLC GK E ++L M+E+ P N+V + ++ CK G + A ++++ M +
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEP--NAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
+ Y IL+ C D A KLL ++L+ S D + SYN +I L
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLL------YLMLKDSSYTDPDVISYNALIHGL 434
Query: 391 CHNGQTGKAEIFFRQLMKK-GVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
C + +A + L++K G D V N L+ K G+ + A E+ K + + R++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 450 DAYI-----------------------------------CLIESYLRKGEPADAKTALDS 474
D Y CL+ S ++G A +
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 475 MIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGH 534
M D + P F +++ + G +++A ++ M G+ +L +K++ L G+
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 535 VEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
++EA+ D M+ SG P+ DS+L +G+T +L+ + +D ++D
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT 674
Query: 592 VLDALLAAGKTLNAYSILFKIME 614
V+D + + ++ L ++ +
Sbjct: 675 VMDYMCNSSANMDLAKRLLRVTD 697
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 142/544 (26%), Positives = 238/544 (43%), Gaps = 46/544 (8%)
Query: 21 FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
++HN++ L A+ R + R L D ++ +I +L A +
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLM-PDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 81 DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
+M G W + +LI+++ K G + E++ MK +G+E + Y +L + G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
K F+++L G P TYN ++ GF +L+ A FE M RG+ +V TY
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
+I+G K EA +L M EK+ EP ++Y +I DA+ I + MK
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE--RYIPP-------------KDNSVF 305
+P+ +TY LL GLC G + E K+L M++ Y P K+N +
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 306 MK---------------------LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILI 344
LL K+G +N A ++ K + I + Y +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 345 ENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFR 404
+ FCK M + A LL K+ E L+P S D YN ++ LC G +A F
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSE--LQP-SVFD-----YNCLLSSLCKEGSLDQAWRLFE 553
Query: 405 QLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
++ + D V+FN +I G K G+ SA ++ M R G+ D Y LI +L+ G
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613
Query: 464 EPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVA 523
+A + D M++ G P + + SV++ G + ++K +V+K + + +L
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTC 673
Query: 524 KILE 527
+++
Sbjct: 674 TVMD 677
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 204/470 (43%), Gaps = 24/470 (5%)
Query: 176 KLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYT 235
+L+ A+ F+ G SL N ++ R + + A + +M E + +S +
Sbjct: 53 QLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 236 TMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC---DAGKMVEVQKVLREM 292
+++ YV + + A + M N + LL GLC + GK V +LREM
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVS---LLREM 168
Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
+ P S + G C+ L A ++ M +GILI+ FCKA
Sbjct: 169 RRNSLMPDVFSYNTVIRGF-CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL 412
D A+ L KE+ L+ + Y +I+ C G+ + + F +++++G
Sbjct: 228 MDEAMGFL-----KEMKFMG---LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD- 278
Query: 413 DPVA--FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKT 470
P A +N LIRG K G A EI + M RGV + Y LI+ G+ +A
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 471 ALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALL 530
L+ MIE P + + ++ L +DG V A +++ M ++ + + +L L
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 531 MRGHVEEALGRIDLMMQSGS-----VPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
+G ++EA + LM++ S V ++++L+ L ++ + A+ + D + + D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 586 LASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
+ +L++ L AG A + +I + V + + +I G + G
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 204/429 (47%), Gaps = 14/429 (3%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+ LV + K +E L + VE N T+ ++ ++ + G+ A +L M
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNA--VTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
++ ++ D + ++I+ K G + + +F+ M+ G+ ++ +Y+ L GR+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
+ M+ I P T++V++ F KL A ++M RGI+ D +TY ++
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
I+G+ + +D+A ++ M K +P + ++ +I GY R DD L +F +M V
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSGHLNAA 321
+ VTY L+ G C+ GK+ +++ +EMV R +PP N V K LL C +G A
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP--NIVTYKILLDGLCDNGESEKA 492
Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
++ + + + + + G Y I+I C A D A L L P +
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL--------PLKGVKPGVK 544
Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
+YN MI LC G +AE+ FR++ + G D +N LIR H +G+ + ++++ +
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Query: 441 GRRGVPRDA 449
R G DA
Sbjct: 605 KRCGFSVDA 613
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/543 (24%), Positives = 236/543 (43%), Gaps = 30/543 (5%)
Query: 15 RALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNH 74
R L D + +++ + K + L + +E G+ H+ T MI R KL
Sbjct: 83 RPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI-AHNLYTLSIMINCFCRCRKLCL 141
Query: 75 ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
A + + K G + + F LI +G V E++++ D M ++G + + + + L
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
+ G+ A +KM+ G +P TY +L S + A+ M+ R I L
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
D V Y+ +I+G + +D A LF EM+ K I +I+Y +I G+ R DD ++
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
+M + PN VT++ L+ GK+ E +++ +EM+ R I P D + L+ CK
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP-DTITYTSLIDGFCK 380
Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII----- 369
HL+ A ++ M+ + ILI +CKA D ++L K+ + ++
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 370 -------------LRPQSTLDMEASS---------YNPMIQHLCHNGQTGKA-EIFFRQL 406
L L E S Y ++ LC NG++ KA EIF +
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPA 466
K LD +N +I G D A+++ + +GV Y +I +KG +
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 467 DAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKIL 526
+A+ M EDGH+P + ++ + DG + ++++ + G + + ++
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Query: 527 EAL 529
+ L
Sbjct: 621 DML 623
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 210/461 (45%), Gaps = 13/461 (2%)
Query: 119 QLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLE 178
+LG E + ++ L + GR A ++M+ G +P T N ++ G LS K
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 179 TAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI 238
A+ + M G + VTY ++N + + A +L +M+E+NI+ + Y+ +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 239 KGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIP 298
G D+A +F+EM+ + N +TY L+ G C+AG+ + K+LR+M++R I
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 299 PKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIK 358
P + F L+ K G L A ++ K MI I + Y LI+ FCK D+A +
Sbjct: 331 P-NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 359 LLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAF 417
++D +V K D ++N +I C + FR++ +GV+ D V +
Sbjct: 390 MVDLMVSK--------GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
N LI+G + G + A E+ + M R VP + Y L++ GE A + + +
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
++ ++ + +V A + S+ KGVK + ++ L +G + E
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
A M + G P+ ++ L+ G +VKL++
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 225/503 (44%), Gaps = 17/503 (3%)
Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
F M+ PT ++ + + + + + + M+ +GI+ ++ T + MIN + R
Sbjct: 76 FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 135
Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
+K+ A ++ + EP I+++T+I G R +AL + D M KP+ +T
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195
Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV-FMKLLGVQCKSGHLNAAADVLKA 327
L+ GLC +GK E ++ +MVE P N+V + +L V CKSG A ++L+
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQP--NAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 328 MIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI 387
M +I +A Y I+I+ CK D A L +++ K I +YN +I
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT--------TNIITYNILI 305
Query: 388 QHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGV 445
C+ G+ R ++K+ + +P V F+ LI KEG A E+ K M RG+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKI-NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 446 PRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASR 505
D Y LI+ + ++ A +D M+ G P F ++ + R+
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 506 VMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLS 562
+ + M +GV + +++ G + A M+ PN + LL L
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 563 EKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWK 622
+ G++ A+++ + +D+ Y ++ + A K +A+ + + KG K
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 623 SSDKLIAGLNQEGNTKQADILSR 645
+ + +I GL ++G +A++L R
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFR 567
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 194/435 (44%), Gaps = 15/435 (3%)
Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
K D+A LF +M PTVI ++ + ++ D L + +M+ + N T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
++ C K+ + ++++ P + F L+ C G ++ A +++ M+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEP-NTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
+ + L+ C + A+ L+DK+VE +P A +Y P++ +
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC--QPN------AVTYGPVLNVM 238
Query: 391 CHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
C +GQT A R++ ++ + LD V ++ +I G K G+ D+AF + M +G+ +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
Y LI + G D L MI+ +P F +++S ++G+++ A + K
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
M+ +G+ + +++ H+++A +DLM+ G PN F+ L++ + +
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
++L R + D +Y ++ GK LN LF+ M V + K
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-LNVAKELFQEMVSRKVPPNIVTYK 477
Query: 627 -LIAGLNQEGNTKQA 640
L+ GL G +++A
Sbjct: 478 ILLDGLCDNGESEKA 492
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 35/260 (13%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D T+ +I+ + L+ A ++ M KG + F +LI Y K + + +++F
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
M GV +Y+ L + G+ +AK F +M+S + P TY ++L G +
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 175 LKLETAIRFFEDMKSRGISLD-----------------------------------VVTY 199
+ E A+ FE ++ + LD V TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 200 NTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKS 259
N MI G + + EAE LF +M+E P +Y +I+ ++ A ++++ +E+K
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Query: 260 FDVKPNAVTYTALLPGLCDA 279
+A T ++ L D
Sbjct: 607 CGFSVDASTIKMVIDMLSDG 626
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 217/484 (44%), Gaps = 15/484 (3%)
Query: 68 RVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVK 127
R G+L L +M G D LI + + G +++ KI +I++ G V
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 128 SYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDM 187
+Y+ + + G A ++M + P TYN +L S KL+ A+ + M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 188 KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERA 247
R DV+TY +I R + A KL EM+++ P V++Y ++ G R
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 248 DDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK 307
D+A++ ++M S +PN +T+ +L +C G+ ++ +K+L +M+ + P F
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV-VTFNI 349
Query: 308 LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKE 367
L+ C+ G L A D+L+ M + + Y L+ FCK + DRAI+ L+++V +
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 368 IILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV--AFNNLIRGHS 425
P + +YN M+ LC +G+ A QL KG PV +N +I G +
Sbjct: 410 CY--P------DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC-SPVLITYNTVIDGLA 460
Query: 426 KEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASS 485
K G A +++ M + + D Y L+ R+G+ +A G P +
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 486 LFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLM 545
F S+M L + + A + M+ +G K N ++E L G +EAL ++ +
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Query: 546 MQSG 549
G
Sbjct: 581 CNKG 584
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 226/507 (44%), Gaps = 42/507 (8%)
Query: 155 EGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDE 214
E +E H ++ G +LE +F E+M G D++ T+I G+ R K +
Sbjct: 101 EDVESNNHLRQMVRTG-----ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRK 155
Query: 215 AEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLP 274
A K+ ++ P VI+Y MI GY ++AL + D M V P+ VTY +L
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILR 212
Query: 275 GLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIP 334
LCD+GK+ + +VL M++R P D + L+ C+ + A +L M
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYP-DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKL---------VEKEIILRPQST----LDME-- 379
+ Y +L+ CK D AIK L+ + + IILR + +D E
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 380 ------------ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSK 426
++N +I LC G G+A ++ + G + +++N L+ G K
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
E D A E ++ M RG D Y ++ + + G+ DA L+ + G SP
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
+ +V++ L + G+ A +++ M K +K + + ++ L G V+EA+
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
+ G PN F+S++ L + +T A+ L F + R C + SY +++ L G
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAG 630
A +L ++ KG + KSS + +AG
Sbjct: 572 EALELLNELCNKGLMK--KSSAEQVAG 596
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 163/332 (49%), Gaps = 2/332 (0%)
Query: 38 HALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVL 97
HA++ + G D T+ ++ + + G+L+ A L DMP G Q + ++
Sbjct: 257 HAMKLLDEMRDRGC-TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 98 IESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGI 157
+ S G ++ K+ M + G SV +++ L + R+G A KM G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 158 EPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEK 217
+P +YN +L GF K++ AI + E M SRG D+VTYNTM+ + K+++A +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 218 LFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLC 277
+ ++ K P +I+Y T+I G + A+++ DEM++ D+KP+ +TY++L+ GL
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 278 DAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEA 337
GK+ E K E I P + +LG+ CKS + A D L MI
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL-CKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 338 GHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
Y ILIE M A++LL++L K ++
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 188/432 (43%), Gaps = 45/432 (10%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D T+ ++ L GKL A +L M ++ D + +LIE+ + V ++K+
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
D M+ G V +Y+ L I + GR A ++ N M S G +P T+N++L +
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
+ A + DM +G S VVT+N +IN R + A + +M + +P +SY
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
++ G+ ++ D A+ + M S P+ VTY +L LC GK+ + ++L ++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
+ P V + Y +I+ KA
Sbjct: 443 KGCSP----VLIT--------------------------------YNTVIDGLAKAGKTG 466
Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-D 413
+AIKLLD++ K+ L+P + +Y+ ++ L G+ +A FF + + G+ +
Sbjct: 467 KAIKLLDEMRAKD--LKPDTI------TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
V FN+++ G K D A + + M RG + +Y LIE +G +A L+
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Query: 474 SMIEDGHSPASS 485
+ G SS
Sbjct: 579 ELCNKGLMKKSS 590
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 194/452 (42%), Gaps = 51/452 (11%)
Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
+L+ V N + R +++E K M P +I TT+I+G+ + + A +
Sbjct: 99 ALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAK 158
Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
I + ++ P+ +TY ++ G C
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYC----------------------------------- 183
Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
K+G +N A VL R+S+ + Y ++ + C + +A+++LD++++++ P
Sbjct: 184 -KAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY--P 237
Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPD 431
+ +Y +I+ C + G A ++ +G D V +N L+ G KEG D
Sbjct: 238 ------DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
A + + M G + + ++ S G DA+ L M+ G SP+ F ++
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
L G + A +++ M + G + N +L ++ A+ ++ M+ G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 552 PN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
P+ ++++L+ L + GK AV++L+ + C L +Y V+D L AGKT A +
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
L ++ K D + L+ GL++EG +A
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 145/325 (44%), Gaps = 37/325 (11%)
Query: 15 RALVPQF-DHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
R P +N++ N + + A++F + +G + TH ++ + G+
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWM 326
Query: 74 HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
A +L DM +KG F +LI +KG++ ++ I + M Q G + + SY+ L
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
+ + A Y +M+S G P TYN ML K+E A+ + S+G S
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
++TYNT+I+G + K +A KL EM+ K+++P I+Y++++ G + D+A++
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 254 FDEMKSFDVKPNAVT-----------------------------------YTALLPGLCD 278
F E + ++PNAVT YT L+ GL
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 279 AGKMVEVQKVLREMVERYIPPKDNS 303
G E ++L E+ + + K ++
Sbjct: 567 EGMAKEALELLNELCNKGLMKKSSA 591
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 213/426 (50%), Gaps = 45/426 (10%)
Query: 62 MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
+I+ G++ + +L+++ + G + ++ LI+ KKG ++++ +F M +LG
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
+ + ++Y L + + G + KM +G+ P +TYN ++ + + A
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 182 RFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGY 241
+ F++M+ RG+S ++VTYNT+I G R K++EA K+ +MK I P +I+Y T+I G+
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 242 VAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKD 301
V + AL + ++KS + P+ VTY L+ G C G K+++EM ER I P
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 302 NSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLD 361
+ Y ILI+ F +++ ++AI+L
Sbjct: 409 VT------------------------------------YTILIDTFARSDNMEKAIQL-- 430
Query: 362 KLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNL 420
+L +E+ L P + +Y+ +I C GQ +A F+ +++K + V +N +
Sbjct: 431 RLSMEELGLVP------DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
I G+ KEG+ A +++K M + + + +Y +IE ++ + +A+ ++ MI+ G
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 481 SPASSL 486
P++S+
Sbjct: 545 DPSTSI 550
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 195/458 (42%), Gaps = 28/458 (6%)
Query: 129 YDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMK 188
Y+ + ++ ++ YFN+M+ G P + +N +L S FF + K
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 189 SRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERAD 248
S+ + LDV ++ +I G +++++ L E+ E P V+ YTT+I G +
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 249 DALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKL 308
A +F EM + N TYT L+ GL G V ++ E Y +++ VF L
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNG-------VKKQGFEMYEKMQEDGVFPNL 268
Query: 309 LGVQC------KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
C K G A V M + Y LI C+ + A K++D+
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
+ ++ +YN +I C G+ GKA R L +G L P V +N L
Sbjct: 329 M--------KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG-LSPSLVTYNIL 379
Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
+ G ++G+ A ++VK M RG+ Y LI+++ R A SM E G
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
P + ++ G++ ASR+ KSMVEK + N + ++ G AL
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499
Query: 541 RIDLMMQSGSVPNFDS---LLSVLSEKGKTIAAVKLLD 575
+ M + PN S ++ VL ++ K+ A +L++
Sbjct: 500 LLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 212/471 (45%), Gaps = 12/471 (2%)
Query: 93 MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
++EV+I SY + + S+ F+ M G ++ L ++ + +FN+
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
S+ + +++ +++ G + ++E + ++ G S +VV Y T+I+G + ++
Sbjct: 156 KSKVVLDV-YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
++A+ LF EM + + +YT +I G ++++M+ V PN TY +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
+ LC G+ + +V EM ER + + + L+G C+ LN A V+ M
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSC-NIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
I Y LI+ FC +A+ L L K L P +YN ++ C
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDL--KSRGLSPSLV------TYNILVSGFCR 385
Query: 393 NGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADA 451
G T A +++ ++G+ V + LI ++ N + A ++ M G+ D
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 452 YICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV 511
Y LI + KG+ +A SM+E P ++ +++ ++G A +++K M
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 512 EKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS 562
EK + N+ ++E L +EA ++ M+ SG P+ S+LS++S
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS-TSILSLIS 555
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 143/279 (51%), Gaps = 1/279 (0%)
Query: 21 FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
+ +N V N L ++ A Q F + G+ + + T+ +I L R KLN A ++
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGV-SCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 81 DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
M G+ + + LI+ + G + +++ + +K G+ S+ +Y+ L R+G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
A + +M GI+P++ TY +++ F S +E AI+ M+ G+ DV TY+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
+I+G+ +M+EA +LF M EKN EP + Y TMI GY + AL++ EM+
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
++ PN +Y ++ LC K E ++++ +M++ I P
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 202/454 (44%), Gaps = 15/454 (3%)
Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
Y +IN Y + + ++ + F EM + P + ++ V + F+E K
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
S V + ++ L+ G C+AG++ + +L E+ E P + ++ L+ CK G +
Sbjct: 157 S-KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSP-NVVIYTTLIDGCCKKGEI 214
Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
A D+ M +L + Y +LI K + + ++ +K+ E + P
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF--PN----- 267
Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
+YN ++ LC +G+T A F ++ ++GV + V +N LI G +E + A ++V
Sbjct: 268 -LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFED 497
M G+ + Y LI+ + G+ A + + G SP+ + ++
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 498 GRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---F 554
G A++++K M E+G+K + +++ ++E+A+ M + G VP+ +
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 555 DSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIME 614
L+ KG+ A +L + ++C + Y ++ G + A +L ++ E
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 615 KGGVTDWKSSDKLIAGLNQEGNTKQAD-ILSRMI 647
K + S +I L +E +K+A+ ++ +MI
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%)
Query: 53 NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
N + T+ +I+ VGKL A + D+ +G+ + +L+ + +KG + K
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
+ M++ G++ S +Y L R A + M G+ P HTY+V++ GF
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
+ ++ A R F+ M + + V YNTMI GY + A KL EM+EK + P V
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514
Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
SY MI+ ++ +A R+ ++M + P+
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 144/323 (44%), Gaps = 14/323 (4%)
Query: 340 YGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKA 399
Y ++I ++ +++ + +I +++V+ + P S + +N ++ + + +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFV--PGS------NCFNYLLTFVVGSSSFNQW 148
Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
FF + K VLD +F LI+G + G + +F+++ + G + Y LI+
Sbjct: 149 WSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC 208
Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
+KGE AK M + G + ++ LF++G + + + M E GV NL
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSG---SVPNFDSLLSVLSEKGKTIAAVKLLDF 576
++ L G ++A D M + G ++ +++L+ L + K A K++D
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
+L +Y ++D GK A S+ + +G + + L++G ++G+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 637 TKQADILSRMIRGEMSRGSQKEK 659
T A ++M++ RG + K
Sbjct: 389 TSGA---AKMVKEMEERGIKPSK 408
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/615 (22%), Positives = 253/615 (41%), Gaps = 49/615 (7%)
Query: 6 WTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
W +N + AL + V VL K+ A+++FRW ER H E++ ++ +
Sbjct: 48 WGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLV 107
Query: 66 LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
+ R + IL +M G + ++ K ++E + +M++ +
Sbjct: 108 MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
+Y L M F +M G EPT H + ++ GF ++++A+ +
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
+MKS + D+V YN I+ + + K+D A K F E++ ++P ++YT+MI
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVL-REMVERYIPPKDNSV 304
R D+A+ +F+ ++ P Y ++ G AGK E +L R+ + IP SV
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP----SV 343
Query: 305 FMKLLGVQC--KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
+ C K G ++ A V + M + + P Y ILI+ C+A D A +L D
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKKDAAPN-LSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL-MKKGVLDPVAFNNLI 421
+ ++ L + N M+ LC + + +A F ++ K D + F +LI
Sbjct: 403 M--------QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 422 RGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHS 481
G K G D A+++ + M ++ Y LI+++ G D MI S
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 482 PASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGR 541
P L + M+ +F+ G + + + + + + + ++ L+ G E
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY-- 572
Query: 542 IDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
L + E+G C++D +Y V+D GK
Sbjct: 573 --------------ELFYSMKEQG----------------CVLDTRAYNIVIDGFCKCGK 602
Query: 602 TLNAYSILFKIMEKG 616
AY +L ++ KG
Sbjct: 603 VNKAYQLLEEMKTKG 617
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 149/617 (24%), Positives = 279/617 (45%), Gaps = 44/617 (7%)
Query: 65 ILGRVGKLNHARCILL---DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLG 121
++G +NH+ +L M + G + +F LI + K+G V ++ + D MK
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 122 VERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAI 181
++ + Y+ + G+ MA ++F+++ + G++P TY M+ + +L+ A+
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293
Query: 182 RFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
FE + K+R + YNTMI GY K DEA L + K P+VI+Y ++
Sbjct: 294 EMFEHLEKNRRVPC-TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
+ + D+AL++F+EMK D PN TY L+ LC AGK+ ++ M + + P
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411
Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAM-IRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
+V + ++ CKS L+ A + + M ++ P E + LI+ K D A K+
Sbjct: 412 VRTVNI-MVDRLCKSQKLDEACAMFEEMDYKVCTPDEI-TFCSLIDGLGKVGRVDDAYKV 469
Query: 360 LDKLVEKEIILRPQSTL----------------------DMEASSYNPMIQHL-----C- 391
+K+++ + R S + DM + +P +Q L C
Sbjct: 470 YEKMLDSDC--RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527
Query: 392 -HNGQTGKAEIFFRQL-MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
G+ K F ++ ++ V D +++ LI G K G + +E+ M +G D
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
AY +I+ + + G+ A L+ M G P + SV++ L + R+ A + +
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK 566
K ++ N+ + + +++ G ++EA ++ +MQ G PN ++SLL L + +
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 567 TIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDK 626
A+ C + +Y +++ L K A+ ++ ++G S
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 627 LIAGLNQEGNTKQADIL 643
+I+GL + GN +A L
Sbjct: 768 MISGLAKAGNIAEAGAL 784
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 211/472 (44%), Gaps = 46/472 (9%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+N++ ++L A + A + +++AGLF + R ++ M++ L + KL+ A + +M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI-MVDRLCKSQKLDEACAMFEEM 438
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
K DE F LI+ GK G V ++ K+++ M + Y +L K GR
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498
Query: 143 MMAKRYFNKMLSEGIEPTRH-----------------------------------TYNVM 167
+ + M+++ P +Y+++
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 168 LWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNI 227
+ G + F MK +G LD YN +I+G+ + K+++A +L EMK K
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 228 EPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
EPTV++Y ++I G ++R D+A +F+E KS ++ N V Y++L+ G G++ E
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 288 VLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENF 347
+L E++++ + P + + LL K+ +N A ++M L YGILI
Sbjct: 679 ILEELMQKGLTP-NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 348 CKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL- 406
CK +++A ++ ++ ++P + SY MI L G +A F +
Sbjct: 738 CKVRKFNKAFVFWQEMQKQG--MKPSTI------SYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 407 MKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIES 458
GV D +N +I G S AF + + RRG+P + L+++
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDT 841
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/591 (21%), Positives = 258/591 (43%), Gaps = 48/591 (8%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+N+ + + A +FF +E GL D T+ MI +L + +L+ A + +
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
K + +I YG G E+ + + + G SV +Y+ + + + G+
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
A + F +M + P TYN+++ + KL+TA + M+ G+ +V T N M
Sbjct: 360 DEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
++ + +K+DEA +F EM K P I++ ++I G V R DDA +++++M D
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP----------------------- 299
+ N++ YT+L+ + G+ + K+ ++M+ + P
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 300 -----------KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC 348
D + L+ K+G N ++ +M + Y I+I+ FC
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 349 KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK 408
K ++A +LL+++ K + +Y +I L + +A + F +
Sbjct: 599 KCGKVNKAYQLLEEMKTK--------GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 409 KGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
K + L+ V +++LI G K G D A+ I++ + ++G+ + + L+++ ++ E +
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILE 527
A SM E +P + ++ L + + A + M ++G+K + ++
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLD 575
L G++ EA D +G VP+ +++++ LS + + A L +
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/517 (21%), Positives = 219/517 (42%), Gaps = 12/517 (2%)
Query: 127 KSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFED 186
+SY++L ++ R + + +M G P+ +T M+ G + KL +
Sbjct: 99 ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM 158
Query: 187 MKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVER 246
M+ Y T+I ++ D LF +M+E EPTV +TT+I+G+ R
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFM 306
D AL + DEMKS + + V Y + GK+ K E+ + P D +
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP-DEVTYT 277
Query: 307 KLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEK 366
++GV CK+ L+ A ++ + + + Y +I + A +D A LL++ K
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 367 EIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSK 426
I P +YN ++ L G+ +A F ++ K + +N LI +
Sbjct: 338 GSI--PSVI------AYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCR 389
Query: 427 EGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL 486
G D+AFE+ M + G+ + +++ + + +A + M +P
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 487 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMM 546
F S+++ L + GRV A +V + M++ + N + +++ G E+ M+
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 547 QSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTL 603
P+ ++ + + + G+ + + R + D SY ++ L+ AG
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 604 NAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
Y + + + E+G V D ++ + +I G + G +A
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+N+V + A Q ++ G F T+ +I+ L ++ +L+ A + +
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
K ++ + ++ LI+ +GK G + E+ I + + Q G+ ++ ++++L +++
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
A F M P + TY +++ G K A F+++M+ +G+ ++Y TM
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
I+G + + EA LF K P Y MI+G RA DA +F+E + +
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Query: 263 KPNAVTYTALLPGL 276
+ T LL L
Sbjct: 829 PIHNKTCVVLLDTL 842
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Query: 62 MIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL- 120
+I+ G+VG+++ A IL ++ +KG+ + + L+++ K + E++ F MK+L
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 121 ----------------------------------GVERSVKSYDALFKLILRRGRYMMAK 146
G++ S SY + + + G A
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 147 RYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGY 206
F++ + G P YN M+ G + A FE+ + RG+ + T +++
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Query: 207 NRFKKMDEAEKLFAEMKE 224
++ +++A + A ++E
Sbjct: 843 HKNDCLEQAAIVGAVLRE 860
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 203/430 (47%), Gaps = 12/430 (2%)
Query: 24 NLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMP 83
LV+ + K SE R V + D T+ +I L + G+ + A +L M
Sbjct: 175 TLVHGLFQHNKASEAVALVERMVVKGC--QPDLVTYGAVINGLCKRGEPDLALNLLNKME 232
Query: 84 KKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYM 143
K ++ D ++ +I+S K V +++ +F M G+ V +Y +L + GR+
Sbjct: 233 KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 292
Query: 144 MAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
A R + ML I P T+N ++ F KL A + F++M R I ++VTYN++I
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
NG+ ++DEA+++F M K+ P V++Y T+I G+ ++ D + +F +M +
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
N VTYT L+ G A Q V ++MV + P + + LL CK+G L A
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP-NIMTYNTLLDGLCKNGKLEKAMV 471
Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
V + + + + + Y I+ E CKA + L L K + +P + +Y
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV--KP------DVIAY 523
Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
N MI C G +A F ++ + G L D +N LIR H ++G+ ++ E++K M
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Query: 443 RGVPRDADAY 452
DA Y
Sbjct: 584 CRFAGDASTY 593
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 214/486 (44%), Gaps = 29/486 (5%)
Query: 53 NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
+H+ T+ MI L R +L+ A IL M K G L+ + + E+V
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
+ D M ++G + ++ L + + + A +M+ +G +P TY ++ G
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
+ + A+ M+ I DVV Y+T+I+ +++ +D+A LF EM K I P V
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
+Y+++I R DA R+ +M + PN VT+ +L+ GK++E +K+ EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
++R I P + + L+ C L+ A + M+ + Y LI FCKA+
Sbjct: 337 IQRSIDP-NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDM-----EAS----------------------SYNP 385
++L + + ++ + + +AS +YN
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 386 MIQHLCHNGQTGKAEIFFRQLMK-KGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
++ LC NG+ KA + F L K K D +N + G K G + +++ + +G
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
V D AY +I + +KG +A T M EDG P S + +++ + DG ++
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 575
Query: 505 RVMKSM 510
++K M
Sbjct: 576 ELIKEM 581
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 131/572 (22%), Positives = 245/572 (42%), Gaps = 58/572 (10%)
Query: 92 DMFEVLIESYGKKGIVQES--------VKIFDI-------MKQLGVERSVKSYDALFKLI 136
D+F +++S IV+ S +K FD+ M+ LGV ++ +Y+ + +
Sbjct: 51 DLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCL 110
Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
RR + A KM+ G P+ T N +L GF ++ A+ + M G D
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
VT+ T+++G + K EA L M K +P +++Y +I G D AL + ++
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
M+ ++ + V Y+ ++ LC + + + EM + I P D + L+ C G
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP-DVFTYSSLISCLCNYG 289
Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
+ A+ +L M+ I + LI+ F K A KL D+++++ I
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI-------- 341
Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFE 435
D +YN +I C + + +A+ F ++ K L D V +N LI G K E
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
+ + M RRG+ + Y LI + + + +A+ M+ DG P + ++++ L
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
++G+++ A V + + + ++ ++ + E + G VE+
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW---------------- 505
Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
L LS KG VK D+ +Y ++ G AY++ K+ E
Sbjct: 506 DLFCSLSLKG-----VK-----------PDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 616 GGVTDWKSSDKLIAGLNQEGN-TKQADILSRM 646
G + D + + LI ++G+ A+++ M
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 109/513 (21%), Positives = 207/513 (40%), Gaps = 52/513 (10%)
Query: 172 FLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
L LKL+ A+ F +M KSR +V ++ +++ + KK D +M+ +
Sbjct: 41 LLHLKLDEAVDLFGEMVKSRPFP-SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHN 99
Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
+ +Y MI + AL I +M P+ VT +LL G C ++ E ++
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 291 EMVERYIPPKDNSVFMKLL----------------------GVQ-------------CKS 315
+MVE P D F L+ G Q CK
Sbjct: 160 QMVEMGYQP-DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 316 GHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQST 375
G + A ++L M + I + Y +I++ CK D A+ L ++ K I RP
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI--RP--- 273
Query: 376 LDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSA 433
+ +Y+ +I LC+ G+ A ++++ + +P V FN+LI +KEG A
Sbjct: 274 ---DVFTYSSLISCLCNYGRWSDASRLLSDMLERKI-NPNVVTFNSLIDAFAKEGKLIEA 329
Query: 434 FEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
++ M +R + + Y LI + +A+ M+ P + +++
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
+ +V + + M +G+ N ++ + A M+ G PN
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
+++LL L + GK A+ + ++ D+ +Y + + + AGK + + +
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
+ KG D + + +I+G ++G ++A L
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 25 LVYNVLHG--AKNS--EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
+ YN L KN E A+ F +++++ + D T+ M E + + GK+ +
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM-EPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 81 DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
+ KGV+ D + +I + KKG+ +E+ +F MK+ G +Y+ L + LR G
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVM 167
+ +M S TY ++
Sbjct: 570 DKAASAELIKEMRSCRFAGDASTYGLV 596
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 225/501 (44%), Gaps = 32/501 (6%)
Query: 13 KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
K R L F+ N + + + K + + ++R G+ +H+ T+ +I R ++
Sbjct: 78 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI-SHNLYTYNILINCFCRRSQI 136
Query: 73 NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
+ A +L M K G + L+ Y + ++V + D M ++G ++ L
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
+ + A ++M+ G +P TY V++ G ++ A M++ I
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
+VV Y+T+I+ +++ D+A LF EM+ K + P VI+Y+++I ER DA R
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
+ +M + PN VT+ AL+ GK+VE +K+ EM++R I P D + L+
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP-DIFTYSSLINGF 375
Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII--L 370
C L+ A + + MI Y LI FCKA+ D ++L ++ ++ ++
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 371 RPQSTL--------DMEAS-----------------SYNPMIQHLCHNGQTGKAEIFFRQ 405
+TL D + + +YN ++ LC NG+ KA + F +
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-E 494
Query: 406 LMKKGVLDPV--AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKG 463
+++ ++P +N +I G K G + +++ + +GV D Y +I + RKG
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Query: 464 EPADAKTALDSMIEDGHSPAS 484
+A M EDG P S
Sbjct: 555 LKEEADALFRKMREDGPLPDS 575
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 236/534 (44%), Gaps = 19/534 (3%)
Query: 124 RSVKSYDALFKLILRRGRYMM----AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
R+ S ++ ILR G + M A F M+ P+ +N +L K +
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
I E M+ GIS ++ TYN +IN + R ++ A L +M + EP++++ ++++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
GY +R DA+ + D+M +P+ +T+T L+ GL K E ++ MV+R P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
+ + + G+ CK G ++ A ++L M I Y +I++ CK D A+ L
Sbjct: 224 NLVTYGVVVNGL-CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAF 417
++ K + RP +Y+ +I LC+ + A ++++ + +P V F
Sbjct: 283 FTEMENKGV--RPNVI------TYSSLISCLCNYERWSDASRLLSDMIERKI-NPNVVTF 333
Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
N LI KEG A ++ M +R + D Y LI + +AK + MI
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 478 DGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEE 537
P + +++ + R+ + + M ++G+ N ++ +
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 538 ALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLD 594
A M+ G PN +++LL L + GK A+ + ++ + +Y +++
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 595 ALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
+ AGK + + + + KG D + +I+G ++G ++AD L R +R
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%)
Query: 94 FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
+ LI + K + E V++F M Q G+ + +Y L + A+ F +M+
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
S+G+ P TYN +L G + KLE A+ FE ++ + + TYN MI G + K++
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
+ LF + K ++P VI Y TMI G+ ++A +F +M+ P++ T
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 29 VLHG---AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKK 85
++HG A++ ++A F+ + G+ + + T+ +++ L + GKL A + + +
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGV-HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 86 GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
++ + ++IE K G V++ +F + GV+ V Y+ + R+G A
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 146 KRYFNKMLSEGIEPTRHT 163
F KM +G P T
Sbjct: 560 DALFRKMREDGPLPDSGT 577
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/584 (22%), Positives = 244/584 (41%), Gaps = 79/584 (13%)
Query: 31 HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
H K+ + A+ FF ++ R+ F + + K+I + R+ + + A + M + + +
Sbjct: 82 HYFKSLDDAIDFFDYMVRSRPFYTAVDCN-KVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140
Query: 91 EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD----------------ALFK 134
F +LI+ + + S+ F + +LG + V +++ ALF
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
++ G ++ A F++M+ G+ P T+N ++ G L ++ A M +G+ +
Sbjct: 201 YMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
DVVTY T++NG + A L ++M+E +I+P V+ Y+ +I DA +F
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
EM + PN TY ++ G C G+ + Q++LR+M+ER I P D F L+ K
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP-DVLTFNALISASVK 378
Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII----- 369
G L A + M+ I + Y +I FCK +D A + D + +++
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 370 ----------------LRPQS--TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV 411
LR S L ++YN +I C A+ F++++ GV
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 412 ------------------------------------LDPVAFNNLIRGHSKEGNPDSAFE 435
LD VA+N +I G K D A++
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
+ + GV D Y +I + K +DA M ++GH P +S + +++
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEAL 539
+ G + + ++ M G + K++ L+ G ++++
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDA-FTIKMVADLITDGRLDKSF 661
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 208/441 (47%), Gaps = 15/441 (3%)
Query: 70 GKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSY 129
G++ A ++ M KG+ D + ++ K G + ++ + M++ ++ V Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 130 DALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKS 189
A+ + + G + A+ F++ML +GI P TYN M+ GF + A R DM
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 190 RGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADD 249
R I+ DV+T+N +I+ + K+ EAEKL EM + I P ++Y +MI G+ R DD
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 250 ALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLL 309
A +FD M S P+ VT+ ++ C A ++ E ++LRE+ R + + + + L+
Sbjct: 420 AKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA-NTTTYNTLI 474
Query: 310 GVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEII 369
C+ +LNAA D+ + MI + + IL+ FC+ E + A++L E+I
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF------EVI 528
Query: 370 LRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEG 428
S +D++ +YN +I +C + +A F L GV D +N +I G +
Sbjct: 529 --QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 429 NPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
A + M G D Y LI L+ GE + + M +G S + +
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Query: 489 SVMESLFEDGRVQTASRVMKS 509
V + L DGR+ + M S
Sbjct: 647 MVAD-LITDGRLDKSFSDMLS 666
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 186/449 (41%), Gaps = 38/449 (8%)
Query: 204 NGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVK 263
+G + FK +D+A F M T + +I +V + R D A+ ++ +M+ +
Sbjct: 79 SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138
Query: 264 PNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAAD 323
N ++ L+ CD K+ ++ + P D F LL C ++ A
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQP-DVVTFNTLLHGLCLEDRISEALA 197
Query: 324 VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
+ M+ E G + A+ L D++V EI L P ++
Sbjct: 198 LFGYMV------ETG--------------FLEAVALFDQMV--EIGLTPV------VITF 229
Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
N +I LC G+ +A +++ KG+ +D V + ++ G K G+ SA ++ M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQT 502
+ D Y +I+ + G +DA+ M+E G +P + +++ GR
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 503 ASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLS 559
A R+++ M+E+ + ++ ++ A + G + EA D M+ P+ ++S++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 560 VLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVT 619
+ + A + D D+ ++ ++D A + +L +I +G V
Sbjct: 410 GFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 620 DWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
+ + + LI G + N A D+ MI
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 212/440 (48%), Gaps = 16/440 (3%)
Query: 79 LLD-MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLIL 137
LLD M + G+ D +F +LI +Y K+G V +++ +F M+Q G+ + +Y A+ ++
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417
Query: 138 RRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVV 197
+ GR A YF +M+ EG+ P YN ++ G K E A +M RGI L+ +
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477
Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
+N++I+ + + ++ E+EKLF M ++P VI+Y T+I GY + D+A+++ M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGH 317
S +KPN VTY+ L+ G C +M + + +EM + P + + L G+ ++
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF-QTRR 596
Query: 318 LNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
AA ++ + E Y I++ CK ++ D A+++ L + L
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD--------LK 648
Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEI 436
+EA ++N MI L G+ +A+ F G++ + + + +G + ++
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Query: 437 VKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFE 496
M G D+ ++ L++GE A T L SMI++ H + S+ L
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLS 767
Query: 497 DGRVQTASRVM----KSMVE 512
G+ Q R + KS +E
Sbjct: 768 GGKYQEYYRFLPEKYKSFIE 787
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 142/569 (24%), Positives = 265/569 (46%), Gaps = 21/569 (3%)
Query: 39 ALQFFRWVERAGL--FNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
A+ + + RAG D T+ +I R G+L+ L ++ KKG + D F
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 97 LIESYGKKGIVQESVKI-FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSE 155
L++ +++ I M +LG +V SY+ L K + R A + M +
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 156 ---GIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKM 212
G P +Y ++ GFF + A + +M RGI DVVTYN++I + + M
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 213 DEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTAL 272
D+A ++ M + + P ++Y +++ GY + + +A+ +M+S V+P+ VTY+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
+ LC G+ +E +K+ M +R + P+ + L G K G L +L M+R
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK-GALVEMHGLLDLMVRNG 366
Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
I + + ILI + K D+A+ + K+ Q L+ A +Y +I LC
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKM--------RQQGLNPNAVTYGAVIGILCK 418
Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
+G+ A ++F Q++ +G L P + +N+LI G + A E++ M RG+ +
Sbjct: 419 SGRVEDAMLYFEQMIDEG-LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477
Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
+ +I+S+ ++G +++ + M+ G P + +++ G++ A +++ M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 511 VEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKT 567
V G+K N + ++ +E+AL M SG P+ ++ +L L + +T
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597
Query: 568 IAAVKLLDFCLGRDCIIDLASYEKVLDAL 596
AA +L I+L++Y +L L
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGL 626
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 236/515 (45%), Gaps = 35/515 (6%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D T+ +I L + ++ A +L M K GV D + ++ Y G +E++
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
M+ GVE V +Y L + + GR M A++ F+ M G++P TY +L G+
Sbjct: 290 KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK 349
Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
L + M GI D ++ +I Y + K+D+A +F++M+++ + P ++Y
Sbjct: 350 GALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTY 409
Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
+I R +DA+ F++M + P + Y +L+ GLC K ++++ EM++
Sbjct: 410 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 469
Query: 295 RYIPPKDNSVFMK-LLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
R I N++F ++ CK G + + + + M+R+ + Y LI +C A
Sbjct: 470 RGICL--NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 354 DRAIKLLDKLVEKEIILRPQ----STL------------------DMEAS-------SYN 384
D A+KLL +V + L+P STL +ME+S +YN
Sbjct: 528 DEAMKLLSGMV--SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 385 PMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRR 443
++Q L +T A+ + ++ + G ++ +N ++ G K D A ++ + +
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645
Query: 444 GVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTA 503
+ +A + +I++ L+ G +AK + +G P +R + E++ G ++
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 705
Query: 504 SRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEA 538
++ SM + G + ++ I+ LL RG + A
Sbjct: 706 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 226/494 (45%), Gaps = 15/494 (3%)
Query: 25 LVYN-VLHGAKNS---EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILL 80
+ YN +LHG +S + A+ F + + G+ D T+ +++ L + G+ AR I
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGV-EPDVVTYSLLMDYLCKNGRCMEARKIFD 325
Query: 81 DMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRG 140
M K+G++ + + L++ Y KG + E + D+M + G+ + L ++G
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQG 385
Query: 141 RYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYN 200
+ A F+KM +G+ P TY ++ S ++E A+ +FE M G+S + YN
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445
Query: 201 TMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSF 260
++I+G K + AE+L EM ++ I I + ++I + R ++ ++F+ M
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
VKPN +TY L+ G C AGKM E K+L MV + P + + L+ CK +
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP-NTVTYSTLINGYCKISRMED 564
Query: 321 AADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEA 380
A + K M + + Y I+++ + A +L ++ E S +E
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE--------SGTQIEL 616
Query: 381 SSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKI 439
S+YN ++ LC N T A F+ L + L+ FN +I K G D A ++
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 440 MGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGR 499
G+ + Y + E+ + +G + SM ++G + S + ++ L + G
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 500 VQTASRVMKSMVEK 513
+ A + + EK
Sbjct: 737 ITRAGTYLSMIDEK 750
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 209/465 (44%), Gaps = 18/465 (3%)
Query: 192 ISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDAL 251
++ D+ TY +I R ++D + +K I++T ++KG A +R DA+
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 252 RI-FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY--IPPKDNSVFMKL 308
I M PN +Y LL GLCD + E ++L M + P D + +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 309 LGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEI 368
+ K G + A M+ I + Y +I CKA+ D+A+++L+ +V+ +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 369 ILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKE 427
+ P + +YN ++ C +GQ +A F +++ GV D V ++ L+ K
Sbjct: 263 M--P------DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314
Query: 428 GNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLF 487
G A +I M +RG+ + Y L++ Y KG + LD M+ +G P +F
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Query: 488 RSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQ 547
++ + + G+V A V M ++G+ N ++ L G VE+A+ + M+
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 548 SGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLN 604
G P ++SL+ L K A +L+ L R ++ + ++D+ G+ +
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494
Query: 605 AYSILFKIMEKGGV-TDWKSSDKLIAGLNQEGNTKQA-DILSRMI 647
+ LF++M + GV + + + LI G G +A +LS M+
Sbjct: 495 SEK-LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 175/396 (44%), Gaps = 13/396 (3%)
Query: 261 DVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNA 320
+V P+ TY L+ C AG++ L ++++ D F LL C +
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSD 140
Query: 321 AAD-VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDME 379
A D VL+ M L Y IL++ C A++LL + + P +
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVV--- 197
Query: 380 ASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVK 438
SY +I G + KA + +++ +G+L D V +N++I K D A E++
Sbjct: 198 --SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255
Query: 439 IMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDG 498
M + GV D Y ++ Y G+P +A L M DG P + +M+ L ++G
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315
Query: 499 RVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FD 555
R A ++ SM ++G+K + +L+ +G + E G +DLM+++G P+ F
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375
Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
L+ +++GK A+ + + + +Y V+ L +G+ +A +++++
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 616 GGVTDWKSSDKLIAGLNQEGNTKQAD--ILSRMIRG 649
G + LI GL ++A+ IL + RG
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
>sp|Q9SAD9|PPR40_ARATH Pentatricopeptide repeat-containing protein At1g13040,
mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2
SV=1
Length = 517
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/527 (23%), Positives = 234/527 (44%), Gaps = 41/527 (7%)
Query: 103 KKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRH 162
K G++ +V++FD M+ Y+ +++R R+ +A+ + M G
Sbjct: 21 KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPF 80
Query: 163 TYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEM 222
TY+ + G K + DM++ G D+ +N ++ R K+ A + F M
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 223 KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKM 282
++ EP V+SYT +I G + DA+ I++ M V P+ AL+ GLC A K+
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 283 VEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGI 342
+++ E ++ V+ L+ CK+G + A + M ++ + Y +
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 343 LIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIF 402
L+ + M RA ++ ++V +S + ++A SYN +++ C K F
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMV--------RSGIQLDAYSYNQLLKRHCRVSHPDKCYNF 312
Query: 403 F-RQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLR 461
+++ +G D V+++ LI + N A+ + + M ++G+ + Y LI+++LR
Sbjct: 313 MVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372
Query: 462 KGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDL 521
+G + AK LD M E G SP + ++++ L + G V A V M+E + +
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPD--- 429
Query: 522 VAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRD 581
+++SL+S L G+ A+KL + G++
Sbjct: 430 -----------------------------AISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 582 CIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLI 628
C D +++ ++ L+ K AY + ++M+KG D SD LI
Sbjct: 461 CCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 202/509 (39%), Gaps = 80/509 (15%)
Query: 145 AKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMIN 204
A + F++M YN + + E A + DMK G SL TY+ I+
Sbjct: 28 AVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFIS 87
Query: 205 GYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKP 264
G + KK D + L ++M+ P + ++ + + A++ F M +P
Sbjct: 88 GLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREP 147
Query: 265 NAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADV 324
+ V+YT L+ GL AGK+ + ++ M+ + P DN L+ C + ++ A ++
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSP-DNKACAALVVGLCHARKVDLAYEM 206
Query: 325 LKAMIRLS-IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSY 383
+ I+ + + Y LI FCKA ++A L K +I P + +Y
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL--KSYMSKIGCEP------DLVTY 258
Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE-IVKIMG 441
N ++ + N +AE ++++ G+ LD ++N L++ H + +PD + +VK M
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEME 318
Query: 442 RRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQ 501
RG D +Y LIE++ R +
Sbjct: 319 PRGFC-DVVSYSTLIETFCRASN-----------------------------------TR 342
Query: 502 TASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVL 561
A R+ + M +KG+ N+ +++A L G+ A +D M + G P
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP--------- 393
Query: 562 SEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDW 621
D Y +LD L +G AY + ++E D
Sbjct: 394 -----------------------DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 622 KSSDKLIAGLNQEGNTKQADILSRMIRGE 650
S + LI+GL + G +A L ++G+
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 139/284 (48%), Gaps = 13/284 (4%)
Query: 93 MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKL-----ILRRGRYMMAKR 147
++ LI + K G ++++ + M ++G E + +Y+ L +L+R +MA+
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE- 280
Query: 148 YFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF-EDMKSRGISLDVVTYNTMINGY 206
M+ GI+ ++YN +L + F ++M+ RG DVV+Y+T+I +
Sbjct: 281 ----MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETF 335
Query: 207 NRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNA 266
R +A +LF EM++K + V++YT++IK ++ + A ++ D+M + P+
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 267 VTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLK 326
+ YT +L LC +G + + V +M+E I P D + L+ C+SG + A + +
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP-DAISYNSLISGLCRSGRVTEAIKLFE 454
Query: 327 AMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIIL 370
M + + +I + + A K+ D++++K L
Sbjct: 455 DMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL 498
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D ++ +IE R A + +M +KG+ + + LI+++ ++G + K+
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
D M +LG+ Y + + + G A FN M+ I P +YN ++ G S
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK 225
++ AI+ FEDMK + D +T+ +I G R KK+ A K++ +M +K
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDK 494
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 33 AKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDED 92
A N+ A + F + + G+ + T+ +I+ R G + A+ +L M + G+ D
Sbjct: 338 ASNTRKAYRLFEEMRQKGMV-MNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 93 MFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKM 152
+ +++ K G V ++ +F+ M + + SY++L + R GR A + F M
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 153 LSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMI 203
+ P T+ ++ G KL A + ++ M +G +LD +T+I
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 203/430 (47%), Gaps = 10/430 (2%)
Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
S+ + L +I + RY + F +M GI P T N+++ LS + A F
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141
Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
M G D+VT+ +++NGY + ++++A LF ++ +P V++YTT+I+
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
+ A+ +F++M + +PN VTY AL+ GLC+ G+ + +LR+M++R I P +
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP-NVIT 260
Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
F L+ K G L A ++ MI++S+ + YG LI C + D A ++ L+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF-YLM 319
Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRG 423
E+ P + Y +I C + + F ++ +KGV+ + + + LI+G
Sbjct: 320 ERNGCY-PNEVI------YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
+ G PD A E+ M R P D Y L++ G+ A + M +
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRID 543
+ +++ + + G+V+ A + S+ KG+K N+ ++ RG + EA
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 544 LMMQSGSVPN 553
M + G +PN
Sbjct: 493 KMKEDGFLPN 502
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 188/406 (46%), Gaps = 29/406 (7%)
Query: 111 VKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWG 170
+ +F+ M+ LG+ + + + + + + A + KM+ G EP T+ +L G
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162
Query: 171 FFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPT 230
+ ++E AI F+ + G +VVTY T+I + + ++ A +LF +M P
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 231 VISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLR 290
V++Y ++ G + R DA + +M ++PN +T+TAL+ GK++E +++
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 291 EMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKA 350
M++ + P D + L+ C G L+ A + M R Y LI FCK+
Sbjct: 283 VMIQMSVYP-DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 351 EMYDRAIKLLDKLVEKEIIL----------------RP---QSTLDMEAS--------SY 383
+ + +K+ ++ +K ++ RP Q + +S +Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 384 NPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGR 442
N ++ LC NG+ KA + F + K+ + ++ V + +I+G K G + AF++ +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 443 RGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFR 488
+G+ + Y +I + R+G +A + M EDG P S+++
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 172/379 (45%), Gaps = 10/379 (2%)
Query: 75 ARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFK 134
A C L M K G + D F L+ Y +++++ +FD + +G + +V +Y L +
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 135 LILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISL 194
+ + A FN+M + G P TYN ++ G + A DM R I
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 195 DVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIF 254
+V+T+ +I+ + + K+ EA++L+ M + ++ P V +Y ++I G D+A ++F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 255 DEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCK 314
M+ PN V YT L+ G C + ++ + K+ EM ++ + + + L+ C
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV-VANTITYTVLIQGYCL 375
Query: 315 SGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQS 374
G + A +V M P + Y +L++ C ++A+ + + + ++E
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE------- 428
Query: 375 TLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSA 433
+D+ +Y +IQ +C G+ A F L KG+ + + + +I G + G A
Sbjct: 429 -MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 434 FEIVKIMGRRGVPRDADAY 452
+ K M G + Y
Sbjct: 488 DSLFKKMKEDGFLPNESVY 506
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 6/331 (1%)
Query: 37 EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
E A+ F + G F + T+ +I L + LNHA + M G + + +
Sbjct: 170 EDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 97 LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
L+ + G ++ + M + +E +V ++ AL ++ G+ M AK +N M+
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
+ P TY ++ G + L+ A + F M+ G + V Y T+I+G+ + K++++
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
K+F EM +K + I+YT +I+GY V R D A +F++M S P+ TY LL GL
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ--CKSGHLNAAADVLKAMIRLSIP 334
C GK+ + + M +R + D ++ + +Q CK G + A D+ ++ +
Sbjct: 409 CCNGKVEKALMIFEYMRKREM---DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 335 TEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
Y +I FC+ + A L K+ E
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 147/295 (49%), Gaps = 2/295 (0%)
Query: 34 KNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDM 93
++ HA++ F + G + T+ ++ L +G+ A +L DM K+ ++ +
Sbjct: 202 RHLNHAVELFNQMGTNGS-RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 94 FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
F LI+++ K G + E+ +++++M Q+ V V +Y +L + G A++ F M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
G P Y ++ GF S ++E ++ F +M +G+ + +TY +I GY + D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
A+++F +M + P + +Y ++ G + + AL IF+ M+ ++ N VTYT ++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
G+C GK+ + + + + + P + + ++ C+ G ++ A + K M
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKP-NVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 111/215 (51%)
Query: 55 DRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
D T+ +I L G L+ AR + M + G +E ++ LI + K V++ +KIF
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
M Q GV + +Y L + GR +A+ FN+M S P TYNV+L G +
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
K+E A+ FE M+ R + +++VTY +I G + K+++A LF + K ++P VI+Y
Sbjct: 412 GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITY 471
Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTY 269
TTMI G+ +A +F +MK PN Y
Sbjct: 472 TTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 192/466 (41%), Gaps = 25/466 (5%)
Query: 193 SLDVVTYNTMINGYNRFKKM----------DEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
SL + + I ++ ++K+ ++A LF M P++I +T ++
Sbjct: 35 SLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIA 94
Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
+ R D + +F++M+ + P T ++ +C + + L +M++ P D
Sbjct: 95 KMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEP-DL 153
Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
F LL C + A + ++ + Y LI CK + A++L ++
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
+ RP +YN ++ LC G+ G A R +MK+ + +P + F L
Sbjct: 214 MGTNGS--RPN------VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI-EPNVITFTAL 264
Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
I K G A E+ +M + V D Y LI G +A+ M +G
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
P ++ +++ + RV+ ++ M +KGV N +++ + G + A
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 541 RIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALL 597
+ M + P+ ++ LL L GK A+ + ++ R+ I++ +Y ++ +
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 598 AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADIL 643
GK +A+ + + KG + + +I+G + G +AD L
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 139/588 (23%), Positives = 245/588 (41%), Gaps = 79/588 (13%)
Query: 39 ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
AL FF+ + + LF H T MI L G+++ + +L M +G ED+F +I
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 99 ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
Y + G+ + +V++F +K+ G + SVK Y+ + +L R M + M +G E
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT-------------------- 198
P TYNV+L + K++ A + +M ++G D V+
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 199 ----------YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMI---------- 238
YN +ING + A +L EM EK I P VISY+T+I
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 239 -------------------------KGYVAVERADDALRIFDEM-KSFDVKPNAVTYTAL 272
KG DAL ++++M + F ++PN V Y L
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 273 LPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLS 332
+ G C G +V+ V M E P + + L+ K G L+ A + M+
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT-YGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 333 IPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCH 392
Y ++E C+ + A L++ ++ KE ++N I+ LC
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIE-IMSKE-------NCAPSVPTFNAFIKGLCD 469
Query: 393 NGQTGKAEIFFRQLMKKGVLDP--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDAD 450
G+ AE FRQ+ ++ P V +N L+ G +K + A+ + + + RGV +
Sbjct: 470 AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS 529
Query: 451 AYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSM 510
Y L+ G P A + M+ DG SP ++ + + G+ + A++++ +
Sbjct: 530 TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589
Query: 511 VEKGVKENLDLVA--KILEALLMRGHVEEALGRIDLMMQSGSVPNFDS 556
K D+++ ++ L E+ + ++ M+ +G VP+ +
Sbjct: 590 SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIAT 637
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/547 (20%), Positives = 221/547 (40%), Gaps = 111/547 (20%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+N V + L G + +R ++R G F + T+ +++ L + K++ A+ +L++M
Sbjct: 149 YNHVLDTLLGENRIQMIYMVYRDMKRDG-FEPNVFTYNVLLKALCKNNKVDGAKKLLVEM 207
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKI---------------------------FD 115
KG D + +I S + G+V+E ++ F+
Sbjct: 208 SNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFE 267
Query: 116 IMKQL---GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
+M+++ G+ +V SY L ++ G+ +A + +ML G P +T + ++ G F
Sbjct: 268 LMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF 327
Query: 173 LSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
L A+ + M + G+ +VV YNT++ G+ + +A +F+ M+E P +
Sbjct: 328 LRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNI 387
Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT--------------------- 270
+Y ++I G+ D A+ I+++M + PN V YT
Sbjct: 388 RTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI 447
Query: 271 --------------ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
A + GLCDAG++ +KV R+M +++ P + + +LL K+
Sbjct: 448 MSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN 507
Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
+ A + + + + + Y L+ C A + A++L+ K++
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD---------- 557
Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEI 436
GK+ D + N +I + K+G + A ++
Sbjct: 558 --------------------GKSP------------DEITMNMIILAYCKQGKAERAAQM 585
Query: 437 VKIM--GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
+ ++ GRR D +Y +I R D L+ MI G P+ + + ++
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Query: 495 FEDGRVQ 501
D V+
Sbjct: 646 ILDDIVR 652
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 121/284 (42%), Gaps = 36/284 (12%)
Query: 402 FFRQLMKKGVL--DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
FF+ + + P+ F +IR + +G DS +++ M +G D +I +I Y
Sbjct: 62 FFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY 121
Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
+ G A + E G P+ ++ V+++L + R+Q V + M G + N+
Sbjct: 122 RQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNV 181
Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLS--------EKGKTIA-- 569
+L+AL V+ A + M G P+ S +V+S ++G+ +A
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER 241
Query: 570 -----------------------AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAY 606
A +L+ + + ++ SY +++ L +G+ A+
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301
Query: 607 SILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRMIRG 649
S L +++++G + + L+ G G T A D+ ++MIRG
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 151/651 (23%), Positives = 290/651 (44%), Gaps = 42/651 (6%)
Query: 17 LVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR 76
+V D+ + N L +E A F + + G ++H+ +LG LN
Sbjct: 192 VVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFV---LDSHIGTSLLLGFCRGLNLRD 248
Query: 77 CI-LLDMPKKGVQWDEDM--FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
+ + D+ K V + + +LI + G ++E+ + D M + G + S ++Y L
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
K + RG A F++M+ G +P HTY V++ G K+E A M I
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRI 253
V+TYN +INGY + ++ A +L M+++ +P V ++ +++G V + A+ +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 254 FDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQC 313
M + P+ V+Y L+ GLC G M K+L M I P D F ++ C
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP-DCLTFTAIINAFC 487
Query: 314 KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQ 373
K G + A+ L M+R I + LI+ CK A+ +L+ LV+ I+ P
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 374 STLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP-VAFNNLIRGHSKEGNPDS 432
S N ++ L + + ++ K G++ V + L+ G + G+
Sbjct: 548 --------SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 433 AFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVME 492
+F I+++M G + Y +I + G +A+ L +M + G SP + +++
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 493 SLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMR----GHVEEALGRIDLMMQS 548
+G++ A +++MVE+G + N + + +L+ ++ + EE+ D+ ++
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVS-DIALRE 718
Query: 549 GSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDC--------------IIDLASY-EKVL 593
+ L+SV+ + G I+ L F + R C +++ + EK +
Sbjct: 719 TDPECINELISVVEQLGGCISG--LCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM 776
Query: 594 DALL----AAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
D ++ + K ++ +++ G V +KS +I GL +EG+ ++A
Sbjct: 777 DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 145/664 (21%), Positives = 297/664 (44%), Gaps = 41/664 (6%)
Query: 11 QNKIRALVPQFDHNLVYNVLHGAK-NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRV 69
+ +++LV + N+ V+ + +++ ++FF WV + + D ++++++
Sbjct: 57 NSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSS 116
Query: 70 GKLNHARCILLDMPKKGVQWDEDM------FEVLIESYGKK------GIVQESVKIFDI- 116
G A +++ + K+ + +++M F+ L E +G + + S+ D+
Sbjct: 117 GLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLG 176
Query: 117 ---------MKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVM 167
M+ G + Y + + + G A+ + +K+L G H +
Sbjct: 177 FLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSL 236
Query: 168 LWGFFLSLKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
L GF L L A++ F+ M K + + V+Y+ +I+G +++EA L +M EK
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296
Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
+P+ +YT +IK D A +FDEM KPN TYT L+ GLC GK+ E
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
V R+MV+ I P + + L+ CK G + A ++L M + + + L+E
Sbjct: 357 GVCRKMVKDRIFPSVIT-YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
C+ +A+ LL ++++ + L + SYN +I LC G A +
Sbjct: 416 LCRVGKPYKAVHLLKRMLD--------NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Query: 407 MKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
+ D + F +I K+G D A + +M R+G+ D LI+ + G+
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
DA L+++++ +++ L + +V+ ++ + + G+ ++ +
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
++ L+ G + + ++LM SG +PN + +++ L + G+ A KLL
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG--LNQEG--NTK 638
+ +Y ++ + GK A + ++E+G + + L+ G L+Q+G N++
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSE 707
Query: 639 QADI 642
++ +
Sbjct: 708 ESTV 711
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/460 (19%), Positives = 198/460 (43%), Gaps = 11/460 (2%)
Query: 58 THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
T +++E L RVGK A +L M G+ D + VLI+ ++G + + K+ M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
+E ++ A+ ++G+ +A + ML +GI T ++ G K
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
A+ E + I + N +++ ++ K+ E + ++ + + P+V++YTT+
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
+ G + + RI + MK PN YT ++ GLC G++ E +K+L M + +
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFC--------- 348
P ++ + ++ +G L+ A + ++AM+ Y L++ F
Sbjct: 648 SP-NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNS 706
Query: 349 -KAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLM 407
++ + D A++ D E+I + + ++ LC G+T ++ + ++
Sbjct: 707 EESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVL 766
Query: 408 KKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPAD 467
++GV A + ++ + + E++ ++ + G ++ +I+ ++G+
Sbjct: 767 ERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAER 826
Query: 468 AKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
A+ + ++ S + +E L E S V+
Sbjct: 827 ARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVI 866
>sp|Q84VG6|PP160_ARATH Pentatricopeptide repeat-containing protein At2g17525,
mitochondrial OS=Arabidopsis thaliana GN=At2g17525 PE=2
SV=2
Length = 626
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 142/639 (22%), Positives = 277/639 (43%), Gaps = 67/639 (10%)
Query: 18 VPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARC 77
VP DH + ++ K++ AL+ FRW F H R T+ + L + +
Sbjct: 40 VPSDDH--IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQ 97
Query: 78 ILLDMPKK-GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLI 136
+L +MP G+ D+ +F +I +G+ +++ + + D++ + G++ S+K ++++ ++
Sbjct: 98 LLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL 157
Query: 137 LRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDV 196
++ + + + KM++ GI +TY +++ G L+ ++ + + MK+ G++ +
Sbjct: 158 VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNA 217
Query: 197 VTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDE 256
V YNT+++ + K+ A L +EMK EP +++ +I Y ++ ++ + ++
Sbjct: 218 VVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEK 273
Query: 257 MKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSG 316
S P+ VT T ++ LC+ G++ E +VL E VE D L+ C G
Sbjct: 274 CFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVL-ERVESKGGKVDVVACNTLVKGYCALG 332
Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
+ A M R Y +LI +C M D A+ + + +
Sbjct: 333 KMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM--------KTDAI 384
Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-----LDPVAFNNLIRGHSKEGNPD 431
+++N +I+ L G+T + +DP +N +I G KE +
Sbjct: 385 RWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP--YNCVIYGFYKENRWE 442
Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVM 491
A E + M + PR D LI S KG D KTA D MI +G P+ + ++
Sbjct: 443 DALEFLLKM-EKLFPRAVDRSFKLI-SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLI 500
Query: 492 ESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSV 551
+ G++ EE+L I+ M+ G +
Sbjct: 501 HRYSQHGKI-----------------------------------EESLELINDMVTRGYL 525
Query: 552 P---NFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSI 608
P F++++ ++ K + +K ++ R C+ D SY +L+ L G A+ +
Sbjct: 526 PRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLL 585
Query: 609 LFKIMEKGGVTDWKSSDKLIAGLNQEG----NTKQADIL 643
+++EK V D L+ L+Q+ N+ DI+
Sbjct: 586 FSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQDII 624
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 140/606 (23%), Positives = 270/606 (44%), Gaps = 15/606 (2%)
Query: 39 ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLI 98
AL F + G+F ++ ++ L R + C D+ KGV D +F I
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNI-LLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAI 280
Query: 99 ESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIE 158
++ K G V+E+VK+F M++ GV +V +++ + + GRY A + KM+ G+E
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340
Query: 159 PTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKL 218
PT TY++++ G + ++ A ++M +G +V+ YN +I+ + +++A ++
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 400
Query: 219 FAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCD 278
M K + T +Y T+IKGY +AD+A R+ EM S N ++T+++ LC
Sbjct: 401 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 460
Query: 279 AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAG 338
+ + EM+ R + P + L+ CK G + A ++ + +
Sbjct: 461 HLMFDSALRFVGEMLLRNMSP-GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 519
Query: 339 HYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGK 398
L+ C+A D A + ++KEI+ R M+ SYN +I C + +
Sbjct: 520 TSNALLHGLCEAGKLDEAFR-----IQKEILGR---GCVMDRVSYNTLISGCCGKKKLDE 571
Query: 399 AEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIE 457
A +F +++K+G+ D ++ LI G + A + R G+ D Y +I+
Sbjct: 572 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 631
Query: 458 SYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKE 517
+ + + D M+ P + ++ ++ + GR+ A + + M KG+
Sbjct: 632 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 691
Query: 518 NLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLL 574
N +++ + + VEEA + M G PN + +L+ + G+ + LL
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751
Query: 575 DFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQE 634
++ + +Y ++ G A +L ++ EKG V D + + I G ++
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 811
Query: 635 GNTKQA 640
G +A
Sbjct: 812 GGVLEA 817
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 217/484 (44%), Gaps = 12/484 (2%)
Query: 58 THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
T+ +++ L R ++ A +L +M KKG + ++ LI+S+ + G + ++++I D+M
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404
Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
G+ + +Y+ L K + G+ A+R +MLS G + ++ ++ L
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464
Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTM 237
++A+RF +M R +S T+I+G + K +A +L+ + K + +
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524
Query: 238 IKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYI 297
+ G + D+A RI E+ + V+Y L+ G C K+ E L EMV+R +
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584
Query: 298 PPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAI 357
P DN + L+ + A R + + Y ++I+ CKAE +
Sbjct: 585 KP-DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 643
Query: 358 KLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--V 415
+ D+++ K + +P + + YN +I+ C +G+ A + R+ MK + P
Sbjct: 644 EFFDEMMSKNV--QPNTVV------YNHLIRAYCRSGRLSMA-LELREDMKHKGISPNSA 694
Query: 416 AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSM 475
+ +LI+G S + A + + M G+ + Y LI+ Y + G+ + L M
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 754
Query: 476 IEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHV 535
P + ++ DG V ASR++ M EKG+ + + + L +G V
Sbjct: 755 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 814
Query: 536 EEAL 539
EA
Sbjct: 815 LEAF 818
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/518 (22%), Positives = 231/518 (44%), Gaps = 11/518 (2%)
Query: 37 EHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEV 96
E A++ F +E AG+ + T +I+ LG G+ + A M ++G++ + +
Sbjct: 290 EEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 97 LIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEG 156
L++ + + ++ + M + G +V Y+ L + G A + M+S+G
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 157 IEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAE 216
+ T TYN ++ G+ + + + A R ++M S G +++ ++ ++I D A
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468
Query: 217 KLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGL 276
+ EM +N+ P TT+I G + AL ++ + + + T ALL GL
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528
Query: 277 CDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
C+AGK+ E ++ +E++ R D + L+ C L+ A L M++ + +
Sbjct: 529 CEAGKLDEAFRIQKEILGRGC-VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 587
Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQT 396
Y ILI + AI+ D ++ P + +Y+ MI C +T
Sbjct: 588 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGML--P------DVYTYSVMIDGCCKAERT 639
Query: 397 GKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
+ + FF ++M K V + V +N+LIR + + G A E+ + M +G+ ++ Y L
Sbjct: 640 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
I+ +AK + M +G P + ++++ + G++ +++ M K V
Sbjct: 700 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 759
Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
N ++ G+V EA ++ M + G VP+
Sbjct: 760 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 797
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 4/319 (1%)
Query: 31 HGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWD 90
HG K+S+ +F+++ + F D T ++ L GKL+ A I ++ +G D
Sbjct: 496 HG-KHSKALELWFQFLNKG--FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552
Query: 91 EDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFN 150
+ LI K + E+ D M + G++ +Y L + + A ++++
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 612
Query: 151 KMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFK 210
G+ P +TY+VM+ G + + E FF++M S+ + + V YN +I Y R
Sbjct: 613 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672
Query: 211 KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYT 270
++ A +L +MK K I P +YT++IKG + R ++A +F+EM+ ++PN YT
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 271 ALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
AL+ G G+MV+V+ +LREM + + P + + ++G + G++ A+ +L M
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHP-NKITYTVMIGGYARDGNVTEASRLLNEMRE 791
Query: 331 LSIPTEAGHYGILIENFCK 349
I ++ Y I + K
Sbjct: 792 KGIVPDSITYKEFIYGYLK 810
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 4/282 (1%)
Query: 9 RLQNKIR---ALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEI 65
R+Q +I ++ + +N + + G K + A F + + GL D T+ +I
Sbjct: 539 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL-KPDNYTYSILICG 597
Query: 66 LGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERS 125
L + K+ A D + G+ D + V+I+ K +E + FD M V+ +
Sbjct: 598 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657
Query: 126 VKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFE 185
Y+ L + R GR MA M +GI P TY ++ G + ++E A FE
Sbjct: 658 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 717
Query: 186 DMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVE 245
+M+ G+ +V Y +I+GY + +M + E L EM KN+ P I+YT MI GY
Sbjct: 718 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 777
Query: 246 RADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQK 287
+A R+ +EM+ + P+++TY + G G ++E K
Sbjct: 778 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 204/417 (48%), Gaps = 10/417 (2%)
Query: 79 LLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
++++ +K Q D + LI + K + ++ ++ D M+ +Y+ + +
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVT 198
RG+ +A + N++LS+ +PT TY +++ L ++ A++ ++M SRG+ D+ T
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 199 YNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
YNT+I G + +D A ++ ++ K EP VISY +++ + + ++ ++ +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
S PN VTY+ L+ LC GK+ E +L+ M E+ + P D + L+ C+ G L
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP-DAYSYDPLIAAFCREGRL 384
Query: 319 NAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDM 378
+ A + L+ MI + +Y ++ CK D+A+++ KL E+ P S
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL--GEVGCSPNS---- 438
Query: 379 EASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIV 437
SSYN M L +G +A ++M G+ D + +N++I +EG D AFE++
Sbjct: 439 --SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESL 494
M Y ++ + + DA L+SM+ +G P + + ++E +
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 217/486 (44%), Gaps = 12/486 (2%)
Query: 56 RETH-LKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIF 114
R+T LK+ R G + +L M +KG D + LI+ + + ++V++
Sbjct: 88 RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM 147
Query: 115 DIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLS 174
+I+++ G + V +Y+AL + R A R ++M S+ P TYN+M+
Sbjct: 148 EILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 175 LKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISY 234
KL+ A++ + S V+TY +I +DEA KL EM + ++P + +Y
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 235 TTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVE 294
T+I+G D A + ++ +P+ ++Y LL L + GK E +K++ +M
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 295 RYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYD 354
P + + L+ C+ G + A ++LK M + +A Y LI FC+ D
Sbjct: 327 EKCDP-NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 355 RAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LD 413
AI+ L+ ++ + + +YN ++ LC NG+ +A F +L + G +
Sbjct: 386 VAIEFLETMISDGCL--------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 414 PVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALD 473
++N + G+ A ++ M G+ D Y +I R+G +A L
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 474 SMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRG 533
M P+ + V+ + R++ A V++SMV G + N ++E + G
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Query: 534 HVEEAL 539
+ EA+
Sbjct: 558 YRAEAM 563
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 192/430 (44%), Gaps = 47/430 (10%)
Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
E+ L M K P VI T +IKG+ + A+R+ + ++ F +P+ Y AL+
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
G C ++ + +VL M + P D + ++G C G L+ A VL ++ +
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSP-DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
Y ILIE D A+KL+D+++ + L+P
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRG--LKP--------------------- 261
Query: 394 GQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYI 453
D +N +IRG KEG D AFE+V+ + +G D +Y
Sbjct: 262 -------------------DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 454 CLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEK 513
L+ + L +G+ + + + M + P + ++ +L DG+++ A ++K M EK
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 514 GVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAA 570
G+ + ++ A G ++ A+ ++ M+ G +P N++++L+ L + GK A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 571 VKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
+++ C + +SY + AL ++G + A ++ ++M G D + + +I+
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 631 LNQEGNTKQA 640
L +EG +A
Sbjct: 483 LCREGMVDEA 492
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 193/419 (46%), Gaps = 15/419 (3%)
Query: 8 TRLQNKIRALVPQFDHNLV-YNVLHGAKNSEHALQFFRWVERAGLFNHDRET---HLKMI 63
TR+ +++R+ F + V YN++ G+ S L V L ++ + T + +I
Sbjct: 178 TRVLDRMRS--KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235
Query: 64 EILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVE 123
E G ++ A ++ +M +G++ D + +I K+G+V + ++ ++ G E
Sbjct: 236 EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE 295
Query: 124 RSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRF 183
V SY+ L + +L +G++ ++ KM SE +P TY++++ K+E A+
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 184 FEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVA 243
+ MK +G++ D +Y+ +I + R ++D A + M P +++Y T++
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 244 VERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNS 303
+AD AL IF ++ PN+ +Y + L +G + ++ EM+ I P D
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP-DEI 474
Query: 304 VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKL 363
+ ++ C+ G ++ A ++L M Y I++ FCKA + AI +L+ +
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 364 VEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIR 422
V RP T +Y +I+ + G +A L++ + +F L R
Sbjct: 535 VGNGC--RPNET------TYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHR 585
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 206/463 (44%), Gaps = 9/463 (1%)
Query: 53 NHDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVK 112
+H+ T+ I R +L+ A IL M K G L+ + + E+V
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 113 IFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFF 172
+ D M ++G + ++ L + + + A +M+ +G +P TY ++ G
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 173 LSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVI 232
+ + A+ M+ I DVV YNT+I+G ++K MD+A LF +M+ K I+P V
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 233 SYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREM 292
+Y +I R DA R+ +M ++ P+ V + AL+ GK+VE +K+ EM
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 293 VERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEM 352
V+ D + L+ CK + +V + M + + Y LI F +A
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 353 YDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV- 411
D A + ++V + P + +YN ++ LC+NG A + F + K+ +
Sbjct: 407 CDNAQMVFKQMVSDGV--HP------DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 412 LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
LD V + +I K G + +++ + +GV + Y ++ + RKG +A
Sbjct: 459 LDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKG 514
M EDG P S + +++ + DG ++ ++K M G
Sbjct: 519 FVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 201/432 (46%), Gaps = 13/432 (3%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
++L+ HG + SE + VE + D T ++ L + K + A ++ M
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMG--YQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
KG Q D + +I K+G ++ + + M++ +E V Y+ + + +
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
A FNKM ++GI+P TYN ++ + A R DM + I+ D+V +N +
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 203 INGYNRFKKMDEAEKLFAEM-KEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
I+ + + K+ EAEKL+ EM K K+ P V++Y T+IKG+ +R ++ + +F EM
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
+ N VTYT L+ G A Q V ++MV + P D + LL C +G++ A
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP-DIMTYNILLDGLCNNGNVETA 445
Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
V + M + + + Y +IE CKA + L L K + +P
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV--KPN------VV 497
Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
+Y M+ C G +A+ F ++ + G L + +N LIR ++G+ ++ E++K M
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Query: 441 GRRGVPRDADAY 452
G DA +
Sbjct: 558 RSCGFAGDASTF 569
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 202/446 (45%), Gaps = 14/446 (3%)
Query: 125 SVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFF 184
S+ + L I + ++ + +M + GI +TY++ + F +L A+
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 185 EDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAV 244
M G +VT N+++NG+ ++ EA L +M E +P +++TT++ G
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 245 ERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSV 304
+A +A+ + + M +P+ VTY A++ GLC G+ +L +M E+ D +
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVI 252
Query: 305 FMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
+ ++ CK H++ A D+ M I + Y LI C + A +LL ++
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNLIR 422
EK I P +N +I G+ +AE + +++K P VA+N LI+
Sbjct: 313 EKNI--NPDLVF------FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 423 GHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
G K + E+ + M +RG+ + Y LI + + + +A+ M+ DG P
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 483 ASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
+ +++ L +G V+TA V + M ++ +K ++ ++EAL G VE+
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 543 DLMMQSGSVPN---FDSLLSVLSEKG 565
+ G PN + +++S KG
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKG 510
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 213/485 (43%), Gaps = 12/485 (2%)
Query: 94 FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
F L+ + K + + + M+ LG+ ++ +Y RR + +A KM+
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
G P+ T N +L GF ++ A+ + M G D VT+ T+++G + K
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
EA L M K +P +++Y +I G D AL + ++M+ ++ + V Y ++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
GLC M + + +M + I P D + L+ C G + A+ +L M+ +I
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKP-DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
+ + LI+ F K A KL D++V+ + + +YN +I+ C
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP-------DVVAYNTLIKGFCKY 369
Query: 394 GQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
+ + FR++ ++G++ + V + LI G + + D+A + K M GV D Y
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
L++ G A + M + + +++E+L + G+V+ + S+
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 513 KGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIA 569
KGVK N+ ++ +G EEA M + G +PN +++L+ G A
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
Query: 570 AVKLL 574
+ +L+
Sbjct: 550 SAELI 554
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+N++ + L N E AL F ++++ + D T+ MIE L + GK+ + +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDM-KLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
KGV+ + + ++ + +KG+ +E+ +F MK+ G + +Y+ L + LR G
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVM 167
+ +M S G T+ ++
Sbjct: 548 AASAELIKEMRSCGFAGDASTFGLV 572
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 248/527 (47%), Gaps = 34/527 (6%)
Query: 39 ALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDMPKKG------------ 86
L+++ W+ + + E K++ L + + R L + G
Sbjct: 84 CLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAI 143
Query: 87 -----VQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
V + + ++L+ +Y + + F G + S S L +L+ R
Sbjct: 144 SMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 203
Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
+ + +M+ I+P T+NV++ + K+ A EDMK G S +VV+YNT
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 202 MINGYNRF---KKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMK 258
+I+GY + KM +A+ + EM E ++ P + ++ +I G+ + ++++F EM
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 259 SFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHL 318
DVKPN ++Y +L+ GLC+ GK+ E + +MV + P + + L+ CK+ L
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP-NLITYNALINGFCKNDML 382
Query: 319 NAAADVLKAMI-RLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLD 377
A D+ ++ + ++PT Y +LI+ +CK D L +++ E+E I+
Sbjct: 383 KEALDMFGSVKGQGAVPTTR-MYNMLIDAYCKLGKIDDGFALKEEM-EREGIVP------ 434
Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIV 437
+ +YN +I LC NG A+ F QL KG+ D V F+ L+ G+ ++G A ++
Sbjct: 435 -DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 438 KIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSL--FRSVMESLF 495
K M + G+ Y +++ Y ++G A T + + +E ++ + +++
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGN-LKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRI 542
+ G+++ A+ ++ M+EKG+ N + E ++ +G V + G +
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 178/415 (42%), Gaps = 28/415 (6%)
Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
+ E ++ EM + I+P V ++ +I + + A + ++MK + PN V+Y L+
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 274 PGLCD---AGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIR 330
G C GKM + VL+EMVE + P + + F L+ K +L + V K M+
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSP-NLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324
Query: 331 LSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHL 390
+ Y LI C AI + DK+V + Q L +YN +I
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV----QPNL----ITYNALINGF 376
Query: 391 CHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDA 449
C N +A F + +G + +N LI + K G D F + + M R G+ D
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 450 DAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKS 509
Y CLI R G AK D + G P F +ME G + A+ ++K
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 510 MVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSG---------SVPNFDSLLSV 560
M + G+K + ++M+G+ +E + M++ +V +++ LL
Sbjct: 496 MSKMGLKPR-----HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 561 LSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
S+KGK A LL+ L + + + +YE V + ++ G + LF + K
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTK 605
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 129/270 (47%), Gaps = 7/270 (2%)
Query: 378 MEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPV-AFNNLIRGHSKEGNPDSAFEI 436
+ A S P++ L ++ E +++++++ + V FN +I K G + A ++
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 437 VKIMGRRGVPRDADAYICLIESYLR---KGEPADAKTALDSMIEDGHSPASSLFRSVMES 493
++ M G + +Y LI+ Y + G+ A L M+E+ SP + F +++
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305
Query: 494 LFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN 553
++D + + +V K M+++ VK N+ ++ L G + EA+ D M+ +G PN
Sbjct: 306 FWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN 365
Query: 554 ---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILF 610
+++L++ + A+ + G+ + Y ++DA GK + +++
Sbjct: 366 LITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKE 425
Query: 611 KIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
++ +G V D + + LIAGL + GN + A
Sbjct: 426 EMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 6/237 (2%)
Query: 420 LIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDG 479
L+ ++ + FE K G G A + L+ + L++ AD + MI
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218
Query: 480 HSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA---LLMRGHVE 536
P F V+ +L + G++ A VM+ M G N+ +++ L G +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 537 EALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVL 593
+A + M+++ PN F+ L+ + ++K+ L +D ++ SY ++
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 594 DALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIRGE 650
+ L GK A S+ K++ G + + + LI G + K+A + ++G+
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 204/426 (47%), Gaps = 10/426 (2%)
Query: 94 FEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKML 153
F L+ + K + +++ M+ LG+ ++ + + L R + +A + KM+
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 154 SEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMD 213
G EP+ T+ +L GF ++ A+ F+ M G +VV YNT+I+G + K++D
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 214 EAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALL 273
A L M++ I P V++Y ++I G + R DA R+ M ++ P+ T+ AL+
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 274 PGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSI 333
G++ E ++ EM+ R + P + + + G+ C L+ A ++ M+
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL-CMYSRLDEAEEMFGFMVSKGC 322
Query: 334 PTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHN 393
+ Y ILI +CK++ + +KL ++ ++ ++ ++T+ +Y +IQ C
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV---RNTV-----TYTILIQGYCRA 374
Query: 394 GQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAY 452
G+ AE FR+++ GV + + +N L+ G G + A I+ M + G+ D Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 453 ICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVE 512
+I + GE ADA S+ G P + ++M L++ G + A + + M E
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 513 KGVKEN 518
G+ N
Sbjct: 495 DGILPN 500
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 10/402 (2%)
Query: 82 MPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGR 141
M G+ + +L+ + + + ++ M +LG E S+ ++ +L R R
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 142 YMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNT 201
A F++M+ G +P YN ++ G S +++ A+ M+ GI DVVTYN+
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 202 MINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFD 261
+I+G + +A ++ + M ++ I P V ++ +I V R +A ++EM
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 262 VKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAA 321
+ P+ VTY+ L+ GLC ++ E +++ MV + P D + L+ CKS +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP-DVVTYSILINGYCKSKKVEHG 345
Query: 322 ADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEAS 381
+ M + + Y ILI+ +C+A + A ++ ++V + P
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV--HPNII------ 397
Query: 382 SYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFEIVKIM 440
+YN ++ LC NG+ KA + + K G+ D V +N +IRG K G A++I +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 441 GRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSP 482
+G+ D Y ++ +KG +A M EDG P
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 179/376 (47%), Gaps = 10/376 (2%)
Query: 54 HDRETHLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKI 113
H+ T ++ R +L+ A L M K G + F L+ + + V +++ +
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 114 FDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFL 173
FD M +G + +V Y+ + + + + A N+M +GI P TYN ++ G
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 174 SLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
S + A R M R I DV T+N +I+ + ++ EAE+ + EM ++++P +++
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
Y+ +I G R D+A +F M S P+ VTY+ L+ G C + K+ K+ EM
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
+R + ++ + L+ C++G LN A ++ + M+ + Y +L+ C
Sbjct: 354 QRGV-VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL- 412
++A+ +L + ++ +D + +YN +I+ +C G+ A + L +G++
Sbjct: 413 EKALVILADM--------QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 413 DPVAFNNLIRGHSKEG 428
D + ++ G K+G
Sbjct: 465 DIWTYTTMMLGLYKKG 480
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 137/266 (51%), Gaps = 1/266 (0%)
Query: 23 HNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHARCILLDM 82
+N + + L +K ++AL +E+ G+ D T+ +I L G+ + A ++ M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGI-GPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 83 PKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRY 142
K+ + D F LI++ K+G V E+ + ++ M + ++ + +Y L + R
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 143 MMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTM 202
A+ F M+S+G P TY++++ G+ S K+E ++ F +M RG+ + VTY +
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 203 INGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
I GY R K++ AE++F M + P +I+Y ++ G + + AL I +M+ +
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKV 288
+ VTY ++ G+C AG++ + +
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/468 (20%), Positives = 198/468 (42%), Gaps = 45/468 (9%)
Query: 183 FFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV 242
FF ++ R + + ++ +++ ++ KK D L+ +M+ I + + ++ +
Sbjct: 69 FFHMVQCRPLP-SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 243 AVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDN 302
+ AL +M +P+ VT+ +LL G C ++ + + +MV P +
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP-NV 186
Query: 303 SVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDK 362
++ ++ CKS ++ A D+L M + I + Y LI C + + A +++
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 363 LVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDP--VAFNNL 420
+ ++EI P + ++N +I G+ +AE F+ +++++ LDP V ++ L
Sbjct: 247 MTKREIY--P------DVFTFNALIDACVKEGRVSEAEEFYEEMIRRS-LDPDIVTYSLL 297
Query: 421 IRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGH 480
I G D A E+ M +G D Y LI Y + + M + G
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 481 SPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALG 540
+ + +++ G++ A + + MV GV N+ +L L G +E+AL
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 541 RIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAG 600
+ M ++G D+ D+ +Y ++ + AG
Sbjct: 418 ILADMQKNG----MDA----------------------------DIVTYNIIIRGMCKAG 445
Query: 601 KTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADILSRMIR 648
+ +A+ I + +G + D + ++ GL ++G ++AD L R ++
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 6/254 (2%)
Query: 15 RALVPQ-FDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLN 73
R + P F N + + A +F+ + R L + D T+ +I L +L+
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-DPDIVTYSLLIYGLCMYSRLD 308
Query: 74 HARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALF 133
A + M KG D + +LI Y K V+ +K+F M Q GV R+ +Y L
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 134 KLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGIS 193
+ R G+ +A+ F +M+ G+ P TYNV+L G + K+E A+ DM+ G+
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 194 LDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYV--AVERADDAL 251
D+VTYN +I G + ++ +A ++ + + + P + +YTTM+ G + R DAL
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 252 RIFDEMKSFDVKPN 265
F +MK + PN
Sbjct: 489 --FRKMKEDGILPN 500
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 3/245 (1%)
Query: 400 EIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESY 459
++FF + + + F+ L+ SK D + + M G+P + L+ +
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 460 LRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENL 519
R + + A + L MI+ GH P+ F S++ RV A + MV G K N+
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 520 DLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDF 576
+ I++ L V+ AL ++ M + G P+ ++SL+S L G+ A +++
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 577 CLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGN 636
R+ D+ ++ ++DA + G+ A +++ + D + LI GL
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 637 TKQAD 641
+A+
Sbjct: 307 LDEAE 311
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 133/601 (22%), Positives = 272/601 (45%), Gaps = 61/601 (10%)
Query: 35 NSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKLNHAR---CILLDMPKKG-VQWD 90
N E L+ F + F D + + KM+ IL R + C L+ + G V W
Sbjct: 83 NPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWG 142
Query: 91 E------------DMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILR 138
E +F+++++ Y +KG+V+ ++ +FD M G S+ S ++L ++R
Sbjct: 143 ELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVR 202
Query: 139 RGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR-GISLDVV 197
+G +A +++M+S + P T ++++ + S ++ A+ F ++ +S G+ L+VV
Sbjct: 203 KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVV 262
Query: 198 TYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEM 257
TYN++INGY ++ ++ M E+ + V++YT++IKGY ++A +F+ +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 258 KSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMK-LLGVQCKSG 316
K + + Y L+ G C G++ + +V M+E I + N+ L+ CKSG
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE--IGVRTNTTICNSLINGYCKSG 380
Query: 317 HLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTL 376
L A + M S+ + Y L++ +C+A D A+KL D++ +KE++ P
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVV--PT--- 435
Query: 377 DMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPDSAFE 435
+YN +++ G ++ ++K+GV D ++ + L+ K G+ + A +
Sbjct: 436 ---VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 436 IVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLF 495
+ + + RG+ D +I + + +AK LD++ PA ++++ +
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYY 552
Query: 496 EDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPNFD 555
+ G ++ A V + M KG+ +++ ++ H+ + + + G P
Sbjct: 553 KVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT-- 610
Query: 556 SLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSILFKIMEK 615
+A+Y ++ G AY+ F+++EK
Sbjct: 611 ------------------------------VATYGALITGWCNIGMIDKAYATCFEMIEK 640
Query: 616 G 616
G
Sbjct: 641 G 641
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/617 (23%), Positives = 269/617 (43%), Gaps = 53/617 (8%)
Query: 86 GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMA 145
G++ + + LI Y G V+ ++ +M + GV R+V +Y +L K ++G A
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 146 KRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMING 205
+ F + + + +H Y V++ G+ + ++ A+R ++M G+ + N++ING
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 206 YNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPN 265
Y + ++ EAE++F+ M + +++P +Y T++ GY D+AL++ D+M +V P
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 266 AVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVL 325
+TY LL G G +V + + M++R + + S LL K G N A +
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISC-STLLEALFKLGDFNEAMKLW 494
Query: 326 KAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNP 385
+ ++ + T+ ++I CK E + A ++LD + I R + + +Y
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN----IFRCKPAV----QTYQA 546
Query: 386 MIQHLCHNGQTGKAEIFFRQLMKKGVLDPVA-FNNLIRGHSKEGNPDSAFEIVKIMGRRG 444
+ G +A + +KG+ + +N LI G K + + ++V + RG
Sbjct: 547 LSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARG 606
Query: 445 VPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTAS 504
+ Y LI + G A MIE G + ++ + SLF ++ A
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEAC 666
Query: 505 RVMKSMVE--------KGVKENLDLVA-------KILEA--------------------- 528
+++ +V+ + +KE L+ A KI E+
Sbjct: 667 LLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAI 726
Query: 529 --LLMRGHVEEALGRI-DLMMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDC 582
L G +E+A DL+ +P+ + L+ + G A L D +
Sbjct: 727 AGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGI 786
Query: 583 IIDLASYEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQADI 642
I ++ +Y ++ L G A +L K+ +KG + + + LI GL + GN +A
Sbjct: 787 IPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMR 846
Query: 643 L-SRMIRGEMSRGSQKE 658
L +MI + RGS K+
Sbjct: 847 LKEKMIEKGLVRGSDKQ 863
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 139/597 (23%), Positives = 247/597 (41%), Gaps = 88/597 (14%)
Query: 58 THLKMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIM 117
T+ +I+ + G + A + + +K + D+ M+ VL++ Y + G ++++V++ D M
Sbjct: 298 TYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM 357
Query: 118 KQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKL 177
++GV + ++L + G+ + A++ F++M ++P HTYN ++ G+ + +
Sbjct: 358 IEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 417
Query: 178 ETAIRFFEDMKSRGISLDVVTYNTMINGYNR----------------------------- 208
+ A++ + M + + V+TYN ++ GY+R
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 477
Query: 209 ----FK--KMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDV 262
FK +EA KL+ + + + I+ MI G +E+ ++A I D + F
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 263 KPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAA 322
KP TY AL G G + E V M + I P ++ L+ K HLN A
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTI-EMYNTLISGAFKYRHLNKVA 596
Query: 323 D-VLKAMIRLSIPTEAGHYGILIENFCKAEMYDRA-----------IKL----------- 359
D V++ R PT A YG LI +C M D+A I L
Sbjct: 597 DLVIELRARGLTPTVAT-YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANS 655
Query: 360 ---LDKLVEKEIILRPQSTLDMEASSYNPMIQHL------CHNGQTGKAEIFFRQLMKKG 410
LDK+ E ++L+ D+ Y + + L C Q + K
Sbjct: 656 LFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLL 715
Query: 411 VLDPVAFNNLIRGHSKEGNPDSAFEIVK--IMGRRGVPRDADAYICLIESYLRKGEPADA 468
V + + +N I G K G + A ++ + R +P D Y LI G+ A
Sbjct: 716 VPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP-DEYTYTILIHGCAIAGDINKA 774
Query: 469 KTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEA 528
T D M G P + ++++ L + G V A R++ + +KG+ N A
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN----AITYNT 830
Query: 529 LLMRGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIID 585
L ID +++SG+V L + EKG + K D + ++ ++D
Sbjct: 831 L------------IDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQGDVDIPKEVVLD 875
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 229/482 (47%), Gaps = 28/482 (5%)
Query: 4 RAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGL-FNHDRETHLKM 62
+ W RL F LV +++ +N + ALQ F + ++ F H+ +T+ +
Sbjct: 41 KPWPQRL----------FPKRLV-SMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSI 89
Query: 63 IEILGRVGKLNHARCILLDMPKK--GVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
+ L R + ++ D+ ++ E++F L+ +YG G + S++IF +
Sbjct: 90 LFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDF 149
Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYF-NKMLSEGIEPTRHTYNVMLWGFFLSLKLET 179
GV+RSV+S + L ++++ R+ + F N S GI P T N+++ +E+
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 180 AIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIK 239
A + +++ S G+ ++VTY T++ GY M+ A+++ EM ++ P +YT ++
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 240 GYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPP 299
GY + R +A + D+M+ +++PN VTY ++ LC K E + + EM+ER P
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 300 KDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKL 359
D+S+ K++ C+ ++ A + + M++ + + LI CK A KL
Sbjct: 330 -DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKL 388
Query: 360 LDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLDPVAF-- 417
D+ + I S L +YN +I +C G+ +A + + ++ P AF
Sbjct: 389 FDEFEKGSI----PSLL-----TYNTLIAGMCEKGELTEAGRLWDDMYERKC-KPNAFTY 438
Query: 418 NNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIE 477
N LI G SK GN +++ M G + ++ L E + G+ DA + +
Sbjct: 439 NVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVM 498
Query: 478 DG 479
+G
Sbjct: 499 NG 500
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 179/387 (46%), Gaps = 12/387 (3%)
Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEK- 225
+L + L+ + E+++R F + G+ V + NT++N + ++ D +F KE
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 226 NIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEV 285
I P + + ++K + A ++ DE+ S + PN VTYT +L G G M
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 286 QKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIE 345
++VL EM++R P D + + L+ CK G + AA V+ M + I YG++I
Sbjct: 246 KRVLEEMLDRGWYP-DATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 346 NFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQ 405
CK + A + D+++E+ + P S+L + +I LC + + +A +R+
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFM--PDSSLCCK------VIDALCEDHKVDEACGLWRK 356
Query: 406 LMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGE 464
++K + D + LI KEG A ++ + +P Y LI KGE
Sbjct: 357 MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIAGMCEKGE 415
Query: 465 PADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAK 524
+A D M E P + + ++E L ++G V+ RV++ M+E G N
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475
Query: 525 ILEALLMRGHVEEALGRIDLMMQSGSV 551
+ E L G E+A+ + + + +G V
Sbjct: 476 LFEGLQKLGKEEDAMKIVSMAVMNGKV 502
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/459 (20%), Positives = 190/459 (41%), Gaps = 56/459 (12%)
Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS----YTTMIKGYVAVER 246
G + + TY++++ +R + D E L A+++ N P + + +++ Y R
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADLR--NSYPPIKCGENLFIDLLRNYGLAGR 135
Query: 247 ADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERY-IPPKDNSVF 305
+ ++RIF + F VK + + LL L + V + + E + I P ++F
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITP---NIF 192
Query: 306 MKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVE 365
C +L++ CK + A K+LD++
Sbjct: 193 ------TC---------------------------NLLVKALCKKNDIESAYKVLDEI-- 217
Query: 366 KEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGH 424
P L +Y ++ G A+ +++ +G D + L+ G+
Sbjct: 218 ------PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271
Query: 425 SKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPAS 484
K G A ++ M + + + Y +I + ++ + +A+ D M+E P S
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Query: 485 SLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDL 544
SL V+++L ED +V A + + M++ + L++ ++ L G V EA D
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD- 390
Query: 545 MMQSGSVPN---FDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEKVLDALLAAGK 601
+ GS+P+ +++L++ + EKG+ A +L D R C + +Y +++ L G
Sbjct: 391 EFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGN 450
Query: 602 TLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA 640
+L +++E G + + L GL + G + A
Sbjct: 451 VKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 212/454 (46%), Gaps = 11/454 (2%)
Query: 107 VQESVKIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNV 166
+ +++ +F M + S+ ++ L I++ +Y + KM GI +T+N+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 167 MLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKN 226
++ F ++ A+ M G D VT +++NG+ R ++ +A L +M E
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 227 IEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQ 286
+P +++Y +I +R +DA F E++ ++PN VTYTAL+ GLC++ + +
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 287 KVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIEN 346
++L +M+++ I P + + LL K+G + A ++ + M+R+SI + Y LI
Sbjct: 246 RLLSDMIKKKITP-NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 347 FCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQL 406
C + D A ++ D +V K + + SYN +I C + FR++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCL--------ADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 407 MKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEP 465
++G++ + V +N LI+G + G+ D A E M G+ D Y L+ GE
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 466 ADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKI 525
A + M + + +V+ + + G+V+ A + S+ KG+K ++ +
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 526 LEALLMRGHVEEALGRIDLMMQSGSVPNFDSLLS 559
+ L +G + E M Q G + N D LS
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQEGLMKN-DCTLS 509
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 221/472 (46%), Gaps = 19/472 (4%)
Query: 13 KIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVGKL 72
K R D N + + + K + + + +E G+ N D T +I ++
Sbjct: 78 KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN-DLYTFNIVINCFCCCFQV 136
Query: 73 NHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYDAL 132
+ A IL M K G + D L+ + ++ V ++V + D M ++G + + +Y+A+
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 133 FKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGI 192
+ + R A +F ++ +GI P TY ++ G S + A R DM + I
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 193 SLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALR 252
+ +V+TY+ +++ + + K+ EA++LF EM +I+P +++Y+++I G +R D+A +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 253 IFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQ 312
+FD M S + V+Y L+ G C A ++ + K+ REM +R + + + L+
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQGF 375
Query: 313 CKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRP 372
++G ++ A + M I + Y IL+ C ++A+ + + + ++E
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE----- 430
Query: 373 QSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGV-LDPVAFNNLIRGHSKEGNPD 431
+D++ +Y +I+ +C G+ +A F L KG+ D V + ++ G +G
Sbjct: 431 ---MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 432 SAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
+ M + G+ ++ + L G+ + + M+ G++P+
Sbjct: 488 EVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPS 531
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 189/421 (44%), Gaps = 13/421 (3%)
Query: 149 FNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNR 208
F+ M+ P+ +N +L K + I + M+ GI D+ T+N +IN +
Sbjct: 73 FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132
Query: 209 FKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVT 268
++ A + +M + EP ++ +++ G+ R DA+ + D+M KP+ V
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192
Query: 269 YTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAM 328
Y A++ LC ++ + +E+ + I P + + L+ C S + AA +L M
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRP-NVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 329 IRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQ 388
I+ I Y L++ F K A +L +++V I D + +Y+ +I
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI--------DPDIVTYSSLIN 303
Query: 389 HLCHNGQTGKAEIFFRQLMKKGVL-DPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPR 447
LC + + +A F ++ KG L D V++N LI G K + ++ + M +RG+
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 448 DADAYICLIESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVM 507
+ Y LI+ + + G+ A+ M G SP + ++ L ++G ++ A +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 508 KSMVEKGVKENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEK 564
+ M ++ + ++ ++ + G VEEA + G P+ + +++S L K
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 565 G 565
G
Sbjct: 484 G 484
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 194/464 (41%), Gaps = 46/464 (9%)
Query: 175 LKLETAIRFFEDM-KSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVIS 233
+KL AI F DM KSR +V +N +++ + KK D L +M+ I + +
Sbjct: 64 IKLNDAIDLFSDMVKSRPFP-SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 234 YTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMV 293
+ +I + + AL I +M +P+ VT +L+ G C ++ + ++ +MV
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 294 ERYIPPKDNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMY 353
E P D + ++ CK+ +N A D K + R I Y L+ C + +
Sbjct: 183 EIGYKP-DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 354 DRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKGVLD 413
A +LL +++K+I P +Y+ ++ NG+ +A+ F ++++ + D
Sbjct: 242 SDAARLLSDMIKKKIT--PN------VITYSALLDAFVKNGKVLEAKELFEEMVRMSI-D 292
Query: 414 P--VAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTA 471
P V +++LI G D A ++ +M +G D +Y LI + + D
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 472 LDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGVKENLDLVAKILEALLM 531
M + G + + ++++ F+ G V A
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA---------------------------- 384
Query: 532 RGHVEEALGRIDLMMQSGSVPNFDSLLSVLSEKGKTIAAVKLLDFCLGRDCIIDLASYEK 591
+E ++D S + ++ LL L + G+ A+ + + R+ +D+ +Y
Sbjct: 385 ----QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 592 VLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAGLNQEG 635
V+ + GK A+S+ + KG D + +++GL +G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/585 (25%), Positives = 261/585 (44%), Gaps = 45/585 (7%)
Query: 1 MAERAWTTRLQNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHL 60
+AE+A++ L + ++ + + + L A E A R + G F D T+
Sbjct: 431 LAEKAYSEMLAAGV--VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG-FIPDTSTYS 487
Query: 61 KMIEILGRVGKLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQL 120
K++ L K+ A + +M + G+ D + ++++S+ K G+++++ K F+ M+++
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 121 GVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETA 180
G +V +Y AL L+ + A F MLSEG P TY+ ++ G + ++E A
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 181 IRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKG 240
+ FE M DV Y FK+ D+ + P V++Y ++ G
Sbjct: 608 CQIFERMCGSKDVPDVDMY---------FKQYDDNSE----------RPNVVTYGALLDG 648
Query: 241 YVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPK 300
+ R ++A ++ D M +PN + Y AL+ GLC GK+ E Q+V EM E P
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708
Query: 301 DNSVFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLL 360
+ + L+ K + A+ VL M+ S Y +I+ CK D A KL+
Sbjct: 709 LYT-YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 361 DKLVEKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMK---KGVL-DPVA 416
+ EK +P +Y MI G GK E L + KGV + V
Sbjct: 768 QMMEEKGC--QPN------VVTYTAMIDGF---GMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 417 FNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMI 476
+ LI K G D A +++ M + P Y +IE + E ++ LD +
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIG 874
Query: 477 EDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMV--EKGVKENLDLVAKILEALLMRGH 534
+D +P S++R ++++L + R++ A R+++ + + + ++E+L +
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 535 VEEALGRIDLMMQSGSVP---NFDSLLSVLSEKGKTIAAVKLLDF 576
VE A M + G +P +F SL+ L K A+ LLDF
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDF 979
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/561 (23%), Positives = 252/561 (44%), Gaps = 35/561 (6%)
Query: 112 KIFDIMKQLGVERSVKSYDALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGF 171
K + M GV + + + + + G+Y A +M+ +G P TY+ +L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 172 FLSLKLETAIRFFEDMKSRGISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTV 231
+ K+E A FE+MK G+ DV TY M++ + + +++A K F EM+E P V
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553
Query: 232 ISYTTMIKGYVAVERADDALRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLRE 291
++YT +I Y+ ++ A +F+ M S PN VTY+AL+ G C AG++ + ++
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 292 M--------VERYIPPKDNS-------VFMKLLGVQCKSGHLNAAADVLKAMIRLSIPTE 336
M V+ Y D++ + LL CKS + A +L AM
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 337 AGHYGILIENFCKAEMYDRAIKLLDKLVEKEIILRPQSTLDMEASSYNPMI-QHLCHNGQ 395
Y LI+ CK D A ++ ++ E +TL +Y+ +I ++ Q
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF----PATL----YTYSSLIDRYFKVKRQ 725
Query: 396 TGKAEIFFRQLMKKGVLDPVAFNNLIRGHSKEGNPDSAFEIVKIMGRRGVPRDADAYICL 455
+++ + L + V + +I G K G D A++++++M +G + Y +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 456 IESYLRKGEPADAKTALDSMIEDGHSPASSLFRSVMESLFEDGRVQTASRVMKSMVEKGV 515
I+ + G+ L+ M G +P +R +++ ++G + A +++ M +
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845
Query: 516 KENLDLVAKILEALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGKTIAAVK 572
+ K++E E+LG +D + Q + P + L+ L + + A++
Sbjct: 846 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903
Query: 573 LL-DFCLGRDCIIDLAS-YEKVLDALLAAGKTLNAYSILFKIMEKGGVTDWKSSDKLIAG 630
LL + ++D +S Y ++++L A K A+ + ++ +KG + + +S LI G
Sbjct: 904 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963
Query: 631 LNQEGNTKQA----DILSRMI 647
L + +A D +S M+
Sbjct: 964 LFRNSKISEALLLLDFISHMV 984
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 131/698 (18%), Positives = 262/698 (37%), Gaps = 74/698 (10%)
Query: 11 QNKIRALVPQFDHNLVYNVLHGAKNSEHALQFFRWVERAGLFNHDRETHLKMIEILGRVG 70
Q +R + +LV VL + FF W R + H + +++++ R
Sbjct: 120 QKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDD 179
Query: 71 KLNHARCILLDMPKKGVQWDEDMFEVLIESYGKKGIVQESVKIFDIMKQLGVERSVKSYD 130
L + + + VL+ + + G +++ +K S +Y+
Sbjct: 180 DEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 239
Query: 131 ALFKLILRRGRYMMAKRYFNKMLSEGIEPTRHTYNVMLWGFFLSLKLETAIRFFEDMKSR 190
L + L+ R A +M + T + K A+ E +
Sbjct: 240 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TE 296
Query: 191 GISLDVVTYNTMINGYNRFKKMDEAEKLFAEMKEKNIEPTVISYTTMIKGYVAVERADDA 250
D V Y +I+G +EA M+ + P V++Y+T++ G + ++
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 251 LRIFDEMKSFDVKPNAVTYTALLPGLCDAGKMVEVQKVLREMVERYIPPKDNSVFMKLLG 310
R+ + M P+ + +L+ C +G K+L++MV+ P V+ L+G
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP-GYVVYNILIG 415
Query: 311 VQC------KSGHLNAAADVLKAMIRLSIPTEAGHYGILIENFCKAEMYDRAIKLLDKLV 364
C L+ A M+ + + C A Y++A ++ +++
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475
Query: 365 EKEIILRPQSTLDMEASSYNPMIQHLCHNGQTGKAEIFFRQLMKKG-VLDPVAFNNLIRG 423
+ I P + S+Y+ ++ +LC+ + A + F ++ + G V D + ++
Sbjct: 476 GQGFI--P------DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 424 HSKEGNPDSAFEIVKIMGRRGVPRDADAYICLIESYLRKGEPADAKTALDSMIEDGHSPA 483
K G + A + M G + Y LI +YL+ + + A ++M+ +G P
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 484 SSLFRSVMESLFEDGRVQTASRVMKSMV----------------EKGVKENLDLVAKILE 527
+ ++++ + G+V+ A ++ + M + + N+ +L+
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647
Query: 528 ALLMRGHVEEALGRIDLMMQSGSVPN---FDSLLSVLSEKGK------------------ 566
VEEA +D M G PN +D+L+ L + GK
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707
Query: 567 ---TIA--------------AVKLLDFCLGRDCIIDLASYEKVLDALLAAGKTLNAYSIL 609
T + A K+L L C ++ Y +++D L GKT AY ++
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 610 FKIMEKGGVTDWKSSDKLIAGLNQEGNTKQA-DILSRM 646
+ EKG + + +I G G + ++L RM
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 233,170,289
Number of Sequences: 539616
Number of extensions: 9704942
Number of successful extensions: 38958
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 28402
Number of HSP's gapped (non-prelim): 2983
length of query: 662
length of database: 191,569,459
effective HSP length: 124
effective length of query: 538
effective length of database: 124,657,075
effective search space: 67065506350
effective search space used: 67065506350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)