Query 006073
Match_columns 662
No_of_seqs 363 out of 2256
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 15:14:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006073.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006073hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2iwxa1 d.122.1.1 (A:2-214) HS 99.9 9.7E-24 7.1E-28 209.0 10.2 171 144-323 6-205 (213)
2 d1uyla_ d.122.1.1 (A:) HSP90 { 99.9 1.3E-23 9.5E-28 207.5 10.3 165 150-323 12-203 (208)
3 d2gqpa1 d.122.1.1 (A:74-337) H 99.9 6E-23 4.4E-27 205.1 9.3 168 145-323 5-207 (227)
4 d1b63a2 d.122.1.2 (A:-2-216) D 99.5 2E-14 1.5E-18 141.9 10.5 143 141-295 2-150 (218)
5 d1h7sa2 d.122.1.2 (A:29-231) D 99.4 2.6E-13 1.9E-17 132.3 9.3 124 160-295 4-132 (203)
6 d2hkja3 d.122.1.2 (A:10-228) T 99.1 1.9E-10 1.4E-14 112.6 12.5 98 162-263 22-129 (219)
7 d1bxda_ d.122.1.3 (A:) Histidi 98.0 4E-06 2.9E-10 77.5 6.5 87 163-259 48-138 (161)
8 d1pvga2 d.122.1.2 (A:7-245) DN 97.9 2.1E-05 1.5E-09 77.5 11.0 86 163-257 54-155 (239)
9 d1kija2 d.122.1.2 (A:9-220) DN 97.8 2.6E-05 1.9E-09 75.3 8.5 121 163-297 27-165 (212)
10 d1id0a_ d.122.1.3 (A:) Histidi 97.7 2.1E-05 1.5E-09 71.4 7.0 84 163-257 45-131 (146)
11 d1ysra1 d.122.1.3 (A:299-446) 97.7 2.1E-05 1.6E-09 71.4 7.0 85 163-258 45-134 (148)
12 d1gkza2 d.122.1.4 (A:186-378) 97.6 1.7E-05 1.3E-09 74.4 4.7 58 163-226 54-121 (193)
13 d1ei1a2 d.122.1.2 (A:2-220) DN 97.6 4.3E-05 3.1E-09 74.3 7.2 139 142-297 15-171 (219)
14 d1jm6a2 d.122.1.4 (A:1177-1366 97.6 3.6E-05 2.6E-09 72.7 6.4 90 163-258 61-166 (190)
15 d2c2aa2 d.122.1.3 (A:321-481) 97.5 4.7E-05 3.4E-09 69.9 5.8 89 163-259 50-147 (161)
16 d1s14a_ d.122.1.2 (A:) Topoiso 97.4 8.7E-05 6.4E-09 69.3 6.6 140 166-345 9-158 (168)
17 d1y8oa2 d.122.1.4 (A:177-301) 97.4 0.0001 7.4E-09 63.1 5.8 49 165-219 67-125 (125)
18 d1ixma_ d.123.1.1 (A:) Sporula 96.9 0.00019 1.4E-08 63.6 2.7 58 163-224 98-159 (179)
19 d1th8a_ d.122.1.3 (A:) Anti-si 96.8 0.00058 4.2E-08 60.9 5.8 83 163-259 40-127 (139)
20 d1r62a_ d.122.1.3 (A:) Nitroge 96.5 0.00018 1.3E-08 65.4 -0.6 87 163-258 45-143 (156)
21 d1we9a_ g.50.1.2 (A:) PHD fing 85.8 0.1 7.3E-06 39.9 0.9 35 549-583 17-54 (64)
22 d1weea_ g.50.1.2 (A:) PHD fing 82.5 0.25 1.8E-05 38.5 2.0 32 551-582 28-61 (72)
23 d1wepa_ g.50.1.2 (A:) PHD fing 69.6 0.52 3.8E-05 37.4 0.4 35 549-583 22-59 (79)
24 d1wema_ g.50.1.2 (A:) Death as 57.6 1 7.4E-05 35.0 -0.0 33 551-583 27-66 (76)
25 d1mm2a_ g.50.1.2 (A:) Mi2-beta 52.8 2.7 0.0002 31.3 1.8 33 551-583 18-52 (61)
26 d1f62a_ g.50.1.2 (A:) Williams 30.2 4.5 0.00033 28.7 -0.3 30 552-583 13-46 (51)
27 d1weva_ g.50.1.2 (A:) PHD fing 27.9 14 0.001 28.9 2.4 33 551-583 30-68 (88)
28 d1wewa_ g.50.1.2 (A:) Sumoylat 25.7 7.4 0.00054 30.1 0.2 31 553-583 31-68 (78)
No 1
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89 E-value=9.7e-24 Score=209.02 Aligned_cols=171 Identities=22% Similarity=0.289 Sum_probs=128.6
Q ss_pred eeecCH-HHHHHhhcccccCHHHHHHHHHhcccccCC----------------CccEEEEEecccccCCCCCCEEEEEeC
Q 006073 144 FVRADP-SYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDD 206 (662)
Q Consensus 144 ~~~v~p-~~L~slsts~~~~~f~AIaELIdNA~DA~A----------------t~V~I~I~~~~~~~~~~~~~~L~I~DN 206 (662)
.|+++. .+|+.++.++|+.+..+|+|||+||.||.+ ..+.|.+.. +.+...|+|.||
T Consensus 6 ~Fqae~~~ll~ll~~~lYs~~~iflRELiqNa~DA~~~~~~~~~~~~~~~~~~~~~~I~i~~------d~~~~~l~i~Dn 79 (213)
T d2iwxa1 6 EFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITP------KPEQKVLEIRDS 79 (213)
T ss_dssp ECCHHHHHHHHHHHHCCCSCTTHHHHHHHHHHHHHHHHHHHHTTTCGGGGTTSCCCCEEEEE------EGGGTEEEEEEC
T ss_pred eehhhHHHHHHHHHHhhcCCchHHHHHHHHhHHHHHHHHHHhhccCcccccCCccccccccc------ccccceeEEecC
Confidence 455554 477888888889999999999999999942 234455442 234689999999
Q ss_pred CCCCCHHHHHHHh-hcccCCCC--------CCCCCcccccCceeeeeccccCCeEEEEEeeCCCCceeEEEeeecCCCcc
Q 006073 207 GHGMTHQDVVRMT-YFGHKQPD--------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDN 277 (662)
Q Consensus 207 G~GMt~eel~~~l-~fG~s~k~--------~~~~~~IG~fGiGfKsA~~~lg~~v~V~Sk~~g~~s~~~ls~sf~~g~~~ 277 (662)
|.||+.+++.+.| .+|.|.+. ..+...||||||||+|++| ++++|.|+||+.+.....++|.. .+...
T Consensus 80 GiGMt~~~~~~~l~~ia~S~~~~~~~~~~~~~~~~~IGqFGIGfyS~Fm-vad~v~V~trs~~~~~~~~~~~~--~~~~~ 156 (213)
T d2iwxa1 80 GIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFL-VADRVQVISKSNDDEQYIWESNA--GGSFT 156 (213)
T ss_dssp SSCCCHHHHHHHHTTCCCSTHHHHHHHHHHTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTSCCEEEEECS--SSEEE
T ss_pred CccccHHHHHHHHhhhhcccchHHHhhhhhhhhhhhhcccccchhhhhh-hccceeEEeecCCcccceeeEec--CCCcE
Confidence 9999999998876 47877542 2346789999999998888 99999999999887655555432 22223
Q ss_pred EEE-cCcccCCCCcEEEEEecccc-hhhhhhhhhh-hhhcCCCchhhHH
Q 006073 278 LEI-PIVSYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG 323 (662)
Q Consensus 278 i~V-P~~~~~~~Gt~I~l~~~~~~-e~~~~~~L~~-I~kySpF~s~~I~ 323 (662)
+.. .......+||.|+|+++++. +++.++.++. |.+||.|..+||+
T Consensus 157 ~~~~~~~~~~~~GT~I~L~lk~d~~efle~~rlk~iIkkYS~fI~~PI~ 205 (213)
T d2iwxa1 157 VTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQ 205 (213)
T ss_dssp EEECSSSCCCSSEEEEEEEECTTCGGGGCHHHHHHHHHHHCCCCSSCEE
T ss_pred EEEEeccCCCCCcEEEEEEeCccHHHhcCHHHHHHHHHHHhcCcCcCeE
Confidence 332 22233457999999998765 6778888864 9999999999885
No 2
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.3e-23 Score=207.48 Aligned_cols=165 Identities=24% Similarity=0.310 Sum_probs=125.9
Q ss_pred HHHHHhhcccccCHHHHHHHHHhcccccCC----------------CccEEEEEecccccCCCCCCEEEEEeCCCCCCHH
Q 006073 150 SYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQ 213 (662)
Q Consensus 150 ~~L~slsts~~~~~f~AIaELIdNA~DA~A----------------t~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~e 213 (662)
..|+.+..+.|+.+..+|+|||+||.||.. ....|.|.. +.+...|+|.|||.||+.+
T Consensus 12 ~ll~ll~~slYs~~~iflRELIqNa~DA~~k~~~~~~~~~~~~~~~~~~~i~i~~------d~~~~~l~I~DnGiGMt~~ 85 (208)
T d1uyla_ 12 QLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIP------NKQDRTLTIVDTGIGMTKA 85 (208)
T ss_dssp HHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEE------ETTTTEEEEEECSCCCCHH
T ss_pred HHHHHHHHhhcCCchHhHHHHHhhHHHHHHHHHHHhcCCchhccCCcccceEEee------cCCccEEEEEcCCccccHH
Confidence 466777888888888999999999999931 334455542 2457899999999999999
Q ss_pred HHHHHhh-cccCCC--------CCCCCCcccccCceeeeeccccCCeEEEEEeeCCCCceeEEEeeecCCCccEEEcCcc
Q 006073 214 DVVRMTY-FGHKQP--------DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVS 284 (662)
Q Consensus 214 el~~~l~-fG~s~k--------~~~~~~~IG~fGiGfKsA~~~lg~~v~V~Sk~~g~~s~~~ls~sf~~g~~~i~VP~~~ 284 (662)
++.+.++ +|.|.+ ...+...||||||||+|++| +++++.|.||+.+.....++|.. .+...+..+...
T Consensus 86 el~~~LgtIa~Sg~~~f~~~~~~~~~~~~IGqFGVGFyS~Fm-Vad~v~V~sk~~~~~~~~~~~~~--~~~~~~~~~~~~ 162 (208)
T d1uyla_ 86 DLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVTVITKHNDDEQYAWESSA--GGSFTVRTDTGE 162 (208)
T ss_dssp HHHTGGGSCHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTSCCEEEEECS--TTEEEEEECCSS
T ss_pred HHHhhcccccccchHHHHHhhhhccchhhhhhcccceEEeee-ccCceEEEEecCCcchheeeecc--CCCceEEecccc
Confidence 9998764 555432 12356799999999999988 99999999998887655555543 333445555445
Q ss_pred cCCCCcEEEEEecccc-hhhhhhhhhh-hhhcCCCchhhHH
Q 006073 285 YYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG 323 (662)
Q Consensus 285 ~~~~Gt~I~l~~~~~~-e~~~~~~L~~-I~kySpF~s~~I~ 323 (662)
...+||.|+|+++++. +++.++.++. |.+||.|..+||.
T Consensus 163 ~~~~GT~I~L~lk~d~~efl~~~~i~~likkys~fi~~PI~ 203 (208)
T d1uyla_ 163 PMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPIT 203 (208)
T ss_dssp CCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCSSCEE
T ss_pred cCCCCcEEEEEeCCChHHHcCHHHHHHHHHHHhcccCcCeE
Confidence 5568999999998875 6777888875 9999999998885
No 3
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=99.87 E-value=6e-23 Score=205.07 Aligned_cols=168 Identities=20% Similarity=0.302 Sum_probs=123.7
Q ss_pred eecC-HHHHHHhhcccccCHHHHHHHHHhcccccC----------------CCccEEEEEecccccCCCCCCEEEEEeCC
Q 006073 145 VRAD-PSYLQTLGQAHSGWIFGAIAELVDNSRDAK----------------ATKLEISIESIYFKKAGKDIPMLSIIDDG 207 (662)
Q Consensus 145 ~~v~-p~~L~slsts~~~~~f~AIaELIdNA~DA~----------------At~V~I~I~~~~~~~~~~~~~~L~I~DNG 207 (662)
|+++ ...|+.++.++|+.+..+|+|||+||.||. ...+.|.+.. +.+...|+|.|||
T Consensus 5 Fq~e~~~ll~ll~~sLYs~~~iflRELiqNA~DA~~k~r~~~~~~~~~~~~~~~~~i~i~~------d~~~~~l~i~DnG 78 (227)
T d2gqpa1 5 FQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKC------DKEKNLLHVTDTG 78 (227)
T ss_dssp CCHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEE------ETTTTEEEEEECS
T ss_pred eehhHHHHHHHHHhcccCCCchhHHHHHhhHHHHHHHHHHHhccCcccccccchhhhhccc------CCCCcEEEEEecC
Confidence 3444 456677788888899999999999999992 1234444432 2457899999999
Q ss_pred CCCCHHHHHHHhh-cccCCCC-------------CCCCCcccccCceeeeeccccCCeEEEEEeeCCCCceeEEEeeecC
Q 006073 208 HGMTHQDVVRMTY-FGHKQPD-------------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQ 273 (662)
Q Consensus 208 ~GMt~eel~~~l~-fG~s~k~-------------~~~~~~IG~fGiGfKsA~~~lg~~v~V~Sk~~g~~s~~~ls~sf~~ 273 (662)
.||+++++.+.++ +|.|... ..+...||||||||+|++| ++++|.|.|++.+.. +..|.+ .
T Consensus 79 iGMt~~e~~~~lgtIa~Sgt~~f~~~~~~~~~~~~~~~~~IGqFGvGfyS~Fm-Vad~V~v~s~~~~~~--~~~W~s--~ 153 (227)
T d2gqpa1 79 VGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFL-VADKVIVTSKHNNDT--QHIWES--D 153 (227)
T ss_dssp CCCCHHHHHHHHHCC---------------------CHHHHHHTTCGGGGGGG-TEEEEEEEEECTTSC--CEEEEE--S
T ss_pred ccccHHHHHHHHHHHhhcchHHHHHhhhhcccccccchhhhhhcCcceeEEEe-eeeeEEEEEeccCCc--ccEEEe--c
Confidence 9999999999875 5554321 1123469999999999988 999999999987753 456665 4
Q ss_pred CCccEEEcCc--ccCCCCcEEEEEecccc-hhhhhhhhhh-hhhcCCCchhhHH
Q 006073 274 GKDNLEIPIV--SYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG 323 (662)
Q Consensus 274 g~~~i~VP~~--~~~~~Gt~I~l~~~~~~-e~~~~~~L~~-I~kySpF~s~~I~ 323 (662)
+...+++... ....+||+|+|+++++. +++.++.++. |.+||.|..+||.
T Consensus 154 g~~~~~i~~~~~~~~~rGT~I~L~Lk~d~~efl~~~rl~~iIkkYs~fI~~PI~ 207 (227)
T d2gqpa1 154 SNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIY 207 (227)
T ss_dssp SSCEEEEECTTCSCSSSEEEEEEEECGGGGGGGCHHHHHHHHHHHHTTCSSCEE
T ss_pred CCCceecccccccccccceEEEEEecccchhhcCHHHHHHHHHHHhcCCCCCeE
Confidence 5566776543 34457999999999765 6788888875 8999999999885
No 4
>d1b63a2 d.122.1.2 (A:-2-216) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]}
Probab=99.50 E-value=2e-14 Score=141.92 Aligned_cols=143 Identities=20% Similarity=0.256 Sum_probs=97.5
Q ss_pred CceeeecCHHHHHHh-hcccccCHHHHHHHHHhcccccCCCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHh
Q 006073 141 EKNFVRADPSYLQTL-GQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMT 219 (662)
Q Consensus 141 ~~~~~~v~p~~L~sl-sts~~~~~f~AIaELIdNA~DA~At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l 219 (662)
.|.+..++++.++++ +...+.+|..||+|||+||+||||++|.|.+. ..+...|.|.|||.||+++|+..+.
T Consensus 2 ~m~I~~L~~~~~~~i~ag~vi~~~~~~vkELveNsiDA~At~I~V~i~-------~~g~~~i~V~DnG~Gi~~~d~~~~~ 74 (218)
T d1b63a2 2 HMPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIE-------RGGAKLIRIRDNGCGIKKDELALAL 74 (218)
T ss_dssp CSCCCCCCHHHHHHHHHHHHCSSHHHHHHHHHHHHHHTTCSEEEEEEE-------GGGTSEEEEEECSCCCCGGGHHHHH
T ss_pred CCcceECCHHHHHHhCCcCEEecHHHHHHHHHhhhhcCCCCEEEEEEE-------cCCccEEEEeeCCCCcCHHHHHhhH
Confidence 467889999999999 55666899999999999999999999999997 3456789999999999999998876
Q ss_pred h-cccCCCCC-CCCCcccccCceeeee---ccccCCeEEEEEeeCCCCceeEEEeeecCCCccEEEcCcccCCCCcEEEE
Q 006073 220 Y-FGHKQPDA-DDPNRIGRFGVGFKTG---AMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRKGQFMEL 294 (662)
Q Consensus 220 ~-fG~s~k~~-~~~~~IG~fGiGfKsA---~~~lg~~v~V~Sk~~g~~s~~~ls~sf~~g~~~i~VP~~~~~~~Gt~I~l 294 (662)
. +.+|.-.. ++...+. .+||+.. ++....++.|.|++.+... ++.- .+..+.....+. +.....||+|++
T Consensus 75 ~r~~TSKi~~~~dl~~~~--t~GFRGEAL~Si~~vs~l~I~s~~~~~~~-~~~~-~~~~~~~~~~~~-~~~~~~GTtV~V 149 (218)
T d1b63a2 75 ARHATSKIASLDDLEAII--SLGFRGEALASISSVSRLTLTSRTAEQQE-AWQA-YAEGRDMNVTVK-PAAHPVGTTLEV 149 (218)
T ss_dssp STTCCSSCCSHHHHHTCC--SSCCSSCHHHHHHTTSEEEEEEECTTCSS-EEEE-EEETTTTEEEEE-EECCCSEEEEEE
T ss_pred hccccccccchhhcchhh--hhccchhHHHHhhhcCceEEeeecCCCCc-eEEE-EEEeccccceee-ecccCCccEEEE
Confidence 4 44443221 1222333 3356543 3445688999999988643 3221 111222222221 112346998876
Q ss_pred E
Q 006073 295 D 295 (662)
Q Consensus 295 ~ 295 (662)
.
T Consensus 150 ~ 150 (218)
T d1b63a2 150 L 150 (218)
T ss_dssp E
T ss_pred E
Confidence 4
No 5
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=2.6e-13 Score=132.33 Aligned_cols=124 Identities=18% Similarity=0.240 Sum_probs=77.6
Q ss_pred ccCHHHHHHHHHhcccccCCCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhh-cccCCCC-CCCCCc---c
Q 006073 160 SGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPD-ADDPNR---I 234 (662)
Q Consensus 160 ~~~~f~AIaELIdNA~DA~At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~-fG~s~k~-~~~~~~---I 234 (662)
+.+|.+||+|||+||+||+|++|.|.+.. .+...|.|.|||.||++++|..++. +.++... .++... .
T Consensus 4 i~~~~~~v~ELi~NsiDA~At~I~i~i~~-------~g~~~i~V~DnG~Gi~~~dl~~~~~~~~tsk~~~~~~~~~~~t~ 76 (203)
T d1h7sa2 4 VLSLSTAVKELVENSLDAGATNIDLKLKD-------YGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETF 76 (203)
T ss_dssp ECCHHHHHHHHHHHHHHTTCSEEEEEEEG-------GGTSEEEEEECSCCCCGGGSGGGGC----------CCTTCSEEE
T ss_pred EecHHHHHHHHHHHHHcCCCCEEEEEEEc-------CCEEEEEEeeCCcccCHHHhhhhhhheeeccccccccccccccc
Confidence 46899999999999999999999999962 3456899999999999999987654 3333321 122222 3
Q ss_pred cccCceeeeeccccCCeEEEEEeeCCCCceeEEEeeecCCCccEEEcCcccCCCCcEEEEE
Q 006073 235 GRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRKGQFMELD 295 (662)
Q Consensus 235 G~fGiGfKsA~~~lg~~v~V~Sk~~g~~s~~~ls~sf~~g~~~i~VP~~~~~~~Gt~I~l~ 295 (662)
|.-|.++ +++....+++|.|++.+......+ .|..+.....+ .+.-..+||+|++.
T Consensus 77 GfrGeaL--~si~~~s~~~i~s~~~~~~~~~~i--~~~~~g~~~~~-~~~~~~~GTtV~v~ 132 (203)
T d1h7sa2 77 GFRGEAL--SSLCALSDVTISTCHASAKVGTRL--MFDHNGKIIQK-TPYPRPRGTTVSVQ 132 (203)
T ss_dssp SSSSSHH--HHHHHHSEEEEEEECTTCSSCEEE--EECTTSCEEEE-EECCCCSEEEEEEE
T ss_pred Cccchhh--hhhhhccceEEEeecCCCchhEEE--EEeccCceeee-eecccccceEEEee
Confidence 3333333 233445679999999886432222 23222222222 12223479999874
No 6
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]}
Probab=99.10 E-value=1.9e-10 Score=112.60 Aligned_cols=98 Identities=22% Similarity=0.362 Sum_probs=71.5
Q ss_pred CHHHHHHHHHhcccccCCC-----ccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhh-cccCCCCCCCCCccc
Q 006073 162 WIFGAIAELVDNSRDAKAT-----KLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIG 235 (662)
Q Consensus 162 ~~f~AIaELIdNA~DA~At-----~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~-fG~s~k~~~~~~~IG 235 (662)
.+..||+|||+||+||.++ .+.|.+.... .+.+...|.|.|||.||+++++.+++. |.++.+. ......|
T Consensus 22 ~L~~~l~eLi~Naida~~~~~~~~~i~i~i~~~~---~~~~~~~i~V~DnG~Gi~~~~~~~~f~~~~~s~~~-~~~~~~G 97 (219)
T d2hkja3 22 ALYQTVRELIENSLDATDVHGILPNIKITIDLID---DARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKY-VNRQTRG 97 (219)
T ss_dssp HHHHHHHHHHHHHHHTTGGGTCCCEEEEEEEEEE---TTTTEEEEEEEECSCCCCGGGHHHHHHCCCSSCCC-CCSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcceEEEEEEEec---CCCCEEEEEEEcCCCCCCHHHHHhhccceEecccc-ccccccC
Confidence 3778999999999999764 4555554321 123345789999999999999999885 6555442 3456789
Q ss_pred ccCceeeeecc----ccCCeEEEEEeeCCCCc
Q 006073 236 RFGVGFKTGAM----RLGKDALVLTQTADSRS 263 (662)
Q Consensus 236 ~fGiGfKsA~~----~lg~~v~V~Sk~~g~~s 263 (662)
.+|+||..+.. ..|..+.|.|+..+...
T Consensus 98 ~~GlGl~~~~~~s~~~~g~~i~V~S~~~~~~~ 129 (219)
T d2hkja3 98 MYGLGVKAAVLYSQMHQDKPIEIETSPVNSKR 129 (219)
T ss_dssp SCTTTHHHHHHHHHHHCCCCEEEEEECTTCSE
T ss_pred ccCHHHHHHHHHHHHcCCcEEEEEEEecCCCc
Confidence 99999976543 34667999999887644
No 7
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]}
Probab=97.97 E-value=4e-06 Score=77.55 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=61.6
Q ss_pred HHHHHHHHHhcccccCCCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhh-cccCCCCCCCCCcccccCcee
Q 006073 163 IFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGRFGVGF 241 (662)
Q Consensus 163 ~f~AIaELIdNA~DA~At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~-fG~s~k~~~~~~~IG~fGiGf 241 (662)
+..+|..||+||+.+....|.|.+.. ..+.-.|.|.|||.||+++++.++|. |-.... ....+..|+|+
T Consensus 48 l~~vl~NLi~NAik~~~~~i~i~~~~------~~~~~~i~V~D~G~GI~~e~~~~iF~~F~r~~~----~~~~~g~GLGL 117 (161)
T d1bxda_ 48 IKRAVANMVVNAARYGNGWIKVSSGT------EPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDS----ARTISGTGLGL 117 (161)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEEEE------ETTEEEEEEEEESSCSCTTGGGCSSCCCCCCSC----CCCCCCCSCCC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEEE------eCCEEEEEEEEcCCCCCHHHHHHHhCCceECCC----CCcCCCCCchH
Confidence 34569999999999987788888764 23456799999999999999999875 433221 12235579998
Q ss_pred eeec---cccCCeEEEEEeeC
Q 006073 242 KTGA---MRLGKDALVLTQTA 259 (662)
Q Consensus 242 KsA~---~~lg~~v~V~Sk~~ 259 (662)
..+- -..|-++.|.|...
T Consensus 118 ~ivk~iv~~hgG~i~v~s~~~ 138 (161)
T d1bxda_ 118 AIVQRIVDNHNGMLELGTSER 138 (161)
T ss_dssp CTTHHHHHHHTSEEEEEEETT
T ss_pred HHHHHHHHHCCCEEEEEEcCC
Confidence 5331 24577788877644
No 8
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.91 E-value=2.1e-05 Score=77.50 Aligned_cols=86 Identities=16% Similarity=0.237 Sum_probs=57.8
Q ss_pred HHHHHHHHHhccccc-----CCCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHH--------HHHhh-cccCCCCC
Q 006073 163 IFGAIAELVDNSRDA-----KATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDV--------VRMTY-FGHKQPDA 228 (662)
Q Consensus 163 ~f~AIaELIdNA~DA-----~At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel--------~~~l~-fG~s~k~~ 228 (662)
+.-.+-|+|+||+|. ..++|.|.|+. +...|+|.|||.||+-+-- +-+|+ +..+.+-.
T Consensus 54 l~ki~dEil~Na~D~~~r~~~~~~I~v~i~~--------~~~si~V~d~GrGIPv~~h~~~~~~~~e~ift~l~ag~nfd 125 (239)
T d1pvga2 54 LFKIFDEILVNAADNKVRDPSMKRIDVNIHA--------EEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 125 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCEEEEEEET--------TTTEEEEEEESSCCCCSBCTTTCSBHHHHHHHSSSEESCCC
T ss_pred ceeecceeeecccchhhhccccceEEEEEeC--------CCCEEEEEecCcceeeeeccccccchhheeeEeeccccccc
Confidence 456689999999995 45778888762 3578999999999986531 11232 22222221
Q ss_pred --CCCCcccccCceeeeeccccCCeEEEEEe
Q 006073 229 --DDPNRIGRFGVGFKTGAMRLGKDALVLTQ 257 (662)
Q Consensus 229 --~~~~~IG~fGiGfKsA~~~lg~~v~V~Sk 257 (662)
......|..|+|.+ +.-.|++.++|.+.
T Consensus 126 ~~~~k~sgGlnGvG~~-vvNalS~~f~vev~ 155 (239)
T d1pvga2 126 DDEKKVTGGRNGYGAK-LCNIFSTEFILETA 155 (239)
T ss_dssp TTSCCCCSCCSSCHHH-HHHHTEEEEEEEEE
T ss_pred cccceeeCCeecccee-ehhhhhHhhheeeE
Confidence 12457899999995 44448888887774
No 9
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]}
Probab=97.75 E-value=2.6e-05 Score=75.34 Aligned_cols=121 Identities=16% Similarity=0.149 Sum_probs=75.2
Q ss_pred HHHHHHHHHhccccc----CCCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHH--------HHhh-cccCCC--C
Q 006073 163 IFGAIAELVDNSRDA----KATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVV--------RMTY-FGHKQP--D 227 (662)
Q Consensus 163 ~f~AIaELIdNA~DA----~At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~--------~~l~-fG~s~k--~ 227 (662)
+.-.+-|+|+||+|. .++.+.|.+.. ...++|.|||.||+-+.-. -+|+ +..+.+ .
T Consensus 27 l~~l~~Eil~Na~De~~~~~~~~i~v~~~~---------dg~i~V~ddG~GIpv~~h~~~~~~~~e~if~~l~~~~~~d~ 97 (212)
T d1kija2 27 YHHLFKEILDNAVDEALAGYATEILVRLNE---------DGSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFEQ 97 (212)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCEEEEEECT---------TSCEEEEECSSCCCCSEETTTTEEHHHHHHHSSCEESGGGG
T ss_pred hhhhhhhhhhhhhhhhhhcCCceEEEEEcC---------CCcEEEEECCcccccccccccCcceEEEEEEEEcccccccC
Confidence 455689999999997 25667666541 3579999999999875311 1222 111121 1
Q ss_pred CCCCCcccccCceeeeeccccCCeEEEEEeeCCCCceeEEEeeecCCCc--cEEEcC-cccCCCCcEEEEEec
Q 006073 228 ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKD--NLEIPI-VSYYRKGQFMELDTV 297 (662)
Q Consensus 228 ~~~~~~IG~fGiGfKsA~~~lg~~v~V~Sk~~g~~s~~~ls~sf~~g~~--~i~VP~-~~~~~~Gt~I~l~~~ 297 (662)
.......|..|+|.+ ++-.++..+.|.+++++. .+.++|..+.. ....+. ......||+|+..++
T Consensus 98 ~~~~~sgG~hGvGa~-vvNalS~~~~v~v~r~~k----~~~~~f~~g~~~~~~~~~~~~~~~~~GT~ItF~PD 165 (212)
T d1kija2 98 GAYKVSGGLHGVGAS-VVNALSEWTVVEVFREGK----HHRIAFSRGEVTEPLRVVGEAPRGKTGTRVTFKPD 165 (212)
T ss_dssp SSCCCCSCSSTTSHH-HHHHTEEEEEEEEEETTE----EEEEEEETTEEEEEEEEEEECGGGCCEEEEEEEEC
T ss_pred CCceecCCCccccce-EEEEeccceEEEEEEecc----eeeeEEeccccCCcceEccccCCCCccEEEEEEEc
Confidence 123567899999995 445589999999998775 34455544321 221221 222346898887654
No 10
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]}
Probab=97.73 E-value=2.1e-05 Score=71.39 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=58.5
Q ss_pred HHHHHHHHHhcccccCCCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhhcccCCCCCCCCCcccccCceee
Q 006073 163 IFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGFK 242 (662)
Q Consensus 163 ~f~AIaELIdNA~DA~At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~fG~s~k~~~~~~~IG~fGiGfK 242 (662)
+..+|..||+||+++....|.|.+.. ..+.-.|.|.|||.||+.+++.+++.-.+..... . +-.|+|+.
T Consensus 45 l~~vl~NLl~NAik~~~~~i~i~~~~------~~~~~~i~V~D~G~Gi~~~~~~~iF~~F~r~~~~--~---~G~GLGL~ 113 (146)
T d1id0a_ 45 FVEVMGNVLDNACKYCLEFVEISARQ------TDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTL--R---PGQGVGLA 113 (146)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEEEE------CSSCEEEEEEESSSCCCGGGTTGGGSCCCCTTCC--C---TTCCSCHH
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEEEe------eCCEEEEEEEeeCCCCCHHHHHHHcCCcccCCCC--C---CCeeHHHH
Confidence 44669999999999998888888874 3445679999999999999999988633322111 1 23688874
Q ss_pred ee---ccccCCeEEEEEe
Q 006073 243 TG---AMRLGKDALVLTQ 257 (662)
Q Consensus 243 sA---~~~lg~~v~V~Sk 257 (662)
-+ .=..|-++.|.|.
T Consensus 114 I~k~iv~~h~G~i~~~s~ 131 (146)
T d1id0a_ 114 VAREITEQYEGKIVAGES 131 (146)
T ss_dssp HHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHcCCEEEEEEc
Confidence 22 1134666666654
No 11
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.73 E-value=2.1e-05 Score=71.42 Aligned_cols=85 Identities=19% Similarity=0.177 Sum_probs=53.0
Q ss_pred HHHHHHHHHhcccccC-CCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhh-cccCCCCCCCCCcccccCce
Q 006073 163 IFGAIAELVDNSRDAK-ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGRFGVG 240 (662)
Q Consensus 163 ~f~AIaELIdNA~DA~-At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~-fG~s~k~~~~~~~IG~fGiG 240 (662)
+..+|..||+||+.++ +..|.|.+.. ..+.-.|.|.|||.||+++++.+++. |-..... ..+-.|+|
T Consensus 45 l~~vl~NLl~NAiky~~~~~I~i~~~~------~~~~~~i~V~D~G~Gi~~~~~~~ife~f~r~~~~-----~~~G~GLG 113 (148)
T d1ysra1 45 LRLAVDNAIANAVKHGGATLVQLSAVS------SRAGVEIAIDDNGSGVPEGERQVVFERFSRGSTA-----SHSGSGLG 113 (148)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEEEE------ETTEEEEEEEESSSCCCGGGHHHHHTSCC----------------CC
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEEEe------cCCEEEEEEEEcCCCCCHHHHHHhcCccccCCCC-----CCCCccHH
Confidence 4567999999999975 4456666553 23456799999999999999999876 3222111 12345888
Q ss_pred eeee---ccccCCeEEEEEee
Q 006073 241 FKTG---AMRLGKDALVLTQT 258 (662)
Q Consensus 241 fKsA---~~~lg~~v~V~Sk~ 258 (662)
+..+ .-..|-++.+.|..
T Consensus 114 L~i~~~iv~~hgG~i~~~s~~ 134 (148)
T d1ysra1 114 LALVAQQAQLHGGTASLENSP 134 (148)
T ss_dssp CHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHcCCEEEEEEcC
Confidence 8532 12456677776654
No 12
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.61 E-value=1.7e-05 Score=74.40 Aligned_cols=58 Identities=22% Similarity=0.343 Sum_probs=44.2
Q ss_pred HHHHHHHHHhcccccC----------CCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhhcccCCC
Q 006073 163 IFGAIAELVDNSRDAK----------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQP 226 (662)
Q Consensus 163 ~f~AIaELIdNA~DA~----------At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~fG~s~k 226 (662)
+..+|..||+||++|. ...|.|.+.. ..+.-.|.|.|||.||+++++.++|...++.+
T Consensus 54 l~qvl~NLl~NAi~~t~~~~~~~~~~~~~I~i~~~~------~~~~v~i~V~D~G~GI~~e~~~~iF~~f~tt~ 121 (193)
T d1gkza2 54 LDYILPELLKNAMRATMESHLDTPYNVPDVVITIAN------NDVDLIIRISDRGGGIAHKDLDRVMDYHFTTA 121 (193)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCTTSCCCEEEEEEE------CSSEEEEEEECCSCCCCTTTTTTTTSTTCCCC
T ss_pred HHHHHHHHHHHHHHhcccCceeeccccceEEEEEEc------cCCEEEEEEecCCCCCCHHHHHHhcCCceecc
Confidence 4467999999999982 2357776653 34566889999999999999999987555544
No 13
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]}
Probab=97.58 E-value=4.3e-05 Score=74.27 Aligned_cols=139 Identities=19% Similarity=0.221 Sum_probs=83.3
Q ss_pred ceeeecCHH-HHHHhhcccccCHHHHHHHHHhccccc----CCCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHH--
Q 006073 142 KNFVRADPS-YLQTLGQAHSGWIFGAIAELVDNSRDA----KATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQD-- 214 (662)
Q Consensus 142 ~~~~~v~p~-~L~slsts~~~~~f~AIaELIdNA~DA----~At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~ee-- 214 (662)
..+++.-|. |+=+.. ....+.--+-|+|+||+|. .++.+.|.+.. ...|+|.|||.||+-+.
T Consensus 15 lE~Vr~RP~mYiGs~~--~~~gl~~l~~Eil~Na~De~~~~~~~~i~v~i~~---------dgsIsV~ddGrGIPv~~h~ 83 (219)
T d1ei1a2 15 LDAVRKRPGMYIGDTD--DGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHA---------DNSVSVQDDGRGIPTGIHP 83 (219)
T ss_dssp THHHHHCTHHHHCCSS--SSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECT---------TSCEEEEECSSCCCCSBCT
T ss_pred hhHHHhCCCcEEccCC--CcccchhhhHhHhhhhhhhhcCCCccceeEEEcC---------CCeEEEEECCccccccccC
Confidence 445555555 442221 1123556689999999996 25666666541 35799999999999753
Q ss_pred ------HHHHhh-cccCCC--CCCCCCcccccCceeeeeccccCCeEEEEEeeCCCCceeEEEeeecCCC--ccEEEcCc
Q 006073 215 ------VVRMTY-FGHKQP--DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGK--DNLEIPIV 283 (662)
Q Consensus 215 ------l~~~l~-fG~s~k--~~~~~~~IG~fGiGfKsA~~~lg~~v~V~Sk~~g~~s~~~ls~sf~~g~--~~i~VP~~ 283 (662)
..-+|+ +..+.+ ..+..-..|..|+|.+ +.-.+++.+.|.+++++. .+.++|..|. .... .+.
T Consensus 84 ~~~~~~~e~if~~l~tg~~fd~~~~~~sgG~nGvG~~-~~NalS~~f~v~~~r~g~----~y~q~f~~g~~~~~~~-~~~ 157 (219)
T d1ei1a2 84 EEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS-VVNALSQKLELVIQREGK----IHRQIYEHGVPQAPLA-VTG 157 (219)
T ss_dssp TTSSBHHHHHHHSTTEESCSSSSSCSSCSCCSSCHHH-HHHHTEEEEEEEEEETTE----EEEEEEETTEESSCCE-EEE
T ss_pred ccCCchhhhhhhhhhhccCCCCCcceeEcCcccccee-EEEEeeeEEEEEEEECCE----EEEEEEeCCeECCCce-ecc
Confidence 233333 222222 1223567799999995 444589999999988765 3455664331 1111 111
Q ss_pred ccCCCCcEEEEEec
Q 006073 284 SYYRKGQFMELDTV 297 (662)
Q Consensus 284 ~~~~~Gt~I~l~~~ 297 (662)
.-...||+|+..+.
T Consensus 158 ~~~~~gT~I~F~PD 171 (219)
T d1ei1a2 158 ETEKTGTMVRFWPS 171 (219)
T ss_dssp ECSCCEEEEEEEEC
T ss_pred CcCCCCEEEEEEEC
Confidence 23457898887664
No 14
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]}
Probab=97.58 E-value=3.6e-05 Score=72.69 Aligned_cols=90 Identities=16% Similarity=0.304 Sum_probs=59.3
Q ss_pred HHHHHHHHHhccccc----C-----CCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhhcccCCCCCC----
Q 006073 163 IFGAIAELVDNSRDA----K-----ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDAD---- 229 (662)
Q Consensus 163 ~f~AIaELIdNA~DA----~-----At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~fG~s~k~~~---- 229 (662)
+..+|.+||+||++| + .+.|.|.+.. ..+.-.|.|.|||.||+++++.++|...++.+...
T Consensus 61 l~qvl~NLl~NA~~~~~~~~~~~~~~~~I~v~~~~------~~~~~~i~V~D~G~GI~~~~~~~iF~~f~~~~~~~~~~~ 134 (190)
T d1jm6a2 61 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVAL------GEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGT 134 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCTTSCCCEEEEEEE------CSSEEEEEEEECSCCCCGGGTTGGGCTTCCCSCCC----
T ss_pred HHHHHHHHHHHHHHHhhccCccccccceEEEEEEe------CCeEEEEEEeccCCCCCHHHHHHHhCcceecCCcCcCcc
Confidence 446789999999987 2 2347777764 34567899999999999999999987444433211
Q ss_pred CCCcccccCceeeeecc---ccCCeEEEEEee
Q 006073 230 DPNRIGRFGVGFKTGAM---RLGKDALVLTQT 258 (662)
Q Consensus 230 ~~~~IG~fGiGfKsA~~---~lg~~v~V~Sk~ 258 (662)
.....+-.|+|+..+-. ..|-++.|.|..
T Consensus 135 ~~~~~~G~GLGL~i~k~ive~hgG~I~v~s~~ 166 (190)
T d1jm6a2 135 GGTPLAGFGYGLPISRLYAKYFQGDLQLFSME 166 (190)
T ss_dssp -----CCSSCHHHHHHHHHHHTTCEEEEEEET
T ss_pred cccccCCCCccHHHHHHHHHHCCCEEEEEecC
Confidence 12234567888854321 456777777653
No 15
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}
Probab=97.50 E-value=4.7e-05 Score=69.89 Aligned_cols=89 Identities=13% Similarity=0.187 Sum_probs=54.8
Q ss_pred HHHHHHHHHhcccccCC---C--ccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhh-cccCCCCCCCCCcccc
Q 006073 163 IFGAIAELVDNSRDAKA---T--KLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGR 236 (662)
Q Consensus 163 ~f~AIaELIdNA~DA~A---t--~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~-fG~s~k~~~~~~~IG~ 236 (662)
+..+|..||+||+.+.. . .|.|.+.. ..+.-.|+|.|||.||+++++.+++. |-..... .....+-
T Consensus 50 l~qvl~NLi~NAik~t~~~~~~~~i~i~~~~------~~~~~~i~V~D~G~GI~~~~~~~iF~~F~~~~~~--~~~~~~G 121 (161)
T d2c2aa2 50 IRQVLLNLLNNGVKYSKKDAPDKYVKVILDE------KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSS--LTYEVPG 121 (161)
T ss_dssp HHHHHHHHHHHHHHTCCTTCTTCEEEEEEEE------ETTEEEEEEEECSSCCCGGGTTGGGSTTCCCC-----------
T ss_pred HHHHHHHHHHHHHHhhhcCCCcceeeEEEEe------cCCEEEEEEEEcCCCCCHHHHHHhhCCcEEcCCC--CCCCCCc
Confidence 34569999999998853 2 35555442 23456899999999999999999986 4332221 1122344
Q ss_pred cCceeeee---ccccCCeEEEEEeeC
Q 006073 237 FGVGFKTG---AMRLGKDALVLTQTA 259 (662)
Q Consensus 237 fGiGfKsA---~~~lg~~v~V~Sk~~ 259 (662)
.|+|+..+ .-..|-++.|.|...
T Consensus 122 ~GLGL~i~k~iv~~hgG~i~v~s~~~ 147 (161)
T d2c2aa2 122 TGLGLAITKEIVELHGGRIWVESEVG 147 (161)
T ss_dssp CCCTHHHHHHHHHHTTCEEEEEEETT
T ss_pred ccHHHHHHHHHHHHCCCEEEEEecCC
Confidence 58887432 224577777777643
No 16
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]}
Probab=97.42 E-value=8.7e-05 Score=69.34 Aligned_cols=140 Identities=18% Similarity=0.172 Sum_probs=81.1
Q ss_pred HHHHHHhccccc----CCCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhhcccCCCCCCCCCcccccCc--
Q 006073 166 AIAELVDNSRDA----KATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGV-- 239 (662)
Q Consensus 166 AIaELIdNA~DA----~At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~fG~s~k~~~~~~~IG~fGi-- 239 (662)
.|.|+||||+|. .|+.|.|.+.. ...++|.|||.||+-+- .. + -|..++
T Consensus 9 lv~EivDNsiDEa~aG~~~~I~V~l~~---------D~si~V~D~GRGIPvd~-------h~--~-------~~~~~~e~ 63 (168)
T d1s14a_ 9 LGQEVIDNSVDEALAGHAKRVDVILHA---------DQSLEVIDDGRGMPVDI-------HP--E-------EGVPAVEL 63 (168)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEECT---------TSCEEEEECSSCCCCSB-------CT--T-------TCSBHHHH
T ss_pred EEeeeeecHHHHHHcCCCCEEEEEEeC---------CCeEEEEEEecccceee-------ec--c-------CCCchhhc
Confidence 489999999995 37889988862 35799999999998531 00 0 011111
Q ss_pred eee-eeccccCCeEEEEEeeCCCCceeEEEeeecCCCc--cEE-EcCcccCCCCcEEEEEecccchhhhhhhhhhhhhcC
Q 006073 240 GFK-TGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKD--NLE-IPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFS 315 (662)
Q Consensus 240 GfK-sA~~~lg~~v~V~Sk~~g~~s~~~ls~sf~~g~~--~i~-VP~~~~~~~Gt~I~l~~~~~~e~~~~~~L~~I~kyS 315 (662)
.|- |+.=.|+..+.|.++++|. .+.+.|..|.- .+. +....-...||.|...+.++- .+-.
T Consensus 64 v~t~SVVNALS~~l~v~v~RdGk----~~~q~f~~G~~~~~l~~~~~~~~~~tGT~I~F~PD~~I-----------F~~~ 128 (168)
T d1s14a_ 64 ILCISVVNALSKRVEVNVRRDGQ----VYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDETF-----------FDSP 128 (168)
T ss_dssp HHHTSHHHHHEEEEEEEEEETTE----EEEEEEETTEEEEEEEEEEECCTTCCEEEEEEEECGGG-----------SSCC
T ss_pred cCceeEeeeccCeEEEEEEECCE----EEEEEECCCccCCcccceeecccCCCcEEEEEeeccce-----------eccc
Confidence 111 3344789999999999885 45677755532 111 222222346999887664321 1111
Q ss_pred CCchhhHHHhhccccCCCCCcEEEEEeccC
Q 006073 316 PFNKYLIGEKAGLFQDKCTGTQIYIWNLDQ 345 (662)
Q Consensus 316 pF~s~~I~e~~~~~~~~~~GT~IiI~NL~r 345 (662)
-|...-|.+.+....--..|.+|.+.+-+.
T Consensus 129 ~f~~~~l~~rlre~AfLn~GL~I~l~Der~ 158 (168)
T d1s14a_ 129 RFSVSRLTHVLKAKAVLCPGVEITFKDEIN 158 (168)
T ss_dssp SCCHHHHHHHHHHHHHHSTTCEEEEEETTT
T ss_pred cccHHHHHHHHHHHhhcCCCCEEEEEEcCC
Confidence 233322333322222125899999987643
No 17
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.35 E-value=0.0001 Score=63.08 Aligned_cols=49 Identities=24% Similarity=0.285 Sum_probs=37.1
Q ss_pred HHHHHHHhcccccC----------CCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHh
Q 006073 165 GAIAELVDNSRDAK----------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMT 219 (662)
Q Consensus 165 ~AIaELIdNA~DA~----------At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l 219 (662)
.++..||.||++|. ...|.|.+.. ..+.-.|.|.|||.||+++++.+.|
T Consensus 67 qvl~NLl~NAi~~~~~~~~~~~~~~~~I~i~~~~------~~~~v~i~V~D~G~GI~~e~~~~IF 125 (125)
T d1y8oa2 67 HMLFELFKNSMRATVELYEDRKEGYPAVKTLVTL------GKEDLSIKISDLGGGVPLRKIDRLF 125 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSCCCCEEEEEEE------CSSEEEEEEEECSCCCCHHHHGGGG
T ss_pred HHHHHHHHHHHHhhhccccccCCCceeEEEEeec------CCCEEEEEEEEeCCCcCHHHHcccC
Confidence 46888999999872 2456666653 3456788999999999999988764
No 18
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]}
Probab=96.87 E-value=0.00019 Score=63.62 Aligned_cols=58 Identities=12% Similarity=0.041 Sum_probs=37.6
Q ss_pred HHHHHHHHHhcccccCC----CccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhhcccC
Q 006073 163 IFGAIAELVDNSRDAKA----TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHK 224 (662)
Q Consensus 163 ~f~AIaELIdNA~DA~A----t~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~fG~s 224 (662)
...++..||+||++|.. ....|.+... ...+.-.|.|.|||.||+++.+.++|.-|+.
T Consensus 98 l~qvl~Nll~NAi~~~~~~~~~~~~I~i~~~----~~~~~~~i~v~D~G~gi~~e~l~~if~~~y~ 159 (179)
T d1ixma_ 98 LAKLMRKLFHLFDQAVSRESENHLTVSLQTD----HPDRQLILYLDFHGAFADPSAFDDIRQNGYE 159 (179)
T ss_dssp HHHHHHHHHHHHHHHBCTTSCCEEEEEEECC----CSSSSCEEEEEEESCBSCGGGCC--------
T ss_pred hHHHHHHHHHHHHHHhhhccccchhhhhhhc----ccccEEEEEEEeCCCCcCHHHHHHHHHhccc
Confidence 45678899999999843 3344555421 2456789999999999999999999876664
No 19
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.84 E-value=0.00058 Score=60.90 Aligned_cols=83 Identities=18% Similarity=0.220 Sum_probs=50.8
Q ss_pred HHHHHHHHHhcccccC-----CCccEEEEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhhcccCCCCCCCCCccccc
Q 006073 163 IFGAIAELVDNSRDAK-----ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRF 237 (662)
Q Consensus 163 ~f~AIaELIdNA~DA~-----At~V~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~fG~s~k~~~~~~~IG~f 237 (662)
+..|+.||+.||+.++ ...|.|.+.. ..+.-.|.|.|||.||+. +...+.-..+.+. ..+.-
T Consensus 40 i~~av~E~v~Nai~ha~~~~~~~~I~i~~~~------~~~~l~i~i~D~G~gi~~--~~~~~~~~~~~~~-----~~~~~ 106 (139)
T d1th8a_ 40 IKTVVSEAVTNAIIHGYNNDPNGIVSISVII------EDGVVHLTVRDEGVGIPD--IEEARQPLFTTKP-----ELERS 106 (139)
T ss_dssp HHHHHHHHHHHHHHTTSTTCTTSEEEEEEEE------ETTEEEEEEEECSSCCSC--HHHHTCCC------------CCC
T ss_pred HHHHHHHhhhhhhheecCCCCCcEEEEEEEE------ecCEEEEEEccccccccc--ccccccccceecc-----cCCCc
Confidence 5579999999999974 2356666654 245678999999999974 3344321111111 11223
Q ss_pred CceeeeeccccCCeEEEEEeeC
Q 006073 238 GVGFKTGAMRLGKDALVLTQTA 259 (662)
Q Consensus 238 GiGfKsA~~~lg~~v~V~Sk~~ 259 (662)
|+|+. -.-++++++.|.|...
T Consensus 107 GlGL~-iv~~l~d~i~i~s~~~ 127 (139)
T d1th8a_ 107 GMGFT-IMENFMDEVIVESEVN 127 (139)
T ss_dssp SCHHH-HHHHHSSEEEEEEETT
T ss_pred hHHHH-HHHHhCCEEEEEEcCC
Confidence 88874 2335677887777543
No 20
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.46 E-value=0.00018 Score=65.41 Aligned_cols=87 Identities=13% Similarity=0.105 Sum_probs=39.2
Q ss_pred HHHHHHHHHhcccccCCCcc---EE------EEEecccccCCCCCCEEEEEeCCCCCCHHHHHHHhhcccCCCCCCCCCc
Q 006073 163 IFGAIAELVDNSRDAKATKL---EI------SIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNR 233 (662)
Q Consensus 163 ~f~AIaELIdNA~DA~At~V---~I------~I~~~~~~~~~~~~~~L~I~DNG~GMt~eel~~~l~fG~s~k~~~~~~~ 233 (662)
+..++..||+||++|....- .+ .+... .......-.|.|.|||.||+++++.+++.-.++.+.
T Consensus 45 l~qvl~NLl~NA~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~G~Gi~~~~~~~iF~pf~s~k~------ 116 (156)
T d1r62a_ 45 IEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLH--GERYRLAARIDVEDNGPGIPPHLQDTLFYPMVSGRE------ 116 (156)
T ss_dssp HHHHHHHHHHHHHHHHGGGCEEEEEEEEEEEEEEET--TEEEEEEEEEEEEEECTTC-----------------------
T ss_pred HHHHHHHHHHHHHHhhhcCCCceeeeccccceeeec--cccCCceEEEEEecCCCCCCHHHHHhhcccceecCC------
Confidence 34569999999999853211 11 11100 000112346899999999999999998864344332
Q ss_pred ccccCceeeeec---cccCCeEEEEEee
Q 006073 234 IGRFGVGFKTGA---MRLGKDALVLTQT 258 (662)
Q Consensus 234 IG~fGiGfKsA~---~~lg~~v~V~Sk~ 258 (662)
+-.|+|+..+- =..|-.+.|.|..
T Consensus 117 -~G~GLGL~i~~~iv~~hgG~i~v~s~~ 143 (156)
T d1r62a_ 117 -GGTGLGLSIARNLIDQHSGKIEFTSWP 143 (156)
T ss_dssp ----CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred -CCCCchHHHHHHHHHHCCCEEEEEEeC
Confidence 23488875321 1456777776654
No 21
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=85.77 E-value=0.1 Score=39.94 Aligned_cols=35 Identities=17% Similarity=0.444 Sum_probs=23.7
Q ss_pred CCCCceecccchhhhhcCC-CCCCC--CCCCCceeecc
Q 006073 549 KPDQEWVQCNKCRKWRMLD-PGFDT--KSLPVEWFCYM 583 (662)
Q Consensus 549 ~~~~~WvQCd~C~KWR~Lp-~~~~~--~~lp~~W~C~~ 583 (662)
..+..|||||.|.+|-..- .++.. ...++.|+|..
T Consensus 17 ~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~ 54 (64)
T d1we9a_ 17 AADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPS 54 (64)
T ss_dssp CSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHH
T ss_pred CCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcC
Confidence 3456899999999998765 22322 22447899964
No 22
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=82.55 E-value=0.25 Score=38.47 Aligned_cols=32 Identities=22% Similarity=0.828 Sum_probs=23.7
Q ss_pred CCceecccchhhhhcCC-CCCC-CCCCCCceeec
Q 006073 551 DQEWVQCNKCRKWRMLD-PGFD-TKSLPVEWFCY 582 (662)
Q Consensus 551 ~~~WvQCd~C~KWR~Lp-~~~~-~~~lp~~W~C~ 582 (662)
...|||||.|.+|-.+. .++. ....++.|+|.
T Consensus 28 ~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~ 61 (72)
T d1weea_ 28 GERMLACDGCGVWHHTRCIGINNADALPSKFLCF 61 (72)
T ss_dssp SSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCH
T ss_pred CCeEEEeCCCCCcCchhhcCCccccCCCCcEECc
Confidence 45799999999999885 2332 23566899995
No 23
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.55 E-value=0.52 Score=37.38 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=23.3
Q ss_pred CCCCceecccchhhhhcCC-CCCCC--CCCCCceeecc
Q 006073 549 KPDQEWVQCNKCRKWRMLD-PGFDT--KSLPVEWFCYM 583 (662)
Q Consensus 549 ~~~~~WvQCd~C~KWR~Lp-~~~~~--~~lp~~W~C~~ 583 (662)
.++..|||||.|..|-... .++.. ...++.|+|..
T Consensus 22 ~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~ 59 (79)
T d1wepa_ 22 NVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPD 59 (79)
T ss_dssp CSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTT
T ss_pred CCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECcc
Confidence 3456899999999998764 12221 13446799975
No 24
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.63 E-value=1 Score=34.96 Aligned_cols=33 Identities=18% Similarity=0.530 Sum_probs=21.1
Q ss_pred CCceecccchhhhhcCCC-CCCC------CCCCCceeecc
Q 006073 551 DQEWVQCNKCRKWRMLDP-GFDT------KSLPVEWFCYM 583 (662)
Q Consensus 551 ~~~WvQCd~C~KWR~Lp~-~~~~------~~lp~~W~C~~ 583 (662)
+..|||||.|.+|=.+.= ++.. ...++.|+|..
T Consensus 27 ~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~ 66 (76)
T d1wema_ 27 NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPN 66 (76)
T ss_dssp SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHH
T ss_pred CCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECCC
Confidence 347999999999976541 2211 12356799863
No 25
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.75 E-value=2.7 Score=31.28 Aligned_cols=33 Identities=18% Similarity=0.394 Sum_probs=21.7
Q ss_pred CCceecccchhhhhcCCC-CCCCCCC-CCceeecc
Q 006073 551 DQEWVQCNKCRKWRMLDP-GFDTKSL-PVEWFCYM 583 (662)
Q Consensus 551 ~~~WvQCd~C~KWR~Lp~-~~~~~~l-p~~W~C~~ 583 (662)
...+|+||.|.+|=.+.= ....... .+.|+|..
T Consensus 18 ~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~ 52 (61)
T d1mm2a_ 18 GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPR 52 (61)
T ss_dssp CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTT
T ss_pred CCeEEEeCCCCccCchhhcCCCcCcCCCCcEECCC
Confidence 347999999999977642 1112233 35899975
No 26
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.17 E-value=4.5 Score=28.75 Aligned_cols=30 Identities=30% Similarity=0.682 Sum_probs=19.1
Q ss_pred CceecccchhhhhcCC---CCCCCCCCC-Cceeecc
Q 006073 552 QEWVQCNKCRKWRMLD---PGFDTKSLP-VEWFCYM 583 (662)
Q Consensus 552 ~~WvQCd~C~KWR~Lp---~~~~~~~lp-~~W~C~~ 583 (662)
..+|+||.|.+|=.+. ..+ ...| +.|+|..
T Consensus 13 ~~~i~Cd~C~~~~H~~C~~p~~--~~~p~~~W~C~~ 46 (51)
T d1f62a_ 13 DKLILCDECNKAFHLFCLRPAL--YEVPDGEWQCPA 46 (51)
T ss_dssp SCCEECTTTCCEECHHHHCTTC--CSCCSSCCSCTT
T ss_pred CCEEEcCCCCCCCCCCCCCCCC--CcCCCCCEECcC
Confidence 4679999999886542 111 1233 4899963
No 27
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.86 E-value=14 Score=28.89 Aligned_cols=33 Identities=21% Similarity=0.548 Sum_probs=21.1
Q ss_pred CCceecccchhhhhcCCC---CCC--CCCCCC-ceeecc
Q 006073 551 DQEWVQCNKCRKWRMLDP---GFD--TKSLPV-EWFCYM 583 (662)
Q Consensus 551 ~~~WvQCd~C~KWR~Lp~---~~~--~~~lp~-~W~C~~ 583 (662)
...+|+||.|..|=.+.= .+. ....|+ .|+|..
T Consensus 30 ~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~ 68 (88)
T d1weva_ 30 GNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCAR 68 (88)
T ss_dssp TCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHH
T ss_pred CCeEEEcCCCCCccccccCCCcccccccccCCCeEECcc
Confidence 347999999999976542 111 112343 899976
No 28
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=25.70 E-value=7.4 Score=30.14 Aligned_cols=31 Identities=16% Similarity=0.513 Sum_probs=19.3
Q ss_pred ceecccchhhhhcCC-CCC------CCCCCCCceeecc
Q 006073 553 EWVQCNKCRKWRMLD-PGF------DTKSLPVEWFCYM 583 (662)
Q Consensus 553 ~WvQCd~C~KWR~Lp-~~~------~~~~lp~~W~C~~ 583 (662)
.|+||+.|..|=... -++ ....+|+.|+|..
T Consensus 31 i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~ 68 (78)
T d1wewa_ 31 IQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEI 68 (78)
T ss_dssp EECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHH
T ss_pred EEEeCCCCCcCCCccccCccccccccccCCCCEEECCC
Confidence 344555899997654 111 2245778999964
Done!