Your job contains 1 sequence.
>006074
MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD
RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL
LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY
LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALESLRQ
ALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI
NLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLA
KRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKL
PSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCV
LKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVR
VLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVD
AAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNY
LA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006074
(662 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2162060 - symbol:CUL4 "cullin4" species:3702 "... 2945 6.2e-307 1
UNIPROTKB|E1BQK9 - symbol:CUL4B "Uncharacterized protein"... 2094 9.4e-217 1
UNIPROTKB|K4DI93 - symbol:CUL4B "Cullin 4B, isoform CRA_e... 2083 1.4e-215 1
UNIPROTKB|Q13620 - symbol:CUL4B "Cullin-4B" species:9606 ... 2083 1.4e-215 1
UNIPROTKB|E1BFD5 - symbol:CUL4B "Uncharacterized protein"... 2082 1.7e-215 1
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 2080 2.8e-215 1
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 2076 7.6e-215 1
ZFIN|ZDB-GENE-041008-208 - symbol:cul4b "cullin 4B" speci... 2066 8.7e-214 1
UNIPROTKB|F1P2U1 - symbol:CUL4A "Uncharacterized protein"... 2039 6.3e-211 1
UNIPROTKB|Q13619 - symbol:CUL4A "Cullin-4A" species:9606 ... 2036 1.3e-210 1
UNIPROTKB|F1Q284 - symbol:CUL4A "Uncharacterized protein"... 2023 3.1e-209 1
MGI|MGI:1914487 - symbol:Cul4a "cullin 4A" species:10090 ... 2020 6.5e-209 1
UNIPROTKB|F1RN43 - symbol:CUL4A "Uncharacterized protein"... 2011 5.8e-208 1
UNIPROTKB|F1N3S4 - symbol:CUL4A "Uncharacterized protein"... 2010 7.5e-208 1
RGD|1564494 - symbol:Cul4b "cullin 4B" species:10116 "Rat... 1063 6.3e-203 2
FB|FBgn0033260 - symbol:Cul-4 "Cullin-4" species:7227 "Dr... 1899 4.3e-196 1
DICTYBASE|DDB_G0292794 - symbol:culD "cullin D" species:4... 1372 1.3e-176 2
ZFIN|ZDB-GENE-040426-1357 - symbol:cul4a "cullin 4A" spec... 1600 2.1e-164 1
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 1132 5.5e-143 2
TAIR|locus:2205020 - symbol:CUL3B "AT1G69670" species:370... 1326 2.3e-135 1
TAIR|locus:2200670 - symbol:CUL3 "AT1G26830" species:3702... 1319 1.2e-134 1
UNIPROTKB|I3L5M8 - symbol:LOC100739075 "Uncharacterized p... 1223 1.9e-124 1
FB|FBgn0261268 - symbol:Cul-3 "Cullin-3" species:7227 "Dr... 880 5.1e-123 2
ASPGD|ASPL0000052453 - symbol:culD species:162425 "Emeric... 902 2.2e-122 2
UNIPROTKB|F1RUC1 - symbol:CUL4B "Uncharacterized protein"... 1071 2.4e-108 1
POMBASE|SPAC3A11.08 - symbol:pcu4 "cullin 4" species:4896... 1057 7.2e-107 1
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 772 2.5e-104 2
POMBASE|SPAC24H6.03 - symbol:cul3 "cullin 3" species:4896... 755 4.0e-104 2
UNIPROTKB|K7GPT4 - symbol:LOC100739075 "Uncharacterized p... 1008 1.1e-101 1
WB|WBGene00000839 - symbol:cul-4 species:6239 "Caenorhabd... 952 9.7e-96 1
UNIPROTKB|Q6GPF3 - symbol:cul3b "Cullin-3-B" species:8355... 944 6.8e-95 1
UNIPROTKB|A4IHP4 - symbol:cul3 "Cullin-3" species:8364 "X... 942 1.1e-94 1
UNIPROTKB|Q6DE95 - symbol:cul3a "Cullin-3-A" species:8355... 942 1.1e-94 1
UNIPROTKB|E1BIN5 - symbol:CUL3 "Uncharacterized protein" ... 938 3.0e-94 1
UNIPROTKB|F1PU58 - symbol:CUL3 "Uncharacterized protein" ... 938 3.0e-94 1
MGI|MGI:1347360 - symbol:Cul3 "cullin 3" species:10090 "M... 938 3.0e-94 1
RGD|1308190 - symbol:Cul3 "cullin 3" species:10116 "Rattu... 938 3.0e-94 1
UNIPROTKB|E1BYQ3 - symbol:CUL3 "Uncharacterized protein" ... 935 6.1e-94 1
UNIPROTKB|Q13618 - symbol:CUL3 "Cullin-3" species:9606 "H... 932 1.3e-93 1
ZFIN|ZDB-GENE-081007-1 - symbol:cul3b "cullin 3b" species... 928 3.4e-93 1
WB|WBGene00000838 - symbol:cul-3 species:6239 "Caenorhabd... 609 4.8e-93 2
UNIPROTKB|Q17391 - symbol:cul-3 "Cullin-3" species:6239 "... 609 4.8e-93 2
ZFIN|ZDB-GENE-030131-3376 - symbol:cul3a "cullin 3a" spec... 923 1.1e-92 1
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 703 1.5e-91 2
UNIPROTKB|E1C0W8 - symbol:CUL1 "Uncharacterized protein" ... 796 1.2e-83 2
POMBASE|SPAC17G6.12 - symbol:cul1 "cullin 1" species:4896... 800 1.2e-79 1
UNIPROTKB|F1MYD0 - symbol:CUL1 "Uncharacterized protein" ... 796 3.3e-79 1
UNIPROTKB|E2R1V2 - symbol:CUL1 "Uncharacterized protein" ... 796 3.3e-79 1
UNIPROTKB|Q13616 - symbol:CUL1 "Cullin-1" species:9606 "H... 796 3.3e-79 1
UNIPROTKB|Q5R4G6 - symbol:CUL1 "Cullin-1" species:9601 "P... 796 3.3e-79 1
MGI|MGI:1349658 - symbol:Cul1 "cullin 1" species:10090 "M... 796 3.3e-79 1
RGD|1308157 - symbol:Cul1 "cullin 1" species:10116 "Rattu... 796 3.3e-79 1
ASPGD|ASPL0000060435 - symbol:culA species:162425 "Emeric... 796 3.3e-79 1
DICTYBASE|DDB_G0291972 - symbol:culA "cullin A" species:4... 793 6.8e-79 1
ZFIN|ZDB-GENE-040426-2887 - symbol:cul1b "cullin 1b" spec... 788 2.3e-78 1
UNIPROTKB|F1SAD7 - symbol:CUL1 "Uncharacterized protein" ... 782 1.0e-77 1
ZFIN|ZDB-GENE-030131-2603 - symbol:cul1a "cullin 1a" spec... 782 1.0e-77 1
ZFIN|ZDB-GENE-030131-8032 - symbol:cul2 "cullin 2" specie... 756 5.7e-75 1
UNIPROTKB|E2QRU7 - symbol:CUL2 "Uncharacterized protein" ... 752 1.5e-74 1
UNIPROTKB|Q13617 - symbol:CUL2 "Cullin-2" species:9606 "H... 750 2.5e-74 1
UNIPROTKB|Q5T2B7 - symbol:CUL2 "Cullin-2" species:9606 "H... 750 2.5e-74 1
UNIPROTKB|Q08DE9 - symbol:CUL2 "Uncharacterized protein" ... 749 3.1e-74 1
MGI|MGI:1918995 - symbol:Cul2 "cullin 2" species:10090 "M... 744 1.1e-73 1
UNIPROTKB|G3N0Q3 - symbol:G3N0Q3 "Uncharacterized protein... 730 3.2e-72 1
WB|WBGene00000836 - symbol:cul-1 species:6239 "Caenorhabd... 646 7.6e-72 2
FB|FBgn0015509 - symbol:lin19 "lin-19-like" species:7227 ... 633 3.3e-71 2
UNIPROTKB|F1N829 - symbol:CUL2 "Uncharacterized protein" ... 720 3.7e-71 1
DICTYBASE|DDB_G0267384 - symbol:culB "cullin B" species:4... 575 4.2e-71 2
UNIPROTKB|F1SR61 - symbol:LOC100511787 "Uncharacterized p... 715 1.3e-70 1
UNIPROTKB|D4A0H4 - symbol:Cul2 "Cullin 2 (Predicted), iso... 705 1.4e-69 1
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 685 1.9e-67 1
UNIPROTKB|F1RUR7 - symbol:CUL2 "Uncharacterized protein" ... 660 8.5e-65 1
WB|WBGene00000841 - symbol:cul-6 species:6239 "Caenorhabd... 660 8.5e-65 1
UNIPROTKB|G4N0J9 - symbol:MGG_07731 "Cullin-3" species:24... 313 3.0e-64 3
UNIPROTKB|Q5T2B5 - symbol:CUL2 "Cullin-2" species:9606 "H... 595 2.6e-63 2
RGD|1310644 - symbol:Cul2 "cullin 2" species:10116 "Rattu... 588 1.4e-62 2
FB|FBgn0032956 - symbol:Cul-2 "Cullin-2" species:7227 "Dr... 622 9.0e-61 1
DICTYBASE|DDB_G0278991 - symbol:culE "cullin E" species:4... 607 3.5e-59 1
CGD|CAL0000107 - symbol:CDC53 species:5476 "Candida albic... 404 1.3e-58 2
UNIPROTKB|Q5AJB7 - symbol:CDC53 "Putative uncharacterized... 404 1.3e-58 2
ASPGD|ASPL0000014731 - symbol:culC species:162425 "Emeric... 439 4.9e-56 2
UNIPROTKB|F1P2W9 - symbol:CUL2 "Uncharacterized protein" ... 549 4.2e-55 2
WB|WBGene00000837 - symbol:cul-2 species:6239 "Caenorhabd... 503 7.3e-53 2
UNIPROTKB|Q17390 - symbol:cul-2 "Cullin-2" species:6239 "... 503 7.3e-53 2
FB|FBgn0039632 - symbol:Cul-5 "Cullin-5" species:7227 "Dr... 405 4.0e-49 2
SGD|S000002290 - symbol:CDC53 "Cullin" species:4932 "Sacc... 328 3.6e-48 3
MGI|MGI:1922967 - symbol:Cul5 "cullin 5" species:10090 "M... 360 1.4e-46 2
RGD|621742 - symbol:Cul5 "cullin 5" species:10116 "Rattus... 360 6.1e-46 2
UNIPROTKB|Q9JJ31 - symbol:Cul5 "Cullin-5" species:10116 "... 360 6.1e-46 2
UNIPROTKB|F1N7B5 - symbol:CUL5 "Uncharacterized protein" ... 360 6.7e-46 2
UNIPROTKB|Q93034 - symbol:CUL5 "Cullin-5" species:9606 "H... 360 7.8e-46 2
UNIPROTKB|I3LFR2 - symbol:CUL5 "Uncharacterized protein" ... 360 7.8e-46 2
UNIPROTKB|J9PAX0 - symbol:CUL5 "Uncharacterized protein" ... 360 8.5e-46 2
UNIPROTKB|A6NE76 - symbol:CUL4B "Cullin-4B" species:9606 ... 478 1.6e-45 1
UNIPROTKB|F1P0F9 - symbol:CUL5 "Uncharacterized protein" ... 359 2.0e-45 2
ZFIN|ZDB-GENE-030131-5426 - symbol:cul5a "cullin 5a" spec... 347 1.7e-43 2
UNIPROTKB|F1P9Q4 - symbol:CUL5 "Uncharacterized protein" ... 350 4.7e-42 2
ZFIN|ZDB-GENE-091113-45 - symbol:cul5b "cullin 5b" specie... 357 5.6e-42 2
TAIR|locus:2118111 - symbol:AT4G12100 species:3702 "Arabi... 442 2.0e-41 1
UNIPROTKB|F1SR60 - symbol:F1SR60 "Uncharacterized protein... 393 6.5e-36 1
WARNING: Descriptions of 30 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2162060 [details] [associations]
symbol:CUL4 "cullin4" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009640 "photomorphogenesis" evidence=RCA;IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0048575 "short-day photoperiodism, flowering" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009640 GO:GO:0010182
GO:GO:0009755 GO:GO:0006511 GO:GO:0009908 GO:GO:0048366
GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0048825
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K10609
GO:GO:0080008 GO:GO:0010100 HSSP:Q9JLV5 OMA:FEDSLDF EMBL:AJ318018
EMBL:AB025620 EMBL:AY091113 EMBL:AY084267 IPI:IPI00538554
RefSeq:NP_568658.1 UniGene:At.20972 ProteinModelPortal:Q8LGH4
SMR:Q8LGH4 DIP:DIP-40462N IntAct:Q8LGH4 STRING:Q8LGH4 PaxDb:Q8LGH4
PRIDE:Q8LGH4 EnsemblPlants:AT5G46210.1 GeneID:834663
KEGG:ath:AT5G46210 TAIR:At5g46210 InParanoid:Q8LGH4
PhylomeDB:Q8LGH4 ProtClustDB:CLSN2689940 Genevestigator:Q8LGH4
GO:GO:0048575 Uniprot:Q8LGH4
Length = 792
Score = 2945 (1041.8 bits), Expect = 6.2e-307, P = 6.2e-307
Identities = 576/662 (87%), Positives = 612/662 (92%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ G LY +IEKECEEHISAA++SLVGQ+ DL VFLS VE+CWQD CDQMLMIR IAL LD
Sbjct: 131 LDGKLYDQIEKECEEHISAALQSLVGQNTDLTVFLSRVEKCWQDFCDQMLMIRSIALTLD 190
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
R YV Q PNVRSLW+MGLQLFRK+LS EVE +TV GLL MIE+ERL EAV+RTLL+HL
Sbjct: 191 RKYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERLAEAVNRTLLSHL 250
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY 180
LKMFTALGIY ESFEKPFLE TSEFYAAEGMKYMQQSDVP+YLKHVE RLHEE+ERC+LY
Sbjct: 251 LKMFTALGIYMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEENERCILY 310
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALESLRQ 240
+D TRKPLI T ERQLLERHI +L+KGFT LMDG RTEDLQRM +LFSRVNALESLRQ
Sbjct: 311 IDAVTRKPLITTVERQLLERHILVVLEKGFTTLMDGRRTEDLQRMQTLFSRVNALESLRQ 370
Query: 241 ALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
AL+ Y+R+TG IVMDEEKDKDMV SLL+FKASLD IWE+SF KNE+F NTIKD+FE+LI
Sbjct: 371 ALSSYVRKTGQKIVMDEEKDKDMVQSLLDFKASLDIIWEESFYKNESFGNTIKDSFEHLI 430
Query: 301 NLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLA 360
NLRQNRPAELIAKFLDEKLRAGNKGTSEEELE L+KVLVLFRFIQGKDVFEAFYKKDLA
Sbjct: 431 NLRQNRPAELIAKFLDEKLRAGNKGTSEEELESVLEKVLVLFRFIQGKDVFEAFYKKDLA 490
Query: 361 KRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKL 420
KRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKL
Sbjct: 491 KRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKL 550
Query: 421 PSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCV 480
PSGIEMSVHVLTTGYWPTYPPMDV+LPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCV
Sbjct: 551 PSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCV 610
Query: 481 LKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVR 540
LKA+F KGKKELAVSLFQ VVLMLFNDA KLSF+DIKD+T IEDKELRRTLQSLACGKVR
Sbjct: 611 LKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTSIEDKELRRTLQSLACGKVR 670
Query: 541 VLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVD 600
VLQK PKGRDVED D F FN+ F APLYRIKVNAIQMKETVEENTSTTERVFQDRQYQ+D
Sbjct: 671 VLQKNPKGRDVEDGDEFEFNDEFAAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQID 730
Query: 601 AAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNY 660
AAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLER+K+NPQIYNY
Sbjct: 731 AAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLEREKSNPQIYNY 790
Query: 661 LA 662
LA
Sbjct: 791 LA 792
>UNIPROTKB|E1BQK9 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:AADN02013619 IPI:IPI00584907 Ensembl:ENSGALT00000013942
Uniprot:E1BQK9
Length = 884
Score = 2094 (742.2 bits), Expect = 9.4e-217, P = 9.4e-217
Identities = 405/663 (61%), Positives = 507/663 (76%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ NLY+++ + CE+HI A I S D V+FL +++CWQD C QM+MIR I L+LD
Sbjct: 222 ISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLD 281
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
RTYV Q + S+WDMGL+LFR ++ S +V++KT+ G+L +IERER GEA+DR+LL L
Sbjct: 282 RTYVLQNSMLPSIWDMGLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSL 341
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY 180
L M + L IY +SFE FLE T+ YAAEG + MQ+ +VP+YL HV RL EE +R + Y
Sbjct: 342 LSMLSDLQIYQDSFEHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITY 401
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLR 239
LD ST+KPLIAT E+QLL H++AIL KG L+D +R +DL +Y LFSRV ++ L
Sbjct: 402 LDQSTQKPLIATVEKQLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLL 461
Query: 240 QALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
Q YI+ G IV++ EKDK MV LL+FK +D I + F KNE F N +K+AFE
Sbjct: 462 QHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETF 521
Query: 300 INLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDL 359
IN R N+PAELIAK++D KLRAGNK ++EELE LDK++++FRFI GKDVFEAFYKKDL
Sbjct: 522 INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 581
Query: 360 AKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTK 419
AKRLL+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ
Sbjct: 582 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQQYMQNQN 641
Query: 420 LPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHC 479
+P IE++V++LT GYWPTY PM+V LP E+ Q+IFK FYL K+SGR+L WQ++LGHC
Sbjct: 642 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 701
Query: 480 VLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV 539
VLKAEF +GKKEL VSLFQT+VL++FN+ ++ S ++IK ATGIED ELRRTLQSLACGK
Sbjct: 702 VLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKA 761
Query: 540 RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQV 599
RVL K PKG+DVED D F N+ F L+RIK+N IQMKETVEE STTERVFQDRQYQ+
Sbjct: 762 RVLTKSPKGKDVEDGDKFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 821
Query: 600 DAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYN 659
DAAIVRIMK RK LSH LL++E++ QLKFP+KPADLKKRIESLIDR+Y+ERDK NP YN
Sbjct: 822 DAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYN 881
Query: 660 YLA 662
Y+A
Sbjct: 882 YIA 884
>UNIPROTKB|K4DI93 [details] [associations]
symbol:CUL4B "Cullin 4B, isoform CRA_e" species:9606 "Homo
sapiens" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 EMBL:CH471107
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AC002476 EMBL:AL451005 HGNC:HGNC:2555 Ensembl:ENST00000336592
Uniprot:K4DI93
Length = 900
Score = 2083 (738.3 bits), Expect = 1.4e-215, P = 1.4e-215
Identities = 404/663 (60%), Positives = 510/663 (76%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ NLY+++ + CE+HI A I S D V+FL ++RCWQ+ C QM+MIR I L+LD
Sbjct: 239 ISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLD 298
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
RTYV Q + S+WDMGL+LFR ++ S +V++KT+ G+L +IERER GEA+DR+LL L
Sbjct: 299 RTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSL 358
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY 180
L M + L IY +SFE+ FLE T+ YAAEG K MQ+ +VP+YL HV RL EE +R + Y
Sbjct: 359 LSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITY 418
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLR 239
LD +T+K LIAT E+QLL H++AIL KG L+D +R +DL +Y LFSRV ++ L
Sbjct: 419 LDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 478
Query: 240 QALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
Q YI+ G IV++ EKDK MV LL+FK +D I + F KNE F N +K+AFE
Sbjct: 479 QQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETF 538
Query: 300 INLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDL 359
IN R N+PAELIAK++D KLRAGNK ++EELE LDK++++FRFI GKDVFEAFYKKDL
Sbjct: 539 INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 598
Query: 360 AKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTK 419
AKRLL+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q +
Sbjct: 599 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN- 657
Query: 420 LPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHC 479
+P IE++V++LT GYWPTY PM+V LP E+ Q+IFK FYL K+SGR+L WQ++LGHC
Sbjct: 658 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 717
Query: 480 VLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV 539
VLKAEF +GKKEL VSLFQT+VL++FN+ ++ S ++IK ATGIED ELRRTLQSLACGK
Sbjct: 718 VLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKA 777
Query: 540 RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQV 599
RVL K PKG+D+ED D F+ N+ F L+RIK+N IQMKETVEE STTERVFQDRQYQ+
Sbjct: 778 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 837
Query: 600 DAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYN 659
DAAIVRIMK RK LSH LL++E++ QLKFP+KPADLKKRIESLIDR+Y+ERDK NP YN
Sbjct: 838 DAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYN 897
Query: 660 YLA 662
Y+A
Sbjct: 898 YIA 900
>UNIPROTKB|Q13620 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007049
"cell cycle" evidence=NAS] [GO:0031465 "Cul4B-RING ubiquitin ligase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0007049
GO:GO:0006511 EMBL:CH471107 GO:GO:0045732 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
PDB:4A0C PDBsum:4A0C KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0
EMBL:AY365125 EMBL:AF212995 EMBL:AK123688 EMBL:AK299081
EMBL:AK315037 EMBL:BX537787 EMBL:AC002476 EMBL:AL451005
EMBL:BC036216 EMBL:AB014595 EMBL:U58091 IPI:IPI00179057
IPI:IPI00480142 IPI:IPI00965290 RefSeq:NP_001073341.1
RefSeq:NP_003579.3 UniGene:Hs.102914 PDB:2DO7 PDB:4A0L PDB:4A64
PDBsum:2DO7 PDBsum:4A0L PDBsum:4A64 ProteinModelPortal:Q13620
SMR:Q13620 DIP:DIP-31609N IntAct:Q13620 STRING:Q13620
PhosphoSite:Q13620 DMDM:296439468 PaxDb:Q13620 PRIDE:Q13620
DNASU:8450 Ensembl:ENST00000371322 Ensembl:ENST00000404115
GeneID:8450 KEGG:hsa:8450 UCSC:uc004esv.3 UCSC:uc004esw.3 CTD:8450
GeneCards:GC0XM119658 H-InvDB:HIX0017025 HGNC:HGNC:2555
HPA:CAB017786 HPA:HPA011880 MIM:300304 MIM:300354
neXtProt:NX_Q13620 Orphanet:85293 PharmGKB:PA27051 OMA:FEDSLDF
EvolutionaryTrace:Q13620 GenomeRNAi:8450 NextBio:31618
PMAP-CutDB:Q13620 ArrayExpress:Q13620 Bgee:Q13620 CleanEx:HS_CUL4B
Genevestigator:Q13620 GermOnline:ENSG00000158290 GO:GO:0031465
Uniprot:Q13620
Length = 913
Score = 2083 (738.3 bits), Expect = 1.4e-215, P = 1.4e-215
Identities = 404/663 (60%), Positives = 510/663 (76%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ NLY+++ + CE+HI A I S D V+FL ++RCWQ+ C QM+MIR I L+LD
Sbjct: 252 ISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLD 311
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
RTYV Q + S+WDMGL+LFR ++ S +V++KT+ G+L +IERER GEA+DR+LL L
Sbjct: 312 RTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSL 371
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY 180
L M + L IY +SFE+ FLE T+ YAAEG K MQ+ +VP+YL HV RL EE +R + Y
Sbjct: 372 LSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITY 431
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLR 239
LD +T+K LIAT E+QLL H++AIL KG L+D +R +DL +Y LFSRV ++ L
Sbjct: 432 LDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 491
Query: 240 QALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
Q YI+ G IV++ EKDK MV LL+FK +D I + F KNE F N +K+AFE
Sbjct: 492 QQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETF 551
Query: 300 INLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDL 359
IN R N+PAELIAK++D KLRAGNK ++EELE LDK++++FRFI GKDVFEAFYKKDL
Sbjct: 552 INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 611
Query: 360 AKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTK 419
AKRLL+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q +
Sbjct: 612 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN- 670
Query: 420 LPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHC 479
+P IE++V++LT GYWPTY PM+V LP E+ Q+IFK FYL K+SGR+L WQ++LGHC
Sbjct: 671 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 730
Query: 480 VLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV 539
VLKAEF +GKKEL VSLFQT+VL++FN+ ++ S ++IK ATGIED ELRRTLQSLACGK
Sbjct: 731 VLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKA 790
Query: 540 RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQV 599
RVL K PKG+D+ED D F+ N+ F L+RIK+N IQMKETVEE STTERVFQDRQYQ+
Sbjct: 791 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 850
Query: 600 DAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYN 659
DAAIVRIMK RK LSH LL++E++ QLKFP+KPADLKKRIESLIDR+Y+ERDK NP YN
Sbjct: 851 DAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYN 910
Query: 660 YLA 662
Y+A
Sbjct: 911 YIA 913
>UNIPROTKB|E1BFD5 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045750 "positive regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:DAAA02067221 EMBL:DAAA02067222 IPI:IPI00707913
Ensembl:ENSBTAT00000024713 Uniprot:E1BFD5
Length = 965
Score = 2082 (738.0 bits), Expect = 1.7e-215, P = 1.7e-215
Identities = 404/663 (60%), Positives = 510/663 (76%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ NLY+++ + CE+HI A I S D V+FL ++RCWQ+ C QM+MIR I L+LD
Sbjct: 304 ISANLYKQLRQICEDHIKAQIHQFREYSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLD 363
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
RTYV Q + S+WDMGL+LFR ++ S +V++KT+ G+L +IERER GEA+DR+LL L
Sbjct: 364 RTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSL 423
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY 180
L M + L IY +SFE+ FLE T+ YAAEG K MQ+ +VP+YL HV RL EE +R + Y
Sbjct: 424 LSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITY 483
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLR 239
LD +T+K LIAT E+QLL H++AIL KG L+D +R +DL +Y LFSRV ++ L
Sbjct: 484 LDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 543
Query: 240 QALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
Q YI+ G IV++ EKDK MV LL+FK +D I + F KNE F N +K+AFE
Sbjct: 544 QQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETF 603
Query: 300 INLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDL 359
IN R N+PAELIAK++D KLRAGNK ++EELE LDK++++FRFI GKDVFEAFYKKDL
Sbjct: 604 INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 663
Query: 360 AKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTK 419
AKRLL+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q +
Sbjct: 664 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN- 722
Query: 420 LPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHC 479
+P IE++V++LT GYWPTY PM+V LP E+ Q+IFK FYL K+SGR+L WQ++LGHC
Sbjct: 723 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 782
Query: 480 VLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV 539
VLKAEF +GKKEL VSLFQT+VL++FN+ ++ S ++IK ATGIED ELRRTLQSLACGK
Sbjct: 783 VLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKA 842
Query: 540 RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQV 599
RVL K PKG+D+ED D F+ N+ F L+RIK+N IQMKETVEE STTERVFQDRQYQ+
Sbjct: 843 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 902
Query: 600 DAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYN 659
DAAIVRIMK RK LSH LL++E++ QLKFP+KPADLKKRIESLIDR+Y+ERDK NP YN
Sbjct: 903 DAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYN 962
Query: 660 YLA 662
Y+A
Sbjct: 963 YIA 965
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 2080 (737.3 bits), Expect = 2.8e-215, P = 2.8e-215
Identities = 403/663 (60%), Positives = 510/663 (76%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ NLY+++ + CE+HI A I S D V+FL +++CWQ+ C QM+MIR I L+LD
Sbjct: 321 ISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDKCWQNHCRQMIMIRSIFLFLD 380
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
RTYV Q + S+WDMGL+LFR ++ S +V++KT+ G+L +IERER GEA+DR+LL L
Sbjct: 381 RTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSL 440
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY 180
L M + L IY +SFE+ FLE T+ YAAEG K MQ+ +VP+YL HV RL EE +R + Y
Sbjct: 441 LSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITY 500
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLR 239
LD +T+K LIAT E+QLL H++AIL KG L+D +R +DL +Y LFSRV ++ L
Sbjct: 501 LDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 560
Query: 240 QALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
Q YI+ G IV++ EKDK MV LL+FK +D I + F KNE F N +K+AFE
Sbjct: 561 QQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETF 620
Query: 300 INLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDL 359
IN R N+PAELIAK++D KLRAGNK ++EELE LDK++++FRFI GKDVFEAFYKKDL
Sbjct: 621 INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 680
Query: 360 AKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTK 419
AKRLL+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q +
Sbjct: 681 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN- 739
Query: 420 LPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHC 479
+P IE++V++LT GYWPTY PM+V LP E+ Q+IFK FYL K+SGR+L WQ++LGHC
Sbjct: 740 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 799
Query: 480 VLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV 539
VLKAEF +GKKEL VSLFQT+VL++FN+ ++ S ++IK ATGIED ELRRTLQSLACGK
Sbjct: 800 VLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKA 859
Query: 540 RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQV 599
RVL K PKG+D+ED D F+ N+ F L+RIK+N IQMKETVEE STTERVFQDRQYQ+
Sbjct: 860 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 919
Query: 600 DAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYN 659
DAAIVRIMK RK LSH LL++E++ QLKFP+KPADLKKRIESLIDR+Y+ERDK NP YN
Sbjct: 920 DAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYN 979
Query: 660 YLA 662
Y+A
Sbjct: 980 YIA 982
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 2076 (735.8 bits), Expect = 7.6e-215, P = 7.6e-215
Identities = 402/663 (60%), Positives = 509/663 (76%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ NLY+++ + CE+HI A I S D V+FL ++RCWQ+ C QM+MIR I L+LD
Sbjct: 309 ISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLD 368
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
RTYV Q + S+WDMGL+LFR ++ S +V+ KT+ G+L +IERER GEA+DR+LL L
Sbjct: 369 RTYVLQNSMLPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLLRSL 428
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY 180
L M + L IY +SFE+ FL+ T+ YAAEG K MQ+ +VP+YL HV RL EE +R + Y
Sbjct: 429 LSMLSDLQIYQDSFEQQFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITY 488
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLR 239
LD +T+K LIA+ E+QLL H++AIL KG L+D +R +DL +Y LFSRV ++ L
Sbjct: 489 LDQTTQKSLIASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLL 548
Query: 240 QALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
Q YI+ G IV++ EKDK MV LL+FK +D I + F KNE F N +K+AFE
Sbjct: 549 QQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFETF 608
Query: 300 INLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDL 359
IN R N+PAELIAK++D KLRAGNK ++EELE LDK++++FRFI GKDVFEAFYKKDL
Sbjct: 609 INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 668
Query: 360 AKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTK 419
AKRLL+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q +
Sbjct: 669 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN- 727
Query: 420 LPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHC 479
+P IE++V++LT GYWPTY PM+V LP E+ Q+IFK FYL K+SGR+L WQ++LGHC
Sbjct: 728 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 787
Query: 480 VLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV 539
VLKAEF +GKKEL VSLFQT+VL++FN+ ++ S ++IK ATGIED ELRRTLQSLACGK
Sbjct: 788 VLKAEFKEGKKELQVSLFQTMVLLMFNEGEEFSLEEIKHATGIEDGELRRTLQSLACGKA 847
Query: 540 RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQV 599
RVL K PKG+D+ED D F+ N+ F L+RIK+N IQMKETVEE STTERVFQDRQYQ+
Sbjct: 848 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 907
Query: 600 DAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYN 659
DAAIVRIMK RK LSH LL++E++ QLKFP+KPADLKKRIESLIDR+Y+ERDK NP YN
Sbjct: 908 DAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYN 967
Query: 660 YLA 662
Y+A
Sbjct: 968 YIA 970
>ZFIN|ZDB-GENE-041008-208 [details] [associations]
symbol:cul4b "cullin 4B" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-041008-208 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX004980
IPI:IPI00637421 Ensembl:ENSDART00000085295 ArrayExpress:F1R029
Bgee:F1R029 Uniprot:F1R029
Length = 885
Score = 2066 (732.3 bits), Expect = 8.7e-214, P = 8.7e-214
Identities = 405/664 (60%), Positives = 507/664 (76%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ LY+++ CE+HI A I + D V+FL +++CWQD C QM+MIR I L+LD
Sbjct: 223 ISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLD 282
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
RTYV Q + S+WDMGL+LFR Y+ S +V+ KT+ G+L +IERER GEAVDR+LL L
Sbjct: 283 RTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILLLIERERSGEAVDRSLLRSL 342
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY 180
L M + L IY +SFE+ FLE T+ YAAEG + MQ+ +VP+YL HV RL EE +R + Y
Sbjct: 343 LSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRVITY 402
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLR 239
LD ST+K LIAT E+QLL H++AIL KG L+D +R +DL +Y LFSRV ++ L
Sbjct: 403 LDQSTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 462
Query: 240 QALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
Q YI+ G IV++ EKDK MV LL+FK +D I + F KNE F N +K+AFE
Sbjct: 463 QHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDVCFMKNEKFVNGMKEAFETF 522
Query: 300 INLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFI-QGKDVFEAFYKKD 358
IN R N+PAELIAK++D KLRAGNK ++EELE LDK++++FRFI +GKDVFEAFYKKD
Sbjct: 523 INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYEGKDVFEAFYKKD 582
Query: 359 LAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQART 418
LAKRLL+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q +
Sbjct: 583 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQFKQHMQCQN 642
Query: 419 KLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGH 478
+P IE++V++LT GYWPTY PM+V LP E+ Q+IFK FYL K+SGR+L WQ++LGH
Sbjct: 643 -IPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKTFYLGKHSGRKLQWQSTLGH 701
Query: 479 CVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGK 538
CVLKAEF +GKKEL VSLFQT+VL++FN+ ++ S +DIK ATGIED ELRRTLQSLACGK
Sbjct: 702 CVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATGIEDSELRRTLQSLACGK 761
Query: 539 VRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQ 598
RVL K+PK +DVED D F N+ F L+RIK+N IQMKETVEE STTERVFQDRQYQ
Sbjct: 762 ARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQ 821
Query: 599 VDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIY 658
+DAAIVRIMK RK LSH LL++E++ QLKFP+KPADLKKRIESLIDR+Y+ERDK NP Y
Sbjct: 822 IDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQY 881
Query: 659 NYLA 662
NY+A
Sbjct: 882 NYVA 885
>UNIPROTKB|F1P2U1 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0051246 "regulation of
protein metabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:AADN02017929 EMBL:AADN02017930
EMBL:AADN02017931 IPI:IPI00587191 Ensembl:ENSGALT00000027171
Uniprot:F1P2U1
Length = 741
Score = 2039 (722.8 bits), Expect = 6.3e-211, P = 6.3e-211
Identities = 398/665 (59%), Positives = 503/665 (75%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSL--VGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALY 58
+ LY+++ + CE+H+ A I S D ++FL + +CWQD C QM+MIR I L+
Sbjct: 78 VSATLYKQLRQVCEDHVKAQILQFRCCTDSLDSLLFLKKINKCWQDHCRQMIMIRSIFLF 137
Query: 59 LDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLN 118
LDRTYV Q + S+WDMGL+LFR ++ S +V++KT+ G+L +IERER GEAVDR+LL
Sbjct: 138 LDRTYVLQNSMLPSIWDMGLELFRNHVISDKQVQNKTIDGILLLIERERSGEAVDRSLLR 197
Query: 119 HLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCL 178
LL M + L +Y ESFE+ FLE T+ YAAEG + MQ+ +VP+YL HV RL EE +R +
Sbjct: 198 SLLSMLSDLQVYKESFEQRFLEETNCLYAAEGQRLMQEREVPEYLHHVSKRLEEEGDRVI 257
Query: 179 LYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALES- 237
YLD ST+KPLIA E+QLL H++AIL KG L+D +R DL + Y LFSRV +
Sbjct: 258 TYLDHSTQKPLIACVEKQLLGEHLTAILQKGLDNLLDENRISDLTQTYQLFSRVKGGQQI 317
Query: 238 LRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFE 297
L Q + YI+ G IV++ EKDKDMV LL+FK +D I E F KNE F N +K++FE
Sbjct: 318 LLQHWSEYIKNFGTTIVVNPEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFE 377
Query: 298 YLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
IN R N+PAELIAK++D KLRAGNK ++EELE LDK++++FRFI GKDVFEAFYKK
Sbjct: 378 TFINKRPNKPAELIAKYVDSKLRAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYKK 437
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
DLAKRLL+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK++ FKQ Q +
Sbjct: 438 DLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQFKQYMQNQ 497
Query: 418 TKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
+ P I+++V++LT GYWPTY PM+V L E+ Q++FK FYL K+SGR+L WQ +LG
Sbjct: 498 SD-PGNIDLTVNILTMGYWPTYTPMEVHLNSEMIKLQEVFKTFYLGKHSGRKLQWQTTLG 556
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACG 537
H VLKAEF +GKKE VSLFQT+VL++FN+ + SF++IK ATGIED ELRRTLQSLACG
Sbjct: 557 HAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDEFSFEEIKMATGIEDSELRRTLQSLACG 616
Query: 538 KVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQY 597
K RVL K PKG+DVED D F+FN F L+RIK+N IQMKETVEE STTERVFQDRQY
Sbjct: 617 KARVLIKNPKGKDVEDGDKFIFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQY 676
Query: 598 QVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQI 657
Q+DAAIVRIMK RK L H LL++EL+ QLKFP+KP DLKKRIESLIDR+Y+ERDK+NP
Sbjct: 677 QIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQ 736
Query: 658 YNYLA 662
Y+Y+A
Sbjct: 737 YHYVA 741
>UNIPROTKB|Q13619 [details] [associations]
symbol:CUL4A "Cullin-4A" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0019048 GO:GO:0008285 GO:GO:0000082
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006511 GO:GO:0097193 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619 EMBL:AF077188
EMBL:AY365124 EMBL:AB178950 EMBL:AL136221 EMBL:BC008308
EMBL:AB012193 EMBL:U58090 IPI:IPI00419273 IPI:IPI00549919
RefSeq:NP_001008895.1 RefSeq:NP_003580.1 UniGene:Hs.339735 PDB:2HYE
PDB:4A0K PDBsum:2HYE PDBsum:4A0K ProteinModelPortal:Q13619
SMR:Q13619 DIP:DIP-31610N IntAct:Q13619 MINT:MINT-4532640
STRING:Q13619 PhosphoSite:Q13619 DMDM:108936013 PaxDb:Q13619
PRIDE:Q13619 DNASU:8451 Ensembl:ENST00000326335
Ensembl:ENST00000375440 Ensembl:ENST00000375441
Ensembl:ENST00000451881 GeneID:8451 KEGG:hsa:8451 UCSC:uc010agu.3
CTD:8451 GeneCards:GC13P113863 HGNC:HGNC:2554 MIM:603137
neXtProt:NX_Q13619 PharmGKB:PA27050 InParanoid:Q13619 OMA:KVSATLY
EvolutionaryTrace:Q13619 GenomeRNAi:8451 NextBio:31624
ArrayExpress:Q13619 Bgee:Q13619 CleanEx:HS_CUL4A
Genevestigator:Q13619 GermOnline:ENSG00000139842 GO:GO:0051246
Uniprot:Q13619
Length = 759
Score = 2036 (721.8 bits), Expect = 1.3e-210, P = 1.3e-210
Identities = 401/660 (60%), Positives = 500/660 (75%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
LY+++ + CE+H+ A I S D V+FL + CWQD C QM+MIR I L+LDRTYV
Sbjct: 102 LYKQLRQACEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYV 161
Query: 65 KQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMF 124
Q + S+WDMGL+LFR ++ S V+ KT+ G+L +IERER GEAVDR+LL LL M
Sbjct: 162 LQNSTLPSIWDMGLELFRTHIISDKMVQSKTIDGILLLIERERSGEAVDRSLLRSLLGML 221
Query: 125 TALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVS 184
+ L +Y +SFE FLE T+ YAAEG + MQ+ +VP+YL HV RL EE +R + YLD S
Sbjct: 222 SDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHS 281
Query: 185 TRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALA 243
T+KPLIA E+QLL H++AIL KG L+D +R DL +MY LFSRV ++L Q +
Sbjct: 282 TQKPLIACVEKQLLGEHLTAILQKGLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWS 341
Query: 244 MYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLR 303
YI+ G IV++ EKDKDMV LL+FK +D + E F KNE F N +K++FE IN R
Sbjct: 342 EYIKTFGTAIVINPEKDKDMVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFETFINKR 401
Query: 304 QNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRL 363
N+PAELIAK +D KLRAGNK ++EELE TLDK+++LFRFI GKDVFEAFYKKDLAKRL
Sbjct: 402 PNKPAELIAKHVDSKLRAGNKEATDEELERTLDKIMILFRFIHGKDVFEAFYKKDLAKRL 461
Query: 364 LLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSG 423
L+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q ++ SG
Sbjct: 462 LVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQSD--SG 519
Query: 424 -IEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLK 482
I+++V++LT GYWPTY PM+V L E+ Q++FK FYL K+SGR+L WQ +LGH VLK
Sbjct: 520 PIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKAFYLGKHSGRKLQWQTTLGHAVLK 579
Query: 483 AEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVL 542
AEF +GKKE VSLFQT+VL++FN+ SF++IK ATGIED ELRRTLQSLACGK RVL
Sbjct: 580 AEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVL 639
Query: 543 QKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAA 602
K PKG++VED D F+FN F L+RIK+N IQMKETVEE STTERVFQDRQYQ+DAA
Sbjct: 640 IKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAA 699
Query: 603 IVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
IVRIMK RK L H LL++EL+ QLKFP+KP DLKKRIESLIDR+Y+ERDK+NP Y+Y+A
Sbjct: 700 IVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA 759
>UNIPROTKB|F1Q284 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 CTD:8451 OMA:KVSATLY
EMBL:AAEX03013408 RefSeq:XP_849542.3 Ensembl:ENSCAFT00000010211
GeneID:607683 KEGG:cfa:607683 Uniprot:F1Q284
Length = 761
Score = 2023 (717.2 bits), Expect = 3.1e-209, P = 3.1e-209
Identities = 397/659 (60%), Positives = 498/659 (75%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
LY+++ + CE+H+ A I S D V+FL + CWQD C QM+MIR I L+LDRTYV
Sbjct: 104 LYKQLRQVCEDHVQAQILQFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYV 163
Query: 65 KQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMF 124
Q + S+WDMGL+LFR ++ S V+ K++ G+L +IERER GEAVDR+LL LL M
Sbjct: 164 LQNSMLPSIWDMGLELFRNHIISDKMVQSKSIDGILLLIERERNGEAVDRSLLRSLLSML 223
Query: 125 TALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVS 184
+ L +Y +SFE FLE T+ YAAEG + MQ+ +VP+YL HV RL EE +R + YLD S
Sbjct: 224 SDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHS 283
Query: 185 TRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALES-LRQALA 243
T+KPLIA E+QLL H++AIL KG L+D +R DL +MY LFSRV + L Q +
Sbjct: 284 TQKPLIACVEKQLLGEHLTAILHKGLDHLLDENRVPDLTQMYQLFSRVKGGQQILLQHWS 343
Query: 244 MYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLR 303
YI+ G IV++ EKDKDMV LL+FK +D + E F +NE F N +K++FE IN R
Sbjct: 344 EYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIEVCFQRNEKFINLMKESFETFINKR 403
Query: 304 QNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRL 363
N+PAELIAK +D KLRAGNK ++EELE LDKV+++FRFI GKDVFEAFYKKDLAKRL
Sbjct: 404 PNKPAELIAKHVDSKLRAGNKEATDEELERILDKVMIIFRFIHGKDVFEAFYKKDLAKRL 463
Query: 364 LLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSG 423
L+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q ++ P
Sbjct: 464 LVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQFKQYMQNQSD-PGS 522
Query: 424 IEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKA 483
I+++V++LT GYWPTY PM+V L E+ Q++FK FYL K+SGR+L WQ +LGH VLKA
Sbjct: 523 IDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKA 582
Query: 484 EFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQ 543
EF +GKKE VSLFQT+VL++FN+ SF++IK ATGIED ELRRTLQSLACGK RVL
Sbjct: 583 EFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLV 642
Query: 544 KLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAI 603
K PKG++VED D+F+FN F L+RIK+N IQMKETVEE STTERVFQDRQYQ+DAAI
Sbjct: 643 KSPKGKEVEDGDTFMFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAI 702
Query: 604 VRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
VRIMK RK L H LL++EL+ QLKFP+KP DLKKRIESLIDR+Y+ERDK+NP Y+Y+A
Sbjct: 703 VRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA 761
>MGI|MGI:1914487 [details] [associations]
symbol:Cul4a "cullin 4A" species:10090 "Mus musculus"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0051246 "regulation of protein metabolic process"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1914487 GO:GO:0019048 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0045732 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619
CTD:8451 EMBL:AK168215 EMBL:AK170722 EMBL:BC010211 IPI:IPI00321407
RefSeq:NP_666319.2 UniGene:Mm.212861 ProteinModelPortal:Q3TCH7
SMR:Q3TCH7 STRING:Q3TCH7 PhosphoSite:Q3TCH7 PaxDb:Q3TCH7
PRIDE:Q3TCH7 Ensembl:ENSMUST00000016680 GeneID:99375 KEGG:mmu:99375
UCSC:uc009kww.2 InParanoid:Q3TCH7 OMA:DREVPEY OrthoDB:EOG42FSH0
ChiTaRS:CUL4A NextBio:353901 Bgee:Q3TCH7 CleanEx:MM_CUL4A
Genevestigator:Q3TCH7 GermOnline:ENSMUSG00000031446 Uniprot:Q3TCH7
Length = 759
Score = 2020 (716.1 bits), Expect = 6.5e-209, P = 6.5e-209
Identities = 396/659 (60%), Positives = 497/659 (75%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
LY+++ + CE+H+ A I S D V+FL + CWQD C QM+MIR I L+LDRTYV
Sbjct: 102 LYKQLRQVCEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYV 161
Query: 65 KQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMF 124
Q + S+WDMGL+LFR ++ S V+ KT+ G+L +I RER GEAVDR+LL LL M
Sbjct: 162 LQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSML 221
Query: 125 TALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVS 184
+ L +Y +SFE FLE T+ YAAEG + MQ +VP+YL HV RL EE +R + YLD S
Sbjct: 222 SDLQVYKDSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHS 281
Query: 185 TRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALE-SLRQALA 243
T+KPLIA E+QLL H++AIL KG L+D +R DL +MY LFSRV + +L Q +
Sbjct: 282 TQKPLIACVEKQLLGEHLTAILQKGLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWS 341
Query: 244 MYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLR 303
YI+ G IV++ EKDKDMV LL+FK +D + E F +NE F N +K++FE IN R
Sbjct: 342 EYIKTFGTTIVINPEKDKDMVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFINKR 401
Query: 304 QNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRL 363
N+PAELIAK +D KLRAGNK ++EELE LDK+++LFRFI GKDVFEAFYKKDLAKRL
Sbjct: 402 PNKPAELIAKHVDSKLRAGNKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDLAKRL 461
Query: 364 LLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSG 423
L+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q ++ P
Sbjct: 462 LVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQSA-PGP 520
Query: 424 IEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKA 483
I+++V++LT GYWPTY PM+V LP E+ Q++FK FYL K+SGR+L WQ +LGH VLKA
Sbjct: 521 IDLTVNILTMGYWPTYTPMEVHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKA 580
Query: 484 EFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQ 543
+F +GKKE VSLFQT+VL++FN+ SF++IK ATGIED ELRRTLQSLACGK RVL
Sbjct: 581 DFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLI 640
Query: 544 KLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAI 603
K PKG++VED D F+FN F L+RIK+N IQMKETVEE STTERVFQDRQYQ+DAAI
Sbjct: 641 KSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAI 700
Query: 604 VRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
VRIMK RK L H LL++EL+ QLKFP+KP DLKKRIESLIDR+Y+ERDK++P Y+Y+A
Sbjct: 701 VRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDSPNQYHYVA 759
>UNIPROTKB|F1RN43 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:FP236214 Ensembl:ENSSSCT00000010475
Uniprot:F1RN43
Length = 761
Score = 2011 (713.0 bits), Expect = 5.8e-208, P = 5.8e-208
Identities = 395/659 (59%), Positives = 494/659 (74%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
LYQ++ + CE H+ A I + S D V FL + CWQD C QM+M+R I L+LDRTYV
Sbjct: 104 LYQQLREACESHVQAQILQVCTDSLDSVFFLKKINTCWQDHCRQMIMVRSIFLFLDRTYV 163
Query: 65 KQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMF 124
Q + S+WDMGL+LFR ++ S V+ KT+ G+L +I RER GEAVDR+LL LL M
Sbjct: 164 LQNSLLPSIWDMGLELFRSHVISDRMVQTKTIDGILLLIARERSGEAVDRSLLRGLLGML 223
Query: 125 TALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVS 184
+ L +Y +SFE FLE T+ YAAEG + MQ+ +VP+YL HV RL EE +R + YLD S
Sbjct: 224 SDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHS 283
Query: 185 TRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALA 243
T+KPLIA E+QLL H++AIL KG L+D +R DL +MY LFSRV ++L Q +
Sbjct: 284 TQKPLIACVEKQLLGEHLTAILQKGLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWS 343
Query: 244 MYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLR 303
YI+ G IV++ EKDKDMV LL+FK +D + + F +NE F N +K++FE IN R
Sbjct: 344 EYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIDVCFQRNEKFINLMKESFEAFINKR 403
Query: 304 QNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRL 363
N+PAELIAK +D KLRAGNK ++EELE LDKV+++FRFI GKDVFEAFYKKDLAKRL
Sbjct: 404 PNKPAELIAKHVDSKLRAGNKEATDEELERILDKVMIIFRFIHGKDVFEAFYKKDLAKRL 463
Query: 364 LLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSG 423
L+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q ++ P
Sbjct: 464 LVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQNQSD-PGS 522
Query: 424 IEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKA 483
I+++V++LT GYWPTY PMDV L E+ Q++FK FYL K+SGR+L WQ +LGH VLKA
Sbjct: 523 IDLTVNILTMGYWPTYTPMDVHLTPEMVKLQEVFKTFYLGKHSGRKLQWQTALGHAVLKA 582
Query: 484 EFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQ 543
EF +GKKE VSLFQT+VL++FN+ F++IK ATGIED ELRRTLQSLACGK RVL
Sbjct: 583 EFKEGKKEFQVSLFQTLVLLMFNEGDGFGFEEIKAATGIEDSELRRTLQSLACGKARVLI 642
Query: 544 KLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAI 603
K PKG++VED D F FN F L+RIK+N IQMKETVEE STTERVFQDRQYQ+DAAI
Sbjct: 643 KSPKGKEVEDGDKFFFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAI 702
Query: 604 VRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
VRIMK RK L H LL++EL+ QLKFP+KP DLKKRIESLIDR+Y+ERDK++P Y+Y+A
Sbjct: 703 VRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDSPNQYHYVA 761
>UNIPROTKB|F1N3S4 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:DAAA02034947 IPI:IPI00699975
Ensembl:ENSBTAT00000026769 Uniprot:F1N3S4
Length = 720
Score = 2010 (712.6 bits), Expect = 7.5e-208, P = 7.5e-208
Identities = 398/662 (60%), Positives = 498/662 (75%)
Query: 5 LYQRIEKECEEHISAAI---RSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
LYQ++ + CE H+ A I R S D V+FL + CWQD C QM+MIR I L+LDR
Sbjct: 60 LYQQLRQACEGHVQAQILQFRQPCTDSLDSVLFLKKMNTCWQDHCRQMIMIRSIFLFLDR 119
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLL 121
TYV Q + S+WDMGL+LFR ++ S V+ KT+ G+L +IERER GEAVDR+LL LL
Sbjct: 120 TYVLQNSTLPSIWDMGLELFRNHIISDKMVQTKTIDGILLLIERERSGEAVDRSLLRSLL 179
Query: 122 KMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYL 181
M + L +Y +SFE FLE T+ YAAEG + MQ+ +VP+YL HV RL EE +R + YL
Sbjct: 180 GMLSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLDHVSKRLEEEADRVITYL 239
Query: 182 DVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQ 240
D ST+KPLIA E+QLL H++AIL KG L+D +R DL +MY LFSRV ++L Q
Sbjct: 240 DHSTQKPLIACVEKQLLGEHLTAILQKGLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQ 299
Query: 241 ALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
+ YI+ G IV++ EKDKDMV LL+FK +D + + F ++E F N +K++FE I
Sbjct: 300 HWSDYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIDVCFQRSEKFVNLMKESFETFI 359
Query: 301 NLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLA 360
N R N+PAELIAK +D KLRAGNK ++EELE LDKV++LFRFI GKDVFEAFYKKDLA
Sbjct: 360 NKRPNKPAELIAKHVDSKLRAGNKEATDEELERMLDKVMILFRFIHGKDVFEAFYKKDLA 419
Query: 361 KRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKL 420
KRLL+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q ++
Sbjct: 420 KRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQNQSD- 478
Query: 421 PSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCV 480
P I+++V++LT GYWPTY PM+V L E+ Q++FK FYL K+SGR+L WQ +LGH V
Sbjct: 479 PGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAV 538
Query: 481 LKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVR 540
LKAEF +GKKE VSLFQT+VL++FN+ SF+DI+ ATGIED ELRRTLQSLACGK R
Sbjct: 539 LKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEDIRMATGIEDSELRRTLQSLACGKAR 598
Query: 541 VLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVD 600
VL K PKG++VED D F+FN F L+RIK+N IQMKETVEE STTERVFQDRQYQ+D
Sbjct: 599 VLLKSPKGKEVEDGDKFLFNAEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQID 658
Query: 601 AAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNY 660
AAIVRIMK RK L H LL++EL+ QLKFP+KP DLKKRIESLIDR+Y+ERDK++P Y+Y
Sbjct: 659 AAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDSPNQYHY 718
Query: 661 LA 662
+A
Sbjct: 719 VA 720
>RGD|1564494 [details] [associations]
symbol:Cul4b "cullin 4B" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1564494 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
IPI:IPI00362333 PRIDE:D3ZNZ7 Ensembl:ENSRNOT00000003523
UCSC:RGD:1564494 ArrayExpress:D3ZNZ7 Uniprot:D3ZNZ7
Length = 754
Score = 1063 (379.3 bits), Expect = 6.3e-203, Sum P(2) = 6.3e-203
Identities = 212/385 (55%), Positives = 278/385 (72%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ NLY+++ + CE+HI A I D V+FL ++RCWQ+ C QM+MIR I L+LD
Sbjct: 121 ISANLYKQLRQICEDHIKAQIHQFKTGFKDTVLFLKKIDRCWQNHCRQMIMIRSIFLFLD 180
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
RTYV Q + S+WDMGL+LFR ++ S +V+ KT+ G+L +IERER GEA+DR+LL L
Sbjct: 181 RTYVLQNSMLPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLLRSL 240
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY 180
L M + L IY +SFE+ FL+ T+ YAAEG K MQ+ +VP+YL HV RL EE +R + Y
Sbjct: 241 LNMLSDLQIYQDSFEQRFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITY 300
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLR 239
LD +T+K LIA+ E+QLL H++AIL KG L+D +R +DL +Y LFSRV ++ L
Sbjct: 301 LDQTTQKSLIASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLL 360
Query: 240 QALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
Q YI+ G IV++ EKDK MV LL+FK +D I + F KNE F N +K+AFE
Sbjct: 361 QHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFETF 420
Query: 300 INLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDL 359
IN R N+PAELIAK++D KLRAGNK ++EELE LDK++++FRFI GKDVFEAFYKKDL
Sbjct: 421 INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 480
Query: 360 AKRLLLGKSASIDAEKSMISKLKTE 384
AKRLL+GKSAS+DAEKSM+SKLK E
Sbjct: 481 AKRLLVGKSASVDAEKSMLSKLKHE 505
Score = 923 (330.0 bits), Expect = 6.3e-203, Sum P(2) = 6.3e-203
Identities = 172/270 (63%), Positives = 211/270 (78%)
Query: 393 LEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNV 452
L G ++ K + K +P IE++V++LT GYWPTY PM+V LP E+
Sbjct: 485 LVGKSASVDAEKSMLSKLKHEYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVK 544
Query: 453 YQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLS 512
Q+IFK FYL K+SGR+L WQ++LGHCVLKAEF +GKKEL VSLFQT+VL++FN+ ++ S
Sbjct: 545 LQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFS 604
Query: 513 FQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKV 572
++IK ATGIED ELRRTLQSLACGK RVL K PKG+D+ED D F+ N+ F L+RIK+
Sbjct: 605 LEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKI 664
Query: 573 NAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP 632
N IQMKETVEE STTERVFQDRQYQ+DAAIVRIMK RK LSH LL++E++ QLKFP+KP
Sbjct: 665 NQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP 724
Query: 633 ADLKKRIESLIDREYLERDKNNPQIYNYLA 662
ADLKKRIESLIDR+Y+ERDK NP YNY+A
Sbjct: 725 ADLKKRIESLIDRDYMERDKENPNQYNYIA 754
>FB|FBgn0033260 [details] [associations]
symbol:Cul-4 "Cullin-4" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0051533 "positive regulation of NFAT protein
import into nucleus" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007307 "eggshell chorion gene
amplification" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0051533 GO:GO:0006511 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0007307 GeneTree:ENSGT00550000074299
KO:K10609 OMA:FEDSLDF CTD:35780 EMBL:BT021374 EMBL:BT050475
RefSeq:NP_001163084.1 RefSeq:NP_610352.2 UniGene:Dm.4527 SMR:Q5BI50
IntAct:Q5BI50 STRING:Q5BI50 EnsemblMetazoa:FBtr0088821
EnsemblMetazoa:FBtr0301355 GeneID:35780 KEGG:dme:Dmel_CG8711
UCSC:CG8711-RA FlyBase:FBgn0033260 InParanoid:Q5BI50
OrthoDB:EOG4M0CGM GenomeRNAi:35780 NextBio:795178 Uniprot:Q5BI50
Length = 821
Score = 1899 (673.5 bits), Expect = 4.3e-196, P = 4.3e-196
Identities = 373/665 (56%), Positives = 480/665 (72%)
Query: 1 MGGNLYQRIEKECEEHISAAIR--SLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALY 58
M LY ++++ E+H+ I+ L G S D ++ L + W C QM+MIR I LY
Sbjct: 157 MDAQLYAKLKELTEQHVKRNIKLKELTGGSMDKLILLEKINHWWLSFCQQMIMIRSIFLY 216
Query: 59 LDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLN 118
+DRTYV Q V S+WDMGL LFR + + S V+ +TV GLL +IE+ER G VDR LL
Sbjct: 217 MDRTYVLQNSTVHSIWDMGLDLFRIHFAQNSVVQKRTVDGLLTLIEKERQGSTVDRGLLK 276
Query: 119 HLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCL 178
L++M L IY+ SFE+ FL+ T++ Y AE + MQ+ +VP+YL+HV RL EE+ER
Sbjct: 277 SLVRMLCDLQIYTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQHVNKRLAEENERLR 336
Query: 179 LYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALES 237
YLD ST+ PLI E++LL H+++IL KG L++ +R DL +Y L SRV N
Sbjct: 337 HYLDSSTKHPLIYNVEKELLAEHLTSILQKGLDSLLEDNRLSDLTLLYGLLSRVKNGTSE 396
Query: 238 LRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFE 297
L +I++ G IV+D EKDK MV LL+FK +D I F NE F N++++AFE
Sbjct: 397 LCGNFNGFIKKKGRTIVIDPEKDKSMVQDLLDFKDKMDVIVRTCFEHNEKFTNSLREAFE 456
Query: 298 YLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
+ IN R N+PAELIAK++D KLR+GNKGT++EELE TLDK++VLFRFI GKDVFEAFYKK
Sbjct: 457 FFINQRANKPAELIAKYVDMKLRSGNKGTTDEELEKTLDKIMVLFRFIHGKDVFEAFYKK 516
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
DLAKRLL+GKSAS+D+EKSM+SKLK ECG FT+KLEGMFKD+ELS++IN +F+ + +
Sbjct: 517 DLAKRLLVGKSASVDSEKSMLSKLKQECGGGFTSKLEGMFKDMELSRDINIAFRGHALSN 576
Query: 418 TKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
+ +++ V +LT GYWPTY P +V +P + Q IF +FYL K+SGR+L WQ +LG
Sbjct: 577 NRDVHNLDLCVSILTMGYWPTYAPTEVTMPPQFINPQQIFNKFYLEKHSGRKLQWQPTLG 636
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACG 537
+C+L+A+F G KEL VSLFQ +VL+LFND LS+++I AT IED ELRRTLQSLACG
Sbjct: 637 NCMLRAQFDAGPKELLVSLFQALVLLLFNDKPVLSYEEILAATLIEDGELRRTLQSLACG 696
Query: 538 KVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQY 597
+ RV+ K PKGR++ D D F FN FT L+RIK+N IQMKET EE +T ERVFQDRQY
Sbjct: 697 RARVITKTPKGREILDGDQFDFNNEFTNKLFRIKINQIQMKETNEEQKATEERVFQDRQY 756
Query: 598 QVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQI 657
Q+DAAIVRIMK RK LSH LLITELF QL FP+KPADLKKRIESLIDR+Y+ERDK+N
Sbjct: 757 QIDAAIVRIMKMRKTLSHNLLITELFNQLTFPVKPADLKKRIESLIDRDYMERDKDNQNQ 816
Query: 658 YNYLA 662
YNY+A
Sbjct: 817 YNYVA 821
>DICTYBASE|DDB_G0292794 [details] [associations]
symbol:culD "cullin D" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0292794 GO:GO:0005634 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AAFI02000196
InterPro:IPR016159 SUPFAM:SSF74788 KO:K10609 HSSP:Q9JLV5
OMA:FEDSLDF RefSeq:XP_629469.1 ProteinModelPortal:Q54CS2 SMR:Q54CS2
STRING:Q54CS2 EnsemblProtists:DDB0266743 GeneID:8628859
KEGG:ddi:DDB_G0292794 ProtClustDB:CLSZ2429365 Uniprot:Q54CS2
Length = 802
Score = 1372 (488.0 bits), Expect = 1.3e-176, Sum P(2) = 1.3e-176
Identities = 277/550 (50%), Positives = 385/550 (70%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLV-GQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYL 59
+ NLY +I + E+HI+ I+ LV S D ++FL + W+D +QM+MIR I LYL
Sbjct: 107 LASNLYNKISVQIEKHITLTIKHLVLTMSSDPIIFLKSINSIWKDHTNQMIMIRSIFLYL 166
Query: 60 DRTYVKQTPN-VRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLN 118
DRTYV Q N V+S+WD+GL F LS S +E KT+ LL I ER G+ +DR L++
Sbjct: 167 DRTYVIQNSNTVKSIWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIH 226
Query: 119 HLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCL 178
L+KM ++L IY++ FE F++ T+ FY EG + + + P YLK+V RL++E ER +
Sbjct: 227 SLVKMLSSLNIYTK-FEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLM 285
Query: 179 LYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALESL 238
YL+ ST+K L+A +RQL+ERH+ IL+KGF +++G R EDL ++Y L + V ++ +
Sbjct: 286 RYLEQSTKKQLMAVLDRQLIERHVDVILEKGFNAMVNGDRLEDLGKLYQLLNSVGEIKKI 345
Query: 239 RQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEY 298
+++ YI++TG ++ D+EK+ ++ LL++K LD I QSFSKNE +K++FEY
Sbjct: 346 KESWQSYIKQTGIQMLNDKEKEATLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEY 405
Query: 299 LINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKD 358
IN +QN+PAEL+A+F+D KL+ G K SEEELE L+K L+LFR+IQGKDVFEAFYK+D
Sbjct: 406 FINTKQNKPAELVARFIDSKLKVGGKRMSEEELETVLNKSLILFRYIQGKDVFEAFYKQD 465
Query: 359 LAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQART 418
L+KRLLL KS SIDAEKSMISKLKTECG+ FT KLE MFKDIELS +I SF+ S T
Sbjct: 466 LSKRLLLDKSTSIDAEKSMISKLKTECGTTFTAKLEEMFKDIELSNDIMNSFRDSPM--T 523
Query: 419 KLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGH 478
+ IEM+++VLT+G WP PP++ LP E YQ++F +FYLSK++G+ L WQN+L +
Sbjct: 524 QNFKSIEMNIYVLTSGNWPIQPPIEATLPKEFLEYQEVFNKFYLSKHNGKTLKWQNALSY 583
Query: 479 CVLKAEFPKGKKELAVSLFQTVVLMLFNDA---QKLSFQDIKDATGIEDKELRRTLQSLA 535
CVLKA F +GKKEL+VSLFQT++L LFND +LSF+DI+ TG+ EL++ L SL
Sbjct: 584 CVLKANFIQGKKELSVSLFQTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLC 643
Query: 536 CGKVRVL-QK 544
K +L QK
Sbjct: 644 SSKSDILIQK 653
Score = 365 (133.5 bits), Expect = 1.3e-176, Sum P(2) = 1.3e-176
Identities = 71/116 (61%), Positives = 90/116 (77%)
Query: 547 KGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRI 606
K + +++ D+F+FN F++ L++IKVN+IQ++ETVEEN T E + DRQYQVDAAIVRI
Sbjct: 687 KTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIVRI 746
Query: 607 MKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
MKTRK L+H LLI+EL LKF KP DLKKRIE LI++EYL RD N IYNY+A
Sbjct: 747 MKTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
>ZFIN|ZDB-GENE-040426-1357 [details] [associations]
symbol:cul4a "cullin 4A" species:7955 "Danio
rerio" [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0071600 "otic vesicle morphogenesis"
evidence=IMP] [GO:0035118 "embryonic pectoral fin morphogenesis"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 ZFIN:ZDB-GENE-040426-1357
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0035118 KO:K10609 HOVERGEN:HBG003619 CTD:8451 GO:GO:0071600
EMBL:BC054607 IPI:IPI00487530 RefSeq:NP_957321.1 UniGene:Dr.84245
ProteinModelPortal:Q7T2C1 SMR:Q7T2C1 STRING:Q7T2C1 GeneID:394002
KEGG:dre:394002 NextBio:20814969 Uniprot:Q7T2C1
Length = 635
Score = 1600 (568.3 bits), Expect = 2.1e-164, P = 2.1e-164
Identities = 310/550 (56%), Positives = 409/550 (74%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
LY+++ + CEEH+ A I +S D + FL + RCWQD C Q +MIR I L+LDRTYV
Sbjct: 87 LYKQLRQVCEEHVQAQIHQFREESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYV 146
Query: 65 KQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMF 124
Q + S+WD GL+LFR ++ S + V+ +TV G+L +ERER GE VDR+LL LL M
Sbjct: 147 LQNSLLPSIWDTGLELFRTHIVSDAAVQSRTVQGILEQVERERSGETVDRSLLRSLLGML 206
Query: 125 TALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVS 184
+ L +Y +SFE+ FL T+ YAAEG + MQ+ DVP+YL HV RL EE++R + YLD S
Sbjct: 207 SDLQVYKDSFEQRFLSETTRLYAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQS 266
Query: 185 TRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALA 243
T+KPLIAT E+QLL H++ IL KG L+D +R +L +Y LFS+V L +L Q+
Sbjct: 267 TQKPLIATVEKQLLGEHMTTILQKGLRTLLDENRVCELTLLYELFSKVKGGLTALLQSWR 326
Query: 244 MYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLR 303
YI+ G V E+D++MV LL+FK +D++ + F +NE+F N +K+AFE IN R
Sbjct: 327 EYIKSVGAETVCSPERDREMVQELLDFKDQMDSVTQSCFQRNESFINAMKEAFENFINQR 386
Query: 304 QNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRL 363
N+PAELIAK++D KLRAGNK +EEELE LDK++++FRFI GKDVFEAFYKKDLAKRL
Sbjct: 387 PNKPAELIAKYVDSKLRAGNKEATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRL 446
Query: 364 LLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSG 423
L+GKSAS+DAEKSM+SKLK ECG+ FT+KLEGMFKD+ELSK+I FKQ Q +T+ PS
Sbjct: 447 LVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQTE-PSN 505
Query: 424 IEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKA 483
IE++V++LT GYWP+Y PMDV LP E+ Q++FK FYL K+SGR+L WQ +LGH VLK
Sbjct: 506 IELTVNILTMGYWPSYTPMDVHLPAEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKT 565
Query: 484 EFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQ 543
EF +GKKEL VSLFQT+VL++FN++ + S ++I+ ATGIE+ EL+RTLQSLACGK RVL
Sbjct: 566 EFKEGKKELQVSLFQTLVLLMFNESDECSVEEIRVATGIEEGELKRTLQSLACGKARVLN 625
Query: 544 KLPKGRDVED 553
K P+G++VED
Sbjct: 626 KTPRGKEVED 635
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 1132 (403.5 bits), Expect = 5.5e-143, Sum P(2) = 5.5e-143
Identities = 246/559 (44%), Positives = 352/559 (62%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY ++K ++H+ A ++ V +S D L L W + MLMIR I +Y+DR
Sbjct: 66 GDLLYNNLKKMVDKHLKAVAKT-VSESIDEKFLLEL-NSSWINHKTSMLMIRDILMYMDR 123
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLL 121
YVKQ N+ S++D+GL LFR ++ S ++ + + LL M+++ER GE +DR L+ +++
Sbjct: 124 NYVKQN-NLSSVFDLGLYLFRDNVAHCSTIKDRLLNTLLSMVQKEREGEVIDRILIKNIV 182
Query: 122 KMFTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHER 176
+M LG+ Y E FEKP L TS Y A+ +Q PDY+K VEI L EE ER
Sbjct: 183 QMLIDLGVNSKNVYIEDFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEELER 242
Query: 177 CLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRVN 233
YLD S+ L E+QL+ H+ ++D G ++ + EDL+RMY+LFSRV+
Sbjct: 243 VSHYLDSSSEPKLKEVCEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVS 302
Query: 234 -ALESLRQALAMYIRRTGHGIVMDEEKDKDM---VSSLLEFKASLDTIWEQSFSKNEAFC 289
L ++ ++ Y++ G GIVMDEEK K+ SLL+ K D + + + ++ F
Sbjct: 303 DGLNLMKDVISSYVKEIGRGIVMDEEKTKESGTYFQSLLDLKDKYDNLLQNALYNDKQFI 362
Query: 290 NTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKD 349
++I+ AFEY INL P E I+ F+DEKL+ G KG SEEE++ LDK+L+LFR IQ KD
Sbjct: 363 HSIQQAFEYFINLNPKSP-EYISLFIDEKLKKGLKGVSEEEVDIILDKILMLFRLIQEKD 421
Query: 350 VFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINES 409
VFE +YK+ LAKRLLLG+S S DAE++MI+KLKTECG QFT+KLEGMF D+ LS++
Sbjct: 422 VFEKYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLSQDTMSG 481
Query: 410 FKQSSQARTK-LPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGR 468
FK Q K LP I+++VHVLTTG+WPT + LP E+ + + FK +YLS ++GR
Sbjct: 482 FKTYIQNLKKALP--IDLNVHVLTTGFWPTQNTANCNLPREILLCCEAFKSYYLSNHNGR 539
Query: 469 RLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELR 528
L+WQ ++G +KA FP EL VS +Q V+L+LFND KL+F++I D TGI +L+
Sbjct: 540 LLLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLK 599
Query: 529 RTLQSLACGKVRVLQK-LP 546
R L +L K ++L + LP
Sbjct: 600 RNLLALTNPKNKILDRELP 618
Score = 287 (106.1 bits), Expect = 5.5e-143, Sum P(2) = 5.5e-143
Identities = 56/116 (48%), Positives = 83/116 (71%)
Query: 549 RDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMK 608
+ +++ D F FN F + L+R+KV A+ KET E T ++V +DR++Q++A+IVRIMK
Sbjct: 654 KSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEEKETRDKVDEDRKHQIEASIVRIMK 713
Query: 609 TRKVLSHTLLITELFQQL--KFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
RK L H+ L++E+ +QL +F P +KKRIESLI+REYLER K + +IYNY+A
Sbjct: 714 ARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
>TAIR|locus:2205020 [details] [associations]
symbol:CUL3B "AT1G69670" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI;RCA] [GO:0009960 "endosperm
development" evidence=IGI] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009880
"embryonic pattern specification" evidence=RCA] [GO:0010072
"primary shoot apical meristem specification" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009793 GO:GO:0016567 GO:GO:0006511 GO:GO:0009960
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC013289
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
KO:K03869 ProtClustDB:CLSN2912776 EMBL:AJ344541 IPI:IPI00529547
PIR:E96718 RefSeq:NP_177125.3 UniGene:At.35390
ProteinModelPortal:Q9C9L0 SMR:Q9C9L0 IntAct:Q9C9L0 STRING:Q9C9L0
PRIDE:Q9C9L0 EnsemblPlants:AT1G69670.1 GeneID:843303
KEGG:ath:AT1G69670 TAIR:At1g69670 InParanoid:Q9C9L0 OMA:REMIANH
PhylomeDB:Q9C9L0 Genevestigator:Q9C9L0 Uniprot:Q9C9L0
Length = 732
Score = 1326 (471.8 bits), Expect = 2.3e-135, P = 2.3e-135
Identities = 280/675 (41%), Positives = 423/675 (62%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + H+ +S+ + FL L+ R W D + MIR I +Y+DR
Sbjct: 65 GDKLYTGLVTTMTFHLKEICKSI--EEAQGGAFLELLNRKWNDHNKALQMIRDILMYMDR 122
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLL 121
TYV T + ++GL L+R + S+++ + + LL ++ +ER GE +DR L+ +++
Sbjct: 123 TYVSTTKKTH-VHELGLHLWRDNVVYSSKIQTRLLNTLLDLVHKERTGEVIDRVLMRNVI 181
Query: 122 KMFTALG--IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLL 179
KMF LG +Y + FEKPFLE ++EFY E M++++ D +YLK E L EE ER +
Sbjct: 182 KMFMDLGESVYQDDFEKPFLEASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVERVVN 241
Query: 180 YLDVSTRKPLIATAERQLLERHISAIL---DKGFTMLMDGHRTEDLQRMYSLFSRV-NAL 235
YLD + + + ER+++ H+ ++ + G ++ + ED+ RMYSLF RV N L
Sbjct: 242 YLDAKSEAKITSVVEREMIANHVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVANGL 301
Query: 236 ESLRQALAMYIRRTGHGIVMDEEKDKD---MVSSLLEFKASLDTIWEQSFSKNEAFCNTI 292
++R + +++R G +V D EK KD V LL+ + D I +F+ ++ F N +
Sbjct: 302 VTVRDVMTLHLREMGKQLVTDPEKSKDPVEFVQRLLDERDKYDRIINMAFNNDKTFQNAL 361
Query: 293 KDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
+FEY +NL P E I+ F+D+KLR G KG EE+++ LDKV++LFR++Q KDVFE
Sbjct: 362 NSSFEYFVNLNTRSP-EFISLFVDDKLRKGLKGVGEEDVDLILDKVMMLFRYLQEKDVFE 420
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 412
+YK+ LAKRLL GK+ S DAE+++I KLKTECG QFT+KLEGMF D++ S + F
Sbjct: 421 KYYKQHLAKRLLSGKTVSDDAERNLIVKLKTECGYQFTSKLEGMFTDMKTSHDTLLGFYN 480
Query: 413 SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
S +L G + V VLTTG WPT P + LP E++V + F+ +YL ++GRRL W
Sbjct: 481 S---HPELSEGPTLVVQVLTTGSWPTQPTIQCNLPAEVSVLCEKFRSYYLGTHTGRRLSW 537
Query: 473 QNSLGHCVLKAEFPKGKK-ELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTL 531
Q ++G +KA F KG+K EL VS FQ VLMLFN++ +LS+++I+ AT I +L+R L
Sbjct: 538 QTNMGTADIKAVFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPTPDLKRCL 597
Query: 532 QSLACGKVR-VLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAI-QMKETVEENTSTTE 589
QS+AC K + VL+K P +++ ++D FV N+ F + Y++K+ + KET E T +
Sbjct: 598 QSMACVKGKNVLRKEPMSKEIAEEDWFVVNDRFASKFYKVKIGTVVAQKETEPEKQETRQ 657
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQL--KFPIKPADLKKRIESLIDREY 647
RV +DR+ Q++AAIVRIMK+R+VL H +I E+ +QL +F P ++KKRIESLI+R++
Sbjct: 658 RVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQTRFLANPTEIKKRIESLIERDF 717
Query: 648 LERDKNNPQIYNYLA 662
LERD + ++Y YLA
Sbjct: 718 LERDNTDRKLYRYLA 732
>TAIR|locus:2200670 [details] [associations]
symbol:CUL3 "AT1G26830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0009639 "response to red or far
red light" evidence=RCA;IMP] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI] [GO:0009960 "endosperm development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0009639
GO:GO:0009911 GO:GO:0006511 GO:GO:0009960 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC005508 EMBL:AC006535
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
EMBL:AJ319540 EMBL:AJ344252 EMBL:AK230392 IPI:IPI00528089
PIR:A86395 RefSeq:NP_174005.1 UniGene:At.27879
ProteinModelPortal:Q9ZVH4 SMR:Q9ZVH4 DIP:DIP-33568N IntAct:Q9ZVH4
STRING:Q9ZVH4 PaxDb:Q9ZVH4 PRIDE:Q9ZVH4 EnsemblPlants:AT1G26830.1
GeneID:839226 KEGG:ath:AT1G26830 TAIR:At1g26830 InParanoid:Q9ZVH4
KO:K03869 OMA:ATFYGPI PhylomeDB:Q9ZVH4 ProtClustDB:CLSN2912776
Genevestigator:Q9ZVH4 Uniprot:Q9ZVH4
Length = 732
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 275/643 (42%), Positives = 414/643 (64%)
Query: 34 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEH 93
FL + + W + + MIR I +Y+DRTY++ T + MGL L+R + ++++
Sbjct: 95 FLEELNKKWNEHNKALEMIRDILMYMDRTYIESTKKTH-VHPMGLNLWRDNVVHFTKIHT 153
Query: 94 KTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG--IYSESFEKPFLECTSEFYAAEGM 151
+ + LL ++++ER+GE +DR L+ +++KMF LG +Y E FEKPFL+ +SEFY E
Sbjct: 154 RLLNTLLDLVQKERIGEVIDRGLMRNVIKMFMDLGESVYQEDFEKPFLDASSEFYKVESQ 213
Query: 152 KYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAIL---DK 208
++++ D DYLK E RL EE ER YLD + + + + E++++ H+ ++ +
Sbjct: 214 EFIESCDCGDYLKKSEKRLTEEIERVAHYLDAKSEEKITSVVEKEMIANHMQRLVHMENS 273
Query: 209 GFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKD---MV 264
G ++ + EDL RMY+LF RV N L ++R + ++R G +V D EK KD V
Sbjct: 274 GLVNMLLNDKYEDLGRMYNLFRRVTNGLVTVRDVMTSHLREMGKQLVTDPEKSKDPVEFV 333
Query: 265 SSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNK 324
LL+ + D I +F ++ F N + +FEY INL P E I+ F+D+KLR G K
Sbjct: 334 QRLLDERDKYDKIINTAFGNDKTFQNALNSSFEYFINLNARSP-EFISLFVDDKLRKGLK 392
Query: 325 GTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTE 384
G ++ ++E LDKV++LFR++Q KDVFE +YK+ LAKRLL GK+ S DAE+S+I KLKTE
Sbjct: 393 GITDVDVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTE 452
Query: 385 CGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDV 444
CG QFT+KLEGMF D++ S++ F S +L G + V VLTTG WPT P +
Sbjct: 453 CGYQFTSKLEGMFTDMKTSEDTMRGFYGS---HPELSEGPTLIVQVLTTGSWPTQPAVPC 509
Query: 445 RLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKK-ELAVSLFQTVVLM 503
LP E++V + F+ +YL ++GRRL WQ ++G +KA F KG+K EL VS FQ VLM
Sbjct: 510 NLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCVLM 569
Query: 504 LFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVR-VLQKLPKGRDVEDDDSFVFNEG 562
LFN++ +LS+++I+ AT I +L+R LQSLAC K + V++K P +D+ ++D FV N+
Sbjct: 570 LFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKGKNVIKKEPMSKDIGEEDLFVVNDK 629
Query: 563 FTAPLYRIKVNAI-QMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITE 621
FT+ Y++K+ + KET E T +RV +DR+ Q++AAIVRIMK+RK+L H +I E
Sbjct: 630 FTSKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKILDHNNIIAE 689
Query: 622 LFQQL--KFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
+ +QL +F P ++KKRIESLI+R++LERD + ++Y YLA
Sbjct: 690 VTKQLQPRFLANPTEIKKRIESLIERDFLERDSTDRKLYRYLA 732
>UNIPROTKB|I3L5M8 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000028601 OMA:PRQLRNT Uniprot:I3L5M8
Length = 328
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 230/328 (70%), Positives = 278/328 (84%)
Query: 335 LDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLE 394
LDK++++FRFI GKDVFEAFYKKDLAKRLL+GKSAS+DAEKSM+SKLK ECG+ FT+KLE
Sbjct: 2 LDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLE 61
Query: 395 GMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQ 454
GMFKD+ELSK+I FKQ Q + +P IE++V++LT GYWPTY PM+V LP E+ Q
Sbjct: 62 GMFKDMELSKDIMIQFKQYMQNQN-VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQ 120
Query: 455 DIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQ 514
+IFK FYL K+SGR+L WQ++LGHCVLKAEF +GKKEL VSLFQT+VL++FN+ ++ S +
Sbjct: 121 EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLE 180
Query: 515 DIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNA 574
+IK ATGIED ELRRTLQSLACGK RVL K PKG+D+ED D F+ N+ F L+RIK+N
Sbjct: 181 EIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQ 240
Query: 575 IQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD 634
IQMKETVEE STTERVFQDRQYQ+DAAIVRIMK RK LSH LL++E++ QLKFP+KPAD
Sbjct: 241 IQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPAD 300
Query: 635 LKKRIESLIDREYLERDKNNPQIYNYLA 662
LKKRIESLIDR+Y+ERDK NP YNY+A
Sbjct: 301 LKKRIESLIDRDYMERDKENPNQYNYIA 328
>FB|FBgn0261268 [details] [associations]
symbol:Cul-3 "Cullin-3" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=NAS]
[GO:0001745 "compound eye morphogenesis" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=IPI] [GO:0007291 "sperm individualization"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IMP] [GO:0030431 "sleep"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045187 "regulation of circadian sleep/wake cycle, sleep"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014134 GO:GO:0030431 GO:GO:0030162 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0048813 GO:GO:0006919 GO:GO:0007291
GO:GO:0007409 GO:GO:0045475 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0007476 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031463 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0001745 KO:K03869 CTD:34896
OMA:YRTESEN EMBL:BT133182 RefSeq:NP_723909.2 UniGene:Dm.18043
SMR:Q8IP45 IntAct:Q8IP45 EnsemblMetazoa:FBtr0302159 GeneID:34896
KEGG:dme:Dmel_CG42616 UCSC:CG31829-RA FlyBase:FBgn0261268
OrthoDB:EOG43R22K ChiTaRS:Cul-3 GenomeRNAi:34896 NextBio:790768
Uniprot:Q8IP45
Length = 934
Score = 880 (314.8 bits), Expect = 5.1e-123, Sum P(2) = 5.1e-123
Identities = 197/504 (39%), Positives = 286/504 (56%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R+ V ++ FL + + W D M+MIR I +Y+DR
Sbjct: 229 GNRLYYGLREVVSEHLEHKVRADVLEALHSN-FLPKLNQAWTDHQTSMVMIRDILMYMDR 287
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLL 121
YV+Q V +++++GL LFR + YSE++ LL M+ ER GEA++ + +
Sbjct: 288 VYVQQR-EVDNVYNLGLILFRDQVVRYSEIQKALREKLLGMVMEERHGEAINHLAIKNAC 346
Query: 122 KMFTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHER 176
M LGI Y E FEKPFL ++ FY E ++ +++ Y+K VE R+ EE R
Sbjct: 347 SMLITLGINSRTVYEEDFEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVEARITEESSR 406
Query: 177 CLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRVN 233
LYLD T ++ E +L+++H+ I++ G ++ +TEDL Y LFSR+
Sbjct: 407 AALYLDKDTEPRIVRVVEEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTYKLFSRLK 466
Query: 234 --ALESLRQALAMYIRRTGHGIVMDEEKDKD----MVSSLLEFKASLDTIWEQSFSKNEA 287
L+ + ++ Y+R G +V +EE V +LL+ K D SF+ +
Sbjct: 467 EEGLKVIADTMSAYLREQGRMLVKEEENGNTNPITFVQNLLDLKDRFDQFLVHSFANDRI 526
Query: 288 FCNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQG 347
F N I FE+ +NL P E ++ F+D+KL+ G KG SE+E+E LDK +VLFRF+
Sbjct: 527 FKNVISSDFEHFLNLNNKSP-EYLSLFIDDKLKKGGKGMSEQEIESILDKTMVLFRFLLE 585
Query: 348 KDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEIN 407
KDVFE +YK LAKRLLL KS S D EK+MISKLKTECG QFT+KLEGMFKD+ +S I
Sbjct: 586 KDVFERYYKTHLAKRLLLNKSVSDDFEKNMISKLKTECGCQFTSKLEGMFKDMSVSNTIM 645
Query: 408 ESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPM-DVRLPHELNVYQDIFKEFYLSKYS 466
+ FK G+E++V +LTTG+WPT + +P DIFK FYL+K+S
Sbjct: 646 DEFKNFVNNNNLSLGGVELTVRILTTGFWPTQTATPNCNIPAAPREAFDIFKNFYLNKHS 705
Query: 467 GRRLMWQNSLGHCVLKAEFPKGKK 490
GR+L Q +G + A F G+K
Sbjct: 706 GRQLTLQPQMGTAYINAVF-YGRK 728
Score = 350 (128.3 bits), Expect = 5.1e-123, Sum P(2) = 5.1e-123
Identities = 78/181 (43%), Positives = 115/181 (63%)
Query: 489 KKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV--RVLQK-- 544
K L VS +Q VL+LFN+ L++ DI T I ++EL R LQSL+ GK R+L +
Sbjct: 754 KHILQVSTYQMCVLLLFNNRDVLTYDDIHQETDIPERELVRALQSLSMGKPAQRLLVRNS 813
Query: 545 LPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK-ETVEENTSTTERVFQDRQYQVDAAI 603
K +D+E D F N+ F + +R+K+ + K E+ E T +V +DR+++++AAI
Sbjct: 814 KTKTKDIEPTDEFYVNDAFNSKFHRVKIQTVAAKGESEPERKETRGKVDEDRKHEIEAAI 873
Query: 604 VRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLIDREYLERDKNNPQIYNYL 661
VRIMK RK L+H LL++++ QLK F P +KKRIE LI+REYL+R + ++YNYL
Sbjct: 874 VRIMKARKRLAHNLLVSDVTSQLKSRFLPSPVFIKKRIEGLIEREYLQRSPEDRKVYNYL 933
Query: 662 A 662
A
Sbjct: 934 A 934
Score = 38 (18.4 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 245 YIRRTGHGI-VMDEEKDKDMVSS 266
YI +G ++ EKDKD SS
Sbjct: 719 YINAVFYGRKAVESEKDKDAPSS 741
>ASPGD|ASPL0000052453 [details] [associations]
symbol:culD species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043494 "CLRC ubiquitin ligase complex"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031048
"chromatin silencing by small RNA" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0045836 "positive regulation of meiosis" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:BN001308 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176712 OMA:FEDSLDF EnsemblFungi:CADANIAT00002720
Uniprot:C8VRE7
Length = 880
Score = 902 (322.6 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 185/375 (49%), Positives = 257/375 (68%)
Query: 306 RPAELIAKFLDEKLRAG----------NKGTSEE--ELEGTLDKVLVLFRFIQGKDVFEA 353
+ E+IAK++D LR G N ++E E+ LD+VL LFRF+ GK VFEA
Sbjct: 510 KTGEMIAKYVDRLLRGGWRLAPTREAENMPLADEDAEINRQLDQVLDLFRFVHGKAVFEA 569
Query: 354 FYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQS 413
FYK DLA+RLL+G+SAS DAEKSM+++LKTECGS FT+ LE MFKD+E++++ ++
Sbjct: 570 FYKNDLARRLLMGRSASDDAEKSMLARLKTECGSSFTHNLESMFKDMEVARDEMSAYNSI 629
Query: 414 SQAR-TKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
+ R T LP +++ V VL+ WPTYP + VR+P E+ F++FY +KY+GR+L W
Sbjct: 630 KRERQTPLP--VDLHVSVLSASAWPTYPDVQVRIPPEIATAISDFEKFYDTKYNGRKLAW 687
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQK---LSFQDIKDATGIEDKELRR 529
++ L HC L+A FP G KEL VS FQ +VL+LFN+ + L+++ I++AT + D+EL R
Sbjct: 688 KHQLAHCQLRARFPNGNKELVVSSFQAIVLLLFNELPEGGTLNYRQIQEATTLSDQELTR 747
Query: 530 TLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
TLQSLAC K RVL K PKGRDV D F +N FT P +RIK+N IQ+KET EEN +T E
Sbjct: 748 TLQSLACAKYRVLSKKPKGRDVSPTDEFSYNASFTDPKFRIKINQIQLKETKEENKTTHE 807
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFP--IKPADLKKRIESLIDREY 647
RV DR Y+ AAIVRIMK+RK ++H L+ E+ + + ++PAD+KK IE LI+++Y
Sbjct: 808 RVAADRHYETQAAIVRIMKSRKTITHAELVAEVIKATRSRGVLEPADIKKNIEKLIEKDY 867
Query: 648 LERDKNNPQIYNYLA 662
+ER+ N Y Y+A
Sbjct: 868 MEREDGNR--YQYVA 880
Score = 322 (118.4 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 101/355 (28%), Positives = 184/355 (51%)
Query: 5 LYQRIEKECEEHISAAIR-SLVGQSP---DLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
L +R+++ C +H++ + SLV ++ ++ S+VE W++ ++ +R I YLD
Sbjct: 193 LAKRLQERCRQHVTGKLHGSLVDKAQMAYNIETLRSVVE-AWKEWQSMLITVRWIFYYLD 251
Query: 61 RTYV---KQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGE---AVDR 114
++++ K+ P +R +MGLQ FR+++ S ++ K + G ++ +R E D
Sbjct: 252 QSFLLHSKEHPVIR---EMGLQQFRQHIYSDPTLQEKILQGACDLVSADRSDENGIVADS 308
Query: 115 TLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYL-KHVEI--RLH 171
+LL + +++F +L +Y FE + + +F++ + QQ + YL +VE RL
Sbjct: 309 SLLRNAIELFHSLDVYVSGFEPVLVSGSKDFFSL----WAQQ-EATGYLASYVENSHRLI 363
Query: 172 E-EHERCLLY-LDVSTRKPLIATAERQLLERHISAILDKG--FTMLMDGHRTEDLQRMYS 227
E E RC + + +T++ L + ++ L+ S +L + +L G++ L ++Y+
Sbjct: 364 EREMNRCEQFSFNRTTKQKLSESLDQTLVTDQESVLLSQKDVLGLLRIGNKIA-LGQLYT 422
Query: 228 LFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEA 287
L R + L+ A + YI G GIV DE + DMV LL FK LD IW +SF +NE
Sbjct: 423 LLERRDLGAKLKGAFSTYIVEEGTGIVFDES-EADMVVRLLSFKKQLDDIWNESFRRNEG 481
Query: 288 FCNTIKDAFEYLINLRQNRPA----------ELIAKFLDEKLRAGNKGTSEEELE 332
+ ++++FE +N + A E+IAK++D LR G + E E
Sbjct: 482 LGHALRESFESFMNKGRKSDATGGTDNPKTGEMIAKYVDRLLRGGWRLAPTREAE 536
>UNIPROTKB|F1RUC1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:CU693400
Ensembl:ENSSSCT00000013782 OMA:SSTERED Uniprot:F1RUC1
Length = 700
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 214/383 (55%), Positives = 279/383 (72%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ NLY+++ + CE+HI A I S D V+FL ++RCWQ+ C QM+MIR I L+LD
Sbjct: 305 ISANLYKQLRQICEDHIKAQIHQFREYSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLD 364
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
RTYV Q + S+WDMGL+LFR ++ S +V++KT+ G+L +IERER GEA+DR+LL L
Sbjct: 365 RTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSL 424
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLY 180
L M + L IY +SFE+ FLE T+ YAAEG K MQ+ +VP+YL HV RL EE +R + Y
Sbjct: 425 LSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITY 484
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLR 239
LD +T+K LIAT E+QLL H++AIL KG L+D +R +DL +Y LFSRV ++ L
Sbjct: 485 LDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 544
Query: 240 QALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
Q YI+ G IV++ EKDK MV LL+FK +D I + F KNE F N +K+AFE
Sbjct: 545 QQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETF 604
Query: 300 INLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDL 359
IN R N+PAELIAK++D KLRAGNK ++EELE LDK++++FRFI GKDVFEAFYKKDL
Sbjct: 605 INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 664
Query: 360 AKRLLLGKSASIDAEKSMISKLK 382
AKRLL+GKSAS+DAEKSM+SKLK
Sbjct: 665 AKRLLVGKSASVDAEKSMLSKLK 687
>POMBASE|SPAC3A11.08 [details] [associations]
symbol:pcu4 "cullin 4" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007535 "donor selection" evidence=TAS]
[GO:0008156 "negative regulation of DNA replication" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
[GO:0031048 "chromatin silencing by small RNA" evidence=IMP]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=IMP] [GO:0031618
"nuclear centromeric heterochromatin" evidence=TAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IGI] [GO:0043494 "CLRC
ubiquitin ligase complex" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IGI] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC3A11.08 GO:GO:0005829 EMBL:CU329670
GO:GO:0034613 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0030466 GO:GO:0000122
GO:GO:0030702 GO:GO:0000070 GO:GO:0006348 GO:GO:0031048
GO:GO:0051570 GO:GO:0004842 GO:GO:0045836 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 GO:GO:0031507
GO:GO:0031618 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0006283
GO:GO:0007535 KO:K10609 GO:GO:0043494 EMBL:AB017029 EMBL:AB027893
PIR:T43408 RefSeq:NP_594195.1 ProteinModelPortal:O14122
IntAct:O14122 STRING:O14122 EnsemblFungi:SPAC3A11.08.1
GeneID:2543116 KEGG:spo:SPAC3A11.08 OMA:EREDNDI OrthoDB:EOG4DNJCJ
NextBio:20804143 Uniprot:O14122
Length = 734
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 226/636 (35%), Positives = 363/636 (57%)
Query: 36 SLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKT 95
++V CW +++ +++ I Y+D+T++ P+ ++ ++ L LFR+ L + ++
Sbjct: 105 TVVVGCWNKWLERVEIVQNIFYYMDKTFLSHHPDYPTIEELSLSLFREKLMAVKNIQIPF 164
Query: 96 VTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQ 155
+ LL+ E ++ D L + M +YS F +L S FY E + +Q
Sbjct: 165 LNSLLQSFENLHSSKSTDHAYLQDAMLMLHRTEMYSSVFVPMYLVMLSRFYDTESSQKIQ 224
Query: 156 QSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMD 215
+ + +YL++ L E + V +K + T +R L+ H+ L KG + ++
Sbjct: 225 ELPLEEYLEYAMSSLEREDAYVEKFDIVRDKKSIRETVQRCLITSHLDT-LTKGISQFIE 283
Query: 216 GHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLD 275
+ +Y+L + E L Q + + G +V DE KD +V LL F L
Sbjct: 284 KRDAHSCKLLYALLQFNHETEYLIQPWSDCLVDVGFKLVNDESKDDTLVQELLSFHKFLQ 343
Query: 276 TIWEQSFSKNEAFCNTIKDAFEYLIN----LRQNRPAELIAKFLDEKLRAGNKGTSEEEL 331
+ ++SF +E ++ AFE IN ++ PA LIAK++D LR G + + + L
Sbjct: 344 VVVDESFLHDETLSYAMRKAFETFINGAKGSQREAPARLIAKYIDYLLRVGEQASGGKPL 403
Query: 332 EGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTN 391
+ ++L LFR+I KD+FEA+YK D+AKRLLL KSAS E ++ LK CGSQFT+
Sbjct: 404 KEVFSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCGSQFTH 463
Query: 392 KLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELN 451
LEGMF+D+ +SKE SF+ S A L ++ V+VL+ YWP+YP +RLP ++
Sbjct: 464 SLEGMFRDVNISKEFTSSFRHSKAAHN-LHR--DLYVNVLSQAYWPSYPESHIRLPDDMQ 520
Query: 452 VYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--- 508
D F++FYLSK G+++ W SLGHC++KA FP G KEL++SLFQ VL+ FN+
Sbjct: 521 QDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKELSISLFQACVLLQFNNCLGG 580
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLY 568
+ +S+QD+K +T + D +L RTLQSL+C ++R L +PK + D F NE FT LY
Sbjct: 581 EGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEKFTDKLY 640
Query: 569 RIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK- 627
R+K+N I +KE +EN+ E+V +DRQ+++ A+IVR+MK ++ + H L+ + +K
Sbjct: 641 RVKINQIYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKD 700
Query: 628 --FPIKPADLKKRIESLIDREYLERDKNNPQIYNYL 661
P+ +D+K IE L+++EYLER+ N+ IY Y+
Sbjct: 701 RGIPLV-SDVKTAIEKLLEKEYLEREDND--IYTYV 733
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 772 (276.8 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 165/409 (40%), Positives = 246/409 (60%)
Query: 259 KDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN--LRQNRPAELIAKFLD 316
+++ ++ ++E + F + F +K+AFE N + + AEL+A F D
Sbjct: 334 QEQVLIRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCD 393
Query: 317 EKLR-AGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEK 375
L+ G++ S+E +E TL+KV+ L +I KD+F FY+K LA+RLL +SA+ D E+
Sbjct: 394 NILKKGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHER 453
Query: 376 SMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGY 435
S+++KLK +CG QFT+K+EGM D+ L++E SF+ + GI+++V VLTTG+
Sbjct: 454 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLGSNPAANPGIDLTVTVLTTGF 513
Query: 436 WPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVS 495
WP+Y D+ LP E+ ++FK FY +K R+L W SLG C + +F + EL VS
Sbjct: 514 WPSYKSFDINLPSEMIKCVEVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVS 573
Query: 496 LFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDD 555
+Q VL+LFN KLS+ +I + ++L R L SL+C K ++L K P + V +D
Sbjct: 574 TYQAAVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQND 633
Query: 556 SFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
+F FN FT + RIK+ V+E E V +DR+Y +DAAIVRIMK+RKVL H
Sbjct: 634 AFEFNSKFTDRMRRIKIPL----PPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGH 689
Query: 616 TLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYLA 662
L++E +QL KP +KKR+E LI R+YLERDK NP ++ YLA
Sbjct: 690 QQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
Score = 281 (104.0 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 72/266 (27%), Positives = 136/266 (51%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIA---LYLDR 61
LY + + EE+I++ + + + D + L +R W + +M+R ++ YLDR
Sbjct: 62 LYDKYREAFEEYINSTVLPALREKHDEFMLRELFKR-WSN---HKVMVRWLSRFFYYLDR 117
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLL 121
++ + ++ L ++GL FR + Y+E+ K ++ ++++ER GE +DR LL ++L
Sbjct: 118 YFIARR-SLPPLNEVGLTCFRDLV--YNELHSKVKQAVIALVDKEREGEQIDRALLKNVL 174
Query: 122 KMFTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHER 176
++ +G+ Y E FE L+ TS +Y+ + ++Q+ PDY+ E L +E ER
Sbjct: 175 DIYVEIGMGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERER 234
Query: 177 CLLYLDVSTRKPLIATAERQLLERHISAILDK---GFTMLMDGHRTEDLQRMYSLFSRV- 232
YL S+ L+ + +LL S +L+K G L+ + +DL RMY L+ ++
Sbjct: 235 VAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKIL 294
Query: 233 NALESLRQALAMYIRRTGHGIVMDEE 258
LE + ++ G+ +V E
Sbjct: 295 RGLEPVANIFKQHVTAEGNALVQQAE 320
Score = 45 (20.9 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 27/135 (20%), Positives = 52/135 (38%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESF 134
D QL+ KY ++ E + TV LR E D +L L K ++ +
Sbjct: 57 DYSQQLYDKYREAFEEYINSTVLPALR--------EKHDEFMLRELFKRWSNHKVMVRWL 108
Query: 135 EKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAE 194
+ F F A + + + + + V LH + ++ ++ L R+ +
Sbjct: 109 SRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREG--EQID 166
Query: 195 RQLLERHISAILDKG 209
R LL+ + ++ G
Sbjct: 167 RALLKNVLDIYVEIG 181
>POMBASE|SPAC24H6.03 [details] [associations]
symbol:cul3 "cullin 3" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
PomBase:SPAC24H6.03 GO:GO:0005829 GO:GO:0007346 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
EMBL:AB017028 PIR:S62405 PIR:T38359 PIR:T43406 RefSeq:NP_592949.1
ProteinModelPortal:Q09760 IntAct:Q09760 STRING:Q09760
EnsemblFungi:SPAC24H6.03.1 GeneID:2542637 KEGG:spo:SPAC24H6.03
OMA:DEFRQHI OrthoDB:EOG48H0BR NextBio:20803686 Uniprot:Q09760
Length = 785
Score = 755 (270.8 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 168/409 (41%), Positives = 249/409 (60%)
Query: 264 VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGN 323
V +L L+TI + + + N++ DAF ++ R E I+ F+D+ L+
Sbjct: 379 VQKVLALWDRLNTIISTTMDADRSILNSLSDAFVTFVD-GYTRAPEYISLFIDDNLKKDA 437
Query: 324 KGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKT 383
+ E +E TL + LFRFI KDVFE +YK LAKRLL +S S DAE MIS+LK
Sbjct: 438 RKAIEGSIEATLQNSVTLFRFISEKDVFEKYYKTHLAKRLLNNRSISSDAELGMISRLKQ 497
Query: 384 ECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPT-YPPM 442
E G+ FT KLEGMF D+ LS+E+ + +K +S ++ P+ ++++V +L + +WP P
Sbjct: 498 EAGNVFTQKLEGMFNDMNLSQELLQEYKHNSALQSAKPA-LDLNVSILASTFWPIDLSPH 556
Query: 443 DVR--LPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTV 500
++ P L D F +FYLSK++GR+L+W S+G ++ F K +L VS +V
Sbjct: 557 KIKCNFPKVLLAQIDQFTDFYLSKHTGRKLLWYPSMGSADVRVNFKDRKYDLNVSTIASV 616
Query: 501 VLMLFNDAQK---LSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSF 557
+L+LF D ++ L F++I + T IE +L+R LQSLAC K ++L K PKGR+V D F
Sbjct: 617 ILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSLACAKYKILLKDPKGREVNAGDKF 676
Query: 558 VFNEGFTAPLYRIKVNAI-QMK-ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
FNE F + L RIK++ + Q + E E T E+V + R++Q DA IVR+MK RKV H
Sbjct: 677 YFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEH 736
Query: 616 TLLITELFQQL--KFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
L+ E+ +QL +F P +K+RIE+LI+REYL+R +N +IY YLA
Sbjct: 737 NQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
Score = 296 (109.3 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 87/289 (30%), Positives = 138/289 (47%)
Query: 34 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKY--LSSYSEV 91
FLS + W+D M MI + YLD+ Y K V + + G+ +FR+ L+S+ E+
Sbjct: 121 FLSSLVNSWKDHIVSMQMISSVLKYLDKVYSKSADKV-PVNENGIYIFREVVLLNSF-EI 178
Query: 92 EHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-------IYSESFEKPFLECTSE 144
K V +L ++ ER G ++R L+N L M +L +Y F FL T
Sbjct: 179 GEKCVETILILVYLERKGNTINRPLINDCLDMLNSLPSENKKETLYDVLFAPKFLSYTRN 238
Query: 145 FYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA 204
FY E + V +YLK E R EE ER YL PL++ E +LL +H+
Sbjct: 239 FYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASPLLSVVEDELLSKHLDD 298
Query: 205 ILDK---GFTMLMDGHRTEDLQRMYSLFSRVN-ALESLRQALAMYIRRTGHGIVMDEEKD 260
+L+ GF ++D E LQ +Y FSRV ++SL++ LA Y+ HG +++E
Sbjct: 299 LLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLAKYVAH--HGKLINETTS 356
Query: 261 KDMVSSL----LEFKASLDTIWEQS----FSKNEAFCNTIKDAFEYLIN 301
+ + + L A++ T+W Q + + +T DA ++N
Sbjct: 357 QALEGKMAVGRLSSNATMATLWVQKVLALWDRLNTIISTTMDADRSILN 405
>UNIPROTKB|K7GPT4 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF75632
GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000035259 Uniprot:K7GPT4
Length = 278
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 189/278 (67%), Positives = 230/278 (82%)
Query: 385 CGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDV 444
CG+ FT+KLEGMFKD+ELSK+I FKQ Q + +P IE++V++LT GYWPTY PM+V
Sbjct: 2 CGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQN-VPGNIELTVNILTMGYWPTYVPMEV 60
Query: 445 RLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLML 504
LP E+ Q+IFK FYL K+SGR+L WQ++LGHCVLKAEF +GKKEL VSLFQT+VL++
Sbjct: 61 HLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLM 120
Query: 505 FNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFT 564
FN+ ++ S ++IK ATGIED ELRRTLQSLACGK RVL K PKG+D+ED D F+ N+ F
Sbjct: 121 FNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFK 180
Query: 565 APLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQ 624
L+RIK+N IQMKETVEE STTERVFQDRQYQ+DAAIVRIMK RK LSH LL++E++
Sbjct: 181 HKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYN 240
Query: 625 QLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
QLKFP+KPADLKKRIESLIDR+Y+ERDK NP YNY+A
Sbjct: 241 QLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA 278
>WB|WBGene00000839 [details] [associations]
symbol:cul-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0002009 GO:GO:0040010 GO:GO:0006260
GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0040035 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 EMBL:FO080734 EMBL:U58086
PIR:T16367 RefSeq:NP_495525.2 ProteinModelPortal:Q17392 SMR:Q17392
IntAct:Q17392 STRING:Q17392 PaxDb:Q17392 EnsemblMetazoa:F45E12.3
GeneID:174198 KEGG:cel:CELE_F45E12.3 UCSC:F45E12.3 CTD:35780
WormBase:F45E12.3 InParanoid:Q17392 OMA:ERIFCSS NextBio:882965
Uniprot:Q17392
Length = 840
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 228/649 (35%), Positives = 363/649 (55%)
Query: 34 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPN-VRSLWDMGLQLFRK--YLSSYSE 90
+L + WQ ++ +IR I L+LDR + T + LW+ +Q+F+K + + + E
Sbjct: 196 YLEKFGQIWQAYPVKINLIRNIFLHLDRIALGATDTEILPLWECFMQIFQKTFFPNIFKE 255
Query: 91 VEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEG 150
+ + L M ++ + + L L+ M + + SE F K + E Y E
Sbjct: 256 FKATKLFNALYMAMQKIMQRYPVDSPLRSLVDMLQTVHV-SEEFAKFLISQLREHYNNER 314
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV-STRKPLIATAERQLLERHISAILDKG 209
+ + + + DY+++ E +++ + + D S K + AT L+++ I IL
Sbjct: 315 IDKVPKMNCNDYMEYCEDQINRYSQLVKVNFDEPSALKDVQATVTNCLIQQAIPEILTHD 374
Query: 210 FTMLMDGHRTEDLQRMYSLFSR-VNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLL 268
F L+D D+ RM++L + V + +R + Y+++ G ++ D+D+VS LL
Sbjct: 375 FDDLIDSDNISDIGRMFNLCRQCVGGEDEVRTQFSKYLKKRGEKLIATCP-DEDLVSELL 433
Query: 269 EFKASLDTIWEQSF-SKNEA--FCNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKG 325
FK +D I SF S N+ + DAFE +N + +R AELI+K L + NK
Sbjct: 434 AFKKKVDFIMTGSFKSANDPVKMRQCLSDAFESFVNKQVDRSAELISKHFHTLLHSSNKN 493
Query: 326 TSEEE-LEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTE 384
S++ L+ +D+ +VLFR+++GKDVFEA+YK+ LAKRL L +SAS+DAEK ++ KLKTE
Sbjct: 494 VSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTE 553
Query: 385 CGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDV 444
CGS FT KLEGMFKD++ S+ F Q + K + + V+T YWPTY ++
Sbjct: 554 CGSAFTYKLEGMFKDMDASENYGRLFNQYLEHMNKEKANF--TARVITPEYWPTYDTYEI 611
Query: 445 RLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKG-KKELAVSLFQTVVLM 503
+P E+ +++FY ++ R + W + L V+ A F G KKEL +++QTV+L+
Sbjct: 612 NIPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILL 671
Query: 504 LFNDAQKLSFQDIKDATGIEDKELRRTLQSLACG--KVRVLQKLPKGRD------VED-- 553
LFN + + +I + T I + E+ + + +L G K +VLQ++ G VE+
Sbjct: 672 LFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLK 731
Query: 554 DDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVL 613
++ FV N FT R+++ + +K VEE E V DRQY++DAA+VRIMK RK L
Sbjct: 732 NEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQL 791
Query: 614 SHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
+H L+TEL QQL+FP+ AD+KKR+ESLI+REY+ RD YNY+A
Sbjct: 792 NHQTLMTELLQQLRFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
>UNIPROTKB|Q6GPF3 [details] [associations]
symbol:cul3b "Cullin-3-B" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 GO:GO:0048208
GO:GO:0017145 EMBL:BC073186 RefSeq:NP_001085677.1 UniGene:Xl.71281
ProteinModelPortal:Q6GPF3 SMR:Q6GPF3 PRIDE:Q6GPF3 GeneID:444103
KEGG:xla:444103 CTD:444103 Xenbase:XB-GENE-6256683 Uniprot:Q6GPF3
Length = 768
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 208/507 (41%), Positives = 309/507 (60%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 70 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 129 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 186
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 187 CQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 246
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV
Sbjct: 247 RVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRV 306
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + +++Y+R G +V +E + K D + LL+ K+ D ++SFS + F
Sbjct: 307 PNGLKTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLF 366
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 367 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEK 425
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 426 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 485
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+Q Q G++++V VLTTGYWPT P ++ P + ++ IF+ FYL+K+
Sbjct: 486 EFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIP-PSPRHAFE-IFRRFYLAKH 543
Query: 466 SGRRLMWQNSLGHCVLKAEFPKG-KKE 491
SGR+L Q+ +G L A F KKE
Sbjct: 544 SGRQLTLQHHMGSADLNATFYGAVKKE 570
Score = 393 (143.4 bits), Expect = 7.6e-33, Sum P(2) = 7.6e-33
Identities = 94/259 (36%), Positives = 145/259 (55%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 516 QSATPKCNIPPSPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGAVKKEDGSE 574
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 575 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E F N+ FT+ L+R+K+ + K E+ E
Sbjct: 630 ALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 689
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 690 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 749
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 750 EREYLARTPEDRKVYTYVA 768
Score = 37 (18.1 bits), Expect = 7.6e-33, Sum P(2) = 7.6e-33
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 35 DLLKNAIQEIQRKNNSGLSFEEL 57
>UNIPROTKB|A4IHP4 [details] [associations]
symbol:cul3 "Cullin-3" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000090 "mitotic anaphase" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0005827 "polar
microtubule" evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0005827
HOGENOM:HOG000176712 KO:K03869 GO:GO:0048208 GO:GO:0017145 CTD:8452
OrthoDB:EOG4JWVCW EMBL:BC135616 RefSeq:NP_001015975.2
UniGene:Str.1179 ProteinModelPortal:A4IHP4 SMR:A4IHP4 STRING:A4IHP4
GeneID:548729 KEGG:xtr:548729 Xenbase:XB-GENE-974982 Bgee:A4IHP4
Uniprot:A4IHP4
Length = 768
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 205/500 (41%), Positives = 306/500 (61%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 70 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 129 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 186
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 187 CQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 246
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV
Sbjct: 247 RVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRV 306
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + +++Y+R G +V +E + K D + LL+ K+ D ++SFS + F
Sbjct: 307 PNGLKTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLF 366
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 367 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEK 425
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 426 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 485
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+Q Q G++++V VLTTGYWPT P ++ P + ++ IF+ FYL+K+
Sbjct: 486 EFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIP-PAPRHAFE-IFRRFYLAKH 543
Query: 466 SGRRLMWQNSLGHCVLKAEF 485
SGR+L Q+ +G L A F
Sbjct: 544 SGRQLTLQHHMGSADLNATF 563
Score = 393 (143.4 bits), Expect = 7.6e-33, Sum P(2) = 7.6e-33
Identities = 94/259 (36%), Positives = 145/259 (55%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 516 QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPVKKEDGSE 574
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 575 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E F N+ FT+ L+R+K+ + K E+ E
Sbjct: 630 ALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 689
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 690 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 749
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 750 EREYLARTPEDRKVYTYVA 768
Score = 37 (18.1 bits), Expect = 7.6e-33, Sum P(2) = 7.6e-33
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 35 DLLKNAIQEIQRKNNSGLSFEEL 57
>UNIPROTKB|Q6DE95 [details] [associations]
symbol:cul3a "Cullin-3-A" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 EMBL:BC077239
RefSeq:NP_001086652.1 UniGene:Xl.48191 ProteinModelPortal:Q6DE95
SMR:Q6DE95 PRIDE:Q6DE95 GeneID:446487 KEGG:xla:446487 CTD:446487
Xenbase:XB-GENE-974989 GO:GO:0048208 GO:GO:0017145 Uniprot:Q6DE95
Length = 768
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 205/500 (41%), Positives = 306/500 (61%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 70 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 129 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 186
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 187 CQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 246
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV
Sbjct: 247 RVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRV 306
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + +++Y+R G +V +E + K D + LL+ K+ D ++SFS + F
Sbjct: 307 PNGLKTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLF 366
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 367 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEK 425
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 426 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 485
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+Q Q G++++V VLTTGYWPT P ++ P + ++ IF+ FYL+K+
Sbjct: 486 EFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIP-PAPRHAFE-IFRRFYLAKH 543
Query: 466 SGRRLMWQNSLGHCVLKAEF 485
SGR+L Q+ +G L A F
Sbjct: 544 SGRQLTLQHHMGSADLNATF 563
Score = 391 (142.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 94/259 (36%), Positives = 144/259 (55%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 516 QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPVKKEDGSE 574
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ K +F++I+ T I ++EL R
Sbjct: 575 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVR 629
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E F N+ FT+ L+R+K+ + K E+ E
Sbjct: 630 ALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 689
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 690 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 749
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 750 EREYLARTPEDRKVYTYVA 768
Score = 37 (18.1 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 35 DLLKNAIQEIQRKNNSGLSFEEL 57
>UNIPROTKB|E1BIN5 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 KO:K03869 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 CTD:8452 GO:GO:0001831
EMBL:DAAA02006055 EMBL:DAAA02006056 EMBL:DAAA02006057
EMBL:DAAA02006058 EMBL:DAAA02006059 IPI:IPI00712202
RefSeq:NP_001179735.1 UniGene:Bt.64031 PRIDE:E1BIN5
Ensembl:ENSBTAT00000029018 GeneID:534325 KEGG:bta:534325
NextBio:20876357 Uniprot:E1BIN5
Length = 768
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 205/500 (41%), Positives = 306/500 (61%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 70 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 129 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 186
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 187 CQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 246
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV
Sbjct: 247 RVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRV 306
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + ++ Y+R G +V +E + K D + LL+ K+ D ++SF+ + F
Sbjct: 307 PNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLF 366
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 367 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEK 425
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 426 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 485
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+Q QA G++++V VLTTGYWPT P ++ P + ++ IF+ FYL+K+
Sbjct: 486 EFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIP-PAPRHAFE-IFRRFYLAKH 543
Query: 466 SGRRLMWQNSLGHCVLKAEF 485
SGR+L Q+ +G L A F
Sbjct: 544 SGRQLTLQHHMGSADLNATF 563
Score = 393 (143.4 bits), Expect = 7.6e-33, Sum P(2) = 7.6e-33
Identities = 94/259 (36%), Positives = 146/259 (56%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 516 QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPVKKEDGSE 574
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 575 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E+ F N+ FT+ L+R+K+ + K E+ E
Sbjct: 630 ALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 689
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 690 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 749
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 750 EREYLARTPEDRKVYTYVA 768
Score = 37 (18.1 bits), Expect = 7.6e-33, Sum P(2) = 7.6e-33
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 35 DLLKNAIQEIQRKNNSGLSFEEL 57
>UNIPROTKB|F1PU58 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 GO:GO:0001831 EMBL:AAEX03014406
ProteinModelPortal:F1PU58 Ensembl:ENSCAFT00000016275 Uniprot:F1PU58
Length = 750
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 205/500 (41%), Positives = 306/500 (61%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 52 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 110
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 111 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 168
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 169 CQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 228
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV
Sbjct: 229 RVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRV 288
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + ++ Y+R G +V +E + K D + LL+ K+ D ++SF+ + F
Sbjct: 289 PNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLF 348
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 349 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEK 407
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 408 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 467
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+Q QA G++++V VLTTGYWPT P ++ P + ++ IF+ FYL+K+
Sbjct: 468 EFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIP-PAPRHAFE-IFRRFYLAKH 525
Query: 466 SGRRLMWQNSLGHCVLKAEF 485
SGR+L Q+ +G L A F
Sbjct: 526 SGRQLTLQHHMGSADLNATF 545
Score = 393 (143.4 bits), Expect = 6.5e-33, Sum P(2) = 6.5e-33
Identities = 94/259 (36%), Positives = 146/259 (56%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 498 QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPVKKEDGSE 556
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 557 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 611
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E+ F N+ FT+ L+R+K+ + K E+ E
Sbjct: 612 ALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 671
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 672 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 731
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 732 EREYLARTPEDRKVYTYVA 750
Score = 37 (18.1 bits), Expect = 6.5e-33, Sum P(2) = 6.5e-33
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 17 DLLKNAIQEIQRKNNSGLSFEEL 39
>MGI|MGI:1347360 [details] [associations]
symbol:Cul3 "cullin 3" species:10090 "Mus musculus"
[GO:0000090 "mitotic anaphase" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005827 "polar microtubule" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP]
[GO:0008054 "cyclin catabolic process" evidence=ISS] [GO:0016055
"Wnt receptor signaling pathway" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016477 "cell
migration" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017145 "stem cell division" evidence=IMP]
[GO:0030332 "cyclin binding" evidence=IPI] [GO:0031208 "POZ domain
binding" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032467 "positive regulation of
cytokinesis" evidence=ISO] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=ISO] [GO:0040016 "embryonic
cleavage" evidence=IMP] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048208 "COPII vesicle
coating" evidence=ISO] [GO:0051322 "anaphase" evidence=ISO]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
MGI:MGI:1347360 GO:GO:0005634 GO:GO:0005794 GO:GO:0016477
GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0040016 GO:GO:0000910 GO:GO:0007229 GO:GO:0035024
GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0007369 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145
CTD:8452 HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW ChiTaRS:CUL3
GO:GO:0001831 EMBL:AF129738 EMBL:BC027304 IPI:IPI00467383
RefSeq:NP_057925.1 UniGene:Mm.12665 PDB:1IUY PDBsum:1IUY
ProteinModelPortal:Q9JLV5 SMR:Q9JLV5 IntAct:Q9JLV5 STRING:Q9JLV5
PhosphoSite:Q9JLV5 PaxDb:Q9JLV5 PRIDE:Q9JLV5
Ensembl:ENSMUST00000163119 GeneID:26554 KEGG:mmu:26554
InParanoid:Q9JLV5 EvolutionaryTrace:Q9JLV5 NextBio:304599
Bgee:Q9JLV5 CleanEx:MM_CUL3 Genevestigator:Q9JLV5
GermOnline:ENSMUSG00000004364 Uniprot:Q9JLV5
Length = 768
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 205/500 (41%), Positives = 306/500 (61%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 70 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 129 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 186
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 187 CQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 246
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV
Sbjct: 247 RVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRV 306
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + ++ Y+R G +V +E + K D + LL+ K+ D ++SF+ + F
Sbjct: 307 PNGLKTMCECMSCYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLF 366
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 367 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEK 425
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 426 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 485
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+Q QA G++++V VLTTGYWPT P ++ P + ++ IF+ FYL+K+
Sbjct: 486 EFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIP-PAPRHAFE-IFRRFYLAKH 543
Query: 466 SGRRLMWQNSLGHCVLKAEF 485
SGR+L Q+ +G L A F
Sbjct: 544 SGRQLTLQHHMGSADLNATF 563
Score = 392 (143.0 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 94/259 (36%), Positives = 145/259 (55%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 516 QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPVKKEDGSE 574
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 575 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E F N+ FT+ L+R+K+ + K E+ E
Sbjct: 630 ALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 689
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 690 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 749
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 750 EREYLARTPEDRKVYTYVA 768
Score = 37 (18.1 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 35 DLLKNAIQEIQRKNNSGLSFEEL 57
>RGD|1308190 [details] [associations]
symbol:Cul3 "cullin 3" species:10116 "Rattus norvegicus"
[GO:0000090 "mitotic anaphase" evidence=IEA;ISO] [GO:0000209
"protein polyubiquitination" evidence=ISO;ISS] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001831 "trophectodermal cellular morphogenesis"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005827 "polar microtubule" evidence=IEA;ISO] [GO:0006513
"protein monoubiquitination" evidence=ISO;ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO;ISS] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;ISS] [GO:0007369
"gastrulation" evidence=IEA;ISO] [GO:0008054 "cyclin catabolic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0016477 "cell migration" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0017145
"stem cell division" evidence=ISO;ISS] [GO:0030332 "cyclin binding"
evidence=IEA;ISO] [GO:0031208 "POZ domain binding"
evidence=ISO;ISS] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032467 "positive regulation of cytokinesis"
evidence=ISO;ISS] [GO:0035024 "negative regulation of Rho protein
signal transduction" evidence=IEA;ISO] [GO:0040016 "embryonic
cleavage" evidence=ISO;ISS] [GO:0043149 "stress fiber assembly"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0048208 "COPII
vesicle coating" evidence=ISO;ISS] [GO:0051322 "anaphase"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:1308190 GO:GO:0005634 GO:GO:0005794
GO:GO:0016477 GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 HOGENOM:HOG000176712
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 HOVERGEN:HBG003619
OrthoDB:EOG4JWVCW GO:GO:0001831 EMBL:BC168969 IPI:IPI00209412
UniGene:Rn.101949 STRING:B5DF89 PRIDE:B5DF89
Ensembl:ENSRNOT00000021528 UCSC:RGD:1308190 Genevestigator:B5DF89
Uniprot:B5DF89
Length = 768
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 205/500 (41%), Positives = 306/500 (61%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 70 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 129 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 186
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 187 CQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 246
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV
Sbjct: 247 RVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRV 306
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + ++ Y+R G +V +E + K D + LL+ K+ D ++SF+ + F
Sbjct: 307 PNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLF 366
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 367 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEK 425
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 426 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 485
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+Q QA G++++V VLTTGYWPT P ++ P + ++ IF+ FYL+K+
Sbjct: 486 EFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIP-PAPRHAFE-IFRRFYLAKH 543
Query: 466 SGRRLMWQNSLGHCVLKAEF 485
SGR+L Q+ +G L A F
Sbjct: 544 SGRQLTLQHHMGSADLNATF 563
Score = 392 (143.0 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 94/259 (36%), Positives = 145/259 (55%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 516 QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPVKKEDGSE 574
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 575 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E F N+ FT+ L+R+K+ + K E+ E
Sbjct: 630 ALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 689
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 690 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 749
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 750 EREYLARTPEDRKVYTYVA 768
Score = 37 (18.1 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 35 DLLKNAIQEIQRKNNSGLSFEEL 57
>UNIPROTKB|E1BYQ3 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005827 "polar microtubule" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0008054 "cyclin catabolic process" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0017145 "stem cell
division" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0035024 "negative regulation of Rho protein signal
transduction" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0048208 "COPII vesicle coating" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0005827
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 EMBL:AADN02024135
IPI:IPI00576031 Ensembl:ENSGALT00000008191 Uniprot:E1BYQ3
Length = 746
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 204/500 (40%), Positives = 306/500 (61%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 48 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 106
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 107 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 164
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 165 CQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 224
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV
Sbjct: 225 RVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRV 284
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + ++ Y+R G +V +E + K D + LL+ K+ D ++SF+ + F
Sbjct: 285 PNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLF 344
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 345 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEK 403
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 404 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 463
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+Q Q+ G++++V VLTTGYWPT P ++ P + ++ IF+ FYL+K+
Sbjct: 464 EFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIP-PAPRHAFE-IFRRFYLAKH 521
Query: 466 SGRRLMWQNSLGHCVLKAEF 485
SGR+L Q+ +G L A F
Sbjct: 522 SGRQLTLQHHMGSADLNATF 541
Score = 393 (143.4 bits), Expect = 6.3e-33, Sum P(2) = 6.3e-33
Identities = 94/259 (36%), Positives = 146/259 (56%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 494 QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPVKKEDGSE 552
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 553 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 607
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E+ F N+ FT+ L+R+K+ + K E+ E
Sbjct: 608 ALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 667
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 668 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 727
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 728 EREYLARTPEDRKVYTYVA 746
Score = 37 (18.1 bits), Expect = 6.3e-33, Sum P(2) = 6.3e-33
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 13 DLLKNAIQEIQRKNNSGLSFEEL 35
>UNIPROTKB|Q13618 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0001831 "trophectodermal cellular morphogenesis" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=IDA] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005827 "polar
microtubule" evidence=IDA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=IMP] [GO:0043149 "stress
fiber assembly" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0006513 "protein monoubiquitination" evidence=IDA] [GO:0048208
"COPII vesicle coating" evidence=IMP] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0040016 "embryonic cleavage"
evidence=ISS] [GO:0032467 "positive regulation of cytokinesis"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0031208 "POZ domain binding" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005794 Reactome:REACT_6900
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0016477 GO:GO:0000090
GO:GO:0016055 GO:GO:0000082 GO:GO:0008284 EMBL:CH471063
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 GO:GO:0097193
eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632 GO:GO:0007369
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208
GO:GO:0017145 EMBL:AF064087 EMBL:AB014517 EMBL:AF062537
EMBL:AY337761 EMBL:AK291151 EMBL:AC073052 EMBL:AC092679
EMBL:BC031844 EMBL:BC039598 EMBL:BC092409 EMBL:U58089 EMBL:AF052147
IPI:IPI00014312 IPI:IPI00382458 IPI:IPI00382459
RefSeq:NP_001244126.1 RefSeq:NP_001244127.1 RefSeq:NP_003581.1
UniGene:Hs.372286 PDB:4AP2 PDB:4APF PDB:4EOZ PDBsum:4AP2
PDBsum:4APF PDBsum:4EOZ ProteinModelPortal:Q13618 SMR:Q13618
DIP:DIP-31611N IntAct:Q13618 STRING:Q13618 PhosphoSite:Q13618
DMDM:12643396 PaxDb:Q13618 PRIDE:Q13618 Ensembl:ENST00000264414
Ensembl:ENST00000344951 Ensembl:ENST00000409096
Ensembl:ENST00000409777 GeneID:8452 KEGG:hsa:8452 UCSC:uc002vny.2
UCSC:uc010zls.1 CTD:8452 GeneCards:GC02M225298 HGNC:HGNC:2553
HPA:CAB002678 MIM:603136 MIM:614496 neXtProt:NX_Q13618
Orphanet:300530 PharmGKB:PA27049 HOVERGEN:HBG003619
InParanoid:Q13618 OrthoDB:EOG4JWVCW PhylomeDB:Q13618 ChiTaRS:CUL3
GenomeRNAi:8452 NextBio:31630 ArrayExpress:Q13618 Bgee:Q13618
CleanEx:HS_CUL3 Genevestigator:Q13618 GermOnline:ENSG00000036257
GO:GO:0001831 Uniprot:Q13618
Length = 768
Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
Identities = 205/500 (41%), Positives = 305/500 (61%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 70 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 128
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 129 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 186
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 187 CQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 246
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV
Sbjct: 247 RVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRV 306
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + ++ Y+R G +V +E + K D + LL+ K+ D +SF+ + F
Sbjct: 307 PNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLLESFNNDRLF 366
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 367 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEK 425
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 426 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 485
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+Q QA G++++V VLTTGYWPT P ++ P + ++ IF+ FYL+K+
Sbjct: 486 EFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIP-PAPRHAFE-IFRRFYLAKH 543
Query: 466 SGRRLMWQNSLGHCVLKAEF 485
SGR+L Q+ +G L A F
Sbjct: 544 SGRQLTLQHHMGSADLNATF 563
Score = 393 (143.4 bits), Expect = 7.6e-33, Sum P(2) = 7.6e-33
Identities = 94/259 (36%), Positives = 146/259 (56%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 516 QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPVKKEDGSE 574
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 575 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E+ F N+ FT+ L+R+K+ + K E+ E
Sbjct: 630 ALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 689
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 690 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 749
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 750 EREYLARTPEDRKVYTYVA 768
Score = 37 (18.1 bits), Expect = 7.6e-33, Sum P(2) = 7.6e-33
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 35 DLLKNAIQEIQRKNNSGLSFEEL 57
>ZFIN|ZDB-GENE-081007-1 [details] [associations]
symbol:cul3b "cullin 3b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-081007-1 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW EMBL:BC163249 IPI:IPI00481059
RefSeq:NP_001177414.1 UniGene:Dr.150567 STRING:B3DIU1 GeneID:572370
KEGG:dre:572370 CTD:572370 NextBio:20890938 ArrayExpress:B3DIU1
Uniprot:B3DIU1
Length = 766
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 202/500 (40%), Positives = 304/500 (60%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 69 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 127
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 128 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 185
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFLE ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 186 CQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 245
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LFSRV
Sbjct: 246 RVIHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRV 305
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + ++ Y+R G +V +E + K D + LL+ K+ D ++SF+ + F
Sbjct: 306 PNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLF 365
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 366 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEK 424
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 425 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 484
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+Q + G+++ V VLTTGYWPT P ++ P + ++ +F+ FYL+K+
Sbjct: 485 EFRQHLTSTGVSLGGVDLIVRVLTTGYWPTQSATPKCNIP-PSPRHAFE-VFRRFYLAKH 542
Query: 466 SGRRLMWQNSLGHCVLKAEF 485
SGR+L Q+ +G L A F
Sbjct: 543 SGRQLTLQHHMGSADLNATF 562
Score = 388 (141.6 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 94/259 (36%), Positives = 146/259 (56%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + V Y + + L H + D+ FY + K G
Sbjct: 515 QSATPKCNIPPSPRHAFEVFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPIKKEDG-- 571
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 572 ---SDMVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKSTFEEIQQETDIPERELVR 627
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E+ F N+ FT+ L+R+K+ + K E+ E
Sbjct: 628 ALQSLACGKPTQRVLTKEPKSKEIENGHVFTVNDQFTSRLHRVKIQTVAAKQGESDPERK 687
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQL+ F P +KKRIE LI
Sbjct: 688 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLI 747
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 748 EREYLARTPEDRKVYTYVA 766
Score = 37 (18.1 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 34 DLLKNAIQEIQRKNNSGLSFEEL 56
>WB|WBGene00000838 [details] [associations]
symbol:cul-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0044254 "multicellular organismal protein
catabolic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176712 KO:K03869
OMA:ATFYGPI EMBL:U58085 EMBL:FO081768 RefSeq:NP_503151.1
ProteinModelPortal:Q17391 SMR:Q17391 IntAct:Q17391 MINT:MINT-274347
STRING:Q17391 PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 609 (219.4 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 138/382 (36%), Positives = 223/382 (58%)
Query: 129 IYSESFEKPFLECTSEFYAAEGMKYMQ-QSDVPDYLKHVEIRLHEEHERCLLYLDVSTRK 187
+Y + FE+P L+ TS++Y ++ +D YL VEI +H+E R YLD T
Sbjct: 198 VYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEASRASRYLDKMTEA 257
Query: 188 PLIATAERQLLERHISAIL---DKGFTMLMDGHRTEDLQRMYSLFSRVN--------ALE 236
++ + ++ HI I+ + G +++ + EDL R++ +F R+ L+
Sbjct: 258 KILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGGLK 317
Query: 237 SLRQALAMYIRRTGHGIVMDEEKDKD---MVSSLLEFKASLDTIWEQSFSKNEAFCNTIK 293
+L +A++ Y+ TG IV +E+ K+ V+ LL+ K ++ +F+ + F N +
Sbjct: 318 ALLKAVSEYLNETGSNIVKNEDLLKNPVNFVNELLQLKDYFSSLLTTAFADDRDFKNRFQ 377
Query: 294 DAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEA 353
FE +N + P E +A ++D+ LR+G K S+ E++ LD V++LFR++Q KDVFE
Sbjct: 378 HDFETFLNSNRQSP-EFVALYMDDMLRSGLKCVSDAEMDNKLDNVMILFRYLQEKDVFEK 436
Query: 354 FYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQS 413
++K+ LAKRLLL KS S D EK++++KLKTECG QFT KLE MF+D EL + SF+
Sbjct: 437 YFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLATSFRDW 496
Query: 414 SQAR-TKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
+A+ TK+ I++S+ VLT G WPT V LP EL+V ++F ++Y K++GR+L
Sbjct: 497 REAQPTKM--SIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMFTQYYTEKHTGRKLTI 554
Query: 473 QNSLGHCVLKAEF-PKGKKELA 493
LG+ +KA F P K ++
Sbjct: 555 NTLLGNADVKATFYPPPKASMS 576
Score = 337 (123.7 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 79/188 (42%), Positives = 117/188 (62%)
Query: 481 LKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV- 539
+K P+ K L V+ Q ++L+ FN ++S Q + D I ++EL+R LQSLA GK
Sbjct: 591 MKERKPE-HKILQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKAS 649
Query: 540 -RVLQKLPKGRDVED-DDSFVFNEGFTAPLYRIKVNAIQMK-ETVEENTSTTERVFQDRQ 596
R+L + KG+D D D F N+ F + L R+KV + K E+ E T ++V DR+
Sbjct: 650 QRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRK 709
Query: 597 YQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLIDREYLERDKNN 654
+V+AAIVRIMK RK L+H L+ E+ QQL+ F P +K+RIE+LI+REYL RD+++
Sbjct: 710 LEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHD 769
Query: 655 PQIYNYLA 662
+ Y Y+A
Sbjct: 770 HRAYQYIA 777
Score = 271 (100.5 bits), Expect = 7.1e-51, Sum P(2) = 7.1e-51
Identities = 66/240 (27%), Positives = 122/240 (50%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY ++ ++H+ A++R + +S + FL V W D M+MIR I +Y+DR
Sbjct: 67 GERLYNGLKDVIQDHM-ASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDR 125
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLL 121
YV Q +V ++++GL +R + + + + LL +I+ +R ++ + +
Sbjct: 126 IYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKNAC 185
Query: 122 KMFTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQ-QSDVPDYLKHVEIRLHEEHE 175
M +LGI Y + FE+P L+ TS++Y ++ +D YL VEI +H+E
Sbjct: 186 DMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEAS 245
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAIL---DKGFTMLMDGHRTEDLQRMYSLFSRV 232
R YLD T ++ + ++ HI I+ + G +++ + EDL R++ +F R+
Sbjct: 246 RASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRI 305
Score = 56 (24.8 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 454 QDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQ---- 509
+D+F++ Y +Y +RL+ S V KA K K E Q + M F D +
Sbjct: 431 KDVFEK-YFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENM-FRDKELWLT 488
Query: 510 -KLSFQDIKDA 519
SF+D ++A
Sbjct: 489 LATSFRDWREA 499
Score = 42 (19.8 bits), Expect = 7.7e-27, Sum P(2) = 7.7e-27
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
EL+ + + E R N G S EEL
Sbjct: 32 ELLKRAIQEIQRKNNSGLSFEEL 54
>UNIPROTKB|Q17391 [details] [associations]
symbol:cul-3 "Cullin-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0035046
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K03869 OMA:ATFYGPI EMBL:U58085
EMBL:FO081768 RefSeq:NP_503151.1 ProteinModelPortal:Q17391
SMR:Q17391 IntAct:Q17391 MINT:MINT-274347 STRING:Q17391
PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 609 (219.4 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 138/382 (36%), Positives = 223/382 (58%)
Query: 129 IYSESFEKPFLECTSEFYAAEGMKYMQ-QSDVPDYLKHVEIRLHEEHERCLLYLDVSTRK 187
+Y + FE+P L+ TS++Y ++ +D YL VEI +H+E R YLD T
Sbjct: 198 VYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEASRASRYLDKMTEA 257
Query: 188 PLIATAERQLLERHISAIL---DKGFTMLMDGHRTEDLQRMYSLFSRVN--------ALE 236
++ + ++ HI I+ + G +++ + EDL R++ +F R+ L+
Sbjct: 258 KILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGGLK 317
Query: 237 SLRQALAMYIRRTGHGIVMDEEKDKD---MVSSLLEFKASLDTIWEQSFSKNEAFCNTIK 293
+L +A++ Y+ TG IV +E+ K+ V+ LL+ K ++ +F+ + F N +
Sbjct: 318 ALLKAVSEYLNETGSNIVKNEDLLKNPVNFVNELLQLKDYFSSLLTTAFADDRDFKNRFQ 377
Query: 294 DAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEA 353
FE +N + P E +A ++D+ LR+G K S+ E++ LD V++LFR++Q KDVFE
Sbjct: 378 HDFETFLNSNRQSP-EFVALYMDDMLRSGLKCVSDAEMDNKLDNVMILFRYLQEKDVFEK 436
Query: 354 FYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQS 413
++K+ LAKRLLL KS S D EK++++KLKTECG QFT KLE MF+D EL + SF+
Sbjct: 437 YFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLATSFRDW 496
Query: 414 SQAR-TKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
+A+ TK+ I++S+ VLT G WPT V LP EL+V ++F ++Y K++GR+L
Sbjct: 497 REAQPTKM--SIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMFTQYYTEKHTGRKLTI 554
Query: 473 QNSLGHCVLKAEF-PKGKKELA 493
LG+ +KA F P K ++
Sbjct: 555 NTLLGNADVKATFYPPPKASMS 576
Score = 337 (123.7 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 79/188 (42%), Positives = 117/188 (62%)
Query: 481 LKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV- 539
+K P+ K L V+ Q ++L+ FN ++S Q + D I ++EL+R LQSLA GK
Sbjct: 591 MKERKPE-HKILQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKAS 649
Query: 540 -RVLQKLPKGRDVED-DDSFVFNEGFTAPLYRIKVNAIQMK-ETVEENTSTTERVFQDRQ 596
R+L + KG+D D D F N+ F + L R+KV + K E+ E T ++V DR+
Sbjct: 650 QRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRK 709
Query: 597 YQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLIDREYLERDKNN 654
+V+AAIVRIMK RK L+H L+ E+ QQL+ F P +K+RIE+LI+REYL RD+++
Sbjct: 710 LEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHD 769
Query: 655 PQIYNYLA 662
+ Y Y+A
Sbjct: 770 HRAYQYIA 777
Score = 271 (100.5 bits), Expect = 7.1e-51, Sum P(2) = 7.1e-51
Identities = 66/240 (27%), Positives = 122/240 (50%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY ++ ++H+ A++R + +S + FL V W D M+MIR I +Y+DR
Sbjct: 67 GERLYNGLKDVIQDHM-ASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDR 125
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLL 121
YV Q +V ++++GL +R + + + + LL +I+ +R ++ + +
Sbjct: 126 IYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKNAC 185
Query: 122 KMFTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQ-QSDVPDYLKHVEIRLHEEHE 175
M +LGI Y + FE+P L+ TS++Y ++ +D YL VEI +H+E
Sbjct: 186 DMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEAS 245
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAIL---DKGFTMLMDGHRTEDLQRMYSLFSRV 232
R YLD T ++ + ++ HI I+ + G +++ + EDL R++ +F R+
Sbjct: 246 RASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRI 305
Score = 56 (24.8 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 454 QDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQ---- 509
+D+F++ Y +Y +RL+ S V KA K K E Q + M F D +
Sbjct: 431 KDVFEK-YFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENM-FRDKELWLT 488
Query: 510 -KLSFQDIKDA 519
SF+D ++A
Sbjct: 489 LATSFRDWREA 499
Score = 42 (19.8 bits), Expect = 7.7e-27, Sum P(2) = 7.7e-27
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
EL+ + + E R N G S EEL
Sbjct: 32 ELLKRAIQEIQRKNNSGLSFEEL 54
>ZFIN|ZDB-GENE-030131-3376 [details] [associations]
symbol:cul3a "cullin 3a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-3376 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03869 HOVERGEN:HBG003619 EMBL:AY423034
IPI:IPI00921732 RefSeq:NP_955985.1 UniGene:Dr.75956
ProteinModelPortal:Q6TEL5 SMR:Q6TEL5 STRING:Q6TEL5 GeneID:324655
KEGG:dre:324655 CTD:324655 InParanoid:Q6TEL5 NextBio:20808899
ArrayExpress:Q6TEL5 Uniprot:Q6TEL5
Length = 766
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 200/500 (40%), Positives = 303/500 (60%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 68 GEKLYTGLREVVTEHLINKVREDVLHSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 126
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIERERLGEAVDRTLLNHL 120
YV+Q NV +++++GL +FR + Y + +H T LL MI RER GE VDR + +
Sbjct: 127 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIARERKGEVVDRGAIRNA 184
Query: 121 LKMFTALG-----IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
+M LG +Y E FE PFL+ ++EF+ E K++ ++ Y+K VE R++EE E
Sbjct: 185 CQMLMVLGLKGRSVYEEDFEIPFLDMSAEFFQMESQKFLAENSASVYIKKVEARINEEIE 244
Query: 176 RCLLYLDVSTRKPLIATAERQLLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRV 232
R + LD ST +P++ ER+L+ +H+ I++ G ++ +TEDL MY LF RV
Sbjct: 245 RVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFGRV 304
Query: 233 -NALESLRQALAMYIRRTGHGIVMDEEKDK---DMVSSLLEFKASLDTIWEQSFSKNEAF 288
N L+++ + ++ Y+R G +V +E + K D + LL+ K+ D ++SF+ + F
Sbjct: 305 PNGLKTMCECMSWYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLF 364
Query: 289 CNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 348
TI FEY +NL P E ++ F+D+KL+ G KG +E+E+E LDK +VLFRF+Q K
Sbjct: 365 KQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEK 423
Query: 349 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 408
DVFE +YK+ LA+RLL KS S D+EK+MISKLKTECG QFT+KLEGMF+D+ +S +
Sbjct: 424 DVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMD 483
Query: 409 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKY 465
F+ Q G++++V VLTTGYWPT P ++ P + ++ +F+ FYL+K+
Sbjct: 484 EFRHHLQTSQVSLCGVDLTVRVLTTGYWPTQSATPKCNIP-PSPRHAFE-VFRRFYLAKH 541
Query: 466 SGRRLMWQNSLGHCVLKAEF 485
SGR+L Q+ +G L A F
Sbjct: 542 SGRQLTLQHHMGSADLNATF 561
Score = 396 (144.5 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 95/259 (36%), Positives = 146/259 (56%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + V Y + + L H + D+ FY + K G
Sbjct: 514 QSATPKCNIPPSPRHAFEVFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPIKKEDGSD 572
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G +L + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 573 V----GVGGALLTGSNTR-KHILQVSTFQMTILMLFNNREKFTFEEIQQETDIPERELVR 627
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E F N+ FT+ L+R+K+ + K E+ E
Sbjct: 628 ALQSLACGKPTQRVLTKEPKSKEIESGHVFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 687
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQL+ F P +KKRIE LI
Sbjct: 688 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLI 747
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 748 EREYLARTPEDRKVYTYVA 766
Score = 37 (18.1 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 309 ELIAKFLDEKLRAGNKGTSEEEL 331
+L+ + E R N G S EEL
Sbjct: 33 DLLKNAIQEIQRKNNSGLSFEEL 55
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 703 (252.5 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 154/410 (37%), Positives = 240/410 (58%)
Query: 259 KDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN--LRQNRPAELIAKFLD 316
+D+ ++ L++ ++ F K+ F +K+AFE N + AE++A + D
Sbjct: 337 QDQVLIRQLIDLHDKFMVYVDECFQKHSLFHKALKEAFEVFCNKTVAGVSSAEILATYCD 396
Query: 317 EKLRAGN--KGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAE 374
L+ G + E+LE TL+KV+ L +I KD+F F++K A+RLL ++ + E
Sbjct: 397 NILKTGGGIEKLENEDLELTLEKVVKLLVYISDKDLFAEFFRKKQARRLLFDRNGNDYHE 456
Query: 375 KSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTG 434
+S+++K K G+QFT+K+EGM D+ L+KE +F + G++ +V VLTTG
Sbjct: 457 RSLLTKFKELLGAQFTSKMEGMLTDMTLAKEHQTNFVEFLSVNKTKKLGMDFTVTVLTTG 516
Query: 435 YWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAV 494
+WP+Y D+ LP E+ + FK +Y +K + RRL W SLG C L +F K E+ V
Sbjct: 517 FWPSYKTTDLNLPIEMVNCVEAFKAYYGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVV 576
Query: 495 SLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDD 554
+ +Q VL+LFN+ ++LS+ +I + + ++L R L SL+C K ++L K P R++ +
Sbjct: 577 TTYQAAVLLLFNNTERLSYTEILEQLNLGHEDLARLLHSLSCLKYKILIKEPMSRNISNT 636
Query: 555 DSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLS 614
D+F FN FT + RI+V M +E E V +DR+Y +DAA+VRIMK+RKVL
Sbjct: 637 DTFEFNSKFTDKMRRIRVPLPPM----DERKKIVEDVDKDRRYAIDAALVRIMKSRKVLG 692
Query: 615 HTLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYLA 662
H L++E + L KP +KKRIE LI R+YLERD +NP + YLA
Sbjct: 693 HQQLVSECVEHLSKMFKPDIKMIKKRIEDLISRDYLERDTDNPNTFKYLA 742
Score = 229 (85.7 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 77/308 (25%), Positives = 140/308 (45%)
Query: 3 GNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIAL---YL 59
G +Y K+ + AIR G+ + LV+R W +Q +++R ++ YL
Sbjct: 68 GGVYVDYNKQT---VLPAIREKHGE----YMLRELVKR-W---ANQKILVRWLSHFFEYL 116
Query: 60 DRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNH 119
DR Y ++ + +L +G FR + Y E++ K +L +I +ER GE +DR LL +
Sbjct: 117 DRFYTRRGSHP-TLSAVGFISFRDLV--YQELQSKAKDAVLALIHKEREGEQIDRALLKN 173
Query: 120 LLKMFTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEH 174
++ ++ G+ Y E FE LE ++ +Y+ ++ Q++ PDY+ E L E
Sbjct: 174 VIDVYCGNGMGELVKYEEDFESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEK 233
Query: 175 ERCLLYLDVSTRKPLIATAERQLLERHISAILDK---GFTMLMDGHRTEDLQRMYSLFSR 231
ER YL +T L+A + +LL +++ G L+ + +DL RMY L+
Sbjct: 234 ERVTNYLHSTTEPKLVAKVQNELLVVVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHP 293
Query: 232 V-NALESLRQALAMYIRRTGHGIVMDE-EKDKDMVSSLLEFKASLDTIWEQSFSKNEAFC 289
+ L+ + +I G ++ E D +S K + Q ++ F
Sbjct: 294 IPQGLDPVADLFKQHITVEGSALIKQATEAATDKAASTSGLKVQDQVLIRQLIDLHDKFM 353
Query: 290 NTIKDAFE 297
+ + F+
Sbjct: 354 VYVDECFQ 361
>UNIPROTKB|E1C0W8 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:SGVINCY
EMBL:AADN02027289 EMBL:AADN02027286 EMBL:AADN02027287
EMBL:AADN02027288 IPI:IPI00590577 Ensembl:ENSGALT00000020252
Uniprot:E1C0W8
Length = 777
Score = 796 (285.3 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 202/555 (36%), Positives = 297/555 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+
Sbjct: 226 LTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQ 285
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +
Sbjct: 286 DELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 344
Query: 246 IRRTGHGIV--MDEE--KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
I G + E D M V ++L+ + + +F+ + F + A I
Sbjct: 345 IHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFI 404
Query: 301 N------LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
N + Q+ + EL+A++ D L+ +K E ELE TL++V+V+F++I+ KDVF+
Sbjct: 405 NNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQ 464
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 412
FY K LAKRL+ SAS DAE SMISKLK CG ++T+KL+ MF+DI +SK++NE FK+
Sbjct: 465 KFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKK 524
Query: 413 SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
P ++ S+ VL++G WP LP EL F FY S++SGR+L W
Sbjct: 525 --HLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTW 582
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQ 532
L L K + L S FQ +L+ +N + Q + D+T I+ L + LQ
Sbjct: 583 LYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQ 642
Query: 533 SLACGKVRVLQKLPKGRD-VE-DDDSFV-FNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
L K+ VL+ D VE D+ + G+ R+ +N E +E +T +
Sbjct: 643 ILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHK 702
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREY 647
+ +DR+ + AAIVRIMK RKVL H L+ E+ QL KP +KK I+ LI++EY
Sbjct: 703 NIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEY 762
Query: 648 LERDKNNPQIYNYLA 662
LER Y+YLA
Sbjct: 763 LERVDGEKDTYSYLA 777
Score = 61 (26.5 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 33/161 (20%), Positives = 71/161 (44%)
Query: 2 GGNLYQRIE--KECEEHISAAIRSLVGQSPDLV--VFLSLVERCWQDLCDQMLMIRGIAL 57
GG + +E K +E + + +L+ DL+ L + W+D ++ GI
Sbjct: 79 GGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICA 138
Query: 58 YLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSS--YSEVEHKTVTGLLRMIERERLGE 110
YL+R +V++ + ++ + L +R L +V++K LL+ ++++
Sbjct: 139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVQNKC---LLKKKKKKKAMR 195
Query: 111 AVDRTLLNHLLKMFTALGIYSE-SFEK-PFLECTSEFYAAE 149
+ + + LL LG+ + +F K P L E + ++
Sbjct: 196 MLSQLITFILLVFVVELGLNEDDAFAKGPTLTVYKESFESQ 236
>POMBASE|SPAC17G6.12 [details] [associations]
symbol:cul1 "cullin 1" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC17G6.12 GO:GO:0005829 GO:GO:0007346
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049 GO:GO:0019005
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY
OrthoDB:EOG4W3WW4 EMBL:AB016896 EMBL:AB027897 PIR:T37844 PIR:T43398
RefSeq:NP_594259.1 ProteinModelPortal:O13790 IntAct:O13790
MINT:MINT-3377010 STRING:O13790 EnsemblFungi:SPAC17G6.12.1
GeneID:2542393 KEGG:spo:SPAC17G6.12 NextBio:20803452 Uniprot:O13790
Length = 767
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 200/555 (36%), Positives = 300/555 (54%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L Y FE F+E T FYA E +Y+ + DYLK EIRL EE E LYL ST
Sbjct: 218 LSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTL 277
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
KPL+ E L+ +H +L F ++D + +ED+ RMY L SR N L+ LRQ +
Sbjct: 278 KPLLEATEDVLIAQH-EEVLHNDFARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEF 336
Query: 246 IRRTGHGIV------MDEEKD---KDMVSSLLE-FKASLDTIWEQSFSKNEAFCNTIKDA 295
++R+G V + E D K+ + LL +KAS + + +F + F ++ A
Sbjct: 337 VKRSGFAAVAKIVPQVGGEADVDPKEYMEMLLSTYKASKELV-NTAFHGDTDFTKSLDTA 395
Query: 296 FEYLINLR------QNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKD 349
F L+N +R EL+AK+ D LR NK +++E L ++++FR+++ KD
Sbjct: 396 FRELVNRNVVCQRSSSRSPELLAKYADSILRKSNKNVDIDDVEDCLSSIIIIFRYVEDKD 455
Query: 350 VFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINES 409
VF+ FY K LAKRL+ G S S DAE SM+SKLK CG ++T+KL+ MF+DI LS+EI E+
Sbjct: 456 VFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEA 515
Query: 410 FKQSSQARTKLPSGIEMSVHVLTTGYWPTYPP-MDVRLPHELNVYQDIFKEFYLSKYSGR 468
F Q Q+R I+ S VL T +WP P ++ LP EL + F+ +Y S ++GR
Sbjct: 516 FWQLPQSRA---GNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGR 572
Query: 469 RLMWQNSLGHCVLKAEF-PKGKKELA--VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDK 525
+L W L +KA P+ VS +Q VL+L+N +++++ TG+
Sbjct: 573 KLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTD 632
Query: 526 ELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENT 585
L L KV +L K D + ++ NE F R+++N E +E+
Sbjct: 633 FLTGILNIFLKAKVLLLGDNDKLGD--PNSTYKINENFRMKKIRVQLNLPIRSEQKQESL 690
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T + + +DR+ + +AIVRIMK R+ L H +L+ E Q+K F K +D+K+ I+ LI
Sbjct: 691 ETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLI 750
Query: 644 DREYLERDKNNPQIY 658
++EYLER + IY
Sbjct: 751 EKEYLERQGRDEYIY 765
Score = 263 (97.6 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 79/270 (29%), Positives = 123/270 (45%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+G LY + EE+++ + + Q+ + L+ + W I + YL+
Sbjct: 78 LGEALYNNLVLYLEEYLARLRKECISQT-NHEEQLAAYAKYWTRFTTSARFINHLFGYLN 136
Query: 61 RTYVKQTPNVRS--LWDM-GLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
R +VK ++D+ L L + +S + + LL M ++RL E D +
Sbjct: 137 RYWVKLKNRFTETLVYDIYTLCLVSWHHHVFSHIRDSLLQNLLYMFTKKRLYEPTDMKYV 196
Query: 118 NHLLKMFTALGI------------YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKH 165
+ T+L Y FE F+E T FYA E +Y+ + DYLK
Sbjct: 197 EVCVDSITSLSFDKTDMTKPNLSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKK 256
Query: 166 VEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRM 225
EIRL EE E LYL ST KPL+ E L+ +H +L F ++D + +ED+ RM
Sbjct: 257 AEIRLAEEEELVRLYLHESTLKPLLEATEDVLIAQH-EEVLHNDFARMLDQNCSEDIIRM 315
Query: 226 YSLFSRV-NALESLRQALAMYIRRTGHGIV 254
Y L SR N L+ LRQ +++R+G V
Sbjct: 316 YRLMSRTPNGLQPLRQTFEEFVKRSGFAAV 345
>UNIPROTKB|F1MYD0 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:DAAA02011928 IPI:IPI01002552 RefSeq:NP_001180162.1
UniGene:Bt.6490 ProteinModelPortal:F1MYD0
Ensembl:ENSBTAT00000011513 GeneID:407228 KEGG:bta:407228
NextBio:20818478 Uniprot:F1MYD0
Length = 776
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 202/555 (36%), Positives = 297/555 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+
Sbjct: 225 LTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQ 284
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +
Sbjct: 285 DELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 246 IRRTGHGIV--MDEE--KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
I G + E D M V ++L+ + + +F+ + F + A I
Sbjct: 344 IHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFI 403
Query: 301 N------LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
N + Q+ + EL+A++ D L+ +K E ELE TL++V+V+F++I+ KDVF+
Sbjct: 404 NNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQ 463
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 412
FY K LAKRL+ SAS DAE SMISKLK CG ++T+KL+ MF+DI +SK++NE FK+
Sbjct: 464 KFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKK 523
Query: 413 SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
P ++ S+ VL++G WP LP EL F FY S++SGR+L W
Sbjct: 524 --HLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTW 581
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQ 532
L L K + L S FQ +L+ +N + Q + D+T I+ L + LQ
Sbjct: 582 LYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQIKMDILAQVLQ 641
Query: 533 SLACGKVRVLQKLPKGRD-VE-DDDSFV-FNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
L K+ VL+ D VE D+ + G+ R+ +N E +E +T +
Sbjct: 642 ILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHK 701
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREY 647
+ +DR+ + AAIVRIMK RKVL H L+ E+ QL KP +KK I+ LI++EY
Sbjct: 702 NIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEY 761
Query: 648 LERDKNNPQIYNYLA 662
LER Y+YLA
Sbjct: 762 LERVDGEKDTYSYLA 776
Score = 290 (107.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 79/273 (28%), Positives = 136/273 (49%)
Query: 2 GGNLYQRIE--KECEEHISAAIRSLVGQSPDLV--VFLSLVERCWQDLCDQMLMIRGIAL 57
GG + +E K +E + + +L+ DL+ L + W+D ++ GI
Sbjct: 79 GGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICA 138
Query: 58 YLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAV 112
YL+R +V++ + ++ + L +R L + + + +L++IE+ER GE +
Sbjct: 139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL--FRPLNKQVTNAVLKLIEKERNGETI 196
Query: 113 DRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSD 158
+ L++ +++ + LG +Y ESFE FL T FY E +++QQ+
Sbjct: 197 NTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 256
Query: 159 VPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHR 218
V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D +
Sbjct: 257 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADK 315
Query: 219 TEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
EDL RMY+L SR+ + L L++ L +I G
Sbjct: 316 NEDLGRMYNLVSRIQDGLGELKKLLETHIHNQG 348
>UNIPROTKB|E2R1V2 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:AAEX03010158 EMBL:AAEX03010159 RefSeq:XP_848402.1
ProteinModelPortal:E2R1V2 Ensembl:ENSCAFT00000005562 GeneID:475512
KEGG:cfa:475512 Uniprot:E2R1V2
Length = 776
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 202/555 (36%), Positives = 297/555 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+
Sbjct: 225 LTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQ 284
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +
Sbjct: 285 DELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 246 IRRTGHGIV--MDEE--KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
I G + E D M V ++L+ + + +F+ + F + A I
Sbjct: 344 IHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFI 403
Query: 301 N------LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
N + Q+ + EL+A++ D L+ +K E ELE TL++V+V+F++I+ KDVF+
Sbjct: 404 NNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQ 463
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 412
FY K LAKRL+ SAS DAE SMISKLK CG ++T+KL+ MF+DI +SK++NE FK+
Sbjct: 464 KFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKK 523
Query: 413 SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
P ++ S+ VL++G WP LP EL F FY S++SGR+L W
Sbjct: 524 --HLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTW 581
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQ 532
L L K + L S FQ +L+ +N + Q + D+T I+ L + LQ
Sbjct: 582 LYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQIKMDILAQVLQ 641
Query: 533 SLACGKVRVLQKLPKGRD-VE-DDDSFV-FNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
L K+ VL+ D VE D+ + G+ R+ +N E +E +T +
Sbjct: 642 ILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHK 701
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREY 647
+ +DR+ + AAIVRIMK RKVL H L+ E+ QL KP +KK I+ LI++EY
Sbjct: 702 NIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEY 761
Query: 648 LERDKNNPQIYNYLA 662
LER Y+YLA
Sbjct: 762 LERVDGEKDTYSYLA 776
Score = 290 (107.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 79/273 (28%), Positives = 136/273 (49%)
Query: 2 GGNLYQRIE--KECEEHISAAIRSLVGQSPDLV--VFLSLVERCWQDLCDQMLMIRGIAL 57
GG + +E K +E + + +L+ DL+ L + W+D ++ GI
Sbjct: 79 GGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICA 138
Query: 58 YLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAV 112
YL+R +V++ + ++ + L +R L + + + +L++IE+ER GE +
Sbjct: 139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL--FRPLNKQVTNAVLKLIEKERNGETI 196
Query: 113 DRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSD 158
+ L++ +++ + LG +Y ESFE FL T FY E +++QQ+
Sbjct: 197 NTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 256
Query: 159 VPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHR 218
V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D +
Sbjct: 257 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADK 315
Query: 219 TEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
EDL RMY+L SR+ + L L++ L +I G
Sbjct: 316 NEDLGRMYNLVSRIQDGLGELKKLLETHIHNQG 348
>UNIPROTKB|Q13616 [details] [associations]
symbol:CUL1 "Cullin-1" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS;IDA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS;IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0097193 "intrinsic apoptotic
signaling pathway" evidence=TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0008285 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0007050 GO:GO:0016567 GO:GO:0009887 GO:GO:0097193
GO:GO:0019005 GO:GO:0000084 eggNOG:COG5647 GO:GO:0031145
GO:GO:0051437 SUPFAM:SSF75632 EMBL:CH471146 GO:GO:0000080
Reactome:REACT_24941 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 PDB:1U6G PDBsum:1U6G GO:GO:0031146
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY EMBL:U58087
EMBL:AF062536 EMBL:BX537409 EMBL:AC005229 EMBL:BC125119
EMBL:BC125120 IPI:IPI00014310 RefSeq:NP_003583.2 UniGene:Hs.146806
PDB:1LDJ PDB:1LDK PDB:3RTR PDB:3TDU PDB:3TDZ PDB:4F52 PDBsum:1LDJ
PDBsum:1LDK PDBsum:3RTR PDBsum:3TDU PDBsum:3TDZ PDBsum:4F52
ProteinModelPortal:Q13616 SMR:Q13616 DIP:DIP-17013N IntAct:Q13616
MINT:MINT-120495 STRING:Q13616 PhosphoSite:Q13616 DMDM:19863257
PaxDb:Q13616 PeptideAtlas:Q13616 PRIDE:Q13616 DNASU:8454
Ensembl:ENST00000325222 Ensembl:ENST00000409469 GeneID:8454
KEGG:hsa:8454 UCSC:uc003wey.3 CTD:8454 GeneCards:GC07P148395
HGNC:HGNC:2551 HPA:CAB002676 MIM:603134 neXtProt:NX_Q13616
PharmGKB:PA27047 HOVERGEN:HBG106177 InParanoid:Q13616
OrthoDB:EOG4WH8K4 PhylomeDB:Q13616 ChiTaRS:CUL1
EvolutionaryTrace:Q13616 GenomeRNAi:8454 NextBio:31638
ArrayExpress:Q13616 Bgee:Q13616 CleanEx:HS_CUL1
Genevestigator:Q13616 GermOnline:ENSG00000055130 Uniprot:Q13616
Length = 776
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 202/555 (36%), Positives = 297/555 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+
Sbjct: 225 LTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQ 284
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +
Sbjct: 285 DELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 246 IRRTGHGIV--MDEE--KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
I G + E D M V ++L+ + + +F+ + F + A I
Sbjct: 344 IHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFI 403
Query: 301 N------LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
N + Q+ + EL+A++ D L+ +K E ELE TL++V+V+F++I+ KDVF+
Sbjct: 404 NNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQ 463
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 412
FY K LAKRL+ SAS DAE SMISKLK CG ++T+KL+ MF+DI +SK++NE FK+
Sbjct: 464 KFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKK 523
Query: 413 SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
P ++ S+ VL++G WP LP EL F FY S++SGR+L W
Sbjct: 524 --HLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTW 581
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQ 532
L L K + L S FQ +L+ +N + Q + D+T I+ L + LQ
Sbjct: 582 LYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQ 641
Query: 533 SLACGKVRVLQKLPKGRD-VE-DDDSFV-FNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
L K+ VL+ D VE D+ + G+ R+ +N E +E +T +
Sbjct: 642 ILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHK 701
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREY 647
+ +DR+ + AAIVRIMK RKVL H L+ E+ QL KP +KK I+ LI++EY
Sbjct: 702 NIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEY 761
Query: 648 LERDKNNPQIYNYLA 662
LER Y+YLA
Sbjct: 762 LERVDGEKDTYSYLA 776
Score = 290 (107.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 79/273 (28%), Positives = 136/273 (49%)
Query: 2 GGNLYQRIE--KECEEHISAAIRSLVGQSPDLV--VFLSLVERCWQDLCDQMLMIRGIAL 57
GG + +E K +E + + +L+ DL+ L + W+D ++ GI
Sbjct: 79 GGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICA 138
Query: 58 YLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAV 112
YL+R +V++ + ++ + L +R L + + + +L++IE+ER GE +
Sbjct: 139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL--FRPLNKQVTNAVLKLIEKERNGETI 196
Query: 113 DRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSD 158
+ L++ +++ + LG +Y ESFE FL T FY E +++QQ+
Sbjct: 197 NTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 256
Query: 159 VPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHR 218
V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D +
Sbjct: 257 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADK 315
Query: 219 TEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
EDL RMY+L SR+ + L L++ L +I G
Sbjct: 316 NEDLGRMYNLVSRIQDGLGELKKLLETHIHNQG 348
>UNIPROTKB|Q5R4G6 [details] [associations]
symbol:CUL1 "Cullin-1" species:9601 "Pongo abelii"
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 GeneTree:ENSGT00550000074299
KO:K03347 OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 EMBL:CR861282
RefSeq:NP_001126972.1 UniGene:Pab.18495 ProteinModelPortal:Q5R4G6
SMR:Q5R4G6 PRIDE:Q5R4G6 Ensembl:ENSPPYT00000021153 GeneID:100173991
KEGG:pon:100173991 InParanoid:Q5R4G6 Uniprot:Q5R4G6
Length = 776
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 202/555 (36%), Positives = 297/555 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+
Sbjct: 225 LTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQ 284
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +
Sbjct: 285 DELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 246 IRRTGHGIV--MDEE--KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
I G + E D M V ++L+ + + +F+ + F + A I
Sbjct: 344 IHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFI 403
Query: 301 N------LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
N + Q+ + EL+A++ D L+ +K E ELE TL++V+V+F++I+ KDVF+
Sbjct: 404 NNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQ 463
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 412
FY K LAKRL+ SAS DAE SMISKLK CG ++T+KL+ MF+DI +SK++NE FK+
Sbjct: 464 KFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKK 523
Query: 413 SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
P ++ S+ VL++G WP LP EL F FY S++SGR+L W
Sbjct: 524 --HLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTW 581
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQ 532
L L K + L S FQ +L+ +N + Q + D+T I+ L + LQ
Sbjct: 582 LYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQ 641
Query: 533 SLACGKVRVLQKLPKGRD-VE-DDDSFV-FNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
L K+ VL+ D VE D+ + G+ R+ +N E +E +T +
Sbjct: 642 ILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHK 701
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREY 647
+ +DR+ + AAIVRIMK RKVL H L+ E+ QL KP +KK I+ LI++EY
Sbjct: 702 NIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEY 761
Query: 648 LERDKNNPQIYNYLA 662
LER Y+YLA
Sbjct: 762 LERVDGEKDTYSYLA 776
Score = 290 (107.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 79/273 (28%), Positives = 136/273 (49%)
Query: 2 GGNLYQRIE--KECEEHISAAIRSLVGQSPDLV--VFLSLVERCWQDLCDQMLMIRGIAL 57
GG + +E K +E + + +L+ DL+ L + W+D ++ GI
Sbjct: 79 GGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICA 138
Query: 58 YLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAV 112
YL+R +V++ + ++ + L +R L + + + +L++IE+ER GE +
Sbjct: 139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL--FRPLNKQVTNAVLKLIEKERNGETI 196
Query: 113 DRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSD 158
+ L++ +++ + LG +Y ESFE FL T FY E +++QQ+
Sbjct: 197 NTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 256
Query: 159 VPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHR 218
V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D +
Sbjct: 257 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADK 315
Query: 219 TEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
EDL RMY+L SR+ + L L++ L +I G
Sbjct: 316 NEDLGRMYNLVSRIQDGLGELKKLLETHIHNQG 348
>MGI|MGI:1349658 [details] [associations]
symbol:Cul1 "cullin 1" species:10090 "Mus musculus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0006513 "protein monoubiquitination" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IC] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO;IDA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;IDA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1349658 GO:GO:0006915 GO:GO:0019048
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4
ChiTaRS:CUL1 EMBL:AF083216 EMBL:AF176910 EMBL:AF136441
EMBL:BC029260 IPI:IPI00124047 RefSeq:NP_036172.1 UniGene:Mm.87611
ProteinModelPortal:Q9WTX6 SMR:Q9WTX6 DIP:DIP-39799N IntAct:Q9WTX6
STRING:Q9WTX6 PhosphoSite:Q9WTX6 PaxDb:Q9WTX6 PRIDE:Q9WTX6
Ensembl:ENSMUST00000031697 GeneID:26965 KEGG:mmu:26965
UCSC:uc009bsz.1 InParanoid:Q9WTX6 NextBio:304903 Bgee:Q9WTX6
CleanEx:MM_CUL1 Genevestigator:Q9WTX6 GermOnline:ENSMUSG00000029686
Uniprot:Q9WTX6
Length = 776
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 202/555 (36%), Positives = 297/555 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+
Sbjct: 225 LTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQ 284
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +
Sbjct: 285 DELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 246 IRRTGHGIV--MDEE--KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
I G + E D M V ++L+ + + +F+ + F + A I
Sbjct: 344 IHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFI 403
Query: 301 N------LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
N + Q+ + EL+A++ D L+ +K E ELE TL++V+V+F++I+ KDVF+
Sbjct: 404 NNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQ 463
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 412
FY K LAKRL+ SAS DAE SMISKLK CG ++T+KL+ MF+DI +SK++NE FK+
Sbjct: 464 KFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKK 523
Query: 413 SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
P ++ S+ VL++G WP LP EL F FY S++SGR+L W
Sbjct: 524 --HLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTW 581
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQ 532
L L K + L S FQ +L+ +N + Q + D+T I+ L + LQ
Sbjct: 582 LYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQ 641
Query: 533 SLACGKVRVLQKLPKGRD-VE-DDDSFV-FNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
L K+ VL+ D VE D+ + G+ R+ +N E +E +T +
Sbjct: 642 ILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHK 701
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREY 647
+ +DR+ + AAIVRIMK RKVL H L+ E+ QL KP +KK I+ LI++EY
Sbjct: 702 NIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEY 761
Query: 648 LERDKNNPQIYNYLA 662
LER Y+YLA
Sbjct: 762 LERVDGEKDTYSYLA 776
Score = 290 (107.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 79/273 (28%), Positives = 136/273 (49%)
Query: 2 GGNLYQRIE--KECEEHISAAIRSLVGQSPDLV--VFLSLVERCWQDLCDQMLMIRGIAL 57
GG + +E K +E + + +L+ DL+ L + W+D ++ GI
Sbjct: 79 GGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICA 138
Query: 58 YLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAV 112
YL+R +V++ + ++ + L +R L + + + +L++IE+ER GE +
Sbjct: 139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL--FRPLNKQVTNAVLKLIEKERNGETI 196
Query: 113 DRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSD 158
+ L++ +++ + LG +Y ESFE FL T FY E +++QQ+
Sbjct: 197 NTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 256
Query: 159 VPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHR 218
V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D +
Sbjct: 257 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADK 315
Query: 219 TEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
EDL RMY+L SR+ + L L++ L +I G
Sbjct: 316 NEDLGRMYNLVSRIQDGLGELKKLLETHIHNQG 348
>RGD|1308157 [details] [associations]
symbol:Cul1 "cullin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008283 "cell proliferation" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1308157 GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009887 GO:GO:0006511 GO:GO:0019005
EMBL:CH473959 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY CTD:8454
HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4 EMBL:BC161932 IPI:IPI00358206
RefSeq:NP_001102097.1 UniGene:Rn.68078 SMR:B1WBY1 STRING:B1WBY1
Ensembl:ENSRNOT00000007620 GeneID:362356 KEGG:rno:362356
UCSC:RGD:1308157 NextBio:679624 Genevestigator:B1WBY1
Uniprot:B1WBY1
Length = 776
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 202/555 (36%), Positives = 297/555 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+
Sbjct: 225 LTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQ 284
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +
Sbjct: 285 DELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 246 IRRTGHGIV--MDEE--KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
I G + E D M V ++L+ + + +F+ + F + A I
Sbjct: 344 IHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFI 403
Query: 301 N------LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
N + Q+ + EL+A++ D L+ +K E ELE TL++V+V+F++I+ KDVF+
Sbjct: 404 NNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQ 463
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 412
FY K LAKRL+ SAS DAE SMISKLK CG ++T+KL+ MF+DI +SK++NE FK+
Sbjct: 464 KFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKK 523
Query: 413 SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
P ++ S+ VL++G WP LP EL F FY S++SGR+L W
Sbjct: 524 --HLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTW 581
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQ 532
L L K + L S FQ +L+ +N + Q + D+T I+ L + LQ
Sbjct: 582 LYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQ 641
Query: 533 SLACGKVRVLQKLPKGRD-VE-DDDSFV-FNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
L K+ VL+ D VE D+ + G+ R+ +N E +E +T +
Sbjct: 642 ILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHK 701
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREY 647
+ +DR+ + AAIVRIMK RKVL H L+ E+ QL KP +KK I+ LI++EY
Sbjct: 702 NIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEY 761
Query: 648 LERDKNNPQIYNYLA 662
LER Y+YLA
Sbjct: 762 LERVDGEKDTYSYLA 776
Score = 290 (107.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 79/273 (28%), Positives = 136/273 (49%)
Query: 2 GGNLYQRIE--KECEEHISAAIRSLVGQSPDLV--VFLSLVERCWQDLCDQMLMIRGIAL 57
GG + +E K +E + + +L+ DL+ L + W+D ++ GI
Sbjct: 79 GGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICA 138
Query: 58 YLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAV 112
YL+R +V++ + ++ + L +R L + + + +L++IE+ER GE +
Sbjct: 139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL--FRPLNKQVTNAVLKLIEKERNGETI 196
Query: 113 DRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSD 158
+ L++ +++ + LG +Y ESFE FL T FY E +++QQ+
Sbjct: 197 NTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 256
Query: 159 VPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHR 218
V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D +
Sbjct: 257 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADK 315
Query: 219 TEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
EDL RMY+L SR+ + L L++ L +I G
Sbjct: 316 NEDLGRMYNLVSRIQDGLGELKKLLETHIHNQG 348
>ASPGD|ASPL0000060435 [details] [associations]
symbol:culA species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069 SMART:SM00182
SMART:SM00884 EMBL:BN001308 GO:GO:0016874 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713 OMA:SGVINCY
EnsemblFungi:CADANIAT00001628 Uniprot:C8VU45
Length = 764
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 204/606 (33%), Positives = 321/606 (52%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTL---LNHLLKMFTALGIYS 131
D L++ K + + ++ K G IE+ R+ VD + L+ + L IY
Sbjct: 158 DFFLKVHEKVMGAVLKLVEKQRNG--ETIEQSRIKSIVDSFVSLGLDETDPTKSTLEIYR 215
Query: 132 ESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIA 191
F++PFLE T +Y E +++ + V +Y+K EIRL EE R LYL+ K L +
Sbjct: 216 YYFQRPFLEATRIYYEDESRQFVADNSVVEYMKKAEIRLEEEKARVGLYLNNDISKDLTS 275
Query: 192 TAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
T L+ H + D+ F L+D R +DL RMY L SR+ + L+ LR ++RR G
Sbjct: 276 TCLDVLVTAHSELLRDE-FQPLLDNERQDDLARMYRLLSRIKDGLDPLRTKFEAHVRRAG 334
Query: 251 HGIVM------DEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQ 304
V D + K V +LL ++ +++F+ F ++ +A +N +
Sbjct: 335 LSAVEKVAAEGDSFEPKMYVDALLSVHTRYHSLVKEAFNGESEFVRSLDNACREFVNRNK 394
Query: 305 ------NRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKD 358
+ EL+AK+ D L+ G+K E ELE L +++ +F++I+ KDVF+ FY K
Sbjct: 395 ICKSGSTKTPELLAKYTDSLLKRGSKAAEESELEEMLVQIMTVFKYIEDKDVFQKFYSKM 454
Query: 359 LAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ------ 412
LAKRL+ S S DAE SMISKLK CG ++TNKL+ MF+DI++SK++N S+K
Sbjct: 455 LAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKDLNSSYKDWLEKSF 514
Query: 413 -SSQARTKLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRL 470
R KL ++ +L TG+WP T P P E+ + F++FY K++GR+L
Sbjct: 515 LDDDDRKKL---VDSHFQILGTGFWPLTAPSTSFLAPPEIVKTSERFQKFYCDKHNGRKL 571
Query: 471 MWQNSLGHCVLKAEFPKGKK---ELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKEL 527
W L LKA + K K VS +Q +L+LFN++ L++ DI+ AT + + L
Sbjct: 572 TWLWQLCKGELKANYIKNTKVPYTFLVSTYQMGILLLFNESDTLTYSDIQKATTLTPEIL 631
Query: 528 RRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTST 587
L K +VL P+G D +F N F ++ +N IQ++ + T
Sbjct: 632 DPNLSIFL--KAKVLNISPEGSKPGPDSTFSLNYNFKNKKIKVNLN-IQIRSEQKVETDD 688
Query: 588 TERVFQ-DRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLID 644
T + + DR+ + +AIVRIMK+RK + H L+ E+ Q+K FP + D+KK IE+L++
Sbjct: 689 THKTIEEDRKLLLQSAIVRIMKSRKKMKHVQLVQEVIHQVKSRFPPQVPDIKKNIEALME 748
Query: 645 REYLER 650
++Y+ER
Sbjct: 749 KDYIER 754
Score = 288 (106.4 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 86/312 (27%), Positives = 151/312 (48%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+G LY+++ + H+ +G + + + LS R WQ I + YL+
Sbjct: 72 LGEELYRKLGEYLSRHLEWVHGESMGHTDEAL--LSFYIREWQRYTTAAKYINHLFRYLN 129
Query: 61 RTYVKQT--PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTG-LLRMIERERLGEAVDRTLL 117
R +VK+ ++++D+ Q K+ + H+ V G +L+++E++R GE ++++ +
Sbjct: 130 RHWVKREIDEGKKNVYDVYTQHLVKWKEDFFLKVHEKVMGAVLKLVEKQRNGETIEQSRI 189
Query: 118 NHLLKMFTALG------------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKH 165
++ F +LG IY F++PFLE T +Y E +++ + V +Y+K
Sbjct: 190 KSIVDSFVSLGLDETDPTKSTLEIYRYYFQRPFLEATRIYYEDESRQFVADNSVVEYMKK 249
Query: 166 VEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRM 225
EIRL EE R LYL+ K L +T L+ H + D+ F L+D R +DL RM
Sbjct: 250 AEIRLEEEKARVGLYLNNDISKDLTSTCLDVLVTAHSELLRDE-FQPLLDNERQDDLARM 308
Query: 226 YSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSK 284
Y L SR+ + L+ LR ++RR G V + D E K +D + S
Sbjct: 309 YRLLSRIKDGLDPLRTKFEAHVRRAGLSAVEKVAAEGDS----FEPKMYVDAL----LSV 360
Query: 285 NEAFCNTIKDAF 296
+ + + +K+AF
Sbjct: 361 HTRYHSLVKEAF 372
>DICTYBASE|DDB_G0291972 [details] [associations]
symbol:culA "cullin A" species:44689 "Dictyostelium
discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0291972 GO:GO:0030154
GenomeReviews:CM000155_GR GO:GO:0000082 EMBL:AAFI02000187
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030587 GO:GO:0006935
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647
SUPFAM:SSF75632 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
OMA:SGVINCY EMBL:AF020287 RefSeq:XP_629756.1 HSSP:Q13616
ProteinModelPortal:O60999 SMR:O60999 STRING:O60999
EnsemblProtists:DDB0185191 GeneID:8628431 KEGG:ddi:DDB_G0291972
ProtClustDB:CLSZ2429454 Uniprot:O60999
Length = 770
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 193/558 (34%), Positives = 305/558 (54%)
Query: 125 TALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVS 184
T L +Y FE+ FL T +Y E K++ ++ V DY+K VE RL+EE +R YL +
Sbjct: 214 TILQVYKSGFEELFLTATENYYTNESAKFISENSVADYMKKVETRLNEEVKRVQQYLHQN 273
Query: 185 TRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALA 243
T LIA E+ L+E+H+ I ++ F L++ + DL RMYSL SR+ LE LR L
Sbjct: 274 TESELIAKCEKVLIEKHVEVIWNE-FQTLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLE 332
Query: 244 MYIRRTGHGIVMDEEKD-----KDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEY 298
+++ G V + K + +LL+ + + +F + F ++ A
Sbjct: 333 KHVQNVGLQAVSSIATNGVIEPKVYIETLLKVFKKYNELVTGAFRSDTGFVASLDKACRR 392
Query: 299 LINLR--------QNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDV 350
IN ++ EL+A+F D L+ E E+E L+ V+++F++I+ KDV
Sbjct: 393 FINENAVTIAAKSSSKSPELLARFTDFLLKKSPNNPEESEMEQLLNDVMIVFKYIEDKDV 452
Query: 351 FEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF 410
F+ FY K LAKRL+ G S S D E +MI KLK+ CG ++T+KL+ MF D+ LS+E+ + F
Sbjct: 453 FQDFYSKMLAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLSRELLDRF 512
Query: 411 KQSSQARTKLPSGIEMSVHVLTTGYWPTYPPM-DVRLPHELNVYQDIFKEFYLSKYSGRR 469
+ + I+ SV VL TG WP PP + +P EL + +F++FY +++SGR+
Sbjct: 513 NNHIEQVERSSLNIDFSVLVLATGSWPLQPPSTNFSIPKELQACEQLFQKFYQNQHSGRK 572
Query: 470 LMWQNSLGHCVLKAEFPKGKKE---LAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKE 526
L W + L LK ++ + K L S +Q VL+ FN + L+ ++I+++T + D
Sbjct: 573 LNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSV 632
Query: 527 LRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTS 586
L+ TL SLA K+ + ++ F N+ F +I +N + + EE S
Sbjct: 633 LKGTLTSLAKSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDS 692
Query: 587 TTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQL--KFPIKPADLKKRIESLID 644
+ V +DR+ Q+ AAIVRIMK RK L+H+ L+TE+ QL +F K +KK I+ LI+
Sbjct: 693 IHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIE 752
Query: 645 REYLERDKNNPQIYNYLA 662
+EYL R + Y+Y+A
Sbjct: 753 KEYLMRVEGKKDHYSYVA 770
Score = 284 (105.0 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 76/268 (28%), Positives = 135/268 (50%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+G +LY R+ ++H+S ++ + + ++ E W M I I Y++
Sbjct: 77 VGEDLYNRLNLFLKKHMSQLLKLTETKMDEPLLNYYYTE--WDRYTSAMKYINNIFQYMN 134
Query: 61 RTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRT 115
R ++K+ V ++ + L ++R L ++ ++ + LL +IE ER G ++
Sbjct: 135 RYWIKREIDDGKKEVYEIFILSLVIWRDCL--FTPLKQRLTNSLLDIIESERNGYQINTH 192
Query: 116 LLNHLLKMFTALG------------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYL 163
L+ ++ + +LG +Y FE+ FL T +Y E K++ ++ V DY+
Sbjct: 193 LIKGVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNESAKFISENSVADYM 252
Query: 164 KHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQ 223
K VE RL+EE +R YL +T LIA E+ L+E+H+ I ++ F L++ + DL
Sbjct: 253 KKVETRLNEEVKRVQQYLHQNTESELIAKCEKVLIEKHVEVIWNE-FQTLLEKDKIPDLT 311
Query: 224 RMYSLFSRV-NALESLRQALAMYIRRTG 250
RMYSL SR+ LE LR L +++ G
Sbjct: 312 RMYSLLSRIPRGLEPLRTTLEKHVQNVG 339
>ZFIN|ZDB-GENE-040426-2887 [details] [associations]
symbol:cul1b "cullin 1b" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-040426-2887 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX005392
IPI:IPI00609210 Ensembl:ENSDART00000134947 ArrayExpress:F1Q7M5
Bgee:F1Q7M5 Uniprot:F1Q7M5
Length = 775
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 203/556 (36%), Positives = 295/556 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y E FE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+
Sbjct: 223 LSVYKEYFEAQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQ 282
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +
Sbjct: 283 DELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLESH 341
Query: 246 IRRTGHGIVM---DEE-KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTI-KDAFEYL 299
I G + D D M V + L+ + + +F+ + F + K A
Sbjct: 342 IHNQGLAAIEKCGDSALNDPKMYVQTTLDVHKKYNALVMSAFNNDAGFVAALDKVACGRF 401
Query: 300 IN------LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVF 351
IN + Q+ + EL+A++ D L+ +K E ELE TL++V+V+F++I+ KDVF
Sbjct: 402 INNNAVTRMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVF 461
Query: 352 EAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFK 411
+ FY K LAKRL+ SAS DAE SMISKLK CG ++T+KL+ MF+DI +SK++NE FK
Sbjct: 462 QKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFK 521
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLM 471
+ P ++ S+ VL++G WP LP EL F FY S++SGR+L
Sbjct: 522 K--HLSNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLT 579
Query: 472 WQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTL 531
W L L K + L S FQ +L+ FN S Q + D+T I+ L + L
Sbjct: 580 WLYHLSKGELVTNCFKNRYTLQASTFQMAILLQFNTENCYSVQQLADSTQIKTDILVQVL 639
Query: 532 QSLACGKVRVLQKLPKGRDVED--DDSFV-FNEGFTAPLYRIKVNAIQMKETVEENTSTT 588
Q L K+ VL+ D D D+ + G+ R+ +N E +E +T
Sbjct: 640 QILLKSKLLVLEDENANIDEMDFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTH 699
Query: 589 ERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDRE 646
+ + +DR+ + AAIVRIMK RKVL H L+ E+ QL KP +KK I+ LI++E
Sbjct: 700 KNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKE 759
Query: 647 YLERDKNNPQIYNYLA 662
YLER Y+YLA
Sbjct: 760 YLERVDGEKDTYSYLA 775
Score = 280 (103.6 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 76/273 (27%), Positives = 137/273 (50%)
Query: 2 GGNLYQRIE--KECEEHISAAIRSLVGQSPDLV--VFLSLVERCWQDLCDQMLMIRGIAL 57
GG + +E K ++ + + + +L+ DL+ L + W+D ++ GI
Sbjct: 77 GGAQFVGLELYKRLKDFLRSYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLDGICA 136
Query: 58 YLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAV 112
YL+R +V++ + ++ + L +R+ L + + + +L+++E+ER GE +
Sbjct: 137 YLNRHWVRRECDEGRKGIYEIYSLALVTWRECL--FRPLNKQVTNAVLKLVEKERNGETI 194
Query: 113 DRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSD 158
+ L++ +++ + LG +Y E FE FL T FY E +++QQ+
Sbjct: 195 NTRLVSGVVQSYVELGLNEDDAFVKGPTLSVYKEYFEAQFLADTERFYTRESTEFLQQNP 254
Query: 159 VPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHR 218
V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D +
Sbjct: 255 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADK 313
Query: 219 TEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
EDL RMY+L SR+ + L L++ L +I G
Sbjct: 314 NEDLGRMYNLVSRITDGLGELKKLLESHIHNQG 346
>UNIPROTKB|F1SAD7 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SGVINCY EMBL:CU915471
EMBL:FP565440 Ensembl:ENSSSCT00000016837 Uniprot:F1SAD7
Length = 778
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 202/556 (36%), Positives = 297/556 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y ESFE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+
Sbjct: 225 LTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQ 284
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +
Sbjct: 285 DELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 246 IRRTGHGIV--MDEE--KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
I G + E D M V ++L+ + + +F+ + F + A I
Sbjct: 344 IHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFI 403
Query: 301 N------LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
N + Q+ + EL+A++ D L+ +K E ELE TL++V+V+F++I+ KDVF+
Sbjct: 404 NNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQ 463
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMIS-KLKTECGSQFTNKLEGMFKDIELSKEINESFK 411
FY K LAK L+ SAS DAE SMIS KLK CG ++T+KL+ MF+DI +SK++NE FK
Sbjct: 464 KFYAKMLAK-LVHQNSASDDAEASMISNKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFK 522
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLM 471
+ L S ++ S+ VL++G WP LP EL F FY S++SGR+L
Sbjct: 523 KHLTNSEPLDSPVDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLT 582
Query: 472 WQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTL 531
W L L K + L S FQ +L+ +N + Q + D+T I+ L + L
Sbjct: 583 WLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQIKMDILAQVL 642
Query: 532 QSLACGKVRVLQKLPKGRD-VE-DDDSFV-FNEGFTAPLYRIKVNAIQMKETVEENTSTT 588
Q L K+ VL+ D VE D+ + G+ R+ +N E +E +T
Sbjct: 643 QILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTH 702
Query: 589 ERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDRE 646
+ + +DR+ + AAIVRIMK RKVL H L+ E+ QL KP +KK I+ LI++E
Sbjct: 703 KNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKE 762
Query: 647 YLERDKNNPQIYNYLA 662
YLER Y+YLA
Sbjct: 763 YLERVDGEKDTYSYLA 778
Score = 290 (107.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 79/273 (28%), Positives = 136/273 (49%)
Query: 2 GGNLYQRIE--KECEEHISAAIRSLVGQSPDLV--VFLSLVERCWQDLCDQMLMIRGIAL 57
GG + +E K +E + + +L+ DL+ L + W+D ++ GI
Sbjct: 79 GGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICA 138
Query: 58 YLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAV 112
YL+R +V++ + ++ + L +R L + + + +L++IE+ER GE +
Sbjct: 139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL--FRPLNKQVTNAVLKLIEKERNGETI 196
Query: 113 DRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSD 158
+ L++ +++ + LG +Y ESFE FL T FY E +++QQ+
Sbjct: 197 NTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 256
Query: 159 VPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHR 218
V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D +
Sbjct: 257 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADK 315
Query: 219 TEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
EDL RMY+L SR+ + L L++ L +I G
Sbjct: 316 NEDLGRMYNLVSRIQDGLGELKKLLETHIHNQG 348
>ZFIN|ZDB-GENE-030131-2603 [details] [associations]
symbol:cul1a "cullin 1a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-2603 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 HSSP:Q9JLV5 EMBL:BC045445
IPI:IPI00495948 UniGene:Dr.76883 ProteinModelPortal:Q7ZVR2
SMR:Q7ZVR2 STRING:Q7ZVR2 InParanoid:Q7ZVR2 ArrayExpress:Q7ZVR2
Uniprot:Q7ZVR2
Length = 777
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 199/555 (35%), Positives = 293/555 (52%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y E FE FL T FY E +++QQ+ V +Y+K E RL EE R +YL ST+
Sbjct: 226 LSVYKEYFETQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQ 285
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L E+ L+E+H+ I F L+D + EDL RMY+L SR+ + L L++ L +
Sbjct: 286 DELARKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETH 344
Query: 246 IRRTGHGIV--MDEE--KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
I G + E D M V ++L+ + + +F+ + F + A I
Sbjct: 345 IYNQGLAAIEKCGESALNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFI 404
Query: 301 NLR--------QNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
N ++ EL+A++ D L+ +K E ELE TL++V+V+F++I+ KDVF+
Sbjct: 405 NNNAVTKMVQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQ 464
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 412
FY K LAKRL+ SAS DAE SMISKLK CG ++T+KL+ MF+DI +SK++NE FK+
Sbjct: 465 KFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKK 524
Query: 413 SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
P ++ S+ VL++G WP LP EL F FY S++SGR+L W
Sbjct: 525 --HLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTW 582
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQ 532
L L K + L S FQ +L+ +N + Q + D+T I+ L + LQ
Sbjct: 583 LYHLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDVYTVQQLTDSTQIKIDILVQVLQ 642
Query: 533 SLACGKVRVLQKLPKGRD-VE-DDDSFV-FNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
L K+ VL+ D VE D+ + G+ R+ +N E +E +T +
Sbjct: 643 ILLKSKLLVLEDENANVDEVEFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHK 702
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREY 647
+ +DR+ + AAIVR MK RKVL H L+ E+ QL KP +KK I+ LI++EY
Sbjct: 703 NIEEDRKLLIQAAIVRTMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEY 762
Query: 648 LERDKNNPQIYNYLA 662
LER Y+YLA
Sbjct: 763 LERVDGEKDTYSYLA 777
Score = 280 (103.6 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 78/273 (28%), Positives = 135/273 (49%)
Query: 2 GGNLYQRIE--KECEEHISAAIRSLVGQSPDLV--VFLSLVERCWQDLCDQMLMIRGIAL 57
GG + +E K +E + + +L+ DL+ L + W+D ++ GI
Sbjct: 80 GGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICA 139
Query: 58 YLDRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAV 112
YL+R +V++ ++ + L +R+ L + + + +L++IE+ER GE +
Sbjct: 140 YLNRHWVRRECDEGRKGTYEIYSLALVTWRECL--FRPLNKQVTNAVLKLIEKERNGETI 197
Query: 113 DRTLLNHLLKMFTALG--------------IYSESFEKPFLECTSEFYAAEGMKYMQQSD 158
+ L++ +++ + LG +Y E FE FL T FY E +++QQ+
Sbjct: 198 NTRLISGVVQSYVELGLNEDDAFAKGPTLSVYKEYFETQFLADTERFYTRESTEFLQQNP 257
Query: 159 VPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHR 218
V +Y+K E RL EE R +YL ST+ L E+ L+E+H+ I F L+D +
Sbjct: 258 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLE-IFHTEFQNLLDADK 316
Query: 219 TEDLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
EDL RMY+L SR+ + L L++ L +I G
Sbjct: 317 NEDLGRMYNLVSRITDGLGELKKLLETHIYNQG 349
>ZFIN|ZDB-GENE-030131-8032 [details] [associations]
symbol:cul2 "cullin 2" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0001944 "vasculature development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 ZFIN:ZDB-GENE-030131-8032
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009790 GO:GO:0006511
GO:GO:0001944 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX294164
IPI:IPI00998382 Ensembl:ENSDART00000013257 ArrayExpress:F1Q690
Bgee:F1Q690 Uniprot:F1Q690
Length = 764
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 187/610 (30%), Positives = 329/610 (53%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------- 125
++ L ++RK + ++ + LL+ I+ +R GE ++ +++ ++ F
Sbjct: 160 ELALDMWRKLM--IEPLQPMLIGKLLKEIKNDRCGEDPNQKVIHGVINSFVHVEQYKKKF 217
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVST 185
L Y E FE PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 218 PLKFYQEIFEGPFLTKTGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEVRCRKYLHPSS 277
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAM 244
+I +++++ H+ + + ++ R +D+ MY+L V++ L + Q L +
Sbjct: 278 YSKVIHECQQRMVADHLQFLHGECQNIIRQEKR-DDMANMYTLLRAVSSGLPHMIQELQV 336
Query: 245 YIRRTG--HGIVMDEEKDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN 301
+I G I + +E + V S+LE + + + ++ F + + A ++N
Sbjct: 337 HIHDEGIRATINLSQENMPTLFVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVN 396
Query: 302 LRQNRPA----ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
R+ + EL+AK+ D L+ KG +E E+E L + +F++I KDVF+ Y +
Sbjct: 397 YREPKSICKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKIYAR 456
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
LAKRL+ G S S+D+E++MI+KLK CG +FT+KL M+ D+ +S ++N F + +
Sbjct: 457 MLAKRLIHGLSLSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSTDLNNKFNNFIKTQ 516
Query: 418 -TKLPSGIEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQN 474
T + GI ++VL G WP T+ P +P EL +F+ FY +SGR+L W +
Sbjct: 517 ETVVDLGISFQIYVLQAGAWPLTHVPSSTFAIPQELEKSVQMFELFYNQHFSGRKLTWLH 576
Query: 475 SLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSL 534
L +K + V+ +Q VL+ FN+++ +S+++++D+T + +KEL++T++SL
Sbjct: 577 YLCTGEVKMNYLSKPYVAVVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELQKTIKSL 636
Query: 535 ACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQD 594
K+ + L K ++E + +F FT+ + K+ K+T +E T V +D
Sbjct: 637 LDVKM-ISHDLQK-EEIEPESTFSLIMSFTSKRTKFKITTSMQKDTPQELEQTRSAVDED 694
Query: 595 RQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDK 652
R+ + AAIVRIMK RKVL H LI E+ Q K P+ +KK IE LID++Y+ER +
Sbjct: 695 RKMYLQAAIVRIMKARKVLRHNALIQEVINQSKARFNPSISMIKKCIEVLIDKQYIERSQ 754
Query: 653 NNPQIYNYLA 662
++ Y+Y+A
Sbjct: 755 SSADEYSYVA 764
>UNIPROTKB|E2QRU7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03870 OMA:VMLDYVE CTD:8453
EMBL:AAEX03001145 RefSeq:XP_535140.2 Ensembl:ENSCAFT00000005971
GeneID:477952 KEGG:cfa:477952 NextBio:20853352 Uniprot:E2QRU7
Length = 745
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 188/611 (30%), Positives = 325/611 (53%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------- 125
++ L ++RK + ++ + LLR I+ +R GE ++ +++ ++ F
Sbjct: 141 ELALDMWRKLM--VEPLQTILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKF 198
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVST 185
L Y E FE PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 199 PLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSS 258
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAM 244
+I +++++ H+ + + ++ + D+ MY L V+ L + Q L
Sbjct: 259 YTKVIHECQQRMVADHLQFLHAECHNIIRQ-EKKNDMANMYVLLRAVSTGLPHMIQELQN 317
Query: 245 YIRRTG---HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN 301
+I+ G + E V S+LE + + ++ F + + A ++N
Sbjct: 318 HIQDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN 377
Query: 302 LRQNRPA----ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
R+ + EL+AK+ D L+ KG +E E+E L + +F++I KDVF+ FY +
Sbjct: 378 YREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYAR 437
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
LAKRL+ G S S+D+E++MI+KLK CG +FT+KL M+ D+ +S ++N F + +
Sbjct: 438 MLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQ 497
Query: 418 -TKLPSGIEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQN 474
T + GI ++VL G WP T P +P EL +F+ FY +SGR+L W +
Sbjct: 498 DTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLH 557
Query: 475 SLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQS 533
L +K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++S
Sbjct: 558 YLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKS 616
Query: 534 LACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQ 593
L V+++ + D++ + SF N F++ + K+ K+T +E T V +
Sbjct: 617 LL--DVKMINHDSEKEDIDTESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDE 674
Query: 594 DRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERD 651
DR+ + AAIVRIMK RKVL H LI E+ Q + P+ +KK IE LID++Y+ER
Sbjct: 675 DRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERS 734
Query: 652 KNNPQIYNYLA 662
+ + Y+Y+A
Sbjct: 735 QASADEYSYVA 745
>UNIPROTKB|Q13617 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IDA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 Reactome:REACT_120956 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 EMBL:CH471072 GO:GO:0006511 GO:GO:0097193
eggNOG:COG5647 SUPFAM:SSF75632 Pathway_Interaction_DB:hif1apathway
GO:GO:0061418 GO:GO:0031462 GO:GO:0031625 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE
EMBL:U83410 EMBL:AF126404 EMBL:AK095217 EMBL:AK300491 EMBL:AL392046
EMBL:BC009591 EMBL:BC110901 EMBL:U58088 IPI:IPI00014311
IPI:IPI00985090 RefSeq:NP_001185706.1 RefSeq:NP_001185707.1
RefSeq:NP_001185708.1 RefSeq:NP_003582.2 UniGene:Hs.82919
ProteinModelPortal:Q13617 SMR:Q13617 DIP:DIP-31612N IntAct:Q13617
MINT:MINT-1523339 STRING:Q13617 PhosphoSite:Q13617 DMDM:19863260
PaxDb:Q13617 PRIDE:Q13617 DNASU:8453 Ensembl:ENST00000374748
Ensembl:ENST00000374749 Ensembl:ENST00000374751
Ensembl:ENST00000537177 GeneID:8453 KEGG:hsa:8453 UCSC:uc001ixv.3
CTD:8453 GeneCards:GC10M035338 HGNC:HGNC:2552 HPA:CAB002677
HPA:HPA024578 MIM:603135 neXtProt:NX_Q13617 PharmGKB:PA27048
InParanoid:Q13617 OrthoDB:EOG4Z0B51 PhylomeDB:Q13617 ChiTaRS:CUL2
GenomeRNAi:8453 NextBio:31634 ArrayExpress:Q13617 Bgee:Q13617
CleanEx:HS_CUL2 Genevestigator:Q13617 GermOnline:ENSG00000108094
Uniprot:Q13617
Length = 745
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 188/611 (30%), Positives = 324/611 (53%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------- 125
++ L ++RK + ++ + LLR I+ +R GE ++ +++ ++ F
Sbjct: 141 ELALDMWRKLM--VEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKF 198
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVST 185
L Y E FE PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 199 PLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSS 258
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAM 244
+I +++++ H+ + + ++ + D+ MY L V+ L + Q L
Sbjct: 259 YTKVIHECQQRMVADHLQFLHAECHNIIRQ-EKKNDMANMYVLLRAVSTGLPHMIQELQN 317
Query: 245 YIRRTG---HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN 301
+I G + E V S+LE + + ++ F + + A ++N
Sbjct: 318 HIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN 377
Query: 302 LRQNRPA----ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
R+ + EL+AK+ D L+ KG +E E+E L + +F++I KDVF+ FY +
Sbjct: 378 YREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYAR 437
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
LAKRL+ G S S+D+E++MI+KLK CG +FT+KL M+ D+ +S ++N F + +
Sbjct: 438 MLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQ 497
Query: 418 -TKLPSGIEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQN 474
T + GI ++VL G WP T P +P EL +F+ FY +SGR+L W +
Sbjct: 498 DTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLH 557
Query: 475 SLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQS 533
L +K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++S
Sbjct: 558 YLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKS 616
Query: 534 LACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQ 593
L V+++ + D++ + SF N F++ + K+ K+T +E T V +
Sbjct: 617 LL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDE 674
Query: 594 DRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERD 651
DR+ + AAIVRIMK RKVL H LI E+ Q + P+ +KK IE LID++Y+ER
Sbjct: 675 DRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERS 734
Query: 652 KNNPQIYNYLA 662
+ + Y+Y+A
Sbjct: 735 QASADEYSYVA 745
>UNIPROTKB|Q5T2B7 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176713 HOVERGEN:HBG106177 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00647073
SMR:Q5T2B7 Ensembl:ENST00000374754 Uniprot:Q5T2B7
Length = 688
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 188/611 (30%), Positives = 324/611 (53%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------- 125
++ L ++RK + ++ + LLR I+ +R GE ++ +++ ++ F
Sbjct: 84 ELALDMWRKLM--VEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKF 141
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVST 185
L Y E FE PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 142 PLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSS 201
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAM 244
+I +++++ H+ + + ++ + D+ MY L V+ L + Q L
Sbjct: 202 YTKVIHECQQRMVADHLQFLHAECHNIIRQ-EKKNDMANMYVLLRAVSTGLPHMIQELQN 260
Query: 245 YIRRTG---HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN 301
+I G + E V S+LE + + ++ F + + A ++N
Sbjct: 261 HIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN 320
Query: 302 LRQNRPA----ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
R+ + EL+AK+ D L+ KG +E E+E L + +F++I KDVF+ FY +
Sbjct: 321 YREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYAR 380
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
LAKRL+ G S S+D+E++MI+KLK CG +FT+KL M+ D+ +S ++N F + +
Sbjct: 381 MLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQ 440
Query: 418 -TKLPSGIEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQN 474
T + GI ++VL G WP T P +P EL +F+ FY +SGR+L W +
Sbjct: 441 DTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLH 500
Query: 475 SLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQS 533
L +K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++S
Sbjct: 501 YLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKS 559
Query: 534 LACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQ 593
L V+++ + D++ + SF N F++ + K+ K+T +E T V +
Sbjct: 560 LL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDE 617
Query: 594 DRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERD 651
DR+ + AAIVRIMK RKVL H LI E+ Q + P+ +KK IE LID++Y+ER
Sbjct: 618 DRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERS 677
Query: 652 KNNPQIYNYLA 662
+ + Y+Y+A
Sbjct: 678 QASADEYSYVA 688
>UNIPROTKB|Q08DE9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:DAAA02035372 EMBL:BC123787 EMBL:BC150023 IPI:IPI00704669
RefSeq:NP_001070377.1 UniGene:Bt.38802 STRING:Q08DE9
Ensembl:ENSBTAT00000055001 GeneID:535219 KEGG:bta:535219
InParanoid:Q08DE9 NextBio:20876664 Uniprot:Q08DE9
Length = 745
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 188/611 (30%), Positives = 324/611 (53%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------- 125
++ L ++RK + ++ + LLR I+ +R GE ++ +++ ++ F
Sbjct: 141 ELALDMWRKLM--VEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKF 198
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVST 185
L Y E FE PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 199 PLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSS 258
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAM 244
+I +++++ H+ + + ++ + D+ MY L V+ L + Q L
Sbjct: 259 YTKVIHECQQRMVADHLQFLHAECHNIIRQ-EKKNDMANMYVLLRAVSTGLPHMIQELQN 317
Query: 245 YIRRTG---HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN 301
+I G + E V S+LE + + ++ F + + A ++N
Sbjct: 318 HIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN 377
Query: 302 LRQNRPA----ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
R+ + EL+AK+ D L+ KG +E E+E L + +F++I KDVF+ FY +
Sbjct: 378 YREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYAR 437
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
LAKRL+ G S S+D+E++MI+KLK CG +FT+KL M+ D+ +S ++N F + +
Sbjct: 438 MLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQ 497
Query: 418 -TKLPSGIEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQN 474
T + GI ++VL G WP T P +P EL +F+ FY +SGR+L W +
Sbjct: 498 DTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLH 557
Query: 475 SLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQS 533
L +K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++S
Sbjct: 558 YLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKS 616
Query: 534 LACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQ 593
L V+++ + D++ + SF N F++ + K+ K+T +E T V +
Sbjct: 617 LL--DVKMINHDSEKEDIDVESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDE 674
Query: 594 DRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERD 651
DR+ + AAIVRIMK RKVL H LI E+ Q + P+ +KK IE LID++Y+ER
Sbjct: 675 DRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERS 734
Query: 652 KNNPQIYNYLA 662
+ + Y+Y+A
Sbjct: 735 QASADEYSYVA 745
>MGI|MGI:1918995 [details] [associations]
symbol:Cul2 "cullin 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0030891
"VCB complex" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1918995 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0030163 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:AK016520 EMBL:AK160597 EMBL:BC026779 EMBL:BC027428
EMBL:BC025902 IPI:IPI00387216 IPI:IPI00387217 RefSeq:NP_083678.2
UniGene:Mm.291707 UniGene:Mm.443148 ProteinModelPortal:Q9D4H8
SMR:Q9D4H8 IntAct:Q9D4H8 STRING:Q9D4H8 PhosphoSite:Q9D4H8
PaxDb:Q9D4H8 PRIDE:Q9D4H8 Ensembl:ENSMUST00000025073
Ensembl:ENSMUST00000162301 GeneID:71745 KEGG:mmu:71745
UCSC:uc008dxz.2 InParanoid:Q9D4H8 NextBio:334387 Bgee:Q9D4H8
CleanEx:MM_CUL2 Genevestigator:Q9D4H8 GermOnline:ENSMUSG00000024231
Uniprot:Q9D4H8
Length = 745
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 186/611 (30%), Positives = 325/611 (53%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------- 125
++ L ++RK + +++ + LLR I+ +R GE ++ +++ ++ F
Sbjct: 141 ELALDMWRKLM--VEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKF 198
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVST 185
L Y F PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 199 PLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSS 258
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAM 244
+I +++++ H+ + + +++ R D+ MY L V++ L + + L
Sbjct: 259 YTKVIHECQQRMVADHLQFLHSECHSIIQQ-ERKNDMANMYVLLRAVSSGLPHMIEELQK 317
Query: 245 YIRRTG---HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN 301
+I G + E V S+LE + + ++ F + + A ++N
Sbjct: 318 HIHDEGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN 377
Query: 302 LRQNRPA----ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
R+ + EL+AK+ D L+ KG +E E+E L + +F++I KDVF+ FY +
Sbjct: 378 YREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYAR 437
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
LAKRL+ G S S+D+E++MI+KLK CG +FT+KL M+ D+ +S ++N F + +
Sbjct: 438 MLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQ 497
Query: 418 -TKLPSGIEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQN 474
T + GI ++VL G WP T P +P EL +F+ FY +SGR+L W +
Sbjct: 498 DTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLH 557
Query: 475 SLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQS 533
L +K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++S
Sbjct: 558 YLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKS 616
Query: 534 LACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQ 593
L V+++ + D++ + SF N F++ + K+ K+T +E T V +
Sbjct: 617 LL--DVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDE 674
Query: 594 DRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERD 651
DR+ + AAIVRIMK RKVL H LI E+ Q + P+ +KK IE LID++Y+ER
Sbjct: 675 DRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERS 734
Query: 652 KNNPQIYNYLA 662
+ + Y+Y+A
Sbjct: 735 QASADEYSYVA 745
>UNIPROTKB|G3N0Q3 [details] [associations]
symbol:G3N0Q3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:NDYHERS EMBL:DAAA02010429
PRIDE:G3N0Q3 Ensembl:ENSBTAT00000063692 NextBio:20878225
Uniprot:G3N0Q3
Length = 767
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 191/556 (34%), Positives = 295/556 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L +Y E+FE FL T +Y + + +QQ+ V +Y+K VE L EE R +YL S++
Sbjct: 216 LTVYKEAFESQFLADTERYYTRKSTELLQQNPVTEYMKKVEALLLEERRRARVYLHQSSK 275
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMY 245
L + L+E+H+ L + F L++ +++EDL RMY L R+ N L ++ L +
Sbjct: 276 GKLARKCRQVLVEKHLEIFLTE-FQNLLNANKSEDLGRMYRLIYRIKNGLGEFKKILETH 334
Query: 246 IRRTGHGIVMD--EE--KDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLI 300
I G + + E D M V ++L + + +F + F + A I
Sbjct: 335 IHNQGLSAIEECGEAALNDPRMYVETVLNIHKKYNALVISAFRNHADFVAALDKACSGFI 394
Query: 301 N------LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
N + Q+ + EL+A++ D L+ +K E ELE TL+ V+ +F+++ KDV +
Sbjct: 395 NNNAVTKMAQSSSKSPELLAQYCDSLLKKSSKNPEEAELEDTLNHVMTVFKYMDDKDVVQ 454
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 412
FY K LAKRL+ SAS DAE SM+SKLK CG ++T+KL+ MF+DI +SK +N FK+
Sbjct: 455 KFYTKMLAKRLVHQNSASDDAEASMVSKLKQACGFEYTSKLQRMFQDIGVSKALNAQFKK 514
Query: 413 SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
P ++ S+HVL+ G+WP V LP EL F FY S YS R+L W
Sbjct: 515 --HLMDSEPLDLDFSIHVLSYGWWPFEESCTVLLPSELEPCYRRFTAFYASCYSDRKLSW 572
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQ 532
L L + K L VS FQ +L+ +N + Q + D+T I+ + + LQ
Sbjct: 573 AYQLSEGELVTNYFKNNYTLRVSTFQMAILLQYNTEDAYTIQQLMDSTQIKMDIVAQVLQ 632
Query: 533 SLACGKVRVLQ-KLPKGRDVE-DDDSFV-FNEGFTAPLYRIKVNAIQMK-ETVEENTSTT 588
L K+ VL+ K +VE D+ + + G+ + R+ ++ + MK E E +
Sbjct: 633 ILLKFKLLVLEDKSANVDEVELKPDTLIKLHFGYKSKKLRVNIS-LPMKIEQKREQETMY 691
Query: 589 ERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLIDRE 646
+ + +DR+ + AAIVRIMK RKV+ H L+ E+ QL KP + +KK I+ LI++E
Sbjct: 692 KNIEEDRKLLIQAAIVRIMKMRKVVKHQQLLGEVATQLSSVFKPQISVIKKCIDILIEKE 751
Query: 647 YLERDKNNPQIYNYLA 662
YLER + Y+YLA
Sbjct: 752 YLERVGDEKDTYSYLA 767
Score = 256 (95.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 72/271 (26%), Positives = 134/271 (49%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDL--VVFLSLVERCWQDLCDQMLMIRGIALY 58
+G LY+RI++ + H++ +L DL + L + W+D ++ GI
Sbjct: 76 VGFELYKRIKEFLKNHLT----NLPKDGEDLMDIGILKFYTQQWEDYQFSSKVLNGICAR 131
Query: 59 LDRTYVKQTPN----VRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDR 114
L++ + T N V ++ + + +R L + + + +L++IE+ER GE+++
Sbjct: 132 LNKHLLNSTNNEGHNVCEIYSLAMVTWRDCL--FRPLNKQVTNAVLKLIEKERNGESINT 189
Query: 115 TLLNHLLKMFTALGI--------------YSESFEKPFLECTSEFYAAEGMKYMQQSDVP 160
L++ ++ + LG+ Y E+FE FL T +Y + + +QQ+ V
Sbjct: 190 RLISGAIQSYLELGVNEDNQFEESPMLTVYKEAFESQFLADTERYYTRKSTELLQQNPVT 249
Query: 161 DYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTE 220
+Y+K VE L EE R +YL S++ L + L+E+H+ L + F L++ +++E
Sbjct: 250 EYMKKVEALLLEERRRARVYLHQSSKGKLARKCRQVLVEKHLEIFLTE-FQNLLNANKSE 308
Query: 221 DLQRMYSLFSRV-NALESLRQALAMYIRRTG 250
DL RMY L R+ N L ++ L +I G
Sbjct: 309 DLGRMYRLIYRIKNGLGEFKKILETHIHNQG 339
>WB|WBGene00000836 [details] [associations]
symbol:cul-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IMP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0043066 GO:GO:0008285
GO:GO:0051301 GO:GO:0016477 GO:GO:0008406 GO:GO:0007067
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974
GO:GO:0008361 GO:GO:0016567 GO:GO:0040015 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0045930
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:LDEGHEN EMBL:U58083 EMBL:Z35639
PIR:T20365 RefSeq:NP_499309.1 UniGene:Cel.6661
ProteinModelPortal:Q17389 SMR:Q17389 STRING:Q17389 PaxDb:Q17389
EnsemblMetazoa:D2045.6 GeneID:176466 KEGG:cel:CELE_D2045.6
UCSC:D2045.6 CTD:176466 WormBase:D2045.6 InParanoid:Q17389
NextBio:892698 Uniprot:Q17389
Length = 780
Score = 646 (232.5 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 169/527 (32%), Positives = 273/527 (51%)
Query: 158 DVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGH 217
+V DY+ VE RL++E +RC LYL+ ST+ PL E L+ + + +L+D
Sbjct: 257 NVTDYMIKVETRLNQEDDRCQLYLNSSTKTPLATCCESVLISNQLDFLQRHFGGLLVDKR 316
Query: 218 RTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHG----IVMDEEKDKDM-VSSLLEFKA 272
+ + N L+ LR++L +I + GH + M+ D + V +LLE
Sbjct: 317 DDDLSRMFKLCDRVPNGLDELRKSLENHIAKEGHQALERVAMEAATDAKLYVKTLLEVHE 376
Query: 273 SLDTIWEQSFSKNEAFCNTIKDAFEYLIN---LRQNRP--------AELIAKFLDEKLRA 321
++ +SF F ++ A IN + + P AEL+A++ D+ LR
Sbjct: 377 RYQSLVNRSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRK 436
Query: 322 GNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKL 381
+K E ELE K++V+F++I KDVF FY K +KRL+ SAS +AE + I+KL
Sbjct: 437 SSKMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKL 496
Query: 382 KTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPP 441
K+ CG ++T +L M D ++SK++ FK+ +A +E +V VL++G WPT+P
Sbjct: 497 KSMCGYEYTARLSKMVNDTQVSKDLTADFKEK-KADMLGQKSVEFNVLVLSSGSWPTFPT 555
Query: 442 MDVRLPHELNVYQDIFKEFYLSKYSGRRLMW--QNSLGHCVLKAEFPKGKKELAVSLFQT 499
+ LP +L+ +IF +FY K++GRRL W S G + FPK K + Q
Sbjct: 556 TPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGE-ITSTAFPK-KYVFTATTAQM 613
Query: 500 VVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV-RVLQKLPKGRDVEDDDSFV 558
++LFN+ + + I AT +++K + SL V + +L K +V +
Sbjct: 614 CTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVS 673
Query: 559 FNEGFTAPLYRIKVNAIQMKETVEENTSTTER-VFQDRQYQVDAAIVRIMKTRKVLSHTL 617
N+ + R+ ++ MK+ +T ++ V +DR+ + A IVRIMKTRK + H
Sbjct: 674 LNKAYMNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQ 733
Query: 618 LITELFQQLKFPIKP-ADLKKR-IESLIDREYLERDKNNPQIYNYLA 662
L+TE+ QL KP ++ KR I SLI++EY+ R + +Y YLA
Sbjct: 734 LMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
Score = 371 (135.7 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 125/435 (28%), Positives = 203/435 (46%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQS-DVPDYLKHVEIRLHEEHERCLLYLDVST 185
L +Y E FE FLE T FY E ++ +V DY+ VE RL++E +RC LYL+ ST
Sbjct: 225 LAVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSST 284
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAM 244
+ PL E L+ + L + F L+ R +DL RM+ L RV N L+ LR++L
Sbjct: 285 KTPLATCCESVLISNQLD-FLQRHFGGLLVDKRDDDLSRMFKLCDRVPNGLDELRKSLEN 343
Query: 245 YIRRTGHG----IVMDEEKDKDM-VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
+I + GH + M+ D + V +LLE ++ +SF F ++ A
Sbjct: 344 HIAKEGHQALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAATSF 403
Query: 300 IN---LRQNRP--AELI--AKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFE 352
IN + + P A+L A+ L + +S+ E L+++ VF+
Sbjct: 404 INNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSSKMPDEAELEELQTKIMV-----VFK 458
Query: 353 AFYKKDLAKRLLLGKSASIDAEKSMISKLKT--ECGSQFTNKLEGM--FK-DIELSKEIN 407
KD+ + K S K +IS+L E + F KL+ M ++ LSK +N
Sbjct: 459 YIDDKDVFSKFYT-KMFS----KRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVN 513
Query: 408 E---SFKQSSQARTKLPS-----GIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKE 459
+ S ++ + K +E +V VL++G WPT+P + LP +L+ +IF +
Sbjct: 514 DTQVSKDLTADFKEKKADMLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQ 573
Query: 460 FYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDA 519
FY K++GRRL W S + + K + Q ++LFN+ + + I A
Sbjct: 574 FYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAA 633
Query: 520 TGIEDKELRRTLQSL 534
T +++K + SL
Sbjct: 634 TKMDEKSAPAIVGSL 648
Score = 99 (39.9 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 27/135 (20%), Positives = 70/135 (51%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQS-PDLVVFLSLVERCWQDLCDQMLMIRGIALYL 59
+G +YQR+E+ + ++ A S DL+ + + E W++ ++ GI YL
Sbjct: 80 VGHEMYQRVEEYVKAYVIAVCEKGAELSGEDLLKYYT-TE--WENFRISSKVMDGIFAYL 136
Query: 60 DRTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDR 114
+R ++++ N+ ++ + L ++++ L +++++ K + +L +I ER G ++
Sbjct: 137 NRHWIRRELDEGHENIYMVYTLALVVWKRNL--FNDLKDKVIDAMLELIRSERTGSMINS 194
Query: 115 TLLNHLLKMFTALGI 129
++ +++ LG+
Sbjct: 195 RYISGVVECLVELGV 209
>FB|FBgn0015509 [details] [associations]
symbol:lin19 "lin-19-like" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 HOGENOM:HOG000021491 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 KO:K03347 EMBL:L41642
EMBL:AF136343 EMBL:BT010290 RefSeq:NP_523655.1 RefSeq:NP_724621.1
RefSeq:NP_724622.1 RefSeq:NP_724623.1 UniGene:Dm.7926
ProteinModelPortal:Q24311 SMR:Q24311 DIP:DIP-19461N IntAct:Q24311
MINT:MINT-989395 STRING:Q24311 PaxDb:Q24311
EnsemblMetazoa:FBtr0088845 EnsemblMetazoa:FBtr0088846
EnsemblMetazoa:FBtr0088847 EnsemblMetazoa:FBtr0088848 GeneID:35742
KEGG:dme:Dmel_CG1877 UCSC:CG1877-RA CTD:35742 FlyBase:FBgn0015509
InParanoid:Q24311 OMA:NECIAES OrthoDB:EOG42280P PhylomeDB:Q24311
GenomeRNAi:35742 NextBio:794991 Bgee:Q24311 GermOnline:CG1877
Uniprot:Q24311
Length = 774
Score = 633 (227.9 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 172/504 (34%), Positives = 260/504 (51%)
Query: 178 LLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LE 236
L YL +T L +T E L+E+H+ I F L++ R +DL+RMYSL + + L
Sbjct: 275 LSYLHETTADVLKSTCEEVLIEKHLK-IFHTEFQNLLNADRNDDLKRMYSLVALSSKNLT 333
Query: 237 SLRQALAMYIRRTGHGIVM-----DEEKD-KDMVSSLLEFKASLDTIWEQSFSKNEAFCN 290
L+ L +I G + D D K V ++L+ + + +F+ + F
Sbjct: 334 DLKSILENHILHQGTEAIAKCCTTDAANDPKTYVQTILDVHKKYNALVLTAFNNDNGFVA 393
Query: 291 TIKDAFEYLINLR-------QNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFR 343
+ A IN ++ EL+AK+ D L+ +K ++ELE L++V+V+F+
Sbjct: 394 ALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNPEDKELEDNLNQVMVVFK 453
Query: 344 FIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELS 403
+I+ KDVF+ +Y K LAKRL+ SAS DAE MISKLK CG ++T KL+ MF+DI +S
Sbjct: 454 YIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIGVS 513
Query: 404 KEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLS 463
K++N FKQ A L I+ + VL++G WP + LP EL F EFY +
Sbjct: 514 KDLNSYFKQYL-AEKNLTMEIDFGIEVLSSGSWPFQLSNNFLLPSELERSVRQFNEFYAA 572
Query: 464 KYSGRRLMW--QNSLGHCVLKAEFPKGKK-ELAVSLFQTVVLMLFNDAQKLSFQDIKDAT 520
++SGR+L W Q G ++ L S FQ VL+ FND + Q ++D T
Sbjct: 573 RHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQLQDNT 632
Query: 521 GIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKET 580
+ + L + LQ L K +VL + + + + RI +N E
Sbjct: 633 QTQQENLIQVLQILL--KAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTEL 690
Query: 581 VEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKR 638
E + + + +DR+ + AAIVRIMK RK L+HT LI+E+ QL KP +KK
Sbjct: 691 KVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKC 750
Query: 639 IESLIDREYLERDKNNPQIYNYLA 662
I+ LI++EYLER + + Y+YLA
Sbjct: 751 IDILIEKEYLERMEGHKDTYSYLA 774
Score = 209 (78.6 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 69/242 (28%), Positives = 115/242 (47%)
Query: 90 EVEHKTVT-GLLRMIERERLGEAVDRTLLNHLLKMFTALG--------------IYSESF 134
+V ++ VT +L+ IE ER G+ ++R+L+ +++ + L +Y ++F
Sbjct: 164 QVLNEPVTKAVLKSIEEERQGKLINRSLVRDVIECYVELSFNEEDTDAEQQKLSVYKQNF 223
Query: 135 EKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERC--------LLYLDVSTR 186
E F+ TS FY E ++ + V +YLKHVE RL EE +R L YL +T
Sbjct: 224 ENKFIADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSKNGLSYLHETTA 283
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAMY 245
L +T E L+E+H+ I F L++ R +DL+RMYSL + + L L+ L +
Sbjct: 284 DVLKSTCEEVLIEKHLK-IFHTEFQNLLNADRNDDLKRMYSLVALSSKNLTDLKSILENH 342
Query: 246 IRRTGHGIVM-----DEEKD-KDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
I G + D D K V ++L+ + + +F+ + F + A
Sbjct: 343 ILHQGTEAIAKCCTTDAANDPKTYVQTILDVHKKYNALVLTAFNNDNGFVAALDKACGKF 402
Query: 300 IN 301
IN
Sbjct: 403 IN 404
Score = 106 (42.4 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 33/138 (23%), Positives = 70/138 (50%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+G LY R+E+ + ++S + S + V+ LS + W+ ++ GI YL+
Sbjct: 74 VGKKLYDRLEQFLKSYLSELLTKFKAISGEEVL-LSRYTKQWKSYQFSSTVLDGICNYLN 132
Query: 61 RTYVKQT-----PNVRSLWDMGLQLFRKYLSSYSEVEHKTVT-GLLRMIERERLGEAVDR 114
R +VK+ + ++ + L ++ +L +V ++ VT +L+ IE ER G+ ++R
Sbjct: 133 RNWVKRECEEGQKGIYKIYRLALVAWKGHLF---QVLNEPVTKAVLKSIEEERQGKLINR 189
Query: 115 TLLNHLLKMFTALGIYSE 132
+L+ +++ + L E
Sbjct: 190 SLVRDVIECYVELSFNEE 207
>UNIPROTKB|F1N829 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:VMLDYVE EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00822359
Ensembl:ENSGALT00000011487 ArrayExpress:F1N829 Uniprot:F1N829
Length = 747
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 176/551 (31%), Positives = 294/551 (53%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L Y E FE PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 200 LKFYQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSY 259
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAMY 245
+I +++++ H+ + + ++ R D+ MY+L V++ L + Q L +
Sbjct: 260 GKVIHECQQRMVADHLQFLHAECHNIIRQEKRN-DMANMYTLLRAVSSGLPHMIQELQNH 318
Query: 246 IRRTG---HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINL 302
I G + E V S+LE + + + ++ F + + A ++N
Sbjct: 319 IHDEGLRATSNLSQENMPTQFVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNY 378
Query: 303 RQNRPA----ELI--AKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYK 356
R+ + EL+ AK+ D L+ KG +E E+E L + +F++I KDVF+ FY
Sbjct: 379 REPKSICKAPELLELAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYA 438
Query: 357 KDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQA 416
+ LAKRL+ G S S+D+E++MI+KLK CG +FT+KL M+ D+ +S ++N F +
Sbjct: 439 RMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKN 498
Query: 417 R-TKLPSGIEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQ 473
+ T + GI ++VL G WP T P +P EL +F+ FY +SGR+L W
Sbjct: 499 QDTIIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWL 558
Query: 474 NSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQS 533
+ L +K + V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++S
Sbjct: 559 HYLCTGEVKMNYLCKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKS 618
Query: 534 LACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQ 593
L V+++ DVE + +F N F++ + K+ K+T +E T V +
Sbjct: 619 LL--DVKMINHDSDKEDVEAESTFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDE 676
Query: 594 DRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERD 651
DR+ + AAIVRIMK RKVL H LI E+ Q + P+ +KK IE LID++Y+ER
Sbjct: 677 DRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERS 736
Query: 652 KNNPQIYNYLA 662
+ + Y+Y+A
Sbjct: 737 QASADEYSYVA 747
Score = 175 (66.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/243 (23%), Positives = 111/243 (45%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------- 125
++ L ++RK + ++ + LLR I+ +R GE ++ +++ ++ F
Sbjct: 141 ELALDMWRKLM--IEPLQAILIRMLLREIKNDRCGEDPNQKVIHGVINSFVHVEQYKKKL 198
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVST 185
L Y E FE PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 199 PLKFYQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCRKYLHPSS 258
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAM 244
+I +++++ H+ + + ++ R D+ MY+L V++ L + Q L
Sbjct: 259 YGKVIHECQQRMVADHLQFLHAECHNIIRQEKRN-DMANMYTLLRAVSSGLPHMIQELQN 317
Query: 245 YIRRTG---HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN 301
+I G + E V S+LE + + + ++ F + + A ++N
Sbjct: 318 HIHDEGLRATSNLSQENMPTQFVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVN 377
Query: 302 LRQ 304
R+
Sbjct: 378 YRE 380
>DICTYBASE|DDB_G0267384 [details] [associations]
symbol:culB "cullin B" species:44689 "Dictyostelium
discoideum" [GO:0031286 "negative regulation of sorocarp stalk cell
differentiation" evidence=IGI;IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0267384 GO:GO:0007275
GenomeReviews:CM000150_GR EMBL:AAFI02000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511 GO:GO:0031286
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q13616 ProtClustDB:CLSZ2429454 EMBL:AF144717
RefSeq:XP_647212.1 ProteinModelPortal:Q9XZJ3 STRING:Q9XZJ3
EnsemblProtists:DDB0191260 GeneID:8616016 KEGG:ddi:DDB_G0267384
OMA:SECINYL Uniprot:Q9XZJ3
Length = 771
Score = 575 (207.5 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 137/429 (31%), Positives = 230/429 (53%)
Query: 129 IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKP 188
+Y +E +LE T +FY E + ++ S + Y+K E R+ EE +R YL+ S+
Sbjct: 193 LYLIEYEASYLENTRQFYTRESVAFIASSGISSYMKKAETRIDEEEQRSQKYLNSSSHDK 252
Query: 189 LIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAMYIR 247
+ L+E+H + + L D + +++ MY L SR+ L + + + YI+
Sbjct: 253 MRRLLHSILIEKHKELLQSECINYLKD-EKLDEIYNMYKLLSRIEGGLAPVLETVQKYIQ 311
Query: 248 RTGHGIV--MDEEKDKD---MVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN- 301
G + + + + D V +LL+ +I ++SF+ + +F + A + N
Sbjct: 312 HVGIDAIKSIPDRNNPDPKIYVETLLKIYLQFSSIIKKSFNNDVSFITVLDLACHKIFNQ 371
Query: 302 --LRQN--RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
+ +N + EL+AK+ D L+ GNK E ELE L +++VLF+++ KDVF+ FY K
Sbjct: 372 NHITRNTTKSPELLAKYCDMLLKKGNKQHEEIELEEKLGQIIVLFKYVDDKDVFQKFYSK 431
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
L++RL+ G S S D EK MI+ LK CG ++T+K + MF DI LS E NE FK + +
Sbjct: 432 MLSRRLINGTSVSDDIEKFMITGLKQACGFEYTSKFQRMFNDITLSAETNEEFK-NHLIK 490
Query: 418 TKLPSG-IEMSVHVLTTGYWPTYPPMDVRL-PHELNVYQDIFKEFYLSKYSGRRLMWQNS 475
L G I+ S+ VLT+G W + + P EL + F+++Y +++ GR+L W +
Sbjct: 491 NSLSIGKIDFSILVLTSGSWSLHSQTSSFIVPQELTLCISAFQQYYSTQHQGRKLNWLHH 550
Query: 476 LGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLA 535
L K+ F K + V+ FQ +L++FN + +S ++I T + + EL RTLQSL
Sbjct: 551 LCKAEAKSFFAKKSYDFQVTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSLI 610
Query: 536 CGKVRVLQK 544
K+ + +K
Sbjct: 611 EAKILISKK 619
Score = 192 (72.6 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 58/263 (22%), Positives = 126/263 (47%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVV-FLSLVERCWQ--DLCDQMLMIRGIAL---- 57
LY+ I+K E+H+ + ++ D + +L + + +LC++++ R + L
Sbjct: 57 LYENIKKFFEQHVDQILLIILDTKSDTISEYLKQWKLFFSGCELCNKVIF-RYLNLNWIN 115
Query: 58 --YLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRT 115
LD+ + P+V + +GL ++++ L + +++ + + + +I+++R GE V
Sbjct: 116 KKILDKKF-GHPPDVYEIQILGLMIWKERL--FFKIKDRVLKCVEILIQKDRDGELVQHQ 172
Query: 116 LLNHLLKMFTALG-------IYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEI 168
++ ++ L +Y +E +LE T +FY E + ++ S + Y+K E
Sbjct: 173 FISQFMESLIKLDSVDKDRTLYLIEYEASYLENTRQFYTRESVAFIASSGISSYMKKAET 232
Query: 169 RLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSL 228
R+ EE +R YL+ S+ + L+E+H + + L D + +++ MY L
Sbjct: 233 RIDEEEQRSQKYLNSSSHDKMRRLLHSILIEKHKELLQSECINYLKD-EKLDEIYNMYKL 291
Query: 229 FSRVNA-LESLRQALAMYIRRTG 250
SR+ L + + + YI+ G
Sbjct: 292 LSRIEGGLAPVLETVQKYIQHVG 314
Score = 163 (62.4 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 36/108 (33%), Positives = 61/108 (56%)
Query: 557 FVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHT 616
+ N ++ ++KV++ KET +N T + + +DR+ + A+IVRIMK RK ++H
Sbjct: 664 YTVNSAYSNKRSKVKVSSSLQKETPLQNEETYKGIDEDRKLYLQASIVRIMKARKTMNHV 723
Query: 617 LLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYLA 662
LI E+ + + +P +KK IE LI++EY+ R + Y Y A
Sbjct: 724 SLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITRAEGESDRYLYAA 771
Score = 39 (18.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 554 DDSFVFNEGFTAPLYRIKVNAIQMKETVEE 583
DD VF + ++ L R +N + + +E+
Sbjct: 420 DDKDVFQKFYSKMLSRRLINGTSVSDDIEK 449
Score = 37 (18.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 245 YIRRTGHGIVMDEEKDKDMVSSLLEFKAS 273
+I + ++ + DKD L+E++AS
Sbjct: 173 FISQFMESLIKLDSVDKDRTLYLIEYEAS 201
>UNIPROTKB|F1SR61 [details] [associations]
symbol:LOC100511787 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0005634 GO:GO:0005794 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0007229 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0007369 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:ATFYGPI
GO:GO:0017145 GO:GO:0001831 EMBL:AEMK01142839 EMBL:CU640472
EMBL:CU915646 Ensembl:ENSSSCT00000017677 Uniprot:F1SR61
Length = 550
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 148/347 (42%), Positives = 222/347 (63%)
Query: 149 EGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILD- 207
E K++ ++ Y+K VE R++EE ER + LD ST +P++ ER+L+ +H+ I++
Sbjct: 2 ESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEM 61
Query: 208 --KGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDK--- 261
G ++ +TEDL MY LFSRV N L+++ + ++ Y+R G +V +E + K
Sbjct: 62 ENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPV 121
Query: 262 DMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQNRPAELIAKFLDEKLRA 321
D + LL+ K+ D ++SF+ + F TI FEY +NL P E ++ F+D+KL+
Sbjct: 122 DYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSP-EYLSLFIDDKLKK 180
Query: 322 GNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKL 381
G KG +E+E+E LDK +VLFRF+Q KDVFE +YK+ LA+RLL KS S D+EK+MISKL
Sbjct: 181 GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKL 240
Query: 382 KTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTY-- 439
KTECG QFT+KLEGMF+D+ +S + F+Q QA G++++V VLTTGYWPT
Sbjct: 241 KTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSA 300
Query: 440 -PPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEF 485
P ++ P + ++ IF+ FYL+K+SGR+L Q+ +G L A F
Sbjct: 301 TPKCNIP-PAPRHAFE-IFRRFYLAKHSGRQLTLQHHMGSADLNATF 345
Score = 389 (142.0 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 93/259 (35%), Positives = 146/259 (56%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 298 QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPVKKEDGSE 356
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 357 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 411
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++++ F N+ FT+ L+R+K+ + K E+ E
Sbjct: 412 ALQSLACGKPTQRVLTKEPKSKEIKNGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 471
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 472 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 531
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 532 EREYLARTPEDRKVYTYVA 550
>UNIPROTKB|D4A0H4 [details] [associations]
symbol:Cul2 "Cullin 2 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031462 "Cul2-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 RGD:1310644 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K03870 CTD:8453 EMBL:CH474030 IPI:IPI00947898
RefSeq:NP_001101887.1 UniGene:Rn.2970 Ensembl:ENSRNOT00000066805
GeneID:361258 KEGG:rno:361258 NextBio:675723 Uniprot:D4A0H4
Length = 725
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 180/604 (29%), Positives = 323/604 (53%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------- 125
++ L ++RK + +++ + LLR I+ +R GE ++ +++ ++ F
Sbjct: 141 ELALDMWRKLM--VEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKF 198
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVST 185
L Y F PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 199 PLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSS 258
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAM 244
+I +++++ H+ + + +++ R D+ MY L V++ L + + L
Sbjct: 259 YTKVIHECQQRMVADHLQFLHSECHSIIRH-ERKNDMANMYVLLRAVSSGLPHMIEELQR 317
Query: 245 YIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQ 304
+I G+ ++ + +L ++++ E K NT+ + ++ ++
Sbjct: 318 HIH--DEGLRATSNLTQEHMPTLF-----VESVLEVH-GKFVQLINTVLNGDQHFMSA-- 367
Query: 305 NRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLL 364
+ +AK+ D L+ KG +E E+E L + +F++I KDVF+ FY + LAKRL+
Sbjct: 368 ---LDKLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLI 424
Query: 365 LGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR-TKLPSG 423
G S S+D+E++MI+KLK CG +FT+KL M+ D+ +S ++N F + + T + G
Sbjct: 425 HGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTVIDLG 484
Query: 424 IEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVL 481
I ++VL G WP T P +P EL +F+ FY +SGR+L W + L +
Sbjct: 485 ISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEV 544
Query: 482 KAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVR 540
K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++SL V+
Sbjct: 545 KMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLL--DVK 601
Query: 541 VLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVD 600
++ + D++ + SF N F++ + K+ K+T +E T V +DR+ +
Sbjct: 602 MINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMYLQ 661
Query: 601 AAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIY 658
AAIVRIMK RKVL H LI E+ Q + P+ +KK IE LID++Y+ER + + Y
Sbjct: 662 AAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEY 721
Query: 659 NYLA 662
+Y+A
Sbjct: 722 SYVA 725
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 198/649 (30%), Positives = 331/649 (51%)
Query: 37 LVERCWQDLCDQMLMIRGIA---LYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEH 93
LV+R W + +++R ++ YLDR YV + + +L D+G F + Y E++
Sbjct: 103 LVKR-W---ANHKILVRWLSRFCFYLDRFYVARR-GLPTLNDVGFTSFHDLV--YQEIQS 155
Query: 94 KTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-----IYSESFEKPFLECTSEFYAA 148
+ LL +I +ER GE +DRTL+ +++ ++ G IY E FE L+ T+ +Y+
Sbjct: 156 EAKDVLLALIHKEREGEQIDRTLVKNVIDVYCGNGVGQMVIYEEDFESFLLQDTASYYSR 215
Query: 149 EGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDK 208
+ ++ Q+ PDY+ E L E ER YL +T L+ + +LL +++
Sbjct: 216 KASRWSQEDSCPDYMLKAEECLKLEKERVTNYLHSTTEPKLVEKVQNELLVVVAKQLIEN 275
Query: 209 ---GFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKDMV 264
G L+ + DL RMY L+ + LE + ++ G+ ++ ++ D
Sbjct: 276 EHSGCLALLRDDKMGDLSRMYRLYRLIPQGLEPIADLFKQHVTAEGNALI---KQAADAA 332
Query: 265 SSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNK 324
++ + AS + + ++ + + + F+ +L E F ++ + AG
Sbjct: 333 TNQ-DASAS-QVLVRKEIELHDKYMVYVDECFQKH-SLFHKLLKEAFEVFCNKTV-AG-- 386
Query: 325 GTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASI---DAEKSMISKL 381
+S E L D +L + G + D A + L K ++ ++K + ++
Sbjct: 387 ASSAEILATYCDNIL---KTRGGSEKLS-----DEATEITLEKVVNLLVYISDKDLFAEF 438
Query: 382 -KTECGSQFTNKLEGMFK---DIELSKEINESFKQ--SSQARTKLPSGIEMSVHVLTTGY 435
+ + + G+ K DI L++E+ +F S+ TKL GI+ +V VLTTG+
Sbjct: 439 YRKKQARRLLFDRSGIMKEVTDITLARELQTNFVDYLSANMTTKL--GIDFTVTVLTTGF 496
Query: 436 WPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVS 495
WP+Y D+ LP E+ + FK FY +K + RRL W SLG C + +F K EL VS
Sbjct: 497 WPSYKTTDLNLPTEMVNCVEAFKVFYGTKTNSRRLSWIYSLGTCHILGKFEKKTMELVVS 556
Query: 496 LFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDD 555
+Q VL+LFN+A++LS+ +I + + ++L R L SL+C K ++L K P R + D
Sbjct: 557 TYQAAVLLLFNNAERLSYTEISEQLNLSHEDLVRLLHSLSCLKYKILIKEPMSRTISKTD 616
Query: 556 SFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
+F FN FT + +I+V M +E E V +DR+Y +DAA+VRIMK+RKVL+H
Sbjct: 617 TFEFNSKFTDKMRKIRVPLPPM----DERKKVVEDVDKDRRYAIDAALVRIMKSRKVLAH 672
Query: 616 TLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYLA 662
L++E + L KP +KKRIE LI+R+YLERD N + Y+A
Sbjct: 673 QQLVSECVEHLSKMFKPDIKMIKKRIEDLINRDYLERDTENANTFKYVA 721
>UNIPROTKB|F1RUR7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SECINYL EMBL:CU914378
Ensembl:ENSSSCT00000012151 Uniprot:F1RUR7
Length = 510
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 161/508 (31%), Positives = 274/508 (53%)
Query: 169 RLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSL 228
RL +E RC YL S+ +I +++++ H+ + + ++ + D+ MY L
Sbjct: 7 RLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHLQFLHAECHNIIRQ-EKKNDMANMYVL 65
Query: 229 FSRVNA-LESLRQALAMYIRRTG---HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSK 284
V+ L + Q L +I G + E V S+LE + +
Sbjct: 66 LRAVSTGLPHMIQELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNG 125
Query: 285 NEAFCNTIKDAFEYLINLRQNRPA----ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLV 340
++ F + + A ++N R+ + EL+AK+ D L+ KG +E E+E L +
Sbjct: 126 DQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFIT 185
Query: 341 LFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDI 400
+F++I KDVF+ FY + LAKRL+ G S S+D+E++MI+KLK CG +FT+KL M+ D+
Sbjct: 186 VFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDM 245
Query: 401 ELSKEINESFKQSSQAR-TKLPSGIEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIF 457
+S ++N F + + T + GI ++VL G WP T P +P EL +F
Sbjct: 246 SVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMF 305
Query: 458 KEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDI 516
+ FY +SGR+L W + L +K + GK +A V+ +Q VL+ FN+++ +S++++
Sbjct: 306 ELFYSQHFSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKEL 364
Query: 517 KDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQ 576
+D+T + +KEL +T++SL V+++ + D++ + SF N F++ + K+
Sbjct: 365 QDSTQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSM 422
Query: 577 MKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD-- 634
K+T +E T V +DR+ + AAIVRIMK RKVL H LI E+ Q + P+
Sbjct: 423 QKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISM 482
Query: 635 LKKRIESLIDREYLERDKNNPQIYNYLA 662
+KK IE LID++Y+ER + + Y+Y+A
Sbjct: 483 IKKCIEVLIDKQYIERSQASADEYSYVA 510
>WB|WBGene00000841 [details] [associations]
symbol:cul-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006974 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 EMBL:Z77666
PIR:T23474 RefSeq:NP_502412.1 ProteinModelPortal:Q21346 SMR:Q21346
STRING:Q21346 EnsemblMetazoa:K08E7.7 GeneID:178214
KEGG:cel:CELE_K08E7.7 UCSC:K08E7.7 CTD:178214 WormBase:K08E7.7
InParanoid:Q21346 NextBio:900194 Uniprot:Q21346
Length = 729
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 206/691 (29%), Positives = 327/691 (47%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQ-SPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTY 63
LY+++E ++ AIR + S D ++ +E W + + I YL+R +
Sbjct: 59 LYKQLENYIRTYV-IAIRDRISACSGDELLGKCTIE--WDNFKFSTRICNCIFQYLNRNF 115
Query: 64 VKQ-----TPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLN 118
V + + ++ + L +++ + + KT+ +L +I ER G ++ T ++
Sbjct: 116 VSKKVEDKNGEIVEIYKLALDIWKAEF--FDNFKVKTIDAILELILLERCGSTINSTHIS 173
Query: 119 HLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCL 178
+++ T L IY SFE FL+ T FY E + + V +Y+ VE RL +E R
Sbjct: 174 SVVECLTELDIYKVSFEPQFLDATKLFYKQEVLN--SKETVIEYMITVENRLFQEEYRSR 231
Query: 179 LYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALES 237
YL ST LI + E L+ + L F L++ + E L RMYSL RV + LE
Sbjct: 232 RYLGPSTNDLLIDSCESILISDRLK-FLHSEFERLLEARKDEHLTRMYSLCRRVTHGLED 290
Query: 238 LRQALAMYIRRTGHGIVMDEEKD-------KDMVSSLLEFKASLDTIWEQSFSKNEAFCN 290
LR L I + GH + KD K+ ++ LLE + ++F +N F
Sbjct: 291 LRVYLEKRILKEGHETLQRLAKDSGLKTTPKEYITKLLEVHEIYFNLINKAFDRNALFMQ 350
Query: 291 TI----KDAFEY-LINL------RQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVL 339
++ KD E + + R R A+ +A++ D+ L+ +K E LDK L
Sbjct: 351 SLDKASKDFIEANAVTMLAPEKHRSTRSADYLARYCDQLLKKNSKVQDET----ALDKAL 406
Query: 340 VLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKD 399
+ ++I KDVF+ +Y+ ++R++ SAS DAE+ I+ L G ++T L M +D
Sbjct: 407 TVLKYISEKDVFQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGLEYTRNLVKMVED 466
Query: 400 IELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKE 459
++SK++ FK K I+ +V + TTG WP+ + + LP EL+ F
Sbjct: 467 AKISKDLTTEFKD-----IKTEKSIDFNVILQTTGAWPSLDQIKIILPRELSTILKEFDT 521
Query: 460 FYLSKYSGRRLMWQNSL--GHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIK 517
FY + ++GRRL W S G KA F K K V+ Q L LFN+ + + I
Sbjct: 522 FYNASHNGRRLNWAYSQCRGEVNSKA-FEK-KYVFIVTASQLCTLYLFNEQDSFTIEQIS 579
Query: 518 DATGIEDKELRRTLQSL--ACGKVRVLQKLPKGRDVEDDDSFV-FNEGFTAPLYRIKVNA 574
A + K + SL V V+ K +D D+ V N + R+ +
Sbjct: 580 KAIEMTAKSTSAIVGSLNPVIDPVLVVDK-GNEKDGYPPDAVVSLNTKYANKKVRVDLTT 638
Query: 575 IQMKETVEENTSTTERVFQ-DRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP- 632
K T + T + + DR+Y++ A IVRIMKTRK L+HTLLI E+ QLK P
Sbjct: 639 AIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPN 698
Query: 633 -ADLKKRIESLIDREYLERDKNNPQIYNYLA 662
+K IE LI++ Y+ R +N +Y YLA
Sbjct: 699 VQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
>UNIPROTKB|G4N0J9 [details] [associations]
symbol:MGG_07731 "Cullin-3" species:242507 "Magnaporthe
oryzae 70-15" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CM001233
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
RefSeq:XP_003712937.1 ProteinModelPortal:G4N0J9
EnsemblFungi:MGG_07731T0 GeneID:2683658 KEGG:mgr:MGG_07731
Uniprot:G4N0J9
Length = 830
Score = 313 (115.2 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 60/177 (33%), Positives = 112/177 (63%)
Query: 264 VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGN 323
V +L+ +A D IWE+SF+++ T+ F I+ + R +E ++ ++DE L+ G
Sbjct: 398 VHDVLDLRAKFDVIWEKSFAQDPGLQTTMTKGFSDFIH-QFGRSSEFVSLYIDENLKRGI 456
Query: 324 KGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKT 383
+G S+ E+ LD+ +V+ R+++ KD+FE +Y+K L +RLL +++S +AEK +I+ ++
Sbjct: 457 RGKSDLEVTAILDRSIVMIRYLKDKDLFERYYQKHLGRRLLHSRASSEEAEKQLITMMQL 516
Query: 384 ECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLP---SGIEMSVHVLTTGYWP 437
E G FT+K EGMFKDI +S+E++ + + ++ + I++++ VLT+ WP
Sbjct: 517 ELGKHFTSKFEGMFKDITISEELSTKYGEHIRSLGDVDVHHKPIDLAISVLTSNSWP 573
Score = 302 (111.4 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 79/181 (43%), Positives = 105/181 (58%)
Query: 491 ELAVSLFQTVVLMLFN---DAQKLSFQDIKDATGIEDKELRRTLQSLACG-KVRVLQKLP 546
EL VS + VVLMLFN D + LSF+DI+ T I K+L R L SL+ K RVL K P
Sbjct: 652 ELNVSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSRALASLSINPKARVLLKDP 711
Query: 547 KGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVE---ENTSTTERVFQDRQYQVDAAI 603
+ + D F FN GF + +IK I + VE E T ++ + R++ +DAAI
Sbjct: 712 ATKTIRPGDKFSFNAGFVSKAIKIKAPVINSQSKVEGDEERQRTEDKNDETRRHMIDAAI 771
Query: 604 VRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYL 661
VRIMK+RK L+H L+ E+ QL +P A +K RIE LI REYLER ++ Y Y+
Sbjct: 772 VRIMKSRKELAHNALLAEVIGQLVSRFQPDVAMIKTRIEDLIAREYLERLDDSG--YKYM 829
Query: 662 A 662
A
Sbjct: 830 A 830
Score = 236 (88.1 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 77/225 (34%), Positives = 103/225 (45%)
Query: 387 SQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTY------- 439
S+F + + ELS + E + I++++ VLT+ WP
Sbjct: 524 SKFEGMFKDITISEELSTKYGEHIRSLGDVDVH-HKPIDLAISVLTSNSWPPDVMGRPAQ 582
Query: 440 ------PP-MDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFP--KG-- 488
PP +D P E+ QD F +FYL SGR L W S G +K FP KG
Sbjct: 583 VGRGDGPPAVDCNYPPEIKRLQDSFFKFYLKDRSGRVLTWIGSAGSADIKCVFPPVKGMS 642
Query: 489 -------KKELAVSLFQTVVLMLFN---DAQKLSFQDIKDATGIEDKELRRTLQSLACG- 537
+ EL VS + VVLMLFN D + LSF+DI+ T I K+L R L SL+
Sbjct: 643 GPLSRERRYELNVSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSRALASLSINP 702
Query: 538 KVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVE 582
K RVL K P + + D F FN GF + +IK I + VE
Sbjct: 703 KARVLLKDPATKTIRPGDKFSFNAGFVSKAIKIKAPVINSQSKVE 747
Score = 168 (64.2 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 43/155 (27%), Positives = 77/155 (49%)
Query: 97 TGLLRMIERERLGEAVDRTLLNHLLKMFTAL----------GIYSESFEKPFLECTSEFY 146
T +L I+ ER G+ ++R+L++ +KM L +Y FE LE + FY
Sbjct: 184 TVILDHIDMEREGDVINRSLIHSCVKMLEDLYETDEEMDADRLYLVRFEPHLLEASRTFY 243
Query: 147 AAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHIS--- 203
+E +K ++ D +++ RL EE +RC L + + + E +L+ H++
Sbjct: 244 RSEALKLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTLSIEKMTRAVEAELISAHLNDFL 303
Query: 204 AILDKGFTMLMDGHRTEDLQRMYSLFSRVNALESL 238
A+ + G ++D R EDL +Y L +RV+ + L
Sbjct: 304 ALENNGLRQMLDDDRVEDLAILYQLVARVDPSKDL 338
Score = 97 (39.2 bits), Expect = 8.0e-57, Sum P(3) = 8.0e-57
Identities = 44/185 (23%), Positives = 86/185 (46%)
Query: 34 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYL-SSYSEVE 92
F+ ++ W++ M M+ I +YLD+ ++K++ S++ + LFR +L + + V
Sbjct: 113 FMKGLKEAWENHRMSMNMVADILMYLDKGFLKESRGT-SIFVTTIGLFRDHLVNPNTVVG 171
Query: 93 H-KTV-------TGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTS- 143
H +T T +L I+ ER G+ ++R+L++ +KM L E + L
Sbjct: 172 HDRTFSLFDILSTVILDHIDMEREGDVINRSLIHSCVKMLEDLYETDEEMDADRLYLVRF 231
Query: 144 EFYAAEGMKYMQQSDVPDYLKH--VEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERH 201
E + E + +S+ L++ I + + H R L D K ++T + + R
Sbjct: 232 EPHLLEASRTFYRSEALKLLRNGDASIWIRQTHRRLLEEEDRC--KTTLSTLSIEKMTRA 289
Query: 202 ISAIL 206
+ A L
Sbjct: 290 VEAEL 294
Score = 58 (25.5 bits), Expect = 1.1e-30, Sum P(4) = 1.1e-30
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 308 AELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLL-LG 366
AELI+ L++ L N G + + ++ + +L++ + D + KK + R+L LG
Sbjct: 292 AELISAHLNDFLALENNGLRQMLDDDRVEDLAILYQLVARVDPSKDLLKKGVLNRILALG 351
Query: 367 KSASIDAEKSMI 378
A I+ S I
Sbjct: 352 --AEIEKNLSTI 361
Score = 50 (22.7 bits), Expect = 6.5e-52, Sum P(3) = 6.5e-52
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 229 FSRVNALESLRQALA-MYIRRTGHGIVMDEEKDKDMVSSL 267
F R AL+ LR A ++IR+T ++ +E++ K +S+L
Sbjct: 242 FYRSEALKLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTL 281
Score = 46 (21.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 25/87 (28%), Positives = 37/87 (42%)
Query: 348 KDVFEAFYKKDLAKRLL--LGKSASIDAE------KSMISKLKTECGSQFTNKLEGM--- 396
+D F FY KD + R+L +G + S D + K M L E + GM
Sbjct: 604 QDSFFKFYLKDRSGRVLTWIGSAGSADIKCVFPPVKGMSGPLSRERRYELNVSTYGMVVL 663
Query: 397 --FKDIELSKEINESFKQSSQARTKLP 421
F +E + + SF + QA T +P
Sbjct: 664 MLFNSLEDGETL--SF-EDIQAETSIP 687
Score = 44 (20.5 bits), Expect = 4.7e-36, Sum P(3) = 4.7e-36
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 454 QDIFKEFYLSKYSGRRLM 471
+D+F+ +Y K+ GRRL+
Sbjct: 481 KDLFERYY-QKHLGRRLL 497
>UNIPROTKB|Q5T2B5 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713
HOVERGEN:HBG106177 EMBL:AL392046 UniGene:Hs.82919 HGNC:HGNC:2552
ChiTaRS:CUL2 IPI:IPI00642151 SMR:Q5T2B5 Ensembl:ENST00000374742
Ensembl:ENST00000374746 Uniprot:Q5T2B5
Length = 706
Score = 595 (214.5 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 152/527 (28%), Positives = 273/527 (51%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------- 125
++ L ++RK + ++ + LLR I+ +R GE ++ +++ ++ F
Sbjct: 141 ELALDMWRKLM--VEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKF 198
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVST 185
L Y E FE PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 199 PLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSS 258
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAM 244
+I +++++ H+ + + ++ + D+ MY L V+ L + Q L
Sbjct: 259 YTKVIHECQQRMVADHLQFLHAECHNIIRQ-EKKNDMANMYVLLRAVSTGLPHMIQELQN 317
Query: 245 YIRRTG---HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN 301
+I G + E V S+LE + + ++ F + + A ++N
Sbjct: 318 HIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN 377
Query: 302 LRQNRPA----ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
R+ + EL+AK+ D L+ KG +E E+E L + +F++I KDVF+ FY +
Sbjct: 378 YREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYAR 437
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
LAKRL+ G S S+D+E++MI+KLK CG +FT+KL M+ D+ +S ++N F + +
Sbjct: 438 MLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQ 497
Query: 418 -TKLPSGIEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQN 474
T + GI ++VL G WP T P +P EL +F+ FY +SGR+L W +
Sbjct: 498 DTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLH 557
Query: 475 SLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQS 533
L +K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++S
Sbjct: 558 YLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKS 616
Query: 534 LACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKET 580
L V+++ + D++ + SF N F++ + K+ K+T
Sbjct: 617 LL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDT 661
Score = 69 (29.3 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 635 LKKRIESLIDREYLERDKNNPQIYNYLA 662
+KK IE LID++Y+ER + + Y+Y+A
Sbjct: 679 IKKCIEVLIDKQYIERSQASADEYSYVA 706
>RGD|1310644 [details] [associations]
symbol:Cul2 "cullin 2" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030163 "protein catabolic process" evidence=ISO] [GO:0030891
"VCB complex" evidence=IDA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 RGD:1310644
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0030891
IPI:IPI00559025 PRIDE:D4AEE5 Ensembl:ENSRNOT00000021462
UCSC:RGD:1310644 ArrayExpress:D4AEE5 Uniprot:D4AEE5
Length = 706
Score = 588 (212.0 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 150/527 (28%), Positives = 274/527 (51%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------- 125
++ L ++RK + +++ + LLR I+ +R GE ++ +++ ++ F
Sbjct: 141 ELALDMWRKLM--VEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKF 198
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVST 185
L Y F PFL T E+Y E +Q+S+ Y++ V RL +E RC YL S+
Sbjct: 199 PLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSS 258
Query: 186 RKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAM 244
+I +++++ H+ + + +++ R D+ MY L V++ L + + L
Sbjct: 259 YTKVIHECQQRMVADHLQFLHSECHSIIRH-ERKNDMANMYVLLRAVSSGLPHMIEELQR 317
Query: 245 YIRRTG---HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN 301
+I G + E V S+LE + + ++ F + + A ++N
Sbjct: 318 HIHDEGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN 377
Query: 302 LRQNRPA----ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK 357
R+ + EL+AK+ D L+ KG +E E+E L + +F++I KDVF+ FY +
Sbjct: 378 YREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYAR 437
Query: 358 DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR 417
LAKRL+ G S S+D+E++MI+KLK CG +FT+KL M+ D+ +S ++N F + +
Sbjct: 438 MLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQ 497
Query: 418 -TKLPSGIEMSVHVLTTGYWP-TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQN 474
T + GI ++VL G WP T P +P EL +F+ FY +SGR+L W +
Sbjct: 498 DTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLH 557
Query: 475 SLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQS 533
L +K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++S
Sbjct: 558 YLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKS 616
Query: 534 LACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKET 580
L V+++ + D++ + SF N F++ + K+ K+T
Sbjct: 617 LL--DVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDT 661
Score = 69 (29.3 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 635 LKKRIESLIDREYLERDKNNPQIYNYLA 662
+KK IE LID++Y+ER + + Y+Y+A
Sbjct: 679 IKKCIEVLIDKQYIERSQASADEYSYVA 706
>FB|FBgn0032956 [details] [associations]
symbol:Cul-2 "Cullin-2" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0007295 "growth of a germarium-derived egg chamber"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:AE014134 GO:GO:0022008
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0008582 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:35420 KO:K03870 OMA:VMLDYVE EMBL:AY061434
RefSeq:NP_610117.1 RefSeq:NP_724352.1 UniGene:Dm.6467 SMR:Q9V9R2
IntAct:Q9V9R2 MINT:MINT-904022 STRING:Q9V9R2
EnsemblMetazoa:FBtr0085899 EnsemblMetazoa:FBtr0085900 GeneID:35420
KEGG:dme:Dmel_CG1512 UCSC:CG1512-RA FlyBase:FBgn0032956
InParanoid:Q9V9R2 OrthoDB:EOG4HDR8R GenomeRNAi:35420 NextBio:793437
Uniprot:Q9V9R2
Length = 753
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 165/552 (29%), Positives = 275/552 (49%)
Query: 126 ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHE-EHERCLLYLDVS 184
+L +Y E FE P LE + +Y E K + + V +Y++ V IR+ E E R +L VS
Sbjct: 211 SLKLYQELFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEV-IRILEYESRRAQKFLHVS 269
Query: 185 TRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV--NALESLRQAL 242
+ L E + + + I + M+ + R +DL+ MY + + N L
Sbjct: 270 SLPKLRKECEEKFINDRLGFIYSECREMVSE-ERRQDLRNMYVVLKPIPDNLKSELITTF 328
Query: 243 AMYIRRTGHGIVM---DEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYL 299
+I+ G V E V ++L+ + F + F + + A +
Sbjct: 329 LDHIKSEGLQTVSALKGENIHIAFVENMLKVHHKYQELIADVFENDSLFLSALDKACASV 388
Query: 300 INLRQN-----RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAF 354
IN R R AE +AK+ D L+ T E E++ L + +F++I+ KDV++ F
Sbjct: 389 INRRPTERQPCRSAEYVAKYCDTLLKKSK--TCEAEIDQKLTNNITIFKYIEDKDVYQKF 446
Query: 355 YKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSS 414
Y + LAKRL+ +S S+DAE+ MI++LK CG +FTNKL MF DI +S ++N F
Sbjct: 447 YSRLLAKRLIHEQSQSMDAEEGMINRLKQACGYEFTNKLHRMFTDISVSVDLNNKFNTHL 506
Query: 415 QARTKLPSGIEMSVHVLTTGYWP--TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMW 472
+ + + GI +++ VL G WP + + +P E +F+++Y +SGR+L W
Sbjct: 507 KD-SNVDLGINLAIKVLQAGAWPLGSTQVIPFAVPQEFEKSIKMFEDYYHKLFSGRKLTW 565
Query: 473 QNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQ 532
+ + H LK K + + +Q +++LF LS ++I++ + D+ ++ +Q
Sbjct: 566 LHHMCHGELKLSHLKKSYIVTMQTYQMAIILLFETCDSLSCREIQNTLQLNDETFQKHMQ 625
Query: 533 SLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVF 592
+ K+ L ++ + N +T + K+++ KET +E T V
Sbjct: 626 PIIESKL--LNA--SSENLAGETRIELNLDYTNKRTKFKISSALQKETPQEVEHTINSVD 681
Query: 593 QDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLIDREYLER 650
+DR+ + AAIVRIMK RKVL H LI E+ K P A +KK +ESLID++Y+ER
Sbjct: 682 EDRKLFLQAAIVRIMKARKVLKHNALIQEVLSLSKVSFTPNIAMIKKCVESLIDKQYIER 741
Query: 651 DKNNPQIYNYLA 662
N+ Y+Y+A
Sbjct: 742 TANSGDEYSYMA 753
Score = 132 (51.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 60/254 (23%), Positives = 104/254 (40%)
Query: 75 DMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEA-VDR---TLLNHLLKMFT----- 125
++GL ++R Y+ Y E V +L I +R +D ++N ++ F
Sbjct: 149 ELGLDIWRLYMIEYLSSE--LVRHILEGIAADRASNGTLDHHRVQIINGVIHSFVEVQDY 206
Query: 126 ----ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHE-EHERCLLY 180
+L +Y E FE P LE + +Y E K + + V +Y++ V IR+ E E R +
Sbjct: 207 KKTGSLKLYQELFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEV-IRILEYESRRAQKF 265
Query: 181 LDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV--NALESL 238
L VS+ L E + + + I + M+ + R +DL+ MY + + N L
Sbjct: 266 LHVSSLPKLRKECEEKFINDRLGFIYSECREMVSE-ERRQDLRNMYVVLKPIPDNLKSEL 324
Query: 239 RQALAMYIRRTGHGIVM---DEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDA 295
+I+ G V E V ++L+ + F + F + + A
Sbjct: 325 ITTFLDHIKSEGLQTVSALKGENIHIAFVENMLKVHHKYQELIADVFENDSLFLSALDKA 384
Query: 296 FEYLINLRQNRPAE 309
+IN RP E
Sbjct: 385 CASVIN---RRPTE 395
>DICTYBASE|DDB_G0278991 [details] [associations]
symbol:culE "cullin E" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0278991 GenomeReviews:CM000152_GR EMBL:AAFI02000026
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q9JLV5 RefSeq:XP_641893.1
ProteinModelPortal:Q54XF7 PRIDE:Q54XF7 EnsemblProtists:DDB0266744
GeneID:8621819 KEGG:ddi:DDB_G0278991 OMA:AETLMIN Uniprot:Q54XF7
Length = 750
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 170/567 (29%), Positives = 290/567 (51%)
Query: 127 LGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
L IY FE+ FL+ T FY AE +++++ V +Y++HV R+ +E R Y+ +ST
Sbjct: 190 LEIYQSCFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYMPISTL 249
Query: 187 KPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYI 246
+ L L+ + K +L++ ++ DL MYSL SRVN L L+ + +I
Sbjct: 250 EKLTKILNNVLISNYKEQFASKFLDILIED-KSSDLVMMYSLLSRVNHLTPLKNIFSDFI 308
Query: 247 RRTG-----HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN 301
+ G + +EK + ++S LL+ + + + ++ + + F + +F L+N
Sbjct: 309 KSEGLKEIESNLKEAQEKPQVLISILLKIYSRFNIMIKECYGNDTDFTTAMDKSFSILVN 368
Query: 302 ---------LRQNRPAELIAKFLDEKLRAGNKGTSEE-ELEGTLDKVLVLFRFIQGKDVF 351
+++ +++KF D+ LR G S+E ELE L + + LF+++ KD+F
Sbjct: 369 ENPASYDPKKKESNIPVVLSKFCDQILRKGPHHISDEAELEKKLTEAVCLFKYLPDKDIF 428
Query: 352 EAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFK 411
Y+K L+KRL+ SAS DAE MI+KLK G + KL M D+ L K+IN +F+
Sbjct: 429 MLNYQKMLSKRLVEDLSASEDAETLMINKLKNYQGFDYCTKLTRMITDMRLCKDININFQ 488
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWP-----TYPPMDVRLPHELNVYQDIFKEFYLSKYS 466
++ L + + +VLT G W T P + P E+ F+ FY Y
Sbjct: 489 NHLNEKS-LTLPYQFNFYVLTNGSWTLTNKQTATPF--KPPSEMLSSITYFESFYKKSYQ 545
Query: 467 GRRLMWQNSLGHCVLKAEFPKGK-KELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDK 525
GR L + + + KGK +L + +Q +L++FN A K++ I D G+++
Sbjct: 546 GRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKITRFLINDTIGLDET 605
Query: 526 ELRRTLQSLACGKVRVLQ-KLPKGRDVEDDDSFVFNEGFTAPLYRIKVN-AIQMKETVE- 582
+R L LA K +++ P ++ +D F N F++ ++ N A+Q+ ET +
Sbjct: 606 SIRLPL--LALIKTGIIECSEPSFKNWNNDTEFTVNSKFSSKKMKVSCNIAVQIGETKQS 663
Query: 583 --ENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKR 638
+ T + + + ++R +++ AAIVRIMK++K ++H L E Q+ F K +KK
Sbjct: 664 EGQQTVSEQEIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTTQVSKWFTPKITAIKKA 723
Query: 639 IESLIDREYLERDKN-NPQI--YNYLA 662
IE LID+EY+ R + NP Y Y+A
Sbjct: 724 IEYLIDQEYIRRTTDDNPSARKYEYMA 750
>CGD|CAL0000107 [details] [associations]
symbol:CDC53 species:5476 "Candida albicans" [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISA;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] [GO:0006521 "regulation of cellular
amino acid metabolic process" evidence=IMP] [GO:0010570 "regulation
of filamentous growth" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070783 "growth of unicellular organism
as a thread of attached cells" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0003688 "DNA replication
origin binding" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 404 (147.3 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 130/422 (30%), Positives = 220/422 (52%)
Query: 261 KDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN---LRQNRPA------ELI 311
K V +L+ + I ++FSK+ F ++ +A + +N + +P EL+
Sbjct: 357 KVYVHTLISIYNRFNDIVVRAFSKDTKFIKSLDNACRHFVNNNPIATPKPRSPCRTPELL 416
Query: 312 AKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASI 371
A++ D L++ +K + E+ D ++++F+FI +D FE Y++ LAKRL+ G S S
Sbjct: 417 ARYADGFLKSNSK---DNEMNA--DNLMIVFKFIAERDSFEEHYRRLLAKRLVNGTSKSE 471
Query: 372 DAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVL 431
+ E+S+I +L+ E ++T+K+ MF DI+ S ++ FK + S VL
Sbjct: 472 EMEESVIHRLQEENSIEYTSKMTKMFTDIKASDDLKIKFKDGMNVL------FDFSPMVL 525
Query: 432 TTGYWPTYPPMD---VRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKG 488
WP + D ++L EL V D FK YL + G+++ W + G LKA KG
Sbjct: 526 ARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYLQQGKGKQIEWLWNHGRAELKAHLTKG 585
Query: 489 KK----ELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQK 544
K VS Q +VL+ +N ++ + D+ GI+ KEL LQ+ V+ K
Sbjct: 586 KGGKPFNFIVSQIQLMVLLAYNYSKTYTLDDLVKIVGIK-KEL---LQNHVTPFVKY--K 639
Query: 545 LPKGRDVEDDDSFVFNEGFTAPLYRIKVNAI-QMKETVEENTST-TERVFQDRQYQVDAA 602
L K E+ D V + + P + KV+ I + +T EE+ T+ V Q R ++A+
Sbjct: 640 LLK----EEGDQLVIVDHY--PSKKNKVSFIGAITKTKEEDVEEITKEVQQSRTIFLEAS 693
Query: 603 IVRIMKTRKVLSHTLLITELFQQL--KFPIKPADLKKRIESLIDREYLERDKNNPQIYNY 660
IVRIMK++K ++ L+ E+ Q +F K D+K+ I+SLID+EYL+R+ ++ Y Y
Sbjct: 694 IVRIMKSKKSMAPNNLLNEVVVQAGNRFNAKNIDVKRAIDSLIDKEYLKRNGDD---YEY 750
Query: 661 LA 662
++
Sbjct: 751 IS 752
Score = 269 (99.8 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 85/322 (26%), Positives = 156/322 (48%)
Query: 9 IEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQ-- 66
I K+ EE+++ I++L + P+ FL R W + + + Y++R +V++
Sbjct: 79 IYKKLEEYLTEFIKNLK-RLPN-ESFLEFYVRKWTRFTIGAVYMNNVFDYMNRYWVQKER 136
Query: 67 TPNVRSLWDMGLQLFRKYLSSYSEVEHKT-VTGLLRMIERERLGEAVDRTLLNHLLKMFT 125
+ + ++D+ F K+ + K + +L I+++R VD L++ +K
Sbjct: 137 SDGRKDVYDVNTLSFIKWKDEMFKPNSKLLIEQILTCIQQQRDNMIVDTNLISSAIKSLV 196
Query: 126 ALGI------------YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEE 173
L I Y SFE PFLE T E+YA E ++ +V DY+K E R+ EE
Sbjct: 197 FLSIDIQDLKKPNLIIYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEE 256
Query: 174 HERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVN 233
R YL+ T+KPL+ L+E+H + + D+ F +L++ ++ + +QRMY L +RV
Sbjct: 257 VSRSNNYLEERTKKPLLEVLNAALIEKHANEMYDQ-FLVLLEQNQIDHIQRMYKLLARVQ 315
Query: 234 -ALESLRQALAMYIRRTGHGIVMD--------EEKDKDM-----VSSLLEFKASLDTIWE 279
L+ L L +YI++ + + E K K + V +L+ + I
Sbjct: 316 KTLDPLANTLELYIKKEAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVV 375
Query: 280 QSFSKNEAFCNTIKDAFEYLIN 301
++FSK+ F ++ +A + +N
Sbjct: 376 RAFSKDTKFIKSLDNACRHFVN 397
>UNIPROTKB|Q5AJB7 [details] [associations]
symbol:CDC53 "Putative uncharacterized protein CDC53"
species:237561 "Candida albicans SC5314" [GO:0006521 "regulation of
cellular amino acid metabolic process" evidence=IMP] [GO:0010570
"regulation of filamentous growth" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=ISA;IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISA;IMP]
[GO:0070783 "growth of unicellular organism as a thread of attached
cells" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 404 (147.3 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 130/422 (30%), Positives = 220/422 (52%)
Query: 261 KDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN---LRQNRPA------ELI 311
K V +L+ + I ++FSK+ F ++ +A + +N + +P EL+
Sbjct: 357 KVYVHTLISIYNRFNDIVVRAFSKDTKFIKSLDNACRHFVNNNPIATPKPRSPCRTPELL 416
Query: 312 AKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASI 371
A++ D L++ +K + E+ D ++++F+FI +D FE Y++ LAKRL+ G S S
Sbjct: 417 ARYADGFLKSNSK---DNEMNA--DNLMIVFKFIAERDSFEEHYRRLLAKRLVNGTSKSE 471
Query: 372 DAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVL 431
+ E+S+I +L+ E ++T+K+ MF DI+ S ++ FK + S VL
Sbjct: 472 EMEESVIHRLQEENSIEYTSKMTKMFTDIKASDDLKIKFKDGMNVL------FDFSPMVL 525
Query: 432 TTGYWPTYPPMD---VRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKG 488
WP + D ++L EL V D FK YL + G+++ W + G LKA KG
Sbjct: 526 ARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYLQQGKGKQIEWLWNHGRAELKAHLTKG 585
Query: 489 KK----ELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQK 544
K VS Q +VL+ +N ++ + D+ GI+ KEL LQ+ V+ K
Sbjct: 586 KGGKPFNFIVSQIQLMVLLAYNYSKTYTLDDLVKIVGIK-KEL---LQNHVTPFVKY--K 639
Query: 545 LPKGRDVEDDDSFVFNEGFTAPLYRIKVNAI-QMKETVEENTST-TERVFQDRQYQVDAA 602
L K E+ D V + + P + KV+ I + +T EE+ T+ V Q R ++A+
Sbjct: 640 LLK----EEGDQLVIVDHY--PSKKNKVSFIGAITKTKEEDVEEITKEVQQSRTIFLEAS 693
Query: 603 IVRIMKTRKVLSHTLLITELFQQL--KFPIKPADLKKRIESLIDREYLERDKNNPQIYNY 660
IVRIMK++K ++ L+ E+ Q +F K D+K+ I+SLID+EYL+R+ ++ Y Y
Sbjct: 694 IVRIMKSKKSMAPNNLLNEVVVQAGNRFNAKNIDVKRAIDSLIDKEYLKRNGDD---YEY 750
Query: 661 LA 662
++
Sbjct: 751 IS 752
Score = 269 (99.8 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 85/322 (26%), Positives = 156/322 (48%)
Query: 9 IEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQ-- 66
I K+ EE+++ I++L + P+ FL R W + + + Y++R +V++
Sbjct: 79 IYKKLEEYLTEFIKNLK-RLPN-ESFLEFYVRKWTRFTIGAVYMNNVFDYMNRYWVQKER 136
Query: 67 TPNVRSLWDMGLQLFRKYLSSYSEVEHKT-VTGLLRMIERERLGEAVDRTLLNHLLKMFT 125
+ + ++D+ F K+ + K + +L I+++R VD L++ +K
Sbjct: 137 SDGRKDVYDVNTLSFIKWKDEMFKPNSKLLIEQILTCIQQQRDNMIVDTNLISSAIKSLV 196
Query: 126 ALGI------------YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEE 173
L I Y SFE PFLE T E+YA E ++ +V DY+K E R+ EE
Sbjct: 197 FLSIDIQDLKKPNLIIYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEE 256
Query: 174 HERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVN 233
R YL+ T+KPL+ L+E+H + + D+ F +L++ ++ + +QRMY L +RV
Sbjct: 257 VSRSNNYLEERTKKPLLEVLNAALIEKHANEMYDQ-FLVLLEQNQIDHIQRMYKLLARVQ 315
Query: 234 -ALESLRQALAMYIRRTGHGIVMD--------EEKDKDM-----VSSLLEFKASLDTIWE 279
L+ L L +YI++ + + E K K + V +L+ + I
Sbjct: 316 KTLDPLANTLELYIKKEAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVV 375
Query: 280 QSFSKNEAFCNTIKDAFEYLIN 301
++FSK+ F ++ +A + +N
Sbjct: 376 RAFSKDTKFIKSLDNACRHFVN 397
>ASPGD|ASPL0000014731 [details] [associations]
symbol:culC species:162425 "Emericella nidulans"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:BN001302 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
OMA:ATFYGPI EnsemblFungi:CADANIAT00004755 Uniprot:C8V637
Length = 823
Score = 439 (159.6 bits), Expect = 4.9e-56, Sum P(2) = 4.9e-56
Identities = 111/320 (34%), Positives = 177/320 (55%)
Query: 217 HRTEDLQ-RMYSLFSRVN-ALESLRQALAMYIRRTGHGIVMDEEKDKDM----------- 263
H T +Q R+ + + +N A +L QA A + TG +EK+K+
Sbjct: 341 HLTAAVQKRIVEMGNEINNASFALAQAPAQP-KSTGTDAGQKKEKEKEKPVNQVTSSAIK 399
Query: 264 -VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAG 322
V +L K D IW+ +F ++ + I +F +N R +E ++ F DE L+ G
Sbjct: 400 WVDDILALKKKFDGIWKDAFGSDQVLQSAITASFSSFLNSTP-RSSEFLSLFFDENLKKG 458
Query: 323 NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLK 382
KG ++ E++ L+ + L R+I+ KD FEA+YKK L++RLL+ +S S+DAE+ MISK+K
Sbjct: 459 VKGKTDNEVDALLENGITLLRYIKDKDRFEAYYKKHLSRRLLMKRSMSMDAERQMISKMK 518
Query: 383 TECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSG-IEMSVHVLTTGYWPTYPP 441
E G+QFT +LE MF+D+ +S+++ S+KQ + + E+ ++VLT+ WP
Sbjct: 519 MEVGNQFTQRLEAMFRDMTISEDLTASYKQFVREQGDPDKKRFELDINVLTSTMWPMEIM 578
Query: 442 MDVR---------LPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPK--GK- 489
R +P E+ + F++FYL K+SGR+L WQ S+G +KA F + GK
Sbjct: 579 SSSRDGQVELPCIIPKEVETVKQSFEKFYLDKHSGRKLSWQPSMGTADIKATFHRSNGKV 638
Query: 490 --KELAVSLFQTVVLMLFND 507
EL VS + +L+LFND
Sbjct: 639 QRHELNVSTYAMFILLLFND 658
Score = 420 (152.9 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 97/232 (41%), Positives = 140/232 (60%)
Query: 446 LPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPK--GK---KELAVSLFQTV 500
+P E+ + F++FYL K+SGR+L WQ S+G +KA F + GK EL VS +
Sbjct: 592 IPKEVETVKQSFEKFYLDKHSGRKLSWQPSMGTADIKATFHRSNGKVQRHELNVSTYAMF 651
Query: 501 VLMLFND---AQKLSFQDIKDATGIEDKELRRTLQSLACG-KVRVLQKLPKGRDVEDDDS 556
+L+LFND + L+F++I+ T I D +L R LQSLA K RVL+K+P RDV+ D
Sbjct: 652 ILLLFNDIPIGESLTFEEIQARTRIPDNDLIRNLQSLAVAPKTRVLKKVPMSRDVKPTDK 711
Query: 557 FVFNEGFTAPLYRIKVNAIQ----MKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKV 612
F FN F +P ++++ + E+ ++ T E++ +R ++AAIVRIMK RK
Sbjct: 712 FYFNNDFQSPFMKVRIGVVSGGANKVESQDQRKETEEKMNNERGGSIEAAIVRIMKQRKT 771
Query: 613 LSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L H+ LI+E+ QL P +K+RIESLIDREYLER +P Y Y+A
Sbjct: 772 LIHSNLISEVLSQLSARFVPDVNMVKRRIESLIDREYLERVSEDPPTYGYVA 823
Score = 206 (77.6 bits), Expect = 4.9e-56, Sum P(2) = 4.9e-56
Identities = 63/241 (26%), Positives = 119/241 (49%)
Query: 34 FLSLVERCWQD--LCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGL---QLFRKYLSSY 88
FLS + W+D +C M MI + +Y+DR + ++ + M L + R +SS
Sbjct: 120 FLSALSEVWEDHQIC--MKMITDVLMYMDRVVALRKVSIYAA-AMALFRDHVLRSPVSSS 176
Query: 89 SEVEHKTV--TGLLRMIERERLGEAVDRTLLNHLLKMFTAL----------GIYSESFEK 136
+ V + +L MI+ ER G +DR L++ +KM L +Y SFE
Sbjct: 177 NNAVVADVLKSTVLFMIQLERSGHMIDRALIHSCIKMLEGLYETEAEEESSKLYLTSFEP 236
Query: 137 PFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQ 196
+LE ++ FY AEG + ++ D + V R+ EE ERC + + + + + +
Sbjct: 237 DYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAEEKERCQYTISLLSESKIKEIVDNE 296
Query: 197 LLERHISAILD---KGFTMLMDGHRTEDLQRMYSLFSRVNALES-LRQALAMYIRRTGHG 252
L+ +++ +++ G +++D R ++L ++Y+L +RV+ ++ L A+ I G+
Sbjct: 297 LIRNNLAEVVNFEGTGVRVMLDHDRIDNLSKIYALSARVDPKKTHLTAAVQKRIVEMGNE 356
Query: 253 I 253
I
Sbjct: 357 I 357
Score = 50 (22.7 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 37/154 (24%), Positives = 68/154 (44%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDL--CDQMLMIRGIALYL 59
G + Q+ EKE E+ ++ S + D++ + W+D DQ+L A +
Sbjct: 375 GTDAGQKKEKEKEKPVNQVTSSAIKWVDDILALKKKFDGIWKDAFGSDQVLQSAITASF- 433
Query: 60 DRTYVKQTPNVR---SLW-DMGLQLFRKYLSSYSEVEHKTVTG--LLRMIERERLGEAVD 113
+++ TP SL+ D L+ K + +EV+ G LLR I+ + EA
Sbjct: 434 -SSFLNSTPRSSEFLSLFFDENLKKGVKGKTD-NEVDALLENGITLLRYIKDKDRFEAYY 491
Query: 114 RTLLNHLLKMFTALGIYSES--FEKPFLECTSEF 145
+ L+ L M ++ + +E K +E ++F
Sbjct: 492 KKHLSRRLLMKRSMSMDAERQMISKMKMEVGNQF 525
Score = 44 (20.5 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 359 LAKRLLLGKSASIDAEKSMISKL-KTECGSQFTNKLEGMFKDIEL 402
+ RLLL K A +D + + E G +F + L +++D ++
Sbjct: 90 ITPRLLLAKEA-VDMQDQFTEATERRETGERFLSALSEVWEDHQI 133
>UNIPROTKB|F1P2W9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00595196
Ensembl:ENSGALT00000038545 ArrayExpress:F1P2W9 Uniprot:F1P2W9
Length = 687
Score = 549 (198.3 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 137/458 (29%), Positives = 240/458 (52%)
Query: 97 TGLLRMIERERLGEAVDRTLLNHLLKMFT---------ALGIYSESFEKPFLECTSEFYA 147
TG + +E +R GE ++ +++ ++ F L Y E FE PFL T E+Y
Sbjct: 189 TGSRQDLEFDRCGEDPNQKVIHGVINSFVHVEQYKKKLPLKFYQEIFECPFLNETGEYYK 248
Query: 148 AEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILD 207
E +Q+S+ Y++ V RL +E RC YL S+ +I +++++ H+ +
Sbjct: 249 QEASNLLQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKVIHECQQRMVADHLQFLHA 308
Query: 208 KGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAMYIRRTG---HGIVMDEEKDKDM 263
+ ++ R D+ MY+L V++ L + Q L +I G + E
Sbjct: 309 ECHNIIRQEKRN-DMANMYTLLRAVSSGLPHMIQELQNHIHDEGLRATSNLSQENMPTQF 367
Query: 264 VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQNRPA----ELIAKFLDEKL 319
V S+LE + + + ++ F + + A ++N R+ + EL+AK+ D L
Sbjct: 368 VESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPELLAKYCDNLL 427
Query: 320 RAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMIS 379
+ KG +E E+E L + +F++I KDVF+ FY + LAKRL+ G S S+D+E++MI+
Sbjct: 428 KKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMIN 487
Query: 380 KLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR-TKLPSGIEMSVHVLTTGYWP- 437
KLK CG +FT+KL M+ D+ +S ++N F + + T + GI ++VL G WP
Sbjct: 488 KLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTIIDLGISFQIYVLQAGAWPL 547
Query: 438 TYPPMDV-RLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSL 496
T P +P EL +F+ FY +SGR+L W + L +K + V+
Sbjct: 548 TQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLCKPYVAMVTT 607
Query: 497 FQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSL 534
+Q VL+ FN+++ +S+++++D+T + +KEL +T++SL
Sbjct: 608 YQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL 645
Score = 37 (18.1 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 614 SHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKN 653
S T+ EL + K +L K I+SL+D + + D +
Sbjct: 619 SETVSYKELQDSTQMNEK--ELTKTIKSLLDVKMINHDSD 656
>WB|WBGene00000837 [details] [associations]
symbol:cul-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051759 "sister chromosome movement
towards spindle pole involved in meiotic sister chromatid
segregation" evidence=IMP] [GO:0007138 "meiotic anaphase II"
evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0008054 "cyclin catabolic process" evidence=IMP]
[GO:0051232 "meiotic spindle elongation" evidence=IMP] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0008105 "asymmetric protein localization" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 503 (182.1 bits), Expect = 7.3e-53, Sum P(2) = 7.3e-53
Identities = 128/378 (33%), Positives = 202/378 (53%)
Query: 306 RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLL 365
+ +E +A++ D L+ KG SE +LE LD +V+FR+I+ KD+F+ FY K LA RL+
Sbjct: 479 KASERLARYTDGLLKKSTKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANRLIA 538
Query: 366 GKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF-KQSSQARTKLPSG- 423
S S+DAE+ MI+KLK CG +FT+KL MF DI LS+E++ +F K + +T P
Sbjct: 539 STSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDVK 598
Query: 424 -IEMSVHVLTTGYWPTYPPM-----------DV---RLPHELN-VYQDIFKEFYLSKYSG 467
+ +L G WP P DV LP L V Q+ F++FY K++G
Sbjct: 599 FVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRILQPVIQE-FEKFYTGKHNG 657
Query: 468 RRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKEL 527
R+L W ++ ++ + + + ++Q L+ F + +DI + G+ L
Sbjct: 658 RKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILVKDIGEEIGVSGDYL 717
Query: 528 RRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVE-ENTS 586
+T++++ V +L +++ D N T+ + ++ A Q+ + VE E +
Sbjct: 718 LKTIRTIL--DVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEA 773
Query: 587 TTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLID 644
V QDR+Y ++ AIVRIMKTRKVL H L+TE+ Q K P +KK IE LI+
Sbjct: 774 VANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIE 833
Query: 645 REYLERDKNNPQIYNYLA 662
+ Y++R N + Y YLA
Sbjct: 834 KMYIQRTDQNDE-YQYLA 850
Score = 403 (146.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 101/324 (31%), Positives = 166/324 (51%)
Query: 130 YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPL 189
Y ESFEKP L T ++Y+A K + +Y++ V + L +E R YL S+ + +
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 190 IATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAMYIRR 248
I ++ +++ H L L+ +DL+ MY L + A L + + Y+++
Sbjct: 355 ITLCQKVMIKAHKDK-LHAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEYVKK 413
Query: 249 TGHGIVM---DEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLR-- 303
G V E + V ++L + + F + F + + A + ++N +
Sbjct: 414 KGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNSKEP 473
Query: 304 -QNRP--AELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLA 360
Q+ P +E +A++ D L+ KG SE +LE LD +V+FR+I+ KD+F+ FY K LA
Sbjct: 474 GQSVPKASERLARYTDGLLKKSTKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLA 533
Query: 361 KRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF-KQSSQARTK 419
RL+ S S+DAE+ MI+KLK CG +FT+KL MF DI LS+E++ +F K + +T
Sbjct: 534 NRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTV 593
Query: 420 LPSG--IEMSVHVLTTGYWPTYPP 441
P + +L G WP P
Sbjct: 594 QPDVKFVPTQTMILQAGSWPLNAP 617
Score = 75 (31.5 bits), Expect = 7.3e-53, Sum P(2) = 7.3e-53
Identities = 72/337 (21%), Positives = 142/337 (42%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
LY ++ +EH+ + +V PDL+ L + W+ + + I + YL++ +V
Sbjct: 134 LYNEVKACIQEHVRQKRQDIVDVDPDLL--LQEYHKMWRVFHEGAIFIHRLFGYLNKQFV 191
Query: 65 KQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMF 124
KQ + D L F +Y +++ ++ G L + E E + +T+L L+K+
Sbjct: 192 KQ----KRCTD--LDNFAQY-AAFLQIPDVKEIGCLAL---EIWKEDLVKTILPQLVKLL 241
Query: 125 TALGIYSESFEKPFLECTSEFYAA-EGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV 183
+ I ++ + F +E M+++D D + R ++ E +
Sbjct: 242 L-IAIDNDR-KGNFPHIANEVSGVINSFVKMEETDF-DVVPAEGAR-YKARESTTAFYQE 297
Query: 184 STRKPLI--------ATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNAL 235
S KPL+ A A++ L + S +++ +L + E + Y S V +
Sbjct: 298 SFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLL---EQEEMRAKKYLHESSVEKV 354
Query: 236 ESLRQALAMYIRRTG-----HGIVMDEE-KD-KDMVSSLLEFKASLDTIWEQSFSKNEAF 288
+L Q + + + H ++ +EE KD ++M L +A L ++ + F E +
Sbjct: 355 ITLCQKVMIKAHKDKLHAVCHDLITNEENKDLRNMYRLLKPIQAGL-SVMVKEF---EEY 410
Query: 289 CNTIKDAFEYLINLR-QNRPAELIAKFLDEKLRAGNK 324
K E + L +N P + F++ LR NK
Sbjct: 411 VK--KKGLEAVSRLTGENVPQQ----FVENVLRVYNK 441
>UNIPROTKB|Q17390 [details] [associations]
symbol:cul-2 "Cullin-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 503 (182.1 bits), Expect = 7.3e-53, Sum P(2) = 7.3e-53
Identities = 128/378 (33%), Positives = 202/378 (53%)
Query: 306 RPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLL 365
+ +E +A++ D L+ KG SE +LE LD +V+FR+I+ KD+F+ FY K LA RL+
Sbjct: 479 KASERLARYTDGLLKKSTKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANRLIA 538
Query: 366 GKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF-KQSSQARTKLPSG- 423
S S+DAE+ MI+KLK CG +FT+KL MF DI LS+E++ +F K + +T P
Sbjct: 539 STSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDVK 598
Query: 424 -IEMSVHVLTTGYWPTYPPM-----------DV---RLPHELN-VYQDIFKEFYLSKYSG 467
+ +L G WP P DV LP L V Q+ F++FY K++G
Sbjct: 599 FVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRILQPVIQE-FEKFYTGKHNG 657
Query: 468 RRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKEL 527
R+L W ++ ++ + + + ++Q L+ F + +DI + G+ L
Sbjct: 658 RKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILVKDIGEEIGVSGDYL 717
Query: 528 RRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVE-ENTS 586
+T++++ V +L +++ D N T+ + ++ A Q+ + VE E +
Sbjct: 718 LKTIRTIL--DVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEA 773
Query: 587 TTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLID 644
V QDR+Y ++ AIVRIMKTRKVL H L+TE+ Q K P +KK IE LI+
Sbjct: 774 VANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIE 833
Query: 645 REYLERDKNNPQIYNYLA 662
+ Y++R N + Y YLA
Sbjct: 834 KMYIQRTDQNDE-YQYLA 850
Score = 403 (146.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 101/324 (31%), Positives = 166/324 (51%)
Query: 130 YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPL 189
Y ESFEKP L T ++Y+A K + +Y++ V + L +E R YL S+ + +
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 190 IATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAMYIRR 248
I ++ +++ H L L+ +DL+ MY L + A L + + Y+++
Sbjct: 355 ITLCQKVMIKAHKDK-LHAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEYVKK 413
Query: 249 TGHGIVM---DEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLR-- 303
G V E + V ++L + + F + F + + A + ++N +
Sbjct: 414 KGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNSKEP 473
Query: 304 -QNRP--AELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLA 360
Q+ P +E +A++ D L+ KG SE +LE LD +V+FR+I+ KD+F+ FY K LA
Sbjct: 474 GQSVPKASERLARYTDGLLKKSTKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLA 533
Query: 361 KRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF-KQSSQARTK 419
RL+ S S+DAE+ MI+KLK CG +FT+KL MF DI LS+E++ +F K + +T
Sbjct: 534 NRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTV 593
Query: 420 LPSG--IEMSVHVLTTGYWPTYPP 441
P + +L G WP P
Sbjct: 594 QPDVKFVPTQTMILQAGSWPLNAP 617
Score = 75 (31.5 bits), Expect = 7.3e-53, Sum P(2) = 7.3e-53
Identities = 72/337 (21%), Positives = 142/337 (42%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
LY ++ +EH+ + +V PDL+ L + W+ + + I + YL++ +V
Sbjct: 134 LYNEVKACIQEHVRQKRQDIVDVDPDLL--LQEYHKMWRVFHEGAIFIHRLFGYLNKQFV 191
Query: 65 KQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMF 124
KQ + D L F +Y +++ ++ G L + E E + +T+L L+K+
Sbjct: 192 KQ----KRCTD--LDNFAQY-AAFLQIPDVKEIGCLAL---EIWKEDLVKTILPQLVKLL 241
Query: 125 TALGIYSESFEKPFLECTSEFYAA-EGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV 183
+ I ++ + F +E M+++D D + R ++ E +
Sbjct: 242 L-IAIDNDR-KGNFPHIANEVSGVINSFVKMEETDF-DVVPAEGAR-YKARESTTAFYQE 297
Query: 184 STRKPLI--------ATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNAL 235
S KPL+ A A++ L + S +++ +L + E + Y S V +
Sbjct: 298 SFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLL---EQEEMRAKKYLHESSVEKV 354
Query: 236 ESLRQALAMYIRRTG-----HGIVMDEE-KD-KDMVSSLLEFKASLDTIWEQSFSKNEAF 288
+L Q + + + H ++ +EE KD ++M L +A L ++ + F E +
Sbjct: 355 ITLCQKVMIKAHKDKLHAVCHDLITNEENKDLRNMYRLLKPIQAGL-SVMVKEF---EEY 410
Query: 289 CNTIKDAFEYLINLR-QNRPAELIAKFLDEKLRAGNK 324
K E + L +N P + F++ LR NK
Sbjct: 411 VK--KKGLEAVSRLTGENVPQQ----FVENVLRVYNK 441
>FB|FBgn0039632 [details] [associations]
symbol:Cul-5 "Cullin-5" species:7227 "Drosophila
melanogaster" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0016360 "sensory organ precursor cell
fate determination" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007293 "germarium-derived
egg chamber formation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0007295 "growth
of a germarium-derived egg chamber" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014297 GO:GO:0008285 GO:GO:0007528 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0016360 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0008582 GO:GO:0007293 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:43434 KO:K10612 OMA:EVTTFQM FlyBase:FBgn0039632
EMBL:BT133427 RefSeq:NP_651665.2 UniGene:Dm.5893 SMR:Q9VAQ0
IntAct:Q9VAQ0 MINT:MINT-906434 STRING:Q9VAQ0
EnsemblMetazoa:FBtr0085417 GeneID:43434 KEGG:dme:Dmel_CG1401
UCSC:CG1401-RA InParanoid:Q9VAQ0 GenomeRNAi:43434 NextBio:833902
Uniprot:Q9VAQ0
Length = 852
Score = 405 (147.6 bits), Expect = 4.0e-49, Sum P(2) = 4.0e-49
Identities = 115/382 (30%), Positives = 206/382 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + E+++ L VL++ +++ KDVF ++K L +
Sbjct: 478 ESKCPELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDVFMRYHKVHLTR 537
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQARTK 419
RL+LG SA + E+ ++ L+ E G + + N+L MF+DI++S+++N F RT
Sbjct: 538 RLILGTSADSEKEEDIVEWLR-EVGMPADYVNRLARMFQDIKVSEDLNTQF------RTS 590
Query: 420 LPSGIEMSVHVLTTGYWPTYPP-MDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGH 478
+ +++ +L G W + V LP EL Y +EFY K+SGR+L W + + +
Sbjct: 591 ISRHDAINIKILNAGAWARCSERVSVSLPIELEDYIPDVEEFYKKKHSGRKLQWYHHMSN 650
Query: 479 CVLKAEFPKGKKELAVSLFQTVVLMLFNDAQ--KLSFQDIKDATGIEDKELRRTLQSL-A 535
+ G+ +L V+ FQ VL +N Q K+S+++++ AT + D ELRRTL SL A
Sbjct: 651 GTITFVNNFGRYDLDVTTFQMAVLFAWNQRQHDKISYENLRLATELPDPELRRTLWSLVA 710
Query: 536 CGKVR--VLQKLPKG----RDVEDDDSFVFNEGFTA-----PLYRIKVNAI-QMKETVEE 583
K++ +L P +D ++ F N+ F R K+N I +++ + E
Sbjct: 711 FPKIKKQILLMEPAAISSPKDFAENTMFYINQEFAIVKNGKSQRRGKLNLIGRLQLSTER 770
Query: 584 NTST-TERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIE 640
+ + + Q R + AI++IMK RK +++ L EL LK P+ +K+++E
Sbjct: 771 SQQEDNQSIVQLRILRTQEAIIKIMKVRKRMNNAALQGELIDILKNMFLPSKKMIKEQLE 830
Query: 641 SLIDREYLERDKNNPQIYNYLA 662
LI+ +Y+ RD ++ ++ Y+A
Sbjct: 831 WLIENKYMRRDDDDINMFIYVA 852
Score = 181 (68.8 bits), Expect = 4.0e-49, Sum P(2) = 4.0e-49
Identities = 61/242 (25%), Positives = 116/242 (47%)
Query: 78 LQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG--------I 129
L + K++ + +++H+ ++++ ER G+A D L+ + + + L I
Sbjct: 218 LDSWNKHI--FHDIKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNLSSNAEDKLEI 275
Query: 130 YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPL 189
Y E+FE +L+ T EFY + + Q++ V Y+K+ + +L EE R YL+ S+ L
Sbjct: 276 YRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEPSSFSIL 335
Query: 190 IATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVN---ALESLRQALAMYI 246
T L+ H+++I+ + ++ D + TE L M+ L RV +E + L +I
Sbjct: 336 TYTLVNVLIVDHLNSIIAECPALIRD-YETERLNLMFRLMDRVMHGVGVEPMMGDLQRHI 394
Query: 247 RRTG------HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKD-AFEYL 299
G V+ ++ +K V LLE + +F+ + F T +D AF+ +
Sbjct: 395 MSAGLADMLSASEVITQDSEK-YVERLLELFNKFSDLVRNAFNDDPRFL-TARDIAFKTV 452
Query: 300 IN 301
+N
Sbjct: 453 VN 454
>SGD|S000002290 [details] [associations]
symbol:CDC53 "Cullin" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IMP;IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 SGD:S000002290
GO:GO:0005634 GO:GO:0005737 GO:GO:0000086 GO:GO:0051301
GO:GO:0000082 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030674 GO:GO:0003688 GO:GO:0019005 eggNOG:COG5647
SUPFAM:SSF75632 EMBL:X96876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 EMBL:U43564 EMBL:Z74180 PIR:S67675
RefSeq:NP_010150.1 PDB:3O2P PDB:3O6B PDBsum:3O2P PDBsum:3O6B
ProteinModelPortal:Q12018 SMR:Q12018 DIP:DIP-1234N IntAct:Q12018
MINT:MINT-384023 STRING:Q12018 PaxDb:Q12018 PeptideAtlas:Q12018
EnsemblFungi:YDL132W GeneID:851424 KEGG:sce:YDL132W CYGD:YDL132w
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY OrthoDB:EOG4W3WW4 EvolutionaryTrace:Q12018
NextBio:968633 Genevestigator:Q12018 GermOnline:YDL132W
Uniprot:Q12018
Length = 815
Score = 328 (120.5 bits), Expect = 3.6e-48, Sum P(3) = 3.6e-48
Identities = 91/329 (27%), Positives = 164/329 (49%)
Query: 261 KDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQ------------NRPA 308
KD + LLE I+ +SF + + +A IN+ + ++ +
Sbjct: 377 KDYIKKLLEVHDIFSKIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTS 436
Query: 309 ELIAKFLDEKLRAGNKGTSEEELEGTLDK-VLVLFRFIQGKDVFEAFYKKDLAKRLLLGK 367
E++AK+ D L+ K T E D+ ++ +F+++ KD FE Y++ AKRL+ G
Sbjct: 437 EMLAKYSDILLK---KATKPEVASDMSDEDIITIFKYLTDKDAFETHYRRLFAKRLIHGT 493
Query: 368 SASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF-----KQSSQARTKLPS 422
S S + E+++I +L+ ++T K+ MF+DI LSK + + F + ++ K P
Sbjct: 494 STSAEDEENIIQRLQAANSMEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYP- 552
Query: 423 GIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVL 481
++ VL WP +Y ++ +LP EL + KE Y K++GR L W L L
Sbjct: 553 --DLQPFVLAENMWPFSYQEVEFKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRGEL 610
Query: 482 KAEFPK-GKK--ELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGK 538
KA+ K G+ V+LFQ +L+L+NDA L+ ++I++ T + + + + K
Sbjct: 611 KADIGKPGRMPFNFTVTLFQMAILLLYNDADVLTLENIQEGTSLTIQHIAAAMVPFI--K 668
Query: 539 VRVLQKLPKGRD--VEDDDSFVFNEGFTA 565
+++Q++P G D V+ + F + + A
Sbjct: 669 FKLIQQVPPGLDALVKPETQFKLSRPYKA 697
Score = 178 (67.7 bits), Expect = 3.6e-48, Sum P(3) = 3.6e-48
Identities = 56/266 (21%), Positives = 115/266 (43%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+G +Y++++ + +I L + + FL + W+ + + Y++
Sbjct: 82 VGSEIYEKLKNYLKNYI------LNFKQSNSETFLQFYVKRWKRFTIGAIFLNHAFDYMN 135
Query: 61 RTYVKQ--TPNVRSLWDMGLQLFRKYLS-SYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
R +V++ + R ++D+ + + + + LL + R G+ + R+ +
Sbjct: 136 RYWVQKERSDGKRHIFDVNTLCLMTWKEVMFDPSKDVLINELLDQVTLGREGQIIQRSNI 195
Query: 118 NHLLKMFTALGI------------YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKH 165
+ +K ALGI Y + FEKPFL+ T E+Y Y+++ V +Y+
Sbjct: 196 STAIKSLVALGIDPQDLKKLNLNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFE 255
Query: 166 VEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRM 225
+ E + +Y D T+KPL + L+ HI L+ F +L+D E + +
Sbjct: 256 AHEIIKREEKAMTIYWDDHTKKPLSMALNKVLITDHIEK-LENEFVVLLDARDIEKITSL 314
Query: 226 YSLFSR-VNALESLRQALAMYIRRTG 250
Y+L R + + Y+++TG
Sbjct: 315 YALIRRDFTLIPRMASVFENYVKKTG 340
Score = 121 (47.7 bits), Expect = 3.6e-48, Sum P(3) = 3.6e-48
Identities = 33/92 (35%), Positives = 51/92 (55%)
Query: 573 NAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQL--KFPI 630
N + K E+ E + +RQ ++A IVRIMK ++ L HT L+ E Q +F
Sbjct: 726 NKLGNKRLTEDERIEKE-LNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNA 784
Query: 631 KPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
K + +K+ I+SLI + YL+R + + Y YLA
Sbjct: 785 KVSMVKRAIDSLIQKGYLQRGDDG-ESYAYLA 815
Score = 37 (18.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 443 DVRLPHELNVYQDIFKEFYLSKY--SGRRLMWQNSLGHCVLKA 483
D R+ ELN + IF E + + + R L + C+ ++
Sbjct: 736 DERIEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQS 778
>MGI|MGI:1922967 [details] [associations]
symbol:Cul5 "cullin 5" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0051480 "cytosolic
calcium ion homeostasis" evidence=ISO] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1922967
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000007610 KO:K10612 CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AK014894 EMBL:AK030306
EMBL:AK031955 EMBL:AK046030 EMBL:AK080305 EMBL:BC075710
IPI:IPI00988369 RefSeq:NP_001155090.1 RefSeq:NP_082083.2
UniGene:Mm.218910 UniGene:Mm.482399 PDB:2WZK PDBsum:2WZK
ProteinModelPortal:Q9D5V5 SMR:Q9D5V5 IntAct:Q9D5V5 STRING:Q9D5V5
PhosphoSite:Q9D5V5 PaxDb:Q9D5V5 PRIDE:Q9D5V5 GeneID:75717
KEGG:mmu:75717 InParanoid:Q9D5V5 EvolutionaryTrace:Q9D5V5
NextBio:343766 Bgee:Q9D5V5 CleanEx:MM_CUL5 Genevestigator:Q9D5V5
GermOnline:ENSMUSG00000032030 Uniprot:Q9D5V5
Length = 780
Score = 360 (131.8 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 107/363 (29%), Positives = 196/363 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + EE+E L +VL++ +++Q KDVF ++K L +
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N++FK+ + +
Sbjct: 461 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKL 519
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL +EFY +SGR+L W + +
Sbjct: 520 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMS 578
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL
Sbjct: 579 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 638
Query: 535 ACGKVR--VLQKLPK---GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P+ +D + F N+ F+ + KV + TTE
Sbjct: 639 AFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSL-IKNAKVQKRGKINLIGRLQLTTE 697
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE 649
R+ ++ + +RI++T++ I ++ + K I A L+ + ++ +L
Sbjct: 698 RMREEENEGI--VQLRILRTQEA------IIQIMKMRK-KISNAQLQTELVEILKNMFLP 748
Query: 650 RDK 652
+ K
Sbjct: 749 QKK 751
Score = 205 (77.2 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 79/317 (24%), Positives = 150/317 (47%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
++Q ++++ E I A ++ D + + + W+ Q ++ L+ T +
Sbjct: 61 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVE-WRKFFTQCDILPKPFCQLEVTLL 119
Query: 65 -KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
KQ+ N +S +M + RK + S +S ++++ ++++ ERLGEA D L+
Sbjct: 120 GKQSSNKKS--NMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 118 NHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIR 169
+ + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 170 LHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGF--TMLMD--G----HRTED 221
L EE +R L YL+ TR+ + L+E ++A++ F T+L + G + TE
Sbjct: 238 LKEEEKRALRYLE--TRRE--CNSVEALMECCVNALVTS-FKETILAECQGMIKRNETEK 292
Query: 222 LQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQ 280
L M+SL +V N +E + + L +I G DMV++ + EQ
Sbjct: 293 LHLMFSLMDKVPNGIEPMLKDLEEHIISAGLA---------DMVAAAETITTDSEKYVEQ 343
Query: 281 SFSKNEAFCNTIKDAFE 297
+ F +K+AF+
Sbjct: 344 LLTLFNRFSKLVKEAFQ 360
Score = 167 (63.8 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 58/169 (34%), Positives = 93/169 (55%)
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR--VLQKLPK---GRDVEDDDSFVFNEG 562
+K+SF+++K AT + D ELRRTL SL A K++ VL P+ +D + F N+
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQD 671
Query: 563 FT----APLY-RIKVNAI-QMKETVEE-NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
F+ A + R K+N I +++ T E E + Q R + AI++IMK RK +S+
Sbjct: 672 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 731
Query: 616 TLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L TEL + LK P +K+++E LI+ Y+ RD+ + + Y+A
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFIYMA 780
Score = 58 (25.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA-ILDKG 209
+KY+Q DV +R H+ H L LD+S + L E + A ++K
Sbjct: 441 LKYVQNKDV-------FMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 493
Query: 210 FTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
M D +EDL + + + N L ++ + I G +K VS E
Sbjct: 494 ARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAG---AWSRSSEKVFVSLPTE 550
Query: 270 FKASLDTIWEQSFSKNEA 287
+ + + E+ + KN +
Sbjct: 551 LEDLIPEV-EEFYKKNHS 567
Score = 42 (19.8 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 383 TECGSQFTNKLEGMFKDIELSKEINESFKQS--SQARTKLPSGIEMSVHV---------- 430
T G Q +NK M +D + K + +++ +S S + +L VH
Sbjct: 117 TLLGKQSSNKKSNM-EDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQ 175
Query: 431 LTTGYWPTYPPMDVRLPHELNVYQDIFKEFYL 462
L G +Y + +L +Y+D F++ YL
Sbjct: 176 LVIGVRESYVNLCSNPEDKLQIYRDNFEKAYL 207
>RGD|621742 [details] [associations]
symbol:Cul5 "cullin 5" species:10116 "Rattus norvegicus"
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005000
"vasopressin receptor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin
ligase complex" evidence=ISO;TAS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 RGD:621742
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0004842 GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0005000 GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000007610 KO:K10612
OMA:EVTTFQM CTD:8065 HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ
EMBL:AF135115 IPI:IPI00325517 RefSeq:NP_073174.1 UniGene:Rn.163001
ProteinModelPortal:Q9JJ31 STRING:Q9JJ31 PhosphoSite:Q9JJ31
PRIDE:Q9JJ31 Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 360 (131.8 bits), Expect = 6.1e-46, Sum P(2) = 6.1e-46
Identities = 107/363 (29%), Positives = 196/363 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + EE+E L +VL++ +++Q KDVF ++K L +
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N++FK+ + +
Sbjct: 461 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKL 519
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL +EFY +SGR+L W + +
Sbjct: 520 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMS 578
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL
Sbjct: 579 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 638
Query: 535 ACGKVR--VLQKLPK---GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P+ +D + F N+ F+ + KV + TTE
Sbjct: 639 AFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSL-IKNAKVQKRGKINLIGRLQLTTE 697
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE 649
R+ ++ + +RI++T++ I ++ + K I A L+ + ++ +L
Sbjct: 698 RMREEENEGI--VQLRILRTQEA------IIQIMKMRK-KISNAQLQTELVEILKNMFLP 748
Query: 650 RDK 652
+ K
Sbjct: 749 QKK 751
Score = 199 (75.1 bits), Expect = 6.1e-46, Sum P(2) = 6.1e-46
Identities = 78/317 (24%), Positives = 149/317 (47%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
++Q ++++ E I A ++ D + + + W+ Q ++ L+ T +
Sbjct: 61 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVE-WRKFFTQCDILPKPFCQLEVTLL 119
Query: 65 -KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
KQ+ N +S +M + RK + S +S ++++ ++++ ERLGEA D L+
Sbjct: 120 GKQSSNKKS--NMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 118 NHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIR 169
+ + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 170 LHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGF--TMLMD--G----HRTED 221
L EE +R L YL+ TR+ + L+E ++A++ F T+L + G + TE
Sbjct: 238 LKEEEKRALRYLE--TRRE--CNSVEALMECCVNALVTS-FKETILAECQGMIKRNETEK 292
Query: 222 LQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQ 280
L M+SL +V +E + + L +I G DMV++ + EQ
Sbjct: 293 LHLMFSLMDKVPGGIEPMLKDLEEHIISAGLA---------DMVAAAETITTDSEKYVEQ 343
Query: 281 SFSKNEAFCNTIKDAFE 297
+ F +K+AF+
Sbjct: 344 LLTLFNRFSKLVKEAFQ 360
Score = 171 (65.3 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 59/169 (34%), Positives = 94/169 (55%)
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR--VLQKLPK---GRDVEDDDSFVFNEG 562
+K+SF+++K AT + D ELRRTL SL A K++ VL P+ +D + F N+
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQD 671
Query: 563 FT----APLY-RIKVNAI-QMKETVEE-NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
F+ A + R K+N I +++ T E E + Q R + AI++IMK RK +S+
Sbjct: 672 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 731
Query: 616 TLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L TEL + LK P +K++IE LI+ +Y+ RD+ + + Y+A
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA 780
Score = 58 (25.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA-ILDKG 209
+KY+Q DV +R H+ H L LD+S + L E + A ++K
Sbjct: 441 LKYVQNKDV-------FMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 493
Query: 210 FTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
M D +EDL + + + N L ++ + I G +K VS E
Sbjct: 494 ARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAG---AWSRSSEKVFVSLPTE 550
Query: 270 FKASLDTIWEQSFSKNEA 287
+ + + E+ + KN +
Sbjct: 551 LEDLIPEV-EEFYKKNHS 567
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 383 TECGSQFTNKLEGMFKDIELSKEINESFKQS--SQARTKLPSGIEMSVHV---------- 430
T G Q +NK M +D + K + +++ +S S + +L VH
Sbjct: 117 TLLGKQSSNKKSNM-EDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQ 175
Query: 431 LTTGYWPTYPPMDVRLPHELNVYQDIFKEFYL 462
L G +Y + +L +Y+D F++ YL
Sbjct: 176 LVIGVRESYVNLCSNPEDKLQIYRDNFEKAYL 207
>UNIPROTKB|Q9JJ31 [details] [associations]
symbol:Cul5 "Cullin-5" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:621742 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006970
GO:GO:0006511 GO:GO:0051480 GO:GO:0004842 GO:GO:0000209
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0005000 GO:GO:0031466
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AF135115 IPI:IPI00325517
RefSeq:NP_073174.1 UniGene:Rn.163001 ProteinModelPortal:Q9JJ31
STRING:Q9JJ31 PhosphoSite:Q9JJ31 PRIDE:Q9JJ31
Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 360 (131.8 bits), Expect = 6.1e-46, Sum P(2) = 6.1e-46
Identities = 107/363 (29%), Positives = 196/363 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + EE+E L +VL++ +++Q KDVF ++K L +
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N++FK+ + +
Sbjct: 461 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKL 519
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL +EFY +SGR+L W + +
Sbjct: 520 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMS 578
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL
Sbjct: 579 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 638
Query: 535 ACGKVR--VLQKLPK---GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P+ +D + F N+ F+ + KV + TTE
Sbjct: 639 AFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSL-IKNAKVQKRGKINLIGRLQLTTE 697
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE 649
R+ ++ + +RI++T++ I ++ + K I A L+ + ++ +L
Sbjct: 698 RMREEENEGI--VQLRILRTQEA------IIQIMKMRK-KISNAQLQTELVEILKNMFLP 748
Query: 650 RDK 652
+ K
Sbjct: 749 QKK 751
Score = 199 (75.1 bits), Expect = 6.1e-46, Sum P(2) = 6.1e-46
Identities = 78/317 (24%), Positives = 149/317 (47%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
++Q ++++ E I A ++ D + + + W+ Q ++ L+ T +
Sbjct: 61 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVE-WRKFFTQCDILPKPFCQLEVTLL 119
Query: 65 -KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
KQ+ N +S +M + RK + S +S ++++ ++++ ERLGEA D L+
Sbjct: 120 GKQSSNKKS--NMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 118 NHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIR 169
+ + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 170 LHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGF--TMLMD--G----HRTED 221
L EE +R L YL+ TR+ + L+E ++A++ F T+L + G + TE
Sbjct: 238 LKEEEKRALRYLE--TRRE--CNSVEALMECCVNALVTS-FKETILAECQGMIKRNETEK 292
Query: 222 LQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQ 280
L M+SL +V +E + + L +I G DMV++ + EQ
Sbjct: 293 LHLMFSLMDKVPGGIEPMLKDLEEHIISAGLA---------DMVAAAETITTDSEKYVEQ 343
Query: 281 SFSKNEAFCNTIKDAFE 297
+ F +K+AF+
Sbjct: 344 LLTLFNRFSKLVKEAFQ 360
Score = 171 (65.3 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 59/169 (34%), Positives = 94/169 (55%)
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR--VLQKLPK---GRDVEDDDSFVFNEG 562
+K+SF+++K AT + D ELRRTL SL A K++ VL P+ +D + F N+
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQD 671
Query: 563 FT----APLY-RIKVNAI-QMKETVEE-NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
F+ A + R K+N I +++ T E E + Q R + AI++IMK RK +S+
Sbjct: 672 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 731
Query: 616 TLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L TEL + LK P +K++IE LI+ +Y+ RD+ + + Y+A
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA 780
Score = 58 (25.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA-ILDKG 209
+KY+Q DV +R H+ H L LD+S + L E + A ++K
Sbjct: 441 LKYVQNKDV-------FMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 493
Query: 210 FTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
M D +EDL + + + N L ++ + I G +K VS E
Sbjct: 494 ARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAG---AWSRSSEKVFVSLPTE 550
Query: 270 FKASLDTIWEQSFSKNEA 287
+ + + E+ + KN +
Sbjct: 551 LEDLIPEV-EEFYKKNHS 567
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 383 TECGSQFTNKLEGMFKDIELSKEINESFKQS--SQARTKLPSGIEMSVHV---------- 430
T G Q +NK M +D + K + +++ +S S + +L VH
Sbjct: 117 TLLGKQSSNKKSNM-EDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQ 175
Query: 431 LTTGYWPTYPPMDVRLPHELNVYQDIFKEFYL 462
L G +Y + +L +Y+D F++ YL
Sbjct: 176 LVIGVRESYVNLCSNPEDKLQIYRDNFEKAYL 207
>UNIPROTKB|F1N7B5 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:DAAA02040193
EMBL:DAAA02040192 IPI:IPI00924344 Ensembl:ENSBTAT00000061240
ArrayExpress:F1N7B5 Uniprot:F1N7B5
Length = 759
Score = 360 (131.8 bits), Expect = 6.7e-46, Sum P(2) = 6.7e-46
Identities = 107/363 (29%), Positives = 196/363 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + EE+E L +VL++ +++Q KDVF ++K L +
Sbjct: 380 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 439
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N++FK+ + +
Sbjct: 440 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKL 498
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL +EFY +SGR+L W + +
Sbjct: 499 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMS 557
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL
Sbjct: 558 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 617
Query: 535 ACGKVR--VLQKLPK---GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P+ +D + F N+ F+ + KV + TTE
Sbjct: 618 AFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSL-IKNAKVQKRGKINLIGRLQLTTE 676
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE 649
R+ ++ + +RI++T++ I ++ + K I A L+ + ++ +L
Sbjct: 677 RMREEENEGI--VQLRILRTQEA------IIQIMKMRK-KISNAQLQTELVEILKNMFLP 727
Query: 650 RDK 652
+ K
Sbjct: 728 QKK 730
Score = 198 (74.8 bits), Expect = 6.7e-46, Sum P(2) = 6.7e-46
Identities = 78/317 (24%), Positives = 149/317 (47%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
++Q ++++ E I A ++ D + + + W+ Q ++ L+ T +
Sbjct: 40 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVE-WRKFFTQCDILPKPFCQLEITLM 98
Query: 65 -KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
KQ N +S ++ + RK + S +S ++++ ++++ ERLGEA D L+
Sbjct: 99 GKQGSNKKS--NVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 156
Query: 118 NHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIR 169
+ + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +
Sbjct: 157 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 216
Query: 170 LHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGF--TMLMD--G----HRTED 221
L EE +R L YL+ TR+ + L+E ++A++ F T+L + G + TE
Sbjct: 217 LKEEEKRALRYLE--TRRE--CNSVEALMECCVNALVTS-FKETILAECQGMIKRNETEK 271
Query: 222 LQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQ 280
L M+SL +V N +E + + L +I G DMV++ + EQ
Sbjct: 272 LHLMFSLMDKVPNGIEPMLKDLEEHIISAGLA---------DMVAAAETITTDSEKYVEQ 322
Query: 281 SFSKNEAFCNTIKDAFE 297
+ F +K+AF+
Sbjct: 323 LLTLFNRFSKLVKEAFQ 339
Score = 174 (66.3 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 59/169 (34%), Positives = 95/169 (56%)
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR--VLQKLPK---GRDVEDDDSFVFNEG 562
+K+SF+++K AT + D ELRRTL SL A K++ VL P+ +D + F N+
Sbjct: 591 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQE 650
Query: 563 FT----APLY-RIKVNAI-QMKETVEE-NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
F+ A + R K+N I +++ T E E + Q R + AI++IMK RK +S+
Sbjct: 651 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 710
Query: 616 TLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L TEL + LK P +K++IE LI+ +Y+ RD+++ + Y+A
Sbjct: 711 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 759
Score = 58 (25.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA-ILDKG 209
+KY+Q DV +R H+ H L LD+S + L E + A ++K
Sbjct: 420 LKYVQNKDV-------FMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 472
Query: 210 FTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
M D +EDL + + + N L ++ + I G +K VS E
Sbjct: 473 ARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAG---AWSRSSEKVFVSLPTE 529
Query: 270 FKASLDTIWEQSFSKNEA 287
+ + + E+ + KN +
Sbjct: 530 LEDLIPEV-EEFYKKNHS 546
Score = 38 (18.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 23/102 (22%), Positives = 44/102 (43%)
Query: 364 LLGKSAS---IDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKL 420
L+GK S + E S++ KL + + E +F +I+ + +S + A +L
Sbjct: 97 LMGKQGSNKKSNVEDSIVRKLMLDTWN------ESIFSNIK--NRLQDSAMKLVHAE-RL 147
Query: 421 PSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYL 462
+ L G +Y + +L +Y+D F++ YL
Sbjct: 148 GEAFDSQ---LVIGVRESYVNLCSNPEDKLQIYRDNFEKAYL 186
>UNIPROTKB|Q93034 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006970 "response to osmotic stress"
evidence=IEA] [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IDA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005262 "calcium channel
activity" evidence=TAS] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0070588 "calcium ion
transmembrane transport" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0016032
EMBL:CH471065 GO:GO:0000082 GO:GO:0008283 GO:GO:0005262
GO:GO:0004872 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0097193 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466
GO:GO:0031625 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM EMBL:X81882
EMBL:AF017061 EMBL:AF327710 EMBL:AK292575 EMBL:BC063306
IPI:IPI00216003 RefSeq:NP_003469.2 UniGene:Hs.440320
UniGene:Hs.701122 PDB:3DPL PDB:3DQV PDBsum:3DPL PDBsum:3DQV
ProteinModelPortal:Q93034 SMR:Q93034 DIP:DIP-43696N IntAct:Q93034
MINT:MINT-1184052 STRING:Q93034 PhosphoSite:Q93034 DMDM:14917099
PaxDb:Q93034 PRIDE:Q93034 Ensembl:ENST00000393094
Ensembl:ENST00000531427 GeneID:8065 KEGG:hsa:8065 UCSC:uc001pjv.3
CTD:8065 GeneCards:GC11P107913 HGNC:HGNC:2556 HPA:CAB017787
HPA:HPA002185 MIM:601741 neXtProt:NX_Q93034 PharmGKB:PA27052
HOVERGEN:HBG099672 InParanoid:Q93034 OrthoDB:EOG46Q6RZ
PhylomeDB:Q93034 EvolutionaryTrace:Q93034 GenomeRNAi:8065
NextBio:30655 ArrayExpress:Q93034 Bgee:Q93034 CleanEx:HS_CUL5
Genevestigator:Q93034 GermOnline:ENSG00000166266 Uniprot:Q93034
Length = 780
Score = 360 (131.8 bits), Expect = 7.8e-46, Sum P(2) = 7.8e-46
Identities = 107/363 (29%), Positives = 196/363 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + EE+E L +VL++ +++Q KDVF ++K L +
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N++FK+ + +
Sbjct: 461 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKL 519
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL +EFY +SGR+L W + +
Sbjct: 520 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMS 578
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL
Sbjct: 579 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 638
Query: 535 ACGKVR--VLQKLPK---GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P+ +D + F N+ F+ + KV + TTE
Sbjct: 639 AFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSL-IKNAKVQKRGKINLIGRLQLTTE 697
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE 649
R+ ++ + +RI++T++ I ++ + K I A L+ + ++ +L
Sbjct: 698 RMREEENEGI--VQLRILRTQEA------IIQIMKMRK-KISNAQLQTELVEILKNMFLP 748
Query: 650 RDK 652
+ K
Sbjct: 749 QKK 751
Score = 198 (74.8 bits), Expect = 7.8e-46, Sum P(2) = 7.8e-46
Identities = 78/317 (24%), Positives = 149/317 (47%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
++Q ++++ E I A ++ D + + + W+ Q ++ L+ T +
Sbjct: 61 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVE-WRKFFTQCDILPKPFCQLEITLM 119
Query: 65 -KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
KQ N +S ++ + RK + S +S ++++ ++++ ERLGEA D L+
Sbjct: 120 GKQGSNKKS--NVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 118 NHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIR 169
+ + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 170 LHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGF--TMLMD--G----HRTED 221
L EE +R L YL+ TR+ + L+E ++A++ F T+L + G + TE
Sbjct: 238 LKEEEKRALRYLE--TRRE--CNSVEALMECCVNALVTS-FKETILAECQGMIKRNETEK 292
Query: 222 LQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQ 280
L M+SL +V N +E + + L +I G DMV++ + EQ
Sbjct: 293 LHLMFSLMDKVPNGIEPMLKDLEEHIISAGLA---------DMVAAAETITTDSEKYVEQ 343
Query: 281 SFSKNEAFCNTIKDAFE 297
+ F +K+AF+
Sbjct: 344 LLTLFNRFSKLVKEAFQ 360
Score = 174 (66.3 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 59/169 (34%), Positives = 95/169 (56%)
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR--VLQKLPK---GRDVEDDDSFVFNEG 562
+K+SF+++K AT + D ELRRTL SL A K++ VL P+ +D + F N+
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQE 671
Query: 563 FT----APLY-RIKVNAI-QMKETVEE-NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
F+ A + R K+N I +++ T E E + Q R + AI++IMK RK +S+
Sbjct: 672 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 731
Query: 616 TLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L TEL + LK P +K++IE LI+ +Y+ RD+++ + Y+A
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
Score = 58 (25.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA-ILDKG 209
+KY+Q DV +R H+ H L LD+S + L E + A ++K
Sbjct: 441 LKYVQNKDV-------FMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 493
Query: 210 FTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
M D +EDL + + + N L ++ + I G +K VS E
Sbjct: 494 ARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAG---AWSRSSEKVFVSLPTE 550
Query: 270 FKASLDTIWEQSFSKNEA 287
+ + + E+ + KN +
Sbjct: 551 LEDLIPEV-EEFYKKNHS 567
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 23/102 (22%), Positives = 44/102 (43%)
Query: 364 LLGKSAS---IDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKL 420
L+GK S + E S++ KL + + E +F +I+ + +S + A +L
Sbjct: 118 LMGKQGSNKKSNVEDSIVRKLMLDTWN------ESIFSNIK--NRLQDSAMKLVHAE-RL 168
Query: 421 PSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYL 462
+ L G +Y + +L +Y+D F++ YL
Sbjct: 169 GEAFDSQ---LVIGVRESYVNLCSNPEDKLQIYRDNFEKAYL 207
>UNIPROTKB|I3LFR2 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10612 OMA:EVTTFQM CTD:8065
EMBL:FP340346 RefSeq:XP_003357323.1 ProteinModelPortal:I3LFR2
SMR:I3LFR2 PRIDE:I3LFR2 Ensembl:ENSSSCT00000029949 GeneID:100525708
KEGG:ssc:100525708 Uniprot:I3LFR2
Length = 780
Score = 360 (131.8 bits), Expect = 7.8e-46, Sum P(2) = 7.8e-46
Identities = 107/363 (29%), Positives = 196/363 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + EE+E L +VL++ +++Q KDVF ++K L +
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N++FK+ + +
Sbjct: 461 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKL 519
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL +EFY +SGR+L W + +
Sbjct: 520 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMS 578
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL
Sbjct: 579 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 638
Query: 535 ACGKVR--VLQKLPK---GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P+ +D + F N+ F+ + KV + TTE
Sbjct: 639 AFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSL-IKNAKVQKRGKINLIGRLQLTTE 697
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE 649
R+ ++ + +RI++T++ I ++ + K I A L+ + ++ +L
Sbjct: 698 RMREEENEGI--VQLRILRTQEA------IIQIMKMRK-KISNAQLQTELVEILKNMFLP 748
Query: 650 RDK 652
+ K
Sbjct: 749 QKK 751
Score = 198 (74.8 bits), Expect = 7.8e-46, Sum P(2) = 7.8e-46
Identities = 78/317 (24%), Positives = 149/317 (47%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
++Q ++++ E I A ++ D + + + W+ Q ++ L+ T +
Sbjct: 61 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVE-WRKFFTQCDILPKPFCQLEITLM 119
Query: 65 -KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
KQ N +S ++ + RK + S +S ++++ ++++ ERLGEA D L+
Sbjct: 120 GKQGSNKKS--NVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 118 NHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIR 169
+ + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 170 LHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGF--TMLMD--G----HRTED 221
L EE +R L YL+ TR+ + L+E ++A++ F T+L + G + TE
Sbjct: 238 LKEEEKRALRYLE--TRRE--CNSVEALMECCVNALVTS-FKETILAECQGMIKRNETEK 292
Query: 222 LQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQ 280
L M+SL +V N +E + + L +I G DMV++ + EQ
Sbjct: 293 LHLMFSLMDKVPNGIEPMLKDLEEHIISAGLA---------DMVAAAETITTDSEKYVEQ 343
Query: 281 SFSKNEAFCNTIKDAFE 297
+ F +K+AF+
Sbjct: 344 LLTLFNRFSKLVKEAFQ 360
Score = 174 (66.3 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 59/169 (34%), Positives = 95/169 (56%)
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR--VLQKLPK---GRDVEDDDSFVFNEG 562
+K+SF+++K AT + D ELRRTL SL A K++ VL P+ +D + F N+
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQE 671
Query: 563 FT----APLY-RIKVNAI-QMKETVEE-NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
F+ A + R K+N I +++ T E E + Q R + AI++IMK RK +S+
Sbjct: 672 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 731
Query: 616 TLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L TEL + LK P +K++IE LI+ +Y+ RD+++ + Y+A
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
Score = 58 (25.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA-ILDKG 209
+KY+Q DV +R H+ H L LD+S + L E + A ++K
Sbjct: 441 LKYVQNKDV-------FMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 493
Query: 210 FTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
M D +EDL + + + N L ++ + I G +K VS E
Sbjct: 494 ARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAG---AWSRSSEKVFVSLPTE 550
Query: 270 FKASLDTIWEQSFSKNEA 287
+ + + E+ + KN +
Sbjct: 551 LEDLIPEV-EEFYKKNHS 567
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 23/102 (22%), Positives = 44/102 (43%)
Query: 364 LLGKSAS---IDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKL 420
L+GK S + E S++ KL + + E +F +I+ + +S + A +L
Sbjct: 118 LMGKQGSNKKSNVEDSIVRKLMLDTWN------ESIFSNIK--NRLQDSAMKLVHAE-RL 168
Query: 421 PSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYL 462
+ L G +Y + +L +Y+D F++ YL
Sbjct: 169 GEAFDSQ---LVIGVRESYVNLCSNPEDKLQIYRDNFEKAYL 207
>UNIPROTKB|J9PAX0 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:AAEX03003515
Ensembl:ENSCAFT00000043293 Uniprot:J9PAX0
Length = 759
Score = 360 (131.8 bits), Expect = 8.5e-46, Sum P(2) = 8.5e-46
Identities = 107/363 (29%), Positives = 196/363 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + EE+E L +VL++ +++Q KDVF ++K L +
Sbjct: 380 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 439
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N++FK+ + +
Sbjct: 440 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKL 498
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL +EFY +SGR+L W + +
Sbjct: 499 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMS 557
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL
Sbjct: 558 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 617
Query: 535 ACGKVR--VLQKLPK---GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P+ +D + F N+ F+ + KV + TTE
Sbjct: 618 AFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSL-IKNAKVQKRGKINLIGRLQLTTE 676
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE 649
R+ ++ + +RI++T++ I ++ + K I A L+ + ++ +L
Sbjct: 677 RMREEENEGI--VQLRILRTQEA------IIQIMKMRK-KISNAQLQTELVEILKNMFLP 727
Query: 650 RDK 652
+ K
Sbjct: 728 QKK 730
Score = 197 (74.4 bits), Expect = 8.5e-46, Sum P(2) = 8.5e-46
Identities = 78/317 (24%), Positives = 148/317 (46%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
++Q ++++ E I A ++ D + + + W+ Q ++ L+ T +
Sbjct: 40 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVE-WRKFFTQCDILPKPFCQLEITLM 98
Query: 65 -KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
KQ N +S + + RK + S +S ++++ ++++ ERLGEA D L+
Sbjct: 99 GKQGSNKKSTVEDSI--VRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 156
Query: 118 NHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIR 169
+ + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +
Sbjct: 157 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 216
Query: 170 LHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGF--TMLMD--G----HRTED 221
L EE +R L YL+ TR+ + L+E ++A++ F T+L + G + TE
Sbjct: 217 LKEEEKRALRYLE--TRRE--CNSVEALMECCVNALVTS-FKETILAECQGMIKRNETEK 271
Query: 222 LQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQ 280
L M+SL +V N +E + + L +I G DMV++ + EQ
Sbjct: 272 LHLMFSLMDKVPNGIEPMLKDLEEHIISAGLA---------DMVAAAETITTDSEKYVEQ 322
Query: 281 SFSKNEAFCNTIKDAFE 297
+ F +K+AF+
Sbjct: 323 LLTLFNRFSKLVKEAFQ 339
Score = 174 (66.3 bits), Expect = 4.5e-25, Sum P(2) = 4.5e-25
Identities = 59/169 (34%), Positives = 95/169 (56%)
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR--VLQKLPK---GRDVEDDDSFVFNEG 562
+K+SF+++K AT + D ELRRTL SL A K++ VL P+ +D + F N+
Sbjct: 591 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQE 650
Query: 563 FT----APLY-RIKVNAI-QMKETVEE-NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
F+ A + R K+N I +++ T E E + Q R + AI++IMK RK +S+
Sbjct: 651 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 710
Query: 616 TLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L TEL + LK P +K++IE LI+ +Y+ RD+++ + Y+A
Sbjct: 711 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 759
Score = 58 (25.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA-ILDKG 209
+KY+Q DV +R H+ H L LD+S + L E + A ++K
Sbjct: 420 LKYVQNKDV-------FMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 472
Query: 210 FTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
M D +EDL + + + N L ++ + I G +K VS E
Sbjct: 473 ARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAG---AWSRSSEKVFVSLPTE 529
Query: 270 FKASLDTIWEQSFSKNEA 287
+ + + E+ + KN +
Sbjct: 530 LEDLIPEV-EEFYKKNHS 546
Score = 37 (18.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 383 TECGSQFTNKLEGMFKDIELSKEINESFKQS--SQARTKLPSGIEMSVHV---------- 430
T G Q +NK + +D + K + +++ +S S + +L VH
Sbjct: 96 TLMGKQGSNK-KSTVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQ 154
Query: 431 LTTGYWPTYPPMDVRLPHELNVYQDIFKEFYL 462
L G +Y + +L +Y+D F++ YL
Sbjct: 155 LVIGVRESYVNLCSNPEDKLQIYRDNFEKAYL 186
>UNIPROTKB|A6NE76 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002476
EMBL:AL451005 HGNC:HGNC:2555 IPI:IPI00644450
ProteinModelPortal:A6NE76 SMR:A6NE76 STRING:A6NE76 PRIDE:A6NE76
Ensembl:ENST00000371323 HOGENOM:HOG000006909 HOVERGEN:HBG084579
ArrayExpress:A6NE76 Bgee:A6NE76 Uniprot:A6NE76
Length = 234
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 92/178 (51%), Positives = 126/178 (70%)
Query: 1 MGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
+ NLY+++ + CE+HI A I S D V+FL ++RCWQ+ C QM+MIR I L+LD
Sbjct: 56 ISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLD 115
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHL 120
RTYV Q + S+WDMGL+LFR ++ S +V++KT+ G+L +IERER GEA+DR+LL L
Sbjct: 116 RTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSL 175
Query: 121 LKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCL 178
L M + L IY +SFE+ FLE T+ YAAEG K MQ+ +VP+YL HV RL EE +R +
Sbjct: 176 LSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLI 233
>UNIPROTKB|F1P0F9 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:AADN02005055 IPI:IPI00593656
Ensembl:ENSGALT00000027725 Uniprot:F1P0F9
Length = 776
Score = 359 (131.4 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 107/363 (29%), Positives = 196/363 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + EE+E L +VL++ +++Q KDVF ++K L +
Sbjct: 397 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 456
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N++FK+ + +
Sbjct: 457 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKL 515
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL +EFY +SGR+L W + +
Sbjct: 516 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMS 574
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL
Sbjct: 575 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 634
Query: 535 ACGKVR--VLQKLPK---GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P+ +D + F N+ F+ + KV + TTE
Sbjct: 635 AFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSL-IKNAKVQKRGKINLIGRLQLTTE 693
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE 649
R+ ++ + +RI++T++ I ++ + K I A L+ + ++ +L
Sbjct: 694 RMREEENEGI--VQLRILRTQEA------IIQIMKMRK-KITNAQLQTELVEILKNMFLP 744
Query: 650 RDK 652
+ K
Sbjct: 745 QKK 747
Score = 195 (73.7 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 77/317 (24%), Positives = 149/317 (47%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
++Q ++++ + I A ++ D + + + W+ Q ++ L+ T +
Sbjct: 57 IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVE-WRKFFTQCDILPKPFCQLEITLM 115
Query: 65 -KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
KQ N +S ++ + RK + S +S ++++ ++++ ERLGEA D L+
Sbjct: 116 GKQGSNKKS--NVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 173
Query: 118 NHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIR 169
+ + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +
Sbjct: 174 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 233
Query: 170 LHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGF--TMLMD--G----HRTED 221
L EE +R L YL+ TR+ + L+E ++A++ F T+L + G + TE
Sbjct: 234 LKEEEKRALRYLE--TRRE--CNSVEALMECCVNALVTS-FKETILAECQGMIKRNETEK 288
Query: 222 LQRMYSLFSRV-NALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQ 280
L M+SL +V N +E + + L +I G DMV++ + EQ
Sbjct: 289 LHLMFSLMDKVPNGIEPMLKDLEEHIVSAGLA---------DMVAAAETITTDSEKYVEQ 339
Query: 281 SFSKNEAFCNTIKDAFE 297
+ F +K+AF+
Sbjct: 340 LLTLFNRFSKLVKEAFQ 356
Score = 171 (65.3 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 58/169 (34%), Positives = 95/169 (56%)
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR--VLQKLPK---GRDVEDDDSFVFNEG 562
+K+SF+++K AT + D ELRRTL SL A K++ VL P+ +D + F N+
Sbjct: 608 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQE 667
Query: 563 FT----APLY-RIKVNAI-QMKETVEE-NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
F+ A + R K+N I +++ T E E + Q R + AI++IMK RK +++
Sbjct: 668 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKITN 727
Query: 616 TLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L TEL + LK P +K++IE LI+ +Y+ RD+++ + Y+A
Sbjct: 728 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 776
Score = 58 (25.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA-ILDKG 209
+KY+Q DV +R H+ H L LD+S + L E + A ++K
Sbjct: 437 LKYVQNKDV-------FMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 489
Query: 210 FTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
M D +EDL + + + N L ++ + I G +K VS E
Sbjct: 490 ARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAG---AWSRSSEKVFVSLPTE 546
Query: 270 FKASLDTIWEQSFSKNEA 287
+ + + E+ + KN +
Sbjct: 547 LEDLIPEV-EEFYKKNHS 563
Score = 38 (18.4 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 23/102 (22%), Positives = 44/102 (43%)
Query: 364 LLGKSAS---IDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKL 420
L+GK S + E S++ KL + + E +F +I+ + +S + A +L
Sbjct: 114 LMGKQGSNKKSNVEDSIVRKLMLDTWN------ESIFSNIK--NRLQDSAMKLVHAE-RL 164
Query: 421 PSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYL 462
+ L G +Y + +L +Y+D F++ YL
Sbjct: 165 GEAFDSQ---LVIGVRESYVNLCSNPEDKLQIYRDNFEKAYL 203
>ZFIN|ZDB-GENE-030131-5426 [details] [associations]
symbol:cul5a "cullin 5a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-5426 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX572630
IPI:IPI00836478 Ensembl:ENSDART00000110111 ArrayExpress:F1REN0
Bgee:F1REN0 Uniprot:F1REN0
Length = 780
Score = 347 (127.2 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 105/363 (28%), Positives = 194/363 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + E++E L +VL++ +++Q KDVF ++K L +
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEDIELKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N+ FK+ + +
Sbjct: 461 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKL 519
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL ++FY +SGR+L W + +
Sbjct: 520 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMS 578
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL
Sbjct: 579 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 638
Query: 535 ACGKVR--VLQKLPK---GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P+ +D D F N+ F+ + K + TTE
Sbjct: 639 AFPKLKRQVLLYEPQVSSPKDFTDSTLFFVNQEFSL-IKNSKAQKRGKINLIGRLQLTTE 697
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE 649
R+ ++ + +RI++T++ I ++ + K I A L+ + ++ +L
Sbjct: 698 RMREEENEGI--VQLRILRTQEA------IIQIMKMRK-KITNAQLQTELVEILKNMFLP 748
Query: 650 RDK 652
+ K
Sbjct: 749 QKK 751
Score = 190 (71.9 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 62/229 (27%), Positives = 114/229 (49%)
Query: 86 SSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------ALGIYSESFEKP 137
S +S ++++ ++++ ERLGEA D L+ + + + L IY ++FEK
Sbjct: 146 SIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKS 205
Query: 138 FLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQL 197
+L+ T FY + Y+QQ+ V +Y+K+ + +L EE +R L YL+ TR+ + + L
Sbjct: 206 YLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLREEEKRALRYLE--TRRE--CNSVQAL 261
Query: 198 LERHISAILDKGF--TMLMD--G----HRTEDLQRMYSLFSRV-NALESLRQALAMYIRR 248
+E ++A++ F T+L + G + T+ L M+SL +V N +E + + L +I
Sbjct: 262 MECCVNALVTS-FKETILAECPGMIKRNETDKLHLMFSLMDKVPNGIEPMLKDLEEHIIS 320
Query: 249 TGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFE 297
G DMV++ + EQ + F +K+AF+
Sbjct: 321 AGLA---------DMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQ 360
Score = 175 (66.7 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 58/169 (34%), Positives = 93/169 (55%)
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR--VLQKLPK---GRDVEDDDSFVFNEG 562
+K+SF+++K AT + D ELRRTL SL A K++ VL P+ +D D F N+
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVSSPKDFTDSTLFFVNQE 671
Query: 563 FTA-----PLYRIKVNAI-QMKETVEE-NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
F+ R K+N I +++ T E E + Q R + AI++IMK RK +++
Sbjct: 672 FSLIKNSKAQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKITN 731
Query: 616 TLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L TEL + LK P +K++IE LI+ +Y++RD+ + + Y+A
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA 780
Score = 58 (25.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA-ILDKG 209
+KY+Q DV +R H+ H L LD+S + L E + A ++K
Sbjct: 441 LKYVQNKDV-------FMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 493
Query: 210 FTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
M D +EDL +++ + N L ++ + I G +K VS E
Sbjct: 494 ARMFQDIKVSEDLNQVFKEMHKHNKLALPADSVNIKILNAG---AWSRSSEKVFVSLPTE 550
Query: 270 FKASLDTIWEQSFSKNEA 287
+ + + E + KN +
Sbjct: 551 LEDLIPEV-EDFYKKNHS 567
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 21/97 (21%), Positives = 41/97 (42%)
Query: 366 GKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIE 425
G S + E S++ KL + + E +F +I+ + +S + A +L +
Sbjct: 123 GSSKKSNVEDSIVRKLMLDTWN------ESIFSNIK--NRLQDSAMKLVHAE-RLGEAFD 173
Query: 426 MSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYL 462
L G +Y + +L +Y+D F++ YL
Sbjct: 174 SQ---LVIGVRESYVNLCSNPEDKLQIYRDNFEKSYL 207
>UNIPROTKB|F1P9Q4 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:AAEX03003515 Ensembl:ENSCAFT00000023239 Uniprot:F1P9Q4
Length = 715
Score = 350 (128.3 bits), Expect = 4.7e-42, Sum P(2) = 4.7e-42
Identities = 97/305 (31%), Positives = 171/305 (56%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + EE+E L +VL++ +++Q KDVF ++K L +
Sbjct: 411 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 470
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N++FK+ + +
Sbjct: 471 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKL 529
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL +EFY +SGR+L W + +
Sbjct: 530 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMS 588
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL
Sbjct: 589 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 648
Query: 535 ACGKVR--VLQKLPK---GRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P+ +D + F N+ F+ + KV + TTE
Sbjct: 649 AFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSL-IKNAKVQKRGKINLIGRLQLTTE 707
Query: 590 RVFQD 594
R+ ++
Sbjct: 708 RMREE 712
Score = 171 (65.3 bits), Expect = 4.7e-42, Sum P(2) = 4.7e-42
Identities = 76/324 (23%), Positives = 152/324 (46%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
++Q ++++ E I A ++ D + + + W+ Q ++ L+ T +
Sbjct: 56 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVE-WRKFFTQCDILPKPFCQLEITLM 114
Query: 65 -KQTPNVRSLWDMGLQLFRKYL------SSYSEVEHKTVTGLLRMIERERLGEAVDRTLL 117
KQ N +S + + RK + S +S ++++ ++++ ERLGEA D L+
Sbjct: 115 GKQGSNKKSTVEDSI--VRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 172
Query: 118 NHLLKMFT--------ALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIR 169
+ + + L IY ++FEK +L+ T FY + Y+QQ+ V +Y+K+ + +
Sbjct: 173 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 232
Query: 170 LHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGF--TMLMD--G--HRTEDLQ 223
L EE +R L YL+ TR+ + L+E ++A++ F T+L + G R E
Sbjct: 233 LKEEEKRALRYLE--TRRE--CNSVEALMECCVNALVTS-FKETILAECQGMIKRNETES 287
Query: 224 R-MYSLFSRVNALESLRQALAMYIRRTGHGIV-MDEEKDKDMVSS-LLEFKASLDTIW-- 278
R Y + L ++ + + +GI M ++ ++ ++S+ L + A+ +TI
Sbjct: 288 RYQYLCVEDGSGFSELHLMFSL-MDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTD 346
Query: 279 -----EQSFSKNEAFCNTIKDAFE 297
EQ + F +K+AF+
Sbjct: 347 SEKYVEQLLTLFNRFSKLVKEAFQ 370
>ZFIN|ZDB-GENE-091113-45 [details] [associations]
symbol:cul5b "cullin 5b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-091113-45 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:CT827807
IPI:IPI00897211 Ensembl:ENSDART00000130179 Bgee:F1QFY1
Uniprot:F1QFY1
Length = 795
Score = 357 (130.7 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 106/363 (29%), Positives = 195/363 (53%)
Query: 304 QNRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK 361
+++ EL+A + D LR +K + EE+E L +VL++ +++Q KDVF ++K L +
Sbjct: 416 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 475
Query: 362 RLLLGKSASIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQA-RT 418
RL+L SA + E++M+ L+ E G + + NKL MF+DI++S+++N+SFK+ + +
Sbjct: 476 RLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKL 534
Query: 419 KLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG 477
LP+ +++ +L G W + + V LP EL ++FY +SGR+L W + +
Sbjct: 535 ALPAD-SVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMS 593
Query: 478 HCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL- 534
+ ++ + G+ +L V+ FQ VL +N +++SF+++K AT + D ELRRTL SL
Sbjct: 594 NGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLV 653
Query: 535 ACGKVR--VLQKLP---KGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTE 589
A K++ VL P +D + F N+ F+ + KV + TTE
Sbjct: 654 AFPKLKRQVLSYEPVVGSPKDFAEGTVFSINQEFSL-IKNSKVQKRGKINLIGRLQLTTE 712
Query: 590 RVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLE 649
R+ ++ + +RI++T++ I ++ + K I A L+ + ++ +L
Sbjct: 713 RMREEENEGI--VQLRILRTQEA------IIQIMKMRK-RISNAQLQTELVEILKNMFLP 763
Query: 650 RDK 652
+ K
Sbjct: 764 QKK 766
Score = 169 (64.5 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 57/169 (33%), Positives = 92/169 (54%)
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR--VLQKLP---KGRDVEDDDSFVFNEG 562
+++SF+++K AT + D ELRRTL SL A K++ VL P +D + F N+
Sbjct: 627 ERISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPVVGSPKDFAEGTVFSINQE 686
Query: 563 FTA-----PLYRIKVNAI-QMKETVEE-NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH 615
F+ R K+N I +++ T E E + Q R + AI++IMK RK +S+
Sbjct: 687 FSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKRISN 746
Query: 616 TLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 662
L TEL + LK P +K++IE LI+ +Y++RD+ + + Y+A
Sbjct: 747 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA 795
Score = 165 (63.1 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 61/235 (25%), Positives = 112/235 (47%)
Query: 86 SSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------ALGIYSESFEKP 137
S + ++ + ++++ ERLGEA D L+ + + + L IY E+FEK
Sbjct: 146 SIFCNIKSRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNTDDKLQIYRENFEKS 205
Query: 138 FLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQL 197
+L+ T FY + Y+QQ+ V +Y+K+ + +L EE +R L YL+ TR+ + + L
Sbjct: 206 YLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLREEEKRALRYLE--TRRE--CNSVQAL 261
Query: 198 LERHISAILDKGF--TMLMD--GH-RTEDLQRMYSLFSRVNALESLRQALAMYIR-RTGH 251
+E ++A++ F T+L + G + + + Y S S L + +
Sbjct: 262 MECCVNALVTS-FKETILTECPGMIKRNETESEYGRSSGTKGSASSELHLMFSLMDKVPS 320
Query: 252 GI--VMDEEKDKDMVSSLLEFKASLDTIW-------EQSFSKNEAFCNTIKDAFE 297
GI ++ + +D M + L + AS +TI EQ + F +K+AF+
Sbjct: 321 GIEPMLKDLEDHIMSAGLADMVASAETITTDSEKYVEQLLTLFNRFSKLVKEAFQ 375
Score = 56 (24.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 32/138 (23%), Positives = 54/138 (39%)
Query: 151 MKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISA-ILDKG 209
+KY+Q DV +R H+ H L LD+S + L E + A ++K
Sbjct: 456 LKYVQNKDV-------FMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 508
Query: 210 FTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
M D +EDL + + + N L ++ + I G +K VS E
Sbjct: 509 ARMFQDIKVSEDLNQSFKEMHKHNKLALPADSVNIKILNAG---AWSRSSEKVFVSLPTE 565
Query: 270 FKASLDTIWEQSFSKNEA 287
+ + + E + KN +
Sbjct: 566 LEDLIPEV-EDFYKKNHS 582
Score = 37 (18.1 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 22/97 (22%), Positives = 44/97 (45%)
Query: 379 SKLK-TECGSQFTNKLEGMFKDIELSKEINESFKQS--SQARTKLPSGIEMSVHV----- 430
SKL+ T G+Q +NK + +D + K + +++ +S +++L VH
Sbjct: 112 SKLEITLLGNQGSNKKSNV-EDSIVRKLMLDTWNESIFCNIKSRLQDSAMKLVHAERLGE 170
Query: 431 -----LTTGYWPTYPPMDVRLPHELNVYQDIFKEFYL 462
L G +Y + +L +Y++ F++ YL
Sbjct: 171 AFDSQLVIGVRESYVNLCSNTDDKLQIYRENFEKSYL 207
>TAIR|locus:2118111 [details] [associations]
symbol:AT4G12100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006511 GO:GO:0031461
EMBL:AL049638 EMBL:AL161533 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 EMBL:AY133688 IPI:IPI00544547 PIR:T06617
RefSeq:NP_192947.1 UniGene:At.33506 ProteinModelPortal:Q9SZ75
SMR:Q9SZ75 PaxDb:Q9SZ75 PRIDE:Q9SZ75 EnsemblPlants:AT4G12100.1
GeneID:826818 KEGG:ath:AT4G12100 TAIR:At4g12100 eggNOG:NOG327349
HOGENOM:HOG000153571 OMA:HECEPHI PhylomeDB:Q9SZ75
ProtClustDB:CLSN2915908 Genevestigator:Q9SZ75 Uniprot:Q9SZ75
Length = 434
Score = 442 (160.7 bits), Expect = 2.0e-41, P = 2.0e-41
Identities = 110/300 (36%), Positives = 167/300 (55%)
Query: 5 LYQRIEKECEEHISAAIRSL---VGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
++ ++ ECE HI+ I+SL S D VFL V W D +M ++ +A+Y
Sbjct: 127 VFNLVKHECEPHIAELIQSLEKNCSGSDDPSVFLPHVYNRWLDFKRKMSLVSDVAMY--- 183
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRT--LLNH 119
QT N +LWD+G +LF K LS +++ + +TG+LR+I ERLG+A + T LL +
Sbjct: 184 ----QTLNGLTLWDVGQKLFHKQLSMAPQLQDQVITGILRLITDERLGKAANNTSDLLKN 239
Query: 120 LLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERC-- 177
L+ MF + ++ PFL+ TS+FYA E + +Q+SD+ YLK+VE E E+C
Sbjct: 240 LMDMFRMQWQCTYVYKDPFLDSTSKFYAEEAEQVLQRSDISHYLKYVERTFLAEEEKCDK 299
Query: 178 LLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALES 237
+ S+R L+ + QLLE H S+ L++GF +LMD +DL+RMY LFS V++ +
Sbjct: 300 HYFFFSSSRSRLMKVLKSQLLEAH-SSFLEEGFMLLMDESLIDDLRRMYRLFSMVDSEDY 358
Query: 238 LRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFE 297
+ + L YI G G + SL E S+D IW Q F +++ TI+D FE
Sbjct: 359 IDRILRAYILAKGEGARQE--------GSLQELHTSIDKIWHQCFGQDDLLDKTIRDCFE 410
>UNIPROTKB|F1SR60 [details] [associations]
symbol:F1SR60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
GeneTree:ENSGT00550000074299 Ensembl:ENSSSCT00000017678 OMA:FNHRARI
Uniprot:F1SR60
Length = 308
Score = 393 (143.4 bits), Expect = 6.5e-36, P = 6.5e-36
Identities = 94/259 (36%), Positives = 146/259 (56%)
Query: 412 QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFY--LSKYSGRR 469
QS+ + +P + + Y + + L H + D+ FY + K G
Sbjct: 56 QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGS-ADLNATFYGPVKKEDGSE 114
Query: 470 LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRR 529
+ +G + + K L VS FQ +LMLFN+ +K +F++I+ T I ++EL R
Sbjct: 115 V----GVGGAQVTGSNTR-KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 169
Query: 530 TLQSLACGKV--RVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENT 585
LQSLACGK RVL K PK +++E+ F N+ FT+ L+R+K+ + K E+ E
Sbjct: 170 ALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERK 229
Query: 586 STTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLI 643
T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI
Sbjct: 230 ETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLI 289
Query: 644 DREYLERDKNNPQIYNYLA 662
+REYL R + ++Y Y+A
Sbjct: 290 EREYLARTPEDRKVYTYVA 308
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 423 GIEMSVHVLTTGYWPTY---PPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHC 479
G++++V VLTTGYWPT P ++ P + ++ IF+ FYL+K+SGR+L Q+ +G
Sbjct: 40 GVDLTVRVLTTGYWPTQSATPKCNIP-PAPRHAFE-IFRRFYLAKHSGRQLTLQHHMGSA 97
Query: 480 VLKAEF 485
L A F
Sbjct: 98 DLNATF 103
>SGD|S000003235 [details] [associations]
symbol:CUL3 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IC;ISS] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 SGD:S000003235 GO:GO:0005634 GO:GO:0005737
EMBL:BK006941 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787 GO:GO:0031463
InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869 OrthoDB:EOG48H0BR
EMBL:AY387706 EMBL:Z72788 PIR:S64292 RefSeq:NP_011517.1
ProteinModelPortal:P53202 SMR:P53202 DIP:DIP-5506N IntAct:P53202
MINT:MINT-531464 STRING:P53202 PaxDb:P53202 EnsemblFungi:YGR003W
GeneID:852886 KEGG:sce:YGR003W CYGD:YGR003w HOGENOM:HOG000112081
OMA:SERSMLV NextBio:972541 Genevestigator:P53202 GermOnline:YGR003W
Uniprot:P53202
Length = 744
Score = 402 (146.6 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 144/556 (25%), Positives = 265/556 (47%)
Query: 134 FEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATA 193
FE + T E+Y + + + + K ++R E +L+V + L
Sbjct: 199 FEPVLISATEEYYN-KAIDIELLTPIESLEKIRKLRQFESMLDSS-FLNVDSHNKLKTVL 256
Query: 194 ERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGI 253
E L+ +S I++ M + LQ +Y L S ++ +++ YI + I
Sbjct: 257 ENVLIWGKLSDIIEDLTHEAMVISNGKLLQEIYDLSSEEKYRVTVIESIKSYINKNAINI 316
Query: 254 VMDE---EKDKDMV---SSLLEFKAS----LDTIWEQSFSKNEA---FCNTIK-DAFEYL 299
+E +K ++ + S ++E S L++I S N N I D F
Sbjct: 317 PFNEGNRKKGQNAITWSSEIVELYRSQHSFLESIDFGSVRLNNLTGDVSNAILGDVFSMY 376
Query: 300 INLRQNRPAELIAKFLDEKL-RAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKD 358
+ P+E ++ ++D + R K +++ L L + KD+FE YKK
Sbjct: 377 FSKEGALPSEYLSTYVDHCMKRTKEKDAEIVKIKQDLLDSTKLIGLLTEKDIFEKIYKKQ 436
Query: 359 LAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQART 418
L++RLL +S ++ EK M+ +K G+ FT+KLE M +DI LS E+ ++F+ S+
Sbjct: 437 LSRRLLQQRSL-VEIEKWMVQMIKKVLGTFFTSKLEIMLRDISLSSEMYQAFQHSTINSI 495
Query: 419 KLPSGIEMSVHVLTTGYWP--TYPPMD--VRLPHELNVYQDIFKEFYLSKYSGRRLMWQN 474
+ + + VLT WP + P+D + LP ++ F+ +Y KY R L W +
Sbjct: 496 EY---LSFAPQVLTRTSWPFQSTNPIDEGISLPPRMSQILAGFEGYYSLKYKERVLKWAH 552
Query: 475 SLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSL 534
L + +F G E++ S++ V+ +LF D ++L+ +I + T I +++ + S+
Sbjct: 553 HLSVIEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYELTHIPIDDVKSLVMSM 612
Query: 535 AC-GKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQ--MKETVEENTSTTERV 591
+ + ++L+K +++ F N F++P ++KV I + +N +T V
Sbjct: 613 STIPRCKILKKSSSSGNMK----FSVNYFFSSPNRKVKVPVIACPLPSQKSDNLATASSV 668
Query: 592 -FQDRQY--QVDAAIVRIMKTRKVLSHTLLI--TELFQQLKFPIKPADLKKRIESLIDRE 646
D + ++ A IVRIMKT LSH L+ T Q + + P+ LK+ I+ LI++E
Sbjct: 669 DTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKE 728
Query: 647 YLERDKNNPQIYNYLA 662
Y++R+ ++P Y+YL+
Sbjct: 729 YIQRNADDPSYYHYLS 744
>RGD|1563853 [details] [associations]
symbol:Cul4a "cullin 4A" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0051246 "regulation of
protein metabolic process" evidence=ISO] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISO] InterPro:IPR001373
Pfam:PF00888 RGD:1563853 GO:GO:0006511 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 IPI:IPI00952377
Ensembl:ENSRNOT00000066778 UCSC:RGD:1563853 ArrayExpress:D3ZL69
Uniprot:D3ZL69
Length = 255
Score = 371 (135.7 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 76/155 (49%), Positives = 104/155 (67%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDL-VVFLSLVERCWQDLCDQMLMIRGIALYLDRTY 63
LY+++ + CE+H+ A I + P L ++FL + CWQD C QM+MIR I L+LDRTY
Sbjct: 102 LYKQLRQVCEDHVQAQILPF-REYPFLALLFLQKINTCWQDHCRQMIMIRSIFLFLDRTY 160
Query: 64 VKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKM 123
V Q + S+WDMGL+LFR ++ S V+ KT+ G+L +I RER GEAVDR+LL LL M
Sbjct: 161 VLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSM 220
Query: 124 FTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSD 158
+ L +Y +SFE FLE T+ YAAEG + MQ +
Sbjct: 221 LSDLQVYKDSFELKFLEETNCLYAAEGQRLMQDRE 255
>CGD|CAL0005748 [details] [associations]
symbol:orf19.7497 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0005748 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
EMBL:AACQ01000039 RefSeq:XP_718654.1 ProteinModelPortal:Q5AAJ3
STRING:Q5AAJ3 GeneID:3639684 KEGG:cal:CaO19.7497 Uniprot:Q5AAJ3
Length = 859
Score = 178 (67.7 bits), Expect = 7.9e-33, Sum P(3) = 7.9e-33
Identities = 58/230 (25%), Positives = 102/230 (44%)
Query: 305 NRPAELIAKFLDEKLRAGNKGTSE---------EELEGTLDKVLVLFRFIQGKDVFEAFY 355
N P EL++ ++D ++ KG+S ++ E + + RFI+ KD FEA Y
Sbjct: 434 NAP-ELLSVYMDYFIKQLTKGSSSNKDISLKSGDQTEDLISNSIQFLRFIKDKDAFEANY 492
Query: 356 KKDLAKRLLLGK-----SASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF 410
AKR L K S++ D E+ +++KL E G+ +K+ M +D+ SK+ +
Sbjct: 493 ANHFAKRFLNSKTGNSPSSNKDIEEIILAKLSEEMGTSSLDKVIKMNRDVRSSKDTTNDW 552
Query: 411 KQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRL-------------PHELNVYQDIF 457
K+ ++K +EM + + WP D + P +L F
Sbjct: 553 KRYLNKQSKSTDLVEMELKICNVTDWPKSMTKDYKWFSRTENEETPFKWPRQLRNTIKQF 612
Query: 458 KEFYLS--KYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLF 505
EF+ + K + L W G L+ +P E+ +S F ++++LF
Sbjct: 613 DEFWSNGKKNDNKSLYWSPKFGSMDLRITYPSRTYEINLSTFAAIIMLLF 662
Score = 171 (65.3 bits), Expect = 7.9e-33, Sum P(3) = 7.9e-33
Identities = 36/91 (39%), Positives = 59/91 (64%)
Query: 574 AIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPA 633
++ E EE + + R+ +V+AAIVRI+K+R+ + H LI EL +QL +P+
Sbjct: 769 SVAKTEQEEELEEVNANIMEGRKIEVNAAIVRILKSRQSIKHNDLIEELLKQLSNRFQPS 828
Query: 634 DL--KKRIESLIDREYLERDKNNPQIYNYLA 662
+ K+RIE LID+EYL+RD ++ +Y+Y+A
Sbjct: 829 IILIKQRIEDLIDKEYLKRDTDDRNLYHYIA 859
Score = 161 (61.7 bits), Expect = 4.7e-25, Sum P(3) = 4.7e-25
Identities = 52/203 (25%), Positives = 100/203 (49%)
Query: 464 KYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLF---------------NDA 508
K + L W G L+ +P E+ +S F ++++LF ++
Sbjct: 621 KNDNKSLYWSPKFGSMDLRITYPSRTYEINLSTFAAIIMLLFAPQSTNADGSTVSAFDEM 680
Query: 509 QKLSFQDIKDATGIEDKELRRTLQSLACG-KVRVLQKLPKGRDVEDDDSFVFNEGFTAPL 567
++L++++I + TGI + EL+R LQS+A K R+L K+P +DV +D F N F +P
Sbjct: 681 KELTYEEILELTGIPEPELKRHLQSIAVAPKSRLLVKVPMSKDVNKNDVFKLNAKFKSPS 740
Query: 568 YRIKVNAIQMKETVEENTS------TTERVFQ-DRQYQVDAAIVRIMKTRKVLSHTLLIT 620
++KV + + ++S T + V + +++ +++ IM+ RK+ + ++
Sbjct: 741 VKVKVLTVSASSSSSASSSSSSSKNTNKSVAKTEQEEELEEVNANIMEGRKIEVNAAIVR 800
Query: 621 ELFQQLKFPIKPADLKKRIESLI 643
L + + IK DL IE L+
Sbjct: 801 IL--KSRQSIKHNDL---IEELL 818
Score = 145 (56.1 bits), Expect = 7.9e-33, Sum P(3) = 7.9e-33
Identities = 48/221 (21%), Positives = 98/221 (44%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
GG LY + + H+ L+ S + +F+ + + W + M I + +YL++
Sbjct: 76 GGKLYDNVANVIKTHLLTRREKLLSVSANHDLFMQSILQEWSEHLQAMKFISDVLMYLNK 135
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYS--EVEHKTVTGLLRMIERERLGEAVDRTL-LN 118
YV + + ++D+G+QLF+ Y+ Y+ EV K V ++ I + R G + ++ +
Sbjct: 136 VYVAEHKKLL-IYDLGIQLFKDYVIKYNNDEVGSKIVNMVIDEIAKSRTGVVITSSMYIT 194
Query: 119 HLLKMFTAL----G----IYSES-----FEKPFLECTSEFYAAEGMKYMQQSDVPDYLKH 165
++ M L G ++ +S FE FL+ + E +++ + YL+
Sbjct: 195 KIINMMELLVEPSGSSDILFGDSYYQIKFEPKFLKSSEESLYNLSQEFVSHNLGTKYLQL 254
Query: 166 VEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAIL 206
+ +E R YL ST L+ +++ I ++
Sbjct: 255 TTQFIKDEDNRVRFYLPPSTYPKLVELMNNIMIKDKIDKMI 295
Score = 114 (45.2 bits), Expect = 1.0e-25, Sum P(4) = 1.0e-25
Identities = 35/133 (26%), Positives = 61/133 (45%)
Query: 264 VSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQNR-PA-----ELIAKFLDE 317
+ ++L+++ L +W+ SF +N T A IN R PA EL++ ++D
Sbjct: 386 IETILKYRDQLMQVWKNSFDENLMIEQTFTFAMRDFINGSNKRGPASVNAPELLSVYMDY 445
Query: 318 KLRAGNKGTSE---------EELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKS 368
++ KG+S ++ E + + RFI+ KD FEA Y AKR L K+
Sbjct: 446 FIKQLTKGSSSNKDISLKSGDQTEDLISNSIQFLRFIKDKDAFEANYANHFAKRFLNSKT 505
Query: 369 ASIDAEKSMISKL 381
+ + I ++
Sbjct: 506 GNSPSSNKDIEEI 518
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 441 PMDVRLPHELNVYQDIF 457
P V P L+VY D F
Sbjct: 430 PASVNAPELLSVYMDYF 446
Score = 38 (18.4 bits), Expect = 1.0e-25, Sum P(4) = 1.0e-25
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 400 IELSKEINESFKQSSQARTKLPSGIEMSVHVLT 432
+ +SK++N++ A+ K PS + V VLT
Sbjct: 718 VPMSKDVNKNDVFKLNAKFKSPS---VKVKVLT 747
>UNIPROTKB|I3L5Y8 [details] [associations]
symbol:I3L5Y8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0006511 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:DECMLRE Ensembl:ENSSSCT00000029748
Uniprot:I3L5Y8
Length = 225
Score = 335 (123.0 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 73/196 (37%), Positives = 115/196 (58%)
Query: 34 FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-E 92
FL + + W D M+MIR I +Y+DR YV+Q NV +++++GL +FR + Y + +
Sbjct: 29 FLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQN-NVENVYNLGLIIFRDQVVRYGCIRD 87
Query: 93 HKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-----IYSESFEKPFLECTSEFYA 147
H T LL MI RER GE VDR + + +M LG +Y E FE PFLE ++EF+
Sbjct: 88 HLRQT-LLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQ 146
Query: 148 AEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILD 207
E K++ ++ Y+K VE R++EE ER + LD ST +P++ ER+L+ +H+ I++
Sbjct: 147 MESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVE 206
Query: 208 ---KGFTMLMDGHRTE 220
G ++ +TE
Sbjct: 207 MENSGLVHMLKNGKTE 222
>WB|WBGene00000840 [details] [associations]
symbol:cul-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051729
"germline cell cycle switching, mitotic to meiotic cell cycle"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0006468 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051729 GO:GO:0006974 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:Z70783 PIR:T28043 RefSeq:NP_505616.2 ProteinModelPortal:Q23639
SMR:Q23639 DIP:DIP-25847N IntAct:Q23639 MINT:MINT-1126406
STRING:Q23639 PaxDb:Q23639 EnsemblMetazoa:ZK856.1 GeneID:179413
KEGG:cel:CELE_ZK856.1 UCSC:ZK856.1 CTD:43434 WormBase:ZK856.1
HOGENOM:HOG000007610 InParanoid:Q23639 KO:K10612 OMA:EVTTFQM
NextBio:905286 Uniprot:Q23639
Length = 765
Score = 342 (125.4 bits), Expect = 7.6e-28, P = 7.6e-28
Identities = 136/444 (30%), Positives = 225/444 (50%)
Query: 152 KYMQQSDVPDYLKHVE---IRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAI--L 206
+Y++ + P KH+E I L E E +L + LIA+ + + L+R I
Sbjct: 232 RYLEMNS-PTSGKHMEKAVIALVESFEDTIL----AECSKLIASKDVERLQRLYRLIRRT 286
Query: 207 DKGF-TML--MDGH-RTEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKD 262
G T+L +D H RTE L M R NA E+L Y+++ +++ +K
Sbjct: 287 RSGIDTVLKCIDTHIRTEGLNDM-----RNNA-ENLSTDPERYVQQ----LLLMFDKFSS 336
Query: 263 MVSSLLEFKASLDTIWEQSFSK--NEA--FCNTIKDAFEYLINLRQNRPAELIAKFLDEK 318
+V A L T +++F N++ F + + +++ +++ AEL+A + D
Sbjct: 337 LVREGFCDDARLLTARDKAFRAVVNDSSIFKTEMMNKKGRTLSV-ESKCAELLANYCDLL 395
Query: 319 LRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKS 376
LR +K + EE++ L++VL++ ++++ KDVF F++ L++RL+L SA + E+
Sbjct: 396 LRKTQLSKKLTSEEIDEKLNQVLLVLKYVENKDVFMRFHRAHLSRRLILEMSADQEKEEM 455
Query: 377 MISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIE-MSVHVLTT 433
M++KL+ ECG S NKL M +DIEL+K++N SFK++ S + +++ VL
Sbjct: 456 MVTKLR-ECGMPSDAVNKLSRMLQDIELNKDMNSSFKKALTGTNNNKSIADSINMKVLNG 514
Query: 434 GYWPTYPPMDVR--LPHELNVYQDIFKEFYLSKYSGRRLMWQN--SLGHCVLKAEFPKGK 489
G W +R LP EL + + FY +++GR+L W + S G V G+
Sbjct: 515 GAWGRGGSERIRFSLPRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTMVFGTA-NGGR 573
Query: 490 KELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSL-ACGKVR---VLQ 543
+L + FQ VL FND K+S + ++ AT + D EL RTL SL A K+R +L
Sbjct: 574 FDLECTTFQMAVLFCFNDRAHDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLC 633
Query: 544 KLPK----GRDVEDDDSFVFNEGF 563
+P RD D F+ N F
Sbjct: 634 DVPSTTVTARDFTDSTKFLINHDF 657
Score = 154 (59.3 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 71/301 (23%), Positives = 135/301 (44%)
Query: 21 IRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQL 80
IRSL L+ ++ R +Q L + I R V +TP S+ + L+
Sbjct: 68 IRSLQTDGSLLIGYIKEWNRFYQQANILPLPFKKIDESSRRRSVPETPE-ESIRTVMLEK 126
Query: 81 FRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG---------IYS 131
+ + + + + + + LR+++ ER G +D + + + F AL +Y
Sbjct: 127 WNEII--FMNISEQLLVEALRLVKEERDGNIIDAQNVIGIRESFVALNDRAGEDPLLVYR 184
Query: 132 ESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVS--TRKPL 189
+SFE+ F+E T+E+Y + + V +Y+ + + +L EE +R YL+++ T
Sbjct: 185 QSFERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSPTSGKH 244
Query: 190 IATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRVNA-LESLRQALAMYIRR 248
+ A L+E IL + + L+ E LQR+Y L R + ++++ + + +IR
Sbjct: 245 MEKAVIALVESFEDTILAE-CSKLIASKDVERLQRLYRLIRRTRSGIDTVLKCIDTHIRT 303
Query: 249 TGHGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSK--NEAFCN-----TIKD-AFEYLI 300
G + D + + +S+ E + FS E FC+ T +D AF ++
Sbjct: 304 EG---LNDMRNNAENLSTDPERYVQQLLLMFDKFSSLVREGFCDDARLLTARDKAFRAVV 360
Query: 301 N 301
N
Sbjct: 361 N 361
Score = 150 (57.9 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 54/170 (31%), Positives = 87/170 (51%)
Query: 510 KLSFQDIKDATGIEDKELRRTLQSL-ACGKVR---VLQKLPK----GRDVEDDDSFVFNE 561
K+S + ++ AT + D EL RTL SL A K+R +L +P RD D F+ N
Sbjct: 596 KISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARDFTDSTKFLINH 655
Query: 562 GFTA-----PLYRIKVNAI-QMKETVEENTSTT-ERVFQDRQYQVDAAIVRIMKTRKVLS 614
F R KVN I +++ ++E N E + R+ +V IV+I+KTRK +
Sbjct: 656 DFNVVKNGKSQQRGKVNLIGRLQLSLEANAEKEHESIVALRELRVQEGIVKILKTRKTYT 715
Query: 615 HTLLITELFQQLK--FPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
L EL + LK F +K++I+ LI+ +Y+ER ++ + Y++
Sbjct: 716 LAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRADDINTFVYIS 765
>GENEDB_PFALCIPARUM|PFF1445c [details] [associations]
symbol:PFF1445c "cullin-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0051726 "regulation of
cell cycle" evidence=ISS] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 GO:GO:0000082 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL844505
RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3 PRIDE:C6KTD3
EnsemblProtists:PFF1445c:mRNA GeneID:3885751 KEGG:pfa:PFF1445c
EuPathDB:PlasmoDB:PF3D7_0629800 HOGENOM:HOG000281645
ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 170 (64.9 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 44/157 (28%), Positives = 79/157 (50%)
Query: 338 VLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMF 397
+L LFR++ K+ FE +Y+ + KRL+ S +I + + LK ECG+QFT K+E +
Sbjct: 704 ILSLFRYVSDKEKFEKYYRTYMCKRLINDSSFNIILDVKVFKTLKKECGAQFTKKIEIIL 763
Query: 398 KDIEL-SKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQD 455
KD++ SK + + +K+ + +V+++ W +V P + + +
Sbjct: 764 KDMKFTSKTLMKFYKELPNNVNHFLKRKKYAVNIIFNESWEYVNTENNVIYPPMIKMCNE 823
Query: 456 IFKEFYLSKYS-GRRLMWQNSLGHCVLKAEFPKGKKE 491
F FY KY+ + + + LG C L+ F K+E
Sbjct: 824 AFFLFY-QKYNKSKNIKFLPLLGLCTLRVHFKNFKEE 859
Score = 151 (58.2 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 51/180 (28%), Positives = 89/180 (49%)
Query: 487 KGKKEL--AVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSL-ACGKVRVLQ 543
KGKK++ V++ Q +VL+LFN + +IK+ TGI + + R L+++ G+ +L
Sbjct: 957 KGKKKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTIYTIGETHILI 1016
Query: 544 KLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTS--TTERVFQDRQYQVDA 601
++ + SF + F Y N + K+ + TS + +D+ +DA
Sbjct: 1017 YDKANEILKLNFSFRSKKKFLIVNY----NDVLYKDDMGPTTSLLNEDNEIEDKTLHIDA 1072
Query: 602 AIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD-LKKRIESLIDREYLERDKNNPQIYNY 660
AIV+ +KT S + + F + K I + +K RI SL+ RE++ NN Y+Y
Sbjct: 1073 AIVKFLKTNGKSSERKICS--FIKDKMDISSNEQIKNRISSLLSREFIFFKNNN---YHY 1127
Score = 75 (31.5 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 41/205 (20%), Positives = 85/205 (41%)
Query: 112 VDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKH------ 165
++ +L+ +K+ L +Y + FE+ + T FY + KY + + Y +
Sbjct: 315 INDKVLSLSIKISDILNLYDD-FERIYKNETYTFYKEKIEKYKKDMETLGYEECNFDFPI 373
Query: 166 -VEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAIL-DKGFTMLMDGHRTEDLQ 223
VE L E R +L T ++ + LL ++ + D + + + L+
Sbjct: 374 IVENYLCHEQIRSRKFLKEHTEITILNMLKDLLLVKNRDVLFKDSYIKYCIIKEKYDPLR 433
Query: 224 RMYSLFSRVNALESLRQALAMYIRRTGHGIVMD---EEKDKDMVSS----LLEFKASLDT 276
+Y ++ LE+ + G +V D + + ++++ L+ FK ++D
Sbjct: 434 SVYLYSLNLDDLENFSNIFFNVVDNIGTELVNDVINKRNNSSLLNNAIIKLINFKLNVDR 493
Query: 277 IWEQSFSKNEAFCNTIKDAFEYLIN 301
I SF + F ++ FE+ IN
Sbjct: 494 IIIMSFRYSSYFMKKWREVFEHFIN 518
Score = 37 (18.1 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 20/111 (18%), Positives = 49/111 (44%)
Query: 9 IEKECEE-------HISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
IEKEC E + I++ ++ + FL L W + ++ I I +
Sbjct: 80 IEKECNEKTKQFFEEVEIRIKNEEFKNGE-EEFLKLFVSIWNNFSLVLIHISDIL----Q 134
Query: 62 TYVKQTPNVRSLWDMGLQLF----RKYLSSYSEVEHKTVTGLLRMIERERL 108
+++ T N+ + Q+F +KY++ Y +++ ++ + + +++
Sbjct: 135 SFIAYTKNMCCNFFDPTQIFNYLWKKYINQYVIIKNMFISSICNYLTYDKI 185
>UNIPROTKB|C6KTD3 [details] [associations]
symbol:PFF1445c "Cullin-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AL844505 RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3
PRIDE:C6KTD3 EnsemblProtists:PFF1445c:mRNA GeneID:3885751
KEGG:pfa:PFF1445c EuPathDB:PlasmoDB:PF3D7_0629800
HOGENOM:HOG000281645 ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 170 (64.9 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 44/157 (28%), Positives = 79/157 (50%)
Query: 338 VLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMF 397
+L LFR++ K+ FE +Y+ + KRL+ S +I + + LK ECG+QFT K+E +
Sbjct: 704 ILSLFRYVSDKEKFEKYYRTYMCKRLINDSSFNIILDVKVFKTLKKECGAQFTKKIEIIL 763
Query: 398 KDIEL-SKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWP-TYPPMDVRLPHELNVYQD 455
KD++ SK + + +K+ + +V+++ W +V P + + +
Sbjct: 764 KDMKFTSKTLMKFYKELPNNVNHFLKRKKYAVNIIFNESWEYVNTENNVIYPPMIKMCNE 823
Query: 456 IFKEFYLSKYS-GRRLMWQNSLGHCVLKAEFPKGKKE 491
F FY KY+ + + + LG C L+ F K+E
Sbjct: 824 AFFLFY-QKYNKSKNIKFLPLLGLCTLRVHFKNFKEE 859
Score = 151 (58.2 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 51/180 (28%), Positives = 89/180 (49%)
Query: 487 KGKKEL--AVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSL-ACGKVRVLQ 543
KGKK++ V++ Q +VL+LFN + +IK+ TGI + + R L+++ G+ +L
Sbjct: 957 KGKKKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTIYTIGETHILI 1016
Query: 544 KLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTS--TTERVFQDRQYQVDA 601
++ + SF + F Y N + K+ + TS + +D+ +DA
Sbjct: 1017 YDKANEILKLNFSFRSKKKFLIVNY----NDVLYKDDMGPTTSLLNEDNEIEDKTLHIDA 1072
Query: 602 AIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD-LKKRIESLIDREYLERDKNNPQIYNY 660
AIV+ +KT S + + F + K I + +K RI SL+ RE++ NN Y+Y
Sbjct: 1073 AIVKFLKTNGKSSERKICS--FIKDKMDISSNEQIKNRISSLLSREFIFFKNNN---YHY 1127
Score = 75 (31.5 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 41/205 (20%), Positives = 85/205 (41%)
Query: 112 VDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKH------ 165
++ +L+ +K+ L +Y + FE+ + T FY + KY + + Y +
Sbjct: 315 INDKVLSLSIKISDILNLYDD-FERIYKNETYTFYKEKIEKYKKDMETLGYEECNFDFPI 373
Query: 166 -VEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAIL-DKGFTMLMDGHRTEDLQ 223
VE L E R +L T ++ + LL ++ + D + + + L+
Sbjct: 374 IVENYLCHEQIRSRKFLKEHTEITILNMLKDLLLVKNRDVLFKDSYIKYCIIKEKYDPLR 433
Query: 224 RMYSLFSRVNALESLRQALAMYIRRTGHGIVMD---EEKDKDMVSS----LLEFKASLDT 276
+Y ++ LE+ + G +V D + + ++++ L+ FK ++D
Sbjct: 434 SVYLYSLNLDDLENFSNIFFNVVDNIGTELVNDVINKRNNSSLLNNAIIKLINFKLNVDR 493
Query: 277 IWEQSFSKNEAFCNTIKDAFEYLIN 301
I SF + F ++ FE+ IN
Sbjct: 494 IIIMSFRYSSYFMKKWREVFEHFIN 518
Score = 37 (18.1 bits), Expect = 1.5e-21, Sum P(4) = 1.5e-21
Identities = 20/111 (18%), Positives = 49/111 (44%)
Query: 9 IEKECEE-------HISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
IEKEC E + I++ ++ + FL L W + ++ I I +
Sbjct: 80 IEKECNEKTKQFFEEVEIRIKNEEFKNGE-EEFLKLFVSIWNNFSLVLIHISDIL----Q 134
Query: 62 TYVKQTPNVRSLWDMGLQLF----RKYLSSYSEVEHKTVTGLLRMIERERL 108
+++ T N+ + Q+F +KY++ Y +++ ++ + + +++
Sbjct: 135 SFIAYTKNMCCNFFDPTQIFNYLWKKYINQYVIIKNMFISSICNYLTYDKI 185
>TAIR|locus:2102772 [details] [associations]
symbol:AT3G46910 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006511 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL096859 IPI:IPI00518982
PIR:T12957 RefSeq:NP_190275.1 UniGene:At.53807
ProteinModelPortal:Q9STG3 SMR:Q9STG3 PaxDb:Q9STG3 PRIDE:Q9STG3
DNASU:823844 EnsemblPlants:AT3G46910.1 GeneID:823844
KEGG:ath:AT3G46910 TAIR:At3g46910 eggNOG:NOG292258 KO:K10609
OMA:MENCCLE PhylomeDB:Q9STG3 Genevestigator:Q9STG3 Uniprot:Q9STG3
Length = 247
Score = 259 (96.2 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 70/183 (38%), Positives = 103/183 (56%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQ-SPDLVVFLSLVERCWQDLCDQMLMIRGIALYLD 60
G LY+ I +ECE +ISAAI+SL Q D +FLSL+E+CW D ++ + IA
Sbjct: 67 GEALYKLILEECEIYISAAIQSLESQCDTDPSLFLSLLEKCWLDFRRKLQFLCSIA---- 122
Query: 61 RTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLL--- 117
QT S+WD+G +L K+L S +V K ++ +L++I +R +VD T L
Sbjct: 123 -GGEGQTVGPHSVWDLGSELSPKHLFSAQKVRDKLLSIILQLIRDQRSFMSVDMTQLKNT 181
Query: 118 ------------NHLLKMFTALGIY-SESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLK 164
N+L +F +Y S F+KPF++C EFY+AE M++ +QSD+P YLK
Sbjct: 182 TRPVMSVHMTQLNNLRGLFYGQSLYKSPFFKKPFIDCAVEFYSAEAMQFKEQSDIPLYLK 241
Query: 165 HVE 167
VE
Sbjct: 242 RVE 244
>FB|FBgn0036332 [details] [associations]
symbol:CG11261 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00884 EMBL:AE014296 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HSSP:Q9JLV5 EMBL:AY069566 RefSeq:NP_648620.1 UniGene:Dm.950
SMR:Q9VU33 EnsemblMetazoa:FBtr0075899 GeneID:39474
KEGG:dme:Dmel_CG11261 UCSC:CG11261-RA FlyBase:FBgn0036332
InParanoid:Q9VU33 OMA:IVRIMER OrthoDB:EOG4DZ09D GenomeRNAi:39474
NextBio:813830 Uniprot:Q9VU33
Length = 670
Score = 266 (98.7 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 97/361 (26%), Positives = 170/361 (47%)
Query: 307 PAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLG 366
P L+ + +E + + SEE + L +++ F+ + F Y K L R +
Sbjct: 327 PTRLLVTYANELMT--KRQESEEAIIDELKRIVKCVEFLSDEYKFIDMYLKALRIRQINE 384
Query: 367 KSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEM 426
S S E M S L + + T + +D++ + + + F+ ++ + G +
Sbjct: 385 TSTSDGVESIMYSLLNKKMANFVTRCIYVQLRDVDKLRTLKKEFQDHLNSKG-IKLGFDF 443
Query: 427 SVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQ--NSLGHCVLKAE 484
++ ++ LP EL F+ FY ++ + + Q N L +
Sbjct: 444 RPKCFKND--GSFENFNLTLPDELQQAWKEFRIFYEARKLQSKAIIQLNNELSSGEITCH 501
Query: 485 FPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQK 544
+ L VS Q VLMLFN ++ + Q++ A G+E + L+ L+ + K V +
Sbjct: 502 LNQSVYILEVSTLQMAVLMLFNRHERFTEQELVTALGVELETLQEALKQI---KFLVYIE 558
Query: 545 LPKGRDVEDDDSFVFNEGFTAPLYRIKVNA-IQMK-ETVEENTSTTERVFQDRQYQVDAA 602
+ K +E N FT R+ N + K +EE + ++ +D+Q VDAA
Sbjct: 559 VNKVNYIE------INMDFTNRKRRLFCNEPLPRKMRKIEEKSEIELKIRRDKQ--VDAA 610
Query: 603 IVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNY 660
IVRIMK +K L ++ LI+ ++++LK +KP + +KKR++ L++REYLERD N IY Y
Sbjct: 611 IVRIMKGQKQLEYSELISLVYEELKDRVKPQVSFIKKRLDYLVEREYLERD-NYYNIYRY 669
Query: 661 L 661
L
Sbjct: 670 L 670
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 224 (83.9 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 68/275 (24%), Positives = 129/275 (46%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYV 64
LY++ K E++ + + + D + LV+R W + + + +Y+DR V
Sbjct: 66 LYEKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKR-WNNHKIMVKWLSKFFVYIDRHLV 124
Query: 65 KQTP-NVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKM 123
+++ + SL ++GL F + Y E++ ++ +I +ER GE +DR L+ ++L +
Sbjct: 125 RRSKIPIPSLDEVGLTCFLDLV--YCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDI 182
Query: 124 FTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCL 178
+ G+ Y E FE L+ T+ +Y+ + ++ ++ PDY+ VE L E ER
Sbjct: 183 YVENGMGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERERVT 242
Query: 179 LYLDVSTRKPLIATAERQLLERHISAILDK---GFTMLMDGHRTEDLQRMYSLFSRV-NA 234
YL T L+ + +LL L+ GF+ L+ + DL R+Y L+ +
Sbjct: 243 HYLHSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLSRIYRLYLPIPKR 302
Query: 235 LESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLE 269
L + +I G+ ++ + DK L+E
Sbjct: 303 LGRVADLFKKHITEEGNALIKQAD-DKTTNQLLIE 336
>TAIR|locus:2025941 [details] [associations]
symbol:AT1G59800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00546899 PIR:A96622 RefSeq:NP_176189.1
UniGene:At.52274 ProteinModelPortal:Q9XIE8 SMR:Q9XIE8
EnsemblPlants:AT1G59800.1 GeneID:842273 KEGG:ath:AT1G59800
TAIR:At1g59800 eggNOG:NOG310081 InParanoid:Q9XIE8 OMA:DECMLRE
PhylomeDB:Q9XIE8 ProtClustDB:CLSN2913533 Genevestigator:Q9XIE8
Uniprot:Q9XIE8
Length = 255
Score = 170 (64.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 49/193 (25%), Positives = 94/193 (48%)
Query: 5 LYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIA---LYLDR 61
LY + + E + + + + D + L +R W L++R + +YLD
Sbjct: 59 LYDKYRELIENYAIQTVLPSLREKHDECMLRELAKR-WNA---HKLLVRLFSRRLVYLDD 114
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLL 121
+++ + + SL ++GL FR + Y E++ +L +I +ER GE +DR L+ +++
Sbjct: 115 SFLSKK-GLPSLREVGLNCFRDQV--YREMQSMAAEAILALIHKEREGEQIDRELVRNVI 171
Query: 122 KMFTALGI-----YSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHER 176
+F G+ Y E FE+ L+ T+ +Y+++ +++Q+ DY + L E ER
Sbjct: 172 DVFVENGMGTLKKYEEDFERLMLQDTASYYSSKASRWIQEESCLDYTLKPQQCLQRERER 231
Query: 177 CLLYLDVSTRKPL 189
YL +T L
Sbjct: 232 VTHYLHPTTEPKL 244
>TAIR|locus:2049173 [details] [associations]
symbol:APC2 "AT2G04660" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0007276 "gamete
generation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0032875 "regulation
of DNA endoreduplication" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0051301 GO:GO:0007067 GO:GO:0005819
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0009561 eggNOG:COG5647 KO:K03349 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632 EMBL:AC006955
EMBL:AK118453 EMBL:AY138228 IPI:IPI00520644 PIR:H84459
RefSeq:NP_178543.2 UniGene:At.41283 ProteinModelPortal:Q8H1U5
SMR:Q8H1U5 IntAct:Q8H1U5 STRING:Q8H1U5 PaxDb:Q8H1U5 PRIDE:Q8H1U5
EnsemblPlants:AT2G04660.1 GeneID:815008 KEGG:ath:AT2G04660
TAIR:At2g04660 HOGENOM:HOG000265303 InParanoid:Q8H1U5 OMA:RIHNTLK
PhylomeDB:Q8H1U5 ProtClustDB:CLSN2690638 Genevestigator:Q8H1U5
GO:GO:0031461 Uniprot:Q8H1U5
Length = 865
Score = 178 (67.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 335 LDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLE 394
+D + +L I K+ Y+ LA++LL ID E + LK G + E
Sbjct: 537 VDILGMLVDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELLKIHFGEASMQRCE 596
Query: 395 GMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLT-----TGYWPTYPPMDVRLPHE 449
M D+ SK +N + K++SQ +L E+SV LT T +WP + LP
Sbjct: 597 IMLNDLIDSKRVNTNIKKASQTGAELREN-ELSVDTLTSTILSTNFWPPIQDEPLELPGP 655
Query: 450 LNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQ 509
++ + Y + R+L+W+ +LG L+ +F + VS ++M F + +
Sbjct: 656 VDKLLSDYANRYHEIKTPRKLLWKKNLGTVKLELQFEDRAMQFTVSPTHAAIIMQFQEKK 715
Query: 510 KLSFQDIKDATGIEDKELRR 529
+++D+ + GI L R
Sbjct: 716 SWTYKDLAEVIGIPIDALNR 735
>RGD|1305546 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005680
"anaphase-promoting complex" evidence=ISO] [GO:0031915 "positive
regulation of synaptic plasticity" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=IMP]
[GO:0070979 "protein K11-linked ubiquitination" evidence=ISO]
[GO:0090129 "positive regulation of synapse maturation"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 RGD:1305546 GO:GO:0005634
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773
GO:GO:0006511 GO:GO:0005680 HOVERGEN:HBG045327 GO:GO:0090129
GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 EMBL:BC107471 IPI:IPI00373399
UniGene:Rn.20099 STRING:Q3B7T7 PhosphoSite:Q3B7T7 UCSC:RGD:1305546
InParanoid:Q3B7T7 ArrayExpress:Q3B7T7 Genevestigator:Q3B7T7
Uniprot:Q3B7T7
Length = 539
Score = 172 (65.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 57/217 (26%), Positives = 101/217 (46%)
Query: 336 DKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEG 395
D + +L KD+F Y+ LA RLL S S + E + LK G + E
Sbjct: 217 DIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEV 276
Query: 396 MFKDIELSKEINESFKQSSQART---KLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNV 452
M KD+ S+ IN + ++ + R + P G+ +V +L++ +WP + + +P ++
Sbjct: 277 MLKDMADSRRINANIREEDEKRPVEEQPPFGV-YAV-ILSSEFWPPFKDEKLEVPEDIRA 334
Query: 453 YQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLS 512
D++ + Y + R L W+++LG + E +AV+ Q VVL+ F D +
Sbjct: 335 ALDVYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQDQASWT 394
Query: 513 FQDIKDATGIEDKELRRTLQS-LACGKVRVLQKLPKG 548
+++ + LRR + L G VL++ P G
Sbjct: 395 LEELSKVVKMPVALLRRRMSVWLQQG---VLREEPPG 428
>UNIPROTKB|Q9UJX6 [details] [associations]
symbol:ANAPC2 "Anaphase-promoting complex subunit 2"
species:9606 "Homo sapiens" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=IDA] [GO:0005680 "anaphase-promoting complex"
evidence=IDA] [GO:0090129 "positive regulation of synapse
maturation" evidence=ISS] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=TAS] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0000079 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007067 GO:GO:0007094
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0051436
GO:GO:0045773 GO:GO:0004842 GO:GO:0005680 EMBL:AF191337
EMBL:AL929554 EMBL:BC032503 EMBL:BC001579 EMBL:BC009487
EMBL:AB037827 IPI:IPI00002549 IPI:IPI00375832 RefSeq:NP_037498.1
UniGene:Hs.533262 ProteinModelPortal:Q9UJX6 SMR:Q9UJX6
DIP:DIP-32957N IntAct:Q9UJX6 MINT:MINT-1196367 STRING:Q9UJX6
PhosphoSite:Q9UJX6 DMDM:37537863 PaxDb:Q9UJX6 PRIDE:Q9UJX6
DNASU:29882 Ensembl:ENST00000323927 GeneID:29882 KEGG:hsa:29882
UCSC:uc004clq.1 UCSC:uc004clr.1 CTD:29882 GeneCards:GC09M140069
HGNC:HGNC:19989 HPA:CAB018692 MIM:606946 neXtProt:NX_Q9UJX6
PharmGKB:PA134884359 eggNOG:COG5647 HOGENOM:HOG000033936
HOVERGEN:HBG045327 InParanoid:Q9UJX6 KO:K03349 OMA:MLRGVLF
OrthoDB:EOG4T1HM4 PhylomeDB:Q9UJX6 Reactome:REACT_8017
GenomeRNAi:29882 NextBio:52411 ArrayExpress:Q9UJX6 Bgee:Q9UJX6
CleanEx:HS_ANAPC2 CleanEx:HS_APC2 Genevestigator:Q9UJX6
GermOnline:ENSG00000176248 GO:GO:0031145 GO:GO:0008054
GO:GO:0090129 GO:GO:0031915 GO:GO:0051437 GO:GO:0070979
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
Uniprot:Q9UJX6
Length = 822
Score = 167 (63.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 56/217 (25%), Positives = 101/217 (46%)
Query: 336 DKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEG 395
D + +L KD+F Y+ LA RLL S S + E + LK G + E
Sbjct: 500 DIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEV 559
Query: 396 MFKDIELSKEINESFKQSSQART---KLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNV 452
M KD+ S+ IN + ++ + R + P G+ +V +L++ +WP + + +P ++
Sbjct: 560 MLKDMADSRRINANIREEDEKRPAEEQPPFGV-YAV-ILSSEFWPPFKDEKLEVPEDIRA 617
Query: 453 YQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLS 512
+ + + Y + R L W+++LG + E +AV+ Q V+L+ F D +
Sbjct: 618 ALEAYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVILLYFQDQASWT 677
Query: 513 FQDIKDATGIEDKELRRTLQS-LACGKVRVLQKLPKG 548
+++ A + LRR + L G VL++ P G
Sbjct: 678 LEELSKAVKMPVALLRRRMSVWLQQG---VLREEPPG 711
Score = 50 (22.7 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 166 VEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRT--EDLQ 223
+E RL + + R L L+ TR L+ Q L + +L +G + RT E +Q
Sbjct: 118 LESRL-DPYLRSLELLEKWTRLGLLMGTGAQGLREEVHTML-RG-VLFFSTPRTFQEMIQ 174
Query: 224 RMYSLFSRVNALESLRQ 240
R+Y F RV ++S R+
Sbjct: 175 RLYGCFLRVY-MQSKRK 190
Score = 41 (19.5 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 314 FLDEKLRAGNKGTSEEELEGTLD 336
++ K R G GT + ELEG LD
Sbjct: 184 YMQSK-RKGEGGT-DPELEGELD 204
Score = 37 (18.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 85 LSSYSEVEHKTVTGLLRMIERERL 108
LS V + VT L + RER+
Sbjct: 250 LSLLERVSAEAVTTTLHQVTRERM 273
>MGI|MGI:2139135 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0005680 "anaphase-promoting complex" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0045773 "positive regulation of axon extension"
evidence=ISO] [GO:0050775 "positive regulation of dendrite
morphogenesis" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=ISO] [GO:0090129 "positive regulation of synapse
maturation" evidence=IDA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 UniPathway:UPA00143
MGI:MGI:2139135 GO:GO:0051301 GO:GO:0007067 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773 GO:GO:0006511
GO:GO:0005680 CTD:29882 eggNOG:COG5647 HOVERGEN:HBG045327 KO:K03349
OMA:MLRGVLF OrthoDB:EOG4T1HM4 GO:GO:0090129 GO:GO:0031915
GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 EMBL:AK033784 EMBL:AK170676 EMBL:AL732309
EMBL:BC027351 EMBL:BC137583 IPI:IPI00227654 RefSeq:NP_780509.2
UniGene:Mm.291624 ProteinModelPortal:Q8BZQ7 SMR:Q8BZQ7
STRING:Q8BZQ7 PhosphoSite:Q8BZQ7 PaxDb:Q8BZQ7 PRIDE:Q8BZQ7
Ensembl:ENSMUST00000028341 GeneID:99152 KEGG:mmu:99152
GeneTree:ENSGT00390000016127 InParanoid:Q3TCK5 NextBio:353811
Bgee:Q8BZQ7 CleanEx:MM_ANAPC2 Genevestigator:Q8BZQ7
GermOnline:ENSMUSG00000026965 Uniprot:Q8BZQ7
Length = 837
Score = 167 (63.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 56/217 (25%), Positives = 101/217 (46%)
Query: 336 DKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEG 395
D + +L KD+F Y+ LA RLL S S + E + LK G + E
Sbjct: 515 DIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEV 574
Query: 396 MFKDIELSKEINESFKQSSQART---KLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNV 452
M KD+ S+ IN + ++ + R + P G+ +V +L++ +WP + + +P ++
Sbjct: 575 MLKDMADSRRINANIREEDEKRPVEEQPPFGV-YAV-ILSSEFWPPFKDEKLEVPEDIRA 632
Query: 453 YQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLS 512
D++ + Y + R L W+++LG + E +AV+ Q VVL+ F + +
Sbjct: 633 ALDVYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQNQASWT 692
Query: 513 FQDIKDATGIEDKELRRTLQS-LACGKVRVLQKLPKG 548
+++ + LRR + L G VL++ P G
Sbjct: 693 LEELSKVVKMPVALLRRRMSVWLQQG---VLREEPPG 726
Score = 46 (21.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 166 VEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRT--EDLQ 223
+E RL + + L L+ TR L+ A Q L + +L +G + RT E +Q
Sbjct: 133 LESRL-DPYLHSLELLEKWTRLGLLMGAGAQGLREKVHTML-RG-VLFFSTPRTFQEMVQ 189
Query: 224 RMYSLFSRVNALESLRQ 240
R+Y F RV ++S R+
Sbjct: 190 RLYGRFLRVY-MQSKRK 205
Score = 42 (19.8 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 304 QNRPAELIAKFLDEKLRAGNKGT--SEEELEGTLD 336
Q L +FL +++ KG ++ ELEG LD
Sbjct: 185 QEMVQRLYGRFLRVYMQSKRKGEGGTDPELEGELD 219
>UNIPROTKB|F1PYP1 [details] [associations]
symbol:TMEM210 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 OMA:MLRGVLF
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00390000008939 EMBL:AAEX03006734
Ensembl:ENSCAFT00000030976 Uniprot:F1PYP1
Length = 885
Score = 165 (63.1 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 56/217 (25%), Positives = 101/217 (46%)
Query: 336 DKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEG 395
D + +L KD+F Y+ LA RLL S S + E + LK G + E
Sbjct: 496 DIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEV 555
Query: 396 MFKDIELSKEINESFKQSSQART---KLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNV 452
M KD+ S+ IN + ++ + R + P G+ +V +L++ +WP + + +P ++
Sbjct: 556 MLKDMADSRRINANIREEDEKRPAEEQPPFGV-YAV-ILSSEFWPPFKDEKLEVPEDIRE 613
Query: 453 YQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLS 512
+++ + Y + R L W+++LG + E +AV+ Q VVL+ F D +
Sbjct: 614 ALEVYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQDQATWT 673
Query: 513 FQDIKDATGIEDKELRRTLQS-LACGKVRVLQKLPKG 548
+++ + LRR + L G VL++ P G
Sbjct: 674 LEELSKVVKMPVALLRRRMSVWLQQG---VLREEPAG 707
Score = 46 (21.3 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 166 VEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDL-QR 224
+E RL + + R L L+ TR L+ A Q L + L +G +++ QR
Sbjct: 114 LESRL-DPYLRSLELLEKWTRLGLLMGAGAQGLREKVHTTL-RGVLFFSTPRMFQEMIQR 171
Query: 225 MYSLFSRVNALESLRQ 240
+Y F RV ++S R+
Sbjct: 172 LYGRFLRVY-MQSKRK 186
Score = 41 (19.5 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 314 FLDEKLRAGNKGTSEEELEGTLD 336
++ K R G GT + ELEG LD
Sbjct: 180 YMQSK-RKGEGGT-DPELEGELD 200
Score = 38 (18.4 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 84 YLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEK 136
YL S +E T GLL + L E V TL L F+ ++ E ++
Sbjct: 121 YLRSLELLEKWTRLGLLMGAGAQGLREKVHTTLRGVLF--FSTPRMFQEMIQR 171
Score = 37 (18.1 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 85 LSSYSEVEHKTVTGLLRMIERERL 108
LS V + VT L + RER+
Sbjct: 246 LSLLERVSAEAVTTTLHQVTRERM 269
>FB|FBgn0002791 [details] [associations]
symbol:mr "morula" species:7227 "Drosophila melanogaster"
[GO:0000090 "mitotic anaphase" evidence=NAS] [GO:0005680
"anaphase-promoting complex" evidence=NAS;TAS;IPI] [GO:0051726
"regulation of cell cycle" evidence=TAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0045886 "negative
regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IMP] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=ISS] [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 EMBL:AE013599 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0045886 GO:GO:0006511
GO:GO:0005680 KO:K03349 OMA:MLRGVLF InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GeneTree:ENSGT00390000016127
GO:GO:0050804 FlyBase:FBgn0002791 EMBL:AY129297 EMBL:BT031326
RefSeq:NP_611862.1 UniGene:Dm.759 SMR:Q9W1E5 IntAct:Q9W1E5
MINT:MINT-292405 STRING:Q9W1E5 EnsemblMetazoa:FBtr0072156
GeneID:45906 KEGG:dme:Dmel_CG3060 UCSC:CG3060-RA InParanoid:Q9W1E5
GenomeRNAi:45906 NextBio:838467 Uniprot:Q9W1E5
Length = 802
Score = 159 (61.0 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 48/186 (25%), Positives = 83/186 (44%)
Query: 348 KDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEIN 407
K++F Y+ +A RLL + + E + LK G + E M KD+ SK IN
Sbjct: 497 KELFMTEYRNLMADRLLAQLDFNSEKEIRNLELLKIRFGESLLHSCEVMLKDVTDSKRIN 556
Query: 408 ESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHEL-NVYQDIFKEFYLSKYS 466
S RT+ ++S +++ +WP++ ++LP E+ N ++ K + Y
Sbjct: 557 AHI-HSDGDRTENQL-FDISSLIVSAQFWPSFNKESLQLPEEIENEFKKYTKAY--EAYK 612
Query: 467 GRR-LMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDK 525
G R L W+ G ++ E E+ VS V++ F + + +D+ T +
Sbjct: 613 GNRTLNWRTVTGRVNIEIEIGDRTMEMVVSPILAVIIYHFQTKNEWTIEDLSSITKVPAS 672
Query: 526 ELRRTL 531
LRR L
Sbjct: 673 ALRRRL 678
>WB|WBGene00000143 [details] [associations]
symbol:apc-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 GO:GO:0009792 GO:GO:0007126 GO:GO:0006898
GO:GO:0051301 GO:GO:0007067 GO:GO:0040035 GO:GO:0040039
GO:GO:0006511 KO:K03349 InterPro:IPR014786 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:FO080533 PIR:S44845 PIR:S44846 RefSeq:NP_498762.2
ProteinModelPortal:P34514 SMR:P34514 IntAct:P34514
MINT:MINT-1054240 STRING:P34514 PaxDb:P34514 EnsemblMetazoa:K06H7.6
GeneID:176139 KEGG:cel:CELE_K06H7.6 UCSC:K06H7.6 CTD:176139
WormBase:K06H7.6 eggNOG:NOG306201 HOGENOM:HOG000022396
InParanoid:P34514 OMA:HEINAEL NextBio:891294 Uniprot:P34514
Length = 731
Score = 133 (51.9 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 44/193 (22%), Positives = 86/193 (44%)
Query: 348 KDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEIN 407
K++F Y+ LA+RL + + EK + LK E M +D+ S +I+
Sbjct: 412 KELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDVIHSLDID 471
Query: 408 ESFKQSSQART---KLPSGIEMSVHVLTTGYWPTYPP--MDVRLPHELNVYQDIFKEFYL 462
+ F+ S+ +P I +S ++++ YWP + +P L D+++E YL
Sbjct: 472 KKFEDMSERSAGNYDVPI-IPISACIISSHYWPKLETEKTEALMPQPLQAAMDVYQETYL 530
Query: 463 SKYSGRRLMWQNSLGHCV-LKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATG 521
R+L W S+G CV + + + + ++L LF + + + ++ + G
Sbjct: 531 DVKRDRKLEWLRSVG-CVEVSINIDGVEVDRTIPNMYALLLFLFLEKETWTTAEVVEKMG 589
Query: 522 IEDKELRRTLQSL 534
+ R+ L+ L
Sbjct: 590 MSVVVTRKRLEWL 602
Score = 74 (31.1 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 232 VNALESLRQALAMYIRRTGHGIVMDEEK--DKDMVSSLL-EFKASLDTIWEQSFSKNEAF 288
+NA + AL++YIR +VM E+ D ++ S+ E SL IW + +AF
Sbjct: 153 LNANRHMNAALSVYIRELAATLVMHEKAAFDNELRCSMFQEIMESL-RIWSDQVTMQDAF 211
Query: 289 ---CNTI-KDAFEYLI-NLRQNRPAELIAKF---LDEK---LRAGNKGTSEEELEGTLDK 337
+TI KD F+ L N + + KF + K LR N G + +D+
Sbjct: 212 HLISDTIYKDVFQMLSKNAYEMIAVDFPVKFRSLITMKYCLLRTNNHGRVDFT-NYLIDQ 270
Query: 338 V--LVLFRFIQGKDVFEAF 354
V +L + KD+ +A+
Sbjct: 271 VNTKLLVASVDTKDILKAY 289
>UNIPROTKB|P34514 [details] [associations]
symbol:apc-2 "Anaphase-promoting complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 GO:GO:0009792
GO:GO:0007126 GO:GO:0006898 GO:GO:0051301 GO:GO:0007067
GO:GO:0040035 GO:GO:0040039 GO:GO:0006511 KO:K03349
InterPro:IPR014786 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 GO:GO:0031461 EMBL:FO080533 PIR:S44845
PIR:S44846 RefSeq:NP_498762.2 ProteinModelPortal:P34514 SMR:P34514
IntAct:P34514 MINT:MINT-1054240 STRING:P34514 PaxDb:P34514
EnsemblMetazoa:K06H7.6 GeneID:176139 KEGG:cel:CELE_K06H7.6
UCSC:K06H7.6 CTD:176139 WormBase:K06H7.6 eggNOG:NOG306201
HOGENOM:HOG000022396 InParanoid:P34514 OMA:HEINAEL NextBio:891294
Uniprot:P34514
Length = 731
Score = 133 (51.9 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 44/193 (22%), Positives = 86/193 (44%)
Query: 348 KDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEIN 407
K++F Y+ LA+RL + + EK + LK E M +D+ S +I+
Sbjct: 412 KELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDVIHSLDID 471
Query: 408 ESFKQSSQART---KLPSGIEMSVHVLTTGYWPTYPP--MDVRLPHELNVYQDIFKEFYL 462
+ F+ S+ +P I +S ++++ YWP + +P L D+++E YL
Sbjct: 472 KKFEDMSERSAGNYDVPI-IPISACIISSHYWPKLETEKTEALMPQPLQAAMDVYQETYL 530
Query: 463 SKYSGRRLMWQNSLGHCV-LKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATG 521
R+L W S+G CV + + + + ++L LF + + + ++ + G
Sbjct: 531 DVKRDRKLEWLRSVG-CVEVSINIDGVEVDRTIPNMYALLLFLFLEKETWTTAEVVEKMG 589
Query: 522 IEDKELRRTLQSL 534
+ R+ L+ L
Sbjct: 590 MSVVVTRKRLEWL 602
Score = 74 (31.1 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 232 VNALESLRQALAMYIRRTGHGIVMDEEK--DKDMVSSLL-EFKASLDTIWEQSFSKNEAF 288
+NA + AL++YIR +VM E+ D ++ S+ E SL IW + +AF
Sbjct: 153 LNANRHMNAALSVYIRELAATLVMHEKAAFDNELRCSMFQEIMESL-RIWSDQVTMQDAF 211
Query: 289 ---CNTI-KDAFEYLI-NLRQNRPAELIAKF---LDEK---LRAGNKGTSEEELEGTLDK 337
+TI KD F+ L N + + KF + K LR N G + +D+
Sbjct: 212 HLISDTIYKDVFQMLSKNAYEMIAVDFPVKFRSLITMKYCLLRTNNHGRVDFT-NYLIDQ 270
Query: 338 V--LVLFRFIQGKDVFEAF 354
V +L + KD+ +A+
Sbjct: 271 VNTKLLVASVDTKDILKAY 289
>UNIPROTKB|F1NLT0 [details] [associations]
symbol:ANAPC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IEA] [GO:0090129 "positive regulation of
synapse maturation" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0005680
OMA:MLRGVLF GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 EMBL:AADN02026919 IPI:IPI00604035
Ensembl:ENSGALT00000014053 Uniprot:F1NLT0
Length = 820
Score = 134 (52.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 45/200 (22%), Positives = 82/200 (41%)
Query: 336 DKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEG 395
D + +L KD+F Y+ LA RLL + S + E + LK G + E
Sbjct: 498 DIISLLVSIYGSKDLFINEYRTLLADRLLHQFNYSAEREIRNVELLKLRFGEAQMHYCEV 557
Query: 396 MFKDIELSKEINESFKQSSQARTKLPSG----IEMSVHVLTTGYWPTYPPMDVRLPHELN 451
M KD+ S+ IN + + + KLP + +L++ +WP + LP ++
Sbjct: 558 MLKDMADSRRINANIRDEEE---KLPEEERPPFSLVAVILSSEFWPPLKEEKLELPEQVK 614
Query: 452 VYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKL 511
+ + + Y + R L W+ LG L E L+VS +++ F
Sbjct: 615 EAMEAYSKKYEKLKAMRTLNWKYHLGLVSLDVELADRTLSLSVSPVHAAIILHFQTKSTW 674
Query: 512 SFQDIKDATGIEDKELRRTL 531
+ ++ + + L+R +
Sbjct: 675 TLAELSEVLKVPVTSLKRKM 694
Score = 70 (29.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 26/73 (35%), Positives = 35/73 (47%)
Query: 84 YLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTS 143
YLSS +E T GLL LG +TL + MF A+ +S + KPF E
Sbjct: 123 YLSSMELLEGWTEAGLL-------LGTGA-QTLREKVYTMFKAILFFSTT--KPFQEMIQ 172
Query: 144 EFYAAEGMKYMQQ 156
+FY+ YM+Q
Sbjct: 173 QFYSRTFRIYMRQ 185
>UNIPROTKB|H7C1L6 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC073052
EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3 Ensembl:ENST00000436172
Uniprot:H7C1L6
Length = 192
Score = 134 (52.2 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 2 GGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDR 61
G LY + + EH+ +R V S + FL + + W D M+MIR I +Y+DR
Sbjct: 91 GEKLYTGLREVVTEHLINKVREDVLNSLNNN-FLQTLNQAWNDHQTAMVMIRDILMYMDR 149
Query: 62 TYVKQTPNVRSLWDMGLQLFRKYLSSYSEV-EHKTVTGLLRMIER 105
YV+Q NV +++++GL +FR + Y + +H T LL MI R
Sbjct: 150 VYVQQN-NVENVYNLGLIIFRDQVVRYGCIRDHLRQT-LLDMIAR 192
>UNIPROTKB|H0YCA0 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HGNC:HGNC:2556
EMBL:AP002433 EMBL:AP003307 Ensembl:ENST00000532782 Uniprot:H0YCA0
Length = 130
Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 86 SSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFT--------ALGIYSESFEKP 137
S +S ++++ ++++ ERLGEA D L+ + + + L IY ++FEK
Sbjct: 43 SIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKA 102
Query: 138 FLECTSEFYAAEGMKYMQQSDVPDYLKH 165
+L+ T FY + Y+QQ+ V +Y+K+
Sbjct: 103 YLDSTERFYRTQAPSYLQQNGVQNYMKY 130
>ZFIN|ZDB-GENE-081104-256 [details] [associations]
symbol:anapc2 "anaphase promoting complex subunit
2" species:7955 "Danio rerio" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 ZFIN:ZDB-GENE-081104-256
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 CTD:29882
eggNOG:COG5647 HOGENOM:HOG000033936 HOVERGEN:HBG045327 KO:K03349
OrthoDB:EOG4T1HM4 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:CU468929 IPI:IPI00920305 RefSeq:NP_001243675.1
UniGene:Dr.105374 Ensembl:ENSDART00000133722 GeneID:100318335
KEGG:dre:100318335 Uniprot:B8JLK0
Length = 802
Score = 142 (55.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 44/199 (22%), Positives = 85/199 (42%)
Query: 336 DKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEG 395
D + +L K++F YK LA RLL + + E + LK G + E
Sbjct: 477 DIISLLVSIYGSKEIFVNEYKTVLADRLLHQLNYNTAREIRNVELLKLRFGESHMHYCEV 536
Query: 396 MFKDIELSKEINESFKQSSQA--RTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVY 453
M KD+ S+ IN + + + + P+ + +S ++++ +WP + LP +
Sbjct: 537 MLKDVADSRRINSNIHEEERRLPAEEQPT-LPLSAMIISSEFWPQLKEEKMELPAVASKA 595
Query: 454 QDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFP-KGKKELAVSLFQTVVLMLFNDAQKLS 512
+ + + + R L W+ LG L E + +L VS +++ F D +
Sbjct: 596 MEDYTHRFEKLKAMRTLRWKPQLGSVTLDLELEDRTITDLTVSPIHAAIILHFQDKGTWT 655
Query: 513 FQDIKDATGIEDKELRRTL 531
+++ G+ + +RR L
Sbjct: 656 LEELSGVLGVPQEMVRRKL 674
>SGD|S000003583 [details] [associations]
symbol:RTT101 "Cullin subunit of a Roc1p-dependent E3
ubiquitin ligase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;IC] [GO:0007088 "regulation of mitosis"
evidence=IMP] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0070651 "nonfunctional rRNA decay" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0010526 "negative regulation of transposition, RNA-mediated"
evidence=IMP] [GO:0031297 "replication fork processing"
evidence=IMP] [GO:0035361 "Cul8-RING ubiquitin ligase complex"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00884 UniPathway:UPA00143 SGD:S000003583 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 EMBL:BK006943 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0004842 SUPFAM:SSF75632
GO:GO:0031297 GO:GO:0070651 EMBL:AY387707 EMBL:Z49322 PIR:S56819
RefSeq:NP_012488.3 RefSeq:NP_012491.3 ProteinModelPortal:P47050
SMR:P47050 DIP:DIP-2887N IntAct:P47050 MINT:MINT-496763
STRING:P47050 PaxDb:P47050 PeptideAtlas:P47050 PRIDE:P47050
EnsemblFungi:YJL047C GeneID:853400 GeneID:853406 KEGG:sce:YJL044C
KEGG:sce:YJL047C CYGD:YJL047c eggNOG:NOG291674 OrthoDB:EOG4G1QRX
NextBio:973891 Genevestigator:P47050 GermOnline:YJL047C
GO:GO:0035361 GO:GO:0010526 Uniprot:P47050
Length = 842
Score = 130 (50.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 55/208 (26%), Positives = 99/208 (47%)
Query: 471 MWQNSLGHCVLKAEF--PKGKKEL-AVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKEL 527
MW +L HC +++ + G + ++LFQT VL LFN++ L+ Q I + T + K+L
Sbjct: 649 MW--NLHHCEVESPYIIQDGTNLIFELTLFQTCVLTLFNESDHLTLQVISEQTKLAYKDL 706
Query: 528 RRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIK----------VNAIQM 577
L+S C ++L RD+ D+++ NE F + ++K ++Q
Sbjct: 707 ALVLKSF-CN-YKILT-----RDI--DNTYSINESFKPDMKKVKNGKLRVVLPRTASLQS 757
Query: 578 KETVEENTSTTERVFQDRQYQVD---AAIVRIMKT-RKVLSHTLLITELFQQLK-FPIKP 632
T E TS+ + Q+ + A I R +K+ R L + L + QQ+K F +
Sbjct: 758 SNTGGERTSSAHHEGSNSQWTQELLKACITRSVKSERNGLDYDHLFETVKQQIKGFSV-- 815
Query: 633 ADLKKRIESLIDREYLERDKNNPQIYNY 660
+ K + L+ +++ RD++ Y Y
Sbjct: 816 GEFKDALAKLLRDKFITRDESTAT-YKY 842
Score = 58 (25.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 347 GKDVF----EAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMF 397
GKD + E ++K + LL+ ++A +A K+M+SK K C + KL+ +
Sbjct: 335 GKDTYDEEKERYFKTETHFSLLMFRNA-FEA-KNMLSKFKEFCDDAVSEKLKAAY 387
Score = 43 (20.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 23/139 (16%), Positives = 58/139 (41%)
Query: 4 NLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTY 63
N+ + ++ C++ +S +++ G + D ER + ++ Q+ + + +Y D +
Sbjct: 366 NMLSKFKEFCDDAVSEKLKAAYGSNHD-------TERLFDEVV-QLANVDHLKIYSD-SI 416
Query: 64 VKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKM 123
N+ ++ + KY S+ + + + + + R+ + ++ L LK
Sbjct: 417 EYHLCNLLGSTSKAIEQYVKYFESHLFIIVRKIKTTKKDLPRDMKIKYLNENLPILRLK- 475
Query: 124 FTALGIYSESFEKPFLECT 142
F L + FE+ T
Sbjct: 476 FVNLPTFPNFFERSIFRKT 494
>ASPGD|ASPL0000051025 [details] [associations]
symbol:AN10258 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005680 "anaphase-promoting
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 EMBL:BN001307 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GO:GO:0031461
EnsemblFungi:CADANIAT00008784 OMA:TWQATVI Uniprot:C8VLZ0
Length = 918
Score = 139 (54.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 53/221 (23%), Positives = 88/221 (39%)
Query: 336 DKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEG 395
D + L K+ F + LA RLL K A + E S++ LK G E
Sbjct: 574 DVIGSLISIFDSKETFVRELRDMLADRLLQ-KRAEFEQEMSVLELLKLRFGDNALQACEV 632
Query: 396 MFKDIELSKEINESFKQSSQARTKLPSGIEMSVH--VLTTGYWPTYPPMDVRLPHELNVY 453
M +DI S+ + ++ ++ Q T +H +L+ +WP ++P E+
Sbjct: 633 MLRDIFDSRRV-DTVVRNDQGMTNSQDQETPELHAKILSHFFWPELKGHQFKVPSEITEL 691
Query: 454 QDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSF 513
Q + E + S R+L W N G ++ + VS +Q V+ FN S
Sbjct: 692 QQRYAEGFESLKQSRKLTWLNGFGQVTVELDLEDRVFVEEVSTWQATVIYAFNSGTAESE 751
Query: 514 QDIKDATGIEDK-ELRRTLQSLAC---GKVRVLQKLPKGRD 550
K + + ++ L AC R+L ++P RD
Sbjct: 752 SVSKTIPELSAQLDMSAALVRSACLFWVSRRILTEVPGQRD 792
Score = 47 (21.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 36 SLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHK- 94
SL + + L L+I GI+ +R + + +V DM ++ R+Y SY +
Sbjct: 232 SLSDLITRTLTKHTLVILGISSLKERADINEDASVD---DM--EVDRQYSMSYQDWRAAP 286
Query: 95 TVTGLLRMI-ERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPF 138
+V +M+ E E + R L LLK +GI E ++ F
Sbjct: 287 SVEFRSQMMTEFEDVQVTTARERLLSLLKNLQLVGIGGEKAQEAF 331
>CGD|CAL0005690 [details] [associations]
symbol:orf19.6821 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0010458 "exit from mitosis" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069
CGD:CAL0005690 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
KO:K03349 InterPro:IPR014786 Pfam:PF08672 SUPFAM:SSF75632
GO:GO:0031461 eggNOG:NOG306201 EMBL:AACQ01000029 EMBL:AACQ01000028
RefSeq:XP_719797.1 RefSeq:XP_719914.1 ProteinModelPortal:Q5ADM0
STRING:Q5ADM0 GeneID:3638545 GeneID:3638645 KEGG:cal:CaO19.14113
KEGG:cal:CaO19.6821 Uniprot:Q5ADM0
Length = 807
Score = 139 (54.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 82/338 (24%), Positives = 144/338 (42%)
Query: 336 DKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEG 395
D + L KD+F + + L+ K +++ +S ++ LK+ G Q L+
Sbjct: 477 DIIESLISIFDSKDIFIDEFTRLFGDSLIKLKDYNVEEIESNLNLLKSRFGKQNFATLDV 536
Query: 396 MFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTY------PPMDVRLPHE 449
M +DI+ S+ +N+ F ++++ + VL+ YW + + ++P E
Sbjct: 537 MIRDIKESEYLNDLFVRNTR-------NTNFNTSVLSHLYWSSILENINTDANNFKVPKE 589
Query: 450 L-NVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPK-GKKELAVSLFQTVVLMLFND 507
+ + +Q +F KY GR L SLG L+ EF K G + V+ + ++ LFN+
Sbjct: 590 IEDKFQSFKDKFAQEKY-GRTLELLPSLGLVTLQLEFKKSGPRVFKVTPDKASIISLFNE 648
Query: 508 AQ-KLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRD-VEDDDSFVFNEGFTA 565
+ +LS I + + + L K VL +L K V DDD EG
Sbjct: 649 KEDELSVSYIAQTLNMSEYMVSNGLAYWV--KEGVLTELTKTLYIVNDDDDEEEEEGNVF 706
Query: 566 PLYRIKVNAIQMKETVEENTSTTERV---FQDRQYQV---DAAIVRIMKTRKVLSHTLLI 619
P A K ++ TS V +D+ ++ ++ IV I++ ++ +
Sbjct: 707 P-----EKAESSKHGIDSATSNLTSVKSGMEDKFSEIAIIESYIVTILQNITSINFERMK 761
Query: 620 TELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQI 657
T L L P D ESL++ EYL+ N +I
Sbjct: 762 TLL--NLMVPKDKLDFANVSESLLE-EYLDSLVENSKI 796
Score = 41 (19.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 22/114 (19%), Positives = 49/114 (42%)
Query: 73 LWDMGLQLFRKYLSSYSEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYSE 132
L D ++ R+YL + ++ K V GLL + L E L H + + +S+
Sbjct: 391 LLDKVVRPIRQYLKTREDIIIKLVHGLLDISPNNELIELARE--LRHPSNKYRSKHDHSK 448
Query: 133 SFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTR 186
+ L+ + + + ++ V D ++ + I + + + +++D TR
Sbjct: 449 DVLEDLLDLNWQPDPIDALPDFKKGKVSDIIESL-ISIFDSKD---IFIDEFTR 498
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 7/35 (20%), Positives = 18/35 (51%)
Query: 282 FSKNEAFCNTIKDAFEYLINLRQNRPAELIAKFLD 316
F+ + + A ++ +N++ + EL+ F+D
Sbjct: 321 FNSKQYELTLLSCAIDHSVNIQAAQRTELVNSFID 355
>UNIPROTKB|H7C399 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
EMBL:AC073052 EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3
ProteinModelPortal:H7C399 SMR:H7C399 Ensembl:ENST00000451538
Uniprot:H7C399
Length = 111
Score = 102 (41.0 bits), Expect = 0.00018, P = 0.00018
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 560 NEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLI 619
N F P+ + + + + ++T + + Q +Q+ I+ + R+ +T +
Sbjct: 14 NATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQM--TILMLFNNRE--KYTFEV 69
Query: 620 TELFQQLK--FPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
T QQLK F P +KKRIE LI+REYL R + ++Y Y+A
Sbjct: 70 T---QQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 111
>UNIPROTKB|E1BZJ5 [details] [associations]
symbol:Gga.16511 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 PROSITE:PS50069 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
InterPro:IPR008979 SUPFAM:SSF49785 SUPFAM:SSF75632
InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284 GO:GO:0031461
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 GeneTree:ENSGT00700000104406 EMBL:AADN02044223
EMBL:AADN02044224 IPI:IPI00591077 Ensembl:ENSGALT00000013964
OMA:DILPWHE Uniprot:E1BZJ5
Length = 1445
Score = 112 (44.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 68/288 (23%), Positives = 115/288 (39%)
Query: 402 LSKEINESFKQSSQARTKLPSG--IEMSVHVLTTGYWPTYPPMDVRLPHE-----LNVYQ 454
L E E+ +Q + P+ +E+ V VL+ WP P V P L+
Sbjct: 1128 LGTESPEAECPRAQVPGEAPAADALEVEVLVLSPRCWPVSPLCYVEEPRRFFPAALSSPL 1187
Query: 455 DIFKEFYLSKYS--G------RRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFN 506
D F +F+ S G RRL W LGH AE G L VS Q +L+ FN
Sbjct: 1188 DEFADFWRHSQSRPGWVCSRPRRLQW-TWLGH----AELRFGDCVLHVSTLQMYILLRFN 1242
Query: 507 DAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAP 566
A++++ + + ATG+ + + + L L G ++Q +G + N A
Sbjct: 1243 SAEEVAVEALLQATGLPAELVHQALAPLTHGDGILVQSCTQGAP----GALRLNRAALAH 1298
Query: 567 LYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELF--- 623
+ + + + + + + + R + I RI+K K L L+ ++
Sbjct: 1299 ASGRHLRLLPQQRYLRAERAESSALERKRNV-LCCLITRILKAEKQLHIDNLVFKVIDAC 1357
Query: 624 --------QQ-LKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 662
QQ L F D+ + L+++ YL R PQ+ Y++
Sbjct: 1358 EKGELGLGQQFLSFCCHSVDVLSCVLHLLNQGYLRRQDERPQVLEYVS 1405
Score = 68 (29.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 38/156 (24%), Positives = 65/156 (41%)
Query: 262 DMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFE----YLINLRQNRPAELIAKFLDE 317
D+V L E+ F + AF + F L L +E A++LD
Sbjct: 964 DVVEGYCALYRRLRGATEELFGQQAAFVAALGQGFAGALLQLSFLTALHVSERFARYLDR 1023
Query: 318 KLRA--GNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEK 375
K+R G G + + L+ L+ V+F ++ FE FY+ L RLL + + E
Sbjct: 1024 KVRELHGAAGGAGQ-LQQILEP-FVVFGGLEFAHTFEHFYRLYLGDRLLAQGPSWL--EG 1079
Query: 376 SMISKLKTECGSQFTNKL-EGMFKDIELSKEINESF 410
+ + ++ G F + + M D+ S+E+ F
Sbjct: 1080 AAVEQM----GLCFPRRFPQEMLSDLAASEELRRHF 1111
>UNIPROTKB|E1BZ07 [details] [associations]
symbol:Gga.16511 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 PROSITE:PS50069 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
InterPro:IPR008979 SUPFAM:SSF49785 SUPFAM:SSF75632
InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284 GO:GO:0031461
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 GeneTree:ENSGT00700000104406 EMBL:AADN02044223
EMBL:AADN02044224 IPI:IPI00818467 Ensembl:ENSGALT00000014083
Uniprot:E1BZ07
Length = 1420
Score = 111 (44.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 63/264 (23%), Positives = 106/264 (40%)
Query: 424 IEMSVHVLTTGYWPTYPPMDVRLPHE-----LNVYQDIFKEFYLSKYS--G------RRL 470
+E+ V VL+ WP P V P L+ D F +F+ S G RRL
Sbjct: 1127 LEVEVLVLSPRCWPVSPLCYVEEPRRFFPAALSSPLDEFADFWRHSQSRPGWVCSRPRRL 1186
Query: 471 MWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRT 530
W LGH AE G L VS Q +L+ FN A++++ + + ATG+ + + +
Sbjct: 1187 QW-TWLGH----AELRFGDCVLHVSTLQMYILLRFNSAEEVAVEALLQATGLPAELVHQA 1241
Query: 531 LQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTER 590
L L G ++Q +G + N A + + + + + +
Sbjct: 1242 LAPLTHGDGILVQSCTQGAP----GALRLNRAALAHASGRHLRLLPQQRYLRAERAESSA 1297
Query: 591 VFQDRQYQVDAAIVRIMKTRKVLSHTLLITELF-----------QQ-LKFPIKPADLKKR 638
+ + R + I RI+K K L L+ ++ QQ L F D+
Sbjct: 1298 LERKRNV-LCCLITRILKAEKQLHIDNLVFKVIDACEKGELGLGQQFLSFCCHSVDVLSC 1356
Query: 639 IESLIDREYLERDKNNPQIYNYLA 662
+ L+++ YL R PQ+ Y++
Sbjct: 1357 VLHLLNQGYLRRQDERPQVLEYVS 1380
Score = 68 (29.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 38/156 (24%), Positives = 65/156 (41%)
Query: 262 DMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFE----YLINLRQNRPAELIAKFLDE 317
D+V L E+ F + AF + F L L +E A++LD
Sbjct: 944 DVVEGYCALYRRLRGATEELFGQQAAFVAALGQGFAGALLQLSFLTALHVSERFARYLDR 1003
Query: 318 KLRA--GNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEK 375
K+R G G + + L+ L+ V+F ++ FE FY+ L RLL + + E
Sbjct: 1004 KVRELHGAAGGAGQ-LQQILEP-FVVFGGLEFAHTFEHFYRLYLGDRLLAQGPSWL--EG 1059
Query: 376 SMISKLKTECGSQFTNKL-EGMFKDIELSKEINESF 410
+ + ++ G F + + M D+ S+E+ F
Sbjct: 1060 AAVEQM----GLCFPRRFPQEMLSDLAASEELRRHF 1091
>DICTYBASE|DDB_G0276377 [details] [associations]
symbol:anapc2 "anaphase promoting complex subunit 2"
species:44689 "Dictyostelium discoideum" [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0016567 "protein ubiquitination" evidence=IEA;IC] [GO:0005829
"cytosol" evidence=ISS] [GO:0005680 "anaphase-promoting complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
UniPathway:UPA00143 dictyBase:DDB_G0276377 GO:GO:0005829
GO:GO:0051301 GO:GO:0007067 EMBL:AAFI02000014
GenomeReviews:CM000151_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0005680 KO:K03349 GO:GO:0031145
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
eggNOG:NOG306201 RefSeq:XP_643183.1 ProteinModelPortal:Q551S9
STRING:Q551S9 EnsemblProtists:DDB0234264 GeneID:8620454
KEGG:ddi:DDB_G0276377 OMA:NFIVISE ProtClustDB:CLSZ2729163
Uniprot:Q551S9
Length = 907
Score = 133 (51.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 48/192 (25%), Positives = 74/192 (38%)
Query: 322 GN-KGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISK 380
GN K + + + D + L G D+F Y+ L+ RLL +D E I
Sbjct: 545 GNAKANNNNKKKKKKDTISHLVNIYDGIDLFINEYRSMLSDRLLSVVDFDLDKEIKNIEL 604
Query: 381 LKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGI-------EMSVHVLTT 433
LK G E M KD+ SK +N K S + E +L+
Sbjct: 605 LKLRFGDSVLFNCEIMIKDMVDSKRLNLQIKNSQGVNNNNNNNNNNNNELKEFETLILSQ 664
Query: 434 GYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELA 493
+WPT + + P + I+ + Y + R+L+W+ LG L E +
Sbjct: 665 LFWPTLKGDEFKYPKSIEKKMQIYSKEYERIKTPRQLIWKQHLGLVDLDLEIGNNIQSFQ 724
Query: 494 VSLFQTVVLMLF 505
VS ++MLF
Sbjct: 725 VSPIHATLIMLF 736
Score = 40 (19.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 134 FEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHE 175
FE+ F+ T FY ++ + + + K +E ++ E
Sbjct: 176 FERDFISFTKSFYHSKKQILKDEEENNNNSKDLEFNDQQQEE 217
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 662 662 0.00097 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 130
No. of states in DFA: 612 (65 KB)
Total size of DFA: 329 KB (2167 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.08u 0.16s 60.24t Elapsed: 00:00:02
Total cpu time: 60.14u 0.16s 60.30t Elapsed: 00:00:02
Start: Sat May 11 09:56:03 2013 End: Sat May 11 09:56:05 2013
WARNINGS ISSUED: 1