Query 006072
Match_columns 662
No_of_seqs 838 out of 4927
Neff 10.0
Searched_HMMs 46136
Date Thu Mar 28 17:56:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006072.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006072hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03192 Voltage-dependent pot 100.0 6.5E-98 1E-102 847.5 67.8 651 1-662 149-820 (823)
2 KOG0498 K+-channel ERG and rel 100.0 3.9E-63 8.5E-68 524.7 33.5 444 1-446 174-642 (727)
3 KOG0500 Cyclic nucleotide-gate 100.0 2.8E-53 6.1E-58 414.7 32.8 339 1-350 85-432 (536)
4 KOG0499 Cyclic nucleotide-gate 100.0 5.7E-45 1.2E-49 361.2 26.4 327 1-350 318-650 (815)
5 KOG0501 K+-channel KCNQ [Inorg 100.0 3.8E-45 8.3E-50 361.3 21.2 344 1-354 305-671 (971)
6 KOG4412 26S proteasome regulat 100.0 8.7E-37 1.9E-41 259.6 14.1 176 375-551 33-212 (226)
7 KOG4412 26S proteasome regulat 100.0 9.2E-37 2E-41 259.4 13.7 197 380-576 3-205 (226)
8 PHA02791 ankyrin-like protein; 100.0 6.8E-35 1.5E-39 286.1 23.2 198 375-576 25-227 (284)
9 PHA02791 ankyrin-like protein; 100.0 6.7E-33 1.5E-37 272.0 21.9 215 345-570 30-247 (284)
10 KOG0509 Ankyrin repeat and DHH 100.0 3.1E-33 6.8E-38 284.1 16.4 207 379-585 43-254 (600)
11 PHA02875 ankyrin repeat protei 100.0 2.7E-32 5.9E-37 289.8 24.0 223 348-572 5-231 (413)
12 PHA02878 ankyrin repeat protei 100.0 2.7E-32 5.8E-37 294.4 23.3 205 378-584 35-308 (477)
13 PHA02874 ankyrin repeat protei 100.0 7.4E-32 1.6E-36 287.6 25.5 174 408-583 119-295 (434)
14 PHA02875 ankyrin repeat protei 100.0 7.1E-32 1.5E-36 286.6 24.3 198 381-578 3-203 (413)
15 PHA03100 ankyrin repeat protei 100.0 5.5E-32 1.2E-36 293.8 22.8 216 354-571 82-311 (480)
16 PHA03100 ankyrin repeat protei 100.0 8.2E-32 1.8E-36 292.4 22.8 238 344-583 34-290 (480)
17 PHA02946 ankyin-like protein; 100.0 4E-31 8.6E-36 279.2 23.4 197 371-569 63-269 (446)
18 PHA03095 ankyrin-like protein; 100.0 5.6E-31 1.2E-35 285.3 23.2 211 373-583 76-297 (471)
19 PHA02946 ankyin-like protein; 100.0 1.8E-30 4E-35 274.2 25.4 201 380-582 37-248 (446)
20 PHA02798 ankyrin-like protein; 100.0 1.4E-30 3.1E-35 281.4 23.5 211 359-571 52-319 (489)
21 KOG0509 Ankyrin repeat and DHH 100.0 2.5E-31 5.5E-36 270.3 15.9 201 352-553 51-255 (600)
22 PHA02716 CPXV016; CPX019; EVM0 100.0 2.4E-30 5.3E-35 280.5 21.8 215 372-586 204-545 (764)
23 PHA02874 ankyrin repeat protei 100.0 1.2E-29 2.5E-34 270.7 24.2 234 348-584 4-262 (434)
24 PHA02716 CPXV016; CPX019; EVM0 100.0 7.3E-30 1.6E-34 276.8 21.8 205 377-581 174-404 (764)
25 PHA03095 ankyrin-like protein; 100.0 1.6E-29 3.4E-34 274.0 24.0 224 359-584 28-265 (471)
26 PHA02878 ankyrin repeat protei 100.0 1.9E-29 4.2E-34 272.2 24.4 214 349-566 41-324 (477)
27 PHA02795 ankyrin-like protein; 100.0 3.5E-29 7.5E-34 254.2 23.4 185 386-572 83-291 (437)
28 PHA02876 ankyrin repeat protei 100.0 2.1E-29 4.6E-34 283.8 23.5 212 372-583 265-483 (682)
29 PHA02989 ankyrin repeat protei 100.0 3.2E-29 7E-34 271.2 23.8 189 380-568 69-314 (494)
30 PHA02859 ankyrin repeat protei 100.0 3.5E-29 7.5E-34 237.5 19.9 175 377-554 18-203 (209)
31 PHA02989 ankyrin repeat protei 100.0 5.2E-29 1.1E-33 269.6 22.9 225 356-584 14-297 (494)
32 PHA02876 ankyrin repeat protei 100.0 8.9E-29 1.9E-33 278.7 25.2 231 350-582 150-414 (682)
33 KOG0510 Ankyrin repeat protein 100.0 3.2E-29 7E-34 259.3 17.7 213 370-582 177-416 (929)
34 PHA02798 ankyrin-like protein; 100.0 1.4E-28 2.9E-33 266.0 23.5 200 385-584 43-299 (489)
35 KOG0508 Ankyrin repeat protein 100.0 2.8E-29 6.1E-34 244.1 13.1 188 377-565 39-237 (615)
36 KOG0510 Ankyrin repeat protein 100.0 1E-28 2.2E-33 255.6 18.0 211 371-581 145-382 (929)
37 PLN03192 Voltage-dependent pot 100.0 5.4E-27 1.2E-31 267.4 32.7 185 391-579 505-692 (823)
38 PHA02917 ankyrin-like protein; 100.0 3.4E-27 7.3E-32 258.5 21.0 194 374-570 26-257 (661)
39 KOG0502 Integral membrane anky 99.9 1.1E-27 2.4E-32 210.4 12.1 223 350-576 67-291 (296)
40 PHA02859 ankyrin repeat protei 99.9 6.7E-27 1.4E-31 221.9 18.6 173 410-585 18-201 (209)
41 KOG0508 Ankyrin repeat protein 99.9 1.8E-27 3.9E-32 231.6 12.8 195 386-581 10-220 (615)
42 PHA02730 ankyrin-like protein; 99.9 2.2E-26 4.8E-31 244.9 20.4 190 375-564 36-258 (672)
43 PHA02917 ankyrin-like protein; 99.9 5.3E-26 1.2E-30 249.1 20.9 192 393-584 12-237 (661)
44 PHA02792 ankyrin-like protein; 99.9 1.3E-25 2.9E-30 236.3 20.5 234 348-583 74-450 (631)
45 KOG4177 Ankyrin [Cell wall/mem 99.9 7.7E-27 1.7E-31 257.5 10.9 196 373-568 400-631 (1143)
46 PHA02795 ankyrin-like protein; 99.9 1.9E-25 4E-30 227.1 17.2 184 396-584 65-262 (437)
47 KOG4177 Ankyrin [Cell wall/mem 99.9 7.7E-26 1.7E-30 249.7 15.2 188 370-557 464-658 (1143)
48 PHA02730 ankyrin-like protein; 99.9 8.8E-25 1.9E-29 232.7 20.0 198 372-570 227-525 (672)
49 PHA02792 ankyrin-like protein; 99.9 1.4E-23 3E-28 221.1 20.0 198 371-570 166-480 (631)
50 TIGR00870 trp transient-recept 99.9 7.9E-24 1.7E-28 240.5 17.9 220 346-569 18-283 (743)
51 KOG0502 Integral membrane anky 99.9 3E-24 6.6E-29 188.8 8.7 198 383-580 65-263 (296)
52 KOG0505 Myosin phosphatase, re 99.9 1.6E-23 3.4E-28 208.9 13.4 201 382-582 42-270 (527)
53 KOG0507 CASK-interacting adapt 99.9 2.1E-23 4.5E-28 214.9 13.5 211 370-581 39-259 (854)
54 KOG0514 Ankyrin repeat protein 99.9 1.8E-23 3.9E-28 197.7 11.5 174 391-565 237-429 (452)
55 TIGR00870 trp transient-recept 99.9 7.6E-23 1.6E-27 232.5 17.6 201 377-581 14-262 (743)
56 PHA02743 Viral ankyrin protein 99.9 4.4E-22 9.5E-27 181.6 14.6 148 402-577 9-162 (166)
57 KOG0505 Myosin phosphatase, re 99.9 2E-22 4.3E-27 201.1 12.0 197 355-553 50-274 (527)
58 KOG0507 CASK-interacting adapt 99.9 3.4E-22 7.4E-27 206.0 12.2 219 344-565 48-279 (854)
59 PHA02743 Viral ankyrin protein 99.9 1.1E-21 2.4E-26 179.0 14.2 123 435-584 9-136 (166)
60 PHA02741 hypothetical protein; 99.9 2.1E-21 4.5E-26 178.2 15.1 137 406-569 14-158 (169)
61 PHA02884 ankyrin repeat protei 99.9 1E-20 2.2E-25 185.6 16.9 154 407-568 26-187 (300)
62 KOG0514 Ankyrin repeat protein 99.9 1.9E-21 4.2E-26 184.0 10.5 162 370-532 258-429 (452)
63 PHA02736 Viral ankyrin protein 99.8 2E-20 4.4E-25 169.3 12.0 135 406-570 10-153 (154)
64 PHA02741 hypothetical protein; 99.8 5.9E-20 1.3E-24 168.6 13.2 134 373-536 14-158 (169)
65 KOG0512 Fetal globin-inducing 99.8 8.6E-20 1.9E-24 154.9 12.2 143 381-554 64-209 (228)
66 PHA02884 ankyrin repeat protei 99.8 1.8E-19 3.9E-24 176.8 15.5 129 439-567 25-161 (300)
67 PHA02736 Viral ankyrin protein 99.8 6.6E-20 1.4E-24 166.0 10.8 133 373-537 10-153 (154)
68 KOG3676 Ca2+-permeable cation 99.8 2.9E-19 6.2E-24 187.4 16.1 236 382-629 103-393 (782)
69 KOG0195 Integrin-linked kinase 99.8 1.7E-19 3.6E-24 165.4 10.3 135 436-570 24-160 (448)
70 KOG4369 RTK signaling protein 99.8 3.7E-19 8.1E-24 188.8 7.9 204 375-578 752-961 (2131)
71 KOG4369 RTK signaling protein 99.8 3.3E-19 7.3E-24 189.2 5.9 216 355-572 767-988 (2131)
72 KOG0512 Fetal globin-inducing 99.7 1.3E-17 2.7E-22 141.8 10.8 133 416-579 66-201 (228)
73 PF12796 Ank_2: Ankyrin repeat 99.7 3.2E-17 6.9E-22 133.3 11.4 85 482-570 2-86 (89)
74 PF12796 Ank_2: Ankyrin repeat 99.7 3.4E-17 7.4E-22 133.1 10.8 89 450-540 1-89 (89)
75 KOG0195 Integrin-linked kinase 99.7 3.6E-17 7.8E-22 150.2 9.9 107 367-473 21-127 (448)
76 KOG3676 Ca2+-permeable cation 99.7 3.1E-16 6.7E-21 164.9 15.6 184 371-554 134-368 (782)
77 cd00204 ANK ankyrin repeats; 99.7 6.6E-16 1.4E-20 134.6 15.1 123 410-563 4-126 (126)
78 cd00204 ANK ankyrin repeats; 99.7 1.9E-15 4.2E-20 131.6 14.8 123 377-530 4-126 (126)
79 KOG3713 Voltage-gated K+ chann 99.7 2.8E-16 6E-21 157.2 10.4 124 14-161 308-432 (477)
80 KOG4214 Myotrophin and similar 99.6 5.7E-15 1.2E-19 111.9 7.9 98 450-547 6-104 (117)
81 KOG4214 Myotrophin and similar 99.6 1.6E-14 3.4E-19 109.6 9.5 100 480-580 5-104 (117)
82 COG0666 Arp FOG: Ankyrin repea 99.6 6.7E-14 1.4E-18 136.1 16.1 135 406-566 66-203 (235)
83 PRK09392 ftrB transcriptional 99.6 5.5E-14 1.2E-18 137.1 14.6 127 227-354 6-132 (236)
84 cd00038 CAP_ED effector domain 99.5 1.2E-13 2.7E-18 118.0 12.6 114 235-348 1-114 (115)
85 PF11834 DUF3354: Domain of un 99.5 5.5E-14 1.2E-18 103.2 7.7 68 588-658 2-69 (69)
86 PF13857 Ank_5: Ankyrin repeat 99.5 2.7E-14 5.9E-19 103.6 4.9 55 496-550 1-56 (56)
87 PF00027 cNMP_binding: Cyclic 99.5 2.3E-13 5E-18 111.0 10.4 91 253-343 1-91 (91)
88 KOG1419 Voltage-gated K+ chann 99.5 2.4E-13 5.2E-18 136.4 12.4 127 15-160 197-323 (654)
89 COG0666 Arp FOG: Ankyrin repea 99.5 2.8E-13 6.1E-18 131.7 12.2 130 373-533 66-203 (235)
90 PRK11753 DNA-binding transcrip 99.5 8.5E-13 1.8E-17 126.5 14.3 117 238-354 7-124 (211)
91 KOG1545 Voltage-gated shaker-l 99.5 9.4E-15 2E-19 138.5 -0.2 121 14-157 324-444 (507)
92 smart00100 cNMP Cyclic nucleot 99.4 1.1E-12 2.3E-17 113.0 12.6 116 235-350 1-118 (120)
93 KOG1113 cAMP-dependent protein 99.4 2.4E-13 5.2E-18 130.0 8.4 127 225-356 119-245 (368)
94 PRK10402 DNA-binding transcrip 99.4 5.6E-13 1.2E-17 128.7 11.1 112 243-354 23-134 (226)
95 PF13637 Ank_4: Ankyrin repeat 99.4 2.8E-13 6.1E-18 97.8 6.4 54 510-563 1-54 (54)
96 KOG1710 MYND Zn-finger and ank 99.4 9.8E-13 2.1E-17 121.3 10.8 60 508-567 77-136 (396)
97 PTZ00322 6-phosphofructo-2-kin 99.4 1.6E-12 3.6E-17 144.3 13.9 100 479-578 84-190 (664)
98 PTZ00322 6-phosphofructo-2-kin 99.4 1.1E-12 2.4E-17 145.6 12.1 100 416-515 85-193 (664)
99 PF13857 Ank_5: Ankyrin repeat 99.4 3.9E-13 8.5E-18 97.5 4.6 55 399-453 1-56 (56)
100 COG0664 Crp cAMP-binding prote 99.4 4.8E-12 1E-16 121.6 13.2 125 231-355 3-127 (214)
101 KOG0515 p53-interacting protei 99.4 1.4E-12 3E-17 129.8 9.4 92 382-473 552-643 (752)
102 KOG1710 MYND Zn-finger and ank 99.4 3.5E-12 7.5E-17 117.8 11.4 119 380-498 12-133 (396)
103 KOG0818 GTPase-activating prot 99.4 3.8E-13 8.2E-18 132.6 5.4 159 480-662 136-303 (669)
104 PF07885 Ion_trans_2: Ion chan 99.4 3.6E-12 7.8E-17 100.2 10.0 55 106-160 24-78 (79)
105 PF13637 Ank_4: Ankyrin repeat 99.4 1.3E-12 2.9E-17 94.3 6.5 54 413-466 1-54 (54)
106 KOG0614 cGMP-dependent protein 99.4 1.1E-12 2.4E-17 131.0 7.2 118 220-342 146-263 (732)
107 PRK11161 fumarate/nitrate redu 99.3 1.1E-11 2.3E-16 120.9 13.8 124 231-355 16-140 (235)
108 KOG0515 p53-interacting protei 99.3 2.5E-12 5.4E-17 128.0 8.6 95 481-575 554-648 (752)
109 KOG0614 cGMP-dependent protein 99.3 4.4E-12 9.6E-17 126.8 8.1 121 223-343 267-389 (732)
110 PLN02868 acyl-CoA thioesterase 99.3 2.1E-11 4.6E-16 128.3 12.4 113 227-342 7-119 (413)
111 TIGR03697 NtcA_cyano global ni 99.2 7.3E-11 1.6E-15 111.3 10.7 96 259-354 1-98 (193)
112 PRK09391 fixK transcriptional 99.2 1.3E-10 2.8E-15 112.5 11.4 108 245-355 32-139 (230)
113 COG2905 Predicted signal-trans 99.2 5.7E-10 1.2E-14 113.7 15.6 125 227-355 6-130 (610)
114 PRK13918 CRP/FNR family transc 99.1 4.2E-10 9E-15 107.0 10.9 98 250-354 5-104 (202)
115 KOG4390 Voltage-gated A-type K 99.0 4.2E-12 9.1E-17 121.7 -6.3 137 2-162 272-416 (632)
116 PF00520 Ion_trans: Ion transp 99.0 2.4E-09 5.3E-14 101.4 12.4 133 15-155 61-200 (200)
117 KOG1420 Ca2+-activated K+ chan 99.0 1E-10 2.2E-15 117.7 1.7 125 105-238 287-418 (1103)
118 KOG1113 cAMP-dependent protein 99.0 9.6E-10 2.1E-14 105.6 6.9 117 221-341 233-349 (368)
119 PRK10537 voltage-gated potassi 98.9 3.2E-08 6.9E-13 102.0 15.4 54 106-159 168-221 (393)
120 KOG0506 Glutaminase (contains 98.9 2.2E-09 4.7E-14 106.1 5.7 90 478-567 507-597 (622)
121 KOG0506 Glutaminase (contains 98.8 4.4E-09 9.6E-14 104.0 5.8 97 373-469 499-596 (622)
122 KOG0705 GTPase-activating prot 98.8 2.5E-08 5.5E-13 101.0 10.7 92 480-571 627-722 (749)
123 KOG0818 GTPase-activating prot 98.8 2.7E-08 5.9E-13 99.0 9.8 90 378-467 131-221 (669)
124 PF13606 Ank_3: Ankyrin repeat 98.8 8.6E-09 1.9E-13 63.3 4.0 29 509-537 1-29 (30)
125 KOG0782 Predicted diacylglycer 98.7 3.3E-08 7.1E-13 99.7 8.2 117 450-566 870-990 (1004)
126 PF00023 Ank: Ankyrin repeat H 98.7 1.9E-08 4E-13 63.9 4.1 33 509-541 1-33 (33)
127 KOG0783 Uncharacterized conser 98.7 8.6E-09 1.9E-13 108.5 3.4 76 477-552 52-128 (1267)
128 PF13606 Ank_3: Ankyrin repeat 98.7 2.4E-08 5.2E-13 61.3 3.8 29 412-440 1-29 (30)
129 KOG0782 Predicted diacylglycer 98.6 8.1E-08 1.7E-12 97.0 8.1 114 419-532 872-989 (1004)
130 PF00023 Ank: Ankyrin repeat H 98.6 7.8E-08 1.7E-12 61.0 4.2 32 412-443 1-32 (33)
131 KOG0522 Ankyrin repeat protein 98.5 1.7E-07 3.7E-12 94.9 7.9 85 481-565 24-110 (560)
132 KOG0783 Uncharacterized conser 98.5 1.8E-07 3.8E-12 98.9 5.7 83 373-455 45-128 (1267)
133 KOG0705 GTPase-activating prot 98.5 5.1E-07 1.1E-11 91.8 8.5 92 381-472 625-720 (749)
134 KOG0521 Putative GTPase activa 98.4 1.3E-07 2.9E-12 104.5 4.5 91 475-565 654-744 (785)
135 KOG2968 Predicted esterase of 98.4 2.2E-07 4.7E-12 99.3 5.3 116 241-356 498-613 (1158)
136 KOG3684 Ca2+-activated K+ chan 98.4 9.4E-06 2E-10 81.2 16.2 89 105-200 286-374 (489)
137 KOG0522 Ankyrin repeat protein 98.4 5.8E-07 1.3E-11 91.1 7.9 87 382-468 22-110 (560)
138 KOG3609 Receptor-activated Ca2 98.4 1.5E-06 3.1E-11 93.5 11.2 133 378-538 23-159 (822)
139 KOG2384 Major histocompatibili 98.3 1.6E-06 3.4E-11 76.1 7.3 69 500-568 2-71 (223)
140 KOG3609 Receptor-activated Ca2 98.3 3.6E-06 7.8E-11 90.6 10.5 136 412-575 24-163 (822)
141 PF01007 IRK: Inward rectifier 98.2 7.3E-06 1.6E-10 82.3 11.0 99 50-161 38-141 (336)
142 KOG0511 Ankyrin repeat protein 98.1 5.7E-06 1.2E-10 80.2 7.1 75 381-456 37-111 (516)
143 KOG0511 Ankyrin repeat protein 98.1 9.7E-06 2.1E-10 78.6 8.6 85 478-565 37-121 (516)
144 KOG0520 Uncharacterized conser 98.1 5.3E-06 1.1E-10 91.3 6.6 68 498-565 629-702 (975)
145 KOG1418 Tandem pore domain K+ 98.0 4.7E-05 1E-09 81.6 12.9 55 107-161 116-170 (433)
146 KOG0520 Uncharacterized conser 98.0 1.4E-05 3.1E-10 88.0 7.4 128 371-499 565-702 (975)
147 KOG2384 Major histocompatibili 98.0 1.9E-05 4.1E-10 69.5 6.5 69 403-471 2-71 (223)
148 KOG0521 Putative GTPase activa 97.9 1.5E-05 3.2E-10 88.7 6.6 78 411-488 654-733 (785)
149 KOG3827 Inward rectifier K+ ch 97.8 0.00018 3.8E-09 70.9 10.3 100 49-161 65-169 (400)
150 KOG4404 Tandem pore domain K+ 97.7 0.00023 5E-09 68.3 9.1 56 106-161 186-249 (350)
151 KOG2968 Predicted esterase of 97.6 0.00025 5.4E-09 76.7 9.4 109 245-353 109-224 (1158)
152 KOG4404 Tandem pore domain K+ 97.5 6.5E-05 1.4E-09 72.0 2.4 52 106-157 80-131 (350)
153 KOG2505 Ankyrin repeat protein 97.1 0.00087 1.9E-08 67.9 6.2 73 488-563 402-480 (591)
154 PF04831 Popeye: Popeye protei 96.9 0.018 3.8E-07 49.6 11.7 105 238-347 14-125 (153)
155 PRK11832 putative DNA-binding 96.8 0.015 3.2E-07 53.7 10.7 96 243-342 14-110 (207)
156 smart00248 ANK ankyrin repeats 96.7 0.0026 5.5E-08 38.1 3.9 27 510-536 2-28 (30)
157 smart00248 ANK ankyrin repeats 96.4 0.0051 1.1E-07 36.7 3.8 27 413-439 2-28 (30)
158 KOG2505 Ankyrin repeat protein 96.3 0.0048 1E-07 62.8 4.7 64 391-454 402-471 (591)
159 PF03158 DUF249: Multigene fam 96.2 0.028 6E-07 50.1 8.5 44 514-563 147-190 (192)
160 PF06128 Shigella_OspC: Shigel 96.0 0.06 1.3E-06 49.4 9.4 113 450-568 157-279 (284)
161 PF06128 Shigella_OspC: Shigel 95.9 0.052 1.1E-06 49.7 8.8 120 383-536 156-280 (284)
162 PF03158 DUF249: Multigene fam 95.8 0.13 2.9E-06 45.8 10.8 137 381-531 47-191 (192)
163 KOG3542 cAMP-regulated guanine 95.7 0.026 5.5E-07 59.5 7.1 113 224-341 277-391 (1283)
164 PLN03223 Polycystin cation cha 94.8 0.71 1.5E-05 53.7 15.1 47 17-65 1299-1345(1634)
165 KOG1418 Tandem pore domain K+ 94.7 0.0071 1.5E-07 64.8 -0.6 47 106-152 242-296 (433)
166 KOG3542 cAMP-regulated guanine 93.6 0.1 2.2E-06 55.2 5.1 90 228-330 37-126 (1283)
167 KOG3193 K+ channel subunit [In 92.5 0.12 2.6E-06 53.3 3.7 52 107-158 218-269 (1087)
168 KOG2302 T-type voltage-gated C 92.3 2.6 5.5E-05 47.4 13.3 24 14-37 1220-1243(1956)
169 PF00520 Ion_trans: Ion transp 90.4 1.3 2.8E-05 41.2 8.3 130 17-154 60-194 (200)
170 KOG2301 Voltage-gated Ca2+ cha 90.1 3.9 8.5E-05 49.9 13.4 48 13-60 527-575 (1592)
171 KOG0498 K+-channel ERG and rel 88.7 46 0.00099 37.6 19.4 45 210-254 370-419 (727)
172 PF00060 Lig_chan: Ligand-gate 87.9 0.83 1.8E-05 40.4 4.7 57 104-161 42-98 (148)
173 PF11929 DUF3447: Domain of un 85.7 1.5 3.2E-05 33.7 4.4 17 417-433 10-26 (76)
174 PF11929 DUF3447: Domain of un 84.3 1.6 3.4E-05 33.6 4.0 48 381-435 7-54 (76)
175 KOG1053 Glutamate-gated NMDA-t 83.7 17 0.00038 40.8 12.6 47 111-159 616-662 (1258)
176 KOG4440 NMDA selective glutama 83.7 2.9 6.2E-05 44.5 6.6 98 52-161 571-668 (993)
177 KOG0501 K+-channel KCNQ [Inorg 79.4 87 0.0019 33.7 15.3 49 210-258 499-552 (971)
178 cd01615 CIDE_N CIDE_N domain, 76.9 7.3 0.00016 29.8 5.2 49 612-660 19-72 (78)
179 COG4709 Predicted membrane pro 73.9 24 0.00052 32.0 8.4 75 170-246 5-85 (195)
180 cd06537 CIDE_N_B CIDE_N domain 73.1 12 0.00025 28.8 5.3 49 612-660 19-71 (81)
181 cd06539 CIDE_N_A CIDE_N domain 71.8 12 0.00025 28.7 5.1 49 612-660 19-72 (78)
182 PF08016 PKD_channel: Polycyst 71.1 46 0.001 35.4 11.7 50 18-69 305-354 (425)
183 PLN03223 Polycystin cation cha 69.3 2.7E+02 0.0058 33.9 17.7 21 238-258 1499-1519(1634)
184 KOG2302 T-type voltage-gated C 68.6 10 0.00022 42.9 6.0 52 108-159 785-846 (1956)
185 PF07883 Cupin_2: Cupin domain 68.6 13 0.00028 27.7 5.0 66 254-328 3-69 (71)
186 smart00266 CAD Domains present 66.3 17 0.00037 27.5 5.0 49 612-660 17-70 (74)
187 KOG1052 Glutamate-gated kainat 66.1 26 0.00057 39.8 9.1 53 108-161 383-435 (656)
188 PHA01757 hypothetical protein 66.1 28 0.00062 26.2 6.0 48 130-177 4-51 (98)
189 KOG1054 Glutamate-gated AMPA-t 61.4 15 0.00033 39.1 5.4 52 107-159 596-647 (897)
190 KOG0500 Cyclic nucleotide-gate 60.8 2.3E+02 0.005 30.1 14.0 58 189-258 249-311 (536)
191 PLN03218 maturation of RBCL 1; 60.6 96 0.0021 37.3 12.5 169 383-560 585-774 (1060)
192 KOG3599 Ca2+-modulated nonsele 60.0 2.5E+02 0.0054 32.5 15.0 23 18-40 562-584 (798)
193 PLN03218 maturation of RBCL 1; 58.7 86 0.0019 37.7 11.6 10 385-394 480-489 (1060)
194 smart00835 Cupin_1 Cupin. This 57.6 24 0.00052 31.0 5.4 54 251-304 32-86 (146)
195 PF08006 DUF1700: Protein of u 57.5 66 0.0014 29.5 8.5 54 170-225 5-64 (181)
196 PF13314 DUF4083: Domain of un 57.5 67 0.0014 22.9 6.9 15 167-181 43-57 (58)
197 cd06536 CIDE_N_ICAD CIDE_N dom 57.5 29 0.00063 26.7 4.9 49 612-660 19-74 (80)
198 PLN03081 pentatricopeptide (PP 57.0 2.7E+02 0.0058 31.9 15.3 170 382-561 264-447 (697)
199 cd06535 CIDE_N_CAD CIDE_N doma 56.0 30 0.00064 26.4 4.7 49 612-660 19-71 (77)
200 PF02017 CIDE-N: CIDE-N domain 55.7 11 0.00024 28.9 2.4 48 613-660 20-72 (78)
201 PLN03081 pentatricopeptide (PP 54.3 2.5E+02 0.0055 32.1 14.5 15 173-187 143-157 (697)
202 KOG3713 Voltage-gated K+ chann 53.9 60 0.0013 34.3 8.2 47 15-61 306-352 (477)
203 KOG3300 NADH:ubiquinone oxidor 52.2 47 0.001 27.9 5.6 42 174-215 64-106 (146)
204 cd06538 CIDE_N_FSP27 CIDE_N do 51.7 42 0.00092 25.8 5.0 49 612-660 19-71 (79)
205 PRK09108 type III secretion sy 49.5 2.2E+02 0.0048 29.3 11.4 63 132-194 178-241 (353)
206 KOG2378 cAMP-regulated guanine 48.9 17 0.00036 37.5 3.2 44 299-342 1-45 (573)
207 KOG1709 Guanidinoacetate methy 46.1 17 0.00037 33.8 2.5 42 529-570 1-42 (271)
208 PF05899 Cupin_3: Protein of u 45.7 30 0.00066 26.2 3.6 29 270-303 26-54 (74)
209 PRK08156 type III secretion sy 45.7 2.8E+02 0.0061 28.6 11.5 60 135-194 174-234 (361)
210 TIGR00933 2a38 potassium uptak 44.6 70 0.0015 33.6 7.3 43 105-147 230-274 (390)
211 PRK12721 secretion system appa 44.5 2.9E+02 0.0063 28.4 11.4 62 133-194 177-239 (349)
212 KOG1545 Voltage-gated shaker-l 44.3 35 0.00075 34.3 4.5 49 12-60 325-373 (507)
213 PF10011 DUF2254: Predicted me 43.6 89 0.0019 32.5 7.8 58 104-161 98-155 (371)
214 KOG0513 Ca2+-independent phosp 43.3 6.2 0.00013 42.3 -0.8 116 445-572 105-222 (503)
215 PF14377 DUF4414: Domain of un 43.3 41 0.0009 27.8 4.3 42 183-224 52-105 (108)
216 PRK05702 flhB flagellar biosyn 42.6 3.3E+02 0.0071 28.2 11.5 63 132-194 183-246 (359)
217 KOG0513 Ca2+-independent phosp 42.4 1.3 2.9E-05 47.2 -5.8 99 436-543 126-226 (503)
218 TIGR00328 flhB flagellar biosy 42.0 3.5E+02 0.0075 27.9 11.5 62 133-194 177-239 (347)
219 COG1422 Predicted membrane pro 41.4 1E+02 0.0022 28.5 6.6 37 147-183 56-92 (201)
220 PRK13109 flhB flagellar biosyn 41.4 3.4E+02 0.0074 28.0 11.3 60 135-194 188-248 (358)
221 TIGR01404 FlhB_rel_III type II 38.8 4E+02 0.0088 27.3 11.4 61 135-195 178-239 (342)
222 COG4792 EscU Type III secretor 38.8 4E+02 0.0088 26.4 10.9 15 145-159 190-204 (349)
223 TIGR00933 2a38 potassium uptak 38.7 2.8E+02 0.006 29.1 10.7 47 106-152 128-180 (390)
224 KOG2301 Voltage-gated Ca2+ cha 37.2 1.8E+02 0.0038 36.5 9.8 30 119-148 1063-1092(1592)
225 KOG3614 Ca2+/Mg2+-permeable ca 37.0 2.8E+02 0.0061 33.5 10.8 62 128-189 1006-1075(1381)
226 PF08475 Baculo_VP91_N: Viral 36.7 57 0.0012 29.7 4.3 27 157-183 17-43 (183)
227 TIGR03037 anthran_nbaC 3-hydro 36.7 71 0.0015 28.5 4.8 62 263-332 43-104 (159)
228 PF08566 Pam17: Mitochondrial 35.8 1.5E+02 0.0033 26.7 6.7 56 133-188 75-134 (173)
229 PF08285 DPM3: Dolichol-phosph 35.7 2.3E+02 0.0049 22.6 8.5 73 108-185 14-90 (91)
230 PF07697 7TMR-HDED: 7TM-HD ext 35.5 38 0.00081 32.1 3.4 59 211-270 146-207 (222)
231 PF06212 GRIM-19: GRIM-19 prot 35.3 1.8E+02 0.0039 25.0 6.9 32 183-214 70-101 (130)
232 COG2981 CysZ Uncharacterized p 35.1 4.1E+02 0.0088 25.4 9.6 27 135-161 71-97 (250)
233 PRK13290 ectC L-ectoine syntha 34.3 1.4E+02 0.0031 25.4 6.3 69 252-329 38-106 (125)
234 PRK06298 type III secretion sy 34.3 5.2E+02 0.011 26.7 11.4 22 173-194 219-240 (356)
235 PLN03077 Protein ECB2; Provisi 33.9 8.4E+02 0.018 28.7 15.2 20 546-565 430-449 (857)
236 PHA02909 hypothetical protein; 33.5 1.2E+02 0.0025 21.2 4.4 24 50-73 38-61 (72)
237 PF02037 SAP: SAP domain; Int 32.9 1E+02 0.0022 19.4 3.8 26 171-196 5-35 (35)
238 PRK13264 3-hydroxyanthranilate 32.5 88 0.0019 28.4 4.8 59 267-332 52-110 (177)
239 PF03579 SHP: Small hydrophobi 32.4 1.8E+02 0.004 20.6 5.5 27 135-161 17-43 (64)
240 KOG0292 Vesicle coat complex C 32.3 86 0.0019 35.7 5.6 212 312-568 565-781 (1202)
241 PF02386 TrkH: Cation transpor 32.1 1.5E+02 0.0033 30.5 7.5 39 107-145 295-339 (354)
242 PF12597 DUF3767: Protein of u 31.2 83 0.0018 26.5 4.2 65 109-180 42-106 (118)
243 PRK04190 glucose-6-phosphate i 30.3 1.7E+02 0.0036 27.2 6.4 51 252-303 71-130 (191)
244 COG4858 Uncharacterized membra 29.8 4.4E+02 0.0095 24.1 9.5 98 34-150 111-208 (226)
245 PRK12772 bifunctional flagella 29.5 5.8E+02 0.013 28.6 11.7 61 135-195 442-503 (609)
246 KOG4591 Uncharacterized conser 29.2 44 0.00096 30.5 2.4 47 411-457 220-271 (280)
247 PRK12468 flhB flagellar biosyn 29.2 5.4E+02 0.012 26.9 10.6 58 137-194 188-246 (386)
248 TIGR00934 2a38euk potassium up 28.9 5.7E+02 0.012 29.5 11.2 34 38-71 438-472 (800)
249 COG0662 {ManC} Mannose-6-phosp 28.8 1.1E+02 0.0024 26.1 4.8 47 250-302 37-84 (127)
250 PRK11677 hypothetical protein; 28.8 3E+02 0.0065 23.8 7.2 9 189-197 49-57 (134)
251 PF07527 Hairy_orange: Hairy O 28.4 1.8E+02 0.0039 19.2 4.7 34 167-200 6-40 (43)
252 COG1615 Uncharacterized conser 28.0 56 0.0012 36.2 3.3 36 117-152 221-256 (885)
253 PLN03077 Protein ECB2; Provisi 27.6 1.1E+03 0.023 27.9 15.1 179 381-569 226-422 (857)
254 smart00511 ORANGE Orange domai 27.4 1.9E+02 0.0042 19.3 4.9 35 166-200 5-40 (45)
255 PF11151 DUF2929: Protein of u 27.4 41 0.00088 24.1 1.5 18 106-123 2-19 (57)
256 PF13128 DUF3954: Protein of u 26.6 1.3E+02 0.0029 20.8 3.7 15 270-284 10-24 (50)
257 PF14377 DUF4414: Domain of un 26.1 1.6E+02 0.0035 24.3 5.1 46 183-228 8-68 (108)
258 COG1917 Uncharacterized conser 26.0 1.3E+02 0.0027 25.7 4.7 49 251-305 45-94 (131)
259 PF03607 DCX: Doublecortin; I 25.3 98 0.0021 22.3 3.3 47 614-661 9-56 (60)
260 COG4325 Predicted membrane pro 25.3 3.9E+02 0.0083 27.6 8.2 57 103-161 129-190 (464)
261 TIGR00934 2a38euk potassium up 25.2 1.7E+02 0.0038 33.4 6.5 47 100-147 614-662 (800)
262 PRK13700 conjugal transfer pro 25.1 9.9E+02 0.022 27.4 12.2 20 383-402 303-322 (732)
263 PF01529 zf-DHHC: DHHC palmito 25.0 5E+02 0.011 23.2 9.4 21 141-161 144-164 (174)
264 PRK11171 hypothetical protein; 24.4 1.8E+02 0.0039 28.6 6.0 70 252-330 64-135 (266)
265 smart00805 AGTRAP Angiotensin 24.4 3E+02 0.0066 24.2 6.4 40 57-117 10-49 (159)
266 PF04053 Coatomer_WDAD: Coatom 23.5 1.7E+02 0.0036 31.4 5.9 203 304-533 223-429 (443)
267 TIGR00769 AAA ADP/ATP carrier 23.5 9.6E+02 0.021 25.9 15.1 33 103-142 140-173 (472)
268 PF13623 SurA_N_2: SurA N-term 23.3 5.1E+02 0.011 22.7 8.7 43 138-180 10-66 (145)
269 TIGR03404 bicupin_oxalic bicup 23.1 1.4E+02 0.0031 30.9 5.2 52 251-303 247-299 (367)
270 TIGR03404 bicupin_oxalic bicup 23.1 1.4E+02 0.0031 30.9 5.2 52 251-303 69-120 (367)
271 PF00190 Cupin_1: Cupin; Inte 22.6 1.4E+02 0.003 26.1 4.4 52 253-304 38-95 (144)
272 cd07070 NR_LBD_SF-1 The ligand 22.1 2.9E+02 0.0063 26.6 6.8 68 184-253 14-81 (237)
273 PHA03239 envelope glycoprotein 21.6 9.8E+02 0.021 25.3 11.0 22 51-72 262-283 (429)
274 KOG3836 HLH transcription fact 21.6 28 0.00061 37.6 -0.3 60 517-576 403-462 (605)
275 COG1226 Kch Kef-type K+ transp 21.4 52 0.0011 30.3 1.5 41 108-148 119-159 (212)
276 COG5559 Uncharacterized conser 21.3 1.1E+02 0.0025 21.7 2.7 23 181-203 8-30 (65)
277 KOG1277 Endosomal membrane pro 21.3 7.1E+02 0.015 26.5 9.3 44 60-116 500-543 (593)
278 COG3718 IolB Uncharacterized e 21.1 2.6E+02 0.0057 26.5 5.8 66 251-330 31-109 (270)
279 PRK10750 potassium transporter 20.8 1E+03 0.022 25.8 11.2 94 22-144 354-465 (483)
280 PRK05482 potassium-transportin 20.7 1.7E+02 0.0036 32.1 5.1 43 102-144 324-368 (559)
281 PF02285 COX8: Cytochrome oxid 20.6 2.6E+02 0.0057 18.8 4.1 30 128-157 9-39 (44)
282 KOG4591 Uncharacterized conser 20.5 74 0.0016 29.1 2.1 42 511-552 223-269 (280)
283 PHA03048 IMV membrane protein; 20.4 4.3E+02 0.0094 20.8 7.0 15 60-74 20-34 (93)
284 PF06295 DUF1043: Protein of u 20.3 5.5E+02 0.012 21.9 7.6 27 166-198 28-54 (128)
285 COG3837 Uncharacterized conser 20.2 1.4E+02 0.0031 26.3 3.7 39 262-306 57-95 (161)
No 1
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=100.00 E-value=6.5e-98 Score=847.46 Aligned_cols=651 Identities=32% Similarity=0.561 Sum_probs=561.9
Q ss_pred CchhHHHHh-hCc---chhhHHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 006072 1 MPWDLIYKA-SGR---KEAVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLP 76 (662)
Q Consensus 1 ~P~~~i~~~-~~~---~~~~~~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~ 76 (662)
+||+++... .+. ...+++++++|++|+.|+.+++.++++....++.+.+++++++.+++++||+||+||+++...+
T Consensus 149 lP~~~i~~~~~~~~~~~~~~~~l~llrl~Rl~ri~~~~~~le~~~~~~~~~~~~~kli~~~l~~~H~~aC~~y~i~~~~~ 228 (823)
T PLN03192 149 IPFQALAYLITGTVKLNLSYSLLGLLRFWRLRRVKQLFTRLEKDIRFSYFWIRCARLLSVTLFLVHCAGCLYYLIADRYP 228 (823)
T ss_pred hHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 688887432 222 2356788999999999999999999998888888889999999999999999999999996543
Q ss_pred CCCCCceEEeeccCCCCCcchhhccchHHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 77 PEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMT 156 (662)
Q Consensus 77 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~ 156 (662)
. .+.+|+.. .+.++.+.++|.+|+.|+||+++|||||||||++|.|..|++|++++|++|+++|||++|+++
T Consensus 229 ~--~~~~Wi~~------~~~~~~~~s~~~~Yi~slYwai~TmtTVGYGDi~p~t~~E~i~~i~~ml~g~~~~a~~ig~i~ 300 (823)
T PLN03192 229 H--QGKTWIGA------VIPNFRETSLWIRYISAIYWSITTMTTVGYGDLHAVNTIEMIFIIFYMLFNLGLTAYLIGNMT 300 (823)
T ss_pred C--CCCchHHH------hhhccccCcHHHHHHHHHHHHHHHHhhccCCCcCCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 34588764 124456778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHhh-hccHhHHHhhchHHHHHHHHHHHHHHHhcccc
Q 006072 157 ALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGHLRLQYES-SYTEASVLQDIPISIRAKISQTLYLPYIEKVP 234 (662)
Q Consensus 157 ~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~~~~~~~~~-~~~~~~~l~~Lp~~L~~~i~~~~~~~~l~~~~ 234 (662)
.++.+ +.++++|+++++.+++||+++++|+.||+||++|++++|+. +.+++++++.||++||.++..+++.+.+++++
T Consensus 301 ~li~~~~~~~~~f~~~~~~~~~ym~~~~lp~~lq~ri~~y~~~~~~~~~~~~~~~l~~Lp~~Lr~~i~~~l~~~~l~~~~ 380 (823)
T PLN03192 301 NLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKDQILAYMCLRFKAESLNQQQLIDQLPKSICKSICQHLFLPVVEKVY 380 (823)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccccHHHHHHHcCHHHHHHHHHHHHHHHHhhCc
Confidence 99988 66778999999999999999999999999999999999975 47788999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCc
Q 006072 235 LFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQ 314 (662)
Q Consensus 235 ~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~ 314 (662)
+|++++++++.+|+..++++.|+|||.|+.+||.++++|||.+|.|+++. ..++++.++..+++|++|||.+++.+.|+
T Consensus 381 lF~~~s~~~l~~L~~~~~~~~~~pge~I~~qge~~~~lY~I~~G~V~i~~-~~~~~e~~l~~l~~Gd~FGE~~~l~~~p~ 459 (823)
T PLN03192 381 LFKGVSREILLLLVTKMKAEYIPPREDVIMQNEAPDDVYIVVSGEVEIID-SEGEKERVVGTLGCGDIFGEVGALCCRPQ 459 (823)
T ss_pred chhcCCHHHHHHHHHhhheeeeCCCCEEEECCCCCceEEEEEecEEEEEE-ecCCcceeeEEccCCCEecchHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999985 45667888999999999999999999999
Q ss_pred cceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHHHHhcCCcchhh--hhhhcCccccccchhhhhhhhhHhHHhccCC
Q 006072 315 PYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQGKESDLR--LKQLQSDITFHISKHEAELALKVNSAAYHGD 392 (662)
Q Consensus 315 ~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~~~~~~~~--~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~ 392 (662)
+++++|.+.|+++.+++++|.++++.+|+++..++.++.+....... ...+..+. .....+.++.++|+.||..|+
T Consensus 460 ~~t~ra~~~s~ll~l~~~~f~~ll~~~p~d~~~i~~~~l~~~~~l~~l~v~~ll~~~--~~~~~~~~~~~~L~~Aa~~g~ 537 (823)
T PLN03192 460 SFTFRTKTLSQLLRLKTSTLIEAMQTRQEDNVVILKNFLQHHKELHDLNVGDLLGDN--GGEHDDPNMASNLLTVASTGN 537 (823)
T ss_pred CCeEEEcccEEEEEEEHHHHHHHHHHhhHHHHHHHHHHHHHhhhhccccHHHHHhhc--ccccCCccchhHHHHHHHcCC
Confidence 99999999999999999999999999999999999998874322111 01111111 112344567899999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCC
Q 006072 393 LYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASL 472 (662)
Q Consensus 393 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 472 (662)
.++++.|++.|+++|..|..|.||||+||..|+.+++++|+++|+++|.+|.+|.||||+|+..|+.+++++|++.++..
T Consensus 538 ~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~ 617 (823)
T PLN03192 538 AALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASIS 617 (823)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCC-CChHHHHH
Q 006072 473 NVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWG-NTPLDEGR 551 (662)
Q Consensus 473 ~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g-~tpl~~A~ 551 (662)
+..++.++||.|+.+|+.++++.|+++|+++|.+|.+|.||||+|+..|+.+++++|+++|||++..|..| .||++++.
T Consensus 618 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~ 697 (823)
T PLN03192 618 DPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRE 697 (823)
T ss_pred CcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999888 99999886
Q ss_pred HcCCHHHHHH--HHhcccccccc--C-----CCCCccccccCCCCCcccccCCCCCCccc--ccccceEEEcCCcHHHHH
Q 006072 552 MCGNKNLIKL--LEDAKSTQLLE--F-----PHGFQDTADKRNPTRKCTVFPFHPWDAKE--SRRHGIVLWIPQNIKDLI 620 (662)
Q Consensus 552 ~~~~~~iv~~--Ll~~ga~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~el~ 620 (662)
.....+...- +.+..+..... . +.............++..+++.||..+++ .+..+.+.|+|++++|+.
T Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~g~~~~~~~~~~e~~ 777 (823)
T PLN03192 698 LLQKRELGHSITIVDSVPADEPDLGRDGGSRPGRLQGTSSDNQCRPRVSIYKGHPLLRNERCCNEAGKLINLPPSLEELK 777 (823)
T ss_pred HHHHhhhCceeeeccCCCccccccccccccccccccccccccccCceEEEecCCCcccccccccccCeEEeCCccHHHHH
Confidence 6554432111 11111111000 0 00011111223333567889999987777 458999999999999999
Q ss_pred HHHHhHcCCCCCcc-cccCCCceeeeeeeeecCCeEEEeecCC
Q 006072 621 KTAAEQLDFRGGDC-ILSSEGGKILDVDMINDDQKLYLIQETH 662 (662)
Q Consensus 621 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 662 (662)
+.++++++++.... +.+++|+++++++++|||||||+++++|
T Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (823)
T PLN03192 778 AIAGEKLGFDARKAMVTNEEGAEIDSIEVIRDNDKLFVVEDED 820 (823)
T ss_pred HHHHHHhCCCcccceeecCCCceeeeeEEEecCCEEEEeeccc
Confidence 99999999766544 4577899999999999999999999986
No 2
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-63 Score=524.71 Aligned_cols=444 Identities=34% Similarity=0.549 Sum_probs=360.1
Q ss_pred CchhHHHHhhC---------cchhhHHHHHHHHHHHHhHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 1 MPWDLIYKASG---------RKEAVRYLLWIRLYRVRKVSQFFHKMEKDIRINY--MFSRIVKLIAVELYCSHIAACIFY 69 (662)
Q Consensus 1 ~P~~~i~~~~~---------~~~~~~~lrl~rllRl~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~H~~aC~~~ 69 (662)
+||++|+.... ...+..++.+.||+|+.|+.+++.++++.....+ .+.-+.++++.+++.+||+||+||
T Consensus 174 lP~~~i~~~~~~~~~~~~~~~~~l~~il~~~rL~Rl~Rv~~l~~r~~k~~~~v~~~awa~~a~ll~~~~l~sH~~gc~wY 253 (727)
T KOG0498|consen 174 LPFDQIVVLVVIGSTSLALESTILVGILLLQRLPRLRRVIPLFARLEKDTGFVYETAWAGAALLLSVYLLASHWAGCIWY 253 (727)
T ss_pred cChhhheeeeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999977433 2247788889999999999999999999877776 222377899999999999999999
Q ss_pred HHHhcCCCCCCCc-eEEeeccCCCCCcch----hhccchHHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHH
Q 006072 70 YLATTLPPEQEGY-TWIGSLKMGDYSYAD----FREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFD 144 (662)
Q Consensus 70 ~i~~~~~~~~~~~-~w~~~~~~~~~~~~~----~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g 144 (662)
+++...+...... +|+..... .....+ +...+++.+|++|+||+++||||||||+++|.+..|++|+|++|++|
T Consensus 254 lia~~~~~~~~~~~tw~~~l~~-~~~~~~~~~~fg~~s~~~kY~~aLyw~l~tLstvG~g~~~s~~~~E~iFsi~~mi~G 332 (727)
T KOG0498|consen 254 LIAIERPASCPRKATWLGSLGR-LLSCYNLSFTFGIYSLALKYVYALYWGLSTLSTVGYGLVHANNMGEKIFSIFIMLFG 332 (727)
T ss_pred HHHhcccccCcccccccccccc-ccccCcccccccchhHHHHHHHHHHHHhhHhhhccCCccCCCCcHHHHHHHHHHHHh
Confidence 9998877555555 99886543 333333 67788899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHhh--hccHhHHHhhchHHHHHHH
Q 006072 145 MILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGHLRLQYES--SYTEASVLQDIPISIRAKI 221 (662)
Q Consensus 145 ~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~~~~~~~~~--~~~~~~~l~~Lp~~L~~~i 221 (662)
.++||++||+|+.++++ .++.++|+.++.++++||+++++|++||+||++|++|+|.. +.++++++++||+.||.+|
T Consensus 333 llL~A~lIGNmt~~iqs~tsR~~~~r~k~rd~e~~m~~~~LP~~LRqRi~~y~q~kw~~t~Gvdee~lL~~LP~~LR~dI 412 (727)
T KOG0498|consen 333 LLLFAYLIGNMTALLQSLTSRTEEMRDKMRDAEQWMSRRQLPPDLRQRIRRYEQYKWLATRGVDEEELLQSLPKDLRRDI 412 (727)
T ss_pred HHHHHHHHhhHHHhHHHHhHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhccCcCHHHHHHhCCHHHHHHH
Confidence 99999999999999999 78899999999999999999999999999999999999975 6899999999999999999
Q ss_pred HHHHHHHHhcccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCc
Q 006072 222 SQTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNS 301 (662)
Q Consensus 222 ~~~~~~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~ 301 (662)
+.+++.++++++|+|+++|++++.+|+.++++..|+|||+|++|||..++||||++|.+++... .+|.......+++||
T Consensus 413 ~~hL~~~lv~~vpLF~~md~~~L~al~~rlk~~~f~pge~iireGd~v~~myFI~rG~le~~~~-~~g~~~~~~~L~~Gd 491 (727)
T KOG0498|consen 413 KRHLCLDLVRKVPLFAGMDDGLLDALCSRLKPEYFTPGEYIIREGDPVTDMYFIVRGSLESITT-DGGGFFVVAILGPGD 491 (727)
T ss_pred HHHHhHHHHhhCchhhcCCHHHHHHHHHHhhhhccCCCCeEEecCCccceeEEEEeeeEEEEEc-cCCceEEEEEecCCC
Confidence 9999999999999999999999999999999999999999999999999999999999998874 445667788999999
Q ss_pred ccc-chhhhcc-CCccceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHHH---HhcCCcchhhhhhhcCccccccchh
Q 006072 302 SFG-EVSILCN-IPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTN---LLQGKESDLRLKQLQSDITFHISKH 376 (662)
Q Consensus 302 ~fG-e~~~l~~-~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~---l~~~~~~~~~~~~l~~d~~~~~~~~ 376 (662)
+|| |...... .|++.||+|++.|+++.|++++|.++++.++.++.+++.+ ........-..+....+-.-+..++
T Consensus 492 ~~GeEl~~~~~~~p~t~TVralt~~el~~L~~~dL~~V~~~f~~~~~~~l~~~~r~~s~~~r~~aa~~iq~a~r~~~~~~ 571 (727)
T KOG0498|consen 492 FFGEELLTWCLDLPQTRTVRALTYCELFRLSADDLKEVLQQFRRLGSKFLQHTFRYYSHLWRTWAACFIQAAWRRHIKRK 571 (727)
T ss_pred ccchHHHHHHhcCCCCceeehhhhhhHHhccHHHHHHHHHHhHHHHHHHHHhHHHHhhhhhhhhhhhhHHHHHHHHHHhh
Confidence 999 7777777 8999999999999999999999999999999999999984 3332222111111111111000000
Q ss_pred -hhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCC
Q 006072 377 -EAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFG 446 (662)
Q Consensus 377 -~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 446 (662)
..+.......+...++..-....+..+..++..+.+|.+++|.++..|..++...+++++++++..+..+
T Consensus 572 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~f~~~~~ 642 (727)
T KOG0498|consen 572 GEEELALEEEESAIRGDDRGSKSLLRAGILASRFAANGRPPLHTAASRGSSDCALLLLQKPADPDFSDAEG 642 (727)
T ss_pred ccchhhhhcchhhhccccccchhhhhcccccccccccCCCccccccccCccccccccCCCCCCCCcccccc
Confidence 0000000112222333333444555666677777777788887777777777777777777777766555
No 3
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-53 Score=414.70 Aligned_cols=339 Identities=23% Similarity=0.448 Sum_probs=298.5
Q ss_pred CchhHHHHhhCcchhhHHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 006072 1 MPWDLIYKASGRKEAVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQE 80 (662)
Q Consensus 1 ~P~~~i~~~~~~~~~~~~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~~ 80 (662)
+|+|+++...++....| +.||+|+.|+..++.+-+....... +.++.+++.+.++++||.||+||+|+.......+
T Consensus 85 iP~D~l~~~~~~~~~~r---~nRllk~yRl~~F~~rTetrT~~Pn-~fri~~lv~~~~ilfHWNaClYf~iS~~~g~~~d 160 (536)
T KOG0500|consen 85 IPLDLLLFKDGSASLER---LNRLLKIYRLFEFFDRTETRTTYPN-AFRISKLVHYCLILFHWNACLYFLISKAIGFTTD 160 (536)
T ss_pred cchhHHhhcCCcchHHH---HHHHHHHHHHHHHHHHhccccCCch-HHHHHHHHHHHHHHHHHhhHHHHhhhHhcCcccc
Confidence 69999998888766555 6666667777788888777666554 4489999999999999999999999976544333
Q ss_pred CceEEeeccCCCCCcchhhccchHHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 81 GYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIV 160 (662)
Q Consensus 81 ~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~ 160 (662)
+|.-.. ..+..+..+...++.++|+.|+||+..||||+| -...|.+..|++|.|+-.++|+++||.++|++++++.
T Consensus 161 --~wvY~~-i~d~~~~~c~~~n~~ReY~~S~YWStLTlTTiG-e~P~P~t~~ey~F~I~d~LiGvliFAtIvG~VGsmVt 236 (536)
T KOG0500|consen 161 --DWVYPK-INDPEFATCDAGNLTREYLYSLYWSTLTLTTIG-EQPPPVTSSEYAFVIVDTLIGVLIFATIVGNVGSMVT 236 (536)
T ss_pred --ccccCC-ccCccccccchhHHHHHHHHHHHHHhhhhhhcc-CCCCCCcCchhhHHHHHHHHHHHHHhhhhccHhHHHH
Confidence 365432 333344455556788999999999999999998 6678999999999999999999999999999999999
Q ss_pred c-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHhhh--ccHhHHHhhchHHHHHHHHHHHHHHHhccccccc
Q 006072 161 K-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGHLRLQYESS--YTEASVLQDIPISIRAKISQTLYLPYIEKVPLFK 237 (662)
Q Consensus 161 ~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~~~~~~~~~~--~~~~~~l~~Lp~~L~~~i~~~~~~~~l~~~~~f~ 237 (662)
+ +....+||++|+.++.||+.+++|..+|.||.+||.|.|.++ .+|+++++.||+.|+.+|+.+++.+.++++++|+
T Consensus 237 nmna~r~EFq~~mDGiK~YM~~RkV~~~lq~rVikwfdYlwa~~~~~DEeevl~~LP~kL~aeIA~nvh~dTLkkV~iF~ 316 (536)
T KOG0500|consen 237 NMNAARTEFQAKMDGIKQYMRYRKVPKALQTRVIKWFDYLWAHKKIVDEEEVLKLLPDKLKAEIAINVHLDTLKKVRIFQ 316 (536)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhccccccHHHHHHhCCHHHHhHhHHHHHHHHHHhhhHHH
Confidence 9 667789999999999999999999999999999999999766 6899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhc------c
Q 006072 238 GCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILC------N 311 (662)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~------~ 311 (662)
++.+.++.+|+.+++++.|.|||+|+++||.+.+||+|.+|.++++. ++|. .....+++|++|||.+++. +
T Consensus 317 ~ce~~lL~elVLklk~qvfSPgDyICrKGdvgkEMyIVk~G~L~Vv~--dDg~-t~~~~L~~G~~FGEisIlni~g~~~g 393 (536)
T KOG0500|consen 317 DCEAGLLVELVLKLKPQVFSPGDYICRKGDVGKEMYIVKEGKLAVVA--DDGV-TVFVTLKAGSVFGEISILNIKGNKNG 393 (536)
T ss_pred hcchhHHHHHHHHhcceeeCCCCeEEecCcccceEEEEEccEEEEEe--cCCc-EEEEEecCCceeeeeEEEEEcCcccC
Confidence 99999999999999999999999999999999999999999999875 3333 3567799999999999887 5
Q ss_pred CCccceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHH
Q 006072 312 IPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLT 350 (662)
Q Consensus 312 ~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~ 350 (662)
..|++++++...+++++++++|+-+.++.||+....++.
T Consensus 394 NRRtanvrSvGYSDlfvLskdDl~~aL~eYP~a~~~L~~ 432 (536)
T KOG0500|consen 394 NRRTANVRSVGYSDLFVLSKDDLWEALSEYPDARKRLEE 432 (536)
T ss_pred CcceeeeeeeccceeeEeeHHHHHHHHHhCCHHHHHHHH
Confidence 679999999999999999999999999999998888773
No 4
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-45 Score=361.24 Aligned_cols=327 Identities=24% Similarity=0.457 Sum_probs=291.7
Q ss_pred CchhHHHHhhCcchhhHHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 006072 1 MPWDLIYKASGRKEAVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQE 80 (662)
Q Consensus 1 ~P~~~i~~~~~~~~~~~~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~~ 80 (662)
+|+|++|...|...++ |+.|+|++--++.++..++..+...+ ++|+++.+.++++++|+.||+||+.+.+..- .
T Consensus 318 LPldllY~~~G~~p~w---R~~R~lK~~sF~e~~~~Le~i~s~~y-~~RV~rT~~YmlyilHinacvYY~~Sayqgl--G 391 (815)
T KOG0499|consen 318 LPLDLLYLFFGFNPMW---RANRMLKYTSFFEFNHHLESIMSKAY-IYRVIRTTGYLLYILHINACVYYWASAYQGL--G 391 (815)
T ss_pred hhHHHHHHHhccchhh---hhhhHHHHHHHHHHHHHHHHHhcchh-hhhhHHHHHHHHHHHhhhHHHHHHHHhhccc--c
Confidence 6999999999976555 67777777777777777776666554 5699999999999999999999999876443 3
Q ss_pred CceEEeeccCCCCCcchhhccchHHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 81 GYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIV 160 (662)
Q Consensus 81 ~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~ 160 (662)
.+.|+-+.. ...|++|||||+.|++|+| |.-.|+|..|++|..+.-+.|+++|+.+||.|-.++.
T Consensus 392 ~~rWVydg~--------------Gn~YiRCyyfa~kt~~tiG-~~P~P~~~~E~Vf~~~~w~mGVFvFslliGQmRDvi~ 456 (815)
T KOG0499|consen 392 TTRWVYDGE--------------GNEYIRCYYFAVKTLITIG-GLPEPQTLFEIVFQLLNWFMGVFVFSLLIGQMRDVIG 456 (815)
T ss_pred cceeEEcCC--------------CCceeeehhhHHHHHHHhc-CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467864311 1359999999999999999 9999999999999999999999999999999999999
Q ss_pred c-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHhhh--ccHhHHHhhchHHHHHHHHHHHHHHHhccccccc
Q 006072 161 K-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGHLRLQYESS--YTEASVLQDIPISIRAKISQTLYLPYIEKVPLFK 237 (662)
Q Consensus 161 ~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~~~~~~~~~~--~~~~~~l~~Lp~~L~~~i~~~~~~~~l~~~~~f~ 237 (662)
. +..++.||..|+....||++.++|+..|+||+.+|+|.|+++ .+|.++++.||..|+.+++...+..++.++.+|+
T Consensus 457 aAt~nq~~fr~~mD~tl~ym~~~~i~kevqnRVr~WyeyTW~sQr~LDEs~ll~~LP~klq~dlAi~V~y~~lSKVqLFq 536 (815)
T KOG0499|consen 457 AATANQNYFRACMDDTLAYMNNYSIPKEVQNRVRTWYEYTWDSQRMLDESDLLKTLPTKLQLDLAIDVNYSILSKVQLFQ 536 (815)
T ss_pred hhhccHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHhhhhhhccccHHHHHHhcchhheeeeeEEeehhhhhHHHHhh
Confidence 9 677888999999999999999999999999999999999877 6899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhc---cCCc
Q 006072 238 GCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILC---NIPQ 314 (662)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~---~~~~ 314 (662)
+++.+.+..++.+++...|.|||+|+++||.+.+||+|..|.|++.. . .....++.++++|++|||++++. +..|
T Consensus 537 ~Cdr~mirDmllrLRsV~yLPgDfVCkKGeiGkEMYIIk~GqvQVlG-G-p~~~~Vl~tL~~GsVFGEISLLaigG~nRR 614 (815)
T KOG0499|consen 537 GCDRQMIRDMLLRLRSVLYLPGDFVCKKGEIGKEMYIIKHGQVQVLG-G-PDGTKVLVTLKAGSVFGEISLLAIGGGNRR 614 (815)
T ss_pred hhHHHHHHHHHHHhhceeecCCceeeecccccceeEEeecceEEEec-C-CCCCEEEEEecccceeeeeeeeeecCCCcc
Confidence 99999999999999999999999999999999999999999999986 3 33456788899999999999887 5679
Q ss_pred cceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHH
Q 006072 315 PYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLT 350 (662)
Q Consensus 315 ~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~ 350 (662)
+++++|.++|.++++++.++.+++..||..-..+.+
T Consensus 615 TAnV~a~Gf~nLfvL~KkdLneil~~YP~sq~iLrk 650 (815)
T KOG0499|consen 615 TANVVAHGFANLFVLDKKDLNEILVHYPDSQRILRK 650 (815)
T ss_pred chhhhhcccceeeEecHhHHHHHHHhCccHHHHHHH
Confidence 999999999999999999999999999976655544
No 5
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-45 Score=361.33 Aligned_cols=344 Identities=21% Similarity=0.377 Sum_probs=293.6
Q ss_pred CchhHHHHhhCcch----hhHHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 006072 1 MPWDLIYKASGRKE----AVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLP 76 (662)
Q Consensus 1 ~P~~~i~~~~~~~~----~~~~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~ 76 (662)
+|||+|..+....+ ++.-++.+||+|+-|+.|.++++- .|....++-+++.+.+.+||+||+||.|+.++-
T Consensus 305 LPYDi~naF~~~degI~SLFSaLKVVRLLRLGRVaRKLD~Yl-----EYGAA~LvLLlC~y~lvAHWlACiWysIGd~ev 379 (971)
T KOG0501|consen 305 LPYDIFNAFERDDEGIGSLFSALKVVRLLRLGRVARKLDHYL-----EYGAAVLVLLLCVYGLVAHWLACIWYSIGDYEV 379 (971)
T ss_pred ccHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHHhheeccchhe
Confidence 69999988776543 455566777777777777666653 335556778888889999999999999997643
Q ss_pred CCC-----CCceEEeeccCCC---CCcch------hhccchHHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHH
Q 006072 77 PEQ-----EGYTWIGSLKMGD---YSYAD------FREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVS 142 (662)
Q Consensus 77 ~~~-----~~~~w~~~~~~~~---~~~~~------~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~ 142 (662)
.+. ...+|+.....+. |+|.. ...++.-..|+.|+||+++.|||||||+|.|.|..|++|++++|+
T Consensus 380 ~~~~~n~i~~dsWL~kLa~~~~tpY~~~~s~~~~~~gGPSr~S~YissLYfTMt~mttvGFGNiA~~TD~EKiF~v~mMi 459 (971)
T KOG0501|consen 380 RDEMDNTIQPDSWLWKLANDIGTPYNYNLSNKGTLVGGPSRTSAYISSLYFTMTCMTTVGFGNIAPNTDNEKIFGVCMMI 459 (971)
T ss_pred ecccccccccchHHHHHHhhcCCCceeccCCCceeecCCcccceehhhhhhhhhhhhcccccccCCCccHHHHHHHHHHH
Confidence 221 1236766555432 22221 233455578999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHh--hhccHhHHHhhchHHHHH
Q 006072 143 FDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGHLRLQYE--SSYTEASVLQDIPISIRA 219 (662)
Q Consensus 143 ~g~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~~~~~~~~--~~~~~~~~l~~Lp~~L~~ 219 (662)
+|.++||-++|+++.|+++ .+.+.+|++.++.+.+||+-.++|+.|.+||.+|.--.|. ++.+..++|.-.|+.+|.
T Consensus 460 i~aLLYAtIFG~vTTI~QQM~s~T~rYHeMlnnVReFlKL~evPK~LsERVMDYvVSTWaMtkGiDTeKVL~~CPKDMkA 539 (971)
T KOG0501|consen 460 IGALLYATIFGHVTTIIQQMTSNTNRYHEMLNNVREFLKLYEVPKGLSERVMDYVVSTWAMTKGIDTEKVLGYCPKDMKA 539 (971)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhhhcCcCHHHHhhhCcccccc
Confidence 9999999999999999999 6788999999999999999999999999999999999884 568889999999999999
Q ss_pred HHHHHHHHHHhcccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCC
Q 006072 220 KISQTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHP 299 (662)
Q Consensus 220 ~i~~~~~~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~ 299 (662)
+|..++..+.+..+|-|+-.|+.+++.|+..++..+..|||.|++.|+..|.++||++|++++.+ ...++..+++
T Consensus 540 DICVHLNRKVFnEHpaFRLASDGCLRaLAm~f~~~H~APGDLlYHtGESvDaLcFvVsGSLEVIQ-----DDEVVAILGK 614 (971)
T KOG0501|consen 540 DICVHLNRKVFNEHPAFRLASDGCLRALAMEFQTNHCAPGDLLYHTGESVDALCFVVSGSLEVIQ-----DDEVVAILGK 614 (971)
T ss_pred ceeeecchhhhccCcceeeccchhHHHHHHHHHhccCCCcceeeecCCccceEEEEEecceEEee-----cCcEEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999987 2346899999
Q ss_pred Cccccchhhhcc--CCccceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHHHHhc
Q 006072 300 NSSFGEVSILCN--IPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQ 354 (662)
Q Consensus 300 G~~fGe~~~l~~--~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~ 354 (662)
||+||+.-.=.+ ..+.++++|+++|++..|.++.+.++++.|..+.+.+-+++.-
T Consensus 615 GDVFGD~FWK~~t~~qs~ANVRALTYcDLH~IKrd~Ll~VLdFYtAFanSFaRNl~L 671 (971)
T KOG0501|consen 615 GDVFGDEFWKENTLGQSAANVRALTYCDLHMIKRDKLLKVLDFYTAFANSFARNLTL 671 (971)
T ss_pred CccchhHHhhhhhhhhhhhhhhhhhhhhhhHHhHHHHHHHHHHHHHHHHHhhhceee
Confidence 999998543332 3467899999999999999999999999999999988887654
No 6
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.7e-37 Score=259.56 Aligned_cols=176 Identities=32% Similarity=0.393 Sum_probs=145.4
Q ss_pred hhhhhhhhhHhHHhccCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhc-CCCCcccCCCCCcHHHH
Q 006072 375 KHEAELALKVNSAAYHGDLYQLEGLIR-AGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQK-GVDINLKDNFGNTPLLE 452 (662)
Q Consensus 375 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 452 (662)
+.|.++.||||+||..|+.+++.+|++ .+..+|.+|..||||||.||..|+.++|+.|+.+ |+|+|..+..|.||||+
T Consensus 33 r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHy 112 (226)
T KOG4412|consen 33 RDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHY 112 (226)
T ss_pred cccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehh
Confidence 444577888888888888888888884 4677788888888888888888888888888887 88888888888888888
Q ss_pred HHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHH
Q 006072 453 AIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLV 530 (662)
Q Consensus 453 A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 530 (662)
|+..|+.+++++|+++|+.++.++ +.||||-|+.-|+.+++++|+..|+.+|.+|+.|+||||.|...|+.++..+|+
T Consensus 113 AagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV 192 (226)
T KOG4412|consen 113 AAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLV 192 (226)
T ss_pred hhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHH
Confidence 888888888888888888877765 678888888888888888888888888888888888888887778888888888
Q ss_pred HCCCCCCCCCCCCCChHHHHH
Q 006072 531 EAGASVFPKDRWGNTPLDEGR 551 (662)
Q Consensus 531 ~~ga~~~~~d~~g~tpl~~A~ 551 (662)
++|||++..|+.| ||+..|+
T Consensus 193 ~~gAd~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 193 RAGADTDREDKEG-TALRIAC 212 (226)
T ss_pred HhccceeeccccC-chHHHHH
Confidence 8888888888877 8876665
No 7
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.2e-37 Score=259.41 Aligned_cols=197 Identities=31% Similarity=0.409 Sum_probs=183.9
Q ss_pred hhhhHhHHhccCCHHHHHHHHHcCC-CCCCCCC-CCCcHHHHHHHcCcHHHHHHHH-hcCCCCcccCCCCCcHHHHHHHh
Q 006072 380 LALKVNSAAYHGDLYQLEGLIRAGA-DPNRTDY-DGRSPLHLAASRGYEEIMTFLI-QKGVDINLKDNFGNTPLLEAIKY 456 (662)
Q Consensus 380 ~~~~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 456 (662)
..++.+.++.......++.+++... .++.++. +|+||||+||..|+.+++++|+ +.+..+|..|..|+||||+|+..
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~ 82 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN 82 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc
Confidence 4567788888888888999998866 5777665 9999999999999999999999 56888999999999999999999
Q ss_pred CCHHHHHHHHHc-CCCCccc--ccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCC
Q 006072 457 GNDGAASLLVKE-GASLNVE--EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAG 533 (662)
Q Consensus 457 ~~~~~v~~Ll~~-g~~~~~~--~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 533 (662)
|+.++|+.|+.+ |+++|.. .|.|+||+|+.+|..+++++|+++|+.++.+|..|.||||.|+.-|+.+++++|+..|
T Consensus 83 g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~ 162 (226)
T KOG4412|consen 83 GNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQG 162 (226)
T ss_pred CcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcC
Confidence 999999999998 9999875 4889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCC
Q 006072 534 ASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHG 576 (662)
Q Consensus 534 a~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 576 (662)
+.+|.+|+.|+||||.|...|+.++..+|+++||+....++.+
T Consensus 163 a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~ 205 (226)
T KOG4412|consen 163 APLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG 205 (226)
T ss_pred CCCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC
Confidence 9999999999999999999999999999999999999888866
No 8
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=6.8e-35 Score=286.11 Aligned_cols=198 Identities=22% Similarity=0.164 Sum_probs=182.8
Q ss_pred hhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHH
Q 006072 375 KHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAI 454 (662)
Q Consensus 375 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 454 (662)
..+..|.||||.|+..|+.++++.|++.|++++..+ |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa 102 (284)
T PHA02791 25 KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAV 102 (284)
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 357789999999999999999999999999988764 789999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHHcCCCCcccc--c-chHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHhCcHHHHHHHH
Q 006072 455 KYGNDGAASLLVKEGASLNVEE--A-GSFLCTAVARGDSDLLKRVLSNGIDPNTRD-YDLRTPLHVAASEGLYLMAKLLV 530 (662)
Q Consensus 455 ~~~~~~~v~~Ll~~g~~~~~~~--~-~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll 530 (662)
..|+.+++++|+++|++++..+ | .||||.|+..|+.+++++|+++|++. .| ..|.||||+|+..|+.+++++|+
T Consensus 103 ~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL 180 (284)
T PHA02791 103 DSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLL 180 (284)
T ss_pred HcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999987654 4 48999999999999999999987654 23 35899999999999999999999
Q ss_pred HCCCCCCCCCCCCCCh-HHHHHHcCCHHHHHHHHhccccccccCCCC
Q 006072 531 EAGASVFPKDRWGNTP-LDEGRMCGNKNLIKLLEDAKSTQLLEFPHG 576 (662)
Q Consensus 531 ~~ga~~~~~d~~g~tp-l~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 576 (662)
++||+++.+|..|.|| ||+|+..|+.+++++|+++|+++..++..+
T Consensus 181 ~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~ 227 (284)
T PHA02791 181 DYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN 227 (284)
T ss_pred HCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC
Confidence 9999999999999987 999999999999999999999998887643
No 9
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=6.7e-33 Score=272.01 Aligned_cols=215 Identities=17% Similarity=0.179 Sum_probs=186.6
Q ss_pred HHHHHHHHhcCCcchhhhhhhcCccccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 006072 345 GRKVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG 424 (662)
Q Consensus 345 ~~~il~~l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 424 (662)
+...+......+.......++......+. . ++.||||.|+..|+.++++.|++.|++++.+|..|+||||+|+..|
T Consensus 30 G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~--~--d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g 105 (284)
T PHA02791 30 GHSALYYAIADNNVRLVCTLLNAGALKNL--L--ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSG 105 (284)
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCcCCCcC--C--CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 44555555555555555555544433222 2 2579999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCcccCCCCC-cHHHHHHHhCCHHHHHHHHHcCCCCcc-cccchHHHHHHHcCCHHHHHHHHHcCCC
Q 006072 425 YEEIMTFLIQKGVDINLKDNFGN-TPLLEAIKYGNDGAASLLVKEGASLNV-EEAGSFLCTAVARGDSDLLKRVLSNGID 502 (662)
Q Consensus 425 ~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~~l~~A~~~~~~~~v~~Ll~~g~~ 502 (662)
+.+++++|+++|++++..+..|. ||||+|+..|+.+++++|++++++... ..|.||||+|+..|+.+++++|+++|++
T Consensus 106 ~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd 185 (284)
T PHA02791 106 NMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTS 185 (284)
T ss_pred CHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCCCC
Confidence 99999999999999999998884 899999999999999999999865432 3579999999999999999999999999
Q ss_pred CCCCCCCCCcH-HHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhcccccc
Q 006072 503 PNTRDYDLRTP-LHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQL 570 (662)
Q Consensus 503 ~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~ 570 (662)
+|.+|..|.|| ||+|+..|+.++|++|+++||+++.+|..| ||| ++.|++++|+++.++-.
T Consensus 186 ~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~~~e~~~~ll~~~~~~~ 247 (284)
T PHA02791 186 TNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------DDAEIAKMIIEKHVEYK 247 (284)
T ss_pred CCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------CCHHHHHHHHHhhhhhc
Confidence 99999999987 999999999999999999999999999854 666 89999999999988754
No 10
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00 E-value=3.1e-33 Score=284.09 Aligned_cols=207 Identities=29% Similarity=0.382 Sum_probs=194.4
Q ss_pred hhhhhHhHHhccCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccC-CCCCcHHHHHHHh
Q 006072 379 ELALKVNSAAYHGDLYQLEGLIRA-GADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKD-NFGNTPLLEAIKY 456 (662)
Q Consensus 379 ~~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~ 456 (662)
.....++.|++.|+++.|+.|++. |.+++..|.+|.|+||+||.+++.+++++|+++|+++|..+ .-+.||||+|+++
T Consensus 43 ~~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~ 122 (600)
T KOG0509|consen 43 SSLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARN 122 (600)
T ss_pred hhhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHc
Confidence 335678999999999999999998 99999999999999999999999999999999999999998 6788999999999
Q ss_pred CCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCC
Q 006072 457 GNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGA 534 (662)
Q Consensus 457 ~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 534 (662)
|+..+|++|+++|||++..| |.+|+|.|+..|+.-++-+|+.+|+|+|.+|.+|+||||+|+.+|+...++.||+.|+
T Consensus 123 G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a 202 (600)
T KOG0509|consen 123 GHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGA 202 (600)
T ss_pred CcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcc
Confidence 99999999999999999876 7799999999999999999999999999999999999999999999888999999999
Q ss_pred CCCCCC-CCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCccccccCC
Q 006072 535 SVFPKD-RWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADKRN 585 (662)
Q Consensus 535 ~~~~~d-~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~ 585 (662)
+++..| ..|+||||+|+..||.+++.+|++.|++....+.+|.++.+-+..
T Consensus 203 ~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~ 254 (600)
T KOG0509|consen 203 SLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQE 254 (600)
T ss_pred cccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHH
Confidence 999988 899999999999999999998899999999999888887765433
No 11
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.7e-32 Score=289.77 Aligned_cols=223 Identities=21% Similarity=0.158 Sum_probs=199.6
Q ss_pred HHHHHhcCCcchhhhhhhcCccccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHH
Q 006072 348 VLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEE 427 (662)
Q Consensus 348 il~~l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 427 (662)
-+..++..++......+++...+. +..+..|.||||.|+..|+.+++++|++.|++++..+..+.||||.|+..|+.+
T Consensus 5 ~L~~A~~~g~~~iv~~Ll~~g~~~--n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~ 82 (413)
T PHA02875 5 ALCDAILFGELDIARRLLDIGINP--NFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVK 82 (413)
T ss_pred HHHHHHHhCCHHHHHHHHHCCCCC--CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHH
Confidence 455666777777777777765443 345567899999999999999999999999999998899999999999999999
Q ss_pred HHHHHHhcCCCCc-ccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccc--ccchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 006072 428 IMTFLIQKGVDIN-LKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARGDSDLLKRVLSNGIDPN 504 (662)
Q Consensus 428 ~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~ 504 (662)
++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++.. +|.||||.|+..|+.+++++|+++|++++
T Consensus 83 ~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~ 162 (413)
T PHA02875 83 AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD 162 (413)
T ss_pred HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 9999999998764 45678999999999999999999999999998875 47899999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCC-ChHHHHHHcCCHHHHHHHHhcccccccc
Q 006072 505 TRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGN-TPLDEGRMCGNKNLIKLLEDAKSTQLLE 572 (662)
Q Consensus 505 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~-tpl~~A~~~~~~~iv~~Ll~~ga~~~~~ 572 (662)
.+|..|.||||+|+..|+.+++++|+++|++++..+..|. ||+|+|+..|+.+++++|+++|+++...
T Consensus 163 ~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~ 231 (413)
T PHA02875 163 IEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM 231 (413)
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence 9999999999999999999999999999999999988875 8899999999999999999999998765
No 12
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.7e-32 Score=294.38 Aligned_cols=205 Identities=27% Similarity=0.327 Sum_probs=187.6
Q ss_pred hhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcH-------------------------------
Q 006072 378 AELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYE------------------------------- 426 (662)
Q Consensus 378 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~------------------------------- 426 (662)
.-+.||||.|+..|+.++|+.|++.|+++|.+|..|.||||+||..|+.
T Consensus 35 ~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ 114 (477)
T PHA02878 35 LIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNV 114 (477)
T ss_pred ccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCH
Confidence 4567899999999999999999999999999999999999999876543
Q ss_pred ---------------------------------HHHHHHHhcCCCCcccCCC-CCcHHHHHHHhCCHHHHHHHHHcCCCC
Q 006072 427 ---------------------------------EIMTFLIQKGVDINLKDNF-GNTPLLEAIKYGNDGAASLLVKEGASL 472 (662)
Q Consensus 427 ---------------------------------~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 472 (662)
+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|+++
T Consensus 115 ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~ 194 (477)
T PHA02878 115 EIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANV 194 (477)
T ss_pred HHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC
Confidence 2677788889999999988 999999999999999999999999999
Q ss_pred ccc--ccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHh-CcHHHHHHHHHCCCCCCCCCC-CCCChHH
Q 006072 473 NVE--EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASE-GLYLMAKLLVEAGASVFPKDR-WGNTPLD 548 (662)
Q Consensus 473 ~~~--~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~ 548 (662)
+.. .|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+.. ++.+++++|+++|++++.++. .|.||||
T Consensus 195 n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh 274 (477)
T PHA02878 195 NIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALH 274 (477)
T ss_pred CCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHH
Confidence 876 488999999999999999999999999999999999999999976 689999999999999999986 7999999
Q ss_pred HHHHcCCHHHHHHHHhccccccccCCCCCccccccC
Q 006072 549 EGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADKR 584 (662)
Q Consensus 549 ~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 584 (662)
+| .++.+++++|+++|++++..+..|.+|...+.
T Consensus 275 ~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~ 308 (477)
T PHA02878 275 SS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAV 308 (477)
T ss_pred HH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 99 57899999999999999999999988876543
No 13
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.4e-32 Score=287.58 Aligned_cols=174 Identities=27% Similarity=0.288 Sum_probs=103.9
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccc--ccchHHHHHH
Q 006072 408 RTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAV 485 (662)
Q Consensus 408 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~ 485 (662)
.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.. .|.||||.|+
T Consensus 119 ~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~ 198 (434)
T PHA02874 119 IKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAA 198 (434)
T ss_pred CCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 34444555555555555555555555555555555555555555555555555555555555444432 2445555555
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcC-CHHHHHHHHh
Q 006072 486 ARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCG-NKNLIKLLED 564 (662)
Q Consensus 486 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-~~~iv~~Ll~ 564 (662)
..|+.+++++|+++|++++.++..|.||||.|+..+. +.+++|+ .|++++.+|..|+||||+|+..+ +.+++++|++
T Consensus 199 ~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~ 276 (434)
T PHA02874 199 EYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLY 276 (434)
T ss_pred HcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHH
Confidence 5555555555555555555555555555555554433 2333333 35667777888889999998875 7899999999
Q ss_pred ccccccccCCCCCcccccc
Q 006072 565 AKSTQLLEFPHGFQDTADK 583 (662)
Q Consensus 565 ~ga~~~~~~~~~~~~~~~~ 583 (662)
+|++....+..|.++...+
T Consensus 277 ~gad~n~~d~~g~TpL~~A 295 (434)
T PHA02874 277 HKADISIKDNKGENPIDTA 295 (434)
T ss_pred CcCCCCCCCCCCCCHHHHH
Confidence 9999999999998887654
No 14
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.1e-32 Score=286.59 Aligned_cols=198 Identities=25% Similarity=0.285 Sum_probs=189.7
Q ss_pred hhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHH
Q 006072 381 ALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDG 460 (662)
Q Consensus 381 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 460 (662)
.++||.|+..|+.++++.|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..+.||||.|+..|+.+
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~ 82 (413)
T PHA02875 3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVK 82 (413)
T ss_pred chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcc---cccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCC
Q 006072 461 AASLLVKEGASLNV---EEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVF 537 (662)
Q Consensus 461 ~v~~Ll~~g~~~~~---~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 537 (662)
+++.|++.|++.+. .+|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++
T Consensus 83 ~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~ 162 (413)
T PHA02875 83 AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD 162 (413)
T ss_pred HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 99999999986643 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCc
Q 006072 538 PKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQ 578 (662)
Q Consensus 538 ~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 578 (662)
.+|..|.||||+|+..|+.+++++|+++|+++......|.+
T Consensus 163 ~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~ 203 (413)
T PHA02875 163 IEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCV 203 (413)
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCc
Confidence 99999999999999999999999999999999988877643
No 15
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=5.5e-32 Score=293.78 Aligned_cols=216 Identities=27% Similarity=0.339 Sum_probs=189.7
Q ss_pred cCCcchhhhhhhcCccccccchhhhhhhhhHhHHh--ccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--cHHHH
Q 006072 354 QGKESDLRLKQLQSDITFHISKHEAELALKVNSAA--YHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG--YEEIM 429 (662)
Q Consensus 354 ~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~--~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v 429 (662)
..+........++..... +..+..|.||||.|+ ..|+.++++.|++.|++++..+..|.||||+|+..| +.+++
T Consensus 82 ~~~~~~iv~~Ll~~ga~i--~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv 159 (480)
T PHA03100 82 LTDVKEIVKLLLEYGANV--NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKIL 159 (480)
T ss_pred hhchHHHHHHHHHCCCCC--CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHH
Confidence 333333333444443333 556778899999999 999999999999999999999999999999999999 99999
Q ss_pred HHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccc--c------chHHHHHHHcCC--HHHHHHHHHc
Q 006072 430 TFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--A------GSFLCTAVARGD--SDLLKRVLSN 499 (662)
Q Consensus 430 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~------~~~l~~A~~~~~--~~~v~~Ll~~ 499 (662)
++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+ + .+|||.|+..|+ .+++++|+++
T Consensus 160 ~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~ 239 (480)
T PHA03100 160 KLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSY 239 (480)
T ss_pred HHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999988654 4 789999999999 9999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccc
Q 006072 500 GIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLL 571 (662)
Q Consensus 500 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~ 571 (662)
|+++|.+|..|.||||+|+..|+.+++++|+++|+|++.+|..|.||+++|+..++.+++++|+++|++...
T Consensus 240 g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~ 311 (480)
T PHA03100 240 GVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 311 (480)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997654
No 16
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=8.2e-32 Score=292.40 Aligned_cols=238 Identities=24% Similarity=0.273 Sum_probs=217.2
Q ss_pred cHHHHHHHHhcCCcchhhhhhhcCccccccchhhhhhhhhHhH-----HhccCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 006072 344 DGRKVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNS-----AAYHGDLYQLEGLIRAGADPNRTDYDGRSPLH 418 (662)
Q Consensus 344 ~~~~il~~l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~-----A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 418 (662)
.....+..+...+....+..+++...+ ++..+..+.+|||. |+..|+.++++.|++.|++++..+..|.||||
T Consensus 34 ~~~t~L~~A~~~~~~~ivk~Ll~~g~~--~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~ 111 (480)
T PHA03100 34 KPVLPLYLAKEARNIDVVKILLDNGAD--INSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLL 111 (480)
T ss_pred ccchhhhhhhccCCHHHHHHHHHcCCC--CCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhh
Confidence 344556666677777776667666544 34556677899999 99999999999999999999999999999999
Q ss_pred HHH--HcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhC--CHHHHHHHHHcCCCCccc--ccchHHHHHHHcCCHHH
Q 006072 419 LAA--SRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG--NDGAASLLVKEGASLNVE--EAGSFLCTAVARGDSDL 492 (662)
Q Consensus 419 ~A~--~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~~~~~~~~ 492 (662)
+|+ ..|+.+++++|+++|++++..+..|.||||+|+..| +.+++++|+++|++++.. .|.||||.|+..|+.++
T Consensus 112 ~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~i 191 (480)
T PHA03100 112 YAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDV 191 (480)
T ss_pred HHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHH
Confidence 999 999999999999999999999999999999999999 999999999999998765 47899999999999999
Q ss_pred HHHHHHcCCCCCCCCCCC------CcHHHHHHHhCc--HHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHh
Q 006072 493 LKRVLSNGIDPNTRDYDL------RTPLHVAASEGL--YLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLED 564 (662)
Q Consensus 493 v~~Ll~~g~~~~~~~~~g------~t~L~~A~~~~~--~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~ 564 (662)
+++|+++|++++..+..| .||||.|+..|+ .+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 192 v~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~ 271 (480)
T PHA03100 192 IKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLD 271 (480)
T ss_pred HHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999988 999999999999 999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCcccccc
Q 006072 565 AKSTQLLEFPHGFQDTADK 583 (662)
Q Consensus 565 ~ga~~~~~~~~~~~~~~~~ 583 (662)
+|+++...+..|.++...+
T Consensus 272 ~gad~n~~d~~g~tpl~~A 290 (480)
T PHA03100 272 LGANPNLVNKYGDTPLHIA 290 (480)
T ss_pred cCCCCCccCCCCCcHHHHH
Confidence 9999999999998887644
No 17
>PHA02946 ankyin-like protein; Provisional
Probab=99.98 E-value=4e-31 Score=279.20 Aligned_cols=197 Identities=21% Similarity=0.285 Sum_probs=174.5
Q ss_pred cccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCc--HHHHHHHHhcCCCCcc-cCCCCC
Q 006072 371 FHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGY--EEIMTFLIQKGVDINL-KDNFGN 447 (662)
Q Consensus 371 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~~~~~-~~~~g~ 447 (662)
.+++..+.+|.||||.|+..|+.++++.|+++|+++|.+|..|.||||+|+..++ .+++++|+++|++++. .|..|.
T Consensus 63 advn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~ 142 (446)
T PHA02946 63 YSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGC 142 (446)
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCC
Confidence 3456677889999999999999999999999999999999999999999988764 7899999999999985 688999
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCccc--ccchHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhC--
Q 006072 448 TPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARGD--SDLLKRVLSNGIDPNTRDYDLRTPLHVAASEG-- 521 (662)
Q Consensus 448 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~~~~~--~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-- 521 (662)
|||| |+..++.+++++|++.|++++.. .|.||||.|+..++ .+++++|+++|++++.+|.+|.||||+|+..|
T Consensus 143 tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~ 221 (446)
T PHA02946 143 GPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVK 221 (446)
T ss_pred cHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCC
Confidence 9997 66778999999999999988765 48899999887554 68999999999999999999999999999876
Q ss_pred cHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCC-HHHHHHHHhccccc
Q 006072 522 LYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGN-KNLIKLLEDAKSTQ 569 (662)
Q Consensus 522 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~-~~iv~~Ll~~ga~~ 569 (662)
+.+++++|+. |+++|.+|..|.||||+|+..++ .+++++|+++|++.
T Consensus 222 ~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~ 269 (446)
T PHA02946 222 NVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVI 269 (446)
T ss_pred cHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCC
Confidence 7899999885 89999999999999999999988 58999999998764
No 18
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=5.6e-31 Score=285.29 Aligned_cols=211 Identities=26% Similarity=0.330 Sum_probs=183.7
Q ss_pred cchhhhhhhhhHhHHhccC-CHHHHHHHHHcCCCCCCCCCCCCcHHHHHH--HcCcHHHHHHHHhcCCCCcccCCCCCcH
Q 006072 373 ISKHEAELALKVNSAAYHG-DLYQLEGLIRAGADPNRTDYDGRSPLHLAA--SRGYEEIMTFLIQKGVDINLKDNFGNTP 449 (662)
Q Consensus 373 ~~~~~~~~~~~L~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 449 (662)
++..+..|.||||.|+..| ..++++.|++.|++++.++..|.||||+|+ ..++.+++++|+++|++++..|..|.||
T Consensus 76 in~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tp 155 (471)
T PHA03095 76 VNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTP 155 (471)
T ss_pred CCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCH
Confidence 3445557889999999998 589999999999999988888999999988 5567889999999999999888889999
Q ss_pred HHHHHHhC--CHHHHHHHHHcCCCCcccc--cchHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcH
Q 006072 450 LLEAIKYG--NDGAASLLVKEGASLNVEE--AGSFLCTAVAR--GDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLY 523 (662)
Q Consensus 450 L~~A~~~~--~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 523 (662)
||+|+..+ +.+++++|+++|++++..+ |.||||.|+.. ++.++++.|+++|++++.+|..|.||||+|+..|+.
T Consensus 156 L~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~ 235 (471)
T PHA03095 156 LAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSC 235 (471)
T ss_pred HHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCc
Confidence 99888766 5788899999988877653 77899988865 678899999999999999999999999999998864
Q ss_pred --HHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCcccccc
Q 006072 524 --LMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADK 583 (662)
Q Consensus 524 --~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 583 (662)
.+++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++||++...+..|.++...+
T Consensus 236 ~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A 297 (471)
T PHA03095 236 KRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLM 297 (471)
T ss_pred hHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 688999999999999999999999999999999999999999999999999998887643
No 19
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=1.8e-30 Score=274.17 Aligned_cols=201 Identities=25% Similarity=0.241 Sum_probs=183.8
Q ss_pred hhhhHhHHh--ccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhC
Q 006072 380 LALKVNSAA--YHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG 457 (662)
Q Consensus 380 ~~~~L~~A~--~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 457 (662)
..++||.++ ..++.++++.|+++|+++|.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..+
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~ 116 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTD 116 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 357888766 456789999999999999999999999999999999999999999999999999999999999998866
Q ss_pred C--HHHHHHHHHcCCCCcc---cccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhC--cHHHHHHHH
Q 006072 458 N--DGAASLLVKEGASLNV---EEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEG--LYLMAKLLV 530 (662)
Q Consensus 458 ~--~~~v~~Ll~~g~~~~~---~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll 530 (662)
+ .+++++|+++|++++. .+|.|||| |+..++.+++++|++.|++++.+|..|+||||+|+..+ +.+++++|+
T Consensus 117 ~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll 195 (446)
T PHA02946 117 DEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMM 195 (446)
T ss_pred CchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHH
Confidence 4 7899999999999984 45889997 67789999999999999999999999999999998765 468999999
Q ss_pred HCCCCCCCCCCCCCChHHHHHHcC--CHHHHHHHHhccccccccCCCCCccccc
Q 006072 531 EAGASVFPKDRWGNTPLDEGRMCG--NKNLIKLLEDAKSTQLLEFPHGFQDTAD 582 (662)
Q Consensus 531 ~~ga~~~~~d~~g~tpl~~A~~~~--~~~iv~~Ll~~ga~~~~~~~~~~~~~~~ 582 (662)
++|++++.+|.+|+||||+|+..+ +.+++++|++ |++.+.++..|.+|...
T Consensus 196 ~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~ 248 (446)
T PHA02946 196 KLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTL 248 (446)
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHH
Confidence 999999999999999999999986 8899999995 89999999999988764
No 20
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.4e-30 Score=281.39 Aligned_cols=211 Identities=24% Similarity=0.236 Sum_probs=184.0
Q ss_pred hhhhhhhcCccccccchhhhhhhhhHhHHhcc-----CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC---cHHHHH
Q 006072 359 DLRLKQLQSDITFHISKHEAELALKVNSAAYH-----GDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG---YEEIMT 430 (662)
Q Consensus 359 ~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~-----g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~---~~~~v~ 430 (662)
..+..+++... +++..+..|.||||.|+.+ +..++++.|++.|+++|.+|..|.||||+|+.++ +.++++
T Consensus 52 ~iv~~Ll~~Ga--dvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~ 129 (489)
T PHA02798 52 DIVKLFINLGA--NVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILL 129 (489)
T ss_pred HHHHHHHHCCC--CCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHH
Confidence 44444444444 4556678899999999865 7799999999999999999999999999999986 789999
Q ss_pred HHHhcCCCCcccCCCCCcHHHHHHHhCC---HHHHHHHHHcCCCCccc---ccchHHHHHHHc----CCHHHHHHHHHcC
Q 006072 431 FLIQKGVDINLKDNFGNTPLLEAIKYGN---DGAASLLVKEGASLNVE---EAGSFLCTAVAR----GDSDLLKRVLSNG 500 (662)
Q Consensus 431 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~---~~~~~l~~A~~~----~~~~~v~~Ll~~g 500 (662)
+|+++|++++..|..|.||||+|+..++ .+++++|+++|++++.. .+.||||.++.. ++.+++++|+++|
T Consensus 130 ~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~G 209 (489)
T PHA02798 130 FMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNG 209 (489)
T ss_pred HHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCC
Confidence 9999999999999999999999999988 99999999999999865 367999988764 4788898888877
Q ss_pred CCC---------------------------------------CCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCC
Q 006072 501 IDP---------------------------------------NTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDR 541 (662)
Q Consensus 501 ~~~---------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 541 (662)
+++ |.+|..|.||||+|+..|+.+++++|+++|||++.+|.
T Consensus 210 a~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~ 289 (489)
T PHA02798 210 FIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITE 289 (489)
T ss_pred CCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCC
Confidence 644 45667799999999999999999999999999999999
Q ss_pred CCCChHHHHHHcCCHHHHHHHHhccccccc
Q 006072 542 WGNTPLDEGRMCGNKNLIKLLEDAKSTQLL 571 (662)
Q Consensus 542 ~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~ 571 (662)
.|+||||+|+..++.++++.|++.++++..
T Consensus 290 ~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~ 319 (489)
T PHA02798 290 LGNTCLFTAFENESKFIFNSILNKKPNKNT 319 (489)
T ss_pred CCCcHHHHHHHcCcHHHHHHHHccCCCHHH
Confidence 999999999999999999999999988764
No 21
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=2.5e-31 Score=270.27 Aligned_cols=201 Identities=29% Similarity=0.352 Sum_probs=182.8
Q ss_pred HhcCCcchhhhhhhcCccccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCcHHHHH
Q 006072 352 LLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTD-YDGRSPLHLAASRGYEEIMT 430 (662)
Q Consensus 352 l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~ 430 (662)
+.+.++-..+++..++. ...++..|.+|.++||+||.+++++++++|+++|+++|... .-+.||||+|+++|+..+|+
T Consensus 51 A~q~G~l~~v~~lve~~-g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~ 129 (600)
T KOG0509|consen 51 ATQYGELETVKELVESE-GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVD 129 (600)
T ss_pred HhhcchHHHHHHHHhhc-CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHH
Confidence 34445555555555554 44566677799999999999999999999999999999987 67889999999999999999
Q ss_pred HHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-
Q 006072 431 FLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRD- 507 (662)
Q Consensus 431 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~- 507 (662)
+|+++|||++.+|.+|.+|||.|++.|+...|-+|+.+|++++..| |+||||+|+.+|+...++.|+..|++++..|
T Consensus 130 lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~ 209 (600)
T KOG0509|consen 130 LLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDD 209 (600)
T ss_pred HHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccccccc
Confidence 9999999999999999999999999999999999999999988765 8899999999999999999999999999988
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHc
Q 006072 508 YDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMC 553 (662)
Q Consensus 508 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 553 (662)
..|.||||+|+..|+..++.+|++.|++.+.+|.+|.||+++|...
T Consensus 210 ~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 210 NHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred ccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 8999999999999999999988888999999999999999999877
No 22
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.97 E-value=2.4e-30 Score=280.54 Aligned_cols=215 Identities=19% Similarity=0.179 Sum_probs=184.9
Q ss_pred ccchhhhhhhhhHhHHhccCC--HHHHHHHHHcCCCCCCCCCCCCcHHHHH-----------------------------
Q 006072 372 HISKHEAELALKVNSAAYHGD--LYQLEGLIRAGADPNRTDYDGRSPLHLA----------------------------- 420 (662)
Q Consensus 372 ~~~~~~~~~~~~L~~A~~~g~--~~~v~~Ll~~g~~~~~~~~~g~t~L~~A----------------------------- 420 (662)
+++..+..|.||||.|+..|+ .++++.|++.|+++|.+|..|+||||+|
T Consensus 204 DVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~ 283 (764)
T PHA02716 204 NVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPM 283 (764)
T ss_pred CCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchh
Confidence 455677889999999999995 5999999999999999999999999975
Q ss_pred --------HHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHH--hCCHHHHHHHHHcCCCCcccc--cchHHHHHHH--
Q 006072 421 --------ASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIK--YGNDGAASLLVKEGASLNVEE--AGSFLCTAVA-- 486 (662)
Q Consensus 421 --------~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~-- 486 (662)
+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++..+ |.||||.|+.
T Consensus 284 ~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~l 363 (764)
T PHA02716 284 ILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSML 363 (764)
T ss_pred hhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhh
Confidence 44578899999999999999999999999999875 457899999999999998765 7899999875
Q ss_pred ------------cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH----HHhCcHHHHHHHHHCCC----------------
Q 006072 487 ------------RGDSDLLKRVLSNGIDPNTRDYDLRTPLHVA----ASEGLYLMAKLLVEAGA---------------- 534 (662)
Q Consensus 487 ------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A----~~~~~~~~v~~Ll~~ga---------------- 534 (662)
.++.+++++|+++|++++.+|..|.||||.| ...++.+++++|++.|+
T Consensus 364 av~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~ 443 (764)
T PHA02716 364 SVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRV 443 (764)
T ss_pred hhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhcc
Confidence 3688999999999999999999999999942 23467889988887653
Q ss_pred ---------------------------------------------CCCCCCCCCCChHHHHHHcCCH-----HHHHHHHh
Q 006072 535 ---------------------------------------------SVFPKDRWGNTPLDEGRMCGNK-----NLIKLLED 564 (662)
Q Consensus 535 ---------------------------------------------~~~~~d~~g~tpl~~A~~~~~~-----~iv~~Ll~ 564 (662)
++|..|..|+||||+|+..|+. +++++|++
T Consensus 444 d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~ 523 (764)
T PHA02716 444 DDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLS 523 (764)
T ss_pred CcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHh
Confidence 2345577899999999999986 45599999
Q ss_pred ccccccccCCCCCccccccCCC
Q 006072 565 AKSTQLLEFPHGFQDTADKRNP 586 (662)
Q Consensus 565 ~ga~~~~~~~~~~~~~~~~~~~ 586 (662)
.|++.+.++..|.+|...+...
T Consensus 524 ~GADIN~~d~~G~TPLh~A~~~ 545 (764)
T PHA02716 524 IQYNINIPTKNGVTPLMLTMRN 545 (764)
T ss_pred CCCCCcccCCCCCCHHHHHHHc
Confidence 9999999999999988755543
No 23
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.2e-29 Score=270.68 Aligned_cols=234 Identities=27% Similarity=0.299 Sum_probs=207.0
Q ss_pred HHHHHhcCCcchhhhhhhcCccccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHH
Q 006072 348 VLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEE 427 (662)
Q Consensus 348 il~~l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 427 (662)
.+..++.+++...+...+..+.. .++..+.++.||||.|+..|+.++|++|++.|++++..+..|.||||.|+..|+.+
T Consensus 4 ~l~~ai~~gd~~~v~~ll~~~~~-~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~ 82 (434)
T PHA02874 4 DLRMCIYSGDIEAIEKIIKNKGN-CINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHD 82 (434)
T ss_pred HHHHHHhcCCHHHHHHHHHcCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 45666777777777666654322 23445667889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCC-----------------------CcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccc--ccchHHH
Q 006072 428 IMTFLIQKGVD-----------------------INLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLC 482 (662)
Q Consensus 428 ~v~~Ll~~g~~-----------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~ 482 (662)
++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++.. +|.||||
T Consensus 83 iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh 162 (434)
T PHA02874 83 IIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIH 162 (434)
T ss_pred HHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHH
Confidence 99999988754 5667889999999999999999999999999998875 4889999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHH
Q 006072 483 TAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLL 562 (662)
Q Consensus 483 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~L 562 (662)
.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++ +++++|
T Consensus 163 ~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~L 241 (434)
T PHA02874 163 IAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELL 241 (434)
T ss_pred HHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999876 566666
Q ss_pred HhccccccccCCCCCccccccC
Q 006072 563 EDAKSTQLLEFPHGFQDTADKR 584 (662)
Q Consensus 563 l~~ga~~~~~~~~~~~~~~~~~ 584 (662)
+ .|++....+..|.++...+.
T Consensus 242 l-~~~~in~~d~~G~TpLh~A~ 262 (434)
T PHA02874 242 I-NNASINDQDIDGSTPLHHAI 262 (434)
T ss_pred H-cCCCCCCcCCCCCCHHHHHH
Confidence 6 58888888889988877554
No 24
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.97 E-value=7.3e-30 Score=276.84 Aligned_cols=205 Identities=20% Similarity=0.138 Sum_probs=179.3
Q ss_pred hhhhhhhHhHHhc--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCc--HHHHHHHHhcCCCCcccCCCCCcHHHH
Q 006072 377 EAELALKVNSAAY--HGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGY--EEIMTFLIQKGVDINLKDNFGNTPLLE 452 (662)
Q Consensus 377 ~~~~~~~L~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 452 (662)
+..|.||||.|+. .++.+++++|+++|+++|.+|..|.||||+|+..|+ .+++++|+++|+++|.+|..|.||||+
T Consensus 174 d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~ 253 (764)
T PHA02716 174 KKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMT 253 (764)
T ss_pred CCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 6778999998864 468899999999999999999999999999999985 589999999999999999999999998
Q ss_pred HH---HhCCHHHHHHHHHcCCCCcccccchHHH---HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH--hCcHH
Q 006072 453 AI---KYGNDGAASLLVKEGASLNVEEAGSFLC---TAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAAS--EGLYL 524 (662)
Q Consensus 453 A~---~~~~~~~v~~Ll~~g~~~~~~~~~~~l~---~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~--~~~~~ 524 (662)
|+ ..++.++++.|++.+......+...+++ .|+..|+.++++.|+++|+++|.+|..|+||||+|+. .++.+
T Consensus 254 Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~e 333 (764)
T PHA02716 254 YIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTD 333 (764)
T ss_pred HHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCch
Confidence 85 4678999999998754333222333444 4788999999999999999999999999999999875 45789
Q ss_pred HHHHHHHCCCCCCCCCCCCCChHHHHHH--------------cCCHHHHHHHHhccccccccCCCCCcccc
Q 006072 525 MAKLLVEAGASVFPKDRWGNTPLDEGRM--------------CGNKNLIKLLEDAKSTQLLEFPHGFQDTA 581 (662)
Q Consensus 525 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~--------------~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 581 (662)
++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|+++...+..|.+|..
T Consensus 334 IVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh 404 (764)
T PHA02716 334 IIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLT 404 (764)
T ss_pred HHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHH
Confidence 9999999999999999999999999875 36899999999999999999999999885
No 25
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.6e-29 Score=274.01 Aligned_cols=224 Identities=23% Similarity=0.213 Sum_probs=200.2
Q ss_pred hhhhhhhcCccccccchhhhhhhhhHhHHhccC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC-cHHHHHHHHh
Q 006072 359 DLRLKQLQSDITFHISKHEAELALKVNSAAYHG---DLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG-YEEIMTFLIQ 434 (662)
Q Consensus 359 ~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~ 434 (662)
+.+..+++...+ ++..+..|.||||.|+..| +.++++.|++.|+++|.++..|.||||+|+..| +.+++++|++
T Consensus 28 ~~v~~Ll~~ga~--vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~ 105 (471)
T PHA03095 28 EEVRRLLAAGAD--VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIK 105 (471)
T ss_pred HHHHHHHHcCCC--cccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHH
Confidence 334444444333 4456677899999999999 999999999999999999999999999999999 5999999999
Q ss_pred cCCCCcccCCCCCcHHHHHH--HhCCHHHHHHHHHcCCCCccc--ccchHHHHHHHcC--CHHHHHHHHHcCCCCCCCCC
Q 006072 435 KGVDINLKDNFGNTPLLEAI--KYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARG--DSDLLKRVLSNGIDPNTRDY 508 (662)
Q Consensus 435 ~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~~~~--~~~~v~~Ll~~g~~~~~~~~ 508 (662)
+|++++.+|..|.||||+|+ ..++.+++++|+++|++++.. .|.||||.|+..+ +.+++++|+++|++++..|.
T Consensus 106 ~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~ 185 (471)
T PHA03095 106 AGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDD 185 (471)
T ss_pred cCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCC
Confidence 99999999999999999999 556899999999999999875 4889999999876 68999999999999999999
Q ss_pred CCCcHHHHHHHh--CcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCH--HHHHHHHhccccccccCCCCCccccccC
Q 006072 509 DLRTPLHVAASE--GLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNK--NLIKLLEDAKSTQLLEFPHGFQDTADKR 584 (662)
Q Consensus 509 ~g~t~L~~A~~~--~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~--~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 584 (662)
.|.||||+|+.. ++.++++.|+++|++++.+|..|+||||+|+..|+. .+++.|++.|++.+..+..|.++...+.
T Consensus 186 ~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~ 265 (471)
T PHA03095 186 RFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAA 265 (471)
T ss_pred CCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 999999999975 788999999999999999999999999999999974 6889999999999999999988877443
No 26
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.9e-29 Score=272.19 Aligned_cols=214 Identities=24% Similarity=0.307 Sum_probs=186.6
Q ss_pred HHHHhcCCcchhhhhhhcCccccccchhhhhhhhhHhHHhccCCHH----------------------------------
Q 006072 349 LTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLY---------------------------------- 394 (662)
Q Consensus 349 l~~l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~~~---------------------------------- 394 (662)
+..+...+....+..+++.+. +++..+..|.||||.||..|+.+
T Consensus 41 Lh~A~~~g~~e~vk~Ll~~ga--dvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~ 118 (477)
T PHA02878 41 LHQAVEARNLDVVKSLLTRGH--NVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFK 118 (477)
T ss_pred HHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHH
Confidence 566666777766666666544 34556778889999998765532
Q ss_pred ------------------------------HHHHHHHcCCCCCCCCCC-CCcHHHHHHHcCcHHHHHHHHhcCCCCcccC
Q 006072 395 ------------------------------QLEGLIRAGADPNRTDYD-GRSPLHLAASRGYEEIMTFLIQKGVDINLKD 443 (662)
Q Consensus 395 ------------------------------~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 443 (662)
+++.|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++..|
T Consensus 119 ~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d 198 (477)
T PHA02878 119 IILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPD 198 (477)
T ss_pred HHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcC
Confidence 666777788899999888 9999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHc-CCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHH
Q 006072 444 NFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVAR-GDSDLLKRVLSNGIDPNTRDY-DLRTPLHVAAS 519 (662)
Q Consensus 444 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~-~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 519 (662)
..|.||||.|+..|+.+++++|++.|++++..+ |.||||+|+.. ++.+++++|+++|+++|.++. .|.||||+|
T Consensus 199 ~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A-- 276 (477)
T PHA02878 199 KTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS-- 276 (477)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--
Confidence 999999999999999999999999999998764 88999999976 789999999999999999886 799999999
Q ss_pred hCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcC-CHHHHHHHHhcc
Q 006072 520 EGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCG-NKNLIKLLEDAK 566 (662)
Q Consensus 520 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-~~~iv~~Ll~~g 566 (662)
.++.+++++|+++|||+|..|..|.||||+|+..+ ..+++++|+.++
T Consensus 277 ~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~ 324 (477)
T PHA02878 277 IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNI 324 (477)
T ss_pred ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHH
Confidence 57889999999999999999999999999999864 567888887664
No 27
>PHA02795 ankyrin-like protein; Provisional
Probab=99.97 E-value=3.5e-29 Score=254.23 Aligned_cols=185 Identities=17% Similarity=0.041 Sum_probs=171.4
Q ss_pred HHhccCCHHHHHHHHHcCCCCC------CCCCCCCcHHHHHHH--cCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhC
Q 006072 386 SAAYHGDLYQLEGLIRAGADPN------RTDYDGRSPLHLAAS--RGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG 457 (662)
Q Consensus 386 ~A~~~g~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 457 (662)
.|+..+..|+++.|+.+|++++ .++..++|+||+|+. .|+.+++++|+++|||++.. .+.||+|.|+..+
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~ 160 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKK 160 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcC
Confidence 8999999999999999999998 788899999999999 89999999999999999985 4589999999999
Q ss_pred CHHHHHHHHHcCCCCccc--------ccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHH
Q 006072 458 NDGAASLLVKEGASLNVE--------EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLL 529 (662)
Q Consensus 458 ~~~~v~~Ll~~g~~~~~~--------~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 529 (662)
+.+++++|+++|++.... .+.+++|.|+..++.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|
T Consensus 161 ~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelL 240 (437)
T PHA02795 161 ESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWL 240 (437)
T ss_pred cHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999854322 256789999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCChHHHHHHcCC--------HHHHHHHHhcccccccc
Q 006072 530 VEAGASVFPKDRWGNTPLDEGRMCGN--------KNLIKLLEDAKSTQLLE 572 (662)
Q Consensus 530 l~~ga~~~~~d~~g~tpl~~A~~~~~--------~~iv~~Ll~~ga~~~~~ 572 (662)
+++||+++.+|..|.||||+|+..|+ .+++++|+++|++....
T Consensus 241 L~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~ 291 (437)
T PHA02795 241 LENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCI 291 (437)
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCch
Confidence 99999999999999999999999984 69999999999977654
No 28
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=2.1e-29 Score=283.76 Aligned_cols=212 Identities=24% Similarity=0.271 Sum_probs=195.3
Q ss_pred ccchhhhhhhhhHhHHhccCCH-HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC-cHHHHHHHHhcCCCCcccCCCCCcH
Q 006072 372 HISKHEAELALKVNSAAYHGDL-YQLEGLIRAGADPNRTDYDGRSPLHLAASRG-YEEIMTFLIQKGVDINLKDNFGNTP 449 (662)
Q Consensus 372 ~~~~~~~~~~~~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~g~t~ 449 (662)
.++..+..|.||||.|+..|+. ++++.|++.|++++..|..|.||||+|+..| +.++++.|+..|++++..|..|.||
T Consensus 265 ~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~Tp 344 (682)
T PHA02876 265 SVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITP 344 (682)
T ss_pred CCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcH
Confidence 4555677899999999999997 5899999999999999999999999999999 5999999999999999999999999
Q ss_pred HHHHHHh-CCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCc-HHH
Q 006072 450 LLEAIKY-GNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGL-YLM 525 (662)
Q Consensus 450 L~~A~~~-~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~ 525 (662)
||+|+.. ++.+++++|++.|++++..+ |.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ ..+
T Consensus 345 Lh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~ 424 (682)
T PHA02876 345 LHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMS 424 (682)
T ss_pred HHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHH
Confidence 9999985 57889999999999998764 8899999999999999999999999999999999999999998665 568
Q ss_pred HHHHHHCCCCCCCCCCCCCChHHHHHHcC-CHHHHHHHHhccccccccCCCCCcccccc
Q 006072 526 AKLLVEAGASVFPKDRWGNTPLDEGRMCG-NKNLIKLLEDAKSTQLLEFPHGFQDTADK 583 (662)
Q Consensus 526 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 583 (662)
+++|+++|+++|.+|..|+||||+|+..| +.+++++|+++|++++..+..|.++...+
T Consensus 425 vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a 483 (682)
T PHA02876 425 VKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIA 483 (682)
T ss_pred HHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999977 78999999999999999999998887643
No 29
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.97 E-value=3.2e-29 Score=271.21 Aligned_cols=189 Identities=18% Similarity=0.258 Sum_probs=131.2
Q ss_pred hhhhHhHHhccC------CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc---CcHHHHHHHHhcCCCC-cccCCCCCcH
Q 006072 380 LALKVNSAAYHG------DLYQLEGLIRAGADPNRTDYDGRSPLHLAASR---GYEEIMTFLIQKGVDI-NLKDNFGNTP 449 (662)
Q Consensus 380 ~~~~L~~A~~~g------~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 449 (662)
+.||||.|+.++ ..++++.|+++|+++|.+|..|.||||.|+.. |+.+++++|+++|+|+ +..|..|.||
T Consensus 69 ~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tp 148 (494)
T PHA02989 69 IETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNL 148 (494)
T ss_pred CCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCH
Confidence 467777776543 35677777777777777777777777776654 5677777777777777 6777777777
Q ss_pred HHHHHHh--CCHHHHHHHHHcCCCCccc---ccchHHHHHHHcC----CHHHHHHHHHcCCCCCCC--------------
Q 006072 450 LLEAIKY--GNDGAASLLVKEGASLNVE---EAGSFLCTAVARG----DSDLLKRVLSNGIDPNTR-------------- 506 (662)
Q Consensus 450 L~~A~~~--~~~~~v~~Ll~~g~~~~~~---~~~~~l~~A~~~~----~~~~v~~Ll~~g~~~~~~-------------- 506 (662)
||+|+.. ++.+++++|+++|++++.. .|.||||.|+..+ +.+++++|+++|++++..
T Consensus 149 Lh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~ 228 (494)
T PHA02989 149 LHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDN 228 (494)
T ss_pred HHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHh
Confidence 7777654 4677777777777777652 3667777776543 677777777777666544
Q ss_pred ------------------------CCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHH
Q 006072 507 ------------------------DYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLL 562 (662)
Q Consensus 507 ------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~L 562 (662)
|..|.||||+|+..|+.+++++|+++|||++.+|..|+||||+|+..|+.+++++|
T Consensus 229 ~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~L 308 (494)
T PHA02989 229 NKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRI 308 (494)
T ss_pred chhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 44566777777766777777777777777777776677777777777777777766
Q ss_pred Hhcccc
Q 006072 563 EDAKST 568 (662)
Q Consensus 563 l~~ga~ 568 (662)
++.++.
T Consensus 309 L~~~p~ 314 (494)
T PHA02989 309 LQLKPG 314 (494)
T ss_pred HhcCCC
Confidence 666543
No 30
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.97 E-value=3.5e-29 Score=237.50 Aligned_cols=175 Identities=16% Similarity=0.210 Sum_probs=157.7
Q ss_pred hhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHhcCCCCcccC-CCCCcHHHHH
Q 006072 377 EAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG--YEEIMTFLIQKGVDINLKD-NFGNTPLLEA 453 (662)
Q Consensus 377 ~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A 453 (662)
.+...+|||.|+..|+.+.|+.|++. ++..|..|.||||+|+..+ +.+++++|+++|+++|.++ ..|.||||+|
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a 94 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY 94 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence 45568999999999999999999975 5667889999999999865 8999999999999999997 5899999998
Q ss_pred HHh---CCHHHHHHHHHcCCCCcccc--cchHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHH-HHHhCcHHH
Q 006072 454 IKY---GNDGAASLLVKEGASLNVEE--AGSFLCTAVA--RGDSDLLKRVLSNGIDPNTRDYDLRTPLHV-AASEGLYLM 525 (662)
Q Consensus 454 ~~~---~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~--~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-A~~~~~~~~ 525 (662)
+.. ++.+++++|+++|++++..+ |.||||.|+. .++.+++++|+++|++++.+|..|.||||. |+..++.++
T Consensus 95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~i 174 (209)
T PHA02859 95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKI 174 (209)
T ss_pred HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHH
Confidence 864 47999999999999998764 8899999886 468999999999999999999999999996 566789999
Q ss_pred HHHHHHCCCCCCCCCCCCCChHHHHHHcC
Q 006072 526 AKLLVEAGASVFPKDRWGNTPLDEGRMCG 554 (662)
Q Consensus 526 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 554 (662)
+++|+++|++++.+|..|+||||+|+.++
T Consensus 175 v~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 175 FDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 99999999999999999999999998764
No 31
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.96 E-value=5.2e-29 Score=269.60 Aligned_cols=225 Identities=19% Similarity=0.163 Sum_probs=187.3
Q ss_pred CcchhhhhhhcCccccccchhhhhhhhhHhHHhcc--CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC------cHH
Q 006072 356 KESDLRLKQLQSDITFHISKHEAELALKVNSAAYH--GDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG------YEE 427 (662)
Q Consensus 356 ~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~ 427 (662)
.+.+.+..+++...+.+. . ..|.++||.++.. ++.++|+.|+++|+++|.++ .+.||||.|+.++ +.+
T Consensus 14 ~~~~~v~~LL~~GadvN~--~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~ 89 (494)
T PHA02989 14 VDKNALEFLLRTGFDVNE--E-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKK 89 (494)
T ss_pred CcHHHHHHHHHcCCCccc--c-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHH
Confidence 333444444544444333 2 3567887665543 47999999999999999886 5799999998754 578
Q ss_pred HHHHHHhcCCCCcccCCCCCcHHHHHHHh---CCHHHHHHHHHcCCCC-cc--cccchHHHHHHHc--CCHHHHHHHHHc
Q 006072 428 IMTFLIQKGVDINLKDNFGNTPLLEAIKY---GNDGAASLLVKEGASL-NV--EEAGSFLCTAVAR--GDSDLLKRVLSN 499 (662)
Q Consensus 428 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~-~~--~~~~~~l~~A~~~--~~~~~v~~Ll~~ 499 (662)
++++|+++|+|+|.+|..|.||||.|+.. ++.+++++|+++|+++ +. ..|.||||.|+.. ++.+++++|+++
T Consensus 90 iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~ 169 (494)
T PHA02989 90 IVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF 169 (494)
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc
Confidence 99999999999999999999999998765 6799999999999999 54 4588999998765 688999999999
Q ss_pred CCCCCC-CCCCCCcHHHHHHHhC----cHHHHHHHHHCCCCCCC------------------------------------
Q 006072 500 GIDPNT-RDYDLRTPLHVAASEG----LYLMAKLLVEAGASVFP------------------------------------ 538 (662)
Q Consensus 500 g~~~~~-~~~~g~t~L~~A~~~~----~~~~v~~Ll~~ga~~~~------------------------------------ 538 (662)
|++++. .+..|.||||+|+..+ +.+++++|+++|++++.
T Consensus 170 Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~adv 249 (494)
T PHA02989 170 GVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKI 249 (494)
T ss_pred CCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCC
Confidence 999998 6789999999998764 89999999999987654
Q ss_pred --CCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCccccccC
Q 006072 539 --KDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADKR 584 (662)
Q Consensus 539 --~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 584 (662)
+|..|+||||+|+..|+.+++++|+++||++...+..|.++...+.
T Consensus 250 n~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~ 297 (494)
T PHA02989 250 NKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAI 297 (494)
T ss_pred CCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 4556999999999999999999999999999999999988877443
No 32
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.96 E-value=8.9e-29 Score=278.73 Aligned_cols=231 Identities=23% Similarity=0.204 Sum_probs=181.9
Q ss_pred HHHhcCCcchhhhhhhcCccccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q 006072 350 TNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIM 429 (662)
Q Consensus 350 ~~l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 429 (662)
...+..++......+++.+.+ ++..+..|.||||.||..|+.++|++|++.|++++..+..|.||||+|+..|+.+++
T Consensus 150 ~~~i~~~~~~i~k~Ll~~Gad--vn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~iv 227 (682)
T PHA02876 150 KERIQQDELLIAEMLLEGGAD--VNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTI 227 (682)
T ss_pred HHHHHCCcHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHH
Confidence 333344444444444444443 445677889999999999999999999999999999888899999998888887776
Q ss_pred HHHH-----------------------------hcCCCCcccCCCCCcHHHHHHHhCCH-HHHHHHHHcCCCCccc--cc
Q 006072 430 TFLI-----------------------------QKGVDINLKDNFGNTPLLEAIKYGND-GAASLLVKEGASLNVE--EA 477 (662)
Q Consensus 430 ~~Ll-----------------------------~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~--~~ 477 (662)
+.|+ +.|++++..+..|.||||+|+..++. +++++|++.|++++.. +|
T Consensus 228 k~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g 307 (682)
T PHA02876 228 KAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKG 307 (682)
T ss_pred HHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCC
Confidence 6554 44556777778888999999988886 5888888888888765 47
Q ss_pred chHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHh-CcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCC
Q 006072 478 GSFLCTAVARG-DSDLLKRVLSNGIDPNTRDYDLRTPLHVAASE-GLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGN 555 (662)
Q Consensus 478 ~~~l~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 555 (662)
.||||.|+..| +.++++.|+..|++++..|..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 308 ~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~ 387 (682)
T PHA02876 308 ETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNN 387 (682)
T ss_pred CCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCC
Confidence 88888888888 57888888888888888888888888888875 46778888888888888888888888888888888
Q ss_pred HHHHHHHHhccccccccCCCCCccccc
Q 006072 556 KNLIKLLEDAKSTQLLEFPHGFQDTAD 582 (662)
Q Consensus 556 ~~iv~~Ll~~ga~~~~~~~~~~~~~~~ 582 (662)
.+++++|+++|+++......+.++...
T Consensus 388 ~~iv~~Ll~~gad~~~~~~~g~T~Lh~ 414 (682)
T PHA02876 388 VVIINTLLDYGADIEALSQKIGTALHF 414 (682)
T ss_pred HHHHHHHHHCCCCccccCCCCCchHHH
Confidence 888888888888887777766665543
No 33
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=3.2e-29 Score=259.31 Aligned_cols=213 Identities=27% Similarity=0.297 Sum_probs=191.5
Q ss_pred ccccchhhhhhhhhHhHHhccCCHHHHHHHHH-----cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCC------
Q 006072 370 TFHISKHEAELALKVNSAAYHGDLYQLEGLIR-----AGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVD------ 438 (662)
Q Consensus 370 ~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------ 438 (662)
..+..+.+.++.+|+|.|+.+|..++.+..+. ++..+|.-+..|.||||.|+..|+.++++.++++|..
T Consensus 177 ~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~ 256 (929)
T KOG0510|consen 177 GADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQL 256 (929)
T ss_pred CCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhh
Confidence 34566778888999999999999999999998 6777888899999999999999999999999998653
Q ss_pred ---------CcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccc--ccchHHHHHHHcCCHHHHHHHHH-cC-CCCCC
Q 006072 439 ---------INLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARGDSDLLKRVLS-NG-IDPNT 505 (662)
Q Consensus 439 ---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~~~~~~~~v~~Ll~-~g-~~~~~ 505 (662)
+|..|.+|.||||+||+.|++++++.|+..|++++.+ ++.||||.|+..|+.+.|+.|++ .| ...|.
T Consensus 257 ~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne 336 (929)
T KOG0510|consen 257 DAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNE 336 (929)
T ss_pred HHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCcccccc
Confidence 3556889999999999999999999999999999875 57899999999999999999998 44 45688
Q ss_pred CCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCC---CCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCccccc
Q 006072 506 RDYDLRTPLHVAASEGLYLMAKLLVEAGASVF---PKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTAD 582 (662)
Q Consensus 506 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~ 582 (662)
.|..|.||||.|+..|+..++++|+++||+.. ..|.+|.||||.|+..|+..+|++|+.+||+....+..|.+....
T Consensus 337 ~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 337 SDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT 416 (929)
T ss_pred ccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence 89999999999999999999999999999987 569999999999999999999999999999998888888766653
No 34
>PHA02798 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.4e-28 Score=265.97 Aligned_cols=200 Identities=22% Similarity=0.222 Sum_probs=179.2
Q ss_pred hHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc-----CcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhC--
Q 006072 385 NSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASR-----GYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG-- 457 (662)
Q Consensus 385 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-----~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-- 457 (662)
..+...++.++++.|+++|+++|..+..|.||||.|+.+ ++.+++++|+++|+|+|.+|..|.||||+|+..+
T Consensus 43 yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~ 122 (489)
T PHA02798 43 YLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYI 122 (489)
T ss_pred HHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCc
Confidence 344556689999999999999999999999999999865 6789999999999999999999999999999875
Q ss_pred -CHHHHHHHHHcCCCCcccc--cchHHHHHHHcCC---HHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHh----CcHHHH
Q 006072 458 -NDGAASLLVKEGASLNVEE--AGSFLCTAVARGD---SDLLKRVLSNGIDPNTRD-YDLRTPLHVAASE----GLYLMA 526 (662)
Q Consensus 458 -~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~---~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~----~~~~~v 526 (662)
+.+++++|+++|++++..+ |.||||.|+..++ .+++++|+++|++++..+ ..|.||||.++.. ++.+++
T Consensus 123 ~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~iv 202 (489)
T PHA02798 123 NNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADIL 202 (489)
T ss_pred ChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHH
Confidence 7899999999999998764 8899999999998 999999999999999885 5799999998865 378899
Q ss_pred HHHHHCCCCC---------------------------------------CCCCCCCCChHHHHHHcCCHHHHHHHHhccc
Q 006072 527 KLLVEAGASV---------------------------------------FPKDRWGNTPLDEGRMCGNKNLIKLLEDAKS 567 (662)
Q Consensus 527 ~~Ll~~ga~~---------------------------------------~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga 567 (662)
++|+++|+++ |.+|..|+||||+|+..|+.+++++|+++||
T Consensus 203 k~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GA 282 (489)
T PHA02798 203 KLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGG 282 (489)
T ss_pred HHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCC
Confidence 9998887654 4567789999999999999999999999999
Q ss_pred cccccCCCCCccccccC
Q 006072 568 TQLLEFPHGFQDTADKR 584 (662)
Q Consensus 568 ~~~~~~~~~~~~~~~~~ 584 (662)
++...+..|.++...+.
T Consensus 283 din~~d~~G~TpL~~A~ 299 (489)
T PHA02798 283 DINIITELGNTCLFTAF 299 (489)
T ss_pred cccccCCCCCcHHHHHH
Confidence 99999999998877443
No 35
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=2.8e-29 Score=244.11 Aligned_cols=188 Identities=27% Similarity=0.373 Sum_probs=174.0
Q ss_pred hhhhhhhHhHHhccCCHHHHHHHHHc-CCCCCCC--------CCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCC
Q 006072 377 EAELALKVNSAAYHGDLYQLEGLIRA-GADPNRT--------DYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGN 447 (662)
Q Consensus 377 ~~~~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~--------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 447 (662)
...|.|||..||++|+.++|++|+++ ++++... .-.|-+||-.|+..||.++|+.|+++|+++|.......
T Consensus 39 ~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNS 118 (615)
T KOG0508|consen 39 VQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNS 118 (615)
T ss_pred ccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCC
Confidence 45567999999999999999999984 6665433 45788999999999999999999999999999999899
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHH
Q 006072 448 TPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLM 525 (662)
Q Consensus 448 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 525 (662)
|||--||.-|+.+++++|+++|+|++..+ |.|.||+||.+|+.+++++|++.|+|+|.++..|+|+||.|++.|+.++
T Consensus 119 tPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdi 198 (615)
T KOG0508|consen 119 TPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDI 198 (615)
T ss_pred ccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHH
Confidence 99999999999999999999999998865 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhc
Q 006072 526 AKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDA 565 (662)
Q Consensus 526 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ 565 (662)
+++|+++|+.++. |..|.|||..|+..|+.++|+.|++.
T Consensus 199 vq~Ll~~ga~i~~-d~~GmtPL~~Aa~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 199 VQLLLKHGAKIDV-DGHGMTPLLLAAVTGHTDIVERLLQC 237 (615)
T ss_pred HHHHHhCCceeee-cCCCCchHHHHhhhcchHHHHHHhcC
Confidence 9999999999874 55699999999999999999999974
No 36
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=1e-28 Score=255.60 Aligned_cols=211 Identities=24% Similarity=0.325 Sum_probs=189.1
Q ss_pred cccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHh-----cCCCCcccCCC
Q 006072 371 FHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQ-----KGVDINLKDNF 445 (662)
Q Consensus 371 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~ 445 (662)
.+++-.+..+.||||.||..++.|..+.|++.|+++-..|.+|.+|+|.|+..|..++.+..+. .+..+|..+..
T Consensus 145 ~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~ 224 (929)
T KOG0510|consen 145 ADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNE 224 (929)
T ss_pred CCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCC
Confidence 4566678888999999999999998899999999999999999999999999999999999988 56789999999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCcc-----------------cccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 006072 446 GNTPLLEAIKYGNDGAASLLVKEGASLNV-----------------EEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDY 508 (662)
Q Consensus 446 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----------------~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 508 (662)
|.||||.|+..|+.++++.+++.|+.... .+|.||||+|++.|+.+.++.|+..|++++.+++
T Consensus 225 ~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~ 304 (929)
T KOG0510|consen 225 KATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNK 304 (929)
T ss_pred CCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCC
Confidence 99999999999999999999998865432 3578999999999999999999999999999999
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHH-CC-CCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccc---cCCCCCcccc
Q 006072 509 DLRTPLHVAASEGLYLMAKLLVE-AG-ASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLL---EFPHGFQDTA 581 (662)
Q Consensus 509 ~g~t~L~~A~~~~~~~~v~~Ll~-~g-a~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~---~~~~~~~~~~ 581 (662)
++.||||.||..|+.++|+-||+ .| ...|..|..|.||||+|+.+||..++++|++.||.... .+..|.++..
T Consensus 305 d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH 382 (929)
T KOG0510|consen 305 DEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALH 382 (929)
T ss_pred CCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhh
Confidence 99999999999999999999999 55 56789999999999999999999999999999999873 3555555543
No 37
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.96 E-value=5.4e-27 Score=267.39 Aligned_cols=185 Identities=20% Similarity=0.215 Sum_probs=164.4
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCC
Q 006072 391 GDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGA 470 (662)
Q Consensus 391 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 470 (662)
.+.++-..+.+.+.. ..+..+.++||.||..|+.++++.|+++|+|+|..|..|.||||+|+..|+.+++++|+++|+
T Consensus 505 ~~l~v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga 582 (823)
T PLN03192 505 HDLNVGDLLGDNGGE--HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHAC 582 (823)
T ss_pred ccccHHHHHhhcccc--cCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCC
Confidence 444444555555443 234567899999999999999999999999999999999999999999999999999999999
Q ss_pred CCccc--ccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHH
Q 006072 471 SLNVE--EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLD 548 (662)
Q Consensus 471 ~~~~~--~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 548 (662)
+++.. +|.||||.|+..|+.+++++|++.++..+. ..|.+|||.|+..|+.++++.|+++|+|+|.+|.+|+||||
T Consensus 583 din~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh 660 (823)
T PLN03192 583 NVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQ 660 (823)
T ss_pred CCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 99875 488999999999999999999998876553 45789999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhccccccccCCCC-Ccc
Q 006072 549 EGRMCGNKNLIKLLEDAKSTQLLEFPHG-FQD 579 (662)
Q Consensus 549 ~A~~~~~~~iv~~Ll~~ga~~~~~~~~~-~~~ 579 (662)
+|+..|+.+++++|+++||++...+..+ .++
T Consensus 661 ~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~ 692 (823)
T PLN03192 661 VAMAEDHVDMVRLLIMNGADVDKANTDDDFSP 692 (823)
T ss_pred HHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCH
Confidence 9999999999999999999999888776 443
No 38
>PHA02917 ankyrin-like protein; Provisional
Probab=99.95 E-value=3.4e-27 Score=258.55 Aligned_cols=194 Identities=17% Similarity=0.118 Sum_probs=166.3
Q ss_pred chhhhhhhhhHhHHhcc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHH----HHHHHHhcCCCCcccCCCC
Q 006072 374 SKHEAELALKVNSAAYH---GDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEE----IMTFLIQKGVDINLKDNFG 446 (662)
Q Consensus 374 ~~~~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g 446 (662)
+..+..|.||||.|+.. |+.++++.|++.|++++..+..|.||||+|+..|+.+ +++.|++.+...+..+ .
T Consensus 26 ~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~--~ 103 (661)
T PHA02917 26 DTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIND--F 103 (661)
T ss_pred cccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCC--c
Confidence 45577889999997555 8899999999999999999999999999999999854 5678887754444433 2
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCccc--ccchHHHHHH--HcCCHHHHHHHHHcCCCCCCCCC---CC---------
Q 006072 447 NTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAV--ARGDSDLLKRVLSNGIDPNTRDY---DL--------- 510 (662)
Q Consensus 447 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~--~~~~~~~v~~Ll~~g~~~~~~~~---~g--------- 510 (662)
.+++++|+..++.+++++|+++|++++.. +|.||||.|+ ..|+.+++++|+++|+++|..|. .|
T Consensus 104 ~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~ 183 (661)
T PHA02917 104 NIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPR 183 (661)
T ss_pred chHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccccc
Confidence 37788899999999999999999999985 4889999654 57899999999999999986653 34
Q ss_pred --CcHHHHHHH-----------hCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCH--HHHHHHHhcccccc
Q 006072 511 --RTPLHVAAS-----------EGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNK--NLIKLLEDAKSTQL 570 (662)
Q Consensus 511 --~t~L~~A~~-----------~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~--~iv~~Ll~~ga~~~ 570 (662)
.||||+|+. .++.+++++|+++|||+|.+|.+|.||||+|+.+|+. +++++|++ |++..
T Consensus 184 ~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~ 257 (661)
T PHA02917 184 NCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNT 257 (661)
T ss_pred ccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCccc
Confidence 599999986 4689999999999999999999999999999999985 79999985 77654
No 39
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.95 E-value=1.1e-27 Score=210.39 Aligned_cols=223 Identities=23% Similarity=0.260 Sum_probs=193.6
Q ss_pred HHHhcCCcchhhhhhhcCccccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q 006072 350 TNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIM 429 (662)
Q Consensus 350 ~~l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 429 (662)
.....++..+........+.+-.. ..+++|..+++.|+-.|+.+.+...+.+|...|..+..+++|+.+++...+++++
T Consensus 67 ~~~~~s~nsd~~v~s~~~~~~~~~-~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~ 145 (296)
T KOG0502|consen 67 TVAVRSGNSDVAVQSAQLDPDAID-ETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVV 145 (296)
T ss_pred chhhhcCCcHHHHHhhccCCCCCC-CCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHH
Confidence 333333333444444444444333 3455699999999999999999999999999999999999999999999999998
Q ss_pred HHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccc--ccchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 006072 430 TFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRD 507 (662)
Q Consensus 430 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~ 507 (662)
..+.++ .+|..|..|.|||.||+..|+..+|++|++.|++++.- ...++|.+|++.|..++|++|+..++|+|..|
T Consensus 146 ~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyD 223 (296)
T KOG0502|consen 146 DLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYD 223 (296)
T ss_pred HHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceec
Confidence 877765 68899999999999999999999999999999999874 46799999999999999999999999999999
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCC
Q 006072 508 YDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHG 576 (662)
Q Consensus 508 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 576 (662)
.+|.|||-+|++.|+.+|++.|+..|||++..+..|+++++.|+..|+. +|+..++..+..+..++..
T Consensus 224 wNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~ 291 (296)
T KOG0502|consen 224 WNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEK 291 (296)
T ss_pred cCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccC
Confidence 9999999999999999999999999999999999999999999999999 8888888877776665443
No 40
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95 E-value=6.7e-27 Score=221.88 Aligned_cols=173 Identities=20% Similarity=0.189 Sum_probs=154.9
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhC--CHHHHHHHHHcCCCCccc---ccchHHHHH
Q 006072 410 DYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG--NDGAASLLVKEGASLNVE---EAGSFLCTA 484 (662)
Q Consensus 410 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~---~~~~~l~~A 484 (662)
...+.||||.|+..|+.++|+.|++. ++..|..|.||||+|+..+ +.+++++|+++|++++.. .|.||||.|
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a 94 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY 94 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence 35679999999999999999999985 5677889999999999855 899999999999999875 478999998
Q ss_pred HHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH--hCcHHHHHHHHHCCCCCCCCCCCCCChHHH-HHHcCCHHH
Q 006072 485 VAR---GDSDLLKRVLSNGIDPNTRDYDLRTPLHVAAS--EGLYLMAKLLVEAGASVFPKDRWGNTPLDE-GRMCGNKNL 558 (662)
Q Consensus 485 ~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~-A~~~~~~~i 558 (662)
+.. ++.+++++|+++|+++|.+|..|.||||.|+. .++.+++++|+++|++++.+|..|.||||. |+..++.++
T Consensus 95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~i 174 (209)
T PHA02859 95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKI 174 (209)
T ss_pred HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHH
Confidence 764 47999999999999999999999999999986 468999999999999999999999999995 567889999
Q ss_pred HHHHHhccccccccCCCCCccccccCC
Q 006072 559 IKLLEDAKSTQLLEFPHGFQDTADKRN 585 (662)
Q Consensus 559 v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 585 (662)
+++|+++|+++..++..|.++.+.+..
T Consensus 175 v~~Ll~~Gadi~~~d~~g~tpl~la~~ 201 (209)
T PHA02859 175 FDFLTSLGIDINETNKSGYNCYDLIKF 201 (209)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHhh
Confidence 999999999999999999887764443
No 41
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95 E-value=1.8e-27 Score=231.58 Aligned_cols=195 Identities=26% Similarity=0.343 Sum_probs=171.5
Q ss_pred HHhccCCHHHHHHHHHcCCC-----CCCCCCCCCcHHHHHHHcCcHHHHHHHHh-cCCCCccc--------CCCCCcHHH
Q 006072 386 SAAYHGDLYQLEGLIRAGAD-----PNRTDYDGRSPLHLAASRGYEEIMTFLIQ-KGVDINLK--------DNFGNTPLL 451 (662)
Q Consensus 386 ~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~--------~~~g~t~L~ 451 (662)
.|+..|.+..+..|+.+..+ +-....+|.|||..||++||.++|++|++ .++++... .-.|-+||.
T Consensus 10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLW 89 (615)
T KOG0508|consen 10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLW 89 (615)
T ss_pred HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhh
Confidence 68888888888887765332 11234678899999999999999999999 57776543 346889999
Q ss_pred HHHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHH
Q 006072 452 EAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLL 529 (662)
Q Consensus 452 ~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 529 (662)
.|+..||.++|+.|+++|+++|... ..|||-.||-.|+.+++++|+++|+|++..|..|.|.||+||..|+.+++++|
T Consensus 90 aAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyL 169 (615)
T KOG0508|consen 90 AASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYL 169 (615)
T ss_pred HHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHH
Confidence 9999999999999999999999754 56999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCcccc
Q 006072 530 VEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTA 581 (662)
Q Consensus 530 l~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 581 (662)
++.|||+|.++..|+|+||.|+..|+.+++++|+++|+...... +|.+|.-
T Consensus 170 le~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~-~GmtPL~ 220 (615)
T KOG0508|consen 170 LEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDG-HGMTPLL 220 (615)
T ss_pred HHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeeecC-CCCchHH
Confidence 99999999999999999999999999999999999999876543 4777654
No 42
>PHA02730 ankyrin-like protein; Provisional
Probab=99.94 E-value=2.2e-26 Score=244.92 Aligned_cols=190 Identities=15% Similarity=0.138 Sum_probs=164.7
Q ss_pred hhhhhhhhhHhHHhccC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHhcCC--CCcccCCCCC
Q 006072 375 KHEAELALKVNSAAYHG---DLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG--YEEIMTFLIQKGV--DINLKDNFGN 447 (662)
Q Consensus 375 ~~~~~~~~~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~--~~~~~~~~g~ 447 (662)
..+.+|.||||+|+..| +.++++.|+++|++++.+|..|+||||+|+..+ +.+++++|+++|+ +++..+..+.
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d 115 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIND 115 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCC
Confidence 56678999999999997 599999999999999999999999999999977 7999999999965 4577787899
Q ss_pred cHHHHHHH--hCCHHHHHHHHH-cCCCCccc-------ccchHHHHHHHcCCHHHHHHHHHcCCCCC-------CCCCCC
Q 006072 448 TPLLEAIK--YGNDGAASLLVK-EGASLNVE-------EAGSFLCTAVARGDSDLLKRVLSNGIDPN-------TRDYDL 510 (662)
Q Consensus 448 t~L~~A~~--~~~~~~v~~Ll~-~g~~~~~~-------~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g 510 (662)
+|||.++. +++.+++++|++ .+++++.. .|.+|+++|...++.++|++|+++|++++ ..+..+
T Consensus 116 ~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~ 195 (672)
T PHA02730 116 FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDR 195 (672)
T ss_pred chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCc
Confidence 99999998 889999999997 66776654 46799999999999999999999999996 234444
Q ss_pred C-cHHHHH------HHhCcHHHHHHHHHCCCCCCCCCCCCCChHHH--HHHcCCHHHHHHHHh
Q 006072 511 R-TPLHVA------ASEGLYLMAKLLVEAGASVFPKDRWGNTPLDE--GRMCGNKNLIKLLED 564 (662)
Q Consensus 511 ~-t~L~~A------~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~--A~~~~~~~iv~~Ll~ 564 (662)
. |.||++ ...++.+++++|+++|||+|.+|.+|.||||+ |...|+.|++++|++
T Consensus 196 c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 196 CKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred cchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 4 445533 35578999999999999999999999999995 555677999999999
No 43
>PHA02917 ankyrin-like protein; Provisional
Probab=99.94 E-value=5.3e-26 Score=249.13 Aligned_cols=192 Identities=18% Similarity=0.161 Sum_probs=168.3
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc---CcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHH----HHHHH
Q 006072 393 LYQLEGLIRAGADPNRTDYDGRSPLHLAASR---GYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDG----AASLL 465 (662)
Q Consensus 393 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~L 465 (662)
++.++.|+..|..++.+|.+|+||||+|+.. |+.+++++|+++|++++..+..|.||||+|+..|+.+ +++.|
T Consensus 12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~L 91 (661)
T PHA02917 12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMAL 91 (661)
T ss_pred HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHH
Confidence 5778999999998999899999999998665 8899999999999999999999999999999999854 56788
Q ss_pred HHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH--HhCcHHHHHHHHHCCCCCCCCCC--
Q 006072 466 VKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAA--SEGLYLMAKLLVEAGASVFPKDR-- 541 (662)
Q Consensus 466 l~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~ga~~~~~d~-- 541 (662)
++.+...+..+...+++.|+.+++.+++++|+++|+++|.+|..|.||||.|+ ..|+.+++++|+++||+++..|.
T Consensus 92 l~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~ 171 (661)
T PHA02917 92 LEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDD 171 (661)
T ss_pred HhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccc
Confidence 88765455555567888999999999999999999999999999999999654 57899999999999999986653
Q ss_pred -CC-----------CChHHHHHH-----------cCCHHHHHHHHhccccccccCCCCCccccccC
Q 006072 542 -WG-----------NTPLDEGRM-----------CGNKNLIKLLEDAKSTQLLEFPHGFQDTADKR 584 (662)
Q Consensus 542 -~g-----------~tpl~~A~~-----------~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 584 (662)
.| .||||+|+. .++.+++++|+++|++.+..+..|.+|...+.
T Consensus 172 ~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~ 237 (661)
T PHA02917 172 EYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYI 237 (661)
T ss_pred ccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHH
Confidence 34 599999986 56899999999999999999999988777443
No 44
>PHA02792 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.3e-25 Score=236.29 Aligned_cols=234 Identities=14% Similarity=0.084 Sum_probs=188.9
Q ss_pred HHHHH-hcCCcchhhhhhhcCccccccchhhhhhhhhHhHHhc-cCCHHHHHHHHHcCCCCC------------------
Q 006072 348 VLTNL-LQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAY-HGDLYQLEGLIRAGADPN------------------ 407 (662)
Q Consensus 348 il~~l-~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~-~g~~~~v~~Ll~~g~~~~------------------ 407 (662)
+++.+ ..+++.+.+..+..+..+.+ ..+..+.++++.|+. .|+.|++++|+++|++++
T Consensus 74 ~~~~~~s~n~~lElvk~LI~~GAdvN--~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~ 151 (631)
T PHA02792 74 IFEYLCSDNIDIELLKLLISKGLEIN--SIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAE 151 (631)
T ss_pred HHHHHHHhcccHHHHHHHHHcCCCcc--cccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccccc
Confidence 44333 34555566666666655444 445568899999966 699999999999998742
Q ss_pred ------------------CCCCCCCcHHHHHHHcC-------cHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhC--CHH
Q 006072 408 ------------------RTDYDGRSPLHLAASRG-------YEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG--NDG 460 (662)
Q Consensus 408 ------------------~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~ 460 (662)
..|..|.||||+|+.++ +.|+++.|+++|++++..|..|.||||+|+.+. ..+
T Consensus 152 ~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~e 231 (631)
T PHA02792 152 YYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKRE 231 (631)
T ss_pred ccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHH
Confidence 23456999999999999 899999999999999999999999999999988 566
Q ss_pred HHHHHHHc------------------------------------------------------------------------
Q 006072 461 AASLLVKE------------------------------------------------------------------------ 468 (662)
Q Consensus 461 ~v~~Ll~~------------------------------------------------------------------------ 468 (662)
++++|++.
T Consensus 232 i~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~ 311 (631)
T PHA02792 232 IFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLS 311 (631)
T ss_pred HHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHH
Confidence 66666542
Q ss_pred -------------------CCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC--CcHHHHHHHhCcH---H
Q 006072 469 -------------------GASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDL--RTPLHVAASEGLY---L 524 (662)
Q Consensus 469 -------------------g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~~---~ 524 (662)
|++.........++.|+..|+.+++++|+++|++++.+|.+| .||||.|+..+.. +
T Consensus 312 ~Yl~~~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~ 391 (631)
T PHA02792 312 EYVSYHTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLS 391 (631)
T ss_pred HHHhcCCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHH
Confidence 221111112335778899999999999999999999999775 6999998876654 4
Q ss_pred HHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCcccccc
Q 006072 525 MAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADK 583 (662)
Q Consensus 525 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 583 (662)
++++|+++|||+|.+|..|.||||+|+..++.+++++|+++|++....+..|.++...+
T Consensus 392 IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A 450 (631)
T PHA02792 392 ILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGIC 450 (631)
T ss_pred HHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 68999999999999999999999999999999999999999999999999998876643
No 45
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=7.7e-27 Score=257.52 Aligned_cols=196 Identities=35% Similarity=0.418 Sum_probs=119.0
Q ss_pred cchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC-cHHHHHHHHhcCCCCcccCCCCCcHHH
Q 006072 373 ISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG-YEEIMTFLIQKGVDINLKDNFGNTPLL 451 (662)
Q Consensus 373 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 451 (662)
.+.....|.||||.|+..++..+++.+++.|++++..+..|.||+|+|+..| ..++...+++.|+++|.....|.||||
T Consensus 400 ~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lh 479 (1143)
T KOG4177|consen 400 PNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLH 479 (1143)
T ss_pred cccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchh
Confidence 4455556666666666666666666666666666666666677777777766 666666666777777777777777777
Q ss_pred HHHHhCCHHHHHHHHHcCCCCc---------------------------------cc--ccchHHHHHHHcCCHHHHHHH
Q 006072 452 EAIKYGNDGAASLLVKEGASLN---------------------------------VE--EAGSFLCTAVARGDSDLLKRV 496 (662)
Q Consensus 452 ~A~~~~~~~~v~~Ll~~g~~~~---------------------------------~~--~~~~~l~~A~~~~~~~~v~~L 496 (662)
.|+..|+.++++.|++.++..+ .. .+.||||.|+..|+.++|++|
T Consensus 480 laaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfL 559 (1143)
T KOG4177|consen 480 LAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFL 559 (1143)
T ss_pred hhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHh
Confidence 7777777776666666553322 22 233555555555555555555
Q ss_pred HHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhcccc
Q 006072 497 LSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKST 568 (662)
Q Consensus 497 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~ 568 (662)
+++|+|++.+++.|+||||.||..|+.+|+++|+++||++|..|.+|.|||++|+..|+.+++++|+..+++
T Consensus 560 Le~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 560 LEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred hhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 555555555555555555555555555555555555555555555555555555555555555555555555
No 46
>PHA02795 ankyrin-like protein; Provisional
Probab=99.93 E-value=1.9e-25 Score=227.09 Aligned_cols=184 Identities=16% Similarity=0.114 Sum_probs=169.9
Q ss_pred HHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCc------ccCCCCCcHHHHHHH--hCCHHHHHHHHH
Q 006072 396 LEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDIN------LKDNFGNTPLLEAIK--YGNDGAASLLVK 467 (662)
Q Consensus 396 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~--~~~~~~v~~Ll~ 467 (662)
-++++.+|+++|....+| +|+..+..|++++|+.+|++++ ..+..++|+||.|+. .|+.+++++|++
T Consensus 65 ~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~ 139 (437)
T PHA02795 65 YDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVD 139 (437)
T ss_pred HHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHH
Confidence 477889999999888777 9999999999999999999998 788889999999999 899999999999
Q ss_pred cCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCC------CCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCC
Q 006072 468 EGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRD------YDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDR 541 (662)
Q Consensus 468 ~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 541 (662)
+||+++..++.||+|.|+..++.+++++|+++|++.+... ..|.||+|.|+..++.+++++|+++|||+|.+|.
T Consensus 140 ~GADIn~~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~ 219 (437)
T PHA02795 140 HGAVIYKIECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDA 219 (437)
T ss_pred CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCC
Confidence 9999999888999999999999999999999998543222 3478999999999999999999999999999999
Q ss_pred CCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCccccccC
Q 006072 542 WGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADKR 584 (662)
Q Consensus 542 ~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 584 (662)
.|.||||+|+..|+.+++++|+++||+....+..|.++...+.
T Consensus 220 ~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa 262 (437)
T PHA02795 220 GGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAV 262 (437)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999998877443
No 47
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.93 E-value=7.7e-26 Score=249.70 Aligned_cols=188 Identities=28% Similarity=0.391 Sum_probs=172.6
Q ss_pred ccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcH
Q 006072 370 TFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTP 449 (662)
Q Consensus 370 ~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 449 (662)
....+.....|.||||.|+..|+.++++.+++.++..+.....|.|+||.|...+...+++.++++|++++.++..|.||
T Consensus 464 g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~Tp 543 (1143)
T KOG4177|consen 464 GADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTP 543 (1143)
T ss_pred CCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccch
Confidence 34555666788999999999999999999999998888888899999999999999999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHH
Q 006072 450 LLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAK 527 (662)
Q Consensus 450 L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 527 (662)
||.||..|+.++|++|+++|++++..+ |.||||.||..|+.+++++|+++|+++|..|.+|.||||+|+..|+.++++
T Consensus 544 Lh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k 623 (1143)
T KOG4177|consen 544 LHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVK 623 (1143)
T ss_pred HHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhh
Confidence 999999999999999999999998764 889999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCC-----CCCCCCCCCChHHHHHHcCCHH
Q 006072 528 LLVEAGAS-----VFPKDRWGNTPLDEGRMCGNKN 557 (662)
Q Consensus 528 ~Ll~~ga~-----~~~~d~~g~tpl~~A~~~~~~~ 557 (662)
+|+..|++ ....+..|.+|..++......+
T Consensus 624 ~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~~~~~~ 658 (1143)
T KOG4177|consen 624 LLKVVTATPAATDPVKENRKGAVPEDVAEELDTDR 658 (1143)
T ss_pred HHHhccCccccccchhhhhcccChhhHHHHhhhhh
Confidence 99999999 7777889999999887665443
No 48
>PHA02730 ankyrin-like protein; Provisional
Probab=99.93 E-value=8.8e-25 Score=232.75 Aligned_cols=198 Identities=19% Similarity=0.145 Sum_probs=168.6
Q ss_pred ccchhhhhhhhhHh--HHhccCCHHHHHHHHH--------------------------------cCCCCCC---------
Q 006072 372 HISKHEAELALKVN--SAAYHGDLYQLEGLIR--------------------------------AGADPNR--------- 408 (662)
Q Consensus 372 ~~~~~~~~~~~~L~--~A~~~g~~~~v~~Ll~--------------------------------~g~~~~~--------- 408 (662)
+++..+..|.|||| .|+..|+.|+++.|++ .|+|...
T Consensus 227 dIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 306 (672)
T PHA02730 227 SIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRH 306 (672)
T ss_pred CCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccC
Confidence 45677889999998 4666788999999999 6777644
Q ss_pred -----------CCCCCCc---------------------HHHHHHHcC---cHHHHHHHHhcCCCCcccCCCCCcHHHHH
Q 006072 409 -----------TDYDGRS---------------------PLHLAASRG---YEEIMTFLIQKGVDINLKDNFGNTPLLEA 453 (662)
Q Consensus 409 -----------~~~~g~t---------------------~L~~A~~~~---~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 453 (662)
.+..|.+ .||.-...+ +.+++++|+++||++|.. ..|.||||+|
T Consensus 307 ~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~A 385 (672)
T PHA02730 307 TLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDY 385 (672)
T ss_pred cchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHH
Confidence 4556654 777777766 589999999999999985 7899999999
Q ss_pred HHhCC----HHHHHHHHHcCC--CCccc--ccchHHHH---HHHcC---------CHHHHHHHHHcCCCCCCCCCCCCcH
Q 006072 454 IKYGN----DGAASLLVKEGA--SLNVE--EAGSFLCT---AVARG---------DSDLLKRVLSNGIDPNTRDYDLRTP 513 (662)
Q Consensus 454 ~~~~~----~~~v~~Ll~~g~--~~~~~--~~~~~l~~---A~~~~---------~~~~v~~Ll~~g~~~~~~~~~g~t~ 513 (662)
+..++ .+++++|+++|+ +++.. .|.||||. |...+ ..+++++|+.+|+++|.+|..|.||
T Consensus 386 a~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TP 465 (672)
T PHA02730 386 FVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTL 465 (672)
T ss_pred HHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCH
Confidence 98875 899999999998 46644 48899984 33232 2357999999999999999999999
Q ss_pred HHHHHHhCcHHHHHHHHHCCCCCCCCCC-CCCChHHHHHHc--CCHHHHHHHHhcccccc
Q 006072 514 LHVAASEGLYLMAKLLVEAGASVFPKDR-WGNTPLDEGRMC--GNKNLIKLLEDAKSTQL 570 (662)
Q Consensus 514 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~--~~~~iv~~Ll~~ga~~~ 570 (662)
||+|+..++.+++++|+++||++|.+|. .|.||||+|+.. ++.+++++|+++||+..
T Consensus 466 Lh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~ 525 (672)
T PHA02730 466 LYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLE 525 (672)
T ss_pred HHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHH
Confidence 9999999999999999999999999997 599999999974 78999999999999764
No 49
>PHA02792 ankyrin-like protein; Provisional
Probab=99.91 E-value=1.4e-23 Score=221.10 Aligned_cols=198 Identities=14% Similarity=0.109 Sum_probs=161.4
Q ss_pred cccchhhhhhhhhHhHHhccC-------CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHh-------
Q 006072 371 FHISKHEAELALKVNSAAYHG-------DLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG--YEEIMTFLIQ------- 434 (662)
Q Consensus 371 ~~~~~~~~~~~~~L~~A~~~g-------~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~------- 434 (662)
..++-.+..|.||||+|+.++ +.++++.|+++|++++..|..|.||||+|+.+. +.|++++|++
T Consensus 166 ~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~ 245 (631)
T PHA02792 166 YTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNE 245 (631)
T ss_pred cccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccc
Confidence 344556667888888888888 788888888888888888888888888887776 5566665554
Q ss_pred --------------------------------------------------------------------------------
Q 006072 435 -------------------------------------------------------------------------------- 434 (662)
Q Consensus 435 -------------------------------------------------------------------------------- 434 (662)
T Consensus 246 ~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK 325 (631)
T PHA02792 246 LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIK 325 (631)
T ss_pred hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHH
Confidence
Q ss_pred ----cCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccc----cchHHHHHHHcCCHH---HHHHHHHcCCCC
Q 006072 435 ----KGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE----AGSFLCTAVARGDSD---LLKRVLSNGIDP 503 (662)
Q Consensus 435 ----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~----~~~~l~~A~~~~~~~---~v~~Ll~~g~~~ 503 (662)
+|++.+ ...+..+++.|+..|+.+++++|+++|++++..+ +.||||.|+.....+ +++.|+++|+++
T Consensus 326 ~LId~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADI 403 (631)
T PHA02792 326 CMIDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDI 403 (631)
T ss_pred HHHHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcc
Confidence 222221 1124567899999999999999999999998765 348999988776654 588899999999
Q ss_pred CCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHH---cC-------CHHHHHHHHhcccccc
Q 006072 504 NTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRM---CG-------NKNLIKLLEDAKSTQL 570 (662)
Q Consensus 504 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~---~~-------~~~iv~~Ll~~ga~~~ 570 (662)
|.+|..|.||||+|+..++.+++++|+++||+++.+|..|.|||++|+. .+ ..+++++|+++|++..
T Consensus 404 N~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~ 480 (631)
T PHA02792 404 NKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE 480 (631)
T ss_pred ccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999999999999976 22 2567899999997764
No 50
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.91 E-value=7.9e-24 Score=240.52 Aligned_cols=220 Identities=20% Similarity=0.119 Sum_probs=175.7
Q ss_pred HHHHHHHhcCCcchhhhhhhcCccccccchhhhhhhhhHh-HHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 006072 346 RKVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVN-SAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG 424 (662)
Q Consensus 346 ~~il~~l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~-~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 424 (662)
.+-+..+++.++...+...++.....+++..|..|.|||| .|+.+++.++++.|++.|+ .+..|.||||.|+.++
T Consensus 18 ~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~ 93 (743)
T TIGR00870 18 EKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEY 93 (743)
T ss_pred HHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhcc
Confidence 4445555566666666666665335566677888999999 8999999999999999887 5678999999999732
Q ss_pred ---cHHHHHHHHhcCCC------Cc----ccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccc----------------
Q 006072 425 ---YEEIMTFLIQKGVD------IN----LKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE---------------- 475 (662)
Q Consensus 425 ---~~~~v~~Ll~~g~~------~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~---------------- 475 (662)
..++++.+...+.+ ++ ..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 94 ~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~ 173 (743)
T TIGR00870 94 VDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFY 173 (743)
T ss_pred HHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCccc
Confidence 22444455544422 11 12346999999999999999999999999998853
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhC---------cHHHHHHHHHCCCCC-------CCC
Q 006072 476 EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEG---------LYLMAKLLVEAGASV-------FPK 539 (662)
Q Consensus 476 ~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~---------~~~~v~~Ll~~ga~~-------~~~ 539 (662)
.|.+|||.|+..|+.+++++|+++|+|+|.+|..|+||||+|+..+ ...+.+++++.++.. +..
T Consensus 174 ~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~ 253 (743)
T TIGR00870 174 HGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVIL 253 (743)
T ss_pred ccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhc
Confidence 3779999999999999999999999999999999999999999986 234667777766554 677
Q ss_pred CCCCCChHHHHHHcCCHHHHHHHHhccccc
Q 006072 540 DRWGNTPLDEGRMCGNKNLIKLLEDAKSTQ 569 (662)
Q Consensus 540 d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~ 569 (662)
|.+|.||||+|+..|+.+++++|++.+.+.
T Consensus 254 N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~ 283 (743)
T TIGR00870 254 NHQGLTPLKLAAKEGRIVLFRLKLAIKYKQ 283 (743)
T ss_pred CCCCCCchhhhhhcCCccHHHHHHHHHHhc
Confidence 999999999999999999999999976553
No 51
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.90 E-value=3e-24 Score=188.82 Aligned_cols=198 Identities=21% Similarity=0.159 Sum_probs=181.0
Q ss_pred hHhHHhccCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHH
Q 006072 383 KVNSAAYHGDLYQLEGLIRAGAD-PNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGA 461 (662)
Q Consensus 383 ~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 461 (662)
-+-.|...|+.+++.....-.++ ++.++.+|+++++.|+-.++.+.+..++.+|+..|..+--+.+|+.+++...+.+.
T Consensus 65 ~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~ 144 (296)
T KOG0502|consen 65 LLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDV 144 (296)
T ss_pred ccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHH
Confidence 34456777888877777665444 55677889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCC
Q 006072 462 ASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDR 541 (662)
Q Consensus 462 v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 541 (662)
+..+.+.-.+-..+.|.|||.+|+..|+.++|++|++.|+|++...+...|+|.+|+..|..++|++||.++.|+|.-|-
T Consensus 145 ~~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDw 224 (296)
T KOG0502|consen 145 VDLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDW 224 (296)
T ss_pred HHHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceecc
Confidence 99988887777777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCccc
Q 006072 542 WGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDT 580 (662)
Q Consensus 542 ~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~ 580 (662)
+|-|||-+|++.|+.++++.|++.||++......|....
T Consensus 225 NGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~m 263 (296)
T KOG0502|consen 225 NGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIM 263 (296)
T ss_pred CCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHH
Confidence 999999999999999999999999999999988886644
No 52
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.90 E-value=1.6e-23 Score=208.94 Aligned_cols=201 Identities=31% Similarity=0.368 Sum_probs=172.6
Q ss_pred hhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHH
Q 006072 382 LKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGA 461 (662)
Q Consensus 382 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 461 (662)
-.+..|+..|+.+-+..|+..|++++..+.+|.|+||-||...+.+||++|+++|+++|..|..|+||||.|+..|+.++
T Consensus 42 a~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i 121 (527)
T KOG0505|consen 42 AVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI 121 (527)
T ss_pred HHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccc--cchH------------HHHHHHcCC--H------------HHHHHHHHcCCCCCCCCCCCCcH
Q 006072 462 ASLLVKEGASLNVEE--AGSF------------LCTAVARGD--S------------DLLKRVLSNGIDPNTRDYDLRTP 513 (662)
Q Consensus 462 v~~Ll~~g~~~~~~~--~~~~------------l~~A~~~~~--~------------~~v~~Ll~~g~~~~~~~~~g~t~ 513 (662)
+++|+++|+++...+ |..| +-.+..... . +-++..+..|.+.+..+..|.|+
T Consensus 122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~ 201 (527)
T KOG0505|consen 122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATA 201 (527)
T ss_pred HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchH
Confidence 999999998865533 2222 111111111 1 12333344788889888889999
Q ss_pred HHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCccccc
Q 006072 514 LHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTAD 582 (662)
Q Consensus 514 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~ 582 (662)
||+|+.+|..++.++|+++|.+++.+|.+|+||||.|+..|..+++++|+++|++.......|.++...
T Consensus 202 lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv 270 (527)
T KOG0505|consen 202 LHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDV 270 (527)
T ss_pred HHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999999888887766553
No 53
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90 E-value=2.1e-23 Score=214.94 Aligned_cols=211 Identities=23% Similarity=0.249 Sum_probs=189.8
Q ss_pred ccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcH
Q 006072 370 TFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTP 449 (662)
Q Consensus 370 ~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 449 (662)
..+.+.+|..+.|+||.|+.+|+.++++.|++..+-++..+..|.+|||+|+++|+.++++.|+.++..+|..+..|.||
T Consensus 39 sds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tp 118 (854)
T KOG0507|consen 39 SDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETP 118 (854)
T ss_pred CccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCc
Confidence 34566777899999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHcCCCC--------CCCCCCCCcHHHHHHH
Q 006072 450 LLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDP--------NTRDYDLRTPLHVAAS 519 (662)
Q Consensus 450 L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~A~~ 519 (662)
||.|+++|+.+++.+|+++|+|+-..+ +.|+|-.|++.|..++++.|+....+. ..++-.+-+|||.|++
T Consensus 119 lhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaak 198 (854)
T KOG0507|consen 119 LHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAK 198 (854)
T ss_pred cchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhh
Confidence 999999999999999999999987654 789999999999999999999763221 2344567899999999
Q ss_pred hCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCcccc
Q 006072 520 EGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTA 581 (662)
Q Consensus 520 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 581 (662)
+|+.++++.|+++|.|+|.....| |+||.|+..|..++|.+|++.|.....++.++.+..+
T Consensus 199 ngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtald 259 (854)
T KOG0507|consen 199 NGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALD 259 (854)
T ss_pred cchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHH
Confidence 999999999999999999887764 8999999999999999999999999999988866544
No 54
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.90 E-value=1.8e-23 Score=197.66 Aligned_cols=174 Identities=27% Similarity=0.373 Sum_probs=153.1
Q ss_pred CCHHHHHHHHHc----CCC-----CCCCCCCCCcHHHHHHHcCcHHHHHHHHhcC-CCCcccCCCCCcHHHHHHHh----
Q 006072 391 GDLYQLEGLIRA----GAD-----PNRTDYDGRSPLHLAASRGYEEIMTFLIQKG-VDINLKDNFGNTPLLEAIKY---- 456 (662)
Q Consensus 391 g~~~~v~~Ll~~----g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~---- 456 (662)
-+.+.|+..+.. ++. +|..|.+|+|+||||+.+++.++|+.||+.| ++++.+|..|.||+++|+..
T Consensus 237 a~pe~V~~~l~~f~als~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~ 316 (452)
T KOG0514|consen 237 SDPEQVEDYLAYFEALSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQ 316 (452)
T ss_pred CCHHHHHHHHHHHHhcChHHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcc
Confidence 356666665542 222 6788999999999999999999999999987 78999999999999999864
Q ss_pred -CCHHHHHHHHHcCCCCcc---cccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHC
Q 006072 457 -GNDGAASLLVKEGASLNV---EEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEA 532 (662)
Q Consensus 457 -~~~~~v~~Ll~~g~~~~~---~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 532 (662)
.+..+|.-|.+.| |+|. +.|.|+|++|+..|+.++|+.||..|+|+|.+|.+|.|+|++||.+|+.|++++||..
T Consensus 317 ~~d~~vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~ 395 (452)
T KOG0514|consen 317 PADRTVVERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV 395 (452)
T ss_pred hhhHHHHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhcc
Confidence 3567888888875 4554 3589999999999999999999999999999999999999999999999999999987
Q ss_pred -CCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhc
Q 006072 533 -GASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDA 565 (662)
Q Consensus 533 -ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ 565 (662)
++|....|.+|.|+|.+|...||.||.-+|-.+
T Consensus 396 p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 396 PSCDISLTDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred CcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 699999999999999999999999999988654
No 55
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.89 E-value=7.6e-23 Score=232.47 Aligned_cols=201 Identities=21% Similarity=0.178 Sum_probs=166.4
Q ss_pred hhhhhhhHhHHhccCCHHHHHHHHHc--CCCCCCCCCCCCcHHH-HHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHH
Q 006072 377 EAELALKVNSAAYHGDLYQLEGLIRA--GADPNRTDYDGRSPLH-LAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEA 453 (662)
Q Consensus 377 ~~~~~~~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~-~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 453 (662)
-.++..+++.||..|+.+.++.+++. +.++|..|..|.|||| .|+.+++.+++++|+++|+ .+..|.||||.|
T Consensus 14 ~~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A 89 (743)
T TIGR00870 14 LSDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAI 89 (743)
T ss_pred CCHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHH
Confidence 34668999999999999999999998 8999999999999999 8999999999999999987 677899999999
Q ss_pred HHhC---CHHHHHHHHHcCCCC------c------ccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------
Q 006072 454 IKYG---NDGAASLLVKEGASL------N------VEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRD----------- 507 (662)
Q Consensus 454 ~~~~---~~~~v~~Ll~~g~~~------~------~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~----------- 507 (662)
+..+ ...+++.+.+.+.+. + ...|.||||+|+.+|+.+++++|+++|++++.++
T Consensus 90 ~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~ 169 (743)
T TIGR00870 90 SLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGV 169 (743)
T ss_pred HhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCC
Confidence 8722 223444444444321 1 1358899999999999999999999999998653
Q ss_pred ---CCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcC---------CHHHHHHHHhccccc------
Q 006072 508 ---YDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCG---------NKNLIKLLEDAKSTQ------ 569 (662)
Q Consensus 508 ---~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~---------~~~iv~~Ll~~ga~~------ 569 (662)
..|.||||.|+..|+.+++++|+++|+|++.+|..|+||||+|+..+ ...+.+++++.++..
T Consensus 170 ~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el 249 (743)
T TIGR00870 170 DSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKEL 249 (743)
T ss_pred CcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhh
Confidence 35899999999999999999999999999999999999999999987 234667777766654
Q ss_pred -cccCCCCCcccc
Q 006072 570 -LLEFPHGFQDTA 581 (662)
Q Consensus 570 -~~~~~~~~~~~~ 581 (662)
...+.+|.++..
T Consensus 250 ~~i~N~~g~TPL~ 262 (743)
T TIGR00870 250 EVILNHQGLTPLK 262 (743)
T ss_pred hhhcCCCCCCchh
Confidence 445666666544
No 56
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.88 E-value=4.4e-22 Score=181.64 Aligned_cols=148 Identities=18% Similarity=0.187 Sum_probs=106.3
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCcH----HHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccccc
Q 006072 402 AGADPNRTDYDGRSPLHLAASRGYE----EIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEA 477 (662)
Q Consensus 402 ~g~~~~~~~~~g~t~L~~A~~~~~~----~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 477 (662)
+|++++..+.++.++||.||+.|+. +++++|++.|++++..|..|+||||+|+..|+.+.+
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~--------------- 73 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAV--------------- 73 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHH---------------
Confidence 4566666777788888888888887 566677778888888888888888888887765542
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHhCcHHHHHHHHH-CCCCCCCCCCCCCChHHHHHHcCC
Q 006072 478 GSFLCTAVARGDSDLLKRVLSNGIDPNTRD-YDLRTPLHVAASEGLYLMAKLLVE-AGASVFPKDRWGNTPLDEGRMCGN 555 (662)
Q Consensus 478 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~ 555 (662)
+++++|+++|+++|.+| ..|.||||+|+..|+.+++++|+. .|++++.+|..|.||||+|+..++
T Consensus 74 -------------~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~ 140 (166)
T PHA02743 74 -------------MKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRD 140 (166)
T ss_pred -------------HHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCC
Confidence 22445555556666666 467777777777777777777774 677777777777777777777777
Q ss_pred HHHHHHHHhccccccccCCCCC
Q 006072 556 KNLIKLLEDAKSTQLLEFPHGF 577 (662)
Q Consensus 556 ~~iv~~Ll~~ga~~~~~~~~~~ 577 (662)
.+++++|+++|++...+...|.
T Consensus 141 ~~iv~~Ll~~ga~~~~~~~~~~ 162 (166)
T PHA02743 141 RRMMEILRANGAVCDDPLSIGL 162 (166)
T ss_pred HHHHHHHHHcCCCCCCcccCCc
Confidence 7777777777777766665553
No 57
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.88 E-value=2e-22 Score=201.09 Aligned_cols=197 Identities=30% Similarity=0.373 Sum_probs=164.4
Q ss_pred CCcchhhhhhhcCccccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHh
Q 006072 355 GKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQ 434 (662)
Q Consensus 355 ~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 434 (662)
+++...+...+.... ..+..+.+|.|+||.||...+.++|++|+++|+++|..|..||||||.|+..|+..++++|++
T Consensus 50 ~~d~~ev~~ll~~ga--~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~ 127 (527)
T KOG0505|consen 50 RGDLEEVRKLLNRGA--SPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQ 127 (527)
T ss_pred cccHHHHHHHhccCC--CccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHH
Confidence 333344444444432 236778899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccCCCCCcHHHHHHHhCCH--------------------------HHHHHHHHcCCCCccc--ccchHHHHHHH
Q 006072 435 KGVDINLKDNFGNTPLLEAIKYGND--------------------------GAASLLVKEGASLNVE--EAGSFLCTAVA 486 (662)
Q Consensus 435 ~g~~~~~~~~~g~t~L~~A~~~~~~--------------------------~~v~~Ll~~g~~~~~~--~~~~~l~~A~~ 486 (662)
+|+++...|..|..|+..+..-... +=++..+..|...+.. .|.|.||.|+.
T Consensus 128 ~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa 207 (527)
T KOG0505|consen 128 HGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAA 207 (527)
T ss_pred hhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHh
Confidence 9999888888777775544321111 1133344466655443 38899999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHc
Q 006072 487 RGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMC 553 (662)
Q Consensus 487 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 553 (662)
+|..++.++|+++|.+++.+|.+|+||||.|+..|..+++++|+++|++.+..+..|.||+++|...
T Consensus 208 ~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 208 NGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEE 274 (527)
T ss_pred hhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999753
No 58
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.87 E-value=3.4e-22 Score=206.03 Aligned_cols=219 Identities=23% Similarity=0.279 Sum_probs=188.2
Q ss_pred cHHHHHHHHhcCCcchhhhhhhcCccccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 006072 344 DGRKVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASR 423 (662)
Q Consensus 344 ~~~~il~~l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 423 (662)
.+...++.+..++.......+++....+++.+ .+|.+|||+|+++|+.++++.++.++..+|..+..|.||||.|++.
T Consensus 48 ~gfTalhha~Lng~~~is~llle~ea~ldl~d--~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqh 125 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQISKLLLDYEALLDLCD--TKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQH 125 (854)
T ss_pred cchhHHHHHHhcCchHHHHHHhcchhhhhhhh--ccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhh
Confidence 45566667766666666666666666666655 8899999999999999999999999988999999999999999999
Q ss_pred CcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCC----------cccccchHHHHHHHcCCHHHH
Q 006072 424 GYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASL----------NVEEAGSFLCTAVARGDSDLL 493 (662)
Q Consensus 424 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------~~~~~~~~l~~A~~~~~~~~v 493 (662)
||.+++.+|+++|+|+-.+|..+.|+|..|++.|+.++++.|++..... ....+.+|||.|+++|+.+++
T Consensus 126 gh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~ 205 (854)
T KOG0507|consen 126 GHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECM 205 (854)
T ss_pred cchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHH
Confidence 9999999999999999999999999999999999999999999873221 112355789999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcC---CHHHHHHHHhc
Q 006072 494 KRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCG---NKNLIKLLEDA 565 (662)
Q Consensus 494 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~---~~~iv~~Ll~~ 565 (662)
+.|++.|.++|.....| |+||.|+..|..++|++|++.|.+...+|.+|.|+|++-...- ..+++-.+.+.
T Consensus 206 ~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~~ 279 (854)
T KOG0507|consen 206 QALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVKNF 279 (854)
T ss_pred HHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcchhhhhhhhhhhhcc
Confidence 99999999999988766 9999999999999999999999999999999999999876543 34555555443
No 59
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.87 E-value=1.1e-21 Score=179.03 Aligned_cols=123 Identities=17% Similarity=0.012 Sum_probs=98.6
Q ss_pred cCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q 006072 435 KGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPL 514 (662)
Q Consensus 435 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 514 (662)
+|++++..+..+.+++|.||+.|+.+.++ +++++|++.|++++.+|..|+|||
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~---------------------------~~~~~l~~~g~~~~~~d~~g~t~L 61 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELM---------------------------EVAPFISGDGHLLHRYDHHGRQCT 61 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHH---------------------------HHHHHHhhcchhhhccCCCCCcHH
Confidence 45555556666666666666665553322 345566777888899999999999
Q ss_pred HHHHHhCcHH---HHHHHHHCCCCCCCCC-CCCCChHHHHHHcCCHHHHHHHHh-ccccccccCCCCCccccccC
Q 006072 515 HVAASEGLYL---MAKLLVEAGASVFPKD-RWGNTPLDEGRMCGNKNLIKLLED-AKSTQLLEFPHGFQDTADKR 584 (662)
Q Consensus 515 ~~A~~~~~~~---~v~~Ll~~ga~~~~~d-~~g~tpl~~A~~~~~~~iv~~Ll~-~ga~~~~~~~~~~~~~~~~~ 584 (662)
|+|+..|+.+ ++++|+++|+++|.+| ..|.||||+|+..|+.+++++|++ .|++....+..|.++...+.
T Consensus 62 h~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~ 136 (166)
T PHA02743 62 HMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAY 136 (166)
T ss_pred HHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHH
Confidence 9999998765 4899999999999998 589999999999999999999995 89999999998988876443
No 60
>PHA02741 hypothetical protein; Provisional
Probab=99.87 E-value=2.1e-21 Score=178.23 Aligned_cols=137 Identities=18% Similarity=0.240 Sum_probs=115.6
Q ss_pred CCCCCCCCCcHHHHHHHcCcHHHHHHHHh------cCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccccch
Q 006072 406 PNRTDYDGRSPLHLAASRGYEEIMTFLIQ------KGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGS 479 (662)
Q Consensus 406 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 479 (662)
++.++..|.||||+|+..|+.++++.|+. .|++++.+|..|.||||+|+..|+.+++
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~----------------- 76 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLA----------------- 76 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHH-----------------
Confidence 34567789999999999999999988753 3678888888899999988887775432
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHhCcHHHHHHHHH-CCCCCCCCCCCCCChHHHHHHcCCHH
Q 006072 480 FLCTAVARGDSDLLKRVLSNGIDPNTRDY-DLRTPLHVAASEGLYLMAKLLVE-AGASVFPKDRWGNTPLDEGRMCGNKN 557 (662)
Q Consensus 480 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~ 557 (662)
.+++++|+++|+++|.++. .|+||||+|+..++.+++++|++ .|++++..|..|+||||+|+..++.+
T Consensus 77 ----------~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~ 146 (169)
T PHA02741 77 ----------AEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVA 146 (169)
T ss_pred ----------HHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHH
Confidence 2556677777888888885 89999999999999999999997 59999999999999999999999999
Q ss_pred HHHHHHhccccc
Q 006072 558 LIKLLEDAKSTQ 569 (662)
Q Consensus 558 iv~~Ll~~ga~~ 569 (662)
++++|++.++..
T Consensus 147 iv~~L~~~~~~~ 158 (169)
T PHA02741 147 MMQILREIVATS 158 (169)
T ss_pred HHHHHHHHHHHh
Confidence 999999987663
No 61
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.86 E-value=1e-20 Score=185.63 Aligned_cols=154 Identities=24% Similarity=0.242 Sum_probs=126.2
Q ss_pred CCCCCCCCc-HHHHHHHcCcHHHHHHHHhcCCCCcccC----CCCCcHHHHHHHhCCHHHHHHHHHcCCCCccc---ccc
Q 006072 407 NRTDYDGRS-PLHLAASRGYEEIMTFLIQKGVDINLKD----NFGNTPLLEAIKYGNDGAASLLVKEGASLNVE---EAG 478 (662)
Q Consensus 407 ~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~----~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~---~~~ 478 (662)
..+|..|.| +||.|+..|+.+++++|+++|+++|.++ ..|.||||+|+..++.+++++|+++|++++.. .|.
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~ 105 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI 105 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence 345555654 5566667788888888888888888763 57888999998888888999999888888863 377
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHH
Q 006072 479 SFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNL 558 (662)
Q Consensus 479 ~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~i 558 (662)
||||.|+..++.+++++|+++|++++.+|..|.||||+|+..++.+++.++. |+. .+..+.+|++++ ++.|+
T Consensus 106 TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~---~n~ei 177 (300)
T PHA02884 106 TPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYKHPKKIL---INFDI 177 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc---ccccccChhhhh---ccHHH
Confidence 8999999999999999999999999999999999999999999998886665 322 456678898875 47999
Q ss_pred HHHHHhcccc
Q 006072 559 IKLLEDAKST 568 (662)
Q Consensus 559 v~~Ll~~ga~ 568 (662)
+++|++++.-
T Consensus 178 ~~~Lish~vl 187 (300)
T PHA02884 178 LKILVSHFIL 187 (300)
T ss_pred HHHHHHHHHH
Confidence 9999999883
No 62
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85 E-value=1.9e-21 Score=183.96 Aligned_cols=162 Identities=23% Similarity=0.350 Sum_probs=147.4
Q ss_pred ccccchhhhhhhhhHhHHhccCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHc-----CcHHHHHHHHhcCCCCcccC
Q 006072 370 TFHISKHEAELALKVNSAAYHGDLYQLEGLIRAG-ADPNRTDYDGRSPLHLAASR-----GYEEIMTFLIQKGVDINLKD 443 (662)
Q Consensus 370 ~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~-----~~~~~v~~Ll~~g~~~~~~~ 443 (662)
.+.+|-.|.+|+|+||+|+.++++++|+.||+.| +++|..|.-|.||+++|+.. .+.++|..|.+.| |+|.+-
T Consensus 258 ~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKA 336 (452)
T KOG0514|consen 258 EYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKA 336 (452)
T ss_pred HHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhh
Confidence 4566778899999999999999999999999997 68999999999999999864 4678999999987 788764
Q ss_pred -CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHH
Q 006072 444 -NFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSN-GIDPNTRDYDLRTPLHVAAS 519 (662)
Q Consensus 444 -~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 519 (662)
..|+|+|++|+.+|+.++|+.||..|+|+|.++ |.|+|++|+..|+.|++++||.. ++|+...|.+|.|+|.+|..
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAle 416 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALE 416 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHh
Confidence 579999999999999999999999999999864 88999999999999999999976 78999999999999999999
Q ss_pred hCcHHHHHHHHHC
Q 006072 520 EGLYLMAKLLVEA 532 (662)
Q Consensus 520 ~~~~~~v~~Ll~~ 532 (662)
.|+.++.-+|..+
T Consensus 417 agh~eIa~mlYa~ 429 (452)
T KOG0514|consen 417 AGHREIAVMLYAH 429 (452)
T ss_pred cCchHHHHHHHHH
Confidence 9999999888764
No 63
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.83 E-value=2e-20 Score=169.33 Aligned_cols=135 Identities=19% Similarity=0.198 Sum_probs=99.3
Q ss_pred CCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCC--C-----CcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccccc
Q 006072 406 PNRTDYDGRSPLHLAASRGYEEIMTFLIQKGV--D-----INLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAG 478 (662)
Q Consensus 406 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 478 (662)
++..|.+|.||||+||..|+. +.++...+. + ++..|..|.||||+|+..|+.+.+
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~---------------- 71 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQ---------------- 71 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHH----------------
Confidence 345566777777777777763 233322211 1 233456666666666665544321
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHhCcHHHHHHHHH-CCCCCCCCCCCCCChHHHHHHcCCH
Q 006072 479 SFLCTAVARGDSDLLKRVLSNGIDPNTRD-YDLRTPLHVAASEGLYLMAKLLVE-AGASVFPKDRWGNTPLDEGRMCGNK 556 (662)
Q Consensus 479 ~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~ 556 (662)
+++++|+++|+++|.++ ..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.
T Consensus 72 ------------e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~ 139 (154)
T PHA02736 72 ------------EKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDA 139 (154)
T ss_pred ------------HHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCH
Confidence 34667777788888887 489999999999999999999997 4899999999999999999999999
Q ss_pred HHHHHHHhcccccc
Q 006072 557 NLIKLLEDAKSTQL 570 (662)
Q Consensus 557 ~iv~~Ll~~ga~~~ 570 (662)
+++++|+++|++..
T Consensus 140 ~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 140 KMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHHHHcCCCCC
Confidence 99999999998754
No 64
>PHA02741 hypothetical protein; Provisional
Probab=99.83 E-value=5.9e-20 Score=168.58 Aligned_cols=134 Identities=28% Similarity=0.297 Sum_probs=113.1
Q ss_pred cchhhhhhhhhHhHHhccCCHHHHHHHHH------cCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHhcCCCCccc
Q 006072 373 ISKHEAELALKVNSAAYHGDLYQLEGLIR------AGADPNRTDYDGRSPLHLAASRGY----EEIMTFLIQKGVDINLK 442 (662)
Q Consensus 373 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~ 442 (662)
++..+..|.|+||.|+..|+.++++.|+. .|++++.+|..|.||||+|+..|+ .+++++|+++|+++|.+
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~ 93 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ 93 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC
Confidence 34556788999999999999999999854 368899999999999999999999 58899999999999998
Q ss_pred CC-CCCcHHHHHHHhCCHHHHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhC
Q 006072 443 DN-FGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEG 521 (662)
Q Consensus 443 ~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 521 (662)
+. .|.||||+|+..++.+++++|++. .|++++..|..|.||||.|+..+
T Consensus 94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~------------------------------~g~~~~~~n~~g~tpL~~A~~~~ 143 (169)
T PHA02741 94 EMLEGDTALHLAAHRRDHDLAEWLCCQ------------------------------PGIDLHFCNADNKSPFELAIDNE 143 (169)
T ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHhC------------------------------CCCCCCcCCCCCCCHHHHHHHCC
Confidence 85 899999999988888877777753 23466677788888888888888
Q ss_pred cHHHHHHHHHCCCCC
Q 006072 522 LYLMAKLLVEAGASV 536 (662)
Q Consensus 522 ~~~~v~~Ll~~ga~~ 536 (662)
+.+++++|++.++..
T Consensus 144 ~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 144 DVAMMQILREIVATS 158 (169)
T ss_pred CHHHHHHHHHHHHHh
Confidence 888888888876554
No 65
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.82 E-value=8.6e-20 Score=154.87 Aligned_cols=143 Identities=31% Similarity=0.307 Sum_probs=116.2
Q ss_pred hhhHhHHhccCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCH
Q 006072 381 ALKVNSAAYHGDLYQLEGLIRAGAD-PNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGND 459 (662)
Q Consensus 381 ~~~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 459 (662)
.-.+.+|+..+.+..|+.||+..++ +|.+|.+|.||||.|+.+|+.+|++.|+..|++++.+...|+||||-||..++.
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~ 143 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNF 143 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccch
Confidence 3457789999999999999988776 899999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcH-HHHHHHH-HCCCCCC
Q 006072 460 GAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLY-LMAKLLV-EAGASVF 537 (662)
Q Consensus 460 ~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll-~~ga~~~ 537 (662)
+++-.|+++|+| +|.......||||.||...+. ..+++|+ ..+.++.
T Consensus 144 ~va~~LLqhgaD-------------------------------VnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg 192 (228)
T KOG0512|consen 144 EVAGRLLQHGAD-------------------------------VNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPG 192 (228)
T ss_pred hHHHHHHhccCc-------------------------------ccccccccchhhHHhhcccchHHHHHHHhhccccChh
Confidence 888877777665 455555667788877766543 4455554 3567777
Q ss_pred CCCCCCCChHHHHHHcC
Q 006072 538 PKDRWGNTPLDEGRMCG 554 (662)
Q Consensus 538 ~~d~~g~tpl~~A~~~~ 554 (662)
..+..+.||+++|.+.+
T Consensus 193 ~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 193 LKNNLEETAFDIARRTS 209 (228)
T ss_pred hhcCccchHHHHHHHhh
Confidence 77888888888887665
No 66
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.82 E-value=1.8e-19 Score=176.78 Aligned_cols=129 Identities=22% Similarity=0.219 Sum_probs=115.4
Q ss_pred CcccCCCCCc-HHHHHHHhCCHHHHHHHHHcCCCCccc------ccchHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCC
Q 006072 439 INLKDNFGNT-PLLEAIKYGNDGAASLLVKEGASLNVE------EAGSFLCTAVARGDSDLLKRVLSNGIDPNTR-DYDL 510 (662)
Q Consensus 439 ~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g 510 (662)
+..+|..|.| |||.|+..|+.+++++|+++|++++.. .|.||||.|+..++.+++++|+++|+++|.. +..|
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g 104 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK 104 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCC
Confidence 3456777776 566677779999999999999999875 5889999999999999999999999999986 4689
Q ss_pred CcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccc
Q 006072 511 RTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKS 567 (662)
Q Consensus 511 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga 567 (662)
.||||.|+..|+.+++++|+++||+++.+|..|.||||+|+..++.+++.++..++.
T Consensus 105 ~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~~ 161 (300)
T PHA02884 105 ITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDNEI 161 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999999999877765443
No 67
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.81 E-value=6.6e-20 Score=165.95 Aligned_cols=133 Identities=26% Similarity=0.319 Sum_probs=106.4
Q ss_pred cchhhhhhhhhHhHHhccCCHHHHHHHHHcCC--C-----CCCCCCCCCcHHHHHHHcCcH---HHHHHHHhcCCCCccc
Q 006072 373 ISKHEAELALKVNSAAYHGDLYQLEGLIRAGA--D-----PNRTDYDGRSPLHLAASRGYE---EIMTFLIQKGVDINLK 442 (662)
Q Consensus 373 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~--~-----~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~~~ 442 (662)
.+..+..|.||||+||..|+.. ..+...+. + ++.+|..|.||||+|+..|+. +++++|+++|++++.+
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~ 87 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK 87 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence 4556778999999999999843 33332222 2 334688999999999999987 4688999999999999
Q ss_pred C-CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhC
Q 006072 443 D-NFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEG 521 (662)
Q Consensus 443 ~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 521 (662)
+ ..|.||||+|+..++.+++++|++. .|++++.+|..|.||||+|+..|
T Consensus 88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~------------------------------~g~d~n~~~~~g~tpL~~A~~~~ 137 (154)
T PHA02736 88 ERVFGNTPLHIAVYTQNYELATWLCNQ------------------------------PGVNMEILNYAFKTPYYVACERH 137 (154)
T ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhC------------------------------CCCCCccccCCCCCHHHHHHHcC
Confidence 8 4899999999988887777777653 24567778888999999999999
Q ss_pred cHHHHHHHHHCCCCCC
Q 006072 522 LYLMAKLLVEAGASVF 537 (662)
Q Consensus 522 ~~~~v~~Ll~~ga~~~ 537 (662)
+.+++++|+++|++.+
T Consensus 138 ~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 138 DAKMMNILRAKGAQCK 153 (154)
T ss_pred CHHHHHHHHHcCCCCC
Confidence 9999999999998875
No 68
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.81 E-value=2.9e-19 Score=187.41 Aligned_cols=236 Identities=21% Similarity=0.278 Sum_probs=183.3
Q ss_pred hhHhHHhccCCHHHHHHHHHcC---------CCCCCCCCCCCcHHHHHHHc---CcHHHHHHHHhcCCC-Ccc----cCC
Q 006072 382 LKVNSAAYHGDLYQLEGLIRAG---------ADPNRTDYDGRSPLHLAASR---GYEEIMTFLIQKGVD-INL----KDN 444 (662)
Q Consensus 382 ~~L~~A~~~g~~~~v~~Ll~~g---------~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~-~~~----~~~ 444 (662)
.++..|...|.++.+..+++.+ .+++.+...|.|+||.|..+ ++.++++.|++.-.. +|. ...
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY 182 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY 182 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence 5677888888888888888765 55777778899999999874 556899999985322 121 234
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCccc-------------------------ccchHHHHHHHcCCHHHHHHHHHc
Q 006072 445 FGNTPLLEAIKYGNDGAASLLVKEGASLNVE-------------------------EAGSFLCTAVARGDSDLLKRVLSN 499 (662)
Q Consensus 445 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-------------------------~~~~~l~~A~~~~~~~~v~~Ll~~ 499 (662)
.|.||||+|+.+.+.++|++|++.|||++.+ -|+.||..||..++.+++++|+++
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence 6999999999999999999999999998762 145699999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCC--CCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCC
Q 006072 500 GIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGAS--VFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGF 577 (662)
Q Consensus 500 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~--~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~ 577 (662)
|+|++.+|..|+|.||..+..-..++..+++++|++ ...+|..|.|||.+|++.|+.++.+.+++.........+.
T Consensus 263 gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YGp-- 340 (782)
T KOG3676|consen 263 GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYGP-- 340 (782)
T ss_pred CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeecc--
Confidence 999999999999999999999999999999999999 8899999999999999999999999999985333333221
Q ss_pred ccccccCCCCCcccccCCCCCCccc-c----------cccceEEEcCCcHHHHHHHHHhHcCC
Q 006072 578 QDTADKRNPTRKCTVFPFHPWDAKE-S----------RRHGIVLWIPQNIKDLIKTAAEQLDF 629 (662)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~l~~~~~el~~~~~~~~~~ 629 (662)
..++.+|+..-|.-. . .....+..+.+-++++++...+.|+-
T Consensus 341 ----------vtsslYpL~~iDT~~n~~SvLeivvyg~~~eHl~Ll~~~i~~LL~~KW~~f~k 393 (782)
T KOG3676|consen 341 ----------VTSSLYPLNSIDTIGNENSVLEIVVYGIKNEHLELLDGPIEELLEDKWKAFGK 393 (782)
T ss_pred ----------cccccccchhcccccchhhhhhhhhcCCcHHHHHHHhHHHHHHHHHHHHHHhH
Confidence 223333333222220 0 11122234455678888888777653
No 69
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.7e-19 Score=165.40 Aligned_cols=135 Identities=30% Similarity=0.383 Sum_probs=99.2
Q ss_pred CCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcH
Q 006072 436 GVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTP 513 (662)
Q Consensus 436 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 513 (662)
..|.|.-|..|.+|||+||+.|+..+++.|+..|+.+|..+ ..||||+|+..|+.++|+.|++..+|+|..+..|+||
T Consensus 24 ehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntp 103 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTP 103 (448)
T ss_pred ccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCc
Confidence 34455555555666666666666666666666665555543 3456666666666677777777778899999999999
Q ss_pred HHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhcccccc
Q 006072 514 LHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQL 570 (662)
Q Consensus 514 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~ 570 (662)
||+||..|...+++-|+..||-+++.|++|.|||+.|.-.-...+.+.-.++|-+++
T Consensus 104 lhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 104 LHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred hhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999998865444445555556676665
No 70
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.77 E-value=3.7e-19 Score=188.84 Aligned_cols=204 Identities=24% Similarity=0.262 Sum_probs=138.9
Q ss_pred hhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCccc-CCCCCcHHHHH
Q 006072 375 KHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLK-DNFGNTPLLEA 453 (662)
Q Consensus 375 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A 453 (662)
..+....|+|-.||..|+-|.++.|+.+|+++..+|+.|.+||.+|+-.||..+|+.|+++.++++.. |..+.|+|.+|
T Consensus 752 ~Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSla 831 (2131)
T KOG4369|consen 752 LTEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLA 831 (2131)
T ss_pred ccCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEe
Confidence 34556678999999999999999999999999999999999999999999999999998888887754 56677888888
Q ss_pred HHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHHcCCCCCCCC--CCCCcHHHHHHHhCcHHHHHHH
Q 006072 454 IKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRD--YDLRTPLHVAASEGLYLMAKLL 529 (662)
Q Consensus 454 ~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~v~~L 529 (662)
|..|+.++|++||..|++-..++ ..|||.+|..-|..++++.|+.+|+.+|.+. +.|-.||+.|..+|+.+.++.|
T Consensus 832 csggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~l 911 (2131)
T KOG4369|consen 832 CSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSL 911 (2131)
T ss_pred cCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHH
Confidence 88888888888888777654433 4466666666666666666666666665543 4555666666665555555555
Q ss_pred HHCCCCCCCCC-CCCCChHHHHHHcCCHHHHHHHHhccccccccCCCCCc
Q 006072 530 VEAGASVFPKD-RWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQ 578 (662)
Q Consensus 530 l~~ga~~~~~d-~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 578 (662)
++.|-|+|..- .+-+|+|-+|+-.|..|++.+||.+.+....+.+.|.+
T Consensus 912 l~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktglt 961 (2131)
T KOG4369|consen 912 LQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLT 961 (2131)
T ss_pred hcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCc
Confidence 55555554331 22344444444444444444444444444444444333
No 71
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.76 E-value=3.3e-19 Score=189.21 Aligned_cols=216 Identities=24% Similarity=0.219 Sum_probs=192.6
Q ss_pred CCcchhhhhhhcCccccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHcCcHHHHHHHH
Q 006072 355 GKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNR-TDYDGRSPLHLAASRGYEEIMTFLI 433 (662)
Q Consensus 355 ~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll 433 (662)
.++.+.+..++.... ++.-+|..|.+||..|+..|+..+|+.|+++.++++. .|..+.|+|.+||..|+.++|++||
T Consensus 767 ggh~e~vellv~rga--niehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl 844 (2131)
T KOG4369|consen 767 GGHREEVELLVVRGA--NIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLL 844 (2131)
T ss_pred CccHHHHHHHHHhcc--cccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHH
Confidence 344444444443322 3455678889999999999999999999999999876 4788999999999999999999999
Q ss_pred hcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccc----cchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-C
Q 006072 434 QKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE----AGSFLCTAVARGDSDLLKRVLSNGIDPNTRD-Y 508 (662)
Q Consensus 434 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~----~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~ 508 (662)
.+|++-..++....|||.+|...|..++++.|+.+|+.++.+. |-.||++|..+|+.+.++.|++.|.|+|..- .
T Consensus 845 ~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeT 924 (2131)
T KOG4369|consen 845 NAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIET 924 (2131)
T ss_pred HhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhcccccc
Confidence 9999999999999999999999999999999999999998865 4589999999999999999999999998754 6
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhcccccccc
Q 006072 509 DLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLE 572 (662)
Q Consensus 509 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~ 572 (662)
+.+|+|-+|+-.|+.++|.+||.+.+++..+-+.|.|||+-++..|..|+-++|+.+|||.+..
T Consensus 925 NrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nas 988 (2131)
T KOG4369|consen 925 NRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNAS 988 (2131)
T ss_pred ccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccC
Confidence 7889999999999999999999999999999999999999999999999999999999998754
No 72
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.74 E-value=1.3e-17 Score=141.79 Aligned_cols=133 Identities=23% Similarity=0.181 Sum_probs=103.9
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCC-CcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccccchHHHHHHHcCCHHHHH
Q 006072 416 PLHLAASRGYEEIMTFLIQKGVD-INLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLK 494 (662)
Q Consensus 416 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~ 494 (662)
.+.+|+..+....|+.|++..++ +|.+|.+|.||||-|+.+|+.++|+.|+..
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~-------------------------- 119 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLS-------------------------- 119 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHc--------------------------
Confidence 45678888888888888876665 788888888888888777776666665555
Q ss_pred HHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHH-HHHHHH-hcccccccc
Q 006072 495 RVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKN-LIKLLE-DAKSTQLLE 572 (662)
Q Consensus 495 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~-iv~~Ll-~~ga~~~~~ 572 (662)
|++++.+...|+||||-||..++.+++..||++|||+|.......||||+|+...+.. .+.+|+ +.+.++-..
T Consensus 120 -----gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~ 194 (228)
T KOG0512|consen 120 -----GANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLK 194 (228)
T ss_pred -----cCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhh
Confidence 5567788899999999999999999999999999999999999999999999988754 455554 445555555
Q ss_pred CCCCCcc
Q 006072 573 FPHGFQD 579 (662)
Q Consensus 573 ~~~~~~~ 579 (662)
...+-++
T Consensus 195 nn~eeta 201 (228)
T KOG0512|consen 195 NNLEETA 201 (228)
T ss_pred cCccchH
Confidence 5444333
No 73
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.73 E-value=3.2e-17 Score=133.28 Aligned_cols=85 Identities=35% Similarity=0.450 Sum_probs=38.4
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHH
Q 006072 482 CTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKL 561 (662)
Q Consensus 482 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~ 561 (662)
|.|+..|+.+++++|++.+.+++. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+++++
T Consensus 2 ~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 77 (89)
T PF12796_consen 2 HIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKL 77 (89)
T ss_dssp HHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 444444444444444444444433 4444444444444444444444444444444444444444444444444444
Q ss_pred HHhcccccc
Q 006072 562 LEDAKSTQL 570 (662)
Q Consensus 562 Ll~~ga~~~ 570 (662)
|+++|+++.
T Consensus 78 Ll~~g~~~~ 86 (89)
T PF12796_consen 78 LLEHGADVN 86 (89)
T ss_dssp HHHTTT-TT
T ss_pred HHHcCCCCC
Confidence 444444443
No 74
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.72 E-value=3.4e-17 Score=133.10 Aligned_cols=89 Identities=35% Similarity=0.472 Sum_probs=83.7
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHH
Q 006072 450 LLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLL 529 (662)
Q Consensus 450 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 529 (662)
||+|+..|+.+++++|++.+.+++. |.+|||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~--~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 78 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL--GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLL 78 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS--SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC--CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 7999999999999999999998887 88999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCC
Q 006072 530 VEAGASVFPKD 540 (662)
Q Consensus 530 l~~ga~~~~~d 540 (662)
+++|++++.+|
T Consensus 79 l~~g~~~~~~n 89 (89)
T PF12796_consen 79 LEHGADVNIRN 89 (89)
T ss_dssp HHTTT-TTSS-
T ss_pred HHcCCCCCCcC
Confidence 99999999876
No 75
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.71 E-value=3.6e-17 Score=150.20 Aligned_cols=107 Identities=32% Similarity=0.429 Sum_probs=78.9
Q ss_pred CccccccchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCC
Q 006072 367 SDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFG 446 (662)
Q Consensus 367 ~d~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 446 (662)
.+.+.+.+..|..|.+|||+||+.|+..+++.|+.+|+.+|..+....||||+|+..||.++|+.|++..+|+|..+..|
T Consensus 21 d~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehg 100 (448)
T KOG0195|consen 21 DDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHG 100 (448)
T ss_pred cCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccC
Confidence 34555566667777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCc
Q 006072 447 NTPLLEAIKYGNDGAASLLVKEGASLN 473 (662)
Q Consensus 447 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 473 (662)
+||||+||..|...+++-|+..|+.++
T Consensus 101 ntplhyacfwgydqiaedli~~ga~v~ 127 (448)
T KOG0195|consen 101 NTPLHYACFWGYDQIAEDLISCGAAVN 127 (448)
T ss_pred CCchhhhhhhcHHHHHHHHHhccceee
Confidence 777777777777777776666665443
No 76
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.69 E-value=3.1e-16 Score=164.91 Aligned_cols=184 Identities=23% Similarity=0.257 Sum_probs=153.0
Q ss_pred cccchhhhhhhhhHhHHhcc---CCHHHHHHHHHcCCC-CCC----CCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCccc
Q 006072 371 FHISKHEAELALKVNSAAYH---GDLYQLEGLIRAGAD-PNR----TDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLK 442 (662)
Q Consensus 371 ~~~~~~~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~-~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 442 (662)
-.++.....|.|.||.|..+ ++-++++.|++.-.. +|. ....|.||||.|+.+.+.++|++|++.|||++++
T Consensus 134 w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aR 213 (782)
T KOG3676|consen 134 WKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHAR 213 (782)
T ss_pred hccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhH
Confidence 34556678899999999983 456889999986433 222 2367999999999999999999999999998754
Q ss_pred ---------C--------------CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHH
Q 006072 443 ---------D--------------NFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVL 497 (662)
Q Consensus 443 ---------~--------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll 497 (662)
| -.|..||.+||..++++++++|+++|||++.+| |+|.||..+..-..++..+++
T Consensus 214 a~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L 293 (782)
T KOG3676|consen 214 ACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLAL 293 (782)
T ss_pred hhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHH
Confidence 1 137899999999999999999999999999876 889999999999999999999
Q ss_pred HcCCC--CCCCCCCCCcHHHHHHHhCcHHHHHHHHHC-C-------------CCCCCCCC--CCCChHHHHHHcC
Q 006072 498 SNGID--PNTRDYDLRTPLHVAASEGLYLMAKLLVEA-G-------------ASVFPKDR--WGNTPLDEGRMCG 554 (662)
Q Consensus 498 ~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g-------------a~~~~~d~--~g~tpl~~A~~~~ 554 (662)
++|++ ...+|..|-|||.+|+..|+.++.+.+++. . -+++..|. +-.+.|.+.+...
T Consensus 294 ~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YGpvtsslYpL~~iDT~~n~~SvLeivvyg~ 368 (782)
T KOG3676|consen 294 ELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYGPVTSSLYPLNSIDTIGNENSVLEIVVYGI 368 (782)
T ss_pred hcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeecccccccccchhcccccchhhhhhhhhcCC
Confidence 99999 889999999999999999999999999987 1 23344443 3456777776654
No 77
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.69 E-value=6.6e-16 Score=134.56 Aligned_cols=123 Identities=46% Similarity=0.654 Sum_probs=91.3
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccccchHHHHHHHcCC
Q 006072 410 DYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGD 489 (662)
Q Consensus 410 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~ 489 (662)
|.+|.||||+|+..++.+++++|++.|.+.+..+..|.||+|.|+..++.+++++|++
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~---------------------- 61 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE---------------------- 61 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHH----------------------
Confidence 4556666666666666666666666666655566666666666665555555555544
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHH
Q 006072 490 SDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLE 563 (662)
Q Consensus 490 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll 563 (662)
.|++++..+..|.||+|.|+..++.+++++|+++|.+++..|..|.||+++|...++.+++++|+
T Consensus 62 ---------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 62 ---------KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred ---------cCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 45566677778889999999999999999999999888888888999999999999999888874
No 78
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.66 E-value=1.9e-15 Score=131.57 Aligned_cols=123 Identities=46% Similarity=0.650 Sum_probs=107.2
Q ss_pred hhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHh
Q 006072 377 EAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKY 456 (662)
Q Consensus 377 ~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 456 (662)
+..|.||||.|+..|+.++++.|++.|.+.+..+..|.||||.|+..++.+++++|++.|++++..+..|.||+|+|+..
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN 83 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 46688999999999999999999999999899999999999999999999999999999999999999999999999998
Q ss_pred CCHHHHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHH
Q 006072 457 GNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLV 530 (662)
Q Consensus 457 ~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 530 (662)
++.+++++|++.|. +++..+..|.||++.|...++.+++++|+
T Consensus 84 ~~~~~~~~L~~~~~-------------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 84 GNLDVVKLLLKHGA-------------------------------DVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred CcHHHHHHHHHcCC-------------------------------CCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 88888888877763 45556666777777777777777777663
No 79
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]
Probab=99.66 E-value=2.8e-16 Score=157.25 Aligned_cols=124 Identities=20% Similarity=0.274 Sum_probs=101.2
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceEEeeccCCC
Q 006072 14 EAVRYLLWIRLYRVRKVSQFFHKMEKD-IRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGD 92 (662)
Q Consensus 14 ~~~~~lrl~rllRl~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~~~~~w~~~~~~~~ 92 (662)
.++|++|++|++|++|+.|....++.. ..+......+.-+++++.+-+-+||.+-|++...++...
T Consensus 308 ~vvrvlR~lRI~RI~KLaRhS~GLr~lg~Tlr~S~~ElglLllfL~~GI~iFStlvY~~Ek~~~~~~------------- 374 (477)
T KOG3713|consen 308 LVVRVLRVLRILRIFKLARHSTGLRTLGLTLRRSYRELGLLLLFLAVGIVIFSTLVYFAEKDEPDTK------------- 374 (477)
T ss_pred hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC-------------
Confidence 468999999999999999999998876 445555656777777777777888998888876544321
Q ss_pred CCcchhhccchHHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 93 YSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 93 ~~~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
|+.-..++||+++|||||||||++|.|..+++++..+++.|+++.|+.|..|.+-+..
T Consensus 375 -----------FtSIPa~~WWaiVTMTTVGYGDm~P~T~~Gklvas~cil~GVLvlAlPItiIv~nF~~ 432 (477)
T KOG3713|consen 375 -----------FTSIPAGFWWAVVTMTTVGYGDMVPVTVLGKLVASLCILCGVLVLALPITIIVNNFSM 432 (477)
T ss_pred -----------CccccchhheeeEEEeeecccCccccccchHHHHHHHHHHhHHHhhcchHhHhhhHHH
Confidence 2345669999999999999999999999999999999999999999999877665544
No 80
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.58 E-value=5.7e-15 Score=111.89 Aligned_cols=98 Identities=26% Similarity=0.213 Sum_probs=46.5
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCccc-ccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHH
Q 006072 450 LLEAIKYGNDGAASLLVKEGASLNVE-EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKL 528 (662)
Q Consensus 450 L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 528 (662)
+.|++++|..+-|+-.+..|.++|.. .|++|||+|+..|..+++++|+..|++++.+|+.|-|||.-|+..|+.++|++
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn~~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVkl 85 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVNEIYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKL 85 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHHHHhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHH
Confidence 34445555555555554444444332 23444444444444444444444444444444444444444444444444444
Q ss_pred HHHCCCCCCCCCCCCCChH
Q 006072 529 LVEAGASVFPKDRWGNTPL 547 (662)
Q Consensus 529 Ll~~ga~~~~~d~~g~tpl 547 (662)
||+.|||-.....+|.+.+
T Consensus 86 LL~~GAdrt~~~PdG~~~~ 104 (117)
T KOG4214|consen 86 LLQNGADRTIHAPDGTALI 104 (117)
T ss_pred HHHcCcccceeCCCchhHH
Confidence 4444444444444444433
No 81
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.57 E-value=1.6e-14 Score=109.56 Aligned_cols=100 Identities=29% Similarity=0.423 Sum_probs=91.4
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHH
Q 006072 480 FLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLI 559 (662)
Q Consensus 480 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv 559 (662)
-+.+++++|..+-|+-....|.++|..- .|+||||+|+..|..+++++|+..||+++.+|+.|-|||--|+..||.++|
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 3568899999999999999998888654 799999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccccCCCCCccc
Q 006072 560 KLLEDAKSTQLLEFPHGFQDT 580 (662)
Q Consensus 560 ~~Ll~~ga~~~~~~~~~~~~~ 580 (662)
++|++.||+.....+.|..-.
T Consensus 84 klLL~~GAdrt~~~PdG~~~~ 104 (117)
T KOG4214|consen 84 KLLLQNGADRTIHAPDGTALI 104 (117)
T ss_pred HHHHHcCcccceeCCCchhHH
Confidence 999999999999988876543
No 82
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.56 E-value=6.7e-14 Score=136.12 Aligned_cols=135 Identities=41% Similarity=0.558 Sum_probs=115.8
Q ss_pred CCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccccchHHHHHH
Q 006072 406 PNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAV 485 (662)
Q Consensus 406 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~ 485 (662)
....+..+.+++|.|+..+..+++++++..|++++..+..|.||||+|+..++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~-------------------------- 119 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNP-------------------------- 119 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCc--------------------------
Confidence 345566788999999999999999999999999999999999999999998883
Q ss_pred HcCCHHHHHHHHHcCC---CCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHH
Q 006072 486 ARGDSDLLKRVLSNGI---DPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLL 562 (662)
Q Consensus 486 ~~~~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~L 562 (662)
..++.++++.|++.|+ +.+.+|..|.||||+|+..|+.+++++|++.|++++..+..|.||++.|+..++.++++.+
T Consensus 120 ~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 199 (235)
T COG0666 120 PEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLL 199 (235)
T ss_pred ccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHH
Confidence 2233444555555555 5666799999999999999999999999999999999999999999999999999999999
Q ss_pred Hhcc
Q 006072 563 EDAK 566 (662)
Q Consensus 563 l~~g 566 (662)
++.+
T Consensus 200 ~~~~ 203 (235)
T COG0666 200 LDKG 203 (235)
T ss_pred HhcC
Confidence 9987
No 83
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=99.56 E-value=5.5e-14 Score=137.13 Aligned_cols=127 Identities=20% Similarity=0.263 Sum_probs=118.3
Q ss_pred HHHhcccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccch
Q 006072 227 LPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV 306 (662)
Q Consensus 227 ~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~ 306 (662)
...++.+|+|..++++.+..+....+.+.|++|+.|+++|+..+.+|+|.+|.|+++... +|++..+..+.+|++||+.
T Consensus 6 ~~~l~~~~~f~~L~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~-~~~~~~i~~~~~g~~~g~~ 84 (236)
T PRK09392 6 LIRLRNLPLFADMADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASS-QDRETTLAILRPVSTFILA 84 (236)
T ss_pred HHHHhcCccccCCCHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcC-CCceEEEEEeCCCchhhhH
Confidence 357789999999999999999999999999999999999999999999999999999754 5667889999999999999
Q ss_pred hhhccCCccceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHHHHhc
Q 006072 307 SILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQ 354 (662)
Q Consensus 307 ~~l~~~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~ 354 (662)
+++.+.++.++++|.++|+++.+++++|.+++..+|.....++..+.+
T Consensus 85 ~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~~~~~~l~~ 132 (236)
T PRK09392 85 AVVLDAPYLMSARTLTRSRVLMIPAELVREAMSEDPGFMRAVVFELAG 132 (236)
T ss_pred HHhCCCCCceEEEEcCceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998888877754
No 84
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=99.53 E-value=1.2e-13 Score=118.03 Aligned_cols=114 Identities=32% Similarity=0.550 Sum_probs=107.3
Q ss_pred cccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCc
Q 006072 235 LFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQ 314 (662)
Q Consensus 235 ~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~ 314 (662)
+|..++++.+..++..++.+.|.+|++|+.+|+..+.+|+|.+|.+.++....+|++..+..+.+|++||+..++.+.++
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~ 80 (115)
T cd00038 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIVGFLGPGDLFGELALLGNGPR 80 (115)
T ss_pred CcccCCHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEecCCccCcChHHHhcCCCC
Confidence 57889999999999999999999999999999999999999999999998888888889999999999999999988999
Q ss_pred cceEEEccceeEEEecHHHHHHHHHHhhhcHHHH
Q 006072 315 PYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKV 348 (662)
Q Consensus 315 ~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~i 348 (662)
..+++|.+.|.++.+++++|.+++..+|.....+
T Consensus 81 ~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 114 (115)
T cd00038 81 SATVRALTDSELLVLPRSDFRRLLQEYPELARRL 114 (115)
T ss_pred CceEEEcCceEEEEEeHHHHHHHHHHCcHhHHhc
Confidence 9999999999999999999999999998776654
No 85
>PF11834 DUF3354: Domain of unknown function (DUF3354); InterPro: IPR021789 Potassium channels take part in important processes of higher plants, including opening and closing of stomatal pores and leaf movement. Inward rectifying potassium (K(+)in) channels play an important role in turgor regulation and ion uptake in higher plants. All of them comprise, from their N-terminal to their C-terminal ends: a short hydrophilic region, a hydrophobic region structurally analogous and partially homologous to the transmembrane domain of voltage-gated animal channels from the Shaker superfamily, a putative cyclic nucleotide-binding domain, and a conserved C-terminal KHA domain. Between these last two regions, some of them (AKT1, AKT2 and SKT1) contain an ankyrin-repeat domain with six repeats homologous to those of human erythrocyte ankyrin. This entry represents the KHA domain which is unique to plant K(+)in channels. The KHA domain contains two high-homology blocks enriched for hydrophobic and acidic residues, respectively. The KHA domain is essential for interaction of plant K(+)in channels. The KHA domain mediates tetramerization and/or stabilisation of the heteromers [, , ].
Probab=99.51 E-value=5.5e-14 Score=103.21 Aligned_cols=68 Identities=38% Similarity=0.851 Sum_probs=62.7
Q ss_pred CcccccCCCCCCcccccccceEEEcCCcHHHHHHHHHhHcCCCCCcccccCCCceeeeeeeeecCCeEEEe
Q 006072 588 RKCTVFPFHPWDAKESRRHGIVLWIPQNIKDLIKTAAEQLDFRGGDCILSSEGGKILDVDMINDDQKLYLI 658 (662)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 658 (662)
+++++++.|++.. .+..|+++|+|++++||++.++++|+.. ++.+++++|++|+|+++|||||+||++
T Consensus 2 ~RVtI~~~~~~~~--~~~~GKvi~lP~SleeLl~ia~~kfg~~-~~~v~~~dgaeIdDI~~IRDgD~L~~~ 69 (69)
T PF11834_consen 2 KRVTIFPNHPPEK--GRRAGKVIWLPDSLEELLKIASEKFGFS-ATKVLNEDGAEIDDIDVIRDGDHLYLV 69 (69)
T ss_pred cEEEEecCCCCcc--cCcCCEEEEcCccHHHHHHHHHHHhCCC-ceEEEcCCCCEEeEEEEEEcCCEEEEC
Confidence 5678889999888 5667999999999999999999999996 699999999999999999999999984
No 86
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.49 E-value=2.7e-14 Score=103.59 Aligned_cols=55 Identities=40% Similarity=0.500 Sum_probs=33.6
Q ss_pred HHHcC-CCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHH
Q 006072 496 VLSNG-IDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEG 550 (662)
Q Consensus 496 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 550 (662)
|+++| +++|.+|..|.||||+||..|+.+++++|++.|+|++.+|..|+||+|+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56777 89999999999999999999999999999999999999999999999997
No 87
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=99.48 E-value=2.3e-13 Score=111.04 Aligned_cols=91 Identities=30% Similarity=0.576 Sum_probs=86.2
Q ss_pred ceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEEccceeEEEecHH
Q 006072 253 EEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRIDKQ 332 (662)
Q Consensus 253 ~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a~~~~~l~~l~~~ 332 (662)
++.|++|++|+++|+..+++|||.+|.+.++....+++...+..+.+|++||+.+++.+.++.++++|.++|+++.|+++
T Consensus 1 ~~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~~~ 80 (91)
T PF00027_consen 1 EKTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINEDGKEQIIFFLGPGDIFGEIELLTGKPSPFTVIALTDSEVLRIPRE 80 (91)
T ss_dssp -EEESTTEEEEETTSBESEEEEEEESEEEEEEETTTSEEEEEEEEETTEEESGHHHHHTSBBSSEEEESSSEEEEEEEHH
T ss_pred CeEECCCCEEEeCCCcCCEEEEEEECceEEEeceecceeeeecceeeeccccceeecCCCccEEEEEEccCEEEEEEeHH
Confidence 36899999999999999999999999999999888888888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh
Q 006072 333 SFTNIIDIYFC 343 (662)
Q Consensus 333 ~~~~~l~~~~~ 343 (662)
+|.++++++|+
T Consensus 81 ~~~~~~~~~p~ 91 (91)
T PF00027_consen 81 DFLQLLQQDPE 91 (91)
T ss_dssp HHHHHHHHSHH
T ss_pred HHHHHHHhCcC
Confidence 99999999984
No 88
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]
Probab=99.48 E-value=2.4e-13 Score=136.41 Aligned_cols=127 Identities=17% Similarity=0.191 Sum_probs=102.4
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceEEeeccCCCCC
Q 006072 15 AVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYS 94 (662)
Q Consensus 15 ~~~~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~~~~~w~~~~~~~~~~ 94 (662)
.+|-+|++.++|++|+.|....|.-....-+...+-+....++.|+.-+++..+.|++.....+.+.
T Consensus 197 alrslRFlQILRmlr~DRrggTWKLLGSvV~aH~~ELiTt~YIGFL~LIfsSflVYLaEKd~~~e~~------------- 263 (654)
T KOG1419|consen 197 ALRSLRFLQILRMLRMDRRGGTWKLLGSVVYAHSKELITTWYIGFLVLIFSSFLVYLAEKDAQGEGT------------- 263 (654)
T ss_pred hhhhhHHHHHHHHHHhhccCchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-------------
Confidence 5788899999999999998888876666666555666677777788888888888888654322111
Q ss_pred cchhhccchHHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 95 YADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIV 160 (662)
Q Consensus 95 ~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~ 160 (662)
.+-|..|.+|+||+++|+|||||||.+|+|..+++++.++.++|+.+||..-|.+++=+.
T Consensus 264 ------n~~F~TyADALWWG~ITltTIGYGDk~P~TWlGr~laa~fsligiSFFALPAGILGSGfA 323 (654)
T KOG1419|consen 264 ------NDEFPTYADALWWGVITLTTIGYGDKTPQTWLGRLLAACFSLIGISFFALPAGILGSGFA 323 (654)
T ss_pred ------cccchhHHHHHHhhheeEEeeccCCcCcccchhHHHHHHHHHHHHHHHhcccccccchhh
Confidence 112468999999999999999999999999999999999999999999999888877553
No 89
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.47 E-value=2.8e-13 Score=131.70 Aligned_cols=130 Identities=39% Similarity=0.528 Sum_probs=110.3
Q ss_pred cchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCc-----HHHHHHHHhcCC---CCcccCC
Q 006072 373 ISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGY-----EEIMTFLIQKGV---DINLKDN 444 (662)
Q Consensus 373 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-----~~~v~~Ll~~g~---~~~~~~~ 444 (662)
....+..+.++++.|+..++.+.++.++..|++++.++..|.||||+|+..++ .++++.|++.|+ +.+..|.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~ 145 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDE 145 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCC
Confidence 34445567899999999999999999999999999999999999999999999 999999999999 5666699
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHH
Q 006072 445 FGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYL 524 (662)
Q Consensus 445 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 524 (662)
.|.||||+|+..|+.+++++|++.|+ +++..+..|.|+++.|+..++.+
T Consensus 146 ~g~tpl~~A~~~~~~~~~~~ll~~~~-------------------------------~~~~~~~~g~t~l~~a~~~~~~~ 194 (235)
T COG0666 146 DGNTPLHWAALNGDADIVELLLEAGA-------------------------------DPNSRNSYGVTALDPAAKNGRIE 194 (235)
T ss_pred CCCchhHHHHHcCchHHHHHHHhcCC-------------------------------CCcccccCCCcchhhhcccchHH
Confidence 99999999999888888888877755 44555677777777777777777
Q ss_pred HHHHHHHCC
Q 006072 525 MAKLLVEAG 533 (662)
Q Consensus 525 ~v~~Ll~~g 533 (662)
+++.+++.+
T Consensus 195 ~~~~l~~~~ 203 (235)
T COG0666 195 LVKLLLDKG 203 (235)
T ss_pred HHHHHHhcC
Confidence 777777754
No 90
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=99.46 E-value=8.5e-13 Score=126.50 Aligned_cols=117 Identities=15% Similarity=0.258 Sum_probs=108.9
Q ss_pred CCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccC-Cccc
Q 006072 238 GCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNI-PQPY 316 (662)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~-~~~~ 316 (662)
.+|++.+..++..++.+.|++|++|+.+|+..+.+|||.+|.++++....+|++..+..+.+|++||+..++.+. ++.+
T Consensus 7 ~~~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~~~~ 86 (211)
T PRK11753 7 PQTDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSA 86 (211)
T ss_pred CCCHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehhhccCCCCceE
Confidence 579999999999999999999999999999999999999999999987888999999999999999999988864 6889
Q ss_pred eEEEccceeEEEecHHHHHHHHHHhhhcHHHHHHHHhc
Q 006072 317 TVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQ 354 (662)
Q Consensus 317 ~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~ 354 (662)
+++|.++|.++.+++++|.+++..+|.....++..+.+
T Consensus 87 ~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~ 124 (211)
T PRK11753 87 WVRAKTACEVAEISYKKFRQLIQVNPDILMALSAQMAR 124 (211)
T ss_pred EEEEcCcEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888777654
No 91
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]
Probab=99.45 E-value=9.4e-15 Score=138.51 Aligned_cols=121 Identities=21% Similarity=0.256 Sum_probs=82.5
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceEEeeccCCCC
Q 006072 14 EAVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDY 93 (662)
Q Consensus 14 ~~~~~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~~~~~w~~~~~~~~~ 93 (662)
..+|.+|++|++|++|++|..+.++-..+.-....+-+-++++++++ +.+.|.-+.+..+.++..+-
T Consensus 324 AILRViRLVRVFRIFKLSRHSkGLQILGqTl~aSmrElgLLIFFlfI----gviLFsSavYFAEade~~S~--------- 390 (507)
T KOG1545|consen 324 AILRVIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFI----GVILFSSAVYFAEADEPESH--------- 390 (507)
T ss_pred HHHHHHHHHHHhhheeeccccchHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHhceeeeeecCCCccC---------
Confidence 46788888888888888887777765544333334444444444443 33334333332222221111
Q ss_pred CcchhhccchHHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 94 SYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTA 157 (662)
Q Consensus 94 ~~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~ 157 (662)
|....+|||||++|||||||||+.|.|.+++++..++.+.|++..|..+-.|.+
T Consensus 391 ----------F~SIPdaFWwavVTMTTVGYGDm~P~TvgGKIVGslCAiaGVLTiALPVPVIVs 444 (507)
T KOG1545|consen 391 ----------FSSIPDAFWWAVVTMTTVGYGDMVPVTVGGKIVGSLCAIAGVLTIALPVPVIVS 444 (507)
T ss_pred ----------CCcCcccceEEEEEEEeeccccceecccCceehhhHHhhhhheEecccccEEEe
Confidence 223456999999999999999999999999999999999999999887765443
No 92
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=99.45 E-value=1.1e-12 Score=113.04 Aligned_cols=116 Identities=28% Similarity=0.421 Sum_probs=106.6
Q ss_pred cccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhh--ccC
Q 006072 235 LFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSIL--CNI 312 (662)
Q Consensus 235 ~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l--~~~ 312 (662)
+|.+++++.++.++..++.+.|.+|++|+++|+..+++|||.+|.+.++..+.+|++..+..+.+|++||+..++ ...
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~ 80 (120)
T smart00100 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLEDGREQILGILGPGDFFGELALLTNSRR 80 (120)
T ss_pred CcCCCCHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECCCCceEEEEeecCCceechhhhccCCCc
Confidence 578899999999999999999999999999999999999999999999988788888899999999999999988 356
Q ss_pred CccceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHH
Q 006072 313 PQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLT 350 (662)
Q Consensus 313 ~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~ 350 (662)
+...++.+.+.|.+..++.+++...+..++.....++.
T Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 118 (120)
T smart00100 81 AASATAVALELATLLRIDFRDFLQLLQENPQLLLELLL 118 (120)
T ss_pred ccceEEEEEeeEEEEccCHHHHHHHHHHhHHHHHHHHh
Confidence 78999999999999999999999999988877666554
No 93
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=99.44 E-value=2.4e-13 Score=129.99 Aligned_cols=127 Identities=27% Similarity=0.401 Sum_probs=116.0
Q ss_pred HHHHHhcccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCcccc
Q 006072 225 LYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFG 304 (662)
Q Consensus 225 ~~~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fG 304 (662)
.....+++.-+|.+++++...++...|.+..++.|+.|++||+.+|.+|+|.+|.++++. + ...+..+++|..||
T Consensus 119 ~L~~a~r~~~LF~~Ld~eq~~~v~dam~~~~v~~G~~Vi~qGdeGd~fYvI~kGt~dVyv---~--~~~v~~~~~g~sFG 193 (368)
T KOG1113|consen 119 RLEEAFRKNLLFANLDDEQLSQVLDAMFEKRVKAGETVIKQGDEGDNFYVIDKGTFDVYV---N--GTYVTTYSPGGSFG 193 (368)
T ss_pred HHHHHHHhccccccCCHHHHHHHHHhhceeeecCCcEEEecCCcCCcEEEEecceEEEEE---C--CeEEeeeCCCCchh
Confidence 345677788899999999999999999999999999999999999999999999999997 2 34678899999999
Q ss_pred chhhhccCCccceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHHHHhcCC
Q 006072 305 EVSILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQGK 356 (662)
Q Consensus 305 e~~~l~~~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~~~ 356 (662)
|.+++++.||.+|+.|.+++.++.+++..|..++-.+....++++...+++.
T Consensus 194 ElALmyn~PRaATv~a~t~~klWgldr~SFrrIi~~s~~kkrkMy~~~l~s~ 245 (368)
T KOG1113|consen 194 ELALMYNPPRAATVVAKSLKKLWGLDRTSFRRIIMKSCIKKRKMYEPFLESV 245 (368)
T ss_pred hhHhhhCCCcccceeeccccceEEEeeceeEEEeeccchhhhhhhhhhhhcc
Confidence 9999999999999999999999999999999999888888888888777754
No 94
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=99.44 E-value=5.6e-13 Score=128.70 Aligned_cols=112 Identities=18% Similarity=0.225 Sum_probs=104.4
Q ss_pred HHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEEcc
Q 006072 243 FINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCE 322 (662)
Q Consensus 243 ~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a~~ 322 (662)
|..++....+.+.|++|++|+.+||..+++|||.+|.|+++..+.+|++..+..+.+|++||+.+++.+.+++++++|.+
T Consensus 23 ~~~~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~~G~e~~~~~~~~g~~~G~~~~~~~~~~~~~~~A~~ 102 (226)
T PRK10402 23 FSFDVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLANGKVSLIDFFAAPCFIGEIELIDKDHETKAVQAIE 102 (226)
T ss_pred CCHHHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEeeeeecCCCCeEEeehhhcCCCCCccEEEec
Confidence 33568888999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred ceeEEEecHHHHHHHHHHhhhcHHHHHHHHhc
Q 006072 323 LCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQ 354 (662)
Q Consensus 323 ~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~ 354 (662)
+|+++.+++++|.+++..+|.....++..+.+
T Consensus 103 ~~~i~~i~~~~~~~ll~~~p~~~~~~~~~l~~ 134 (226)
T PRK10402 103 ECWCLALPMKDCRPLLLNDALFLRKLCKFLSH 134 (226)
T ss_pred cEEEEEEEHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999999988888777764
No 95
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.43 E-value=2.8e-13 Score=97.84 Aligned_cols=54 Identities=43% Similarity=0.564 Sum_probs=43.8
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHH
Q 006072 510 LRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLE 563 (662)
Q Consensus 510 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll 563 (662)
|.||||+||..|+.+++++|+++|+|+|.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 689999999999999999999999999999999999999999999999999886
No 96
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.42 E-value=9.8e-13 Score=121.34 Aligned_cols=60 Identities=25% Similarity=0.386 Sum_probs=40.3
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccc
Q 006072 508 YDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKS 567 (662)
Q Consensus 508 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga 567 (662)
..+.||||.|+.+|+.++.++|++.||.+...|.-|+|+-..|+.-|+.++|..+-++-.
T Consensus 77 g~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~~t 136 (396)
T KOG1710|consen 77 GTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNHIT 136 (396)
T ss_pred cccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcccc
Confidence 345677777777777777777777777777777777777777777777776666655433
No 97
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.41 E-value=1.6e-12 Score=144.31 Aligned_cols=100 Identities=34% Similarity=0.494 Sum_probs=89.0
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHH
Q 006072 479 SFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNL 558 (662)
Q Consensus 479 ~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~i 558 (662)
..|+.|+..|+.+.++.|+++|+++|.+|..|.||||+||..|+.+++++|+++|+|++.+|..|.||||+|+..|+.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 35888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhc-------cccccccCCCCCc
Q 006072 559 IKLLEDA-------KSTQLLEFPHGFQ 578 (662)
Q Consensus 559 v~~Ll~~-------ga~~~~~~~~~~~ 578 (662)
+++|+++ |++.......|..
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~ 190 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKPDSFTGKP 190 (664)
T ss_pred HHHHHhCCCcccccCCCCCccccCCCC
Confidence 9999998 6666665555543
No 98
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.40 E-value=1.1e-12 Score=145.65 Aligned_cols=100 Identities=22% Similarity=0.251 Sum_probs=55.2
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHH
Q 006072 416 PLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLL 493 (662)
Q Consensus 416 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v 493 (662)
.|+.|+..|+.++++.|+++|+++|..|..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv 164 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVV 164 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence 3566666666666666666666666666666666666666666666666665555444322 33444444444444444
Q ss_pred HHHHHc-------CCCCCCCCCCCCcHHH
Q 006072 494 KRVLSN-------GIDPNTRDYDLRTPLH 515 (662)
Q Consensus 494 ~~Ll~~-------g~~~~~~~~~g~t~L~ 515 (662)
++|+++ |++++..+..|.+|+.
T Consensus 165 ~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~ 193 (664)
T PTZ00322 165 QLLSRHSQCHFELGANAKPDSFTGKPPSL 193 (664)
T ss_pred HHHHhCCCcccccCCCCCccccCCCCccc
Confidence 444443 4444444444444443
No 99
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.38 E-value=3.9e-13 Score=97.49 Aligned_cols=55 Identities=47% Similarity=0.662 Sum_probs=33.3
Q ss_pred HHHcC-CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHH
Q 006072 399 LIRAG-ADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEA 453 (662)
Q Consensus 399 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 453 (662)
|++.| .+++..|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56777 88999999999999999999999999999999999999999999999987
No 100
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=99.38 E-value=4.8e-12 Score=121.64 Aligned_cols=125 Identities=22% Similarity=0.360 Sum_probs=113.1
Q ss_pred cccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhc
Q 006072 231 EKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILC 310 (662)
Q Consensus 231 ~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~ 310 (662)
...+.|...+.+....+......+.+++|++|+++||..+.+|+|.+|.++++....+|++..+..+++|++||+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~fg~~~l~~ 82 (214)
T COG0664 3 KENPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTEDGREIILGFLGPGDFFGELALLG 82 (214)
T ss_pred ccccccccCCHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECCCCcEEEEEEecCCchhhhHHHhc
Confidence 44567776788888888889999999999999999999999999999999999999899999999999999999999999
Q ss_pred cCCccceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHHHHhcC
Q 006072 311 NIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQG 355 (662)
Q Consensus 311 ~~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~~ 355 (662)
+.|++++++|.++|+++.++++.|.+++..+|.....++..+.++
T Consensus 83 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~ 127 (214)
T COG0664 83 GDPRSASAVALTDVEVLEIPRKDFLELLAESPKLALALLRLLARR 127 (214)
T ss_pred CCCccceEEEcceEEEEEecHHHHHHHHhhCcHHHHHHHHHHHHH
Confidence 889999999999999999999999998888777777777766554
No 101
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=1.4e-12 Score=129.79 Aligned_cols=92 Identities=33% Similarity=0.416 Sum_probs=81.1
Q ss_pred hhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHH
Q 006072 382 LKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGA 461 (662)
Q Consensus 382 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 461 (662)
.-|..|+..|.+|+|+..+..-.|+...+..|-|+||-|+..||.+||++|++.|+|+|..|.+|+||||+|+..++..+
T Consensus 552 aLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 552 ALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence 34667888999999999998888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCc
Q 006072 462 ASLLVKEGASLN 473 (662)
Q Consensus 462 v~~Ll~~g~~~~ 473 (662)
++.|++.|+-+-
T Consensus 632 ckqLVe~Gaavf 643 (752)
T KOG0515|consen 632 CKQLVESGAAVF 643 (752)
T ss_pred HHHHHhccceEE
Confidence 999999887653
No 102
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.38 E-value=3.5e-12 Score=117.76 Aligned_cols=119 Identities=23% Similarity=0.226 Sum_probs=105.7
Q ss_pred hhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcc-cCCCCCcHHHHHHHhCC
Q 006072 380 LALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINL-KDNFGNTPLLEAIKYGN 458 (662)
Q Consensus 380 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~ 458 (662)
...||..++..|+.+....|++.-.++|..|.+|+|+|..|+..|+.++++.|++.|+|+|. ++..+.||||+|+..|+
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn 91 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN 91 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence 45789999999999999999988667999999999999999999999999999999999985 45678999999999999
Q ss_pred HHHHHHHHHcCCCCcccc--cchHHHHHHHcCCHHHHHHHHH
Q 006072 459 DGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLS 498 (662)
Q Consensus 459 ~~~v~~Ll~~g~~~~~~~--~~~~l~~A~~~~~~~~v~~Ll~ 498 (662)
.++.++|++.|+.+...+ |+|+-..|+--|+.++|..+-+
T Consensus 92 ~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 92 QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence 999999999999887765 7899999999998888876643
No 103
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.38 E-value=3.8e-13 Score=132.63 Aligned_cols=159 Identities=27% Similarity=0.345 Sum_probs=127.8
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHH
Q 006072 480 FLCTAVARGDSDLLKRVLSNGIDPNTRD-YDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNL 558 (662)
Q Consensus 480 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~i 558 (662)
.||..++.|+.+..-.|+..|+++|..+ ..|.||||+|++.|+..-+++|+-+|||++..|.+|+||+.+|...||.++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l 215 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL 215 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence 4999999999999999999999999887 679999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccccccCCC---CCccccccCCCCCcccccCCCCCCcccccccceEEEcCC-----cHHHHHHHHHhHcCCC
Q 006072 559 IKLLEDAKSTQLLEFPH---GFQDTADKRNPTRKCTVFPFHPWDAKESRRHGIVLWIPQ-----NIKDLIKTAAEQLDFR 630 (662)
Q Consensus 559 v~~Ll~~ga~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~el~~~~~~~~~~~ 630 (662)
.+-|++..-+..-+... |..+. ...+.-..+|+ -+.|+.+.+.+++...
T Consensus 216 aeRl~e~~y~vtDR~~f~lcgrKpD-----------------------HkngqhfiIP~~~~sld~se~~k~ar~klq~l 272 (669)
T KOG0818|consen 216 AERLVEIQYELTDRLAFYLCGRKPD-----------------------HKNGQHFIIPQMADSLDLSELAKAAKKKLQSL 272 (669)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc-----------------------ccCCcceeccccccchhHHHHHHHHHHHHhhc
Confidence 99999876554333211 11100 01111122332 2677888888887764
Q ss_pred CCcccccCCCceeeeeeeeecCCeEEEeecCC
Q 006072 631 GGDCILSSEGGKILDVDMINDDQKLYLIQETH 662 (662)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 662 (662)
+ .+.+-+-+..+.|..++|+.|.+|++|++|
T Consensus 273 ~-n~~FeeL~mD~yDEvdRRE~eavW~~tqnh 303 (669)
T KOG0818|consen 273 S-NHLFEELAMDVYDEVDRRETDAVWLATQNH 303 (669)
T ss_pred c-hhhHHHHHHHHHHHHhhhhhhhHHhhhccc
Confidence 4 677777788888899999999999999987
No 104
>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria []. ; PDB: 1KKD_A 2A0L_A 1ORQ_C 3UKM_C 1LNQ_E 3OUS_A 3LDC_A 3LDD_A 3RBZ_A 3LDE_A ....
Probab=99.38 E-value=3.6e-12 Score=100.17 Aligned_cols=55 Identities=33% Similarity=0.617 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 106 SYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIV 160 (662)
Q Consensus 106 ~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~ 160 (662)
.|.+|+||+++|+||+||||+.|.++.+|+++++.+++|+.++++.++.+++.+.
T Consensus 24 ~~~da~yfs~~t~tTvGyGDi~p~t~~gr~~~~~~~~~G~~~~~~~~~~~~~~l~ 78 (79)
T PF07885_consen 24 SFIDALYFSFVTITTVGYGDIVPQTPAGRIFTIIYMLIGIFLFALFLSVLASVLT 78 (79)
T ss_dssp SHHHHHHHHHHHHTT---SSSSTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcccCCCccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4888999999999999999999999999999999999999999999999998875
No 105
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.37 E-value=1.3e-12 Score=94.27 Aligned_cols=54 Identities=46% Similarity=0.687 Sum_probs=37.8
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHH
Q 006072 413 GRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLV 466 (662)
Q Consensus 413 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 466 (662)
|+||||+||..|+.+++++|+++|+++|.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 567888888888888888888778888877777888888888888888777775
No 106
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=1.1e-12 Score=131.02 Aligned_cols=118 Identities=22% Similarity=0.278 Sum_probs=109.4
Q ss_pred HHHHHHHHHHhcccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCC
Q 006072 220 KISQTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHP 299 (662)
Q Consensus 220 ~i~~~~~~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~ 299 (662)
.=..++..+.+.+..|+++++.+.+.+++..|.+..|.+|++|+++||.++++|.+.+|++++.+ ..+.+..+++
T Consensus 146 ~~~k~lI~dAi~~NdFLknLd~~Qi~e~v~~Myp~~~~~gs~IIrege~Gs~~yV~aeG~~~V~~-----~g~ll~~m~~ 220 (732)
T KOG0614|consen 146 VGAKQLIRDAIQKNDFLKNLDASQIKELVDCMYPVEYRAGSWIIREGEPGSHLYVSAEGELQVSR-----EGKLLGKMGA 220 (732)
T ss_pred ccHHHHHHHHHHhhHHHHhhhHHHHHHHHHhhCcccccCCcEEEecCCCCceEEEeecceEEEee-----CCeeeeccCC
Confidence 34457778889999999999999999999999999999999999999999999999999999886 3456889999
Q ss_pred CccccchhhhccCCccceEEEccceeEEEecHHHHHHHHHHhh
Q 006072 300 NSSFGEVSILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYF 342 (662)
Q Consensus 300 G~~fGe~~~l~~~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~ 342 (662)
|..|||.+++++.+|+++++|+++|.++.|+|+.|..++....
T Consensus 221 gtvFGELAILynctRtAsV~alt~~~lWaidR~vFq~IM~~tg 263 (732)
T KOG0614|consen 221 GTVFGELAILYNCTRTASVRALTDVRLWAIDREVFQAIMMRTG 263 (732)
T ss_pred chhhhHHHHHhCCcchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998665
No 107
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=99.35 E-value=1.1e-11 Score=120.93 Aligned_cols=124 Identities=13% Similarity=0.151 Sum_probs=109.0
Q ss_pred cccccccCCCHHHHHHHHHhccc-eeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhh
Q 006072 231 EKVPLFKGCSSEFINQIVIRLHE-EFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSIL 309 (662)
Q Consensus 231 ~~~~~f~~~~~~~~~~l~~~~~~-~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l 309 (662)
++.+.|..++++.+..|....+. ..|++|+.|+++||..+++|+|.+|.|+++..+.+|++.++..+.+|++||+..++
T Consensus 16 ~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~~G~e~i~~~~~~gd~~g~~~~~ 95 (235)
T PRK11161 16 SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG 95 (235)
T ss_pred cccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECCCCCEEEEEeccCCceecccccc
Confidence 34444556999999999988864 68999999999999999999999999999998889999999999999999987664
Q ss_pred ccCCccceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHHHHhcC
Q 006072 310 CNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQG 355 (662)
Q Consensus 310 ~~~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~~ 355 (662)
. .+.+.+++|.++|.++.++++.|.+++..+|.....++..+...
T Consensus 96 ~-~~~~~~~~a~~~~~i~~ip~~~f~~l~~~~p~~~~~~~~~~~~~ 140 (235)
T PRK11161 96 S-GQHPSFAQALETSMVCEIPFETLDDLSGKMPKLRQQIMRLMSGE 140 (235)
T ss_pred C-CCCcceEEEeccEEEEEEEHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 4 45567899999999999999999999999999999888877654
No 108
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=2.5e-12 Score=127.96 Aligned_cols=95 Identities=31% Similarity=0.405 Sum_probs=88.5
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHH
Q 006072 481 LCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIK 560 (662)
Q Consensus 481 l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~ 560 (662)
|.-|+..|..++|+..+..--|+...+..|-||||-|+..||.+||++|++.|+|+|..|.+||||||+|+..++..+++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence 55688999999999999988899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccccccCCC
Q 006072 561 LLEDAKSTQLLEFPH 575 (662)
Q Consensus 561 ~Ll~~ga~~~~~~~~ 575 (662)
.|++.||-.+...-.
T Consensus 634 qLVe~GaavfAsTlS 648 (752)
T KOG0515|consen 634 QLVESGAAVFASTLS 648 (752)
T ss_pred HHHhccceEEeeecc
Confidence 999999988765433
No 109
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=4.4e-12 Score=126.80 Aligned_cols=121 Identities=22% Similarity=0.395 Sum_probs=109.3
Q ss_pred HHHHHHHhcccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecC-CcccEEEEeCCCc
Q 006072 223 QTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEEN-GTEDYVSYLHPNS 301 (662)
Q Consensus 223 ~~~~~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~-~~~~~~~~l~~G~ 301 (662)
.+.+..+++++|+|++++++.+..++..++..+|..|++|+++|+.++.+|+|.+|.|.+.+..+. +.+..+.++..||
T Consensus 267 ~~~~~~fLrsv~~~q~l~Ee~L~KiaD~le~~~Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e~~~q~~~lr~l~kGd 346 (732)
T KOG0614|consen 267 HEQYMNFLRSVPLFQNLPEELLLKIADVLEEEYYDAGEYIIRQGEKGDTFFIISKGTVKVTQQDEGSTQPQELRTLNKGD 346 (732)
T ss_pred HHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHhhcCCceEEeecCCCCeEEEEecceEEEeecCCCCCchhHHhhccccc
Confidence 345678899999999999999999999999999999999999999999999999999999876665 5667889999999
Q ss_pred cccchhhhccCCccceEEEccc-eeEEEecHHHHHHHHHHhhh
Q 006072 302 SFGEVSILCNIPQPYTVQVCEL-CRLLRIDKQSFTNIIDIYFC 343 (662)
Q Consensus 302 ~fGe~~~l~~~~~~~~~~a~~~-~~l~~l~~~~~~~~l~~~~~ 343 (662)
+|||-+++....|++++.|... ++++.|+++.|..++-...+
T Consensus 347 ~FGE~al~~edvRtAniia~~~gv~cl~lDresF~~liG~l~~ 389 (732)
T KOG0614|consen 347 YFGERALLGEDVRTANIIAQAPGVECLTLDRESFKKLIGDLEE 389 (732)
T ss_pred hhhHHHhhccCccchhhhccCCCceEEEecHHHHHHhcccHHH
Confidence 9999999999999999999988 89999999999888754433
No 110
>PLN02868 acyl-CoA thioesterase family protein
Probab=99.28 E-value=2.1e-11 Score=128.27 Aligned_cols=113 Identities=19% Similarity=0.232 Sum_probs=104.0
Q ss_pred HHHhcccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccch
Q 006072 227 LPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV 306 (662)
Q Consensus 227 ~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~ 306 (662)
.++++++++|++++++.+.+++..++.+.|++||+|+++||..+.+|+|.+|.|+++....+| +..+..+++|++||+.
T Consensus 7 ~~~L~~~~~F~~L~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~~g-e~~l~~l~~Gd~fG~~ 85 (413)
T PLN02868 7 VEFLGSVPLLQRLPSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEE-SRPEFLLKRYDYFGYG 85 (413)
T ss_pred HHHHhcCcccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECCCC-cEEEEEeCCCCEeehh
Confidence 456789999999999999999999999999999999999999999999999999999877776 6778889999999975
Q ss_pred hhhccCCccceEEEccceeEEEecHHHHHHHHHHhh
Q 006072 307 SILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYF 342 (662)
Q Consensus 307 ~~l~~~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~ 342 (662)
+.+.++..+++|.++|+++.|+++.|..+...++
T Consensus 86 --l~~~~~~~~~~A~~d~~v~~ip~~~~~~~~~~~~ 119 (413)
T PLN02868 86 --LSGSVHSADVVAVSELTCLVLPHEHCHLLSPKSI 119 (413)
T ss_pred --hCCCCcccEEEECCCEEEEEEcHHHHhhhccccc
Confidence 6788999999999999999999999988877665
No 111
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=99.21 E-value=7.3e-11 Score=111.34 Aligned_cols=96 Identities=23% Similarity=0.294 Sum_probs=89.2
Q ss_pred CCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCc--cceEEEccceeEEEecHHHHHH
Q 006072 259 GEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQ--PYTVQVCELCRLLRIDKQSFTN 336 (662)
Q Consensus 259 ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~--~~~~~a~~~~~l~~l~~~~~~~ 336 (662)
|+.|+++||..+++|+|.+|.|+++...++|++..+..+.+|++||+.+++.+.+. .++++|.++|.++.+++++|.+
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~~G~e~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~ 80 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYESGEEITVALLRENSVFGVLSLITGHRSDRFYHAVAFTRVELLAVPIEQVEK 80 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCCCCcEeeeEEccCCCEeeeeeeccCCCCccceEEEEecceEEEEeeHHHHHH
Confidence 78999999999999999999999999889999999999999999999999987754 5789999999999999999999
Q ss_pred HHHHhhhcHHHHHHHHhc
Q 006072 337 IIDIYFCDGRKVLTNLLQ 354 (662)
Q Consensus 337 ~l~~~~~~~~~il~~l~~ 354 (662)
++..+|.....++..+.+
T Consensus 81 l~~~~p~l~~~~~~~l~~ 98 (193)
T TIGR03697 81 AIEEDPDLSMLLLQGLSS 98 (193)
T ss_pred HHHHChHHHHHHHHHHHH
Confidence 999999999999887765
No 112
>PRK09391 fixK transcriptional regulator FixK; Provisional
Probab=99.19 E-value=1.3e-10 Score=112.46 Aligned_cols=108 Identities=18% Similarity=0.207 Sum_probs=97.9
Q ss_pred HHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEEccce
Q 006072 245 NQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELC 324 (662)
Q Consensus 245 ~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a~~~~ 324 (662)
..+....+.+.|++|++|+.+||..+++|||.+|.|+++....+|++.++..+.+|++||+. .+.++.++++|.++|
T Consensus 32 ~~~~~~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~~G~e~i~~~~~~Gd~fG~~---~~~~~~~~~~A~~ds 108 (230)
T PRK09391 32 GHAGLVASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLSDGRRQIGAFHLPGDVFGLE---SGSTHRFTAEAIVDT 108 (230)
T ss_pred ccccceeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCceeccc---CCCcCCeEEEEcCce
Confidence 45566778899999999999999999999999999999998889999899999999999964 467788999999999
Q ss_pred eEEEecHHHHHHHHHHhhhcHHHHHHHHhcC
Q 006072 325 RLLRIDKQSFTNIIDIYFCDGRKVLTNLLQG 355 (662)
Q Consensus 325 ~l~~l~~~~~~~~l~~~~~~~~~il~~l~~~ 355 (662)
.++.++.+.|.+++..+|.....++..+.+.
T Consensus 109 ~v~~i~~~~f~~l~~~~p~l~~~l~~~l~~~ 139 (230)
T PRK09391 109 TVRLIKRRSLEQAAATDVDVARALLSLTAGG 139 (230)
T ss_pred EEEEEEHHHHHHHHhhChHHHHHHHHHHHHH
Confidence 9999999999999999999999988877653
No 113
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
Probab=99.17 E-value=5.7e-10 Score=113.71 Aligned_cols=125 Identities=19% Similarity=0.277 Sum_probs=114.1
Q ss_pred HHHhcccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccch
Q 006072 227 LPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV 306 (662)
Q Consensus 227 ~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~ 306 (662)
.+++.++|.|+.++++.+.+|...+...+|.+||.|+..|.+..++|+|.+|.|+++. ++|. ++..+..|+.||..
T Consensus 6 ~~Fl~~~pPF~~L~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~--~~g~--v~~~~~~gdlFg~~ 81 (610)
T COG2905 6 DQFLQQHPPFSQLPAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRS--DGGE--VLDRLAAGDLFGFS 81 (610)
T ss_pred HHHHhcCCCcccCCHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceeeEEc--CCCe--eeeeeccCccccch
Confidence 4677899999999999999999999999999999999999999999999999999875 2333 78899999999999
Q ss_pred hhhccCCccceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHHHHhcC
Q 006072 307 SILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQG 355 (662)
Q Consensus 307 ~~l~~~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~~ 355 (662)
++++..+....+.+.+++.+|.|+++.|.+++..+|.+...+...+.++
T Consensus 82 ~l~~~~~~~~~~~aeedsl~y~lp~s~F~ql~~~n~~f~~ff~~~~akR 130 (610)
T COG2905 82 SLFTELNKQRYMAAEEDSLCYLLPKSVFMQLMEENPEFADFFLRSLAKR 130 (610)
T ss_pred hhcccCCCcceeEeeccceEEecCHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999988888899999999999999999999999999988888776654
No 114
>PRK13918 CRP/FNR family transcriptional regulator; Provisional
Probab=99.11 E-value=4.2e-10 Score=106.98 Aligned_cols=98 Identities=20% Similarity=0.324 Sum_probs=85.0
Q ss_pred hccceeccCCCeEEecCC--ccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEEccceeEE
Q 006072 250 RLHEEFFLPGEVIMEKGN--VVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLL 327 (662)
Q Consensus 250 ~~~~~~~~~ge~I~~~g~--~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a~~~~~l~ 327 (662)
.++...|++|++|+++|| ..+.+|+|++|.|+++....+|++.++..+.+|++||+..+ .+.+++++++|.++|.++
T Consensus 5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~G~e~~l~~~~~Gd~~G~~~~-~~~~~~~~~~A~~~~~v~ 83 (202)
T PRK13918 5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDDEGNALTLRYVRPGEYFGEEAL-AGAERAYFAEAVTDSRID 83 (202)
T ss_pred ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCeechHHh-cCCCCCceEEEcCceEEE
Confidence 467789999999999999 77999999999999999899999999999999999999655 467889999999999999
Q ss_pred EecHHHHHHHHHHhhhcHHHHHHHHhc
Q 006072 328 RIDKQSFTNIIDIYFCDGRKVLTNLLQ 354 (662)
Q Consensus 328 ~l~~~~~~~~l~~~~~~~~~il~~l~~ 354 (662)
.++++.| +|.....++..+..
T Consensus 84 ~i~~~~~------~~~~~~~l~~~l~~ 104 (202)
T PRK13918 84 VLNPALM------SAEDNLVLTQHLVR 104 (202)
T ss_pred EEEHHHc------ChhhHHHHHHHHHH
Confidence 9999887 45555666655543
No 115
>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism]
Probab=99.03 E-value=4.2e-12 Score=121.75 Aligned_cols=137 Identities=18% Similarity=0.237 Sum_probs=86.1
Q ss_pred chhHHHHhhCcchhhH---HHHHHHHHHHHhHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 006072 2 PWDLIYKASGRKEAVR---YLLWIRLYRVRKVSQFFHKMEKD-IRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPP 77 (662)
Q Consensus 2 P~~~i~~~~~~~~~~~---~lrl~rllRl~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~~ 77 (662)
||.+-....+..++.. -+|.+|++|++|+.|--+.+.-. +.+..-...+--+++.+.+.+-++|.++||-....+
T Consensus 272 PYYigLv~t~N~DVSGaFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLlFSLtMAIIIFATvMfYAEKg~~- 350 (632)
T KOG4390|consen 272 PYYIGLVMTDNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSS- 350 (632)
T ss_pred hhheEEEecCCccccceeEEEEeeeeeeeeeecccccccchhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhcccc-
Confidence 5554444444433332 24555555666665544444322 111111223444566666666777888776653211
Q ss_pred CCCCceEEeeccCCCCCcchhhccchHHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHH----
Q 006072 78 EQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIG---- 153 (662)
Q Consensus 78 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~---- 153 (662)
.+-|+....+||++++||||.||||++|.|..+++|..++.+.|+++.|..+-
T Consensus 351 -----------------------at~FTsIPaaFWYTIVTmTTLGYGDMVp~TIaGKIfGsiCSLSGVLVIALPVPvIVS 407 (632)
T KOG4390|consen 351 -----------------------ATKFTSIPAAFWYTIVTMTTLGYGDMVPSTIAGKIFGSICSLSGVLVIALPVPVIVS 407 (632)
T ss_pred -----------------------ccccccCcHhHhhheeeeeeccccccchHHHHHHHhhhhhcccceEEEeccccEEEe
Confidence 12234556799999999999999999999999999999999999999988554
Q ss_pred HHHHHHHcC
Q 006072 154 NMTALIVKG 162 (662)
Q Consensus 154 ~i~~~~~~~ 162 (662)
++..|.-++
T Consensus 408 NFSRIYHQN 416 (632)
T KOG4390|consen 408 NFSRIYHQN 416 (632)
T ss_pred chhHHHhhh
Confidence 455555443
No 116
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=99.03 E-value=2.4e-09 Score=101.44 Aligned_cols=133 Identities=23% Similarity=0.271 Sum_probs=88.7
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceEEeeccCCCC
Q 006072 15 AVRYLLWIRLYRVRKVSQFFHKMEKDI-RINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDY 93 (662)
Q Consensus 15 ~~~~lrl~rllRl~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~~~~~w~~~~~~~~~ 93 (662)
.++++|++|++|++|+.+.++.+.... .......++.++++.++++.|++||+++.+............ ..
T Consensus 61 ~~~~~~~l~~~R~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~lf~~~~~~~~~~~--------~~ 132 (200)
T PF00520_consen 61 LLRIFRLLRLLRLLRLLRRFRSLRRLLRALIRSFPDLFKFILLLFIVLLFFACIGYQLFGGSDNSCCDPT--------WD 132 (200)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS---------------SS
T ss_pred eEEEEEeeccccccccccccccccccccccccccccccccccccccccccccchhheecccccccccccc--------cc
Confidence 345555555555555555544444332 223455678999999999999999999988765332211100 01
Q ss_pred CcchhhccchHHHHHHHHHHHHHHhhcccCCCcccC-----ChhhHHHH-HHHHHHHHHHHHHHHHHH
Q 006072 94 SYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAV-----NLREMVFI-MIYVSFDMILGAYLIGNM 155 (662)
Q Consensus 94 ~~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~-----~~~e~~~~-i~~~~~g~~~~~~~i~~i 155 (662)
........+.++.|..|+||++.++||.||||+.|. +..+.++. ++..+.+.+++++++|.|
T Consensus 133 ~~~~~~~~~~f~~~~~s~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~nlliavi 200 (200)
T PF00520_consen 133 SENDIYGYENFDSFGESLYWLFQTMTGEGWGDVMPSCMSARSWLAVIFFISFIIIVSILLLNLLIAVI 200 (200)
T ss_dssp ----SSTHHHHSSHHHHHHHHHHHHTTTTCCCCHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCccccccccccccchhHhHHhhhhhhhHHHHHHHHHHhcC
Confidence 112233445567899999999999999999999997 88899998 666666668889888865
No 117
>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.00 E-value=1e-10 Score=117.70 Aligned_cols=125 Identities=19% Similarity=0.307 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cccHHHHHHHHHHHHHHhhc-
Q 006072 105 KSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVKG-SKTEKFRDKMTDLMKYINRN- 182 (662)
Q Consensus 105 ~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~~-~~~~~~~~~~~~~~~~m~~~- 182 (662)
-.|..|.|+.++||+||||||+...|..++.|.+|+++.|..+||-.+..|..++.+. ....+|...-- +++
T Consensus 287 ltyw~cvyfl~vtmstvgygdvyc~t~lgrlfmvffil~glamfasyvpeiielignr~kyggeyk~ehg------kkhi 360 (1103)
T KOG1420|consen 287 LTYWECVYFLMVTMSTVGYGDVYCKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGEYKAEHG------KKHI 360 (1103)
T ss_pred chhhheeeeeEEEeeeccccceeehhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHccccccCceeehhcC------CeeE
Confidence 4699999999999999999999999999999999999999999999999999999772 22223322100 000
Q ss_pred CCC-HHHHHHHHHHHHHHHhhhcc----HhHHHhhchHHHHHHHHHHHHHHHhcccccccC
Q 006072 183 RLG-RDIRDQIIGHLRLQYESSYT----EASVLQDIPISIRAKISQTLYLPYIEKVPLFKG 238 (662)
Q Consensus 183 ~l~-~~l~~~i~~~~~~~~~~~~~----~~~~l~~Lp~~L~~~i~~~~~~~~l~~~~~f~~ 238 (662)
-+- .-.-+.|..|++-..++..+ |--++...||.|.-| .+++.-+.++.||++
T Consensus 361 vvcghityesvshflkdflhedrddvdvevvflhr~~pdlele---glfkrhft~veffqg 418 (1103)
T KOG1420|consen 361 VVCGHITYESVSHFLKDFLHEDRDDVDVEVVFLHRISPDLELE---GLFKRHFTQVEFFQG 418 (1103)
T ss_pred EEecceeHHHHHHHHHHHhhccccccceEEEEEecCCCCcchH---HHHhhheeeEEEecc
Confidence 000 11123455555544444432 334678888888765 456666778888875
No 118
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=98.97 E-value=9.6e-10 Score=105.62 Aligned_cols=117 Identities=21% Similarity=0.403 Sum_probs=106.4
Q ss_pred HHHHHHHHHhcccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCC
Q 006072 221 ISQTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPN 300 (662)
Q Consensus 221 i~~~~~~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G 300 (662)
...-++...|+++|++..+.......++..+.+..|.+|+.|+.+|++++.+|+|.+|.|.+.... +| ..+ .++.|
T Consensus 233 kkrkMy~~~l~s~pil~~l~k~er~kv~dal~~k~y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~-~~--v~v-kl~~~ 308 (368)
T KOG1113|consen 233 KKRKMYEPFLESVPILESLEKLERAKVADALGTKSYKDGERVIVQGDQGEHFYIIEEGEVDVLKKR-DG--VEV-KLKKG 308 (368)
T ss_pred hhhhhhhhhhhcchhhHHHHHHHHHhhhcccceeeccCCceEEeccCCcceEEEecccccchhhcc-CC--eEE-Eechh
Confidence 345678899999999999999999999999999999999999999999999999999999987644 23 445 79999
Q ss_pred ccccchhhhccCCccceEEEccceeEEEecHHHHHHHHHHh
Q 006072 301 SSFGEVSILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIY 341 (662)
Q Consensus 301 ~~fGe~~~l~~~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~ 341 (662)
++|||.+++.+.||.+++.|.+...+..++++.|+.++...
T Consensus 309 dyfge~al~~~~pr~Atv~a~~~~kc~~~dk~~ferllgpc 349 (368)
T KOG1113|consen 309 DYFGELALLKNLPRAATVVAKGRLKCAKLDKPRFERLLGPC 349 (368)
T ss_pred hhcchHHHHhhchhhceeeccCCceeeeeChHHHHHHhhHH
Confidence 99999999999999999999999999999999999988643
No 119
>PRK10537 voltage-gated potassium channel; Provisional
Probab=98.90 E-value=3.2e-08 Score=101.96 Aligned_cols=54 Identities=31% Similarity=0.461 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 106 SYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALI 159 (662)
Q Consensus 106 ~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~ 159 (662)
.+.+|+||+++|+|||||||+.|.|..+++++++++++|+.+|++.++.+...+
T Consensus 168 s~~dA~y~svvt~tTvGyGdi~p~t~~grl~~i~~ii~Gi~vf~~~is~i~~p~ 221 (393)
T PRK10537 168 SLSTAFYFSIVTMSTVGYGDIVPVSESARLFTISVIILGITVFATSISAIFGPV 221 (393)
T ss_pred CHHHHHHhhheeeecccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477899999999999999999999999999999999999999999999887644
No 120
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.87 E-value=2.2e-09 Score=106.09 Aligned_cols=90 Identities=43% Similarity=0.646 Sum_probs=85.3
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHC-CCCCCCCCCCCCChHHHHHHcCCH
Q 006072 478 GSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEA-GASVFPKDRWGNTPLDEGRMCGNK 556 (662)
Q Consensus 478 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~ 556 (662)
..++.+|+..|+...++.+.-.|.|++.+|.+.+|+||+|+..|+.+++++|++. +.|++.+|.+|+|||+-|...+|.
T Consensus 507 ~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~ 586 (622)
T KOG0506|consen 507 VINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHK 586 (622)
T ss_pred hhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcH
Confidence 3569999999999999999999999999999999999999999999999999986 799999999999999999999999
Q ss_pred HHHHHHHhccc
Q 006072 557 NLIKLLEDAKS 567 (662)
Q Consensus 557 ~iv~~Ll~~ga 567 (662)
+++++|.++..
T Consensus 587 ~v~k~L~~~~~ 597 (622)
T KOG0506|consen 587 EVVKLLEEAQY 597 (622)
T ss_pred HHHHHHHHHhc
Confidence 99999988754
No 121
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.82 E-value=4.4e-09 Score=103.97 Aligned_cols=97 Identities=34% Similarity=0.506 Sum_probs=90.2
Q ss_pred cchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhc-CCCCcccCCCCCcHHH
Q 006072 373 ISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQK-GVDINLKDNFGNTPLL 451 (662)
Q Consensus 373 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 451 (662)
....+.++..++.+|++.|++..++.+.-.|.|++.+|.+.+|+||+||..|+.+++++|++. +.+++.+|..|+|||.
T Consensus 499 ~~~~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlD 578 (622)
T KOG0506|consen 499 GGPRENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLD 578 (622)
T ss_pred cCcccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcch
Confidence 345566778899999999999999999999999999999999999999999999999999985 8999999999999999
Q ss_pred HHHHhCCHHHHHHHHHcC
Q 006072 452 EAIKYGNDGAASLLVKEG 469 (662)
Q Consensus 452 ~A~~~~~~~~v~~Ll~~g 469 (662)
-|...+|.+++++|-+.-
T Consensus 579 dA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 579 DAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred HhHhcCcHHHHHHHHHHh
Confidence 999999999999998753
No 122
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.80 E-value=2.5e-08 Score=101.02 Aligned_cols=92 Identities=30% Similarity=0.342 Sum_probs=81.6
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCC----CCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCC
Q 006072 480 FLCTAVARGDSDLLKRVLSNGIDP----NTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGN 555 (662)
Q Consensus 480 ~l~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 555 (662)
-|.-|+...+...+-+||.+|... ...+.+|+||||+||+.|++.+.++|+.+|+|+-.+|..|+|||.||...|.
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s 706 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS 706 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence 367788888899999999998543 2345678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccccc
Q 006072 556 KNLIKLLEDAKSTQLL 571 (662)
Q Consensus 556 ~~iv~~Ll~~ga~~~~ 571 (662)
.|++..|+++|..+.-
T Consensus 707 qec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 707 QECIDVLLQYGCPDEC 722 (749)
T ss_pred HHHHHHHHHcCCCccc
Confidence 9999999999976543
No 123
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.78 E-value=2.7e-08 Score=98.95 Aligned_cols=90 Identities=30% Similarity=0.346 Sum_probs=83.3
Q ss_pred hhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHh
Q 006072 378 AELALKVNSAAYHGDLYQLEGLIRAGADPNRTD-YDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKY 456 (662)
Q Consensus 378 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 456 (662)
.+....||.+++.|+++..-.|+..|+++|..+ ..|.||||+|++.|+..-+++|+-.|+|++.+|.+|+||+.+|-..
T Consensus 131 ~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~ 210 (669)
T KOG0818|consen 131 KDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQG 210 (669)
T ss_pred HHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhc
Confidence 345567999999999999999999999999876 6799999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHH
Q 006072 457 GNDGAASLLVK 467 (662)
Q Consensus 457 ~~~~~v~~Ll~ 467 (662)
||.++.+-|++
T Consensus 211 gH~~laeRl~e 221 (669)
T KOG0818|consen 211 GHHELAERLVE 221 (669)
T ss_pred CchHHHHHHHH
Confidence 99998887776
No 124
>PF13606 Ank_3: Ankyrin repeat
Probab=98.78 E-value=8.6e-09 Score=63.33 Aligned_cols=29 Identities=48% Similarity=0.600 Sum_probs=22.4
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHCCCCCC
Q 006072 509 DLRTPLHVAASEGLYLMAKLLVEAGASVF 537 (662)
Q Consensus 509 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 537 (662)
+|+||||+||..|+.+++++|+++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 47778888887788888888887777776
No 125
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.72 E-value=3.3e-08 Score=99.72 Aligned_cols=117 Identities=28% Similarity=0.368 Sum_probs=89.5
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCccc--ccchHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCcHHHHHHHhCcHHH
Q 006072 450 LLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARGDSDLLKRVLSNGID--PNTRDYDLRTPLHVAASEGLYLM 525 (662)
Q Consensus 450 L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~ 525 (662)
+.-|+..+..--++-....|.++-.+ +..+.||+|+..|+-++|++++++|.. ++..|..|.|+||.|+..++..+
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v 949 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV 949 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence 33444444433333344444444332 355677777777777777777777654 46677889999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhcc
Q 006072 526 AKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAK 566 (662)
Q Consensus 526 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g 566 (662)
.++|++.||.+-..|..|.||-..|-..|+.+++.+|.+..
T Consensus 950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 99999999999999999999999999999999999998664
No 126
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.71 E-value=1.9e-08 Score=63.93 Aligned_cols=33 Identities=42% Similarity=0.567 Sum_probs=27.1
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCC
Q 006072 509 DLRTPLHVAASEGLYLMAKLLVEAGASVFPKDR 541 (662)
Q Consensus 509 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 541 (662)
+|.||||+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 478888888888888888888888888887763
No 127
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.69 E-value=8.6e-09 Score=108.51 Aligned_cols=76 Identities=32% Similarity=0.303 Sum_probs=42.7
Q ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHH
Q 006072 477 AGSFLCTAVARGDSDLLKRVLSNGIDPNTRD-YDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRM 552 (662)
Q Consensus 477 ~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 552 (662)
|+++||+|+..+..+++++|+++|+|++.+| ..|+||||.|...|+.+++-+||++|+.+..+|++|.+||+.-++
T Consensus 52 GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 52 GRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred ccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHhh
Confidence 3344444444444444444455555555555 346666666666666666666666666666666666666665544
No 128
>PF13606 Ank_3: Ankyrin repeat
Probab=98.68 E-value=2.4e-08 Score=61.34 Aligned_cols=29 Identities=52% Similarity=0.962 Sum_probs=19.7
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhcCCCCc
Q 006072 412 DGRSPLHLAASRGYEEIMTFLIQKGVDIN 440 (662)
Q Consensus 412 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 440 (662)
+|+||||+||..|+.+++++|+++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 36667777777777777777777666665
No 129
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.63 E-value=8.1e-08 Score=96.98 Aligned_cols=114 Identities=17% Similarity=0.109 Sum_probs=70.4
Q ss_pred HHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCC----CCcccccchHHHHHHHcCCHHHHH
Q 006072 419 LAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGA----SLNVEEAGSFLCTAVARGDSDLLK 494 (662)
Q Consensus 419 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~~~l~~A~~~~~~~~v~ 494 (662)
.|+..++.--++-+-.+|.++-.++.+..|-||+|+..|+-++|++++++|. |....+|.|+||.|+..++..+++
T Consensus 872 ~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~ 951 (1004)
T KOG0782|consen 872 RAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQ 951 (1004)
T ss_pred HHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHH
Confidence 3444443333333334444555555555555555555555555555555553 222245666666666666667777
Q ss_pred HHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHC
Q 006072 495 RVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEA 532 (662)
Q Consensus 495 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 532 (662)
+|++.|+.+...|..|.||-..|-+.|..+++.+|-.+
T Consensus 952 ~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 952 LLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred HHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 77777777778888888888888888888888888654
No 130
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.58 E-value=7.8e-08 Score=61.02 Aligned_cols=32 Identities=50% Similarity=0.926 Sum_probs=23.6
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhcCCCCcccC
Q 006072 412 DGRSPLHLAASRGYEEIMTFLIQKGVDINLKD 443 (662)
Q Consensus 412 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 443 (662)
+|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 46777777777777777777777777777665
No 131
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.55 E-value=1.7e-07 Score=94.86 Aligned_cols=85 Identities=36% Similarity=0.406 Sum_probs=61.0
Q ss_pred HHHHHHcCCHHHHHHHH--HcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHH
Q 006072 481 LCTAVARGDSDLLKRVL--SNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNL 558 (662)
Q Consensus 481 l~~A~~~~~~~~v~~Ll--~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~i 558 (662)
+|.++...+.+-+..++ +.+..++..|..|.||||+|+..|+.+.++.|+.+|||+..+|..|++|||-|+..|+.++
T Consensus 24 lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~ 103 (560)
T KOG0522|consen 24 LHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQI 103 (560)
T ss_pred cchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHH
Confidence 55555544444333322 2345677788888888888888888888888888888888888888888888888888777
Q ss_pred HHHHHhc
Q 006072 559 IKLLEDA 565 (662)
Q Consensus 559 v~~Ll~~ 565 (662)
+..++.+
T Consensus 104 i~~vlr~ 110 (560)
T KOG0522|consen 104 ITEVLRH 110 (560)
T ss_pred HHHHHHH
Confidence 6655543
No 132
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.46 E-value=1.8e-07 Score=98.93 Aligned_cols=83 Identities=23% Similarity=0.231 Sum_probs=77.6
Q ss_pred cchhhhhhhhhHhHHhccCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHH
Q 006072 373 ISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTD-YDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLL 451 (662)
Q Consensus 373 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 451 (662)
.+-.|.-|.++||.|+..|..+++++|+++|++++.+| +.|+||||.|+..|+.|++-.|+.+|+.+...|.+|.+||.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence 55677888999999999999999999999999999988 57999999999999999999999999999999999999999
Q ss_pred HHHH
Q 006072 452 EAIK 455 (662)
Q Consensus 452 ~A~~ 455 (662)
.-++
T Consensus 125 ~~~r 128 (1267)
T KOG0783|consen 125 FLSR 128 (1267)
T ss_pred HHhh
Confidence 8876
No 133
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.46 E-value=5.1e-07 Score=91.85 Aligned_cols=92 Identities=30% Similarity=0.385 Sum_probs=80.8
Q ss_pred hhhHhHHhccCCHHHHHHHHHcCCC--CC--CCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHh
Q 006072 381 ALKVNSAAYHGDLYQLEGLIRAGAD--PN--RTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKY 456 (662)
Q Consensus 381 ~~~L~~A~~~g~~~~v~~Ll~~g~~--~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 456 (662)
-..|..|+...|+..+-.||.+|.. +| ..+.+|.|+||+||..|+..+.++|+-+|+|+-.+|.+|+|||.||-+.
T Consensus 625 gqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a 704 (749)
T KOG0705|consen 625 GQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQA 704 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhc
Confidence 3457789999999999999998854 33 3356789999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCC
Q 006072 457 GNDGAASLLVKEGASL 472 (662)
Q Consensus 457 ~~~~~v~~Ll~~g~~~ 472 (662)
|.-+|+..|+++|...
T Consensus 705 ~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 705 GSQECIDVLLQYGCPD 720 (749)
T ss_pred ccHHHHHHHHHcCCCc
Confidence 9999999999998754
No 134
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.44 E-value=1.3e-07 Score=104.54 Aligned_cols=91 Identities=37% Similarity=0.414 Sum_probs=84.8
Q ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcC
Q 006072 475 EEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCG 554 (662)
Q Consensus 475 ~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 554 (662)
..|.++||.|+..+..-+++.|+++|+++|..|..|+||||.+...|+...+..|+++||+++..|.+|.+|+++|....
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA 733 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CHHHHHHHHhc
Q 006072 555 NKNLIKLLEDA 565 (662)
Q Consensus 555 ~~~iv~~Ll~~ 565 (662)
+.+++-+|.-.
T Consensus 734 ~~d~~~l~~l~ 744 (785)
T KOG0521|consen 734 NADIVLLLRLA 744 (785)
T ss_pred cccHHHHHhhh
Confidence 88877766544
No 135
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=98.43 E-value=2.2e-07 Score=99.32 Aligned_cols=116 Identities=23% Similarity=0.299 Sum_probs=104.8
Q ss_pred HHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEE
Q 006072 241 SEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQV 320 (662)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a 320 (662)
..++..+=..+......||+.+++|||..|++|+|..|+++.......|+..++..++.||.+|+...+++.+|..|+.|
T Consensus 498 sp~lr~~D~AldWv~l~~g~alyrqgD~Sd~iyvVl~GRlRsv~~~~~~k~~i~~EygrGd~iG~~E~lt~~~R~tTv~A 577 (1158)
T KOG2968|consen 498 SPFLRKLDFALDWVRLEPGQALYRQGDSSDSIYVVLNGRLRSVIRQSGGKKEIVGEYGRGDLIGEVEMLTKQPRATTVMA 577 (1158)
T ss_pred CHHHhhhhhhcceEEeccccHHHhcCCccCcEEEEecCeehhhhhccCccchhhhhccCcceeehhHHhhcCCccceEEE
Confidence 35677777888999999999999999999999999999999887666677778889999999999999999999999999
Q ss_pred ccceeEEEecHHHHHHHHHHhhhcHHHHHHHHhcCC
Q 006072 321 CELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQGK 356 (662)
Q Consensus 321 ~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~~~ 356 (662)
..++++.+||..-|..+...||....++.+.+.+..
T Consensus 578 vRdSelariPe~l~~~ik~ryP~v~~rl~~ll~~~~ 613 (1158)
T KOG2968|consen 578 VRDSELARIPEGLLNFIKLRYPQVVTRLIKLLAEKI 613 (1158)
T ss_pred EeehhhhhccHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 999999999999999999999999888887776643
No 136
>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism]
Probab=98.42 E-value=9.4e-06 Score=81.21 Aligned_cols=89 Identities=12% Similarity=0.257 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhcCC
Q 006072 105 KSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYINRNRL 184 (662)
Q Consensus 105 ~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~m~~~~l 184 (662)
..|+.|+|....|..++||||++|.|..++.++++.-++|.++-|.+++.|+.=+. ..+--+.+++||-..++
T Consensus 286 ~~~~nsmWli~iTFlsiGYGDiVP~TycGr~v~l~tGivGa~~sallvAvisRKLe-------Lt~aEKhVhNFMmDtqL 358 (489)
T KOG3684|consen 286 INYLNSMWLIAITFLSIGYGDIVPNTYCGRGVALLTGIVGAGCSSLLVAVIARKLE-------LTKAEKHVHNFMMDTQL 358 (489)
T ss_pred HHHHhhHHHHHHHHhhcccCcccCCccccchHHHHhhhhhhhHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999988876442 22222345555555555
Q ss_pred CHHHHHHHHHHHHHHH
Q 006072 185 GRDIRDQIIGHLRLQY 200 (662)
Q Consensus 185 ~~~l~~~i~~~~~~~~ 200 (662)
.++.++-..+-++..|
T Consensus 359 Tk~~KnAAA~VLqeTW 374 (489)
T KOG3684|consen 359 TKEHKNAAANVLQETW 374 (489)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555444444444333
No 137
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.42 E-value=5.8e-07 Score=91.07 Aligned_cols=87 Identities=32% Similarity=0.432 Sum_probs=77.6
Q ss_pred hhHhHHhccCCHHHHHHHHHc--CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCH
Q 006072 382 LKVNSAAYHGDLYQLEGLIRA--GADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGND 459 (662)
Q Consensus 382 ~~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 459 (662)
.|+|.++...+.+-+...+.. +..++..|..|.||||.|+..|+.+.++.|+.+|+++..+|..|++|||.|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 569999999998888775543 456889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc
Q 006072 460 GAASLLVKE 468 (662)
Q Consensus 460 ~~v~~Ll~~ 468 (662)
.++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 888777764
No 138
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.42 E-value=1.5e-06 Score=93.51 Aligned_cols=133 Identities=22% Similarity=0.152 Sum_probs=92.0
Q ss_pred hhhhhhHhHHhccCCHHHHHHHHHcC----CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHH
Q 006072 378 AELALKVNSAAYHGDLYQLEGLIRAG----ADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEA 453 (662)
Q Consensus 378 ~~~~~~L~~A~~~g~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 453 (662)
..+.-....|+..|+.-.|+..++.. .++|..|.-|.++|+.|+.+.+.+++++|++++... ..+|.+|
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~a 95 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLA 95 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHH
Confidence 33445567799999999999888752 457888888999999999999999999999886554 3488888
Q ss_pred HHhCCHHHHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCC
Q 006072 454 IKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAG 533 (662)
Q Consensus 454 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 533 (662)
+..|..++|++++.+-........ .+......-..+.|||.+||..++.||+++||++|
T Consensus 96 I~~~~v~~VE~ll~~~~~~~~~~~---------------------~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg 154 (822)
T KOG3609|consen 96 IAVGSVPLVELLLVHFVDAPYLER---------------------SGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRG 154 (822)
T ss_pred HHHHHHHHHHHHHhcccccchhcc---------------------ccccCcccCCCCccHHHHHHHhcchHHHHHHHHcC
Confidence 988999999988887432211110 11111112234567777777777777777777777
Q ss_pred CCCCC
Q 006072 534 ASVFP 538 (662)
Q Consensus 534 a~~~~ 538 (662)
+++-.
T Consensus 155 ~~i~~ 159 (822)
T KOG3609|consen 155 HCIPI 159 (822)
T ss_pred CCCCC
Confidence 66543
No 139
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.33 E-value=1.6e-06 Score=76.13 Aligned_cols=69 Identities=23% Similarity=0.111 Sum_probs=64.5
Q ss_pred CCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCC-CCCCCCCCCCCChHHHHHHcCCHHHHHHHHhcccc
Q 006072 500 GIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAG-ASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKST 568 (662)
Q Consensus 500 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~ 568 (662)
+.++|.+|..|+|||++|+..|+.+.+.+|+.+| +++...|..|.+++.+|-+.|+.++++.|-+.-.+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 4689999999999999999999999999999999 99999999999999999999999999999887444
No 140
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.29 E-value=3.6e-06 Score=90.56 Aligned_cols=136 Identities=21% Similarity=0.207 Sum_probs=98.3
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhcC----CCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccccchHHHHHHHc
Q 006072 412 DGRSPLHLAASRGYEEIMTFLIQKG----VDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVAR 487 (662)
Q Consensus 412 ~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~ 487 (662)
.+.-....|+..|+.-.|+..++.. .++|..|.-|+++|+.|+.+.+.+++++|++++... +.+|-+|+..
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-----gdALL~aI~~ 98 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-----GDALLLAIAV 98 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-----chHHHHHHHH
Confidence 3445567889999998888877642 457788888999999999999999999988876544 5566777777
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccc
Q 006072 488 GDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKS 567 (662)
Q Consensus 488 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga 567 (662)
|..++|+.++.+....... +. .+......-.-+.||+.+||..+|.||+++|++.|+
T Consensus 99 ~~v~~VE~ll~~~~~~~~~--------~~---------------~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~ 155 (822)
T KOG3609|consen 99 GSVPLVELLLVHFVDAPYL--------ER---------------SGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH 155 (822)
T ss_pred HHHHHHHHHHhcccccchh--------cc---------------ccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence 7777777777653322111 11 222222334557899999999999999999999999
Q ss_pred cccccCCC
Q 006072 568 TQLLEFPH 575 (662)
Q Consensus 568 ~~~~~~~~ 575 (662)
....+...
T Consensus 156 ~i~~PH~~ 163 (822)
T KOG3609|consen 156 CIPIPHDI 163 (822)
T ss_pred CCCCCccc
Confidence 87655443
No 141
>PF01007 IRK: Inward rectifier potassium channel; InterPro: IPR013521 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. Inwardly-rectifying potassium channels (Kir) are the principal class of two-TM domain potassium channels. They are characterised by the property of inward-rectification, which is described as the ability to allow large inward currents and smaller outward currents. Inwardly rectifying potassium channels (Kir) are responsible for regulating diverse processes including: cellular excitability, vascular tone, heart rate, renal salt flow, and insulin release []. To date, around twenty members of this superfamily have been cloned, which can be grouped into six families by sequence similarity, and these are designated Kir1.x-6.x [, ]. Cloned Kir channel cDNAs encode proteins of between ~370-500 residues, both N- and C-termini are thought to be cytoplasmic, and the N terminus lacks a signal sequence. Kir channel alpha subunits possess only 2TM domains linked with a P-domain. Thus, Kir channels share similarity with the fifth and sixth domains, and P-domain of the other families. It is thought that four Kir subunits assemble to form a tetrameric channel complex, which may be hetero- or homomeric [].; PDB: 3AT9_A 3AUW_D 3SYA_A 3ATE_A 3SYQ_A 3SYO_A 3ATB_A 3SYC_A 3AT8_A 3ATA_A ....
Probab=98.24 E-value=7.3e-06 Score=82.33 Aligned_cols=99 Identities=19% Similarity=0.305 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCceEEeeccCCCCCcchhhccchHHHHHHHHHHHHHHhhcccCCC-
Q 006072 50 IVKLIAVELYCSHIAACIFYYLATTLPPEQ---EGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGD- 125 (662)
Q Consensus 50 ~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygd- 125 (662)
++-+++.+++..-+||++||.++....+-. ....|-+.. .-...+..+|++++.|+||+|||.
T Consensus 38 l~~f~~~y~~~~~~Fa~~y~~i~~~~gdl~~~~~~~~~~~Cv-------------~~~~~f~~aF~FSveT~tTIGYG~~ 104 (336)
T PF01007_consen 38 LLLFVLSYLLSWLFFALLYYLIAYSHGDLEPIHADSNWTPCV-------------SNVNSFTSAFLFSVETQTTIGYGSR 104 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCCTTTSBTTS-TSE-------------CT-TTHHHHHHHHHHHHTT---SSS
T ss_pred eehhHHHHHHHHHHHHHHHHHHhhhcccchhcccccCCCCce-------------ecccchhhheeEEEEEEEEeccCCc
Confidence 444556667777888999999886422111 111221110 011358899999999999999999
Q ss_pred -cccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 126 -VHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 126 -i~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
++|..+...++.++=+++|+++.|+++|.+-.=++.
T Consensus 105 ~~~~~c~~a~~l~~~q~~~g~l~~a~~~Glvfar~sr 141 (336)
T PF01007_consen 105 YPTPECPYAIFLVTIQSLVGLLLDAFMTGLVFARFSR 141 (336)
T ss_dssp EB-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 678888888999999999999999999988877755
No 142
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.13 E-value=5.7e-06 Score=80.15 Aligned_cols=75 Identities=23% Similarity=0.241 Sum_probs=64.3
Q ss_pred hhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHh
Q 006072 381 ALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKY 456 (662)
Q Consensus 381 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 456 (662)
.--|..||+.|+++.|++|++.|.++|..|.-..+||.+|+..||.++|++|+++|+-...-..+|..+ |+++.+
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLn 111 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALN 111 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhh
Confidence 446899999999999999999999999999999999999999999999999999998776555566554 344433
No 143
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.12 E-value=9.7e-06 Score=78.61 Aligned_cols=85 Identities=27% Similarity=0.302 Sum_probs=63.6
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHH
Q 006072 478 GSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKN 557 (662)
Q Consensus 478 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 557 (662)
..-|+.||+.|+.+.|++|++.|.++|..|.-..+||.+|+..||.++|++||++||--+.-..+|..++. ++. +..
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Y-gaL--nd~ 113 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHY-GAL--NDR 113 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhh-hhh--hHH
Confidence 34588888889999999999989999998888889999999999999999999998876655566666543 333 233
Q ss_pred HHHHHHhc
Q 006072 558 LIKLLEDA 565 (662)
Q Consensus 558 iv~~Ll~~ 565 (662)
|-++|++.
T Consensus 114 IR~mllsy 121 (516)
T KOG0511|consen 114 IRRMLLSY 121 (516)
T ss_pred HHHHHHHH
Confidence 44444443
No 144
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.08 E-value=5.3e-06 Score=91.29 Aligned_cols=68 Identities=32% Similarity=0.412 Sum_probs=58.2
Q ss_pred HcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCC------CCCCCCCChHHHHHHcCCHHHHHHHHhc
Q 006072 498 SNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVF------PKDRWGNTPLDEGRMCGNKNLIKLLEDA 565 (662)
Q Consensus 498 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~------~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ 565 (662)
-+|..++.+|..|+||||+|+..|+..++..|++.|++.. ..+..|.|+-..|..+|+..+..+|-+.
T Consensus 629 ~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 629 ADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred ecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 4577889999999999999999999999999998887643 3455699999999999999988888765
No 145
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism]
Probab=98.03 E-value=4.7e-05 Score=81.63 Aligned_cols=55 Identities=16% Similarity=0.443 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 107 YITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 107 Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
+..|+|++++++||+|||++.|.|..+++++|++.++|+-++..+++.++..+..
T Consensus 116 f~~al~fs~tv~TTIGYG~i~P~T~~Gr~~~i~YaliGIPl~li~l~~~g~~l~~ 170 (433)
T KOG1418|consen 116 FSSALLFSITVITTIGYGNIAPRTDAGRLFTILYALVGIPLMLLILADIGKFLAD 170 (433)
T ss_pred cchhHhhhhheeeeccCCcccCCcCcchhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 6779999999999999999999999999999999999999999999999998865
No 146
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.97 E-value=1.4e-05 Score=88.00 Aligned_cols=128 Identities=22% Similarity=0.163 Sum_probs=96.0
Q ss_pred cccchhhhhhhhhHhHHhccCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH-hcCCCCcccCCCCCc
Q 006072 371 FHISKHEAELALKVNSAAYHGDLYQLEGLIRA-GADPNRTDYDGRSPLHLAASRGYEEIMTFLI-QKGVDINLKDNFGNT 448 (662)
Q Consensus 371 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t 448 (662)
.........+.+-+|.++..+..-.++.+++. |......|.+|.-.+|+ |..++.+.+-+|+ -+|..++.+|..|+|
T Consensus 565 ~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~t 643 (975)
T KOG0520|consen 565 NLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWT 643 (975)
T ss_pred hccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCc
Confidence 34445566778889999999999999988886 66666667777778888 5555566655554 468889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCcc--------cccchHHHHHHHcCCHHHHHHHHHc
Q 006072 449 PLLEAIKYGNDGAASLLVKEGASLNV--------EEAGSFLCTAVARGDSDLLKRVLSN 499 (662)
Q Consensus 449 ~L~~A~~~~~~~~v~~Ll~~g~~~~~--------~~~~~~l~~A~~~~~~~~v~~Ll~~ 499 (662)
|||+|+..|+..++..|++.|++... ..|.|+-..|..+|+..+.-+|-+.
T Consensus 644 pL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 644 PLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred ccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 99999999999999999988765432 2366677777777777776666654
No 147
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.96 E-value=1.9e-05 Score=69.47 Aligned_cols=69 Identities=22% Similarity=0.232 Sum_probs=62.2
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcC-CCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCC
Q 006072 403 GADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKG-VDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGAS 471 (662)
Q Consensus 403 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 471 (662)
+.++|.+|..|||||+.|+..|..+.+.+|+.+| +.+...|..|.+++.+|-+.|..++++.|.+...+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 4678999999999999999999999999999999 88999999999999999999999999999887433
No 148
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.92 E-value=1.5e-05 Score=88.67 Aligned_cols=78 Identities=35% Similarity=0.419 Sum_probs=41.5
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccc--ccchHHHHHHHcC
Q 006072 411 YDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARG 488 (662)
Q Consensus 411 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~~l~~A~~~~ 488 (662)
..|.|+||.|+..|..-++++|+++|+++|..|..|.||+|.+...|+...+..|+++|++++.. ++..++++|....
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA 733 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence 34555555555555555555555555555555555555555555555555555555555554442 3445555554443
No 149
>KOG3827 consensus Inward rectifier K+ channel [Inorganic ion transport and metabolism]
Probab=97.77 E-value=0.00018 Score=70.90 Aligned_cols=100 Identities=17% Similarity=0.266 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCceEEeeccCCCCCcchhhccchHHHHHHHHHHHHHHhhcccCCC
Q 006072 49 RIVKLIAVELYCSHIAACIFYYLATTLPPEQ---EGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGD 125 (662)
Q Consensus 49 ~~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygd 125 (662)
+++.+...+++.+.+||++||+|+....+-. .+.+|.++... ...+..||-|++-|=||+|||-
T Consensus 65 ~lliF~~sf~~SWl~Fg~iwwlIA~~hGDL~~~~~~~~~tpCV~n-------------V~sf~sAFLFSiETQtTIGYG~ 131 (400)
T KOG3827|consen 65 MLLIFSLSFVLSWLFFGVIWWLIAYAHGDLEPDPPGENHTPCVMN-------------VHSFTSAFLFSIETQTTIGYGF 131 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccCCCCcCCCcceee-------------ccchhhhheeeeeeeeeeeccc
Confidence 4566666667777779999999996633211 12334333211 1357789999999999999997
Q ss_pred --cccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 126 --VHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 126 --i~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
++...+...+..++=+++|+++-++++|.+..=+..
T Consensus 132 R~vTeeCP~aI~ll~~Q~I~g~ii~afm~G~i~aKiar 169 (400)
T KOG3827|consen 132 RYVTEECPEAIFLLVLQSILGVIINAFMVGAIFAKIAR 169 (400)
T ss_pred cccCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 566677777888888999999999999987765544
No 150
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]
Probab=97.66 E-value=0.00023 Score=68.27 Aligned_cols=56 Identities=25% Similarity=0.459 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhhcccCCCcccCCh-------hhHH-HHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 106 SYITSMYASVVTMTTVGYGDVHAVNL-------REMV-FIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 106 ~Y~~s~yw~~~t~ttvGygdi~p~~~-------~e~~-~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
.|++|+||-++|+||+|+||.++... .+++ +..+++++|..+++-.++.+.-.+..
T Consensus 186 syfds~YyCFITltTIGFGDyValQ~~~alq~qplYv~~sf~fIL~Gl~vi~a~~NllvLrf~t 249 (350)
T KOG4404|consen 186 SYFDSYYYCFITLTTIGFGDYVALQQDAALQSQPLYVFFSFVFILLGLCVIYALLNLLVLRFMT 249 (350)
T ss_pred chhhhhheeeeeeeeccccchhhhcchhhhhCCCceehHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999999999887643 4554 46677888998888888776665544
No 151
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=97.60 E-value=0.00025 Score=76.74 Aligned_cols=109 Identities=20% Similarity=0.303 Sum_probs=92.9
Q ss_pred HHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccch-hhh---ccCC---ccce
Q 006072 245 NQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV-SIL---CNIP---QPYT 317 (662)
Q Consensus 245 ~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~-~~l---~~~~---~~~~ 317 (662)
.+++..++...+..|++|++-|+.++.+|.+.+|.++++....+|++..+....+|+.|-.. +++ .+.| +...
T Consensus 109 l~L~rh~~t~~l~~Gd~i~~~~~~dd~i~vv~sg~l~v~~~~~~g~~~llk~V~~G~~~tSllSiLd~l~~~ps~~~~i~ 188 (1158)
T KOG2968|consen 109 LELDRHIETLSLDAGDYIFKPGESDDSIYVVISGELTVHIRNGDGKEYLLKTVPPGGSFTSLLSILDSLPGFPSLSRTIA 188 (1158)
T ss_pred eeechhhhhhcccCCceeccCCCCCceEEEEeccceEEEecCCCCceeeEeeccCCCchHhHHHHHHhccCCCcccceee
Confidence 34558889999999999999999999999999999999988889999999999999666542 333 3444 5789
Q ss_pred EEEccceeEEEecHHHHHHHHHHhhhcHHHHHHHHh
Q 006072 318 VQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLL 353 (662)
Q Consensus 318 ~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~ 353 (662)
++|.++|.+.+++...|.+...++|+...++++-++
T Consensus 189 akA~t~~tv~~~p~~sF~~~~~k~P~s~iriiQvvm 224 (1158)
T KOG2968|consen 189 AKAATDCTVARIPYTSFRESFHKNPESSIRIIQVVM 224 (1158)
T ss_pred eeeecCceEEEeccchhhhhhccChHHHHHHHHHHH
Confidence 999999999999999999999999988777766543
No 152
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]
Probab=97.46 E-value=6.5e-05 Score=71.97 Aligned_cols=52 Identities=19% Similarity=0.378 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 106 SYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTA 157 (662)
Q Consensus 106 ~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~ 157 (662)
++.-||||+++.+||+|||.-+|.|..+++|+++..++|+-+.-.++.+++.
T Consensus 80 kF~GaFYFa~TVItTIGyGhstP~T~~GK~Fcm~Yal~Gipl~lvmFqs~gE 131 (350)
T KOG4404|consen 80 KFAGAFYFATTVITTIGYGHSTPSTDGGKAFCMFYALVGIPLTLVMFQSIGE 131 (350)
T ss_pred ccCcceEEEEEEEeeeccCCCCCCCcCceehhhhHHHhcCchHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999877777766554
No 153
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.12 E-value=0.00087 Score=67.93 Aligned_cols=73 Identities=29% Similarity=0.348 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHcCCCCCC------CCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHH
Q 006072 488 GDSDLLKRVLSNGIDPNT------RDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKL 561 (662)
Q Consensus 488 ~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~ 561 (662)
.-.+.+++|.+++++.|. .+..--|+||+|+..|..++|.+||+.|+|+..+|..|+||..+++ +.++-..
T Consensus 402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~ 478 (591)
T KOG2505|consen 402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSI 478 (591)
T ss_pred CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHH
Confidence 346788899998877753 3445679999999999999999999999999999999999999887 6666666
Q ss_pred HH
Q 006072 562 LE 563 (662)
Q Consensus 562 Ll 563 (662)
++
T Consensus 479 F~ 480 (591)
T KOG2505|consen 479 FI 480 (591)
T ss_pred HH
Confidence 65
No 154
>PF04831 Popeye: Popeye protein conserved region; InterPro: IPR006916 The Popeye (POP) family of proteins, is restricted to vertebrates and is preferentially expressed in developing and adult striated muscle. It is represented by a conserved region which includes three potential transmembrane domains []. The strong conservation of POP genes during evolution and their preferential expression in heart and skeletal muscle suggest that these novel proteins may have an important function in these tissues in vertebrates.; GO: 0016020 membrane
Probab=96.94 E-value=0.018 Score=49.64 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=85.4
Q ss_pred CCCHHHHHHHHHh-ccceeccCCCeEEecCCc-cCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhcc----
Q 006072 238 GCSSEFINQIVIR-LHEEFFLPGEVIMEKGNV-VDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCN---- 311 (662)
Q Consensus 238 ~~~~~~~~~l~~~-~~~~~~~~ge~I~~~g~~-~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~---- 311 (662)
+.+....++|+.. .+.....+|+.-..||.. .|.+-++++|++.+.. + ...+..+.|-++...-.+.+.
T Consensus 14 ~Vs~~~Fk~iv~~~~~i~~L~~~~~YAvE~~T~~drLSlLLsGr~~Vs~---~--g~fLH~I~p~qFlDSPEW~s~~~s~ 88 (153)
T PF04831_consen 14 KVSRQQFKKIVGCCCEIRTLKKGETYAVEGKTPIDRLSLLLSGRMRVSC---D--GRFLHYIYPYQFLDSPEWESLRPSE 88 (153)
T ss_pred CCCHHHHHHHHhhhceEEEecCCceeeecCCcccceEeEEEcCcEEEEE---C--CEeeEeecccccccChhhhccccCC
Confidence 5688888888888 666799999999999854 5789999999999875 3 356888888888876666553
Q ss_pred -CCccceEEEccceeEEEecHHHHHHHHHHhhhcHHH
Q 006072 312 -IPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRK 347 (662)
Q Consensus 312 -~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~ 347 (662)
..-.+|+.|.+.|..+..+|+.+..++.+.|....-
T Consensus 89 ~~~FQVTitA~~~Cryl~W~R~kL~~~l~~~~~L~~v 125 (153)
T PF04831_consen 89 DDKFQVTITAEEDCRYLCWPREKLYLLLAKDPFLAAV 125 (153)
T ss_pred CCeEEEEEEEcCCcEEEEEEHHHHHHHHhhCHHHHHH
Confidence 335689999999999999999999999988765443
No 155
>PRK11832 putative DNA-binding transcriptional regulator; Provisional
Probab=96.78 E-value=0.015 Score=53.74 Aligned_cols=96 Identities=9% Similarity=0.048 Sum_probs=76.3
Q ss_pred HHHHHHHhccceeccCCCeE-EecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEEc
Q 006072 243 FINQIVIRLHEEFFLPGEVI-MEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVC 321 (662)
Q Consensus 243 ~~~~l~~~~~~~~~~~ge~I-~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a~ 321 (662)
....+....++..+++|..+ +...+..+..|++.+|.|.+. ..+ ...+.+...-.+||-...+.+....+..+|.
T Consensus 14 L~~~L~~~g~~~~~~~~~~~i~~~~~~~~~~~ll~~G~vsir--r~d--~ll~~t~~aP~IlGl~~~~~~~~~~~~l~ae 89 (207)
T PRK11832 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR--REE--NVLIGITQAPYIMGLADGLMKNDIPYKLISE 89 (207)
T ss_pred HHHHhhccCCeEecCCCcEEeccccCCCceEEEEEeceEEEE--ecC--CeEEEeccCCeEeecccccCCCCceEEEEEc
Confidence 44566677788899999997 544444467999999999983 223 3667777888899987767666667889999
Q ss_pred cceeEEEecHHHHHHHHHHhh
Q 006072 322 ELCRLLRIDKQSFTNIIDIYF 342 (662)
Q Consensus 322 ~~~~l~~l~~~~~~~~l~~~~ 342 (662)
++|.++.++.++|.++++++.
T Consensus 90 ~~c~~~~i~~~~~~~iie~~~ 110 (207)
T PRK11832 90 GNCTGYHLPAKQTITLIEQNQ 110 (207)
T ss_pred CccEEEEeeHHHHHHHHHHhc
Confidence 999999999999999999875
No 156
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.74 E-value=0.0026 Score=38.06 Aligned_cols=27 Identities=48% Similarity=0.722 Sum_probs=16.5
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHCCCCC
Q 006072 510 LRTPLHVAASEGLYLMAKLLVEAGASV 536 (662)
Q Consensus 510 g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 536 (662)
|.||+|+|+..++.++++.|+++|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456666666666666666666665544
No 157
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.43 E-value=0.0051 Score=36.65 Aligned_cols=27 Identities=56% Similarity=0.972 Sum_probs=14.8
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhcCCCC
Q 006072 413 GRSPLHLAASRGYEEIMTFLIQKGVDI 439 (662)
Q Consensus 413 g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 439 (662)
|.||+|+|+..++.++++.|++.|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 445555555555555555555555443
No 158
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.31 E-value=0.0048 Score=62.75 Aligned_cols=64 Identities=27% Similarity=0.355 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHcCCCCCC------CCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHH
Q 006072 391 GDLYQLEGLIRAGADPNR------TDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAI 454 (662)
Q Consensus 391 g~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 454 (662)
.-.+.++.|.+++.+.|. .+.--.|+||+|+..|.-++|.+||+.|+|+...|..|.||...+.
T Consensus 402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 346778888888777643 3445679999999999999999999999999999999999998876
No 159
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=96.25 E-value=0.028 Score=50.08 Aligned_cols=44 Identities=18% Similarity=0.226 Sum_probs=23.8
Q ss_pred HHHHHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHH
Q 006072 514 LHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLE 563 (662)
Q Consensus 514 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll 563 (662)
|..|+..|-...+--.+++|.+++. ++|..|+..++..++.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence 4455555555555555555555432 4555555555555555544
No 160
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.95 E-value=0.06 Score=49.40 Aligned_cols=113 Identities=22% Similarity=0.223 Sum_probs=71.0
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCC----CCCCcHHHHHHHh--CcH
Q 006072 450 LLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRD----YDLRTPLHVAASE--GLY 523 (662)
Q Consensus 450 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~----~~g~t~L~~A~~~--~~~ 523 (662)
|.-|+...+.+-+.-++.. ..+..+++.+|+.++..+++-+|+.+- +....| ..+.--+.++... .+.
T Consensus 157 ledAV~AsN~~~i~~~Vtd-----KkdA~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a~~ 230 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTD-----KKDAHQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSASY 230 (284)
T ss_pred HHHHHhhcCHHHHHHHhcc-----hHHHHHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCCcH
Confidence 4556666665555544432 223445666677667777777776531 111111 1122223344332 366
Q ss_pred HHHHHHHHCC-CCCCC---CCCCCCChHHHHHHcCCHHHHHHHHhcccc
Q 006072 524 LMAKLLVEAG-ASVFP---KDRWGNTPLDEGRMCGNKNLIKLLEDAKST 568 (662)
Q Consensus 524 ~~v~~Ll~~g-a~~~~---~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~ 568 (662)
.+++..+++| +++|. +-+.|.|-|+-|.++++.+++.+|+++||-
T Consensus 231 kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 231 KVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 7889999998 77764 356799999999999999999999999984
No 161
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.90 E-value=0.052 Score=49.75 Aligned_cols=120 Identities=18% Similarity=0.198 Sum_probs=77.3
Q ss_pred hHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHH
Q 006072 383 KVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAA 462 (662)
Q Consensus 383 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 462 (662)
.|-.|+..-+++.+.-++... .+-.++|-+|+.++..+++.+|+.+- +....| .|-......=+
T Consensus 156 sledAV~AsN~~~i~~~VtdK-------kdA~~Am~~si~~~K~dva~~lls~f-~ft~~d--------v~~~~~~~ydi 219 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDK-------KDAHQAMWLSIGNAKEDVALYLLSKF-NFTKQD--------VASMEKELYDI 219 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcch-------HHHHHHHHHHhcccHHHHHHHHHhhc-ceecch--------hhhcCcchhhH
Confidence 456677777777776665432 12346777888788888888887741 111112 12111122234
Q ss_pred HHHHH-cCCCCcccccchHHHHHHHcCCHHHHHHHHHcC-CCCCC---CCCCCCcHHHHHHHhCcHHHHHHHHHCCCCC
Q 006072 463 SLLVK-EGASLNVEEAGSFLCTAVARGDSDLLKRVLSNG-IDPNT---RDYDLRTPLHVAASEGLYLMAKLLVEAGASV 536 (662)
Q Consensus 463 ~~Ll~-~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g-~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 536 (662)
+++++ +|+ +..++++.+++| +++|. +-+.|.|-|.-|+..++.+++.+||++||-.
T Consensus 220 eY~LS~h~a------------------~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 220 EYLLSEHSA------------------SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred HHHHhhcCC------------------cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 44443 333 346888888887 56664 3467999999999999999999999999853
No 162
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.80 E-value=0.13 Score=45.84 Aligned_cols=137 Identities=15% Similarity=0.080 Sum_probs=97.1
Q ss_pred hhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHH
Q 006072 381 ALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDG 460 (662)
Q Consensus 381 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 460 (662)
..-+..|++.+-+.+++..-+...+- -...++..-.||+..+.|+|+|+-+. +...+ -.+-...|....+..
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qn---L~i~~--~~~iFdIA~~~kDls 118 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQN---LHIYN--PEDIFDIAFAKKDLS 118 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhc---cCCCC--chhhhhhhhhccchh
Confidence 45678899999999988876653321 23567788899999999999999442 22222 235667788777776
Q ss_pred HH----HHHHHcCCCCcccccc----hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHH
Q 006072 461 AA----SLLVKEGASLNVEEAG----SFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVE 531 (662)
Q Consensus 461 ~v----~~Ll~~g~~~~~~~~~----~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 531 (662)
+. +++.++..+....+.. .-|..|+..|-...+...+++|.+++. ++|..|+..++..++.+++.
T Consensus 119 LyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 119 LYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 53 2344443222111111 337889999999999999999988864 89999999999999998874
No 163
>KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=95.74 E-value=0.026 Score=59.55 Aligned_cols=113 Identities=16% Similarity=0.291 Sum_probs=84.9
Q ss_pred HHHHHHhcccccccCCCHHHHHHHHHhccceec-cCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCcc
Q 006072 224 TLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFF-LPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSS 302 (662)
Q Consensus 224 ~~~~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~-~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~ 302 (662)
+...+++...|-|.+++....++||..|....+ ..|.+|...|+.-|..+.|++|.|++.. .+|+. ..+.-|+.
T Consensus 277 eqLLeFMhqlpAFAnmtMSvrReLC~vMvFaVVe~AGtivL~dgeeLDSWsVIlNG~VEv~~--PdGk~---e~l~mGnS 351 (1283)
T KOG3542|consen 277 EQLLEFMHQLPAFANMTMSVRRELCLVMVFAVVEDAGTIVLADGEELDSWSVILNGCVEVVK--PDGKR---EELKMGNS 351 (1283)
T ss_pred HHHHHHHHhchHhhcccHHHHHHHHHHHHHHHHhhcCeEEecCCcccceeEEEecceEEEec--CCCce---EEeecccc
Confidence 445567778899999999999999999877644 5699999999999999999999999986 34443 23677999
Q ss_pred ccchhhhccCCccceEE-EccceeEEEecHHHHHHHHHHh
Q 006072 303 FGEVSILCNIPQPYTVQ-VCELCRLLRIDKQSFTNIIDIY 341 (662)
Q Consensus 303 fGe~~~l~~~~~~~~~~-a~~~~~l~~l~~~~~~~~l~~~ 341 (662)
||-..-....-..-..+ -..+|++.++..+++-.++..-
T Consensus 352 FG~~PT~dkqym~G~mRTkVDDCqFVciaqqDycrIln~v 391 (1283)
T KOG3542|consen 352 FGAEPTPDKQYMIGEMRTKVDDCQFVCIAQQDYCRILNTV 391 (1283)
T ss_pred cCCCCCcchhhhhhhhheecccceEEEeehhhHHHHHHHH
Confidence 99754333222111122 3568999999999998877543
No 164
>PLN03223 Polycystin cation channel protein; Provisional
Probab=94.82 E-value=0.71 Score=53.71 Aligned_cols=47 Identities=9% Similarity=-0.004 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 006072 17 RYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAA 65 (662)
Q Consensus 17 ~~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~H~~a 65 (662)
-++.++|++|++|+.+.+..+...+ ......++.+++++++++-.+|
T Consensus 1299 IFLsiLKfLRLLRFNPrL~vLt~TL--rrAapDLa~F~IIF~IVF~AFA 1345 (1634)
T PLN03223 1299 IILLLGRILKLMDFQPRLGVITRTL--WLAGADLMHFFVIFGMVFVGYA 1345 (1634)
T ss_pred HHHHHHHHHHHhccChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666666655555544332 2233345555544444443344
No 165
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism]
Probab=94.73 E-value=0.0071 Score=64.76 Aligned_cols=47 Identities=26% Similarity=0.508 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhhcccCCCcccCChhhH--------HHHHHHHHHHHHHHHHHH
Q 006072 106 SYITSMYASVVTMTTVGYGDVHAVNLREM--------VFIMIYVSFDMILGAYLI 152 (662)
Q Consensus 106 ~Y~~s~yw~~~t~ttvGygdi~p~~~~e~--------~~~i~~~~~g~~~~~~~i 152 (662)
.|+.|+|++++++||+||||+.|.+...+ .+..++.++|...++.+.
T Consensus 242 ~f~~~~Yf~fisltTIG~GD~vp~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 296 (433)
T KOG1418|consen 242 SFIEAFYFSFISLTTIGFGDIVPRTLLGRFRREELVDPLASVWILSGLALLALVL 296 (433)
T ss_pred eeEeeeeEEEEEeeeecCCccccCCCcceeeccccccchhHHHHHhhhhHHHHHh
Confidence 37889999999999999999999998866 577788888888887776
No 166
>KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=93.57 E-value=0.1 Score=55.24 Aligned_cols=90 Identities=13% Similarity=0.194 Sum_probs=72.6
Q ss_pred HHhcccccccCCCHHHHHHHHHhccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchh
Q 006072 228 PYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVS 307 (662)
Q Consensus 228 ~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~ 307 (662)
..+.....|+++-..-+..++.......++...++|+.|+.+++.|++++|.|-+.. ..+.|-.+||.-
T Consensus 37 ~~lh~ld~~snl~~~~lk~l~~~aryer~~g~~ilf~~~~var~wyillsgsv~v~g----------qi~mp~~~fgkr- 105 (1283)
T KOG3542|consen 37 EQLHQLDTFSNLFIGPLKALCKTARYERHPGQYILFRDGDVARSWYILLSGSVFVEG----------QIYMPYGCFGKR- 105 (1283)
T ss_pred HHHhhhhhhhhhhhhhHHHhhhhhhhhcCCCceEEecccchhhheeeeeccceEeec----------ceecCccccccc-
Confidence 355667788888889999999999999999999999999999999999999987643 123444457753
Q ss_pred hhccCCccceEEEccceeEEEec
Q 006072 308 ILCNIPQPYTVQVCELCRLLRID 330 (662)
Q Consensus 308 ~l~~~~~~~~~~a~~~~~l~~l~ 330 (662)
.|..|..++-.++.++..+++
T Consensus 106 --~g~~r~~nclllq~semivid 126 (1283)
T KOG3542|consen 106 --TGQNRTHNCLLLQESEMIVID 126 (1283)
T ss_pred --cccccccceeeecccceeeee
Confidence 366788888889999888873
No 167
>KOG3193 consensus K+ channel subunit [Inorganic ion transport and metabolism]
Probab=92.49 E-value=0.12 Score=53.31 Aligned_cols=52 Identities=25% Similarity=0.349 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 107 YITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTAL 158 (662)
Q Consensus 107 Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~ 158 (662)
.+.|+||.++|.+||||||..|.-....++.++++-++.++.---+-.++..
T Consensus 218 lf~s~y~v~vtfstvgygd~~pd~w~sql~~vi~icval~~ip~q~~~l~~t 269 (1087)
T KOG3193|consen 218 LFTSFYFVMVTFSTVGYGDWYPDYWASQLCVVILICVALGLIPKQLDELGQT 269 (1087)
T ss_pred eeeeEEEEEEEEeeccccccccccchhhHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3569999999999999999999988888877766666666555555555443
No 168
>KOG2302 consensus T-type voltage-gated Ca2+ channel, pore-forming alpha1I subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=92.27 E-value=2.6 Score=47.40 Aligned_cols=24 Identities=17% Similarity=0.231 Sum_probs=13.4
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHH
Q 006072 14 EAVRYLLWIRLYRVRKVSQFFHKM 37 (662)
Q Consensus 14 ~~~~~lrl~rllRl~~~~~~~~~~ 37 (662)
+.++.+|.+|++|-+|..|.+.+.
T Consensus 1220 kILgVlrvLRlLRtlRpLRviSra 1243 (1956)
T KOG2302|consen 1220 KILGVLRVLRLLRTLRPLRVISRA 1243 (1956)
T ss_pred HHHHHHHHHHHHHHhhHHHHHhhc
Confidence 455555566666555555554444
No 169
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=90.45 E-value=1.3 Score=41.19 Aligned_cols=130 Identities=14% Similarity=0.061 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceEEeeccCCCCCcc
Q 006072 17 RYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYA 96 (662)
Q Consensus 17 ~~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~ 96 (662)
..+++.|++|+.|+.+.++..+..........+.++-+...+++.+++.+.+..++.....+.....+ +.. .
T Consensus 60 ~~~~~~~~l~~~R~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~lf~~~~~~~~-------~~~-~ 131 (200)
T PF00520_consen 60 SLLRIFRLLRLLRLLRLLRRFRSLRRLLRALIRSFPDLFKFILLLFIVLLFFACIGYQLFGGSDNSCC-------DPT-W 131 (200)
T ss_dssp HCHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS---------------S
T ss_pred ceEEEEEeeccccccccccccccccccccccccccccccccccccccccccccchhheeccccccccc-------ccc-c
Confidence 46788888888888888888777666666677788888888888888888888777653332211000 000 1
Q ss_pred hhhccchHHHHHHHHHHHHHHhhcccCCCcccCChhh-----HHHHHHHHHHHHHHHHHHHHH
Q 006072 97 DFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLRE-----MVFIMIYVSFDMILGAYLIGN 154 (662)
Q Consensus 97 ~~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e-----~~~~i~~~~~g~~~~~~~i~~ 154 (662)
...+.........++..+..++...--|+--+..... .....++.++..++.++++.+
T Consensus 132 ~~~~~~~~~~~f~~~~~s~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~n 194 (200)
T PF00520_consen 132 DSENDIYGYENFDSFGESLYWLFQTMTGEGWGDVMPSCMSARSWLAVIFFISFIIIVSILLLN 194 (200)
T ss_dssp S----SSTHHHHSSHHHHHHHHHHHHTTTTCCCCHHHHHHTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCccccccccccccchhHhHHhhhhhhhHHHHHHH
Confidence 1223344566777888888888777667766666655 345555554555555544443
No 170
>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=90.12 E-value=3.9 Score=49.94 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=27.2
Q ss_pred chhhHHHHHHHHHHHHhHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHH
Q 006072 13 KEAVRYLLWIRLYRVRKVSQFFHKMEKDIR-INYMFSRIVKLIAVELYC 60 (662)
Q Consensus 13 ~~~~~~lrl~rllRl~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 60 (662)
...+.++|.+|++|++|+.+....+++... +..+...+..|++.++++
T Consensus 527 ~~g~svLr~frllRIfkl~k~wp~l~~lv~~i~ns~~~l~~L~l~l~i~ 575 (1592)
T KOG2301|consen 527 VYGLSVLRSFRLLRIFKLIKSWPTLNDLVKSIFNSGKALGNLVLFLFIF 575 (1592)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 346677777777777777777666665433 222233444444444443
No 171
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=88.70 E-value=46 Score=37.59 Aligned_cols=45 Identities=13% Similarity=0.268 Sum_probs=35.9
Q ss_pred HhhchHHHHHHHHHHHHHHHhc-----ccccccCCCHHHHHHHHHhccce
Q 006072 210 LQDIPISIRAKISQTLYLPYIE-----KVPLFKGCSSEFINQIVIRLHEE 254 (662)
Q Consensus 210 l~~Lp~~L~~~i~~~~~~~~l~-----~~~~f~~~~~~~~~~l~~~~~~~ 254 (662)
..+||+.||+.|..+...++.. ...++++++++..++|+.++-..
T Consensus 370 ~~~LP~~LRqRi~~y~q~kw~~t~Gvdee~lL~~LP~~LR~dI~~hL~~~ 419 (727)
T KOG0498|consen 370 RRQLPPDLRQRIRRYEQYKWLATRGVDEEELLQSLPKDLRRDIKRHLCLD 419 (727)
T ss_pred hccCCHHHHHHHHHHHHHHHhhccCcCHHHHHHhCCHHHHHHHHHHHhHH
Confidence 4579999999999888776654 45688899999999988887444
No 172
>PF00060 Lig_chan: Ligand-gated ion channel; InterPro: IPR001320 The ability of synapses to modify their synaptic strength in response to activity is a fundamental property of the nervous system and may be an essential component of learning and memory. There are three classes of ionotropic glutamate receptor, namely NMDA (N-methyl-D-aspartate), AMPA (alpha-amino-3-hydroxy-5-methyl-4-isoxazole-4-propionic acid) and kainate receptors. They are believed to play critical roles in synaptic plasticity. At many synapses in the brain, transient activation of NMDA receptors leads to a persistent modification in the strength of synaptic transmission mediated by AMPA receptors and kainate receptors can act as the induction trigger for long-term changes in synaptic transmission [].; GO: 0004970 ionotropic glutamate receptor activity, 0005234 extracellular-glutamate-gated ion channel activity, 0016020 membrane; PDB: 3FAT_A 3KFM_A 3KEI_A 3EN3_A 3EPE_B 3FAS_A 2F34_A 3C34_B 3S2V_A 3GBB_B ....
Probab=87.85 E-value=0.83 Score=40.37 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 104 WKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 104 ~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
......++|+++.+++. +-++..|.+...|++.+++.++++++.++..+++++++..
T Consensus 42 ~~~~~~~~~~~~~~~~~-q~~~~~~~s~s~Ril~~~w~l~~lil~~~Yta~L~s~Lt~ 98 (148)
T PF00060_consen 42 RFSLSNSFWYTFGTLLQ-QGSSIRPRSWSGRILLAFWWLFSLILIASYTANLTSFLTV 98 (148)
T ss_dssp HHHHHHHHHHCCCCCHH-HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHhhcc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 35677788888888776 4377999999999999999999999999999999999866
No 173
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=85.71 E-value=1.5 Score=33.73 Aligned_cols=17 Identities=29% Similarity=0.342 Sum_probs=7.2
Q ss_pred HHHHHHcCcHHHHHHHH
Q 006072 417 LHLAASRGYEEIMTFLI 433 (662)
Q Consensus 417 L~~A~~~~~~~~v~~Ll 433 (662)
+..|+..|+.|+++.++
T Consensus 10 l~~Ai~GGN~eII~~c~ 26 (76)
T PF11929_consen 10 LEYAIIGGNFEIINICL 26 (76)
T ss_pred HHHHHhCCCHHHHHHHH
Confidence 34444444444444443
No 174
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=84.29 E-value=1.6 Score=33.57 Aligned_cols=48 Identities=19% Similarity=0.281 Sum_probs=40.4
Q ss_pred hhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhc
Q 006072 381 ALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQK 435 (662)
Q Consensus 381 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 435 (662)
..-+..|+..|+.|+++.+++.+ .++ ...+..|+...+.+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 34578999999999999999765 222 4579999999999999999986
No 175
>KOG1053 consensus Glutamate-gated NMDA-type ion channel receptor subunit GRIN2A and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=83.74 E-value=17 Score=40.85 Aligned_cols=47 Identities=15% Similarity=0.265 Sum_probs=36.6
Q ss_pred HHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 111 MYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALI 159 (662)
Q Consensus 111 ~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~ 159 (662)
+.|+++---||- --.|..+..++.+.++.++++++.|...++++.++
T Consensus 616 llwaLvFnnsVp--v~nPKgtTskiMv~VWAfFavifLAsYTANLAAfM 662 (1258)
T KOG1053|consen 616 LLWALVFNNSVP--VENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFM 662 (1258)
T ss_pred HHHHHHhCCCcC--CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 448887554443 23567788999999999999999999888888876
No 176
>KOG4440 consensus NMDA selective glutamate-gated ion channel receptor subunit GRIN1 [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=83.65 E-value=2.9 Score=44.53 Aligned_cols=98 Identities=22% Similarity=0.258 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceEEeeccCCCCCcchhhccchHHHHHHHHHHHHHHhhcccCCCcccCCh
Q 006072 52 KLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNL 131 (662)
Q Consensus 52 ~l~~~~~~~~H~~aC~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~ttvGygdi~p~~~ 131 (662)
.+++.+.+.+|..|-..|.+-..-+.+.. ...+.. . +.+---..-.++||+-..+..-|-|+-+|.+-
T Consensus 571 tLW~lv~~SVhvVal~lYlLDrfSPFgRF--------k~~ds~-~---~ee~alnlssAmWF~WGVLLNSGigEgtPRSf 638 (993)
T KOG4440|consen 571 TLWLLVGLSVHVVALMLYLLDRFSPFGRF--------KVNDSE-E---EEEDALNLSSAMWFSWGVLLNSGIGEGTPRSF 638 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccce--------eeccCc-c---chhhhcchhhhHHHHhHhhhccccCCCCCcch
Confidence 36677778889999998888765332210 000000 0 00001234568898888888888889999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 132 REMVFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 132 ~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
.-+++.+++.-+.+++.|-..++++.++.-
T Consensus 639 SARvLGmVWaGFaMIiVASYTANLAAFLVL 668 (993)
T KOG4440|consen 639 SARVLGMVWAGFAMIIVASYTANLAAFLVL 668 (993)
T ss_pred hHHHHHHHHhhhheeeehhhhhhhhhheee
Confidence 999999999999998888888888887744
No 177
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=79.40 E-value=87 Score=33.73 Aligned_cols=49 Identities=12% Similarity=0.368 Sum_probs=32.5
Q ss_pred HhhchHHHHHHHHHHHHHHHh-----cccccccCCCHHHHHHHHHhccceeccC
Q 006072 210 LQDIPISIRAKISQTLYLPYI-----EKVPLFKGCSSEFINQIVIRLHEEFFLP 258 (662)
Q Consensus 210 l~~Lp~~L~~~i~~~~~~~~l-----~~~~~f~~~~~~~~~~l~~~~~~~~~~~ 258 (662)
|.+.|+.|-+.+..+....+- ..-..+..++.+....||.++....|..
T Consensus 499 L~evPK~LsERVMDYvVSTWaMtkGiDTeKVL~~CPKDMkADICVHLNRKVFnE 552 (971)
T KOG0501|consen 499 LYEVPKGLSERVMDYVVSTWAMTKGIDTEKVLGYCPKDMKADICVHLNRKVFNE 552 (971)
T ss_pred HHhccHHHHHHHHHHHHHHhhhhcCcCHHHHhhhCccccccceeeecchhhhcc
Confidence 567899998888877765432 2223455566677777777777776654
No 178
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=76.90 E-value=7.3 Score=29.81 Aligned_cols=49 Identities=20% Similarity=0.422 Sum_probs=37.6
Q ss_pred cCCcHHHHHHHHHhHcCC--CCCcccccCCCceeee---eeeeecCCeEEEeec
Q 006072 612 IPQNIKDLIKTAAEQLDF--RGGDCILSSEGGKILD---VDMINDDQKLYLIQE 660 (662)
Q Consensus 612 l~~~~~el~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~r~~~~~~~~~~ 660 (662)
.-.+++|++..+.++|.. .+..-++.+||.+++| +...-|+..+.++.+
T Consensus 19 ~A~sL~eL~~K~~~~l~l~~~~~~lvL~eDGTeVddEeYF~tLp~nT~l~~l~~ 72 (78)
T cd01615 19 AASSLEELLSKACEKLKLPSAPVTLVLEEDGTEVDDEEYFQTLPDNTVLMLLEP 72 (78)
T ss_pred EcCCHHHHHHHHHHHcCCCCCCeEEEEeCCCcEEccHHHHhcCCCCcEEEEECC
Confidence 457899999999999998 3333446678999966 778888887777654
No 179
>COG4709 Predicted membrane protein [Function unknown]
Probab=73.94 E-value=24 Score=31.96 Aligned_cols=75 Identities=21% Similarity=0.318 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHhhh----ccHhHHHhhc--hHHHHHHHHHHHHHHHhcccccccCCCHHH
Q 006072 170 DKMTDLMKYINRNRLGRDIRDQIIGHLRLQYESS----YTEASVLQDI--PISIRAKISQTLYLPYIEKVPLFKGCSSEF 243 (662)
Q Consensus 170 ~~~~~~~~~m~~~~l~~~l~~~i~~~~~~~~~~~----~~~~~~l~~L--p~~L~~~i~~~~~~~~l~~~~~f~~~~~~~ 243 (662)
+=+++++.|++ ++|++.++++..+|+-.+.+. ++|.++.++| |+++-.|+..+.-.+-.+.-|-+.+.+...
T Consensus 5 efL~eL~~yL~--~Lp~~~r~e~m~dyeehF~~a~~~GksE~EI~~~LG~P~eiA~ei~s~~~~k~~~~~~~~~n~~~ai 82 (195)
T COG4709 5 EFLNELEQYLE--GLPREERREIMYDYEEHFREAQEAGKSEEEIAKDLGDPKEIAAEILSERGIKKEEVKPTQKNVRRAI 82 (195)
T ss_pred HHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHhCCHHHHHHHHHHHccchHHhccCcccchHHHH
Confidence 34566777765 689999999999888777543 6799999998 888888888777777777767776665544
Q ss_pred HHH
Q 006072 244 INQ 246 (662)
Q Consensus 244 ~~~ 246 (662)
+..
T Consensus 83 i~~ 85 (195)
T COG4709 83 IAL 85 (195)
T ss_pred HHH
Confidence 433
No 180
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=73.12 E-value=12 Score=28.83 Aligned_cols=49 Identities=20% Similarity=0.420 Sum_probs=37.6
Q ss_pred cCCcHHHHHHHHHhHcCCCCCccc-ccCCCceeee---eeeeecCCeEEEeec
Q 006072 612 IPQNIKDLIKTAAEQLDFRGGDCI-LSSEGGKILD---VDMINDDQKLYLIQE 660 (662)
Q Consensus 612 l~~~~~el~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~r~~~~~~~~~~ 660 (662)
.-.+++|++..+.+.+..+.+..+ +.+||.+++| +...-|+..+.+.+.
T Consensus 19 ~A~sL~EL~~K~~~~L~~~~~~~lvLeeDGT~Vd~EeyF~tLpdnT~lm~L~~ 71 (81)
T cd06537 19 TAASLQELLAKALETLLLSGVLTLVLEEDGTAVDSEDFFELLEDDTCLMVLEQ 71 (81)
T ss_pred EccCHHHHHHHHHHHhCCCCceEEEEecCCCEEccHHHHhhCCCCCEEEEECC
Confidence 457899999999999887654454 5556888866 888888888887754
No 181
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=71.77 E-value=12 Score=28.66 Aligned_cols=49 Identities=12% Similarity=0.323 Sum_probs=37.6
Q ss_pred cCCcHHHHHHHHHhHcCCC--CCcccccCCCceeee---eeeeecCCeEEEeec
Q 006072 612 IPQNIKDLIKTAAEQLDFR--GGDCILSSEGGKILD---VDMINDDQKLYLIQE 660 (662)
Q Consensus 612 l~~~~~el~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~r~~~~~~~~~~ 660 (662)
.-.+++|++..+.+.+... +..-++.+||.+++| +...-|+.++.+.+.
T Consensus 19 ~A~sL~EL~~K~~~~l~~~~~~~~lvL~eDGT~Vd~EeyF~~LpdnT~lm~L~~ 72 (78)
T cd06539 19 MASSLQELISKTLDALVITSGLVTLVLEEDGTVVDTEEFFQTLGDNTHFMVLEK 72 (78)
T ss_pred EecCHHHHHHHHHHHhCCCCCCcEEEEeCCCCEEccHHHHhhCCCCCEEEEECC
Confidence 4578999999999999874 334446778888866 788888888877664
No 182
>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys. Cyst development is associated with impairment of kidney function, and ultimately kidney failure and death []. Most cases of autosomal dominant PKD result from mutations in the PKD1 gene that cause premature protein termination. A second gene for autosomal dominant polycystic kidney disease has been identified by positional cloning []. The predicted 968-amino acid sequence of the PKD2 gene product (polycystin-2) contains 6 transmembrane domains, with intracellular N- and C-termini. Polycystin-2 shares some similarity with the family of voltage-activated calcium (and sodium) channels, and contains a potential calcium-binding domain. Polycystin-2 is strongly expressed in ovary, foetal and adult kidney, testis, and small intestine. Polycystin-1 requires the presence of this protein for stable expression and is believed to interact with it via its C terminus. All mutations between exons 1 and 11 result in a truncated polycystin-2 that lacks a calcium-binding EF-hand domain and the cytoplasmic domains required for the interaction of polycystin-2 with polycystin-1 []. PKD2, although clinically milder than PKD1, has a deleterious impact on life expectancy. This entry contains proteins belonging to the polycystin family including Mucolipin and Polycystin-1 and -2 (PKD1 and PKD2). The domain contains the cation channel region of PKD1 and PKD2 proteins. PKD1 and PKD2 may function through a common signalling pathway that is necessary for normal tubulogenesis. The PKD2 gene product has six transmembrane spans with intracellular amino- and carboxyl-termini []. Mucolipin is a cationic channel which probably plays a role in the endocytic pathway and in the control of membrane trafficking of proteins and lipids. It could play a major role in the calcium ion transport regulating lysosomal exocytosis [, , ].
Probab=71.06 E-value=46 Score=35.40 Aligned_cols=50 Identities=18% Similarity=0.351 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 18 YLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFY 69 (662)
Q Consensus 18 ~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~H~~aC~~~ 69 (662)
++-++|++|++|..+.+..+...+.. ....++.+.+.++++.--+|++.+
T Consensus 305 fl~~lrll~~l~f~~~~~~~~~tl~~--a~~~l~~f~~~~~i~~~~fa~~g~ 354 (425)
T PF08016_consen 305 FLLWLRLLKLLRFNRRLSLLSRTLRR--AAKDLLGFFVIFLIIFLAFAQAGY 354 (425)
T ss_pred HHHHHHHhhheeecchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666655555555544443332 233444444444444333444433
No 183
>PLN03223 Polycystin cation channel protein; Provisional
Probab=69.33 E-value=2.7e+02 Score=33.87 Aligned_cols=21 Identities=10% Similarity=0.059 Sum_probs=12.2
Q ss_pred CCCHHHHHHHHHhccceeccC
Q 006072 238 GCSSEFINQIVIRLHEEFFLP 258 (662)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~ 258 (662)
+++++-+.++....-...|..
T Consensus 1499 ~~d~~~l~~v~~~c~~~~~~~ 1519 (1634)
T PLN03223 1499 ELDEAGLKRVLRRCVIETYQK 1519 (1634)
T ss_pred hhhHHHHHHHHHHHHHhhhcc
Confidence 456666666666655555543
No 184
>KOG2302 consensus T-type voltage-gated Ca2+ channel, pore-forming alpha1I subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=68.64 E-value=10 Score=42.92 Aligned_cols=52 Identities=13% Similarity=0.246 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhhccc---------CCCcccCChhhHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 006072 108 ITSMYASVVTMTTVG---------YGDVHAVNLREMVFIMIYVSFDM-ILGAYLIGNMTALI 159 (662)
Q Consensus 108 ~~s~yw~~~t~ttvG---------ygdi~p~~~~e~~~~i~~~~~g~-~~~~~~i~~i~~~~ 159 (662)
..|+.|+++|..-+| |.....++..--.+.+..|-+|- +.|-..++.+..-+
T Consensus 785 fdsllwaivTvfqilTqedwn~vLyngmastSswa~lyfvAlmtfGnYvlfnllvailvEgF 846 (1956)
T KOG2302|consen 785 FDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAPLYFVALMTFGNYVLFNLLVAILVEGF 846 (1956)
T ss_pred cchHHHHHHHHHhhhcccccchhhhcCccccCCcchhHHHHhhhccceeeeccchhhhhhhc
Confidence 358999999887665 44455555555555666665554 44444444333333
No 185
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel). ; PDB: 2OPK_C 3BU7_B 2PHD_D 3NVC_A 3NKT_A 3NJZ_A 3NW4_A 3NST_A 3NL1_A 2H0V_A ....
Probab=68.57 E-value=13 Score=27.65 Aligned_cols=66 Identities=18% Similarity=0.188 Sum_probs=39.2
Q ss_pred eeccCCCeEEecCCccC-eEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEEccceeEEE
Q 006072 254 EFFLPGEVIMEKGNVVD-QLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLR 328 (662)
Q Consensus 254 ~~~~~ge~I~~~g~~~~-~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a~~~~~l~~ 328 (662)
..++||+.+-..-.... ++++|++|++.+.. ++. ...+++|+.+=- =.+.+..+.....++|.++.
T Consensus 3 ~~~~pG~~~~~h~H~~~~e~~~vl~G~~~~~~---~~~---~~~l~~Gd~~~i---~~~~~H~~~n~~~~~~~~l~ 69 (71)
T PF07883_consen 3 VTLPPGGSIPPHRHPGEDEFFYVLSGEGTLTV---DGE---RVELKPGDAIYI---PPGVPHQVRNPGDEPARFLV 69 (71)
T ss_dssp EEEETTEEEEEEEESSEEEEEEEEESEEEEEE---TTE---EEEEETTEEEEE---ETTSEEEEEEESSSEEEEEE
T ss_pred EEECCCCCCCCEECCCCCEEEEEEECCEEEEE---ccE---EeEccCCEEEEE---CCCCeEEEEECCCCCEEEEE
Confidence 45778887665555555 89999999998763 333 345788885421 11344444444444455544
No 186
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=66.31 E-value=17 Score=27.51 Aligned_cols=49 Identities=14% Similarity=0.366 Sum_probs=37.7
Q ss_pred cCCcHHHHHHHHHhHcCCC--CCcccccCCCceeee---eeeeecCCeEEEeec
Q 006072 612 IPQNIKDLIKTAAEQLDFR--GGDCILSSEGGKILD---VDMINDDQKLYLIQE 660 (662)
Q Consensus 612 l~~~~~el~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~r~~~~~~~~~~ 660 (662)
.-.+++|++..+.++|..+ +..-++.+||.+++| +...-|+..+.++++
T Consensus 17 ~A~sL~eL~~K~~~~l~l~~~~~~l~L~eDGT~VddEeyF~tLp~nt~l~~L~~ 70 (74)
T smart00266 17 AASSLEELLSKVCDKLALPDSPVTLVLEEDGTIVDDEEYFQTLPDNTELMALEK 70 (74)
T ss_pred EcCCHHHHHHHHHHHhCCCCCCcEEEEecCCcEEccHHHHhcCCCCcEEEEEcC
Confidence 4578999999999999986 333346678999976 777888887777654
No 187
>KOG1052 consensus Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=66.11 E-value=26 Score=39.78 Aligned_cols=53 Identities=19% Similarity=0.296 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 108 ITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 108 ~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
..++|.++.++..-| ++..|.+...+++..++.+++.++.+..-+++++++..
T Consensus 383 ~~~~~~~~~~~~~q~-~~~~p~~~~~Rll~~~w~~~~lil~ssYTa~L~a~Lt~ 435 (656)
T KOG1052|consen 383 LNCLWLTVGSLLQQG-SDEIPRSLSTRLLLGAWWLFVLILISSYTANLTAFLTV 435 (656)
T ss_pred ccchhhhhHHHhccC-CCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 346777777777777 56999999999999999999999999999999998865
No 188
>PHA01757 hypothetical protein
Probab=66.09 E-value=28 Score=26.23 Aligned_cols=48 Identities=17% Similarity=0.346 Sum_probs=37.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHH
Q 006072 130 NLREMVFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLMK 177 (662)
Q Consensus 130 ~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 177 (662)
+..|-.+-=|+..+|++.-+|++|.+..+..+..+.+.|.+-++++..
T Consensus 4 ~l~e~al~gf~a~~g~l~~~fii~e~~hlynek~~nenf~~AvD~m~k 51 (98)
T PHA01757 4 TLLEGALYGFFAVTGALSASFIIGEIVHLYNEKQRNENFAKAIDQMSK 51 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhHhHHHHHHHHHH
Confidence 345666666888899999999999999988777777788887776654
No 189
>KOG1054 consensus Glutamate-gated AMPA-type ion channel receptor subunit GluR2 and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=61.44 E-value=15 Score=39.14 Aligned_cols=52 Identities=17% Similarity=0.282 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006072 107 YITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALI 159 (662)
Q Consensus 107 Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~ 159 (662)
-..|+||++....--| -||.|.+..+++...++-++-+++.+-..++++.++
T Consensus 596 ifNsLWFsLgAFMQQG-~DI~PRslSGRIvggvWWFFTlIIiSSYTANLAAFL 647 (897)
T KOG1054|consen 596 IFNSLWFSLGAFMQQG-CDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFL 647 (897)
T ss_pred hhHHHHHHHHHHHhcC-CCCCccccccceeccchhhhhhhhhhhhhhHHHHHH
Confidence 4579999999998888 799999999999999888888888777777777776
No 190
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=60.77 E-value=2.3e+02 Score=30.12 Aligned_cols=58 Identities=14% Similarity=0.260 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhhhccHhHHHhhchHHHHHHHHHHHH-----HHHhcccccccCCCHHHHHHHHHhccceeccC
Q 006072 189 RDQIIGHLRLQYESSYTEASVLQDIPISIRAKISQTLY-----LPYIEKVPLFKGCSSEFINQIVIRLHEEFFLP 258 (662)
Q Consensus 189 ~~~i~~~~~~~~~~~~~~~~~l~~Lp~~L~~~i~~~~~-----~~~l~~~~~f~~~~~~~~~~l~~~~~~~~~~~ 258 (662)
-+-|+.|++|+ .+|..|+.++....- .+........+.+|+....+|+..++....++
T Consensus 249 mDGiK~YM~~R------------kV~~~lq~rVikwfdYlwa~~~~~DEeevl~~LP~kL~aeIA~nvh~dTLkk 311 (536)
T KOG0500|consen 249 MDGIKQYMRYR------------KVPKALQTRVIKWFDYLWAHKKIVDEEEVLKLLPDKLKAEIAINVHLDTLKK 311 (536)
T ss_pred HHHHHHHHHHh------------cccHHHHHHHHHHHHHHHhccccccHHHHHHhCCHHHHhHhHHHHHHHHHHh
Confidence 34567777755 677777777654332 22333445556678888888888876665533
No 191
>PLN03218 maturation of RBCL 1; Provisional
Probab=60.57 E-value=96 Score=37.27 Aligned_cols=169 Identities=10% Similarity=0.000 Sum_probs=73.1
Q ss_pred hHhHHhccCCHHHHHHHHH----cCCCCCCCCCCCCcHHHHHHHcCcHHHHHH----HHhcCCCCcccCCCCCcHHHHHH
Q 006072 383 KVNSAAYHGDLYQLEGLIR----AGADPNRTDYDGRSPLHLAASRGYEEIMTF----LIQKGVDINLKDNFGNTPLLEAI 454 (662)
Q Consensus 383 ~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~----Ll~~g~~~~~~~~~g~t~L~~A~ 454 (662)
-+...+..|+++.+..+.+ .|..++.. .-.+.+...++.|+.+-+.. +.+.|..++.... .+-+...+
T Consensus 585 LI~ay~k~G~ldeA~elf~~M~e~gi~p~~~--tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~Ty--nsLI~a~~ 660 (1060)
T PLN03218 585 LMKACANAGQVDRAKEVYQMIHEYNIKGTPE--VYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEVFF--SALVDVAG 660 (1060)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHcCCCCChH--HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHHHH--HHHHHHHH
Confidence 3444556666654444443 33332211 11233444455666543333 3334554442211 12333344
Q ss_pred HhCCHH----HHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCcHHHH-HHHhCcHH-
Q 006072 455 KYGNDG----AASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVL----SNGIDPNTRDYDLRTPLHV-AASEGLYL- 524 (662)
Q Consensus 455 ~~~~~~----~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~-A~~~~~~~- 524 (662)
..|+.+ +.+.+.+.|..++.....+.+...++.|..+-...+. +.|..++... ++.|.. .+..|..+
T Consensus 661 k~G~~eeA~~l~~eM~k~G~~pd~~tynsLI~ay~k~G~~eeA~~lf~eM~~~g~~Pdvvt---yN~LI~gy~k~G~~ee 737 (1060)
T PLN03218 661 HAGDLDKAFEILQDARKQGIKLGTVSYSSLMGACSNAKNWKKALELYEDIKSIKLRPTVST---MNALITALCEGNQLPK 737 (1060)
T ss_pred hCCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHHH---HHHHHHHHHHCCCHHH
Confidence 455544 3334445566555555555566666666655333333 3444443321 233333 33445443
Q ss_pred ---HHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHH
Q 006072 525 ---MAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIK 560 (662)
Q Consensus 525 ---~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~ 560 (662)
+++.+.+.|..+|.... .+-+...+..|..+.+.
T Consensus 738 Alelf~eM~~~Gi~Pd~~Ty--~sLL~a~~k~G~le~A~ 774 (1060)
T PLN03218 738 ALEVLSEMKRLGLCPNTITY--SILLVASERKDDADVGL 774 (1060)
T ss_pred HHHHHHHHHHcCCCCCHHHH--HHHHHHHHHCCCHHHHH
Confidence 33333445555543321 12334444455544433
No 192
>KOG3599 consensus Ca2+-modulated nonselective cation channel polycystin [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=60.01 E-value=2.5e+02 Score=32.52 Aligned_cols=23 Identities=17% Similarity=0.447 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHH
Q 006072 18 YLLWIRLYRVRKVSQFFHKMEKD 40 (662)
Q Consensus 18 ~lrl~rllRl~~~~~~~~~~~~~ 40 (662)
++-.+|++|++++.+-+..+...
T Consensus 562 fl~tiK~~k~l~f~~t~~~~s~T 584 (798)
T KOG3599|consen 562 FLTTIKLWKVLRFNKTMSQFSST 584 (798)
T ss_pred HHHHHHHHHhcchhHHHHHHHHH
Confidence 44456666666666655555443
No 193
>PLN03218 maturation of RBCL 1; Provisional
Probab=58.65 E-value=86 Score=37.68 Aligned_cols=10 Identities=20% Similarity=0.305 Sum_probs=4.4
Q ss_pred hHHhccCCHH
Q 006072 385 NSAAYHGDLY 394 (662)
Q Consensus 385 ~~A~~~g~~~ 394 (662)
...++.|+++
T Consensus 480 ~~y~k~G~vd 489 (1060)
T PLN03218 480 STCAKSGKVD 489 (1060)
T ss_pred HHHHhCcCHH
Confidence 3334445444
No 194
>smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
Probab=57.56 E-value=24 Score=31.04 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=36.8
Q ss_pred ccceeccCCCeEEecCC-ccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCcccc
Q 006072 251 LHEEFFLPGEVIMEKGN-VVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFG 304 (662)
Q Consensus 251 ~~~~~~~~ge~I~~~g~-~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fG 304 (662)
+....+.||...-..-- ..+++++|++|...+......+++.....+++||.|=
T Consensus 32 ~~~~~i~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~~~~~~~~~l~~GD~~~ 86 (146)
T smart00835 32 AARVNLEPGGMLPPHYHPRATELLYVVRGEGRVGVVDPNGNKVYDARLREGDVFV 86 (146)
T ss_pred EEEEEecCCcCcCCeeCCCCCEEEEEEeCeEEEEEEeCCCCeEEEEEecCCCEEE
Confidence 44456777776544432 2568999999999887644444555667789999764
No 195
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=57.52 E-value=66 Score=29.48 Aligned_cols=54 Identities=19% Similarity=0.437 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHhh----hccHhHHHhhc--hHHHHHHHHHHH
Q 006072 170 DKMTDLMKYINRNRLGRDIRDQIIGHLRLQYES----SYTEASVLQDI--PISIRAKISQTL 225 (662)
Q Consensus 170 ~~~~~~~~~m~~~~l~~~l~~~i~~~~~~~~~~----~~~~~~~l~~L--p~~L~~~i~~~~ 225 (662)
+=+++++++++ ++|++-++++.+||+-++.+ +.+|+++.++| |.++-+++..+.
T Consensus 5 efL~~L~~~L~--~lp~~e~~e~l~~Y~e~f~d~~~~G~sEeeii~~LG~P~~iA~~i~~~~ 64 (181)
T PF08006_consen 5 EFLNELEKYLK--KLPEEEREEILEYYEEYFDDAGEEGKSEEEIIAELGSPKEIAREILAEY 64 (181)
T ss_pred HHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHhhhCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 44567778886 59999999999999987754 36789999998 777777766544
No 196
>PF13314 DUF4083: Domain of unknown function (DUF4083)
Probab=57.51 E-value=67 Score=22.85 Aligned_cols=15 Identities=7% Similarity=0.481 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHhh
Q 006072 167 KFRDKMTDLMKYINR 181 (662)
Q Consensus 167 ~~~~~~~~~~~~m~~ 181 (662)
..++|++.+-+.+.+
T Consensus 43 ~~eqKLDrIIeLLEK 57 (58)
T PF13314_consen 43 SMEQKLDRIIELLEK 57 (58)
T ss_pred HHHHHHHHHHHHHcc
Confidence 577888888776543
No 197
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=57.50 E-value=29 Score=26.74 Aligned_cols=49 Identities=22% Similarity=0.350 Sum_probs=37.2
Q ss_pred cCCcHHHHHHHHHhHcCCCC---Ccc-cccCCCceeee---eeeeecCCeEEEeec
Q 006072 612 IPQNIKDLIKTAAEQLDFRG---GDC-ILSSEGGKILD---VDMINDDQKLYLIQE 660 (662)
Q Consensus 612 l~~~~~el~~~~~~~~~~~~---~~~-~~~~~~~~~~~---~~~~r~~~~~~~~~~ 660 (662)
.-.+++|++..+.+++.... +.. ++.+||.+++| +...-|+..+++.++
T Consensus 19 ~A~sL~eL~~K~~~~l~l~~~~~~~~lvL~eDGT~VddEeyF~tLp~nT~l~~L~~ 74 (80)
T cd06536 19 AASSLEELRIKACESLGFDSSSAPITLVLAEDGTIVEDEDYFLCLPPNTKFVLLAE 74 (80)
T ss_pred EcCCHHHHHHHHHHHhCCCCCCCceEEEEecCCcEEccHHHHhhCCCCcEEEEECC
Confidence 45789999999999998862 233 36788999976 777788887777654
No 198
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=57.01 E-value=2.7e+02 Score=31.91 Aligned_cols=170 Identities=13% Similarity=0.038 Sum_probs=91.3
Q ss_pred hhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHH-HHHHHcCcHHHHH----HHHhcCCCCcccCCCCCcHHHHHHHh
Q 006072 382 LKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPL-HLAASRGYEEIMT----FLIQKGVDINLKDNFGNTPLLEAIKY 456 (662)
Q Consensus 382 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L-~~A~~~~~~~~v~----~Ll~~g~~~~~~~~~g~t~L~~A~~~ 456 (662)
+-+..-++.|+++....+.+.-... |..-++.| ..-+..|+.+-+. .+.+.|..+|.... .+.+...+..
T Consensus 264 ~Li~~y~k~g~~~~A~~vf~~m~~~---~~vt~n~li~~y~~~g~~~eA~~lf~~M~~~g~~pd~~t~--~~ll~a~~~~ 338 (697)
T PLN03081 264 ALIDMYSKCGDIEDARCVFDGMPEK---TTVAWNSMLAGYALHGYSEEALCLYYEMRDSGVSIDQFTF--SIMIRIFSRL 338 (697)
T ss_pred HHHHHHHHCCCHHHHHHHHHhCCCC---ChhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHHHH--HHHHHHHHhc
Confidence 3455566677777777776643322 22233333 3445566654333 33345655553321 1233444455
Q ss_pred CCHH----HHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH-HhCcH----HHHH
Q 006072 457 GNDG----AASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAA-SEGLY----LMAK 527 (662)
Q Consensus 457 ~~~~----~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~----~~v~ 527 (662)
|..+ +.+.+++.|..++.....+.+..-++.|+.+-...+.+.-... |..-++.|..+. ..|+. ++.+
T Consensus 339 g~~~~a~~i~~~m~~~g~~~d~~~~~~Li~~y~k~G~~~~A~~vf~~m~~~---d~~t~n~lI~~y~~~G~~~~A~~lf~ 415 (697)
T PLN03081 339 ALLEHAKQAHAGLIRTGFPLDIVANTALVDLYSKWGRMEDARNVFDRMPRK---NLISWNALIAGYGNHGRGTKAVEMFE 415 (697)
T ss_pred cchHHHHHHHHHHHHhCCCCCeeehHHHHHHHHHCCCHHHHHHHHHhCCCC---CeeeHHHHHHHHHHcCCHHHHHHHHH
Confidence 5544 3445556777777766777788888888888777777654333 333455555443 45654 3445
Q ss_pred HHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHH
Q 006072 528 LLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKL 561 (662)
Q Consensus 528 ~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~ 561 (662)
-+.+.|..+|.... .+.+...+..|..+-..-
T Consensus 416 ~M~~~g~~Pd~~T~--~~ll~a~~~~g~~~~a~~ 447 (697)
T PLN03081 416 RMIAEGVAPNHVTF--LAVLSACRYSGLSEQGWE 447 (697)
T ss_pred HHHHhCCCCCHHHH--HHHHHHHhcCCcHHHHHH
Confidence 55566777664431 123444455566554433
No 199
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=56.02 E-value=30 Score=26.43 Aligned_cols=49 Identities=20% Similarity=0.469 Sum_probs=37.4
Q ss_pred cCCcHHHHHHHHHhHcCCCC-Cccc-ccCCCceeee--eeeeecCCeEEEeec
Q 006072 612 IPQNIKDLIKTAAEQLDFRG-GDCI-LSSEGGKILD--VDMINDDQKLYLIQE 660 (662)
Q Consensus 612 l~~~~~el~~~~~~~~~~~~-~~~~-~~~~~~~~~~--~~~~r~~~~~~~~~~ 660 (662)
...+++|++..+.++|..+. +..+ +.+||.++++ +...-|+..+.++++
T Consensus 19 ~A~sL~eL~~K~~~~l~l~~~~~~l~L~eDGTeVtEeyF~tLp~nT~lmvL~~ 71 (77)
T cd06535 19 AAKNLKELLRKGCRLLQLPCAGSRLCLYEDGTEVTEEYFPTLPDNTELVLLTP 71 (77)
T ss_pred EcCCHHHHHHHHHHHhCCCCCCcEEEEecCCcEehHHHHhcCCCCcEEEEEcC
Confidence 35789999999999998753 2334 7788988866 777888887777654
No 200
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=55.67 E-value=11 Score=28.93 Aligned_cols=48 Identities=19% Similarity=0.447 Sum_probs=35.9
Q ss_pred CCcHHHHHHHHHhHcCCC-CCc-ccccCCCceeee---eeeeecCCeEEEeec
Q 006072 613 PQNIKDLIKTAAEQLDFR-GGD-CILSSEGGKILD---VDMINDDQKLYLIQE 660 (662)
Q Consensus 613 ~~~~~el~~~~~~~~~~~-~~~-~~~~~~~~~~~~---~~~~r~~~~~~~~~~ 660 (662)
-.+++||+..+.+++... .+. -++.+||..++| +...-|+..+.+...
T Consensus 20 A~sL~eL~~K~~~~l~~~~~~~~lvL~eDGT~VddEeyF~tLp~nT~lm~L~~ 72 (78)
T PF02017_consen 20 ASSLEELLEKACDKLQLPEEPVRLVLEEDGTEVDDEEYFQTLPDNTVLMLLEK 72 (78)
T ss_dssp ESSHHHHHHHHHHHHT-SSSTCEEEETTTTCBESSCHHHCCSSSSEEEEEEES
T ss_pred cCCHHHHHHHHHHHhCCCCcCcEEEEeCCCcEEccHHHHhhCCCCCEEEEECC
Confidence 489999999999999986 223 346678998885 777778877777654
No 201
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=54.33 E-value=2.5e+02 Score=32.12 Aligned_cols=15 Identities=7% Similarity=0.100 Sum_probs=8.2
Q ss_pred HHHHHHHhhcCCCHH
Q 006072 173 TDLMKYINRNRLGRD 187 (662)
Q Consensus 173 ~~~~~~m~~~~l~~~ 187 (662)
..+...|.+.++.++
T Consensus 143 ~~l~~~m~~~g~~~~ 157 (697)
T PLN03081 143 KAVYWHVESSGFEPD 157 (697)
T ss_pred HHHHHHHHHhCCCcc
Confidence 345556666665544
No 202
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]
Probab=53.90 E-value=60 Score=34.28 Aligned_cols=47 Identities=11% Similarity=0.097 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 006072 15 AVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCS 61 (662)
Q Consensus 15 ~~~~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 61 (662)
+...+|++|++|++|+.++-......-.+-.++.+-.+=+.++++++
T Consensus 306 ~~~vvrvlR~lRI~RI~KLaRhS~GLr~lg~Tlr~S~~ElglLllfL 352 (477)
T KOG3713|consen 306 AGLVVRVLRVLRILRIFKLARHSTGLRTLGLTLRRSYRELGLLLLFL 352 (477)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34777888888888888777666666556566666666666555553
No 203
>KOG3300 consensus NADH:ubiquinone oxidoreductase, B16.6 subunit/cell death-regulatory protein [Energy production and conversion; Cell cycle control, cell division, chromosome partitioning]
Probab=52.24 E-value=47 Score=27.95 Aligned_cols=42 Identities=17% Similarity=0.253 Sum_probs=21.6
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHhhh-ccHhHHHhhchH
Q 006072 174 DLMKYINRNRLGRDIRDQIIGHLRLQYESS-YTEASVLQDIPI 215 (662)
Q Consensus 174 ~~~~~m~~~~l~~~l~~~i~~~~~~~~~~~-~~~~~~l~~Lp~ 215 (662)
.+..|--++-+-+-||..--+++-..+.++ ..|.+++++.|.
T Consensus 64 kiEd~~a~nai~PiL~AErDr~~l~~lrkn~eeEaeiMKdVPg 106 (146)
T KOG3300|consen 64 KIEDYAARNAILPILQAERDRRFLSELRKNLEEEAEIMKDVPG 106 (146)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHccCCC
Confidence 334443444444555554444444444444 456677777764
No 204
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=51.73 E-value=42 Score=25.78 Aligned_cols=49 Identities=12% Similarity=0.309 Sum_probs=37.3
Q ss_pred cCCcHHHHHHHHHhHcCCCCCc-ccccCCCceeee---eeeeecCCeEEEeec
Q 006072 612 IPQNIKDLIKTAAEQLDFRGGD-CILSSEGGKILD---VDMINDDQKLYLIQE 660 (662)
Q Consensus 612 l~~~~~el~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~r~~~~~~~~~~ 660 (662)
.-.+++||+..+.++|..+.+. -++.+||.+++| +...-|+..+.++..
T Consensus 19 ~A~sL~eL~~K~~~~l~l~~~~~lvL~eDGT~Vd~EeyF~tLp~nt~l~vL~~ 71 (79)
T cd06538 19 MADSLEDLLNKVLDALLLDCISSLVLDEDGTGVDTEEFFQALADNTVFMVLGK 71 (79)
T ss_pred EcCCHHHHHHHHHHHcCCCCccEEEEecCCcEEccHHHHhhCCCCcEEEEECC
Confidence 4578999999999999985433 346678888866 777788887777654
No 205
>PRK09108 type III secretion system protein HrcU; Validated
Probab=49.47 E-value=2.2e+02 Score=29.34 Aligned_cols=63 Identities=6% Similarity=0.092 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q 006072 132 REMVFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 194 (662)
Q Consensus 132 ~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~ 194 (662)
...++..+..++..+..++++-.+..+..+ -...++.+=..+++++-+++..=+++++.|+|+
T Consensus 178 ~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMSkqEvK~E~K~~EGdP~iK~rrRq 241 (353)
T PRK09108 178 AQILWTVLMKLLAVAAGVFLLVGAADWKIQRWLFIRDNRMSKDEVKREHKESEGDPHIKGERKR 241 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 334455555556666666666556665543 222222222335666666777777777776655
No 206
>KOG2378 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=48.94 E-value=17 Score=37.54 Aligned_cols=44 Identities=27% Similarity=0.569 Sum_probs=38.6
Q ss_pred CCccccchhhhccCCccceEEEccc-eeEEEecHHHHHHHHHHhh
Q 006072 299 PNSSFGEVSILCNIPQPYTVQVCEL-CRLLRIDKQSFTNIIDIYF 342 (662)
Q Consensus 299 ~G~~fGe~~~l~~~~~~~~~~a~~~-~~l~~l~~~~~~~~l~~~~ 342 (662)
+||-||..++....|+.+++...++ |-+.++++.+|+.+++.-.
T Consensus 1 eGddfgklalvnd~praativl~ed~~~fl~vDk~~Fn~I~~~vE 45 (573)
T KOG2378|consen 1 EGDDFGKLALVNDAPRAATIVLREDNCHFLRVDKHDFNRILHDVE 45 (573)
T ss_pred CCcccchhccccccccccceeeecCCCcceeecHHHHHHHHHhhh
Confidence 4889999999999999988887765 9999999999999998653
No 207
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=46.06 E-value=17 Score=33.85 Aligned_cols=42 Identities=24% Similarity=0.042 Sum_probs=30.8
Q ss_pred HHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhcccccc
Q 006072 529 LVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQL 570 (662)
Q Consensus 529 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~ 570 (662)
|+++||-.|..|....||=++|.+.|+.+..+.|++.|+...
T Consensus 1 lle~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~Se 42 (271)
T KOG1709|consen 1 LLEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVPSE 42 (271)
T ss_pred CcccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCchh
Confidence 356777777777777777777777777777777777776543
No 208
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown. They contain the conserved barrel domain of the 'cupin' superfamily and members are specific to plants and bacteria.; PDB: 1RC6_A 3MYX_A 1O5U_A 2K9Z_A 1LKN_A 3ES4_A 1SFN_B 3BCW_A.
Probab=45.70 E-value=30 Score=26.24 Aligned_cols=29 Identities=21% Similarity=0.527 Sum_probs=22.1
Q ss_pred CeEEEEEeCEEEEEeeecCCcccEEEEeCCCccc
Q 006072 270 DQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSF 303 (662)
Q Consensus 270 ~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~f 303 (662)
+++.+|++|.+.+.. ++|.. ..+++||.|
T Consensus 26 ~E~~~vleG~v~it~--~~G~~---~~~~aGD~~ 54 (74)
T PF05899_consen 26 DEFFYVLEGEVTITD--EDGET---VTFKAGDAF 54 (74)
T ss_dssp EEEEEEEEEEEEEEE--TTTEE---EEEETTEEE
T ss_pred CEEEEEEEeEEEEEE--CCCCE---EEEcCCcEE
Confidence 789999999998864 35544 457888876
No 209
>PRK08156 type III secretion system protein SpaS; Validated
Probab=45.68 E-value=2.8e+02 Score=28.63 Aligned_cols=60 Identities=8% Similarity=0.012 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q 006072 135 VFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 194 (662)
Q Consensus 135 ~~~i~~~~~g~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~ 194 (662)
+...+..++..+..++++-.+..+..+ -...++.+=..+++++-.++..=++.++.|+|+
T Consensus 174 ~~~~~~~l~~~~~~~~lvia~~D~~~Qr~~~~k~lkMSkqEvKdE~Ke~EGdP~iK~r~R~ 234 (361)
T PRK08156 174 WRELLVKLVLTFLACALIVLILDFIAEYFLHMKDMKMDKQEVKREYKEQEGNPEIKSKRRE 234 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 333344444444444444445554433 221222222335566666667777777776655
No 210
>TIGR00933 2a38 potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system.
Probab=44.62 E-value=70 Score=33.57 Aligned_cols=43 Identities=14% Similarity=0.267 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHhhcccCCC--cccCChhhHHHHHHHHHHHHHH
Q 006072 105 KSYITSMYASVVTMTTVGYGD--VHAVNLREMVFIMIYVSFDMIL 147 (662)
Q Consensus 105 ~~Y~~s~yw~~~t~ttvGygd--i~p~~~~e~~~~i~~~~~g~~~ 147 (662)
.....+.+.++++++|.||.. +..-++.-+++.++.|++|.+-
T Consensus 230 ~~~~~~~f~~~s~~~T~Gfst~d~~~~~~~~~lll~~lMfIGg~~ 274 (390)
T TIGR00933 230 GALLLSAFFQSSTLRTAGFSTIDFAALPTATLVLLLLLMFIGGCS 274 (390)
T ss_pred HHHHHHHHHHHhhccCCCccccChhhcCHHHHHHHHHHHHHcCCC
Confidence 346678899999999999864 4444566778888899998655
No 211
>PRK12721 secretion system apparatus protein SsaU; Reviewed
Probab=44.53 E-value=2.9e+02 Score=28.43 Aligned_cols=62 Identities=11% Similarity=0.161 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q 006072 133 EMVFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 194 (662)
Q Consensus 133 e~~~~i~~~~~g~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~ 194 (662)
..+...++.+++.+..++++-.+..+..+ -...++.+=..+++++-+++..=+++++.|+|+
T Consensus 177 ~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMskqEvKdE~Ke~EGdP~iK~rrR~ 239 (349)
T PRK12721 177 PVVSTLIFWLWGGLLACYLVFGILDYSFQRYKIMKQLKMSKDDVKQEYKDSEGDPEIKQKRRE 239 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 33444445555555555555445555433 222222222335666666777777777777655
No 212
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]
Probab=44.28 E-value=35 Score=34.28 Aligned_cols=49 Identities=8% Similarity=0.113 Sum_probs=36.8
Q ss_pred cchhhHHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 006072 12 RKEAVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYC 60 (662)
Q Consensus 12 ~~~~~~~lrl~rllRl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 60 (662)
..+++|+.|.+|++++.|=++=++.+-+.++.+..-.-++.+++.+-++
T Consensus 325 ILRViRLVRVFRIFKLSRHSkGLQILGqTl~aSmrElgLLIFFlfIgvi 373 (507)
T KOG1545|consen 325 ILRVIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVI 373 (507)
T ss_pred HHHHHHHHHHhhheeeccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888888888888888777777777777777766666666666555
No 213
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=43.60 E-value=89 Score=32.53 Aligned_cols=58 Identities=16% Similarity=0.275 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 104 WKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 104 ~~~Y~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
.-.|+.+|-|++..+.+++-++.......--.+++++.+++++.|.|.|..++..++-
T Consensus 98 Lg~Figtfvy~l~~l~~i~~~~~~~~p~~~~~~a~~l~i~~v~~li~fI~~i~~~iqv 155 (371)
T PF10011_consen 98 LGTFIGTFVYSLLVLIAIRSGDYGSVPRLSVFIALALAILSVVLLIYFIHHIARSIQV 155 (371)
T ss_pred HHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 3458999999999998887555422222235667778888888888888888777743
No 214
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=43.32 E-value=6.2 Score=42.32 Aligned_cols=116 Identities=18% Similarity=0.037 Sum_probs=68.5
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCc--ccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCc
Q 006072 445 FGNTPLLEAIKYGNDGAASLLVKEGASLN--VEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGL 522 (662)
Q Consensus 445 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 522 (662)
.+.+.+|++...+ ....|++.+.+++ ..+..++++..+.....+.+..++..+..-+..+..|.|+||.+...++
T Consensus 105 ~~a~~~~~~~~~~---~~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~ 181 (503)
T KOG0513|consen 105 FGATDILWKFNLE---KAPKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKEN 181 (503)
T ss_pred ccccchhhhhhhc---CCCccccccccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCC
Confidence 4455555554332 2233444444444 2334567788788888888877777666666677789999999988877
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhcccccccc
Q 006072 523 YLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLE 572 (662)
Q Consensus 523 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~ 572 (662)
. ++.+. ..|-++.+|+++....+..+-+-.++++++.....
T Consensus 182 ~--~~~i~-------~ldl~~~~P~lf~~~~~~~~~~v~~~~~~~~~~c~ 222 (503)
T KOG0513|consen 182 L--LVVIP-------CLDLKSLTPNLFSIYDALGTKIVPLLDFKAIDICI 222 (503)
T ss_pred c--ceEEE-------eeccCcCCceeeeeeccccccchhhhhhhhhhhhh
Confidence 6 22222 22333477887777666555333344444444333
No 215
>PF14377 DUF4414: Domain of unknown function (DUF4414)
Probab=43.26 E-value=41 Score=27.80 Aligned_cols=42 Identities=24% Similarity=0.406 Sum_probs=32.0
Q ss_pred CCCHHHHHHHHHHHHHHHhhh------------ccHhHHHhhchHHHHHHHHHH
Q 006072 183 RLGRDIRDQIIGHLRLQYESS------------YTEASVLQDIPISIRAKISQT 224 (662)
Q Consensus 183 ~l~~~l~~~i~~~~~~~~~~~------------~~~~~~l~~Lp~~L~~~i~~~ 224 (662)
-+|.+++..|...+....... .+...++..||+.||.+|...
T Consensus 52 ALP~diR~EVl~qe~~~~~~~~~~~~~~~~~~~~d~asflatl~p~LR~evL~~ 105 (108)
T PF14377_consen 52 ALPPDIREEVLAQERRERRRQERQQNARQHPQEMDNASFLATLPPELRREVLLD 105 (108)
T ss_pred hCCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCHHHHHHhCCHHHHHHHhhc
Confidence 489999999998887654221 235579999999999998653
No 216
>PRK05702 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=42.56 E-value=3.3e+02 Score=28.18 Aligned_cols=63 Identities=6% Similarity=0.038 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q 006072 132 REMVFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 194 (662)
Q Consensus 132 ~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~ 194 (662)
...+...+..++..+..++++-.+..+..+ -...++.+=..+++++-.++..=++.++.|+|+
T Consensus 183 ~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMskqEVKdE~Ke~EGdP~iK~rrR~ 246 (359)
T PRK05702 183 LGHALDLVLKLLLLVVLALLVIAAIDVPFQRWQYLKKLKMTKQEVKDEHKQSEGDPEVKGRIRQ 246 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 333444444555555555544445555433 111112222234555666666667777666654
No 217
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=42.42 E-value=1.3 Score=47.22 Aligned_cols=99 Identities=16% Similarity=0.036 Sum_probs=59.3
Q ss_pred CCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcc--cccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcH
Q 006072 436 GVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNV--EEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTP 513 (662)
Q Consensus 436 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 513 (662)
..++|.......++++..+.....+++..++..+..-.. ..|.++||.+...++. +..+ ...|-++.+|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~--~~~i-------~~ldl~~~~P 196 (503)
T KOG0513|consen 126 FDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENL--LVVI-------PCLDLKSLTP 196 (503)
T ss_pred cccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCc--ceEE-------EeeccCcCCc
Confidence 333443345566788888888888887777764433222 3578888888888776 2222 2233344788
Q ss_pred HHHHHHhCcHHHHHHHHHCCCCCCCCCCCC
Q 006072 514 LHVAASEGLYLMAKLLVEAGASVFPKDRWG 543 (662)
Q Consensus 514 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 543 (662)
+++....+..+.+--++++++..+..+..|
T Consensus 197 ~lf~~~~~~~~~~v~~~~~~~~~~c~~t~~ 226 (503)
T KOG0513|consen 197 NLFSIYDALGTKIVPLLDFKAIDICIDTYG 226 (503)
T ss_pred eeeeeeccccccchhhhhhhhhhhhhcccc
Confidence 887776655543334455666655555544
No 218
>TIGR00328 flhB flagellar biosynthetic protein FlhB. FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella.
Probab=42.03 E-value=3.5e+02 Score=27.86 Aligned_cols=62 Identities=5% Similarity=0.040 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q 006072 133 EMVFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 194 (662)
Q Consensus 133 e~~~~i~~~~~g~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~ 194 (662)
..+...+..++..+..++++-.+..+..+ -...++.+=..+++++-+++..=+++++.|+|+
T Consensus 177 ~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lrMskqEVKdE~K~~EGdP~iK~rrR~ 239 (347)
T TIGR00328 177 TNFLDIAKSLLILVLLLLLVIAVFDYFFQRWQYIKSLKMTKQEVKDELKQSEGDPEVKGRIRQ 239 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 33444444445554444444444554433 121222222335666666777777777776654
No 219
>COG1422 Predicted membrane protein [Function unknown]
Probab=41.39 E-value=1e+02 Score=28.46 Aligned_cols=37 Identities=14% Similarity=0.302 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhcC
Q 006072 147 LGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYINRNR 183 (662)
Q Consensus 147 ~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~m~~~~ 183 (662)
+.+..+..+...+....+-+++|+.+++.++.+++-+
T Consensus 56 i~gl~~~i~~~~liD~ekm~~~qk~m~efq~e~~eA~ 92 (201)
T COG1422 56 ITGLYITILQKLLIDQEKMKELQKMMKEFQKEFREAQ 92 (201)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444344566778888888887776443
No 220
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=41.35 E-value=3.4e+02 Score=28.05 Aligned_cols=60 Identities=5% Similarity=-0.006 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q 006072 135 VFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 194 (662)
Q Consensus 135 ~~~i~~~~~g~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~ 194 (662)
+...+..+++.++.++++-.+..+..+ -...++.+=..+++++-+++..=++.++.|+|+
T Consensus 188 ~~~~~~~l~~~~~~~~~via~~D~~~q~~~~~k~lkMSkqEVKdE~Ke~EGdP~iK~r~Rq 248 (358)
T PRK13109 188 ILTVAIRLVSAVAIATIVLVALDLVWARFHWRRSLRMTKQEIKDEHKQAEGDPSVKARLRS 248 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 344444444555545555455555433 222222222335666666777777777776655
No 221
>TIGR01404 FlhB_rel_III type III secretion protein, YscU/HrpY family. This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs.
Probab=38.83 E-value=4e+02 Score=27.31 Aligned_cols=61 Identities=8% Similarity=0.085 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Q 006072 135 VFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGH 195 (662)
Q Consensus 135 ~~~i~~~~~g~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~~ 195 (662)
++..+..++..+..++++-.+..+..+ -...++.+=..+++++-+++..=+++++.|+|+-
T Consensus 178 ~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMskqEvKdE~Ke~EGdP~iK~r~R~~ 239 (342)
T TIGR01404 178 VGELLKLLILVCLGFFLVVGLADFAFQRYLFMKDLKMSKDEVKREYKEQEGDPEIKSKRREL 239 (342)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHHHH
Confidence 334444444444444444444444432 1112222223356666667777777777776553
No 222
>COG4792 EscU Type III secretory pathway, component EscU [Intracellular trafficking and secretion]
Probab=38.83 E-value=4e+02 Score=26.42 Aligned_cols=15 Identities=13% Similarity=0.164 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHH
Q 006072 145 MILGAYLIGNMTALI 159 (662)
Q Consensus 145 ~~~~~~~i~~i~~~~ 159 (662)
.+.++|++..+..+.
T Consensus 190 g~~~~ylv~sv~Dy~ 204 (349)
T COG4792 190 GVAVGYLVFSVADYA 204 (349)
T ss_pred HHHHHHHHHHHHHHH
Confidence 345556555555543
No 223
>TIGR00933 2a38 potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system.
Probab=38.71 E-value=2.8e+02 Score=29.10 Aligned_cols=47 Identities=6% Similarity=0.094 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhhcccCCCccc------CChhhHHHHHHHHHHHHHHHHHHH
Q 006072 106 SYITSMYASVVTMTTVGYGDVHA------VNLREMVFIMIYVSFDMILGAYLI 152 (662)
Q Consensus 106 ~Y~~s~yw~~~t~ttvGygdi~p------~~~~e~~~~i~~~~~g~~~~~~~i 152 (662)
...+|++-++++++|-|+.-... .+..-.++.+++|++|.+-|....
T Consensus 128 ~~~~Aif~avSa~~taGFs~~~~~~~~~~~~~~i~~v~~~lm~iGg~gF~v~~ 180 (390)
T TIGR00933 128 PLFDAIFHSISAFNNGGFSTHSDSSIGYFHDPSVNLVIAFLIILGGLGFTVHY 180 (390)
T ss_pred HHHHHHHHHHHHHhcCCcCCCCCcchhhccChHHHHHHHHHHHHHhcCHHHHH
Confidence 46779999999999999765433 122244566777888877665554
No 224
>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=37.24 E-value=1.8e+02 Score=36.45 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=18.8
Q ss_pred hcccCCCcccCChhhHHHHHHHHHHHHHHH
Q 006072 119 TTVGYGDVHAVNLREMVFIMIYVSFDMILG 148 (662)
Q Consensus 119 ttvGygdi~p~~~~e~~~~i~~~~~g~~~~ 148 (662)
+.++-|...+.+....+|.+++.++|.++.
T Consensus 1063 ~~~~~~p~~~~~~~~~~ffvifii~~~ff~ 1092 (1592)
T KOG2301|consen 1063 RGVNAQPILESNLYMYLFFVIFIIIGSFFT 1092 (1592)
T ss_pred hccCcCCcccccccceeehhhhhhHHhhhh
Confidence 444545556666677777777777666554
No 225
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=36.96 E-value=2.8e+02 Score=33.53 Aligned_cols=62 Identities=11% Similarity=0.108 Sum_probs=36.0
Q ss_pred cCChhhHHHHHH-----HHHHHHHHHHHHHHHHHHHHHc-CcccHH--HHHHHHHHHHHHhhcCCCHHHH
Q 006072 128 AVNLREMVFIMI-----YVSFDMILGAYLIGNMTALIVK-GSKTEK--FRDKMTDLMKYINRNRLGRDIR 189 (662)
Q Consensus 128 p~~~~e~~~~i~-----~~~~g~~~~~~~i~~i~~~~~~-~~~~~~--~~~~~~~~~~~m~~~~l~~~l~ 189 (662)
|......+.+.+ +.+..+++.-.+|+.+..++.+ .....+ ..++...+.+|=.+.-+|+.+.
T Consensus 1006 ~~c~pg~wl~plLl~~yLLv~nILL~NLLIA~Fn~tf~~v~~~sd~iWkFQRY~limeyh~rP~LPPPfi 1075 (1381)
T KOG3614|consen 1006 PSCPPGSWLTPLLLVIYLLVTNILLVNLLIAMFSYTFGNVQENSDQIWKFQRYSLIMEYHSRPALPPPFI 1075 (1381)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCcH
Confidence 444445554443 3334455555666666666655 222222 2356778888888888888873
No 226
>PF08475 Baculo_VP91_N: Viral capsid protein 91 N-terminal; InterPro: IPR013682 This domain is found in Baculoviridae including the nucleopolyhedrovirus at the N terminus of the viral capsid protein 91 (VP91) [].
Probab=36.74 E-value=57 Score=29.67 Aligned_cols=27 Identities=19% Similarity=0.471 Sum_probs=21.6
Q ss_pred HHHHcCcccHHHHHHHHHHHHHHhhcC
Q 006072 157 ALIVKGSKTEKFRDKMTDLMKYINRNR 183 (662)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~m~~~~ 183 (662)
.++.....+..|.++++-+.+||++.+
T Consensus 17 ~~I~~dFde~~F~~rL~Vl~EYlkrtn 43 (183)
T PF08475_consen 17 LIIYNDFDENEFDNRLQVLTEYLKRTN 43 (183)
T ss_pred HhhccccchHHHHHHHHHHHHHHHhcC
Confidence 344556778899999999999999854
No 227
>TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase. Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase. This enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.
Probab=36.70 E-value=71 Score=28.45 Aligned_cols=62 Identities=13% Similarity=0.154 Sum_probs=37.7
Q ss_pred EecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEEccceeEEEecHH
Q 006072 263 MEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRIDKQ 332 (662)
Q Consensus 263 ~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a~~~~~l~~l~~~ 332 (662)
++..+ .+++|++++|.+.+-..+ +|..+. -.+++|++|=--. +.|.. .++.++|..+.+.+.
T Consensus 43 ~H~~~-tdE~FyqleG~~~l~v~d-~g~~~~-v~L~eGd~flvP~---gvpHs--P~r~~~t~~LvIE~~ 104 (159)
T TIGR03037 43 FHDDP-GEEFFYQLKGEMYLKVTE-EGKRED-VPIREGDIFLLPP---HVPHS--PQRPAGSIGLVIERK 104 (159)
T ss_pred cccCC-CceEEEEEcceEEEEEEc-CCcEEE-EEECCCCEEEeCC---CCCcc--cccCCCcEEEEEEeC
Confidence 45433 689999999998876433 343233 4589999763211 33332 234567777777654
No 228
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=35.77 E-value=1.5e+02 Score=26.68 Aligned_cols=56 Identities=11% Similarity=0.225 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHHc---CcccHHHHHHHHHHHHHHhhcCCCHHH
Q 006072 133 EMVFIMIYVSFDMILGAYLIGN-MTALIVK---GSKTEKFRDKMTDLMKYINRNRLGRDI 188 (662)
Q Consensus 133 e~~~~i~~~~~g~~~~~~~i~~-i~~~~~~---~~~~~~~~~~~~~~~~~m~~~~l~~~l 188 (662)
+-+++...+.+++...+|++|- ++..+.. .....++..|-.+..+-++++.+++.-
T Consensus 75 DP~~~~g~~t~a~g~lG~L~GP~~G~~vf~l~~r~~~~~~~~Ke~eF~~rIkknRvDps~ 134 (173)
T PF08566_consen 75 DPFMVYGLATLACGALGWLVGPSLGNQVFRLLNRKYLKQMDAKEKEFLARIKKNRVDPSS 134 (173)
T ss_pred CHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 5567777778888888887773 3444433 234456777777777777888887643
No 229
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=35.68 E-value=2.3e+02 Score=22.63 Aligned_cols=73 Identities=3% Similarity=0.130 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C---cccHHHHHHHHHHHHHHhhcC
Q 006072 108 ITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK-G---SKTEKFRDKMTDLMKYINRNR 183 (662)
Q Consensus 108 ~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~-~---~~~~~~~~~~~~~~~~m~~~~ 183 (662)
+.++|.+..+ ..+. .|....+.++-.+=...-+.+.+|..+.++.=+.. + +..++.++.+++.++.+++++
T Consensus 14 l~~~w~~l~~-~~~~----~~~~~~~~ii~~lP~~~Lv~fG~Ysl~~lgy~v~tFnDcpeA~~eL~~eI~eAK~dLr~kG 88 (91)
T PF08285_consen 14 LSALWLALLL-GLLP----LPPEPQQEIIPYLPFYALVSFGCYSLFTLGYGVATFNDCPEAAKELQKEIKEAKADLRKKG 88 (91)
T ss_pred HHHHHHHHHH-ccCC----CCchhHHHHHHHhhHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 4566666553 2221 23333444433333333344555666666655544 3 334466778888888998887
Q ss_pred CC
Q 006072 184 LG 185 (662)
Q Consensus 184 l~ 185 (662)
+.
T Consensus 89 v~ 90 (91)
T PF08285_consen 89 VD 90 (91)
T ss_pred CC
Confidence 64
No 230
>PF07697 7TMR-HDED: 7TM-HD extracellular; InterPro: IPR011624 This entry represents the extracellular domain of the 7TM-HD (7TM Receptors with HD hydrolase) protein family []. These proteins are known or predicted, to posses metal-dependent phospohydrolase activity.
Probab=35.49 E-value=38 Score=32.14 Aligned_cols=59 Identities=17% Similarity=0.319 Sum_probs=42.1
Q ss_pred hhchHHHHHHHHHHHHHHHhccccccc-CCCHHHHHHHHHhcccee--ccCCCeEEecCCccC
Q 006072 211 QDIPISIRAKISQTLYLPYIEKVPLFK-GCSSEFINQIVIRLHEEF--FLPGEVIMEKGNVVD 270 (662)
Q Consensus 211 ~~Lp~~L~~~i~~~~~~~~l~~~~~f~-~~~~~~~~~l~~~~~~~~--~~~ge~I~~~g~~~~ 270 (662)
..+|+. ...+...+...++.-.-+|. ..++....+......+.. +.+||.|+++|+..+
T Consensus 146 ~~~~~~-~~~~~~~l~~~~i~PNl~~d~~~T~~~~~~a~~~V~pv~~~V~~Ge~IV~kGe~VT 207 (222)
T PF07697_consen 146 SNLPSE-LRELLKELLSNFIRPNLIYDEEATEKAREEALASVSPVRGMVKKGEVIVRKGEIVT 207 (222)
T ss_pred cCCCHH-HHHHHHHHHHhcCCchhhcCHHHHHHHHHHHHhcCCchHhhccCCCEEecCCcEeC
Confidence 345555 44444555555555555554 567778888999999998 999999999999765
No 231
>PF06212 GRIM-19: GRIM-19 protein; InterPro: IPR009346 This family consists of several eukaryotic gene associated with retinoic-interferon-induced mortality 19 (GRIM-19) proteins. GRIM-19, was reported to encode a small protein primarily distributed in the nucleus and was able to promote cell death induced by IFN-beta and RA. A bovine homologue of GRIM-19 was co-purified with mitochondrial NADH:ubiquinone oxidoreductase (complex I) in bovine heart. Therefore, its exact cellular localisation and function are unclear. It has now been discovered that GRIM-19 is a specific interacting protein which negatively regulates Stat3 activity [].
Probab=35.33 E-value=1.8e+02 Score=24.98 Aligned_cols=32 Identities=22% Similarity=0.157 Sum_probs=19.9
Q ss_pred CCCHHHHHHHHHHHHHHHhhhccHhHHHhhch
Q 006072 183 RLGRDIRDQIIGHLRLQYESSYTEASVLQDIP 214 (662)
Q Consensus 183 ~l~~~l~~~i~~~~~~~~~~~~~~~~~l~~Lp 214 (662)
-+|--+.++=++|+....++...|.+++++.|
T Consensus 70 l~PlLqAE~DR~~lr~~~~~~~~E~~lMkdVp 101 (130)
T PF06212_consen 70 LLPLLQAEEDRRYLRRLKANREEEAELMKDVP 101 (130)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34444444556666666666667777877765
No 232
>COG2981 CysZ Uncharacterized protein involved in cysteine biosynthesis [Amino acid transport and metabolism]
Probab=35.13 E-value=4.1e+02 Score=25.39 Aligned_cols=27 Identities=19% Similarity=0.367 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 135 VFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 135 ~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
++.++..+.-.++++|+++.++.++..
T Consensus 71 v~~~la~L~lll~~~~lfs~v~~~IAa 97 (250)
T COG2981 71 LLWILAVLLLLLVFAFLFSTVANLIAA 97 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444455567778888888888766
No 233
>PRK13290 ectC L-ectoine synthase; Reviewed
Probab=34.34 E-value=1.4e+02 Score=25.39 Aligned_cols=69 Identities=14% Similarity=0.081 Sum_probs=39.1
Q ss_pred cceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEEccceeEEEe
Q 006072 252 HEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRI 329 (662)
Q Consensus 252 ~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a~~~~~l~~l 329 (662)
....+.||..+-..-....++++|++|++.+... .+++. ..+.+||++-- -.+.+..+.. .+++.++++
T Consensus 38 ~~~~l~pG~~~~~h~h~~~E~~yVL~G~~~~~~i-~~g~~---~~L~aGD~i~~---~~~~~H~~~N--~e~~~~l~v 106 (125)
T PRK13290 38 HETTIYAGTETHLHYKNHLEAVYCIEGEGEVEDL-ATGEV---HPIRPGTMYAL---DKHDRHYLRA--GEDMRLVCV 106 (125)
T ss_pred EEEEECCCCcccceeCCCEEEEEEEeCEEEEEEc-CCCEE---EEeCCCeEEEE---CCCCcEEEEc--CCCEEEEEE
Confidence 3446778865533222224799999999987511 12333 45899997642 1244444433 367766654
No 234
>PRK06298 type III secretion system protein; Validated
Probab=34.27 E-value=5.2e+02 Score=26.70 Aligned_cols=22 Identities=5% Similarity=0.039 Sum_probs=14.9
Q ss_pred HHHHHHHhhcCCCHHHHHHHHH
Q 006072 173 TDLMKYINRNRLGRDIRDQIIG 194 (662)
Q Consensus 173 ~~~~~~m~~~~l~~~l~~~i~~ 194 (662)
+++++-+++..=++.++.|+|+
T Consensus 219 qEvKdE~K~~EGdP~iK~rrR~ 240 (356)
T PRK06298 219 FEVKQEFKDTEGNPEIKGRRRQ 240 (356)
T ss_pred HHHHHHHHhccCCHHHHHHHHH
Confidence 5666666777777777776654
No 235
>PLN03077 Protein ECB2; Provisional
Probab=33.94 E-value=8.4e+02 Score=28.69 Aligned_cols=20 Identities=5% Similarity=-0.089 Sum_probs=10.5
Q ss_pred hHHHHHHcCCHHHHHHHHhc
Q 006072 546 PLDEGRMCGNKNLIKLLEDA 565 (662)
Q Consensus 546 pl~~A~~~~~~~iv~~Ll~~ 565 (662)
-+...++.|+.+-+.-+.+.
T Consensus 430 Li~~y~k~g~~~~A~~vf~~ 449 (857)
T PLN03077 430 LIEMYSKCKCIDKALEVFHN 449 (857)
T ss_pred HHHHHHHcCCHHHHHHHHHh
Confidence 34445556666555554443
No 236
>PHA02909 hypothetical protein; Provisional
Probab=33.49 E-value=1.2e+02 Score=21.19 Aligned_cols=24 Identities=25% Similarity=0.485 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 006072 50 IVKLIAVELYCSHIAACIFYYLAT 73 (662)
Q Consensus 50 ~~~l~~~~~~~~H~~aC~~~~i~~ 73 (662)
++-+++.++-+..++||.+.+++.
T Consensus 38 filfviiflsmftilacsyvyiai 61 (72)
T PHA02909 38 FILFVIIFLSMFTILACSYVYIAI 61 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444455555678888888764
No 237
>PF02037 SAP: SAP domain; InterPro: IPR003034 The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA binding domain found in diverse nuclear proteins involved in chromosomal organisation [], including in apoptosis []. In yeast, SAP is found in the most distal N-terminal region of E3 SUMO-protein ligase SIZ1, where it is involved in nuclear localization [].; GO: 0003676 nucleic acid binding; PDB: 2RNN_A 1JEQ_A 2KW9_A 2KVU_A 2DO1_A 1ZBU_B 1ZBH_A 2DO5_A 2RNO_A 1H1J_S ....
Probab=32.89 E-value=1e+02 Score=19.44 Aligned_cols=26 Identities=15% Similarity=0.391 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhcCCC-----HHHHHHHHHHH
Q 006072 171 KMTDLMKYINRNRLG-----RDIRDQIIGHL 196 (662)
Q Consensus 171 ~~~~~~~~m~~~~l~-----~~l~~~i~~~~ 196 (662)
+..++.++++.+++| .+|.+|+.+|+
T Consensus 5 ~v~eLk~~l~~~gL~~~G~K~~Li~Rl~~~l 35 (35)
T PF02037_consen 5 TVAELKEELKERGLSTSGKKAELIERLKEHL 35 (35)
T ss_dssp HHHHHHHHHHHTTS-STSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCCCCCCCHHHHHHHHHHhC
Confidence 356788888888887 67888887764
No 238
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=32.54 E-value=88 Score=28.39 Aligned_cols=59 Identities=14% Similarity=0.103 Sum_probs=36.6
Q ss_pred CccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEEccceeEEEecHH
Q 006072 267 NVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRIDKQ 332 (662)
Q Consensus 267 ~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a~~~~~l~~l~~~ 332 (662)
+..+++|++++|.+.+...+ +|+.. .-.+++|++|=-- .+.|..- ++.+.|..+.+.+.
T Consensus 52 ~~tdE~FyqleG~~~l~v~d-~g~~~-~v~L~eGd~fllP---~gvpHsP--~r~~~tv~LviE~~ 110 (177)
T PRK13264 52 DPGEEFFYQLEGDMYLKVQE-DGKRR-DVPIREGEMFLLP---PHVPHSP--QREAGSIGLVIERK 110 (177)
T ss_pred CCCceEEEEECCeEEEEEEc-CCcee-eEEECCCCEEEeC---CCCCcCC--ccCCCeEEEEEEeC
Confidence 45689999999998876543 44322 3458999976321 1344333 33567777777654
No 239
>PF03579 SHP: Small hydrophobic protein; InterPro: IPR005327 The small hydrophobic integral membrane protein, SH (previously designated 1A) is found to have a variety of glycosylated forms [, ]. This protein is a component of the mature respiratory syncytial virion [] where it may form complexes and appears to play a structural role.; GO: 0016020 membrane, 0016021 integral to membrane, 0048222 glycoprotein network
Probab=32.43 E-value=1.8e+02 Score=20.57 Aligned_cols=27 Identities=19% Similarity=0.296 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 135 VFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 135 ~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
.|+.+.|+.-++++-.+++.++.++..
T Consensus 17 YFtLi~M~lti~~~~Iv~si~~AILNK 43 (64)
T PF03579_consen 17 YFTLIFMMLTIGFFFIVTSIMAAILNK 43 (64)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777888888888888888888754
No 240
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.30 E-value=86 Score=35.71 Aligned_cols=212 Identities=17% Similarity=0.119 Sum_probs=108.1
Q ss_pred CCccceEEEccceeEEEecHHHHHHHHHHhhhcHHHHHHHHhcCCcchhhhhhhcCccccccchhhhhhhhhHhHHhccC
Q 006072 312 IPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHG 391 (662)
Q Consensus 312 ~~~~~~~~a~~~~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~~~~~~~~~~~l~~d~~~~~~~~~~~~~~~L~~A~~~g 391 (662)
...+..+.+.+.-.+++++++.=-+.+.-.|.....-+..+ +++-+.+..+.+ ...--|.
T Consensus 565 Ld~~iyitkv~gn~V~cl~rd~~~~~~~IDptEy~FKlALi--~k~ydeVl~lI~--------ns~LvGq---------- 624 (1202)
T KOG0292|consen 565 LDKPIYITKVKGNKVFCLNRDGEIECLTIDPTEYRFKLALL--NKKYDEVLHLIK--------NSNLVGQ---------- 624 (1202)
T ss_pred cccceEEEEeeCCEEEEEecCCCeEEEeechHHHHHHHHHH--hhhhHHHHHHHH--------hcCcccH----------
Confidence 34456667777778888888877666665554443322222 222222222221 1112223
Q ss_pred CHHHHHHHHHcCCC-CC-CCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q 006072 392 DLYQLEGLIRAGAD-PN-RTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEG 469 (662)
Q Consensus 392 ~~~~v~~Ll~~g~~-~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 469 (662)
.++.+|.++|.. +. ..=++..|-.-+|...|+++++--.....-+.+.-.. --..|...|+..+++...+.-
T Consensus 625 --aiIaYLqKkgypeiAL~FVkD~~tRF~LaLe~gnle~ale~akkldd~d~w~r----Lge~Al~qgn~~IaEm~yQ~~ 698 (1202)
T KOG0292|consen 625 --AIIAYLQKKGYPEIALHFVKDERTRFELALECGNLEVALEAAKKLDDKDVWER----LGEEALRQGNHQIAEMCYQRT 698 (1202)
T ss_pred --HHHHHHHhcCCcceeeeeecCcchheeeehhcCCHHHHHHHHHhcCcHHHHHH----HHHHHHHhcchHHHHHHHHHh
Confidence 334555555432 11 0013345666677788888776555554433332221 123466788888888888764
Q ss_pred CCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHH-HHHHHHHCCCCCCCCCCCCCChHH
Q 006072 470 ASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYL-MAKLLVEAGASVFPKDRWGNTPLD 548 (662)
Q Consensus 470 ~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~ga~~~~~d~~g~tpl~ 548 (662)
.+.+.- -++-...|+.+-++.+.+- -...++-.+-++.|...|..+ -++.|-. .|..||.
T Consensus 699 knfekL-----sfLYliTgn~eKL~Km~~i----ae~r~D~~~~~qnalYl~dv~ervkIl~n----------~g~~~la 759 (1202)
T KOG0292|consen 699 KNFEKL-----SFLYLITGNLEKLSKMMKI----AEIRNDATGQFQNALYLGDVKERVKILEN----------GGQLPLA 759 (1202)
T ss_pred hhhhhe-----eEEEEEeCCHHHHHHHHHH----HHhhhhhHHHHHHHHHhccHHHHHHHHHh----------cCcccHH
Confidence 433211 1112234555555555431 111122234567777777765 3444432 2666776
Q ss_pred H--HHHcCCHHHHHHHHhcccc
Q 006072 549 E--GRMCGNKNLIKLLEDAKST 568 (662)
Q Consensus 549 ~--A~~~~~~~iv~~Ll~~ga~ 568 (662)
| |+.+|..+..+-|.+.-..
T Consensus 760 ylta~~~G~~~~ae~l~ee~~~ 781 (1202)
T KOG0292|consen 760 YLTAAAHGLEDQAEKLGEELEK 781 (1202)
T ss_pred HHHHhhcCcHHHHHHHHHhhcc
Confidence 5 4556767888777665443
No 241
>PF02386 TrkH: Cation transport protein; InterPro: IPR003445 This family consists of various potassium transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J (3.6.1.34 from EC). These proteins are involved in active sodium up-take utilizing ATP in the process. TrkH from Escherichia coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in this organism []. This protein interacts with TrkA and requires TrkE for transport activity.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport; PDB: 3PJZ_A.
Probab=32.10 E-value=1.5e+02 Score=30.50 Aligned_cols=39 Identities=8% Similarity=0.319 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhcccCC--Ccc-cCChh---hHHHHHHHHHHHH
Q 006072 107 YITSMYASVVTMTTVGYG--DVH-AVNLR---EMVFIMIYVSFDM 145 (662)
Q Consensus 107 Y~~s~yw~~~t~ttvGyg--di~-p~~~~---e~~~~i~~~~~g~ 145 (662)
+.++++=+++.++|||.+ ..+ +.+.. .+++.++.|++|=
T Consensus 295 ~~~~lfe~~Sa~gtvGls~G~~~~~~s~~~~~~K~vli~~M~~GR 339 (354)
T PF02386_consen 295 FFDALFEVISAFGTVGLSLGITTPNLSFSGPFSKLVLIFLMLLGR 339 (354)
T ss_dssp -HHHHHHHHHHCTT--S--SSS----SSS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcCCCCCCCCCCccchhhHHHHHHHHHHHHhC
Confidence 578999999999999854 422 23444 8999999999884
No 242
>PF12597 DUF3767: Protein of unknown function (DUF3767); InterPro: IPR022533 This group of proteins includes mitochodrial cytochrome c oxidase proteins [], and some transmembrane domain-containing proteins of unknown function known as FAM36A. Proteins in this family are typically between 112 and 199 amino acids in length.
Probab=31.15 E-value=83 Score=26.52 Aligned_cols=65 Identities=12% Similarity=0.128 Sum_probs=36.3
Q ss_pred HHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHh
Q 006072 109 TSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYIN 180 (662)
Q Consensus 109 ~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~m~ 180 (662)
.|+-|++.+..+||-.-..-....-+ -....+.+|++++++.+..-.....+-+++++.+.+-|+
T Consensus 42 ~slL~Gi~~G~~vG~~~fl~~~~~~~-------A~nwavgsF~l~s~~~we~Cr~~r~~~~~~~~~~~e~~~ 106 (118)
T PF12597_consen 42 DSLLYGIAGGFGVGGLRFLFTSNPRK-------AANWAVGSFFLGSLGSWEYCRYNRRKERQQMKRAVEAMQ 106 (118)
T ss_pred HHHHHHHHHHHHHHhhhhcccCCCcc-------chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999998555433332211 134556667777777776553222233334444444443
No 243
>PRK04190 glucose-6-phosphate isomerase; Provisional
Probab=30.26 E-value=1.7e+02 Score=27.18 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=31.4
Q ss_pred cceeccCCCeE---------EecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccc
Q 006072 252 HEEFFLPGEVI---------MEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSF 303 (662)
Q Consensus 252 ~~~~~~~ge~I---------~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~f 303 (662)
-...+.||... ++......++|++++|+..+...+.+|. .....+.+|+++
T Consensus 71 g~t~l~PG~~g~e~~mt~gH~H~~~~~~EiyyvlsG~g~~~l~~~~G~-~~~~~v~pGd~v 130 (191)
T PRK04190 71 GTTRLYPGKVGDEYFMTKGHFHAKADRAEIYYGLKGKGLMLLQDPEGE-ARWIEMEPGTVV 130 (191)
T ss_pred EEEEECCCcEecccccCCCeEcCCCCCCEEEEEEeCEEEEEEecCCCc-EEEEEECCCCEE
Confidence 34456677643 3333334599999999988775444333 233457888864
No 244
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=29.82 E-value=4.4e+02 Score=24.10 Aligned_cols=98 Identities=9% Similarity=0.100 Sum_probs=47.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceEEeeccCCCCCcchhhccchHHHHHHHHHH
Q 006072 34 FHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYA 113 (662)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw 113 (662)
+..+...+..+.....++.+++..++-..-+-..++++.+... +....+|. |. .....-..-+-|
T Consensus 111 lsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~a-d~sqr~~~---------~K-----~~lv~~~sm~lW 175 (226)
T COG4858 111 LSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRA-DNSQRPGT---------WK-----YLLVAVLSMLLW 175 (226)
T ss_pred HHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhc-ccccCCch---------HH-----HHHHHHHHHHHH
Confidence 3444444445544445555555555544444444555554433 22222221 10 000111234557
Q ss_pred HHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHHHH
Q 006072 114 SVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAY 150 (662)
Q Consensus 114 ~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~ 150 (662)
..+++.|+ ..|.+..-.+=.+...++|.+.+|.
T Consensus 176 i~v~i~t~----~lPtslN~~L~pi~l~IiGav~lal 208 (226)
T COG4858 176 IAVMIATV----FLPTSLNPQLPPIALTIIGAVILAL 208 (226)
T ss_pred HHHHHHHh----hCCCcCCcCCchHHHHHHHHHHHHH
Confidence 77776654 3455555555566677788777754
No 245
>PRK12772 bifunctional flagellar biosynthesis protein FliR/FlhB; Provisional
Probab=29.50 E-value=5.8e+02 Score=28.62 Aligned_cols=61 Identities=10% Similarity=0.080 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Q 006072 135 VFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGH 195 (662)
Q Consensus 135 ~~~i~~~~~g~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~~ 195 (662)
+...+..++..+..++++-.+..+..+ -...++.+=..+++++-+|+.+=+++++.|+|+-
T Consensus 442 ~~~~~~~l~~~~~~~~~via~~D~~~q~~~~~k~lkMskqEvK~E~Ke~EGdP~iK~r~R~~ 503 (609)
T PRK12772 442 LKSLVISIFFRITLIMIIIAVADYVYQKYQYNKDLRMTKQEVKEEYKQDEGDPQIKAKIKQK 503 (609)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHHHH
Confidence 333334444444444444444454433 2222223333467777777888888888777653
No 246
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=29.20 E-value=44 Score=30.47 Aligned_cols=47 Identities=23% Similarity=0.274 Sum_probs=32.8
Q ss_pred CCCCcHHHHHHHcCcHHHHH-HHHhcCCC----CcccCCCCCcHHHHHHHhC
Q 006072 411 YDGRSPLHLAASRGYEEIMT-FLIQKGVD----INLKDNFGNTPLLEAIKYG 457 (662)
Q Consensus 411 ~~g~t~L~~A~~~~~~~~v~-~Ll~~g~~----~~~~~~~g~t~L~~A~~~~ 457 (662)
.+...|||-|+.-++.+++- ++++..+. +|..|.+|..+|.+|....
T Consensus 220 ~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~ 271 (280)
T KOG4591|consen 220 GKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCRE 271 (280)
T ss_pred CCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHH
Confidence 34456888888888888774 56665443 4667778888888876543
No 247
>PRK12468 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=29.20 E-value=5.4e+02 Score=26.91 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q 006072 137 IMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 194 (662)
Q Consensus 137 ~i~~~~~g~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~l~~~l~~~i~~ 194 (662)
.++..++..++.++++-.+..++.+ -...++.+=..+++++-+++..=++.++.|+|+
T Consensus 188 ~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMSkqEvKdE~K~~EGdP~iK~r~Rq 246 (386)
T PRK12468 188 HLIIFCGLVVVLGLSPMVGFDVFYQITSHIKKLRMTKQDIRDEFKNQEGDPHVKGRIRQ 246 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 3333344444444444445554433 222222222335666666777777777776654
No 248
>TIGR00934 2a38euk potassium uptake protein, Trk family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.
Probab=28.87 E-value=5.7e+02 Score=29.46 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=22.8
Q ss_pred HHHhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 006072 38 EKDIRINYMFS-RIVKLIAVELYCSHIAACIFYYL 71 (662)
Q Consensus 38 ~~~~~~~~~~~-~~~~l~~~~~~~~H~~aC~~~~i 71 (662)
++...+.|... .+.+++..+++.+|+++++....
T Consensus 438 eeLGGiEYRaLk~L~~Iv~~Y~~~~~llG~i~l~~ 472 (800)
T TIGR00934 438 DELGGIEYRALKCLCSIVLVYFLGFNILGFVLLLP 472 (800)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555444 46777778888999999886544
No 249
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=28.79 E-value=1.1e+02 Score=26.10 Aligned_cols=47 Identities=21% Similarity=0.296 Sum_probs=31.5
Q ss_pred hccceeccCCCeE-EecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCcc
Q 006072 250 RLHEEFFLPGEVI-MEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSS 302 (662)
Q Consensus 250 ~~~~~~~~~ge~I-~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~ 302 (662)
.+....++||+-+ .+.-...+++|+|++|...+.. ++.+ ..+++|++
T Consensus 37 ~~~~~~v~pg~~~~~~~H~~~dE~~~Vl~G~g~v~~---~~~~---~~v~~gd~ 84 (127)
T COG0662 37 SIARILVKPGEEISLHHHHHRDEHWYVLEGTGKVTI---GGEE---VEVKAGDS 84 (127)
T ss_pred EEEEEEECCCcccCcccccCcceEEEEEeeEEEEEE---CCEE---EEecCCCE
Confidence 3555677787774 5555557899999999988765 2333 23566664
No 250
>PRK11677 hypothetical protein; Provisional
Probab=28.78 E-value=3e+02 Score=23.80 Aligned_cols=9 Identities=22% Similarity=0.778 Sum_probs=5.0
Q ss_pred HHHHHHHHH
Q 006072 189 RDQIIGHLR 197 (662)
Q Consensus 189 ~~~i~~~~~ 197 (662)
+++|.+||.
T Consensus 49 kqeV~~HFa 57 (134)
T PRK11677 49 RQELVSHFA 57 (134)
T ss_pred HHHHHHHHH
Confidence 355666655
No 251
>PF07527 Hairy_orange: Hairy Orange; InterPro: IPR003650 This domain confers specificity among members of the Hairy/E(SPL) family. HES-2 (hairy and enhancer of split 2) is a transcription factor, and the hairy protein is a pair-rule protein that regulates embryonic segmentation and adult bristle patterning. These proteins are transcriptional repressors of genes that require the BHLH protein for their transcription.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DB7_A.
Probab=28.41 E-value=1.8e+02 Score=19.24 Aligned_cols=34 Identities=9% Similarity=0.406 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHH
Q 006072 167 KFRDKMTDLMKYINRN-RLGRDIRDQIIGHLRLQY 200 (662)
Q Consensus 167 ~~~~~~~~~~~~m~~~-~l~~~l~~~i~~~~~~~~ 200 (662)
-|++-+.++.+||... ++++.++.++..|+....
T Consensus 6 Gy~~C~~Ev~~fL~~~~~~~~~~~~rLl~HL~~~~ 40 (43)
T PF07527_consen 6 GYSECLNEVSRFLSSVEGVDPGVRARLLSHLQSCL 40 (43)
T ss_dssp HHHHHHHHHHHHHHHTS---THHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHh
Confidence 4888999999998654 467799999999887654
No 252
>COG1615 Uncharacterized conserved protein [Function unknown]
Probab=28.05 E-value=56 Score=36.25 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=31.1
Q ss_pred HhhcccCCCcccCChhhHHHHHHHHHHHHHHHHHHH
Q 006072 117 TMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLI 152 (662)
Q Consensus 117 t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~~~~i 152 (662)
+.|+-||.||...-+...+++++.+++++.+|..++
T Consensus 221 ~~~GA~YTDI~~~lP~~~iL~aial~~aia~f~ai~ 256 (885)
T COG1615 221 TFTGAGYTDINAQLPAKLILIAIALLCAIAFFSAIF 256 (885)
T ss_pred cccccCceeeeeeccHHHHHHHHHHHHHHHHHHHHH
Confidence 778899999999999999999999888887776544
No 253
>PLN03077 Protein ECB2; Provisional
Probab=27.62 E-value=1.1e+03 Score=27.86 Aligned_cols=179 Identities=13% Similarity=0.060 Sum_probs=99.3
Q ss_pred hhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHH-HHHcCcHH----HHHHHHhcCCCCcccCCCCCcHHHHHHH
Q 006072 381 ALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHL-AASRGYEE----IMTFLIQKGVDINLKDNFGNTPLLEAIK 455 (662)
Q Consensus 381 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 455 (662)
.+-+..-++.|+++....+.+.-...| ..-++.|.. .++.|..+ +.+.+.+.|..||.... .+.+...+.
T Consensus 226 n~Li~~y~k~g~~~~A~~lf~~m~~~d---~~s~n~li~~~~~~g~~~eAl~lf~~M~~~g~~Pd~~ty--~~ll~a~~~ 300 (857)
T PLN03077 226 NALITMYVKCGDVVSARLVFDRMPRRD---CISWNAMISGYFENGECLEGLELFFTMRELSVDPDLMTI--TSVISACEL 300 (857)
T ss_pred hHHHHHHhcCCCHHHHHHHHhcCCCCC---cchhHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCChhHH--HHHHHHHHh
Confidence 344556677788888888777644333 233444443 34555543 33333445666553321 133444455
Q ss_pred hCCHHHH----HHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH-HHhCcHH----HH
Q 006072 456 YGNDGAA----SLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVA-ASEGLYL----MA 526 (662)
Q Consensus 456 ~~~~~~v----~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A-~~~~~~~----~v 526 (662)
.|..+.. ....+.|..++.....+.+..-++.|+.+-...+.+.-.. +|..-+|.+..+ ++.|..+ +.
T Consensus 301 ~g~~~~a~~l~~~~~~~g~~~d~~~~n~Li~~y~k~g~~~~A~~vf~~m~~---~d~~s~n~li~~~~~~g~~~~A~~lf 377 (857)
T PLN03077 301 LGDERLGREMHGYVVKTGFAVDVSVCNSLIQMYLSLGSWGEAEKVFSRMET---KDAVSWTAMISGYEKNGLPDKALETY 377 (857)
T ss_pred cCChHHHHHHHHHHHHhCCccchHHHHHHHHHHHhcCCHHHHHHHHhhCCC---CCeeeHHHHHHHHHhCCCHHHHHHHH
Confidence 5665544 4445567777766667778888888998888777765332 333345555544 3455543 44
Q ss_pred HHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHH----HHhccccc
Q 006072 527 KLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKL----LEDAKSTQ 569 (662)
Q Consensus 527 ~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~----Ll~~ga~~ 569 (662)
+.+.+.|..+|.... .+.+...+..|+.+.+.- ..+.|..+
T Consensus 378 ~~M~~~g~~Pd~~t~--~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~ 422 (857)
T PLN03077 378 ALMEQDNVSPDEITI--ASVLSACACLGDLDVGVKLHELAERKGLIS 422 (857)
T ss_pred HHHHHhCCCCCceeH--HHHHHHHhccchHHHHHHHHHHHHHhCCCc
Confidence 444556766655332 234555666777665544 44555443
No 254
>smart00511 ORANGE Orange domain. This domain confers specificity among members of the Hairy/E(SPL) family.
Probab=27.44 E-value=1.9e+02 Score=19.26 Aligned_cols=35 Identities=14% Similarity=0.474 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHH
Q 006072 166 EKFRDKMTDLMKYINRN-RLGRDIRDQIIGHLRLQY 200 (662)
Q Consensus 166 ~~~~~~~~~~~~~m~~~-~l~~~l~~~i~~~~~~~~ 200 (662)
.-|.+-+.++.+||... .++..++.++..|+....
T Consensus 5 ~Gy~~C~~Ev~~fLs~~~~~~~~~~~~Ll~HL~~~~ 40 (45)
T smart00511 5 SGYRECANEVSRFLSQLPGTDPDVRARLLSHLQTHL 40 (45)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHH
Confidence 35889999999999854 678999999999987544
No 255
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=27.37 E-value=41 Score=24.12 Aligned_cols=18 Identities=33% Similarity=0.645 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHhhcccC
Q 006072 106 SYITSMYASVVTMTTVGY 123 (662)
Q Consensus 106 ~Y~~s~yw~~~t~ttvGy 123 (662)
+|+..+.|++.-.--+||
T Consensus 2 kyivt~fWs~il~~vvgy 19 (57)
T PF11151_consen 2 KYIVTFFWSFILGEVVGY 19 (57)
T ss_pred cEEehhHHHHHHHHHHHH
Confidence 477788888876666665
No 256
>PF13128 DUF3954: Protein of unknown function (DUF3954)
Probab=26.62 E-value=1.3e+02 Score=20.77 Aligned_cols=15 Identities=20% Similarity=0.386 Sum_probs=12.5
Q ss_pred CeEEEEEeCEEEEEe
Q 006072 270 DQLYFVCLGKLEEVG 284 (662)
Q Consensus 270 ~~~y~i~~G~v~~~~ 284 (662)
+.+|++.+|++..+.
T Consensus 10 ngiYiV~~G~v~~i~ 24 (50)
T PF13128_consen 10 NGIYIVKDGEVTFIE 24 (50)
T ss_pred CeEEEEECCeEEEcC
Confidence 579999999988664
No 257
>PF14377 DUF4414: Domain of unknown function (DUF4414)
Probab=26.11 E-value=1.6e+02 Score=24.26 Aligned_cols=46 Identities=20% Similarity=0.322 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHHHHHHHh-h--------h------ccHhHHHhhchHHHHHHHHHHHHHH
Q 006072 183 RLGRDIRDQIIGHLRLQYE-S--------S------YTEASVLQDIPISIRAKISQTLYLP 228 (662)
Q Consensus 183 ~l~~~l~~~i~~~~~~~~~-~--------~------~~~~~~l~~Lp~~L~~~i~~~~~~~ 228 (662)
.||.+++.+|..-...... . . .-..++|..||+.+|.+|..+....
T Consensus 8 aLPeDiR~Evl~~~~~~~~~~~~~~~~~~~~~~~~~~I~pefL~ALP~diR~EVl~qe~~~ 68 (108)
T PF14377_consen 8 ALPEDIREEVLAQQQRERRAQASQRQSPQSSAPQPSQIDPEFLAALPPDIREEVLAQERRE 68 (108)
T ss_pred HCCHHHHHHHHHHHHhhccchhcccCcccccCCCccccCHHHHHhCCHHHHHHHHHHHHHH
Confidence 4788888887443332211 0 0 1145899999999999998776655
No 258
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=26.01 E-value=1.3e+02 Score=25.75 Aligned_cols=49 Identities=20% Similarity=0.106 Sum_probs=35.6
Q ss_pred ccceeccCCCeEEecCCc-cCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccc
Q 006072 251 LHEEFFLPGEVIMEKGNV-VDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGE 305 (662)
Q Consensus 251 ~~~~~~~~ge~I~~~g~~-~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe 305 (662)
+....|.||..+-..--+ .+...++++|.++... +|.. ..+.+||++-.
T Consensus 45 ~~~v~~~~G~~~~~H~hp~~~~~~~Vl~G~~~~~~---~g~~---~~l~~Gd~i~i 94 (131)
T COG1917 45 VVLVTFEPGAVIPWHTHPLGEQTIYVLEGEGTVQL---EGEK---KELKAGDVIII 94 (131)
T ss_pred EEEEEECCCcccccccCCCcceEEEEEecEEEEEe---cCCc---eEecCCCEEEE
Confidence 345578888888777665 6689999999998765 2333 45789998754
No 259
>PF03607 DCX: Doublecortin; InterPro: IPR003533 X-linked lissencephaly is a severe brain malformation affecting males. Recently it has been demonstrated that the doublecortin gene is implicated in this disorder []. Doublecortin was found to bind to the microtubule cytoskeleton. In vivo and in vitro assays show that Doublecortin stabilises microtubules and causes bundling []. Doublecortin is a basic protein with an iso-electric point of 10, typical of microtubule-binding proteins. However, its sequence contains no known microtubule-binding domain(s). The detailed sequence analysis of Doublecortin and Doublecortin-like proteins allowed the identification of an evolutionarily conserved Doublecortin (DC) domain. This domain is found in the N terminus of proteins and consists of one or two tandemly repeated copies of an around 80 amino acids region. It has been suggested that the first DC domain of Doublecortin binds tubulin and enhances microtubule polymerisation []. Some proteins known to contain a DC domain are listed below: Doublecortin. It is required for neuronal migration []. A large number of point mutations in the human DCX gene leading to lissencephaly are located within the DC domains []. Human serine/threonine-protein kinase DCAMKL1. It is a probable kinase that may be involved in a calcium-signaling pathway controling neuronal migration in the developing brain []. Retinitis pigmentosa 1 protein. It could play a role in the differentiation of photoreceptor cells. Mutation in the human RP1 gene cause retinitis pigmentosa of type 1 []. ; GO: 0035556 intracellular signal transduction; PDB: 1UF0_A 1MG4_A 1MFW_A 2DNF_A 2XRP_I 2BQQ_A 1MJD_A.
Probab=25.31 E-value=98 Score=22.34 Aligned_cols=47 Identities=15% Similarity=0.401 Sum_probs=34.3
Q ss_pred CcHHHHHHHHHhHcCCC-CCcccccCCCceeeeeeeeecCCeEEEeecC
Q 006072 614 QNIKDLIKTAAEQLDFR-GGDCILSSEGGKILDVDMINDDQKLYLIQET 661 (662)
Q Consensus 614 ~~~~el~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 661 (662)
.+++.+++...++.... +-.++.+-+|.++.+++-++||+. |+|++.
T Consensus 9 ~s~e~lL~~it~~v~l~~gVr~lyt~~G~~V~~l~~l~dg~~-yVa~g~ 56 (60)
T PF03607_consen 9 RSFEQLLDEITEKVQLPSGVRKLYTLDGKRVKSLDELEDGGS-YVASGR 56 (60)
T ss_dssp SSHHHHHHHHHHSSSSTTS-SEEEETTSSEESSGGGS-TTEE-EEEESS
T ss_pred cCHHHHHHHHHhhcCCCcccceEECCCCCEeCCHHHHCCCCE-EEEEcC
Confidence 36888888888887754 235667788999999999999865 666653
No 260
>COG4325 Predicted membrane protein [Function unknown]
Probab=25.27 E-value=3.9e+02 Score=27.58 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHHhhccc-----CCCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006072 103 FWKSYITSMYASVVTMTTVG-----YGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 103 ~~~~Y~~s~yw~~~t~ttvG-----ygdi~p~~~~e~~~~i~~~~~g~~~~~~~i~~i~~~~~~ 161 (662)
....++..|-|++..++||| ||-..|.-. ...+++..++.+..+.|++..++..++-
T Consensus 129 vLa~FlctFvysl~vlrtvg~e~d~~g~FIp~~a--vtv~lLlaiisig~~iyfl~~l~~siq~ 190 (464)
T COG4325 129 VLAIFLCTFVYSLGVLRTVGEERDGQGAFIPKVA--VTVSLLLAIISIGALIYFLHHLMHSIQI 190 (464)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccCccccceehHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34679999999999999997 334444422 2345556667777777888777766643
No 261
>TIGR00934 2a38euk potassium uptake protein, Trk family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.
Probab=25.18 E-value=1.7e+02 Score=33.36 Aligned_cols=47 Identities=17% Similarity=0.251 Sum_probs=34.3
Q ss_pred ccchHHHHHHHHHHHHHHhhcccCC--CcccCChhhHHHHHHHHHHHHHH
Q 006072 100 EIGFWKSYITSMYASVVTMTTVGYG--DVHAVNLREMVFIMIYVSFDMIL 147 (662)
Q Consensus 100 ~~~~~~~Y~~s~yw~~~t~ttvGyg--di~p~~~~e~~~~i~~~~~g~~~ 147 (662)
+.+++.+.+.+++-++++ -|.|+. |+...++.-.++.+++|++|..=
T Consensus 614 ~lp~g~Ril~aLFQSVst-RTAGFntVdls~Lspatlvl~iiLMyIGa~P 662 (800)
T TIGR00934 614 GLSKGIKVLNGLFQSVST-RTAGFTVVDLSQLHPAIQVSYMLMMYVSVLP 662 (800)
T ss_pred cCCHHHHHHHHHHHhccc-ccccccccchHhcChhHHHHHHHHHHhccCC
Confidence 345567899999988887 677876 34455666678888888888754
No 262
>PRK13700 conjugal transfer protein TraD; Provisional
Probab=25.07 E-value=9.9e+02 Score=27.36 Aligned_cols=20 Identities=15% Similarity=0.179 Sum_probs=11.2
Q ss_pred hHhHHhccCCHHHHHHHHHc
Q 006072 383 KVNSAAYHGDLYQLEGLIRA 402 (662)
Q Consensus 383 ~L~~A~~~g~~~~v~~Ll~~ 402 (662)
.|..+....+.+.++.+++.
T Consensus 303 ~L~~~Ll~~~~e~L~~~L~~ 322 (732)
T PRK13700 303 KLVDTLLSIKIEKLRTYLRN 322 (732)
T ss_pred HHHHHHHhCCHHHHHHHHhc
Confidence 45555555566666666643
No 263
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding
Probab=25.02 E-value=5e+02 Score=23.18 Aligned_cols=21 Identities=19% Similarity=0.319 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHc
Q 006072 141 VSFDMILGAYLIGNMTALIVK 161 (662)
Q Consensus 141 ~~~g~~~~~~~i~~i~~~~~~ 161 (662)
.+++++...+++..+..+..+
T Consensus 144 ~~~~~~~~~l~~~~~~~i~~n 164 (174)
T PF01529_consen 144 IFFFIFVGFLLIFQLYLILRN 164 (174)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 333344444444455555544
No 264
>PRK11171 hypothetical protein; Provisional
Probab=24.40 E-value=1.8e+02 Score=28.65 Aligned_cols=70 Identities=14% Similarity=-0.001 Sum_probs=42.6
Q ss_pred cceeccCCCeEEecCCc--cCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccchhhhccCCccceEEEccceeEEEe
Q 006072 252 HEEFFLPGEVIMEKGNV--VDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRI 329 (662)
Q Consensus 252 ~~~~~~~ge~I~~~g~~--~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~~~l~~~~~~~~~~a~~~~~l~~l 329 (662)
....+.||...-..... .+++++|++|++.+.. ++.. ..+.+||++= +-.+.+..+.....+.++++.+
T Consensus 64 ~~~~l~PG~~~~~~~h~~~~eE~~~VlsG~l~v~~---~g~~---~~L~~GDsi~---~p~~~~H~~~N~g~~~a~~l~v 134 (266)
T PRK11171 64 YLVEVEPGGGSDQPEPDEGAETFLFVVEGEITLTL---EGKT---HALSEGGYAY---LPPGSDWTLRNAGAEDARFHWI 134 (266)
T ss_pred EEEEECCCCcCCCCCCCCCceEEEEEEeCEEEEEE---CCEE---EEECCCCEEE---ECCCCCEEEEECCCCCEEEEEE
Confidence 44467777644333222 3589999999998764 3332 4588898652 2235566555555566777765
Q ss_pred c
Q 006072 330 D 330 (662)
Q Consensus 330 ~ 330 (662)
.
T Consensus 135 ~ 135 (266)
T PRK11171 135 R 135 (266)
T ss_pred E
Confidence 3
No 265
>smart00805 AGTRAP Angiotensin II, type I receptor-associated protein. This family consists of several angiotensin II, type I receptor-associated protein (AGTRAP) sequences. AGTRAP is known to interact specifically with the C-terminal cytoplasmic region of the angiotensin II type 1 (AT(1)) receptor to regulate different aspects of AT(1) receptor physiology. The function of this family is unclear.
Probab=24.35 E-value=3e+02 Score=24.18 Aligned_cols=40 Identities=15% Similarity=0.292 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCceEEeeccCCCCCcchhhccchHHHHHHHHHHHHHH
Q 006072 57 ELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVT 117 (662)
Q Consensus 57 ~~~~~H~~aC~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t 117 (662)
.++++||+-..|-..+. |.+. .|.|.+ ..|+.+..||+..
T Consensus 10 ~i~~vH~ll~~wa~~~~----------W~p~----aY~f~N-------f~~l~~~~WAi~~ 49 (159)
T smart00805 10 VILFVHWLLTTWACLVS----------WFSG----AYAWAN-------FTILALGVWAVAQ 49 (159)
T ss_pred HHHHHHHHHHHHHHhcc----------cccc----hhHHHh-------HHHHHHHHHHHHh
Confidence 45667888777776642 3221 122222 4689999999884
No 266
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=23.47 E-value=1.7e+02 Score=31.35 Aligned_cols=203 Identities=18% Similarity=0.138 Sum_probs=0.0
Q ss_pred cchhhhccCCccceEEEccc--eeEEEecHHHHHHHHHHhhhcHHHHHHHHhcCCcchhhhhhhc-Cccccccchhhhhh
Q 006072 304 GEVSILCNIPQPYTVQVCEL--CRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQGKESDLRLKQLQ-SDITFHISKHEAEL 380 (662)
Q Consensus 304 Ge~~~l~~~~~~~~~~a~~~--~~l~~l~~~~~~~~l~~~~~~~~~il~~l~~~~~~~~~~~~l~-~d~~~~~~~~~~~~ 380 (662)
|+...+...+++........ ..++.++|+. .+....-......++..+.+++...+.+... +.+-..++ ...+
T Consensus 223 Ge~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~--~v~~~~ld~~~~~fk~av~~~d~~~v~~~i~~~~ll~~i~--~~~~ 298 (443)
T PF04053_consen 223 GETGIIAHLDKPLYLLGYLPKENRLYLIDRDG--NVISYELDLSELEFKTAVLRGDFEEVLRMIAASNLLPNIP--KDQG 298 (443)
T ss_dssp TEEEEEEE-SS--EEEEEETTTTEEEEE-TT----EEEEE--HHHHHHHHHHHTT-HHH-----HHHHTGGG----HHHH
T ss_pred CCcceEEEcCCceEEEEEEccCCEEEEEECCC--CEEEEEECHHHHHHHHHHHcCChhhhhhhhhhhhhcccCC--hhHH
Q ss_pred hhhHhHHhccCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCcHHHHHHHhCCHH
Q 006072 381 ALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDG 460 (662)
Q Consensus 381 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 460 (662)
.....+--..|..+..-.+ -.+-.+-..+|.+.|+.+.+.-+.+.-.++..-.. --..|...|+.+
T Consensus 299 ~~i~~fL~~~G~~e~AL~~----------~~D~~~rFeLAl~lg~L~~A~~~a~~~~~~~~W~~----Lg~~AL~~g~~~ 364 (443)
T PF04053_consen 299 QSIARFLEKKGYPELALQF----------VTDPDHRFELALQLGNLDIALEIAKELDDPEKWKQ----LGDEALRQGNIE 364 (443)
T ss_dssp HHHHHHHHHTT-HHHHHHH----------SS-HHHHHHHHHHCT-HHHHHHHCCCCSTHHHHHH----HHHHHHHTTBHH
T ss_pred HHHHHHHHHCCCHHHHHhh----------cCChHHHhHHHHhcCCHHHHHHHHHhcCcHHHHHH----HHHHHHHcCCHH
Q ss_pred HHHHHHHcCCCCcccccchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhCcHH-HHHHHHHCC
Q 006072 461 AASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYL-MAKLLVEAG 533 (662)
Q Consensus 461 ~v~~Ll~~g~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g 533 (662)
+++.-.++..|. ...+.+....|+.+-++.|. +.-....+-+.+++.|...|+.+ ++++|++.|
T Consensus 365 lAe~c~~k~~d~-----~~L~lLy~~~g~~~~L~kl~----~~a~~~~~~n~af~~~~~lgd~~~cv~lL~~~~ 429 (443)
T PF04053_consen 365 LAEECYQKAKDF-----SGLLLLYSSTGDREKLSKLA----KIAEERGDINIAFQAALLLGDVEECVDLLIETG 429 (443)
T ss_dssp HHHHHHHHCT-H-----HHHHHHHHHCT-HHHHHHHH----HHHHHTT-HHHHHHHHHHHT-HHHHHHHHHHTT
T ss_pred HHHHHHHhhcCc-----cccHHHHHHhCCHHHHHHHH----HHHHHccCHHHHHHHHHHcCCHHHHHHHHHHcC
No 267
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=23.45 E-value=9.6e+02 Score=25.93 Aligned_cols=33 Identities=9% Similarity=0.381 Sum_probs=23.9
Q ss_pred hHHHHHHH-HHHHHHHhhcccCCCcccCChhhHHHHHHHHH
Q 006072 103 FWKSYITS-MYASVVTMTTVGYGDVHAVNLREMVFIMIYVS 142 (662)
Q Consensus 103 ~~~~Y~~s-~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~ 142 (662)
.|-..+.| ++|+.. .|++......|.+..+...
T Consensus 140 lw~~~vvS~lFW~fa-------ndi~t~~qakRfy~l~~~g 173 (472)
T TIGR00769 140 LWGSVVLSLLFWGFA-------NQITTIDEAKRFYALFGLG 173 (472)
T ss_pred HHHHHHHHHHHHHHH-------HhcCCHHHHHHHHHHHHHH
Confidence 44566777 888888 4777788888888765544
No 268
>PF13623 SurA_N_2: SurA N-terminal domain
Probab=23.28 E-value=5.1e+02 Score=22.72 Aligned_cols=43 Identities=9% Similarity=0.285 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---cC-----------cccHHHHHHHHHHHHHHh
Q 006072 138 MIYVSFDMILGAYLIGNMTALIV---KG-----------SKTEKFRDKMTDLMKYIN 180 (662)
Q Consensus 138 i~~~~~g~~~~~~~i~~i~~~~~---~~-----------~~~~~~~~~~~~~~~~m~ 180 (662)
+++.++|+.+||++++-+...-. +. -..++|+.+++...+.++
T Consensus 10 lLi~vIglAL~aFIv~d~~~~~~~~~~~~~~VG~VnGe~Is~~ef~~~v~~~~~~~k 66 (145)
T PF13623_consen 10 LLIIVIGLALFAFIVGDFRSGSGFFGSSQNVVGEVNGEKISYQEFQQRVEQATENYK 66 (145)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcCCCCCeeEeECCEEcCHHHHHHHHHHHHHHHH
Confidence 56788999999999976533211 10 134579999988886665
No 269
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=23.12 E-value=1.4e+02 Score=30.89 Aligned_cols=52 Identities=10% Similarity=-0.009 Sum_probs=34.6
Q ss_pred ccceeccCCCeEEecCC-ccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccc
Q 006072 251 LHEEFFLPGEVIMEKGN-VVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSF 303 (662)
Q Consensus 251 ~~~~~~~~ge~I~~~g~-~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~f 303 (662)
+....+.||...-..=- ..++++||++|+.++...+.+++... ..+++||++
T Consensus 247 ~~~~~l~PG~~~~~H~H~~~~E~~yvl~G~~~~~v~d~~g~~~~-~~l~~GD~~ 299 (367)
T TIGR03404 247 AAIVTVEPGAMRELHWHPNADEWQYFIQGQARMTVFAAGGNART-FDYQAGDVG 299 (367)
T ss_pred EEEEEECCCCccCCeeCcCCCeEEEEEEEEEEEEEEecCCcEEE-EEECCCCEE
Confidence 45556777776543332 35689999999998876555554333 458999854
No 270
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=23.09 E-value=1.4e+02 Score=30.92 Aligned_cols=52 Identities=15% Similarity=0.219 Sum_probs=33.8
Q ss_pred ccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccc
Q 006072 251 LHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSF 303 (662)
Q Consensus 251 ~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~f 303 (662)
+....+.||...-..--...++.++++|++.+...+.+|+. ....+++||+|
T Consensus 69 ~~~~~l~pG~~~~~HwH~~~E~~yVl~G~~~v~~~d~~g~~-~~~~L~~GD~~ 120 (367)
T TIGR03404 69 GVNMRLEPGAIRELHWHKEAEWAYVLYGSCRITAVDENGRN-YIDDVGAGDLW 120 (367)
T ss_pred ceEEEEcCCCCCCcccCCCceEEEEEeeEEEEEEEcCCCcE-EEeEECCCCEE
Confidence 33446667765433222346899999999998875544443 33468999976
No 271
>PF00190 Cupin_1: Cupin; InterPro: IPR006045 This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant. ; GO: 0045735 nutrient reservoir activity; PDB: 2E9Q_A 2EVX_A 1OD5_A 1UCX_A 1UD1_C 1FXZ_C 3KGL_C 3KSC_D 1UIJ_F 1IPK_B ....
Probab=22.63 E-value=1.4e+02 Score=26.09 Aligned_cols=52 Identities=17% Similarity=0.261 Sum_probs=33.6
Q ss_pred ceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCc----ccEEE--EeCCCcccc
Q 006072 253 EEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGT----EDYVS--YLHPNSSFG 304 (662)
Q Consensus 253 ~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~----~~~~~--~l~~G~~fG 304 (662)
...+.||-...-.--...++++|.+|+..+.....++. ..... .+++||+|-
T Consensus 38 ~~~i~pg~~~~Ph~h~a~~i~~V~~G~~~~~~v~~~~~~~~~~~~~~~v~l~~Gdv~~ 95 (144)
T PF00190_consen 38 RVLIEPGGLRAPHYHNADEIVYVIEGRGRVGVVGPGGPQEEFRDFSQKVRLKAGDVFV 95 (144)
T ss_dssp EEEEETTEEEEEEEESSEEEEEEEESEEEEEEEETTCSSSEEEEEEEEEEEETTEEEE
T ss_pred eeehhcCCccceeEeeeeEEeeeeccceEEEEEecCCccccceeeeceeeeeccccee
Confidence 33446766655444466799999999998665555441 12223 489999875
No 272
>cd07070 NR_LBD_SF-1 The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily. The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD).
Probab=22.11 E-value=2.9e+02 Score=26.59 Aligned_cols=68 Identities=10% Similarity=0.074 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHHHHHHhhhccHhHHHhhchHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHhccc
Q 006072 184 LGRDIRDQIIGHLRLQYESSYTEASVLQDIPISIRAKISQTLYLPYIEKVPLFKGCSSEFINQIVIRLHE 253 (662)
Q Consensus 184 l~~~l~~~i~~~~~~~~~~~~~~~~~l~~Lp~~L~~~i~~~~~~~~l~~~~~f~~~~~~~~~~l~~~~~~ 253 (662)
-.+.++.++..+++.....+.++.+.+..+..-....+ ....++.+++|+|.+++.+....|....-.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~L--~~~VeWaK~lP~F~~L~~~DQi~LLk~~w~ 81 (237)
T cd07070 14 DEDQVRARILGCLQEPQKSRPDQPAPFGLLCRMADQTF--ISIVDWARRCMVFKELEVADQMTLLQNCWS 81 (237)
T ss_pred CHHHHHHHHHHHHhhhhhccCCcccHHHHHHHHHHHHH--HHHHHHHHhCCChhhCCHHHHHHHHHHHHH
Confidence 33557778877765444333444555555544444333 446678999999999998877777666433
No 273
>PHA03239 envelope glycoprotein M; Provisional
Probab=21.64 E-value=9.8e+02 Score=25.35 Aligned_cols=22 Identities=18% Similarity=0.138 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 006072 51 VKLIAVELYCSHIAACIFYYLA 72 (662)
Q Consensus 51 ~~l~~~~~~~~H~~aC~~~~i~ 72 (662)
...++..+.+.-.++|+|+.+.
T Consensus 262 ~~~v~~ai~~F~vL~iiyliv~ 283 (429)
T PHA03239 262 PKATSGALSMFIVLGIIYLMMA 283 (429)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444455667776665
No 274
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=21.57 E-value=28 Score=37.60 Aligned_cols=60 Identities=28% Similarity=0.382 Sum_probs=39.2
Q ss_pred HHHhCcHHHHHHHHHCCCCCCCCCCCCCChHHHHHHcCCHHHHHHHHhccccccccCCCC
Q 006072 517 AASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHG 576 (662)
Q Consensus 517 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 576 (662)
|+..+....+-.|++.|+.++..|..|.+|+|+++..|..++.+.++....+.......+
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~ 462 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNG 462 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcccccc
Confidence 444455555566667777777777777778777777777777777766555444443333
No 275
>COG1226 Kch Kef-type K+ transport systems, predicted NAD-binding component [Inorganic ion transport and metabolism]
Probab=21.36 E-value=52 Score=30.28 Aligned_cols=41 Identities=17% Similarity=0.155 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhcccCCCcccCChhhHHHHHHHHHHHHHHH
Q 006072 108 ITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILG 148 (662)
Q Consensus 108 ~~s~yw~~~t~ttvGygdi~p~~~~e~~~~i~~~~~g~~~~ 148 (662)
..+.||+..+++++|||++.+.+..........++.+....
T Consensus 119 ~~~~~~~~~~l~~~G~~~vi~~~~~~~~~~~~~~~~~~~~~ 159 (212)
T COG1226 119 ARDLDEAVETLTTVGADEVVPPTFESALLLARAALVGLGGD 159 (212)
T ss_pred eccchHHHHHHHHcCCCeeecHHHHHHHHHHHHHhcccCCc
Confidence 44778999999999999988887655555444444444333
No 276
>COG5559 Uncharacterized conserved small protein [Function unknown]
Probab=21.31 E-value=1.1e+02 Score=21.69 Aligned_cols=23 Identities=13% Similarity=0.365 Sum_probs=19.7
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhh
Q 006072 181 RNRLGRDIRDQIIGHLRLQYESS 203 (662)
Q Consensus 181 ~~~l~~~l~~~i~~~~~~~~~~~ 203 (662)
..++|.+|++.+.+|.+|..++.
T Consensus 8 fqkLPDdLKrEvldY~EfLlek~ 30 (65)
T COG5559 8 FQKLPDDLKREVLDYIEFLLEKK 30 (65)
T ss_pred HHHCcHHHHHHHHHHHHHHHHHH
Confidence 35799999999999999987655
No 277
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.30 E-value=7.1e+02 Score=26.47 Aligned_cols=44 Identities=18% Similarity=0.316 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCceEEeeccCCCCCcchhhccchHHHHHHHHHHHHH
Q 006072 60 CSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVV 116 (662)
Q Consensus 60 ~~H~~aC~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~ 116 (662)
.+--.+|.++.+.. ++..|.|-+-..... .-..-|.+|+||-..
T Consensus 500 vcvTIv~TYFlLna----EDyrW~WtSfls~~S---------T~~yvy~Ys~yYy~~ 543 (593)
T KOG1277|consen 500 VCVTIVLTYFLLNA----EDYRWWWTSFLSAGS---------TALYVYLYSFYYYFF 543 (593)
T ss_pred HHHHHHHhHhhhcc----ccceeeeeeeecccc---------ceeehhhhHHHHHhh
Confidence 33445677776653 334556643222111 112357788887654
No 278
>COG3718 IolB Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism]
Probab=21.14 E-value=2.6e+02 Score=26.51 Aligned_cols=66 Identities=17% Similarity=0.202 Sum_probs=40.3
Q ss_pred ccceeccCCCeEEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccch----hhhcc---------CCccce
Q 006072 251 LHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV----SILCN---------IPQPYT 317 (662)
Q Consensus 251 ~~~~~~~~ge~I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~----~~l~~---------~~~~~~ 317 (662)
++...+.+|+..-.+-.......+++.|++.+.. .|+.||++ +.|.+ ..+.++
T Consensus 31 F~~~~L~~Ges~~~~~~~~E~clV~v~Gk~~vs~--------------~g~~f~~iG~R~SvFe~~p~~~vYvp~g~~~~ 96 (270)
T COG3718 31 FRLLRLAAGESATEETGDRERCLVLVTGKATVSA--------------HGSTFGEIGTRMSVFERKPPDSVYVPAGSAFS 96 (270)
T ss_pred EEEEEccCCCcccccCCCceEEEEEEeeeEEEee--------------ccchHhhcccccccccCCCCCeEEecCCceEE
Confidence 3445677777765554444456667899887653 23334332 23333 346788
Q ss_pred EEEccceeEEEec
Q 006072 318 VQVCELCRLLRID 330 (662)
Q Consensus 318 ~~a~~~~~l~~l~ 330 (662)
+.|.+++++...+
T Consensus 97 vtA~t~~~vAvC~ 109 (270)
T COG3718 97 VTATTDLEVAVCS 109 (270)
T ss_pred EEeecceEEEEEe
Confidence 9999998877654
No 279
>PRK10750 potassium transporter; Provisional
Probab=20.80 E-value=1e+03 Score=25.84 Aligned_cols=94 Identities=11% Similarity=0.066 Sum_probs=0.0
Q ss_pred HHHHHHHhHHHHHHHHHHHh------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceEEeecc
Q 006072 22 IRLYRVRKVSQFFHKMEKDI------------RINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLK 89 (662)
Q Consensus 22 ~rllRl~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~H~~aC~~~~i~~~~~~~~~~~~w~~~~~ 89 (662)
+|+.|+.=+.+.....-+.. +..-.-..+.+.+.++++.+-.+...+..+.....+
T Consensus 354 IKv~R~~vl~~~~~~~l~~~~~P~~V~~v~~~gr~i~~~~v~~v~~~~~ly~~~~~~~~~~l~~~g~~------------ 421 (483)
T PRK10750 354 LKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIATGVD------------ 421 (483)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceeeeeECCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc------------
Q ss_pred CCCCCcchhhccchHHHHHHHHHHHHHHhhccc--CCCc----ccCChhhHHHHHHHHHHH
Q 006072 90 MGDYSYADFREIGFWKSYITSMYASVVTMTTVG--YGDV----HAVNLREMVFIMIYVSFD 144 (662)
Q Consensus 90 ~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~ttvG--ygdi----~p~~~~e~~~~i~~~~~g 144 (662)
...|+.-++.++++|| .|.. ...++..+++.++.|++|
T Consensus 422 -----------------~~sA~~~v~s~l~nvG~s~G~~~~~f~~l~~~~K~il~~~MllG 465 (483)
T PRK10750 422 -----------------DFSAFASVVATLNNLGPGLGVVADNFTSMNPVAKWILIANMLFG 465 (483)
T ss_pred -----------------HHHHHHHHHHHhcCCCCCchhhccccccCCHHHHHHHHHHHHHH
No 280
>PRK05482 potassium-transporting ATPase subunit A; Provisional
Probab=20.74 E-value=1.7e+02 Score=32.09 Aligned_cols=43 Identities=9% Similarity=0.157 Sum_probs=31.4
Q ss_pred chHHHHHHHHHHHHHHhhccc-CCCc-ccCChhhHHHHHHHHHHH
Q 006072 102 GFWKSYITSMYASVVTMTTVG-YGDV-HAVNLREMVFIMIYVSFD 144 (662)
Q Consensus 102 ~~~~~Y~~s~yw~~~t~ttvG-ygdi-~p~~~~e~~~~i~~~~~g 144 (662)
..+-.-..|+|-+++|-||.| +..+ ...++....+.++.|++|
T Consensus 324 ~RfG~~~salF~svTtrtTaG~fNsm~dsltp~~~lv~m~lMfIG 368 (559)
T PRK05482 324 VRFGIAASALFAVVTTAASTGAVNAMHDSLTPLGGLVPLLNMQLG 368 (559)
T ss_pred hhhhhHHHHHHHHHHhhhhcchHHHHHHhhccHHHHHHHHHHHhC
Confidence 345567889998888887888 4443 334666678899999997
No 281
>PF02285 COX8: Cytochrome oxidase c subunit VIII; InterPro: IPR003205 Cytochrome c oxidase (1.9.3.1 from EC) is an oligomeric enzymatic complex which is a component of the respiratory chain complex and is involved in the transfer of electrons from cytochrome c to oxygen []. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. In eukaryotes, in addition to the three large subunits, I, II and III, that form the catalytic centre of the enzyme complex, there are a variable number of small polypeptidic subunits.This family is composed of cytochrome c oxidase subunit VIII. ; GO: 0004129 cytochrome-c oxidase activity; PDB: 3AG3_Z 3ABM_M 1OCC_Z 3ASO_Z 3AG2_Z 3ABL_M 3AG4_M 3AG1_M 3ASN_M 1OCZ_M ....
Probab=20.59 E-value=2.6e+02 Score=18.85 Aligned_cols=30 Identities=3% Similarity=0.121 Sum_probs=19.8
Q ss_pred cCChhhHHHHHHHHHHHHHHH-HHHHHHHHH
Q 006072 128 AVNLREMVFIMIYVSFDMILG-AYLIGNMTA 157 (662)
Q Consensus 128 p~~~~e~~~~i~~~~~g~~~~-~~~i~~i~~ 157 (662)
|.+..|+.+.+.+++++++.- +++++++-.
T Consensus 9 ~~s~~e~aigltv~f~~~L~PagWVLshL~~ 39 (44)
T PF02285_consen 9 PLSPAEQAIGLTVCFVTFLGPAGWVLSHLES 39 (44)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 567889998888888777666 467765543
No 282
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=20.53 E-value=74 Score=29.10 Aligned_cols=42 Identities=24% Similarity=0.175 Sum_probs=21.4
Q ss_pred CcHHHHHHHhCcHHHHH-HHHHCCCC----CCCCCCCCCChHHHHHH
Q 006072 511 RTPLHVAASEGLYLMAK-LLVEAGAS----VFPKDRWGNTPLDEGRM 552 (662)
Q Consensus 511 ~t~L~~A~~~~~~~~v~-~Ll~~ga~----~~~~d~~g~tpl~~A~~ 552 (662)
..|||.|+.-+..+++- ++++..+. +|..|.+|-.+|++|..
T Consensus 223 e~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~ 269 (280)
T KOG4591|consen 223 ENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALC 269 (280)
T ss_pred cchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHH
Confidence 34566666555555443 23333332 34555566666666543
No 283
>PHA03048 IMV membrane protein; Provisional
Probab=20.42 E-value=4.3e+02 Score=20.79 Aligned_cols=15 Identities=27% Similarity=0.530 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHhc
Q 006072 60 CSHIAACIFYYLATT 74 (662)
Q Consensus 60 ~~H~~aC~~~~i~~~ 74 (662)
+....||++.++...
T Consensus 20 iLL~~aCIfAfidfs 34 (93)
T PHA03048 20 ILLAASCIFAFVDFS 34 (93)
T ss_pred HHHHHHHHHhhhhhh
Confidence 334579998888654
No 284
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=20.31 E-value=5.5e+02 Score=21.93 Aligned_cols=27 Identities=7% Similarity=0.284 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHH
Q 006072 166 EKFRDKMTDLMKYINRNRLGRDIRDQIIGHLRL 198 (662)
Q Consensus 166 ~~~~~~~~~~~~~m~~~~l~~~l~~~i~~~~~~ 198 (662)
.+.++.++....-+. .-++.|.+||..
T Consensus 28 ~~l~~eL~~~k~el~------~yk~~V~~HF~~ 54 (128)
T PF06295_consen 28 AKLEQELEQAKQELE------QYKQEVNDHFAQ 54 (128)
T ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 344445544443333 224556666554
No 285
>COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=20.15 E-value=1.4e+02 Score=26.31 Aligned_cols=39 Identities=21% Similarity=0.254 Sum_probs=27.3
Q ss_pred EEecCCccCeEEEEEeCEEEEEeeecCCcccEEEEeCCCccccch
Q 006072 262 IMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV 306 (662)
Q Consensus 262 I~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~l~~G~~fGe~ 306 (662)
..+.-...+++++|++|+..+.. ++.+ ..+.+||+.|--
T Consensus 57 ~~H~Hs~edEfv~ILeGE~~l~~---d~~e---~~lrpGD~~gFp 95 (161)
T COG3837 57 LRHWHSAEDEFVYILEGEGTLRE---DGGE---TRLRPGDSAGFP 95 (161)
T ss_pred cccccccCceEEEEEcCceEEEE---CCee---EEecCCceeecc
Confidence 34444556799999999988764 3333 458999988753
Done!